Query 040392
Match_columns 470
No_of_seqs 362 out of 4047
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 12:39:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040392.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040392hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 4.6E-58 1.6E-62 436.6 14.6 259 173-454 13-290 (299)
2 3omv_A RAF proto-oncogene seri 100.0 4.5E-57 1.5E-61 429.9 19.8 263 172-455 35-302 (307)
3 4aoj_A High affinity nerve gro 100.0 2.7E-57 9.3E-62 437.1 18.2 258 173-453 41-319 (329)
4 4gt4_A Tyrosine-protein kinase 100.0 3.7E-57 1.3E-61 432.2 14.8 256 174-452 27-305 (308)
5 4fih_A Serine/threonine-protei 100.0 7E-55 2.4E-59 419.9 19.4 250 173-447 74-324 (346)
6 4g3f_A NF-kappa-beta-inducing 100.0 1.4E-54 5E-59 416.5 19.9 255 173-454 58-317 (336)
7 4b9d_A Serine/threonine-protei 100.0 4.3E-55 1.5E-59 422.0 16.2 251 172-447 23-277 (350)
8 4ase_A Vascular endothelial gr 100.0 7.2E-55 2.4E-59 423.6 15.6 267 166-454 57-348 (353)
9 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.5E-55 1.2E-59 415.9 13.0 251 172-447 31-285 (311)
10 3hmm_A TGF-beta receptor type- 100.0 2.6E-54 8.7E-59 413.3 18.1 276 173-453 3-297 (303)
11 3fpq_A Serine/threonine-protei 100.0 8.8E-54 3E-58 404.3 20.8 245 176-447 29-283 (290)
12 4fie_A Serine/threonine-protei 100.0 1.3E-53 4.3E-58 421.1 20.0 250 173-447 151-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 1.3E-53 4.5E-58 399.6 15.9 246 173-447 13-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 8.4E-54 2.9E-58 406.3 11.1 248 173-447 24-282 (304)
15 4g31_A Eukaryotic translation 100.0 6.8E-52 2.3E-56 394.7 15.3 250 173-447 5-280 (299)
16 4b99_A Mitogen-activated prote 100.0 7.2E-49 2.5E-53 387.8 18.7 270 172-447 53-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.2E-48 4E-53 382.3 19.4 269 170-447 18-353 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 3.2E-48 1.1E-52 401.4 18.1 253 172-447 156-411 (573)
19 2qkw_B Protein kinase; three-h 100.0 5.9E-47 2E-51 366.7 22.6 278 167-453 33-315 (321)
20 3v5w_A G-protein coupled recep 100.0 2.7E-47 9.3E-52 392.4 21.3 250 172-447 188-450 (689)
21 3uim_A Brassinosteroid insensi 100.0 4.7E-47 1.6E-51 368.1 19.5 284 158-451 15-309 (326)
22 3s95_A LIMK-1, LIM domain kina 100.0 2.6E-46 8.9E-51 360.3 22.1 266 172-458 9-287 (310)
23 3soc_A Activin receptor type-2 100.0 2.2E-46 7.5E-51 362.8 18.0 276 172-454 23-319 (322)
24 3fxz_A Serine/threonine-protei 100.0 9.3E-46 3.2E-50 354.2 21.4 251 172-447 19-270 (297)
25 2psq_A Fibroblast growth facto 100.0 5.7E-46 1.9E-50 366.6 19.9 261 172-455 80-366 (370)
26 3cbl_A C-FES, proto-oncogene t 100.0 1.4E-46 4.9E-51 372.0 13.7 260 172-454 113-375 (377)
27 2nru_A Interleukin-1 receptor- 100.0 2E-44 6.8E-49 346.5 27.2 282 159-453 11-306 (307)
28 3p86_A Serine/threonine-protei 100.0 6.9E-46 2.4E-50 357.0 16.5 261 170-455 34-300 (309)
29 3kul_A Ephrin type-A receptor 100.0 1.2E-45 4.1E-50 358.0 17.0 260 172-454 48-314 (325)
30 4hcu_A Tyrosine-protein kinase 100.0 2.8E-45 9.6E-50 345.7 18.6 257 172-453 9-266 (269)
31 3vhe_A Vascular endothelial gr 100.0 1.9E-45 6.7E-50 361.5 17.8 271 162-454 11-356 (359)
32 3ugc_A Tyrosine-protein kinase 100.0 6.8E-46 2.3E-50 354.8 13.4 276 172-455 9-293 (295)
33 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.4E-45 8.2E-50 345.9 16.9 257 172-453 7-264 (268)
34 3tki_A Serine/threonine-protei 100.0 3.4E-45 1.1E-49 354.5 18.2 254 172-447 6-262 (323)
35 3lb7_A RAF proto-oncogene seri 100.0 5E-45 1.7E-49 350.8 19.0 264 171-455 34-302 (307)
36 3fe3_A MAP/microtubule affinit 100.0 6.1E-45 2.1E-49 353.1 18.6 248 172-447 14-265 (328)
37 2qol_A Ephrin receptor; recept 100.0 3E-45 1E-49 361.7 16.4 260 172-454 44-310 (373)
38 2c30_A Serine/threonine-protei 100.0 2.3E-44 7.9E-49 348.4 22.0 261 162-447 24-295 (321)
39 3gen_A Tyrosine-protein kinase 100.0 4.2E-45 1.4E-49 347.1 16.4 257 172-453 23-280 (283)
40 3zgw_A Maternal embryonic leuc 100.0 9.1E-45 3.1E-49 354.0 18.8 252 171-448 8-262 (347)
41 3q4u_A Activin receptor type-1 100.0 3.2E-44 1.1E-48 344.0 22.3 265 172-451 7-300 (301)
42 3niz_A Rhodanese family protei 100.0 3.1E-44 1.1E-48 345.9 21.9 269 171-447 19-301 (311)
43 1luf_A Muscle-specific tyrosin 100.0 2.6E-45 8.8E-50 358.3 14.3 265 170-457 44-339 (343)
44 3tt0_A Basic fibroblast growth 100.0 2.2E-44 7.4E-49 357.1 20.8 264 172-458 68-357 (382)
45 1tki_A Titin; serine kinase, m 100.0 1.3E-44 4.5E-49 349.9 17.9 253 172-448 4-259 (321)
46 3poz_A Epidermal growth factor 100.0 6E-45 2E-49 353.5 15.4 258 172-453 14-278 (327)
47 1t46_A HOMO sapiens V-KIT hard 100.0 1.7E-44 5.9E-49 347.8 18.5 262 172-455 22-309 (313)
48 1rjb_A FL cytokine receptor; k 100.0 1.7E-44 5.7E-49 352.8 18.4 264 171-456 43-337 (344)
49 2ivs_A Proto-oncogene tyrosine 100.0 1.3E-44 4.6E-49 348.7 16.7 259 172-453 22-311 (314)
50 1o6l_A RAC-beta serine/threoni 100.0 4.9E-44 1.7E-48 347.7 20.6 249 172-447 4-261 (337)
51 4eqm_A Protein kinase; transfe 100.0 4.3E-44 1.5E-48 342.2 19.6 260 172-452 10-274 (294)
52 3l9p_A Anaplastic lymphoma kin 100.0 1.2E-44 4E-49 356.9 16.0 260 172-454 70-346 (367)
53 2yab_A Death-associated protei 100.0 4.1E-44 1.4E-48 351.4 19.8 252 172-447 11-273 (361)
54 3og7_A AKAP9-BRAF fusion prote 100.0 2.5E-44 8.5E-49 343.0 17.8 259 172-452 23-287 (289)
55 3mdy_A Bone morphogenetic prot 100.0 3.1E-43 1.1E-47 342.7 25.8 270 167-454 31-332 (337)
56 4f0f_A Serine/threonine-protei 100.0 1.3E-43 4.4E-48 337.5 22.5 253 172-451 18-287 (287)
57 2izr_A Casein kinase I isoform 100.0 6.2E-44 2.1E-48 346.8 20.2 264 172-457 8-285 (330)
58 1csn_A Casein kinase-1; phosph 100.0 1.6E-43 5.5E-48 338.6 22.3 266 172-458 9-288 (298)
59 3kex_A Receptor tyrosine-prote 100.0 1E-44 3.6E-49 351.5 14.2 258 172-453 12-276 (325)
60 1k9a_A Carboxyl-terminal SRC k 100.0 4.3E-44 1.5E-48 362.3 19.1 252 172-454 192-446 (450)
61 4aw2_A Serine/threonine-protei 100.0 5E-45 1.7E-49 365.9 12.0 261 167-447 68-339 (437)
62 1ob3_A PFPK5, cell division co 100.0 3.8E-44 1.3E-48 341.5 17.5 268 173-447 2-281 (288)
63 3h4j_B AMPK kdaid, SNF1-like p 100.0 3E-44 1E-48 348.9 17.0 247 172-447 8-259 (336)
64 3t9t_A Tyrosine-protein kinase 100.0 5.2E-44 1.8E-48 336.4 18.0 257 172-453 7-264 (267)
65 3op5_A Serine/threonine-protei 100.0 2.4E-44 8.1E-49 354.6 16.2 273 172-458 34-334 (364)
66 3o0g_A Cell division protein k 100.0 8.5E-44 2.9E-48 339.8 19.5 269 173-447 2-283 (292)
67 3qup_A Tyrosine-protein kinase 100.0 4.4E-44 1.5E-48 346.7 17.8 261 171-454 21-299 (323)
68 1mp8_A Focal adhesion kinase 1 100.0 2.8E-44 9.7E-49 341.1 16.0 259 172-455 14-278 (281)
69 4euu_A Serine/threonine-protei 100.0 1.1E-43 3.8E-48 343.4 20.4 274 172-451 8-307 (319)
70 2xir_A Vascular endothelial gr 100.0 6.6E-44 2.3E-48 344.2 18.2 270 164-455 18-312 (316)
71 1qcf_A Haematopoetic cell kina 100.0 6.6E-45 2.3E-49 368.8 11.7 260 169-454 184-445 (454)
72 2y0a_A Death-associated protei 100.0 9.1E-44 3.1E-48 344.9 18.8 252 172-447 10-272 (326)
73 3kmu_A ILK, integrin-linked ki 100.0 1.1E-43 3.6E-48 334.9 18.4 252 172-453 9-270 (271)
74 1kob_A Twitchin; kinase, intra 100.0 5.9E-44 2E-48 353.4 17.4 253 172-447 50-305 (387)
75 3dtc_A Mitogen-activated prote 100.0 5.7E-44 1.9E-48 337.0 16.4 251 172-451 6-271 (271)
76 2i1m_A Macrophage colony-stimu 100.0 6.1E-44 2.1E-48 347.3 16.6 267 169-457 42-330 (333)
77 3c0i_A Peripheral plasma membr 100.0 4.3E-44 1.5E-48 350.8 15.6 253 172-447 23-287 (351)
78 2pvf_A Fibroblast growth facto 100.0 2.1E-43 7.1E-48 343.7 20.2 262 172-456 34-321 (334)
79 3g2f_A Bone morphogenetic prot 100.0 9.5E-44 3.2E-48 346.3 17.4 281 172-461 12-326 (336)
80 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.8E-44 2E-48 349.4 15.9 250 171-447 21-281 (353)
81 4e5w_A Tyrosine-protein kinase 100.0 4.4E-44 1.5E-48 343.2 14.6 262 173-452 21-301 (302)
82 3gni_B Strad alpha; kinase fol 100.0 1.5E-43 5.3E-48 351.9 19.0 272 172-447 24-334 (389)
83 2eva_A TAK1 kinase - TAB1 chim 100.0 3.9E-43 1.3E-47 337.7 21.2 255 173-455 8-265 (307)
84 3dbq_A Dual specificity protei 100.0 6.9E-44 2.3E-48 348.4 16.0 253 172-448 8-275 (343)
85 4fvq_A Tyrosine-protein kinase 100.0 3.6E-44 1.2E-48 341.6 13.7 253 172-454 7-276 (289)
86 3soa_A Calcium/calmodulin-depe 100.0 8.2E-44 2.8E-48 358.3 16.9 254 171-447 9-268 (444)
87 2zv2_A Calcium/calmodulin-depe 100.0 2.2E-43 7.5E-48 337.9 18.9 250 172-447 12-293 (298)
88 2yex_A Serine/threonine-protei 100.0 2.6E-43 8.7E-48 333.4 19.1 254 172-447 6-262 (276)
89 2bdw_A Hypothetical protein K1 100.0 1.2E-43 4.1E-48 348.8 17.4 252 172-447 28-285 (362)
90 3lzb_A Epidermal growth factor 100.0 1.3E-43 4.4E-48 344.1 17.4 259 172-454 14-279 (327)
91 1u59_A Tyrosine-protein kinase 100.0 4.2E-43 1.4E-47 334.1 20.4 263 173-459 9-278 (287)
92 1fot_A TPK1 delta, CAMP-depend 100.0 3.8E-43 1.3E-47 339.0 20.2 246 172-447 5-259 (318)
93 4dc2_A Protein kinase C IOTA t 100.0 9.4E-44 3.2E-48 352.2 16.3 254 172-447 51-319 (396)
94 4fr4_A YANK1, serine/threonine 100.0 5.8E-43 2E-47 345.3 21.8 250 172-446 14-271 (384)
95 1b6c_B TGF-B superfamily recep 100.0 1.3E-42 4.5E-47 339.0 24.0 274 166-454 35-337 (342)
96 2pmi_A Negative RE, cyclin-dep 100.0 4E-43 1.4E-47 339.2 20.0 269 172-447 4-294 (317)
97 1p4o_A Insulin-like growth fac 100.0 4.9E-44 1.7E-48 346.2 13.4 265 166-453 18-299 (322)
98 3lxl_A Tyrosine-protein kinase 100.0 4.2E-44 1.4E-48 347.6 12.9 275 172-455 22-305 (327)
99 3cok_A Serine/threonine-protei 100.0 1.6E-43 5.4E-48 335.3 16.6 250 172-447 10-263 (278)
100 2w1i_A JAK2; chromosomal rearr 100.0 1.1E-43 3.7E-48 344.5 15.7 273 172-456 40-325 (326)
101 3brb_A Proto-oncogene tyrosine 100.0 1.8E-43 6.1E-48 340.9 17.1 262 171-455 32-310 (313)
102 1opk_A P150, C-ABL, proto-onco 100.0 6.9E-44 2.4E-48 364.8 14.9 256 172-452 219-477 (495)
103 3f66_A Hepatocyte growth facto 100.0 3.4E-43 1.2E-47 336.5 18.6 262 172-456 24-294 (298)
104 3lxp_A Non-receptor tyrosine-p 100.0 1E-43 3.4E-48 343.5 15.0 273 175-458 33-315 (318)
105 2x4f_A Myosin light chain kina 100.0 1.3E-43 4.3E-48 350.0 15.9 247 178-447 94-343 (373)
106 2zmd_A Dual specificity protei 100.0 2.2E-43 7.7E-48 350.4 17.8 251 173-447 56-321 (390)
107 3cc6_A Protein tyrosine kinase 100.0 3.3E-43 1.1E-47 333.8 18.1 259 172-455 11-275 (281)
108 3c1x_A Hepatocyte growth facto 100.0 6.7E-44 2.3E-48 351.8 13.8 261 174-457 90-359 (373)
109 2w4o_A Calcium/calmodulin-depe 100.0 3.8E-43 1.3E-47 343.7 18.9 252 171-447 51-306 (349)
110 3qd2_B Eukaryotic translation 100.0 1.7E-43 5.7E-48 343.6 16.3 251 172-447 5-326 (332)
111 3v8s_A RHO-associated protein 100.0 6.3E-44 2.2E-48 355.2 13.4 258 167-447 63-330 (410)
112 3uc3_A Serine/threonine-protei 100.0 4.2E-43 1.4E-47 344.9 19.0 253 172-447 19-275 (361)
113 3pls_A Macrophage-stimulating 100.0 5.8E-43 2E-47 334.7 19.5 261 174-456 22-290 (298)
114 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.4E-44 2.2E-48 361.2 13.6 258 171-454 182-441 (452)
115 2buj_A Serine/threonine-protei 100.0 3.2E-43 1.1E-47 339.7 17.8 261 171-452 27-305 (317)
116 1xjd_A Protein kinase C, theta 100.0 9.2E-44 3.1E-48 346.8 14.0 250 170-446 14-269 (345)
117 3a62_A Ribosomal protein S6 ki 100.0 2.4E-43 8.2E-48 342.1 16.8 249 172-447 16-277 (327)
118 1qpc_A LCK kinase; alpha beta 100.0 1.2E-43 3.9E-48 336.5 14.3 258 172-455 12-271 (279)
119 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.5E-43 8.6E-48 344.7 16.8 246 172-447 40-294 (350)
120 1mqb_A Ephrin type-A receptor 100.0 2.8E-43 9.5E-48 342.6 17.0 259 173-454 44-310 (333)
121 2wqm_A Serine/threonine-protei 100.0 1.5E-42 5E-47 334.0 21.6 262 172-455 31-299 (310)
122 2h34_A Serine/threonine-protei 100.0 3.4E-43 1.2E-47 338.4 17.1 270 171-463 32-306 (309)
123 3p1a_A MYT1 kinase, membrane-a 100.0 2.7E-43 9.2E-48 339.4 16.4 245 173-447 57-305 (311)
124 4hgt_A Casein kinase I isoform 100.0 1.2E-42 4.1E-47 332.1 20.7 266 171-457 7-284 (296)
125 3mtl_A Cell division protein k 100.0 2.8E-43 9.7E-48 341.2 16.6 267 173-447 2-282 (324)
126 2vd5_A DMPK protein; serine/th 100.0 3.8E-43 1.3E-47 349.9 17.8 260 167-447 55-328 (412)
127 3ork_A Serine/threonine protei 100.0 9E-44 3.1E-48 342.8 12.9 259 172-451 11-279 (311)
128 2v62_A Serine/threonine-protei 100.0 9.8E-44 3.4E-48 347.6 12.9 266 172-452 36-327 (345)
129 3a8x_A Protein kinase C IOTA t 100.0 9.1E-43 3.1E-47 340.1 19.7 254 172-447 8-276 (345)
130 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.9E-43 2.4E-47 344.2 19.0 253 171-454 63-340 (365)
131 3gxj_A TGF-beta receptor type- 100.0 2.2E-44 7.5E-49 345.3 8.1 267 172-453 2-297 (303)
132 3kfa_A Tyrosine-protein kinase 100.0 3.1E-43 1E-47 335.0 15.9 259 171-454 11-272 (288)
133 3fdn_A Serine/threonine-protei 100.0 5.4E-43 1.9E-47 331.9 17.3 248 172-448 8-259 (279)
134 2jii_A Serine/threonine-protei 100.0 2.2E-43 7.7E-48 346.0 15.1 267 172-457 41-340 (352)
135 2i0e_A Protein kinase C-beta I 100.0 4.2E-43 1.4E-47 343.2 16.7 250 171-447 18-277 (353)
136 3f3z_A Calcium/calmodulin-depe 100.0 9.5E-43 3.3E-47 329.8 18.6 251 172-447 8-262 (277)
137 3uzp_A CKI-delta, CKID, casein 100.0 2.7E-42 9.2E-47 329.8 21.5 265 172-457 8-284 (296)
138 3hko_A Calcium/calmodulin-depe 100.0 6.3E-43 2.1E-47 341.7 17.1 261 167-447 20-331 (345)
139 2a2a_A Death-associated protei 100.0 1.1E-42 3.9E-47 336.6 18.5 252 172-447 11-273 (321)
140 2yfx_A Tyrosine-protein kinase 100.0 8.4E-43 2.9E-47 338.4 17.7 262 172-456 29-307 (327)
141 3kk8_A Calcium/calmodulin depe 100.0 8.6E-43 2.9E-47 331.3 17.3 252 172-447 5-262 (284)
142 2ozo_A Tyrosine-protein kinase 100.0 4.7E-43 1.6E-47 367.0 16.9 256 180-459 343-604 (613)
143 4agu_A Cyclin-dependent kinase 100.0 1.5E-42 5.1E-47 334.1 18.7 265 173-447 3-285 (311)
144 4eut_A Serine/threonine-protei 100.0 6.5E-43 2.2E-47 348.1 16.7 276 172-453 8-309 (396)
145 3g33_A Cell division protein k 100.0 1.9E-42 6.5E-47 333.0 19.3 269 171-447 7-297 (308)
146 2y94_A 5'-AMP-activated protei 100.0 1.9E-42 6.4E-47 350.7 19.9 248 172-447 15-267 (476)
147 1u5q_A Serine/threonine protei 100.0 8.9E-43 3E-47 340.8 16.9 247 173-448 54-307 (348)
148 3kn6_A Ribosomal protein S6 ki 100.0 9.5E-43 3.2E-47 337.6 16.8 249 178-447 16-271 (325)
149 3oz6_A Mitogen-activated prote 100.0 9.8E-43 3.4E-47 346.0 17.3 269 171-447 7-329 (388)
150 1fvr_A Tyrosine-protein kinase 100.0 6.3E-43 2.2E-47 339.3 15.5 262 173-460 25-307 (327)
151 3dls_A PAS domain-containing s 100.0 6.9E-43 2.3E-47 339.9 15.7 243 171-447 22-275 (335)
152 2eue_A Carbon catabolite derep 100.0 1.8E-42 6.3E-47 327.5 18.0 247 172-447 12-263 (275)
153 1byg_A CSK, protein (C-termina 100.0 5.1E-43 1.7E-47 331.9 14.1 252 172-454 20-274 (278)
154 2ac3_A MAP kinase-interacting 100.0 7.7E-43 2.6E-47 336.9 15.5 269 172-447 11-296 (316)
155 4ejn_A RAC-alpha serine/threon 100.0 5.3E-43 1.8E-47 354.2 15.0 249 172-447 147-405 (446)
156 3is5_A Calcium-dependent prote 100.0 1.5E-42 5.2E-47 329.9 17.0 251 172-447 21-279 (285)
157 1xbb_A Tyrosine-protein kinase 100.0 3E-42 1E-46 328.9 18.6 262 172-458 15-284 (291)
158 1t4h_A Serine/threonine-protei 100.0 6.4E-42 2.2E-46 326.4 20.8 247 174-447 27-283 (290)
159 3bhy_A Death-associated protei 100.0 3E-42 1E-46 327.4 18.1 257 172-452 4-273 (283)
160 3llt_A Serine/threonine kinase 100.0 2.5E-42 8.5E-47 339.6 17.9 274 163-447 25-356 (360)
161 2h8h_A Proto-oncogene tyrosine 100.0 2.7E-43 9.1E-48 363.7 11.5 258 171-454 265-524 (535)
162 3ll6_A Cyclin G-associated kin 100.0 2.5E-42 8.6E-47 336.0 17.7 256 172-454 27-309 (337)
163 2jam_A Calcium/calmodulin-depe 100.0 1.5E-42 5E-47 333.1 15.6 251 172-447 8-262 (304)
164 2a19_B Interferon-induced, dou 100.0 3.1E-42 1.1E-46 327.2 17.5 250 172-456 10-277 (284)
165 1ua2_A CAK, cell division prot 100.0 2.5E-42 8.4E-47 337.8 17.0 271 169-447 6-292 (346)
166 2j7t_A Serine/threonine-protei 100.0 1.1E-42 3.7E-47 333.6 14.2 253 172-447 18-276 (302)
167 2clq_A Mitogen-activated prote 100.0 5.8E-42 2E-46 327.3 19.1 252 173-447 22-279 (295)
168 3pg1_A Mitogen-activated prote 100.0 4.4E-42 1.5E-46 338.1 18.8 275 165-447 14-317 (362)
169 3i6u_A CDS1, serine/threonine- 100.0 7.5E-42 2.6E-46 342.6 20.8 254 170-447 132-400 (419)
170 3ttj_A Mitogen-activated prote 100.0 3.6E-42 1.2E-46 348.9 18.6 262 172-447 61-356 (464)
171 2acx_A G protein-coupled recep 100.0 5.2E-42 1.8E-46 352.3 19.9 251 172-447 183-445 (576)
172 3n9x_A Phosphotransferase; mal 100.0 4.6E-42 1.6E-46 345.7 19.1 201 172-377 25-254 (432)
173 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.1E-42 7.2E-47 335.8 16.0 271 169-447 30-319 (329)
174 3com_A Serine/threonine-protei 100.0 6.2E-42 2.1E-46 330.2 19.1 252 171-447 27-279 (314)
175 2r5t_A Serine/threonine-protei 100.0 2.4E-42 8.1E-47 340.2 16.3 246 172-444 37-287 (373)
176 1nxk_A MAP kinase-activated pr 100.0 1.1E-41 3.7E-46 339.3 21.2 251 172-448 60-323 (400)
177 2vgo_A Serine/threonine-protei 100.0 3.9E-42 1.3E-46 326.9 17.2 247 172-447 13-263 (284)
178 2qr7_A Ribosomal protein S6 ki 100.0 1.9E-42 6.5E-47 337.5 15.2 253 171-447 20-278 (342)
179 2rku_A Serine/threonine-protei 100.0 3.4E-42 1.1E-46 329.0 16.7 249 172-447 14-266 (294)
180 1u46_A ACK-1, activated CDC42 100.0 1.3E-42 4.3E-47 331.2 13.5 260 172-454 17-285 (291)
181 3nsz_A CK II alpha, casein kin 100.0 5.9E-42 2E-46 332.8 18.4 263 172-447 35-320 (330)
182 2pml_X PFPK7, Ser/Thr protein 100.0 4.1E-42 1.4E-46 336.4 17.4 265 172-447 30-323 (348)
183 3fme_A Dual specificity mitoge 100.0 3.1E-42 1.1E-46 328.3 15.9 251 172-447 6-267 (290)
184 2vwi_A Serine/threonine-protei 100.0 1.7E-42 5.9E-47 332.1 14.0 264 170-447 12-288 (303)
185 3byv_A Rhoptry kinase; malaria 100.0 6.1E-43 2.1E-47 346.1 11.1 248 172-454 72-369 (377)
186 3eqc_A Dual specificity mitoge 100.0 2.3E-42 7.9E-47 339.8 15.1 265 172-448 32-326 (360)
187 4aaa_A Cyclin-dependent kinase 100.0 2.9E-42 9.8E-47 335.2 15.5 268 172-447 24-307 (331)
188 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-41 3.6E-46 349.2 20.5 253 173-447 185-449 (543)
189 3rp9_A Mitogen-activated prote 100.0 6.2E-42 2.1E-46 347.6 18.6 195 172-371 52-280 (458)
190 3a7i_A MST3 kinase, serine/thr 100.0 1.4E-41 4.6E-46 326.2 19.7 250 172-448 21-272 (303)
191 2owb_A Serine/threonine-protei 100.0 3.7E-42 1.3E-46 335.0 15.9 249 172-447 40-292 (335)
192 3mwu_A Calmodulin-domain prote 100.0 4.5E-42 1.6E-46 351.1 17.3 251 172-447 21-277 (486)
193 3mi9_A Cell division protein k 100.0 1.5E-41 5E-46 333.0 20.2 271 172-447 16-312 (351)
194 2y7j_A Phosphorylase B kinase 100.0 8E-42 2.7E-46 336.4 18.1 255 169-447 90-360 (365)
195 2h6d_A 5'-AMP-activated protei 100.0 7E-42 2.4E-46 323.6 16.9 248 172-447 10-262 (276)
196 3an0_A Dual specificity mitoge 100.0 6.8E-42 2.3E-46 333.8 17.2 252 171-447 49-311 (340)
197 4fl3_A Tyrosine-protein kinase 100.0 3.4E-42 1.2E-46 361.4 16.0 252 179-455 375-633 (635)
198 2w5a_A Serine/threonine-protei 100.0 2.7E-42 9.3E-47 326.9 13.8 253 172-449 5-270 (279)
199 1vzo_A Ribosomal protein S6 ki 100.0 5.9E-42 2E-46 336.1 16.2 255 172-448 53-323 (355)
200 1x8b_A WEE1HU, WEE1-like prote 100.0 1.4E-41 4.9E-46 323.1 18.4 244 172-447 10-280 (289)
201 3nyv_A Calmodulin-domain prote 100.0 2.9E-42 9.9E-47 352.6 14.5 250 172-447 25-282 (484)
202 3sv0_A Casein kinase I-like; t 100.0 5.2E-41 1.8E-45 340.7 23.3 263 172-455 6-280 (483)
203 3eb0_A Putative uncharacterize 100.0 2.4E-41 8.1E-46 335.4 20.3 272 169-453 3-330 (383)
204 2r3i_A Cell division protein k 100.0 2.1E-41 7.1E-46 324.2 18.7 268 173-447 3-284 (299)
205 3lij_A Calcium/calmodulin depe 100.0 7.3E-42 2.5E-46 350.2 16.5 255 172-451 36-298 (494)
206 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-41 5.4E-46 348.6 18.8 252 171-447 34-302 (504)
207 3cek_A Dual specificity protei 100.0 1.1E-41 3.7E-46 328.5 16.4 255 170-448 25-294 (313)
208 1cm8_A Phosphorylated MAP kina 100.0 8.1E-42 2.8E-46 336.5 15.8 264 172-447 24-308 (367)
209 3q60_A ROP5B; pseudokinase, tr 100.0 2.5E-42 8.6E-47 341.0 12.1 261 172-453 61-361 (371)
210 2wtk_C Serine/threonine-protei 100.0 2.5E-41 8.4E-46 324.6 18.5 251 172-447 4-264 (305)
211 3lm5_A Serine/threonine-protei 100.0 1.4E-41 4.6E-46 329.9 16.5 256 169-447 24-288 (327)
212 2x7f_A TRAF2 and NCK-interacti 100.0 7.8E-42 2.7E-46 331.3 14.6 256 167-447 18-287 (326)
213 2xrw_A Mitogen-activated prote 100.0 4.6E-41 1.6E-45 331.9 20.0 262 172-447 24-319 (371)
214 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.4E-42 8.3E-47 333.8 10.5 263 170-457 30-306 (319)
215 2ycf_A Serine/threonine-protei 100.0 4.8E-41 1.7E-45 325.3 19.2 252 172-447 9-275 (322)
216 1phk_A Phosphorylase kinase; g 100.0 2.6E-41 9E-46 323.3 16.6 253 171-447 15-284 (298)
217 3pfq_A PKC-B, PKC-beta, protei 100.0 2.4E-41 8.2E-46 357.3 17.7 250 171-447 339-598 (674)
218 2i6l_A Mitogen-activated prote 100.0 2.3E-41 7.8E-46 326.8 15.8 268 172-447 10-306 (320)
219 3qyz_A Mitogen-activated prote 100.0 4.1E-41 1.4E-45 331.4 17.7 268 172-447 26-314 (364)
220 2j0j_A Focal adhesion kinase 1 100.0 1.9E-41 6.4E-46 357.1 16.1 259 171-454 388-652 (656)
221 1wak_A Serine/threonine-protei 100.0 2.8E-41 9.7E-46 336.2 16.1 266 172-447 36-392 (397)
222 3kvw_A DYRK2, dual specificity 100.0 8.2E-41 2.8E-45 336.0 19.3 265 172-447 96-409 (429)
223 1zy4_A Serine/threonine-protei 100.0 4.5E-41 1.5E-45 322.1 16.6 253 172-447 5-284 (303)
224 1blx_A Cyclin-dependent kinase 100.0 1.2E-40 4.3E-45 322.8 19.4 269 171-447 9-297 (326)
225 2fst_X Mitogen-activated prote 100.0 1.8E-41 6.2E-46 333.8 13.4 263 172-447 28-312 (367)
226 2b9h_A MAP kinase FUS3, mitoge 100.0 6.6E-41 2.2E-45 328.5 17.0 269 172-447 10-306 (353)
227 4e7w_A Glycogen synthase kinas 100.0 8.7E-41 3E-45 332.3 17.5 264 172-447 39-322 (394)
228 2wei_A Calmodulin-domain prote 100.0 8.1E-41 2.8E-45 318.3 16.0 251 171-447 20-277 (287)
229 4exu_A Mitogen-activated prote 100.0 7.6E-41 2.6E-45 330.3 16.2 263 172-447 41-324 (371)
230 1j1b_A Glycogen synthase kinas 100.0 2.1E-40 7.2E-45 332.3 19.5 262 173-447 54-337 (420)
231 3e3p_A Protein kinase, putativ 100.0 4.5E-40 1.6E-44 323.4 21.1 275 166-447 16-315 (360)
232 1z57_A Dual specificity protei 100.0 1.6E-40 5.4E-45 323.4 17.1 265 172-447 13-329 (339)
233 3aln_A Dual specificity mitoge 100.0 1.7E-40 5.7E-45 322.2 17.0 254 172-447 21-286 (327)
234 3rgf_A Cyclin-dependent kinase 100.0 3.8E-40 1.3E-44 329.2 19.1 269 173-447 20-334 (405)
235 3fhr_A MAP kinase-activated pr 100.0 1.7E-40 5.8E-45 323.3 15.1 253 172-448 27-289 (336)
236 2dyl_A Dual specificity mitoge 100.0 2.8E-40 9.5E-45 319.1 15.9 252 172-447 24-284 (318)
237 2rio_A Serine/threonine-protei 100.0 2.5E-40 8.7E-45 333.1 16.1 251 174-447 16-296 (434)
238 3p23_A Serine/threonine-protei 100.0 2E-40 7E-45 333.0 14.5 250 173-447 24-284 (432)
239 3coi_A Mitogen-activated prote 100.0 2.7E-40 9.1E-45 324.2 14.8 263 172-447 23-306 (353)
240 1q8y_A SR protein kinase; tran 100.0 2.7E-40 9.2E-45 326.5 14.0 266 172-447 18-334 (373)
241 2vx3_A Dual specificity tyrosi 100.0 1.4E-39 4.9E-44 322.5 18.9 200 171-378 52-261 (382)
242 2eu9_A Dual specificity protei 100.0 2E-39 6.8E-44 317.8 19.5 265 172-447 18-334 (355)
243 2iwi_A Serine/threonine-protei 100.0 1.7E-40 5.9E-45 319.9 11.1 245 168-447 26-284 (312)
244 3a99_A Proto-oncogene serine/t 100.0 1.5E-40 5E-45 321.6 9.9 244 169-447 39-294 (320)
245 3qa8_A MGC80376 protein; kinas 100.0 2E-39 6.8E-44 336.5 14.3 271 172-452 13-308 (676)
246 3uqc_A Probable conserved tran 100.0 1.4E-38 4.6E-43 302.6 18.9 233 172-454 30-266 (286)
247 3m2w_A MAP kinase-activated pr 100.0 4.2E-38 1.4E-42 301.4 18.8 231 172-447 16-257 (299)
248 2pzi_A Probable serine/threoni 100.0 1.6E-38 5.5E-43 337.5 16.4 242 172-454 79-329 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 1.2E-38 4.2E-43 318.7 11.8 248 172-454 77-373 (413)
250 2vuw_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42 304.5 6.1 245 172-447 19-332 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.1E-30 3.7E-35 270.3 7.1 184 181-374 242-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 2.5E-27 8.6E-32 243.7 8.6 186 176-376 339-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1.6E-24 5.6E-29 204.6 7.3 149 169-348 86-252 (282)
254 1zth_A RIO1 serine protein kin 99.8 2.9E-20 9.8E-25 173.3 6.8 137 175-323 49-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.7 3.4E-18 1.2E-22 165.7 6.4 137 173-323 95-265 (397)
256 3rgz_A Protein brassinosteroid 99.5 4.1E-14 1.4E-18 152.1 9.1 108 1-111 647-754 (768)
257 2wfh_A SLIT homolog 2 protein 99.5 1.4E-13 4.8E-18 122.0 9.7 94 2-95 46-140 (193)
258 2r9u_A Variable lymphocyte rec 99.5 2E-13 6.9E-18 118.8 10.0 93 2-96 27-120 (174)
259 3g39_A Variable lymphocyte rec 99.5 2.3E-13 8E-18 118.0 10.2 93 2-96 24-117 (170)
260 3tm0_A Aminoglycoside 3'-phosp 99.4 5.4E-13 1.8E-17 124.2 11.1 146 169-321 10-212 (263)
261 1w8a_A SLIT protein; signaling 99.4 3.6E-13 1.2E-17 119.3 8.6 90 6-95 50-140 (192)
262 2v70_A SLIT-2, SLIT homolog 2 99.4 1.2E-12 4E-17 118.6 9.7 89 6-94 53-142 (220)
263 2v9t_B SLIT homolog 2 protein 99.4 1.4E-12 4.7E-17 118.1 10.0 90 5-94 51-141 (220)
264 2ifg_A High affinity nerve gro 99.4 1E-12 3.4E-17 127.7 8.8 93 2-95 24-117 (347)
265 1ogq_A PGIP-2, polygalacturona 99.4 8E-13 2.7E-17 126.5 7.9 96 2-98 213-308 (313)
266 2o6r_A Variable lymphocyte rec 99.3 4.7E-12 1.6E-16 110.4 10.4 84 10-93 28-112 (177)
267 1nd4_A Aminoglycoside 3'-phosp 99.3 7.7E-12 2.6E-16 116.0 10.3 136 174-321 21-213 (264)
268 3e6j_A Variable lymphocyte rec 99.3 8.3E-12 2.8E-16 113.7 10.0 92 3-94 57-148 (229)
269 3oja_A Leucine-rich immune mol 99.3 1.2E-13 4E-18 140.6 -3.2 90 3-94 137-227 (487)
270 2o6s_A Variable lymphocyte rec 99.3 1.4E-11 4.7E-16 110.4 10.6 90 5-94 47-137 (208)
271 3rgz_A Protein brassinosteroid 99.3 4.9E-12 1.7E-16 136.0 8.6 99 2-100 624-723 (768)
272 3m19_A Variable lymphocyte rec 99.3 1.6E-11 5.4E-16 113.5 10.1 92 3-94 76-168 (251)
273 3e6j_A Variable lymphocyte rec 99.2 1.9E-11 6.3E-16 111.4 9.9 91 2-94 34-125 (229)
274 2je0_A Acidic leucine-rich nuc 99.2 7.1E-12 2.4E-16 105.9 6.6 91 2-94 34-126 (149)
275 2v9t_B SLIT homolog 2 protein 99.2 1.7E-11 5.8E-16 110.9 9.3 93 3-95 73-166 (220)
276 3rfs_A Internalin B, repeat mo 99.2 2.9E-11 1E-15 113.1 10.9 90 5-94 104-194 (272)
277 2v70_A SLIT-2, SLIT homolog 2 99.2 1.8E-11 6.2E-16 110.7 9.1 94 3-96 74-168 (220)
278 2wfh_A SLIT homolog 2 protein 99.2 3.2E-11 1.1E-15 106.6 10.0 91 2-95 25-116 (193)
279 1p9a_G Platelet glycoprotein I 99.2 2.8E-11 9.5E-16 114.3 10.1 93 2-94 92-185 (290)
280 4g8a_A TOLL-like receptor 4; l 99.2 1.4E-11 4.7E-16 129.2 8.8 94 2-95 486-581 (635)
281 2ell_A Acidic leucine-rich nuc 99.2 1.1E-11 3.8E-16 107.0 6.7 91 2-94 41-133 (168)
282 1w8a_A SLIT protein; signaling 99.2 2.2E-11 7.6E-16 107.6 8.7 95 2-98 23-119 (192)
283 3m19_A Variable lymphocyte rec 99.2 7.5E-11 2.6E-15 108.9 10.5 93 3-95 52-145 (251)
284 2o6q_A Variable lymphocyte rec 99.2 7E-11 2.4E-15 110.4 10.1 90 5-94 104-194 (270)
285 1p9a_G Platelet glycoprotein I 99.2 7.9E-11 2.7E-15 111.2 10.0 87 7-94 74-161 (290)
286 2o6s_A Variable lymphocyte rec 99.2 1.2E-10 4.2E-15 104.2 10.6 85 10-94 28-113 (208)
287 3v47_A TOLL-like receptor 5B a 99.2 5E-11 1.7E-15 120.0 8.8 92 3-94 292-384 (455)
288 4fcg_A Uncharacterized protein 99.1 7.5E-11 2.6E-15 113.5 9.0 93 2-95 198-291 (328)
289 1dce_A Protein (RAB geranylger 99.1 5.8E-11 2E-15 122.6 8.6 91 2-96 456-548 (567)
290 1ogq_A PGIP-2, polygalacturona 99.1 2E-11 6.7E-16 116.8 4.6 97 2-98 68-166 (313)
291 3dxp_A Putative acyl-COA dehyd 99.1 1.6E-10 5.6E-15 112.6 10.9 142 177-322 42-248 (359)
292 2o6r_A Variable lymphocyte rec 99.1 2.3E-10 8E-15 99.5 10.3 94 4-97 46-140 (177)
293 4b8c_D Glucose-repressible alc 99.1 6.8E-11 2.3E-15 125.8 8.0 91 2-94 239-329 (727)
294 2z66_A Variable lymphocyte rec 99.1 1.2E-10 4E-15 110.9 8.8 93 3-95 143-237 (306)
295 3rfs_A Internalin B, repeat mo 99.1 2.4E-10 8.2E-15 106.9 10.5 90 5-94 80-170 (272)
296 1ozn_A Reticulon 4 receptor; N 99.1 6.7E-11 2.3E-15 111.4 6.3 92 3-94 122-214 (285)
297 2ell_A Acidic leucine-rich nuc 99.1 7.3E-11 2.5E-15 101.8 5.9 91 4-94 65-160 (168)
298 4ezg_A Putative uncharacterize 99.1 6.9E-11 2.4E-15 104.9 5.7 88 5-93 83-171 (197)
299 4fcg_A Uncharacterized protein 99.1 5.7E-11 1.9E-15 114.3 5.5 92 2-94 119-219 (328)
300 3zyj_A Leucine-rich repeat-con 99.1 1.3E-10 4.4E-15 116.6 8.3 90 6-95 203-293 (440)
301 4g8a_A TOLL-like receptor 4; l 99.1 1.3E-10 4.4E-15 121.8 8.2 92 3-94 69-161 (635)
302 2xot_A Amphoterin-induced prot 99.1 1.1E-10 3.9E-15 113.8 7.1 91 5-95 58-150 (361)
303 4ezg_A Putative uncharacterize 99.1 9.4E-11 3.2E-15 104.0 5.9 89 2-93 104-193 (197)
304 3vq2_A TLR4, TOLL-like recepto 99.1 1.2E-10 4.2E-15 121.6 7.3 94 3-96 466-560 (606)
305 3zyi_A Leucine-rich repeat-con 99.1 2.2E-10 7.4E-15 115.4 8.0 88 8-95 216-304 (452)
306 1a9n_A U2A', U2A'; complex (nu 99.0 1.8E-10 6E-15 100.3 6.0 83 7-93 16-100 (176)
307 3j0a_A TOLL-like receptor 5; m 99.0 1.1E-10 3.8E-15 126.7 5.8 90 3-96 473-562 (844)
308 2o6q_A Variable lymphocyte rec 99.0 6.9E-10 2.4E-14 103.6 10.4 91 5-95 80-171 (270)
309 1ozn_A Reticulon 4 receptor; N 99.0 5E-10 1.7E-14 105.3 9.4 92 3-94 73-166 (285)
310 2je0_A Acidic leucine-rich nuc 99.0 1.2E-10 4.2E-15 98.2 3.7 87 4-90 58-149 (149)
311 2xot_A Amphoterin-induced prot 99.0 3.8E-10 1.3E-14 110.0 7.7 92 2-95 33-126 (361)
312 2z63_A TOLL-like receptor 4, v 99.0 4.1E-10 1.4E-14 116.6 7.6 92 5-96 440-533 (570)
313 2z62_A TOLL-like receptor 4, v 99.0 6.4E-10 2.2E-14 104.1 8.0 85 10-94 28-113 (276)
314 3v47_A TOLL-like receptor 5B a 99.0 6E-10 2.1E-14 112.0 8.4 96 3-98 316-412 (455)
315 2z66_A Variable lymphocyte rec 99.0 4.3E-10 1.5E-14 106.9 6.9 90 5-94 121-212 (306)
316 1a9n_A U2A', U2A'; complex (nu 99.0 1.8E-10 6.3E-15 100.1 3.6 88 6-95 37-127 (176)
317 3g39_A Variable lymphocyte rec 99.0 1.1E-09 3.7E-14 94.7 8.3 74 3-76 47-120 (170)
318 3sg8_A APH(2'')-ID; antibiotic 99.0 2.4E-10 8.2E-15 108.7 4.2 187 178-376 25-288 (304)
319 2z62_A TOLL-like receptor 4, v 99.0 7.8E-10 2.7E-14 103.5 7.6 93 3-95 45-138 (276)
320 4eco_A Uncharacterized protein 99.0 1.7E-10 5.8E-15 121.2 3.0 93 2-94 198-318 (636)
321 3oja_B Anopheles plasmodium-re 98.9 1.5E-09 5.3E-14 113.1 9.8 89 6-94 71-160 (597)
322 2r9u_A Variable lymphocyte rec 98.9 1.5E-09 5.2E-14 94.1 8.1 75 3-77 50-124 (174)
323 2z80_A TOLL-like receptor 2, v 98.9 1E-09 3.5E-14 106.6 7.7 87 5-91 71-159 (353)
324 2id5_A Lingo-1, leucine rich r 98.9 6E-10 2.1E-14 112.9 6.3 91 5-95 243-334 (477)
325 2z81_A CD282 antigen, TOLL-lik 98.9 9.7E-10 3.3E-14 113.3 7.9 93 3-95 43-137 (549)
326 3o6n_A APL1; leucine-rich repe 98.9 2.2E-09 7.4E-14 105.8 9.8 90 6-95 65-155 (390)
327 1wwl_A Monocyte differentiatio 98.9 4.3E-10 1.5E-14 107.4 4.6 86 8-94 93-186 (312)
328 3vq2_A TLR4, TOLL-like recepto 98.9 1.5E-09 5.2E-14 113.3 8.9 90 5-94 51-141 (606)
329 1dce_A Protein (RAB geranylger 98.9 1.5E-09 5E-14 112.1 8.6 85 1-87 477-566 (567)
330 3zyi_A Leucine-rich repeat-con 98.9 2E-09 6.7E-14 108.3 9.0 85 10-94 75-160 (452)
331 4eco_A Uncharacterized protein 98.9 1.9E-09 6.3E-14 113.3 9.1 81 11-93 489-578 (636)
332 4b8c_D Glucose-repressible alc 98.9 8.8E-10 3E-14 117.2 6.7 90 3-94 217-306 (727)
333 1xku_A Decorin; proteoglycan, 98.9 2.1E-09 7.2E-14 103.3 8.8 85 10-94 192-276 (330)
334 3t6q_A CD180 antigen; protein- 98.9 1.5E-09 5.2E-14 113.3 8.1 93 3-95 50-143 (606)
335 2id5_A Lingo-1, leucine rich r 98.9 1.7E-09 5.9E-14 109.5 8.2 90 4-93 50-140 (477)
336 2z7x_B TOLL-like receptor 1, v 98.9 1.4E-09 4.9E-14 111.3 7.5 90 2-95 15-104 (520)
337 3zyj_A Leucine-rich repeat-con 98.9 2.8E-09 9.5E-14 106.8 9.4 84 10-93 64-148 (440)
338 1wwl_A Monocyte differentiatio 98.9 6.4E-10 2.2E-14 106.1 4.5 91 2-93 111-213 (312)
339 2ft3_A Biglycan; proteoglycan, 98.9 1.9E-09 6.7E-14 103.7 7.8 87 10-96 193-279 (332)
340 3o6n_A APL1; leucine-rich repe 98.9 1.7E-09 5.7E-14 106.6 7.5 92 3-94 86-178 (390)
341 3oja_B Anopheles plasmodium-re 98.9 1.6E-09 5.4E-14 113.0 7.4 93 3-95 92-185 (597)
342 1xku_A Decorin; proteoglycan, 98.9 2.6E-09 8.7E-14 102.7 8.1 92 3-95 209-307 (330)
343 4ecn_A Leucine-rich repeat pro 98.9 3.5E-10 1.2E-14 121.8 2.1 93 2-94 440-561 (876)
344 3a79_B TLR6, VLRB.59, TOLL-lik 98.9 2.5E-09 8.5E-14 110.7 8.4 90 2-95 46-135 (562)
345 2z80_A TOLL-like receptor 2, v 98.9 1.4E-09 4.7E-14 105.7 6.1 91 2-94 46-137 (353)
346 2xwt_C Thyrotropin receptor; s 98.9 1.4E-09 4.7E-14 99.5 5.7 86 5-91 50-140 (239)
347 3oja_A Leucine-rich immune mol 98.9 1.4E-09 4.7E-14 110.4 6.3 91 3-96 161-252 (487)
348 2z81_A CD282 antigen, TOLL-lik 98.9 1.3E-09 4.4E-14 112.4 6.1 92 2-95 20-112 (549)
349 4glp_A Monocyte differentiatio 98.9 2E-09 7E-14 102.5 7.0 86 6-94 193-285 (310)
350 3a79_B TLR6, VLRB.59, TOLL-lik 98.9 3.1E-09 1.1E-13 110.0 8.9 90 3-94 396-486 (562)
351 2z7x_B TOLL-like receptor 1, v 98.9 3E-09 1E-13 108.9 8.7 90 3-94 367-457 (520)
352 4ecn_A Leucine-rich repeat pro 98.9 5.8E-10 2E-14 120.1 3.4 96 2-98 481-589 (876)
353 3t6q_A CD180 antigen; protein- 98.9 3.3E-09 1.1E-13 110.7 8.4 94 2-95 73-167 (606)
354 2ft3_A Biglycan; proteoglycan, 98.9 4.5E-09 1.5E-13 101.1 8.7 92 3-95 210-308 (332)
355 3j0a_A TOLL-like receptor 5; m 98.9 2.7E-09 9.1E-14 115.9 7.7 91 3-93 66-160 (844)
356 3o53_A Protein LRIM1, AGAP0063 98.8 2.7E-09 9.2E-14 102.0 6.5 90 3-94 137-227 (317)
357 2z63_A TOLL-like receptor 4, v 98.8 4.2E-09 1.4E-13 109.0 8.0 91 4-94 46-137 (570)
358 1xeu_A Internalin C; cellular 98.8 6.4E-09 2.2E-13 96.6 8.0 82 6-93 37-118 (263)
359 1h6t_A Internalin B; cell adhe 98.8 7.4E-09 2.5E-13 97.7 8.4 84 6-94 86-169 (291)
360 1h6t_A Internalin B; cell adhe 98.8 5.1E-09 1.7E-13 98.8 7.0 85 5-94 107-191 (291)
361 1ziw_A TOLL-like receptor 3; i 98.8 7.5E-09 2.6E-13 109.6 8.8 90 5-94 44-134 (680)
362 4glp_A Monocyte differentiatio 98.8 5.4E-09 1.8E-13 99.6 6.8 85 9-93 90-181 (310)
363 2xwt_C Thyrotropin receptor; s 98.8 3.1E-09 1.1E-13 97.1 5.0 89 4-94 74-169 (239)
364 4fmz_A Internalin; leucine ric 98.8 5.3E-09 1.8E-13 101.1 6.7 86 6-95 239-325 (347)
365 1ziw_A TOLL-like receptor 3; i 98.8 7.8E-09 2.7E-13 109.4 8.5 92 3-94 66-158 (680)
366 1ds9_A Outer arm dynein; leuci 98.8 5.7E-11 1.9E-15 105.5 -7.7 89 2-94 40-128 (198)
367 1h6u_A Internalin H; cell adhe 98.8 1.4E-08 4.9E-13 96.5 8.4 84 5-93 58-141 (308)
368 1xeu_A Internalin C; cellular 98.8 1.4E-08 4.9E-13 94.2 8.1 84 6-95 81-164 (263)
369 1m9s_A Internalin B; cell inva 98.7 1.3E-08 4.4E-13 105.7 8.2 84 5-93 104-187 (605)
370 1h6u_A Internalin H; cell adhe 98.7 1.8E-08 6.2E-13 95.8 8.3 84 6-94 81-164 (308)
371 1m9s_A Internalin B; cell inva 98.7 1.7E-08 5.9E-13 104.8 8.8 84 6-94 83-166 (605)
372 3r70_A Aminoglycoside phosphot 98.7 4.5E-08 1.5E-12 93.6 10.8 136 174-322 38-237 (320)
373 3o53_A Protein LRIM1, AGAP0063 98.7 5E-09 1.7E-13 100.1 3.9 84 9-93 119-203 (317)
374 2ifg_A High affinity nerve gro 98.7 1.7E-08 5.7E-13 97.7 7.2 81 13-95 11-94 (347)
375 1ds9_A Outer arm dynein; leuci 98.7 1.4E-10 4.8E-15 102.9 -7.1 93 2-98 63-157 (198)
376 3d1u_A Putative fructosamine-3 98.6 3.3E-07 1.1E-11 86.0 12.5 76 177-256 19-97 (288)
377 4fmz_A Internalin; leucine ric 98.6 1.1E-07 3.7E-12 91.9 8.8 83 6-93 62-144 (347)
378 4ay9_X Follicle-stimulating ho 98.6 3.8E-08 1.3E-12 95.4 5.4 92 2-95 24-118 (350)
379 1o6v_A Internalin A; bacterial 98.6 6.2E-08 2.1E-12 97.7 7.2 84 6-94 283-366 (466)
380 3bz5_A Internalin-J, INLJ; leu 98.6 1.2E-07 4.1E-12 95.3 9.1 80 6-93 60-139 (457)
381 1o6v_A Internalin A; bacterial 98.6 5.9E-08 2E-12 97.9 6.9 85 5-94 63-147 (466)
382 4gkh_A Aminoglycoside 3'-phosp 98.6 3.3E-07 1.1E-11 85.2 11.4 135 179-321 30-222 (272)
383 3cvr_A Invasion plasmid antige 98.6 4E-08 1.4E-12 101.0 5.2 76 8-94 138-220 (571)
384 3tdw_A Gentamicin resistance p 98.5 4.1E-07 1.4E-11 86.3 11.7 136 178-322 24-224 (306)
385 3bz5_A Internalin-J, INLJ; leu 98.5 9.8E-08 3.4E-12 95.9 6.9 86 3-95 35-120 (457)
386 3cvr_A Invasion plasmid antige 98.5 2.1E-07 7.2E-12 95.7 8.8 73 10-93 80-152 (571)
387 3ats_A Putative uncharacterize 98.5 3.5E-07 1.2E-11 88.7 9.6 80 179-258 26-122 (357)
388 3rw6_A Nuclear RNA export fact 98.5 6.1E-08 2.1E-12 89.3 3.6 66 8-75 168-237 (267)
389 2ca6_A RAN GTPase-activating p 98.5 8.7E-09 3E-13 101.3 -2.8 88 6-93 183-286 (386)
390 3ovc_A Hygromycin-B 4-O-kinase 98.4 9E-07 3.1E-11 86.0 10.6 75 177-257 45-122 (362)
391 2ast_B S-phase kinase-associat 98.4 2.5E-08 8.6E-13 95.9 -0.9 81 10-91 70-152 (336)
392 3goz_A Leucine-rich repeat-con 98.4 4.6E-08 1.6E-12 95.2 0.5 92 3-94 15-122 (362)
393 3g06_A SSPH2 (leucine-rich rep 98.4 5.3E-07 1.8E-11 93.8 7.8 54 34-94 221-274 (622)
394 3g06_A SSPH2 (leucine-rich rep 98.3 7.1E-07 2.4E-11 92.8 8.3 79 2-93 55-133 (622)
395 1jl5_A Outer protein YOPM; leu 98.3 1.1E-06 3.6E-11 88.2 9.3 77 10-93 131-207 (454)
396 1jl5_A Outer protein YOPM; leu 98.3 1.2E-06 4.2E-11 87.8 9.0 77 10-95 111-187 (454)
397 2ast_B S-phase kinase-associat 98.3 3.2E-08 1.1E-12 95.1 -3.1 91 3-93 86-181 (336)
398 2ca6_A RAN GTPase-activating p 98.2 1.1E-07 3.7E-12 93.4 -0.6 92 2-93 24-134 (386)
399 3rw6_A Nuclear RNA export fact 98.2 6.6E-08 2.3E-12 89.1 -2.2 85 8-94 139-233 (267)
400 4ay9_X Follicle-stimulating ho 98.2 1.1E-06 3.8E-11 85.0 6.2 91 2-92 45-139 (350)
401 2olc_A MTR kinase, methylthior 98.2 8.2E-06 2.8E-10 80.3 11.5 75 178-254 35-120 (397)
402 3goz_A Leucine-rich repeat-con 98.2 1.7E-07 5.8E-12 91.2 -1.2 91 4-94 44-151 (362)
403 2q83_A YTAA protein; 2635576, 98.1 1.6E-05 5.6E-10 76.2 11.0 138 179-321 38-251 (346)
404 3f7w_A Putative fructosamine-3 98.0 3.1E-05 1.1E-09 72.4 11.7 79 174-256 16-97 (288)
405 3jr1_A Putative fructosamine-3 97.9 0.00013 4.6E-09 68.8 12.6 136 178-318 41-232 (312)
406 1z7x_W Ribonuclease inhibitor; 97.8 1.1E-06 3.8E-11 88.2 -2.4 92 3-94 277-383 (461)
407 1z7x_W Ribonuclease inhibitor; 97.8 1.4E-06 4.8E-11 87.4 -2.5 87 7-93 25-125 (461)
408 3sb4_A Hypothetical leucine ri 97.8 2.5E-05 8.7E-10 74.6 5.8 85 9-95 225-311 (329)
409 3un9_A NLR family member X1; l 97.7 2.2E-06 7.5E-11 83.5 -2.1 62 10-71 155-224 (372)
410 2pyw_A Uncharacterized protein 97.7 0.00012 4.2E-09 72.4 10.2 78 291-372 231-313 (420)
411 3sb4_A Hypothetical leucine ri 97.7 4.1E-05 1.4E-09 73.1 5.9 83 4-88 244-328 (329)
412 1io0_A Tropomodulin; LRR prote 97.7 6.1E-06 2.1E-10 71.9 0.1 88 6-93 32-135 (185)
413 2ppq_A HSK, HK, homoserine kin 97.7 0.00014 4.8E-09 69.0 9.4 157 162-321 6-216 (322)
414 3dxq_A Choline/ethanolamine ki 97.6 0.00021 7.2E-09 67.2 10.4 71 178-256 23-95 (301)
415 3un9_A NLR family member X1; l 97.6 3.8E-06 1.3E-10 81.8 -2.2 84 10-93 101-195 (372)
416 1io0_A Tropomodulin; LRR prote 97.6 4.6E-06 1.6E-10 72.7 -1.5 89 5-93 60-163 (185)
417 3csv_A Aminoglycoside phosphot 97.5 0.00067 2.3E-08 64.7 12.1 139 179-322 24-217 (333)
418 2qg7_A Ethanolamine kinase PV0 97.5 0.00045 1.5E-08 68.8 10.8 74 178-256 113-188 (458)
419 2yle_A Protein spire homolog 1 97.5 0.00072 2.5E-08 59.2 10.6 102 255-374 34-135 (229)
420 1nw1_A Choline kinase (49.2 KD 97.5 0.00028 9.7E-09 69.9 9.1 73 178-256 78-159 (429)
421 3feg_A Choline/ethanolamine ki 97.5 0.00029 1E-08 68.3 8.9 139 178-321 55-253 (379)
422 1zyl_A Hypothetical protein YI 97.4 0.0011 3.8E-08 62.9 11.4 156 162-321 10-222 (328)
423 3e4g_A ATP synthase subunit S, 97.4 2.5E-05 8.6E-10 66.7 -0.1 92 2-93 53-151 (176)
424 3c5i_A Choline kinase; choline 97.3 0.00059 2E-08 66.1 8.2 73 179-256 39-121 (369)
425 3rfe_A Platelet glycoprotein I 97.3 0.00051 1.7E-08 55.7 6.5 57 13-71 11-68 (130)
426 3ogk_B Coronatine-insensitive 97.2 2.3E-05 8E-10 81.1 -2.5 83 8-90 162-252 (592)
427 2p1m_B Transport inhibitor res 97.1 2.7E-05 9.1E-10 80.7 -3.3 60 33-92 455-517 (594)
428 3i1a_A Spectinomycin phosphotr 97.0 0.0026 8.9E-08 60.8 10.2 67 183-256 33-108 (339)
429 3rfe_A Platelet glycoprotein I 96.9 0.001 3.5E-08 53.9 5.4 57 37-95 11-69 (130)
430 3f2s_A CK, chetk-alpha, cholin 96.9 0.0041 1.4E-07 60.5 9.9 140 178-321 57-279 (401)
431 2p1m_B Transport inhibitor res 96.8 0.00019 6.3E-09 74.3 -0.2 85 8-92 103-195 (594)
432 2ra8_A Uncharacterized protein 96.8 0.0002 6.8E-09 69.2 -0.1 15 9-23 192-206 (362)
433 4fdw_A Leucine rich hypothetic 96.7 0.002 6.9E-08 63.1 6.4 87 4-93 265-357 (401)
434 3ogk_B Coronatine-insensitive 96.6 0.00052 1.8E-08 70.8 1.1 61 6-67 188-252 (592)
435 3mes_A Choline kinase; malaria 96.5 0.007 2.4E-07 59.5 8.7 74 178-256 75-157 (424)
436 2ra8_A Uncharacterized protein 96.4 0.00026 8.9E-09 68.3 -1.9 86 8-93 217-319 (362)
437 4fdw_A Leucine rich hypothetic 96.4 0.0053 1.8E-07 60.1 6.9 78 11-91 158-236 (401)
438 4gt6_A Cell surface protein; l 95.5 0.013 4.4E-07 57.1 5.5 86 5-93 283-369 (394)
439 3g15_A CK, chetk-alpha, cholin 95.4 0.018 6.2E-07 56.3 6.0 29 293-321 245-279 (401)
440 3e4g_A ATP synthase subunit S, 95.3 0.002 6.8E-08 54.9 -0.9 67 5-71 80-153 (176)
441 1pgv_A TMD-1, tropomodulin TMD 95.2 0.0041 1.4E-07 54.0 0.6 84 8-91 39-136 (197)
442 4fs7_A Uncharacterized protein 95.1 0.023 7.8E-07 55.3 5.6 83 5-90 292-375 (394)
443 4gt6_A Cell surface protein; l 94.8 0.038 1.3E-06 53.7 6.4 84 5-91 260-344 (394)
444 4h09_A Hypothetical leucine ri 94.6 0.056 1.9E-06 52.1 7.1 39 29-67 281-319 (379)
445 4fs7_A Uncharacterized protein 93.6 0.051 1.7E-06 52.8 4.4 63 4-68 314-376 (394)
446 4h09_A Hypothetical leucine ri 93.3 0.077 2.6E-06 51.1 5.1 65 5-71 281-345 (379)
447 1pgv_A TMD-1, tropomodulin TMD 91.7 0.057 2E-06 46.7 1.6 63 7-69 67-137 (197)
448 2ks1_B Epidermal growth factor 90.7 0.54 1.8E-05 29.4 4.8 7 122-128 17-23 (44)
449 2jwa_A Receptor tyrosine-prote 89.5 0.51 1.7E-05 29.4 3.9 12 134-145 30-41 (44)
450 4ann_A ESSB; membrane protein, 88.9 1.3 4.5E-05 38.6 7.8 122 227-382 43-164 (215)
451 2l2t_A Receptor tyrosine-prote 85.1 2 7E-05 26.7 4.9 6 137-142 32-37 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 83.4 0.12 4E-06 51.5 -2.1 61 176-239 145-214 (463)
453 4ano_A ESSB; membrane protein, 82.5 6.1 0.00021 34.4 8.8 115 227-377 48-164 (219)
454 2k1k_A Ephrin type-A receptor 63.8 12 0.00039 22.5 4.0 10 118-127 12-21 (38)
455 3ls8_A Phosphatidylinositol 3- 61.4 58 0.002 33.1 11.1 46 269-321 454-501 (614)
456 2lz0_A Uncharacterized protein 59.0 13 0.00045 27.7 4.7 47 21-68 7-53 (100)
457 1cja_A Protein (actin-fragmin 49.0 36 0.0012 31.6 6.7 135 179-322 75-237 (342)
458 2lz0_A Uncharacterized protein 45.5 35 0.0012 25.3 5.1 41 4-45 14-54 (100)
459 4b19_A PEPA1; toxin, toxin apo 37.3 27 0.00092 19.5 2.3 25 120-144 5-29 (30)
460 2x6h_A GH13170P, VPS34, phosph 27.5 32 0.0011 35.5 3.0 44 271-321 530-575 (696)
461 2klu_A T-cell surface glycopro 25.7 1.6E+02 0.0054 19.9 5.3 7 122-128 12-18 (70)
462 3a1g_A RNA-directed RNA polyme 21.6 2E+02 0.0069 19.8 5.0 46 416-461 8-57 (80)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.6e-58 Score=436.58 Aligned_cols=259 Identities=28% Similarity=0.465 Sum_probs=217.6
Q ss_pred CCCCCCCeecccCceEEEEEEeC------CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
++|.+.+.||+|+||+||+|++. ++..||||+++.......+.|.+|+++|++++|||||+++++|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46788899999999999999863 478899999987666677889999999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEE
Q 040392 247 VLEYMPHGSLEKYMYSSN------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHL 314 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl 314 (470)
|||||++|+|.+++...+ ..+++.++..++.|+++||+||| +++|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997542 46899999999999999999999 899999999999999999999999
Q ss_pred eeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhc
Q 040392 315 SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWL 393 (470)
Q Consensus 315 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 393 (470)
+|||+|+...............||+.|+|||++.+..++.++|||||||++|||+| |+.||......+ +...+....
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i~~~~ 247 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECITQGR 247 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHHTC
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHcCC
Confidence 99999987654443334445679999999999999999999999999999999999 899998754322 111111110
Q ss_pred CCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 394 PISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
....+..|+.++.+|+.+||+.||++|||+.||.+.|+++...
T Consensus 248 ------------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 ------------------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp ------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------------------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 0112345678899999999999999999999999999998643
No 2
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-57 Score=429.86 Aligned_cols=263 Identities=27% Similarity=0.435 Sum_probs=209.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.+++.+.+.||+|+||+||+|++.+ .||||+++.. ..+..+.|.+|++++++++|||||++++++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4577888999999999999998753 5999998643 33456789999999999999999999999865 45789999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
||++|+|.+++...+..+++.++..++.|+++||+||| +++|+||||||+|||+++++.+||+|||+|+........
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999877778999999999999999999999 899999999999999999999999999999876543333
Q ss_pred ccccccccCccccCccccCC---CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 330 MTQTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
......+||+.|||||++.+ +.++.++|||||||++|||+||+.||.+..... .+...+...... +..
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~~~-------p~~- 259 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYAS-------PDL- 259 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTCCC-------CCS-
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCCC-------CCc-
Confidence 34455689999999999853 458999999999999999999999998643322 111111111110 000
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
...+..|+.++.+|+.+||+.||++||||.||+++|+.++.++
T Consensus 260 ------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 260 ------SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ------TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ------ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 0112356788999999999999999999999999999886543
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.7e-57 Score=437.11 Aligned_cols=258 Identities=27% Similarity=0.461 Sum_probs=209.7
Q ss_pred CCCCCCCeecccCceEEEEEEeC------CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
++|.+.+.||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++++|.+....++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999864 478899999987666677889999999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCe
Q 040392 247 VLEYMPHGSLEKYMYSSN--------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA 312 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~ 312 (470)
|||||++|+|.+++.... ..+++.+++.++.|+++||+||| +++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997542 35899999999999999999999 8999999999999999999999
Q ss_pred EEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhh
Q 040392 313 HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVND 391 (470)
Q Consensus 313 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 391 (470)
||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||+| |+.||......+ ....+..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i~~ 275 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--AIDCITQ 275 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--HHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--HHHHHHc
Confidence 9999999987755444444456679999999999999999999999999999999999 899998643321 1111111
Q ss_pred hcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 392 WLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
.. +...+..|+.++.+|+.+||+.||++||||.||+++|+.+..
T Consensus 276 g~------------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 276 GR------------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp TC------------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CC------------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 10 011234567889999999999999999999999999999864
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.7e-57 Score=432.15 Aligned_cols=256 Identities=24% Similarity=0.428 Sum_probs=213.5
Q ss_pred CCCCCCeecccCceEEEEEEeC------CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 174 GFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 174 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
++++.+.||+|+||+||+|++. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4566789999999999999863 46889999997543 3345679999999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC
Q 040392 247 VLEYMPHGSLEKYMYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV 311 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~ 311 (470)
|||||++|+|.+++.... ..+++..+.+++.|||+||+||| +++|+||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 999999999999996532 35899999999999999999999 899999999999999999999
Q ss_pred eEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhh
Q 040392 312 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVN 390 (470)
Q Consensus 312 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 390 (470)
+||+|||+|+.....+.........||+.|+|||++.++.++.++|||||||++|||+| |+.||.+.... .+...+.
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~i~ 261 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEMIR 261 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH
Confidence 99999999987654444444455679999999999999999999999999999999999 89999875332 2222221
Q ss_pred hhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392 391 DWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR 452 (470)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~ 452 (470)
... ..+.+..|+.++.+|+.+||+.||++||||.||+++|+.+.
T Consensus 262 ~~~------------------~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 262 NRQ------------------VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp TTC------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred cCC------------------CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 110 01123467888999999999999999999999999998753
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7e-55 Score=419.90 Aligned_cols=250 Identities=24% Similarity=0.292 Sum_probs=211.5
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
+.|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++|+.++|||||++++++.+.+..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45888999999999999999864 69999999998766666777899999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCccc
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 331 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 331 (470)
++|+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.... ..
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CC
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Cc
Confidence 999999999764 4899999999999999999999 9999999999999999999999999999998764322 22
Q ss_pred ccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhh
Q 040392 332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDI 411 (470)
Q Consensus 332 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
....+||+.|+|||++.+..|+.++|||||||++|||++|+.||...... .....+....+...
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~~~-------------- 290 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPRL-------------- 290 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSSCCCC--------------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCCCC--------------
Confidence 34578999999999999999999999999999999999999999763221 11111111111110
Q ss_pred hhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 412 HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 412 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.....++.++.+|+.+||..||++|||+.|+++|
T Consensus 291 --~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 --KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp --SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1123346778999999999999999999999875
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.4e-54 Score=416.51 Aligned_cols=255 Identities=24% Similarity=0.294 Sum_probs=209.2
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
+.|++.+.||+|+||.||+|++. +|+.||||+++.+.. ..+|+.+++.++|||||++++++.+++..|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45777889999999999999864 699999999975422 246999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC-CeEEeeeccccccCCCCCc-
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM-VAHLSDFSIAKLLTGEDQS- 329 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~~~- 329 (470)
+||+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++ ++||+|||+|+.+......
T Consensus 133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999997654 6899999999999999999999 99999999999999999988 6999999999877543221
Q ss_pred --ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 330 --MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 330 --~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
......+||+.|||||++.+..++.++|||||||++|||+||+.||......+... .......+ .
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~i~~~~~~--~---------- 275 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL-KIASEPPP--I---------- 275 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH-HHHHSCCG--G----------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH-HHHcCCCC--c----------
Confidence 12234579999999999999999999999999999999999999998754433221 11110000 0
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
...+..++.++.+++.+||+.||++|||+.|++++|.+....
T Consensus 276 -----~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 276 -----REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp -----GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 011234577899999999999999999999999999887654
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.3e-55 Score=422.04 Aligned_cols=251 Identities=20% Similarity=0.321 Sum_probs=204.1
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|++++.||+|+||+||+|+. .+|+.||||++... .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 46899999999999999999976 46999999999754 2345667889999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 249 EYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+||+|.+++...+ ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~-- 177 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-- 177 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH--
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecC--
Confidence 9999999999997654 45789999999999999999999 99999999999999999999999999999986532
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
........+||+.|+|||++.+..|+.++|||||||++|||+||+.||......+ .+........+
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~------------- 243 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-LVLKIISGSFP------------- 243 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCC-------------
T ss_pred CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCC-------------
Confidence 1122345679999999999999999999999999999999999999997632221 11111111110
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus 244 ------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 ------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0112346778999999999999999999999875
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.2e-55 Score=423.57 Aligned_cols=267 Identities=23% Similarity=0.371 Sum_probs=219.7
Q ss_pred HHHHHhhCCCCCCCeecccCceEEEEEEeCC------CcEEEEEEeeccc-chhhhhHHHHHHHHhcCCC-CcceeEEee
Q 040392 166 LELCRATDGFSENNLIGRGGFGSVYKARLGD------GMEVAVKVFNLQC-GRALKGFDVECEMMKSIRH-RNLIKVIST 237 (470)
Q Consensus 166 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~nIv~~~~~ 237 (470)
...+...++|++.+.||+|+||+||+|++.. ++.||||.+.... ....+.+.+|+++|++++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 3344556789999999999999999997532 4689999997553 3345678999999999976 899999999
Q ss_pred eccC-CeeeEEEecCCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 040392 238 CSNE-EFKALVLEYMPHGSLEKYMYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKP 301 (470)
Q Consensus 238 ~~~~-~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp 301 (470)
|.+. ...++|||||++|+|.++++... ..+++..+..++.|||+||+||| +++|+||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCc
Confidence 8664 56899999999999999997532 35899999999999999999999 99999999999
Q ss_pred CCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCcccc
Q 040392 302 SNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFN 380 (470)
Q Consensus 302 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~ 380 (470)
+|||+++++.+||+|||+|+.+.............||+.|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999997765544445556789999999999999999999999999999999998 9999987543
Q ss_pred CcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 381 GEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
.+. +...+.... +...+..++.++.+++.+||+.||++|||+.||+++|+++..+
T Consensus 294 ~~~-~~~~i~~g~------------------~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 294 DEE-FCRRLKEGT------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp SHH-HHHHHHHTC------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHcCC------------------CCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 322 222221111 1112344577899999999999999999999999999998754
No 9
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.5e-55 Score=415.85 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=211.5
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc---cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||+||+|+. .+|+.||||++.+. .....+.+.+|+++++.++|||||++++++.+.+..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999975 46999999999754 233456788999999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||++||+|.+++.+.+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 111 mEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 99999999999997654 6899999999999999999999 9999999999999999999999999999999876544
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
........+||+.|+|||++.+..|+.++||||+||++|||++|+.||......+ .+........
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~~i~~~~~-------------- 251 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL-IFAKIIKLEY-------------- 251 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCC--------------
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCC--------------
Confidence 4444556789999999999999999999999999999999999999997632211 1111111100
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+|+.+||..||++|||+.|++.+
T Consensus 252 ------~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 252 ------DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp ------CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred ------CCCcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 0112346678999999999999999999997543
No 10
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-54 Score=413.29 Aligned_cols=276 Identities=22% Similarity=0.299 Sum_probs=201.8
Q ss_pred CCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC----eeeEEE
Q 040392 173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE----FKALVL 248 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~----~~~lv~ 248 (470)
.+|.+.+.||+|+||+||+|++ +|+.||||+++..... ...+..|+..+..++|||||++++++.+++ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3567778999999999999998 5899999999754322 122334666667889999999999997653 578999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG-----YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
||+++|+|.++++.. .+++..+.+++.|+++||+|||+. ...+|+||||||+|||++.++++||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999999765 489999999999999999999932 1239999999999999999999999999999876
Q ss_pred CCCCCc--ccccccccCccccCccccCCC------CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC
Q 040392 324 TGEDQS--MTQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI 395 (470)
Q Consensus 324 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~------~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (470)
...... ......+||+.|+|||++.+. .++.++|||||||++|||+||+.||......+.....+.......
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 222345799999999998754 467899999999999999999888765433332221111000000
Q ss_pred c-ccc-cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 396 S-TME-VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 396 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
. ... +....+ ............++..+.+|+.+||+.||++||||.||++.|+++.+
T Consensus 239 ~~~~~~~~~~~~-rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 239 EEMRKVVCEQKL-RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp HHHHHHHTTSCC-CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccC-CCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 0 000 000010 00001111223456789999999999999999999999999999864
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.8e-54 Score=404.26 Aligned_cols=245 Identities=24% Similarity=0.374 Sum_probs=197.6
Q ss_pred CCCCeecccCceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeecc----CCeeeEEE
Q 040392 176 SENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSN----EEFKALVL 248 (470)
Q Consensus 176 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~lv~ 248 (470)
.+.+.||+|+||+||+|.+. ++..||+|++... .....+.+.+|++++++++|||||++++++.+ ....++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999764 6899999998654 23345678999999999999999999999864 35679999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeC-CCCCeEEeeeccccccCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP--IIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dlkp~Nill~-~~~~~kl~Dfg~a~~~~~ 325 (470)
|||++|+|.+++.+.. .+++..+..++.||+.||+||| +++ |+||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999997654 6899999999999999999999 777 99999999999997 489999999999985432
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
......+||+.|+|||++.+ .++.++|||||||++|||+||+.||.+..+... +...+......
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-~~~~i~~~~~~---------- 248 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYRRVTSGVKP---------- 248 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHHHHTTTCCC----------
T ss_pred ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-HHHHHHcCCCC----------
Confidence 12335689999999998865 699999999999999999999999975432211 11111110000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus 249 -------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 249 -------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01122335678999999999999999999999875
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.3e-53 Score=421.13 Aligned_cols=250 Identities=24% Similarity=0.292 Sum_probs=211.7
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
+.|++.+.||+|+||.||+|+.. +|+.||||++........+.+.+|+++|+.++|||||++++++.+.+..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999864 69999999998766666778899999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCccc
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 331 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 331 (470)
+||+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.... ..
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CC
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cc
Confidence 999999999754 4899999999999999999999 9999999999999999999999999999998764332 22
Q ss_pred ccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhh
Q 040392 332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDI 411 (470)
Q Consensus 332 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||...... .....+....+...
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~~~-------------- 367 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPRL-------------- 367 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCCCC--------------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCCCC--------------
Confidence 34568999999999999999999999999999999999999999763221 11111211111110
Q ss_pred hhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 412 HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 412 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.....++.++.+|+.+||..||++|||+.|+++|
T Consensus 368 --~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 --KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp --SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0112346778999999999999999999999885
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-53 Score=399.58 Aligned_cols=246 Identities=23% Similarity=0.350 Sum_probs=192.4
Q ss_pred CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
++|++.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 6899999999999999999985 469999999997542 234567889999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
||+ +|+|.+++.+.+ .+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence 999 679999997654 6899999999999999999999 999999999999999999999999999999865432
Q ss_pred cccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
......+||+.|+|||++.+..+ +.++||||+||++|||+||+.||...... .+...+.....
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--~~~~~i~~~~~------------- 229 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNGVY------------- 229 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC-------------
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCC-------------
Confidence 22334689999999999988776 57999999999999999999999763221 11111111000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus 230 ------~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 230 ------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0112346678999999999999999999999885
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.4e-54 Score=406.35 Aligned_cols=248 Identities=25% Similarity=0.315 Sum_probs=198.7
Q ss_pred CCCCCCCeecccCceEEEEEEeC----CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
++|++.+.||+|+||+||+|+.. +++.||||+++... ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999752 47899999987542 2334567889999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||++||+|.+++.+.+ .+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997654 6899999999999999999999 999999999999999999999999999999865332
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
. ......+||+.|+|||++.+..++.++||||+||++|||+||+.||......+ .+........
T Consensus 180 ~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~------------- 243 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE-TMTMILKAKL------------- 243 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC-------------
T ss_pred C--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHH-HHHHHHcCCC-------------
Confidence 2 22345689999999999999999999999999999999999999997632221 1111111100
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCH-----HHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINA-----REIVAK 447 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~el~~~ 447 (470)
..+..++.++.+|+.+||+.||++|||+ +|+++|
T Consensus 244 -------~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 244 -------GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred -------CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 0122346778999999999999999985 677654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.8e-52 Score=394.68 Aligned_cols=250 Identities=23% Similarity=0.385 Sum_probs=188.7
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccc-hhhhhHHHHHHHHhcCCCCcceeEEeeeccCC--------
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIKVISTCSNEE-------- 242 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-------- 242 (470)
++|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45889999999999999999864 699999999875433 34567889999999999999999999986443
Q ss_pred ----eeeEEEecCCCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEee
Q 040392 243 ----FKALVLEYMPHGSLEKYMYSSN--YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSD 316 (470)
Q Consensus 243 ----~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~D 316 (470)
+.|+||||+++|+|.+++.... ...++..+..++.|+++||+||| +++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 4689999999999999997654 23456778899999999999999 99999999999999999999999999
Q ss_pred eccccccCCCCCc----------ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhh
Q 040392 317 FSIAKLLTGEDQS----------MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK 386 (470)
Q Consensus 317 fg~a~~~~~~~~~----------~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~ 386 (470)
||+|+.+...... ......+||+.|+|||++.+..|+.++|||||||++|||++ ||....+. ..
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~---~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER---VR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH---HH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH---HH
Confidence 9999876433221 12234579999999999999999999999999999999996 77542111 11
Q ss_pred HHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 387 HWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ......... .......+.++.+|+.+||+.||++|||+.|+++|
T Consensus 236 ~-~~~~~~~~~---------------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 236 T-LTDVRNLKF---------------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp H-HHHHHTTCC---------------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred H-HHHHhcCCC---------------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 111000000 00112224456789999999999999999999874
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.2e-49 Score=387.84 Aligned_cols=270 Identities=24% Similarity=0.264 Sum_probs=202.9
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeecc------CC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSN------EE 242 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------~~ 242 (470)
.++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|+.++|||||++++++.. ..
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 36799999999999999999976 469999999996442 2345667889999999999999999998753 36
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..|+|||||+ |+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999996 68999997654 6899999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCC--CcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc--c
Q 040392 323 LTGED--QSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS--T 397 (470)
Q Consensus 323 ~~~~~--~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~ 397 (470)
+.... ........+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+....+ .+........... .
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCChHH
Confidence 64322 12233457899999999998775 46999999999999999999999997632211 1111111110000 0
Q ss_pred cccccc--------cccCchh-hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 398 MEVVGA--------NLLSQED-IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 398 ~~~~~~--------~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...... ....... .........+.++.+|+.+||..||++|||+.|+++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 000000 0000000 0000112346778999999999999999999999885
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.2e-48 Score=382.29 Aligned_cols=269 Identities=20% Similarity=0.275 Sum_probs=200.9
Q ss_pred HhhCCCCCCCeecccCceEEEEEEeC----CCcEEEEEEeecccchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCee
Q 040392 170 RATDGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQCGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 170 ~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~ 244 (470)
...++|++.+.||+|+||+||+|+.+ +++.||+|.+.... ....+.+|+++++.+ .||||+++++++.+.++.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 35678999999999999999999742 47889999986442 334577899999998 699999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-CCeEEeeecccccc
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDN-MVAHLSDFSIAKLL 323 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~-~~~kl~Dfg~a~~~ 323 (470)
++||||+++|+|.+++. .+++.++..++.|++.||+||| +++|+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999984 4889999999999999999999 9999999999999999876 79999999999865
Q ss_pred CCCCCc--------------------------ccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCC
Q 040392 324 TGEDQS--------------------------MTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTN 376 (470)
Q Consensus 324 ~~~~~~--------------------------~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~ 376 (470)
...... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 432111 112345799999999998775 58999999999999999999999996
Q ss_pred ccccCcchhhHHhhhh-----------c----------CCc-ccc---------cccccccC---chhhhhHhhhhhHHH
Q 040392 377 EIFNGEMTLKHWVNDW-----------L----------PIS-TME---------VVGANLLS---QEDIHFVAKEQCVSC 422 (470)
Q Consensus 377 ~~~~~~~~~~~~~~~~-----------~----------~~~-~~~---------~~~~~~~~---~~~~~~~~~~~~~~~ 422 (470)
...+....+....... . +.. ... ...+.... ............+.+
T Consensus 249 ~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~ 328 (361)
T 4f9c_A 249 KASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDE 328 (361)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHH
T ss_pred CCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHH
Confidence 5433222211111000 0 000 000 00000000 000001111234677
Q ss_pred HHHHHhhccCCCccCCCCHHHHHHH
Q 040392 423 VFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 423 l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
+.+|+.+||+.||++|||++|+++|
T Consensus 329 a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 329 AYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHCcCChhHCcCHHHHhcC
Confidence 8999999999999999999999875
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=3.2e-48 Score=401.41 Aligned_cols=253 Identities=19% Similarity=0.262 Sum_probs=212.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|++.+.||+|+||.||+|... +|+.||+|++........+.+.+|+++|+.++||||+++++++.+....++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999764 6999999999766555667788999999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC--CCeEEeeeccccccCCCCC
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDN--MVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~--~~~kl~Dfg~a~~~~~~~~ 328 (470)
|+||+|.+++......+++..+..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 9999999999776677999999999999999999999 9999999999999999854 89999999999977432
Q ss_pred cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+....+. +..........
T Consensus 311 -~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~i~~~~~~~------------- 375 (573)
T 3uto_A 311 -QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNVKSCDWNM------------- 375 (573)
T ss_dssp -SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHHHHTTCCCC-------------
T ss_pred -CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHhCCCCC-------------
Confidence 223446799999999999999999999999999999999999999976432211 11111100000
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.......++.++.+|+.+||..||.+|||+.|+++|
T Consensus 376 ---~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 376 ---DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ---CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ---CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 001112346778999999999999999999999985
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.9e-47 Score=366.67 Aligned_cols=278 Identities=33% Similarity=0.537 Sum_probs=229.2
Q ss_pred HHHHhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 167 ELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 167 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
++...+++|+..+.||+|+||.||+|++.+++.||||++........+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 34456789999999999999999999988899999999877666667788999999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 247 VLEYMPHGSLEKYMYSSN---YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 999999999999997654 35899999999999999999999 899999999999999999999999999999865
Q ss_pred CCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCc-chhhHHhhhhc-CCcccccc
Q 040392 324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE-MTLKHWVNDWL-PISTMEVV 401 (470)
Q Consensus 324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~~ 401 (470)
.............||+.|+|||.+.+..++.++||||||+++|||++|+.||......+ .....|..... ........
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (321)
T 2qkw_B 190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269 (321)
T ss_dssp SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSS
T ss_pred ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhc
Confidence 43333333344568999999999988899999999999999999999999998654432 22333432222 11222333
Q ss_pred cccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
++..... .+..++..+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 270 ~~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 270 DPNLADK------IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp SSSCTTC------SCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred Chhhccc------cCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 3322221 123457889999999999999999999999999998863
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.7e-47 Score=392.44 Aligned_cols=250 Identities=21% Similarity=0.303 Sum_probs=201.5
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhH---HHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGF---DVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.+.. ....... ..++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999764 69999999997532 1122222 3346777788999999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
|+||||++||+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+|||++.+|++||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999997654 6899999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (470)
... ....+||+.|+|||++.. ..|+.++|+||+||++|||++|+.||........ ...........
T Consensus 344 ~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~i~~~~------- 410 (689)
T 3v5w_A 344 KKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMA------- 410 (689)
T ss_dssp SCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHHHHHCC-------
T ss_pred CCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHhhcCCC-------
Confidence 322 234689999999999864 5799999999999999999999999976432221 11111000000
Q ss_pred cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCC-----HHHHHHH
Q 040392 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN-----AREIVAK 447 (470)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~el~~~ 447 (470)
...+..++.++.+|+.+||+.||.+|++ +.||++|
T Consensus 411 ---------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 411 ---------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ---------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 0012234677899999999999999998 7888765
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.7e-47 Score=368.11 Aligned_cols=284 Identities=36% Similarity=0.546 Sum_probs=232.3
Q ss_pred ccccccCHHHHHHhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccc-hhhhhHHHHHHHHhcCCCCcceeEEe
Q 040392 158 ATWRTFSHLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIKVIS 236 (470)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~ 236 (470)
.....++..++....++|++.+.||+|+||.||+|+..+|+.||||++..... .....+.+|+++++.++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 34566788899999999999999999999999999988899999999875432 23446889999999999999999999
Q ss_pred eeccCCeeeEEEecCCCCChHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCC---CeeecCCCCCCeeeCCCC
Q 040392 237 TCSNEEFKALVLEYMPHGSLEKYMYSSN---YILDIFQRLNIMIDVASALEYLHFGYSA---PIIHCDLKPSNVLLDDNM 310 (470)
Q Consensus 237 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~---~i~H~dlkp~Nill~~~~ 310 (470)
++......++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEF 171 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTC
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCC
Confidence 9999999999999999999999997644 34899999999999999999999 66 999999999999999999
Q ss_pred CeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCcc---ccCcchhhH
Q 040392 311 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI---FNGEMTLKH 387 (470)
Q Consensus 311 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~---~~~~~~~~~ 387 (470)
.+||+|||++....... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||... .........
T Consensus 172 ~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 250 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250 (326)
T ss_dssp CEEECCCSSCEECCSSS-SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred CEEeccCccccccCccc-ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence 99999999998764322 22333456999999999998888999999999999999999999999732 223344555
Q ss_pred HhhhhcCCc-ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHH
Q 040392 388 WVNDWLPIS-TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451 (470)
Q Consensus 388 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i 451 (470)
|+....... .....+...... .+...+..+.+++.+||+.||++|||+.|++++|++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 251 WVKGLLKEKKLEALVDVDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHTTTTSSCCSTTSSCTTCTTS------CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHhhchhhhhhcChhhccc------cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 655444433 223333222221 2234577899999999999999999999999999864
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.6e-46 Score=360.32 Aligned_cols=266 Identities=24% Similarity=0.359 Sum_probs=220.5
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|.+.+.||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++||||+++++++.+....++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 467888999999999999999864 6899999998766666778899999999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 330 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 330 (470)
+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999887778999999999999999999999 9999999999999999999999999999998764332211
Q ss_pred ------------cccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccc
Q 040392 331 ------------TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTM 398 (470)
Q Consensus 331 ------------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 398 (470)
......||+.|+|||.+.+..++.++||||||+++|||++|..|+...............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~-------- 237 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVR-------- 237 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHH--------
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhh--------
Confidence 111457999999999999999999999999999999999999998764332221110000
Q ss_pred ccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhh
Q 040392 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~ 458 (470)
.......+..++.++.+++.+||+.||++|||+.|+++.|++++..+...
T Consensus 238 ----------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~ 287 (310)
T 3s95_A 238 ----------GFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH 287 (310)
T ss_dssp ----------HHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHC
T ss_pred ----------ccccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCc
Confidence 00111112345667899999999999999999999999999998776543
No 23
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.2e-46 Score=362.80 Aligned_cols=276 Identities=22% Similarity=0.296 Sum_probs=211.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC----eeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE----FKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~----~~~lv 247 (470)
.++|++.+.||+|+||.||+|++. ++.||||++.... ........|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467999999999999999999885 8999999996543 23344556899999999999999999987643 46899
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CeeecCCCCCCeeeCCCCCeEEeee
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA----------PIIHCDLKPSNVLLDDNMVAHLSDF 317 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~----------~i~H~dlkp~Nill~~~~~~kl~Df 317 (470)
|||+++|+|.+++.... +++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999997644 899999999999999999999 88 9999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccCC-----CCCCCccchhhHHHHHHHHHhCCCCCCccccCcc-hhhHHhhh
Q 040392 318 SIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEM-TLKHWVND 391 (470)
Q Consensus 318 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~-~~~~~~~~ 391 (470)
|+++...............||+.|+|||++.+ ..++.++||||||+++|||++|+.||....+... .+......
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99987755444334445679999999999876 3566789999999999999999999986433211 11110000
Q ss_pred hcCCc-ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 392 WLPIS-TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 392 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
..... ......................++.++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00000 0000000000111111122334577799999999999999999999999999999753
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.3e-46 Score=354.22 Aligned_cols=251 Identities=25% Similarity=0.339 Sum_probs=210.3
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46799999999999999999975 56899999999866655667788999999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 330 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 330 (470)
+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--S 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--C
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--c
Confidence 9999999999765 4899999999999999999999 8999999999999999999999999999998764322 2
Q ss_pred cccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchh
Q 040392 331 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED 410 (470)
Q Consensus 331 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
......||+.|+|||++.+..++.++||||||+++|||++|+.||........ .........+.
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~--------------- 235 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPE--------------- 235 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCSCC---------------
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCC---------------
Confidence 23446799999999999999999999999999999999999999976422211 11111100000
Q ss_pred hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 411 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+..++..+.+++.+||+.||++|||+.|++++
T Consensus 236 --~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 236 --LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp --CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 01123446778999999999999999999999875
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.7e-46 Score=366.59 Aligned_cols=261 Identities=27% Similarity=0.441 Sum_probs=216.0
Q ss_pred hCCCCCCCeecccCceEEEEEEe--------CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcC-CCCcceeEEeeeccC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL--------GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSI-RHRNLIKVISTCSNE 241 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~ 241 (470)
.++|.+.+.||+|+||.||+|++ .++..||||++.... ....+.+.+|+++++.+ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46788999999999999999975 235679999997553 34456788999999999 899999999999999
Q ss_pred CeeeEEEecCCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 040392 242 EFKALVLEYMPHGSLEKYMYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL 306 (470)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill 306 (470)
+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999997653 34789999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchh
Q 040392 307 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTL 385 (470)
Q Consensus 307 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~ 385 (470)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+ +
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--L 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--H
Confidence 9999999999999987654443333444567889999999999999999999999999999999 999997643221 1
Q ss_pred hHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
...+..... ...+..++.++.+++.+||+.||++||++.|++++|+++....
T Consensus 315 ~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 315 FKLLKEGHR------------------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HHHHHTTCC------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCC------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111111100 0112345678999999999999999999999999999997543
No 26
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.4e-46 Score=372.01 Aligned_cols=260 Identities=29% Similarity=0.445 Sum_probs=215.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|.+.+.||+|+||.||+|++. +++.||||++.... ......+.+|+++++.++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467888999999999999999876 68999999987543 3345678889999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
|+++|+|.+++...+..+++..+..++.|++.||+||| +.+++||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999877667899999999999999999999 999999999999999999999999999999865332211
Q ss_pred ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
.......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+.....
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~~~~~~~~-------------- 333 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TREFVEKGGR-------------- 333 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHHHHHTTCC--------------
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--------------
Confidence 11222345778999999988889999999999999999998 999987643321 1222111110
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
...+..++.++.+++.+||+.||++|||+.++++.|+++.+.
T Consensus 334 ----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 334 ----LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 111234577899999999999999999999999999999754
No 27
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2e-44 Score=346.53 Aligned_cols=282 Identities=29% Similarity=0.475 Sum_probs=227.1
Q ss_pred cccccCHHHHHHhhCCCCCC------CeecccCceEEEEEEeCCCcEEEEEEeeccc----chhhhhHHHHHHHHhcCCC
Q 040392 159 TWRTFSHLELCRATDGFSEN------NLIGRGGFGSVYKARLGDGMEVAVKVFNLQC----GRALKGFDVECEMMKSIRH 228 (470)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~------~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h 228 (470)
....|+..++..++++|... +.||+|+||.||+|+. +++.||+|++.... ....+.+.+|+++++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34568889999999998877 8999999999999987 68899999986432 3345678899999999999
Q ss_pred CcceeEEeeeccCCeeeEEEecCCCCChHHhhhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 040392 229 RNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSS--NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL 306 (470)
Q Consensus 229 ~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill 306 (470)
|||+++++++.+.+..++||||+++|+|.+++... ...+++..+..++.|++.||.||| +.+++||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999998643 346899999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhh
Q 040392 307 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK 386 (470)
Q Consensus 307 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~ 386 (470)
+.++.+||+|||++................||+.|+|||.+.+ .++.++||||||+++|+|++|..||........ ..
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LL 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HH
Confidence 9999999999999987654333333345678999999998865 589999999999999999999999987544322 22
Q ss_pred HHhhhhcC--CcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 387 HWVNDWLP--ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 387 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
.+...... .......+..+.. .+..++..+.+++.+||+.||.+|||+.+++++|+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMND-------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCSC-------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhccccccc-------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 22221111 1112222222211 123457789999999999999999999999999999864
No 28
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=6.9e-46 Score=357.04 Aligned_cols=261 Identities=27% Similarity=0.388 Sum_probs=205.6
Q ss_pred HhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 170 RATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 170 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
...++|++.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++......++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456788999999999999999987 58899999986543 33456788999999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 248 LEYMPHGSLEKYMYSSN--YILDIFQRLNIMIDVASALEYLHFGYSAP--IIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
|||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 189 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLK 189 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-----
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccc
Confidence 99999999999997654 23899999999999999999999 888 999999999999999999999999999754
Q ss_pred CCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392 324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403 (470)
Q Consensus 324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (470)
... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||......+. ...+..... .
T Consensus 190 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~--~~~~~~~~~--~------ 257 (309)
T 3p86_A 190 AST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQV--VAAVGFKCK--R------ 257 (309)
T ss_dssp --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHHSCC--C------
T ss_pred ccc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHhcCC--C------
Confidence 322 2223346789999999999999999999999999999999999999976432211 111110000 0
Q ss_pred cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
...+..++.++.+++.+||+.||++|||+.|+++.|+.+..+.
T Consensus 258 ---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 258 ---------LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp ---------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred ---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 0112334677899999999999999999999999999987543
No 29
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=358.03 Aligned_cols=260 Identities=27% Similarity=0.439 Sum_probs=212.7
Q ss_pred hCCCCCCCeecccCceEEEEEEeC----CCcEEEEEEeecc-cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQ-CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
.++|.+.+.||+|+||.||+|.+. .+..||||++... .....+.+.+|+++++.++||||+++++++.+....++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356888899999999999999874 3556999999754 33445678899999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999877678999999999999999999999 899999999999999999999999999999876443
Q ss_pred CC-cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 327 DQ-SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 327 ~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
.. ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+.....
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~---------- 272 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEGYR---------- 272 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTTCC----------
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcCCC----------
Confidence 22 222233456788999999988899999999999999999999 999997643321 1111111100
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
...+..++.++.+++.+||..||++|||+.|+++.|+++..+
T Consensus 273 --------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 273 --------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred --------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 011234577799999999999999999999999999999754
No 30
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.8e-45 Score=345.74 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=213.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+....++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 357888999999999999999998899999999975432 3456889999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCccc
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 331 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 331 (470)
++++|.+++......+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++....... ...
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccc
Confidence 999999999877777999999999999999999999 9999999999999999999999999999998654221 122
Q ss_pred ccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCchh
Q 040392 332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED 410 (470)
Q Consensus 332 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
.....+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||......+ ....+......
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--~~~~~~~~~~~--------------- 226 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFRL--------------- 226 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCCC---------------
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHhcCccC---------------
Confidence 233456788999999988899999999999999999999 999987643221 11111110000
Q ss_pred hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 411 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
..+..++.++.+++.+||+.||++||++.|++++|+++.+
T Consensus 227 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 227 ---YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 0112235668899999999999999999999999999875
No 31
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.9e-45 Score=361.53 Aligned_cols=271 Identities=23% Similarity=0.383 Sum_probs=219.3
Q ss_pred ccCHHHHHHhhCCCCCCCeecccCceEEEEEEe------CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcC-CCCccee
Q 040392 162 TFSHLELCRATDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSI-RHRNLIK 233 (470)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~ 233 (470)
.+.........++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 344555666778999999999999999999973 346889999997543 33456788999999999 7899999
Q ss_pred EEeeeccCC-eeeEEEecCCCCChHHhhhcCCC-----------------------------------------------
Q 040392 234 VISTCSNEE-FKALVLEYMPHGSLEKYMYSSNY----------------------------------------------- 265 (470)
Q Consensus 234 ~~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------- 265 (470)
+++++.+.+ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999987754 48899999999999999976532
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 266 ------------------ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 266 ------------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
.+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1889999999999999999999 8999999999999999999999999999998765444
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
.........+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+.... .+.......
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~~~~~~~~---------- 316 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-RLKEGTRMR---------- 316 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH-HHHHTCCCC----------
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHH-HHHcCCCCC----------
Confidence 4444455678999999999988899999999999999999998 9999976443322111 111111100
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
.+..++.++.+++.+||+.||++|||+.|++++|+++..+
T Consensus 317 --------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 317 --------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 1122466789999999999999999999999999999754
No 32
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=6.8e-46 Score=354.76 Aligned_cols=276 Identities=25% Similarity=0.409 Sum_probs=211.8
Q ss_pred hCCCCCCCeecccCceEEEEEEe-----CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeecc--CCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN--EEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~ 244 (470)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|+++++.++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788999999999999999974 3688999999987666667788999999999999999999999854 3567
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 8999999999999999887767999999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcc-ccccc
Q 040392 325 GEDQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIST-MEVVG 402 (470)
Q Consensus 325 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 402 (470)
..... .......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ...+......... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHH
Confidence 33221 2223445777899999999889999999999999999999999998753211 0000000000000 00000
Q ss_pred ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 403 ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
..+ ........+..++.++.+++.+||+.||++|||+.|+++.|+++.+++
T Consensus 243 ~~~--~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 243 ELL--KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHH--HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHH--hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 000 000011123456788999999999999999999999999999998654
No 33
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.4e-45 Score=345.94 Aligned_cols=257 Identities=25% Similarity=0.410 Sum_probs=214.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
.++|++.+.||+|+||.||+|+..++..||+|++..... ..+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467889999999999999999998888999999975432 3456889999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCccc
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 331 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 331 (470)
++++|.+++......+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++....... ...
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhc
Confidence 999999999877667999999999999999999999 8999999999999999999999999999998764332 222
Q ss_pred ccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCchh
Q 040392 332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED 410 (470)
Q Consensus 332 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
.....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+.. ....... ..
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~~~~-~~--------------- 224 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVV-LKVSQGH-RL--------------- 224 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-HHHHTTC-CC---------------
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHH-HHHHcCC-CC---------------
Confidence 234456778999999988889999999999999999999 99999764332211 1110000 00
Q ss_pred hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 411 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
..+..++.++.+++.+||+.||++|||+.|++++|+++++
T Consensus 225 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 225 ---YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp ---CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred ---CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 0012235668899999999999999999999999999864
No 34
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.4e-45 Score=354.50 Aligned_cols=254 Identities=23% Similarity=0.334 Sum_probs=208.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999865 78999999986543 2334678899999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
|+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..+......
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999999654 35899999999999999999999 999999999999999999999999999999866433333
Q ss_pred ccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 330 MTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
.......||+.|+|||++.+..+ +.++||||||+++|||++|+.||............|........
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~------------ 229 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN------------ 229 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTST------------
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCC------------
Confidence 33345679999999999987765 77899999999999999999999875444333333322211100
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
....++.++.+|+.+||+.||++|||+.|++++
T Consensus 230 ------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 230 ------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 012346678899999999999999999999876
No 35
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=5e-45 Score=350.76 Aligned_cols=264 Identities=26% Similarity=0.422 Sum_probs=208.1
Q ss_pred hhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
..++|.+.+.||+|+||.||+|++. ..+|+|+++.. .....+.+.+|+++++.++||||+++++++.. +..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 3568999999999999999999874 35899988643 23455778899999999999999999998764 4578999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999999877778999999999999999999999 89999999999999999999999999999986543333
Q ss_pred cccccccccCccccCccccC---CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 329 SMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
........||+.|+|||++. +..++.++||||||+++|||++|+.||......+.................
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~------ 261 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSK------ 261 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTT------
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhh------
Confidence 33344567999999999875 567889999999999999999999999865433221111111111110000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
....++.++.+++.+||+.||++||++.|++++|+.+..++
T Consensus 262 ---------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 262 ---------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ---------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ---------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 01234677999999999999999999999999999987544
No 36
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.1e-45 Score=353.06 Aligned_cols=248 Identities=25% Similarity=0.321 Sum_probs=207.0
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++++.++||||+++++++......++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 56899999999999999999986 57999999999754 2344567889999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-- 167 (328)
T ss_dssp CCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS--
T ss_pred ECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC--
Confidence 9999999999997654 5899999999999999999999 899999999999999999999999999999866432
Q ss_pred cccccccccCccccCccccCCCCCC-CccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRVS-TNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~~-~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
......+||+.|+|||++.+..++ .++||||+||++|||++|+.||......+ +...+. ....
T Consensus 168 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i~---~~~~---------- 231 (328)
T 3fe3_A 168 -GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE--LRERVL---RGKY---------- 231 (328)
T ss_dssp -CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH---HCCC----------
T ss_pred -CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHH---hCCC----------
Confidence 223456799999999999887765 78999999999999999999997642211 111111 0000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+++.+||..||.+|||+.|+++|
T Consensus 232 ------~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 232 ------RIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ------CCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ------CCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0112235678899999999999999999999876
No 37
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3e-45 Score=361.66 Aligned_cols=260 Identities=25% Similarity=0.470 Sum_probs=203.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeC----CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
.++|.+.+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|++++++++||||+++++++.+....++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999764 57789999987542 3445678899999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999877778999999999999999999999 899999999999999999999999999999876432
Q ss_pred CCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 327 DQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 327 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
... .......++..|+|||++.+..++.++||||||+++|||++ |+.||......+ ....+....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~~~i~~~~----------- 267 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VIKAVDEGY----------- 267 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HHHHHHTTE-----------
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC-----------
Confidence 211 11222345778999999998899999999999999999998 999997643221 111111100
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
....+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 268 -------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 268 -------RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp -------ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -------CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 0011224567799999999999999999999999999999754
No 38
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.3e-44 Score=348.38 Aligned_cols=261 Identities=24% Similarity=0.307 Sum_probs=213.8
Q ss_pred ccCHHHHHHhhCC----------CCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCc
Q 040392 162 TFSHLELCRATDG----------FSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN 230 (470)
Q Consensus 162 ~~~~~~~~~~~~~----------~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 230 (470)
.++..++..+++. |...+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.+++.++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 3556666665543 566778999999999999876 79999999998766666677889999999999999
Q ss_pred ceeEEeeeccCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC
Q 040392 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM 310 (470)
Q Consensus 231 Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~ 310 (470)
|+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCC
Confidence 999999999999999999999999999998653 5899999999999999999999 89999999999999999999
Q ss_pred CeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhh
Q 040392 311 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVN 390 (470)
Q Consensus 311 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~ 390 (470)
.+||+|||++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.
T Consensus 179 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~~~ 254 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLR 254 (321)
T ss_dssp CEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHH
T ss_pred cEEEeeeeeeeecccCc--cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHh
Confidence 99999999998764322 1233467999999999999999999999999999999999999999753221 1111111
Q ss_pred hhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 391 DWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+.. . .....++.++.+++.+||+.||++|||+.|++++
T Consensus 255 ~~~~~~--------~--------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 255 DSPPPK--------L--------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp HSSCCC--------C--------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCCCC--------c--------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111110 0 0112346678999999999999999999999986
No 39
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.2e-45 Score=347.13 Aligned_cols=257 Identities=23% Similarity=0.419 Sum_probs=210.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
.++|++.+.||+|+||.||+|++.++..||+|++..... ..+.+.+|+++++.++||||+++++++.+....++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 567889999999999999999998888999999975432 3456889999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCccc
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 331 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 331 (470)
++++|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++....... ...
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~ 177 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTS 177 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-ccc
Confidence 999999999876667999999999999999999999 8999999999999999999999999999998654221 122
Q ss_pred ccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCchh
Q 040392 332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED 410 (470)
Q Consensus 332 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
.....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+......
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~--~~~~~~~~~~--------------- 240 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--AEHIAQGLRL--------------- 240 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHHHTTCCC---------------
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH--HHHHhcccCC---------------
Confidence 223456788999999998889999999999999999998 9999976433211 1111110000
Q ss_pred hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 411 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
..+..++..+.+++.+||+.||++|||+.|++++|+++.+
T Consensus 241 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 241 ---YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp ---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 0112235668899999999999999999999999999864
No 40
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.1e-45 Score=353.97 Aligned_cols=252 Identities=25% Similarity=0.346 Sum_probs=199.6
Q ss_pred hhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
..++|++.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357899999999999999999975 579999999987543 334567889999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~- 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK- 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-
Confidence 9999999999996654 5899999999999999999999 8999999999999999999999999999987654322
Q ss_pred cccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
........||+.|+|||++.+..+ +.++|||||||++|||++|..||...... .....+.. ...
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~--~~~~~i~~---~~~---------- 227 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM--ALYKKIMR---GKY---------- 227 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---TCC----------
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHc---CCC----------
Confidence 222344579999999999988775 88999999999999999999999763221 11111110 000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
..+..++.++.+++.+||+.||++|||+.|++++-
T Consensus 228 ------~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 228 ------DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 01122356688999999999999999999999863
No 41
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.2e-44 Score=343.99 Aligned_cols=265 Identities=25% Similarity=0.374 Sum_probs=205.7
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhc--CCCCcceeEEeeecc----CCeee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKS--IRHRNLIKVISTCSN----EEFKA 245 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~~~~~~~~----~~~~~ 245 (470)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 56899999999999999999988 6899999998643 33445567777666 799999999998643 35678
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeeCCCCCeEEeeeccc
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SAPIIHCDLKPSNVLLDDNMVAHLSDFSIA 320 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a 320 (470)
+||||+++|+|.+++... .+++..++.++.|++.||+|||... +.+|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999543 5899999999999999999999322 578999999999999999999999999999
Q ss_pred cccCCCCCcc--cccccccCccccCccccCCC------CCCCccchhhHHHHHHHHHhC----------CCCCCccccCc
Q 040392 321 KLLTGEDQSM--TQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLMETFTG----------KKPTNEIFNGE 382 (470)
Q Consensus 321 ~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~DvwslGv~l~el~tg----------~~p~~~~~~~~ 382 (470)
.......... ......||+.|+|||++.+. .++.++||||||+++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 8664332221 12334799999999998876 456799999999999999999 77776654443
Q ss_pred chhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHH
Q 040392 383 MTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i 451 (470)
.................. .........++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 241 PSFEDMRKVVCVDQQRPN---------IPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CCHHHHHHHHTTSCCCCC---------CCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cchhhhhHHHhccCCCCC---------CChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 333332222111110000 001112234578899999999999999999999999999986
No 42
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.1e-44 Score=345.92 Aligned_cols=269 Identities=23% Similarity=0.294 Sum_probs=208.4
Q ss_pred hhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
..++|++.+.||+|+||+||+|+..+|+.||+|++.... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 357899999999999999999999889999999986542 223466788999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
||+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-- 172 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP-- 172 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC--
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCC--
Confidence 99985 898888877777999999999999999999999 899999999999999999999999999999876422
Q ss_pred cccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC---ccccccc--
Q 040392 329 SMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI---STMEVVG-- 402 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-- 402 (470)
........+|+.|+|||++.+ ..++.++||||||+++|||++|+.||......+. +.......... ......+
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHCCCCTTTSGGGTTSH
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHCCCChHHhhhhhccc
Confidence 222334568999999998876 5689999999999999999999999986544322 22221111100 0000000
Q ss_pred ------ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 403 ------ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 403 ------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..... ..........++.++.+|+.+||+.||++|||+.|+++|
T Consensus 252 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 252 LWKQRTFQVFE-KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HHHSCCCCCCC-CCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhccccccc-CCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00000 000111223446778999999999999999999999874
No 43
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-45 Score=358.33 Aligned_cols=265 Identities=26% Similarity=0.421 Sum_probs=214.6
Q ss_pred HhhCCCCCCCeecccCceEEEEEEeC------CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCC
Q 040392 170 RATDGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEE 242 (470)
Q Consensus 170 ~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~ 242 (470)
...++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578999999999999999999864 35889999997553 334567889999999999999999999999999
Q ss_pred eeeEEEecCCCCChHHhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 040392 243 FKALVLEYMPHGSLEKYMYSSN-----------------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dl 299 (470)
..++||||+++|+|.+++.... ..+++..++.++.|+++||.||| +.+|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 9999999999999999997642 46899999999999999999999 899999999
Q ss_pred CCCCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCcc
Q 040392 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEI 378 (470)
Q Consensus 300 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~ 378 (470)
||+||+++.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999987643332233344568899999999988889999999999999999999 99999764
Q ss_pred ccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhh
Q 040392 379 FNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLR 457 (470)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~ 457 (470)
...+ ....+... ... ..+..++.++.+++.+||+.||++||++.+++++|+++.++...
T Consensus 281 ~~~~--~~~~~~~~---~~~---------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~ 339 (343)
T 1luf_A 281 AHEE--VIYYVRDG---NIL---------------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG 339 (343)
T ss_dssp CHHH--HHHHHHTT---CCC---------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC----
T ss_pred ChHH--HHHHHhCC---CcC---------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhh
Confidence 3221 11111110 000 01224467799999999999999999999999999999766544
No 44
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-44 Score=357.06 Aligned_cols=264 Identities=27% Similarity=0.419 Sum_probs=217.3
Q ss_pred hCCCCCCCeecccCceEEEEEEe--------CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcC-CCCcceeEEeeeccC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL--------GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSI-RHRNLIKVISTCSNE 241 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~ 241 (470)
.++|.+.+.||+|+||.||+|+. .++..||||++.... ......+.+|+++++.+ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 46788999999999999999975 234679999997553 34456788999999999 899999999999999
Q ss_pred CeeeEEEecCCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 040392 242 EFKALVLEYMPHGSLEKYMYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL 306 (470)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill 306 (470)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999997654 35899999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchh
Q 040392 307 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTL 385 (470)
Q Consensus 307 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~ 385 (470)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |..||...... .+
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~~ 302 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--EL 302 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 9999999999999987654443344445567889999999999999999999999999999999 99998764322 11
Q ss_pred hHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhh
Q 040392 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~ 458 (470)
...+...... ..+..++.++.+++.+||+.||++|||+.|++++|+++.......
T Consensus 303 ~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 357 (382)
T 3tt0_A 303 FKLLKEGHRM------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQ 357 (382)
T ss_dssp HHHHHTTCCC------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSC
T ss_pred HHHHHcCCCC------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcC
Confidence 1111111100 011234677999999999999999999999999999997654433
No 45
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-44 Score=349.92 Aligned_cols=253 Identities=20% Similarity=0.296 Sum_probs=209.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|.+.+.||+|+||.||+|... +++.||+|.+... ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999865 5889999998644 33445678899999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC--CCCeEEeeeccccccCCCCC
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD--NMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~ 328 (470)
+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999877667999999999999999999999 899999999999999987 7899999999998764322
Q ss_pred cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
......+|+.|+|||++.+..++.++||||||+++|+|++|..||......+ ............
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~------------- 222 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAEYTF------------- 222 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCC-------------
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHHHHcCCCCC-------------
Confidence 2334578999999999998889999999999999999999999997643221 111111111000
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
.......++.++.+++.+||..||++|||+.|+++|-
T Consensus 223 ---~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 223 ---DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp ---CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ---ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 0111224467789999999999999999999999863
No 46
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6e-45 Score=353.49 Aligned_cols=258 Identities=25% Similarity=0.405 Sum_probs=205.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcE----EEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGME----VAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 245 (470)
.++|++.+.||+|+||.||+|++. +++. ||+|.+.... ....+.+.+|+.+++.++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 356889999999999999999854 4443 5888775432 345567889999999999999999999998765 67
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+|+||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 899999999999999887778999999999999999999999 89999999999999999999999999999987755
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
...........+|..|+|||.+.+..++.++||||||+++|||++ |+.||......+ +...+......
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~~~~~~~--------- 238 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGERL--------- 238 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCC---------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHHHHHcCCCC---------
Confidence 444444445567889999999999999999999999999999999 999997643322 22222111100
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
..+..++.++.+++.+||+.||++||++.|++++|+++..
T Consensus 239 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 239 ---------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp ---------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0122346678999999999999999999999999999864
No 47
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.7e-44 Score=347.81 Aligned_cols=262 Identities=22% Similarity=0.373 Sum_probs=216.7
Q ss_pred hCCCCCCCeecccCceEEEEEEe------CCCcEEEEEEeecccc-hhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRNLIKVISTCSNEEF 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~ 243 (470)
.++|.+.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46789999999999999999974 3478899999975532 3456788999999999 89999999999999999
Q ss_pred eeEEEecCCCCChHHhhhcCCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 040392 244 KALVLEYMPHGSLEKYMYSSNY-----------------ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL 306 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill 306 (470)
.++||||+++|+|.+++..... .+++..++.++.|+++||.||| +.+++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999976543 4899999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchh
Q 040392 307 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTL 385 (470)
Q Consensus 307 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~ 385 (470)
+.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........ .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~ 257 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-F 257 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-H
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-H
Confidence 9999999999999987754443333444567889999999988899999999999999999999 9999976543321 1
Q ss_pred hHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
...+...... ..+..++.++.+++.+||+.||.+|||+.|++++|+++....
T Consensus 258 ~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 258 YKMIKEGFRM------------------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHHTCCC------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred HHHhccCCCC------------------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 2211111110 011234667899999999999999999999999999987653
No 48
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-44 Score=352.82 Aligned_cols=264 Identities=23% Similarity=0.361 Sum_probs=213.2
Q ss_pred hhCCCCCCCeecccCceEEEEEEe------CCCcEEEEEEeecc-cchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCC
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQ-CGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEE 242 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~ 242 (470)
..++|.+.+.||+|+||.||+|+. .++..||+|++... .....+.+.+|+.+++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457889999999999999999985 24668999999754 234556788999999999 8999999999999999
Q ss_pred eeeEEEecCCCCChHHhhhcCCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNY----------------------ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlk 300 (470)
..++||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 99999999999999999976542 3789999999999999999999 8999999999
Q ss_pred CCCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccc
Q 040392 301 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIF 379 (470)
Q Consensus 301 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~ 379 (470)
|+||+++.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||+| |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987654443334445567889999999988899999999999999999998 999997754
Q ss_pred cCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHh
Q 040392 380 NGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456 (470)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~ 456 (470)
... .....+...... ..+..++.++.+++.+||+.||.+|||+.|++++|+.+.....
T Consensus 280 ~~~-~~~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 280 VDA-NFYKLIQNGFKM------------------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CSH-HHHHHHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred cHH-HHHHHHhcCCCC------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 332 222222211110 0112346678999999999999999999999999999875543
No 49
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.3e-44 Score=348.74 Aligned_cols=259 Identities=25% Similarity=0.403 Sum_probs=214.8
Q ss_pred hCCCCCCCeecccCceEEEEEEe------CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
.++|.+.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+++++.++||||+++++++.+....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 56788999999999999999975 345889999997543 34456788999999999999999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 040392 245 ALVLEYMPHGSLEKYMYSSN-----------------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKP 301 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp 301 (470)
++||||+++|+|.+++.... ..+++..++.++.|+++||.||| +.+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999997643 23789999999999999999999 89999999999
Q ss_pred CCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCcccc
Q 040392 302 SNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFN 380 (470)
Q Consensus 302 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~ 380 (470)
+||+++.++.+||+|||++................+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654443334445567889999999988889999999999999999999 9999976433
Q ss_pred CcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 381 GEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
.+ +...+...... ..+..++.++.+++.+||+.||++||++.|++++|+++..
T Consensus 259 ~~--~~~~~~~~~~~------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ER--LFNLLKTGHRM------------------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GG--HHHHHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH--HHHHhhcCCcC------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22 11111111100 0112346778999999999999999999999999999864
No 50
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.9e-44 Score=347.72 Aligned_cols=249 Identities=22% Similarity=0.291 Sum_probs=206.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+.. +|+.||+|++... .......+..|+++++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467899999999999999999865 6899999999754 233456678899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999987544 6899999999999999999999 8999999999999999999999999999998643221
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
......+||+.|+|||++.+..++.++|+||||+++|||++|+.||......+ +...+.. ...
T Consensus 160 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~i~~---~~~---------- 222 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILM---EEI---------- 222 (337)
T ss_dssp --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH---CCC----------
T ss_pred --CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH--HHHHHHc---CCC----------
Confidence 22345679999999999999999999999999999999999999997532211 1111100 000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCC-----CHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-----NAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~el~~~ 447 (470)
..+..++.++.+++.+||+.||++|| ++.|+++|
T Consensus 223 ------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 223 ------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 01123466789999999999999999 89999876
No 51
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=4.3e-44 Score=342.20 Aligned_cols=260 Identities=25% Similarity=0.434 Sum_probs=207.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999754 68999999985432 33456788999999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999997654 6899999999999999999999 8999999999999999999999999999998654322
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
........||+.|+|||.+.+..++.++||||||+++|||++|+.||............ .....+
T Consensus 166 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~-~~~~~~------------- 230 (294)
T 4eqm_A 166 -LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH-IQDSVP------------- 230 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH-HSSCCC-------------
T ss_pred -ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-hhccCC-------------
Confidence 12223456899999999999999999999999999999999999999764322111111 000000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCC-CHHHHHHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-NAREIVAKLLKIR 452 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~el~~~L~~i~ 452 (470)
.........++..+.+++.+||..||++|| +++++.+.|+++.
T Consensus 231 --~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 231 --NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp --CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred --CcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 011111234577899999999999999999 8999999998875
No 52
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-44 Score=356.94 Aligned_cols=260 Identities=23% Similarity=0.389 Sum_probs=212.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeC------CCcEEEEEEeecc-cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQ-CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
.++|++.+.||+|+||.||+|++. ++..||||++... .......+..|+.+++.++||||+++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 357888999999999999999843 4678999998644 334455688899999999999999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---CeEEe
Q 040392 245 ALVLEYMPHGSLEKYMYSSN------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM---VAHLS 315 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~---~~kl~ 315 (470)
++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997643 45899999999999999999999 99999999999999999555 59999
Q ss_pred eeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcC
Q 040392 316 DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLP 394 (470)
Q Consensus 316 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 394 (470)
|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||...... .....+.....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~i~~~~~ 304 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGR 304 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC
Confidence 9999986543333333345668999999999988899999999999999999998 99998764322 11111111110
Q ss_pred CcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
. ..+..++..+.+++.+||+.||++||++.|++++|+.+...
T Consensus 305 ~------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 305 M------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp C------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C------------------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 0 01223466789999999999999999999999999998754
No 53
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.1e-44 Score=351.42 Aligned_cols=252 Identities=22% Similarity=0.317 Sum_probs=207.2
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccch------hhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGR------ALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
.+.|++.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+....
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 567999999999999999999865 6899999999754322 245688999999999999999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----CeEEeeeccc
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM----VAHLSDFSIA 320 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~----~~kl~Dfg~a 320 (470)
++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999654 46899999999999999999999 89999999999999998877 7999999999
Q ss_pred cccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccc
Q 040392 321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV 400 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (470)
....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||......+ .+..... ...
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~-~~~~i~~----~~~--- 235 (361)
T 2yab_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANITA----VSY--- 235 (361)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHT----TCC---
T ss_pred eEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh----cCC---
Confidence 8764322 2234579999999999999899999999999999999999999997632221 1111110 000
Q ss_pred ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ........++.++.+++.+||..||++|||+.|+++|
T Consensus 236 ------~---~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 236 ------D---FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp ------C---CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ------C---CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0 0011123446778999999999999999999999864
No 54
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.5e-44 Score=342.95 Aligned_cols=259 Identities=27% Similarity=0.430 Sum_probs=198.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|++.+.||+|+||.||+|+.. ..||+|++.... ....+.+.+|+++++.++||||+++++++. ....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEE
Confidence 567999999999999999999874 359999986543 345577889999999999999999999764 456789999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
|+++++|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999877778999999999999999999999 899999999999999999999999999999865433333
Q ss_pred ccccccccCccccCccccC---CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh-cCCcccccccccc
Q 040392 330 MTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW-LPISTMEVVGANL 405 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 405 (470)
.......||+.|+|||.+. +..++.++||||||+++|||++|+.||......+. ....+... .......
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~------ 249 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIEMVGRGSLSPDLSK------ 249 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HHHHHHHTSCCCCTTS------
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HHHHhcccccCcchhh------
Confidence 3334567899999999886 56688899999999999999999999986443322 22222111 1110000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR 452 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~ 452 (470)
....++.++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 250 ---------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 250 ---------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp ---------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ---------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 01234677999999999999999999999999999874
No 55
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-43 Score=342.65 Aligned_cols=270 Identities=24% Similarity=0.365 Sum_probs=207.3
Q ss_pred HHHHhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcC--CCCcceeEEeeeccC---
Q 040392 167 ELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI--RHRNLIKVISTCSNE--- 241 (470)
Q Consensus 167 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~~~~~~~~~--- 241 (470)
......++|++.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++..+ +||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 33445678999999999999999999885 899999998643 223344566666554 899999999998776
Q ss_pred -CeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CeeecCCCCCCeeeCCCCCe
Q 040392 242 -EFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA--------PIIHCDLKPSNVLLDDNMVA 312 (470)
Q Consensus 242 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~--------~i~H~dlkp~Nill~~~~~~ 312 (470)
...++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 6889999999999999999665 4899999999999999999999 77 99999999999999999999
Q ss_pred EEeeeccccccCCCCCc--ccccccccCccccCccccCCCCCCCc------cchhhHHHHHHHHHhC----------CCC
Q 040392 313 HLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGRVSTN------GDVYSFGIMLMETFTG----------KKP 374 (470)
Q Consensus 313 kl~Dfg~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~------~DvwslGv~l~el~tg----------~~p 374 (470)
||+|||++..+...... .......||+.|+|||++.+...+.+ +||||||+++|||++| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999766433222 11234579999999999987766665 9999999999999999 555
Q ss_pred CCccccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 375 TNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
|............+......... ............++.++.+++.+||+.||++|||+.|++++|+++.++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMREIVCIKKL---------RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCC---------CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HhhhcCCCCchhhhHHHHhhhcc---------CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 55443333222222211111110 111111122346788899999999999999999999999999999754
No 56
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.3e-43 Score=337.52 Aligned_cols=253 Identities=26% Similarity=0.434 Sum_probs=207.0
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccch-------hhhhHHHHHHHHhcCCCCcceeEEeeeccCCe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGR-------ALKGFDVECEMMKSIRHRNLIKVISTCSNEEF 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 243 (470)
.++|++.+.||+|+||.||+|+. .+++.||+|++...... ..+.+.+|+++++.++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46789999999999999999986 47899999998644321 1267889999999999999999999997765
Q ss_pred eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCC-----eEEee
Q 040392 244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP--IIHCDLKPSNVLLDDNMV-----AHLSD 316 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dlkp~Nill~~~~~-----~kl~D 316 (470)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+ ++||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999999877778999999999999999999999 888 999999999999988776 99999
Q ss_pred eccccccCCCCCcccccccccCccccCccccC--CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcC
Q 040392 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR--EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394 (470)
Q Consensus 317 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~--~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (470)
||++..... ......+|+.|+|||.+. ...++.++||||||+++|||++|+.||...................
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 247 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL 247 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC
T ss_pred CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC
Confidence 999974432 233467899999999984 4557899999999999999999999998754443322222111100
Q ss_pred CcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHH
Q 040392 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i 451 (470)
. ...+..++.++.+++.+||+.||++|||+.|+++.|+++
T Consensus 248 ~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 248 R-----------------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp C-----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred C-----------------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 001233467799999999999999999999999999864
No 57
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.2e-44 Score=346.84 Aligned_cols=264 Identities=19% Similarity=0.194 Sum_probs=215.2
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+..|+++++.+ +||||+++++++......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46799999999999999999985 578999999987542 345688999999999 89999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC-----eEEeeeccccccC
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV-----AHLSDFSIAKLLT 324 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~-----~kl~Dfg~a~~~~ 324 (470)
|+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++..+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 89999999876678999999999999999999999 899999999999999999887 9999999998764
Q ss_pred CCCCcc-----cccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcch--hhHHhhhhcCCcc
Q 040392 325 GEDQSM-----TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT--LKHWVNDWLPIST 397 (470)
Q Consensus 325 ~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~ 397 (470)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... +........+..
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~- 240 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATP- 240 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSC-
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCC-
Confidence 432211 124567999999999999999999999999999999999999999875332211 111100000000
Q ss_pred cccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhh
Q 040392 398 MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLR 457 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~ 457 (470)
.......++ ++.+++..||+.||.+||++.+|.+.|+++..+...
T Consensus 241 --------------~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~ 285 (330)
T 2izr_A 241 --------------IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGY 285 (330)
T ss_dssp --------------HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred --------------HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 000112245 899999999999999999999999999998876544
No 58
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.6e-43 Score=338.60 Aligned_cols=266 Identities=14% Similarity=0.127 Sum_probs=217.7
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|++.+.||+|+||.||+|.. .+++.||+|++... .....+.+|+++++.+ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999985 57999999998643 3445688899999999 79999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC-----eEEeeeccccccC
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV-----AHLSDFSIAKLLT 324 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~-----~kl~Dfg~a~~~~ 324 (470)
|+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++....
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 89999999877767999999999999999999999 999999999999999987776 9999999998765
Q ss_pred CCCCc-----ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcch--hhHHhhhhcCCcc
Q 040392 325 GEDQS-----MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT--LKHWVNDWLPIST 397 (470)
Q Consensus 325 ~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~ 397 (470)
..... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||......... +...........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 241 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP- 241 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC-
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc-
Confidence 43221 1234567999999999999999999999999999999999999999874332211 111000000000
Q ss_pred cccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhh
Q 040392 398 MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~ 458 (470)
.......++.++.+++.+||+.||++||++.+|++.|+++..+....
T Consensus 242 --------------~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~ 288 (298)
T 1csn_A 242 --------------LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT 288 (298)
T ss_dssp --------------HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred --------------HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence 00111245778999999999999999999999999999998766543
No 59
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1e-44 Score=351.52 Aligned_cols=258 Identities=22% Similarity=0.379 Sum_probs=208.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcE----EEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGME----VAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 245 (470)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+.... ......+.+|+.+++.++||||+++++++. ....+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357888999999999999999854 4443 7888775432 344566788999999999999999999986 45678
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999999877667899999999999999999999 89999999999999999999999999999998765
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
...........++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~~~-------- 237 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLLEKGERLA-------- 237 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHHHTTCBCC--------
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCCCC--------
Confidence 544444455678889999999998899999999999999999999 999998643322 222221111100
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
.+..++.++.+++.+||..||++||++.|++++|+++..
T Consensus 238 ----------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 238 ----------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp ----------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred ----------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 011234457899999999999999999999999999864
No 60
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.3e-44 Score=362.27 Aligned_cols=252 Identities=30% Similarity=0.454 Sum_probs=209.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC-eeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE-FKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-~~~lv~e~ 250 (470)
.++|++.+.||+|+||.||+|.+. |+.||||+++... ..+.+.+|++++++++||||+++++++.+.. ..++||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 467888899999999999999885 7899999997543 4567899999999999999999999986654 78999999
Q ss_pred CCCCChHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 251 MPHGSLEKYMYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
+++|+|.+++..... .+++..+..++.|++.||+||| +++++||||||+|||++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999987653 4689999999999999999999 899999999999999999999999999999854321
Q ss_pred ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+....
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~i~~~~--------------- 403 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRVEKGY--------------- 403 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--HHHHHTTC---------------
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHHHcCC---------------
Confidence 122357889999999999999999999999999999998 9999986543321 11111110
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
+...+..++.++.+++.+||+.||++|||+.++++.|+++...
T Consensus 404 ---~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 404 ---KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 0112345678899999999999999999999999999998743
No 61
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5e-45 Score=365.92 Aligned_cols=261 Identities=19% Similarity=0.243 Sum_probs=210.5
Q ss_pred HHHHhhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCC
Q 040392 167 ELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEE 242 (470)
Q Consensus 167 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~ 242 (470)
++....++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+..|..++..++||||+++++++.+..
T Consensus 68 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred cccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 34455688999999999999999999875 47899999997532 233455889999999999999999999999999
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++||||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 148 ~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~ 224 (437)
T 4aw2_A 148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLK 224 (437)
T ss_dssp EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence 999999999999999999876667999999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCccccCccccC-----CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcc
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIST 397 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (470)
..... .......+||+.|+|||++. ...++.++|||||||++|||++|+.||......+. .............
T Consensus 225 ~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~~~~~ 302 (437)
T 4aw2_A 225 LMEDG-TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHKERFQF 302 (437)
T ss_dssp CCTTS-CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHCCC
T ss_pred cccCC-CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-HHhhhhccccccC
Confidence 64322 22334467999999999986 56789999999999999999999999976432211 1111110000000
Q ss_pred cccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccC--CCCHHHHHHH
Q 040392 398 MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQ--RINAREIVAK 447 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~el~~~ 447 (470)
+.. ...++.++.+|+.+||..+|++ ||++.|+++|
T Consensus 303 -----p~~----------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 303 -----PTQ----------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp -----CSS----------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred -----Ccc----------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 000 0123667899999999999888 9999999876
No 62
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.8e-44 Score=341.53 Aligned_cols=268 Identities=21% Similarity=0.280 Sum_probs=204.3
Q ss_pred CCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
++|++.+.||+|+||.||+|+..+|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788999999999999999998889999999986543 22346678899999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 330 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 330 (470)
+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--c
Confidence 975 999999877677999999999999999999999 8999999999999999999999999999998664221 2
Q ss_pred cccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc--------ccccc
Q 040392 331 TQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS--------TMEVV 401 (470)
Q Consensus 331 ~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 401 (470)
......+|+.|+|||++.+. .++.++||||||+++|||++|+.||......+. +........... .....
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHHCCCChhhchhhhccccc
Confidence 22345689999999998764 589999999999999999999999976433221 111111100000 00000
Q ss_pred cccccCchh-hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 402 GANLLSQED-IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 402 ~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
++....... ........++.++.+++.+||+.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 100000000 0001112346778999999999999999999999875
No 63
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-44 Score=348.90 Aligned_cols=247 Identities=26% Similarity=0.388 Sum_probs=204.1
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|.+.+.||+|+||.||+|.. .+++.||+|++.... ......+.+|+++++.++||||+++++++......++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999986 578999999987542 22345688999999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+ +|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 679999886654 5899999999999999999999 8999999999999999999999999999998654322
Q ss_pred CcccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
.....+||+.|+|||++.+..+ +.++||||||+++|+|++|+.||......+.. ..+....
T Consensus 163 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~--------------~~i~~~~- 224 (336)
T 3h4j_B 163 ---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF--------------KKVNSCV- 224 (336)
T ss_dssp ---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB--------------CCCCSSC-
T ss_pred ---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH--------------HHHHcCC-
Confidence 2234579999999999988776 68999999999999999999999764322110 0000000
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+..++.++.+++.+||+.||.+|||+.|++++
T Consensus 225 ------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 ------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp ------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 01122346678999999999999999999999876
No 64
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.2e-44 Score=336.43 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=213.2
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
.++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 357888999999999999999998899999999975432 3357889999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCccc
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 331 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 331 (470)
++++|.+++......+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++...... ....
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccc-cccc
Confidence 999999999887777899999999999999999999 899999999999999999999999999999865321 1112
Q ss_pred ccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCchh
Q 040392 332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED 410 (470)
Q Consensus 332 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+......
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~i~~~~~~--------------- 224 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFRL--------------- 224 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCCC---------------
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HHHHHhcCCcC---------------
Confidence 223456788999999988889999999999999999999 899987632221 11111110000
Q ss_pred hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 411 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
..+..++..+.+++.+||+.||++||++.|++++|+++.+
T Consensus 225 ---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 225 ---YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0012235678899999999999999999999999999975
No 65
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.4e-44 Score=354.55 Aligned_cols=273 Identities=15% Similarity=0.179 Sum_probs=210.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeCC------CcEEEEEEeecccchh-----------hhhHHHHHHHHhcCCCCcceeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGD------GMEVAVKVFNLQCGRA-----------LKGFDVECEMMKSIRHRNLIKV 234 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~nIv~~ 234 (470)
.++|++.+.||+|+||.||+|.+.+ ++.||||++....... ...+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4589999999999999999998754 4789999987543211 1123346667778899999999
Q ss_pred EeeeccC----CeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC--C
Q 040392 235 ISTCSNE----EFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD--D 308 (470)
Q Consensus 235 ~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~--~ 308 (470)
++++... ...++||||+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 9998664 5679999999 99999999887678999999999999999999999 89999999999999998 8
Q ss_pred CCCeEEeeeccccccCCCCCc-----ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcc
Q 040392 309 NMVAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEM 383 (470)
Q Consensus 309 ~~~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~ 383 (470)
++.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 999999999999876432211 111344599999999999999999999999999999999999999986433322
Q ss_pred hhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhh
Q 040392 384 TLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~ 458 (470)
. ..+.............+..+ ....++.++.+++..||..||++||++.++++.|+++.......
T Consensus 270 ~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~ 334 (364)
T 3op5_A 270 Y-VRDSKIRYRENIASLMDKCF---------PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK 334 (364)
T ss_dssp H-HHHHHHHHHHCHHHHHHHHS---------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred H-HHHHHHHhhhhHHHHHHHhc---------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 1 11111111111111111111 11344778999999999999999999999999999998765433
No 66
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8.5e-44 Score=339.76 Aligned_cols=269 Identities=22% Similarity=0.262 Sum_probs=206.0
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999865 68999999997543 2334677889999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
|+++ ++.+.+......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++...... .
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP--V 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC--C
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc--c
Confidence 9975 777777666677999999999999999999999 899999999999999999999999999999876422 2
Q ss_pred ccccccccCccccCccccCCCC-CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccc------cccc
Q 040392 330 MTQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTM------EVVG 402 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 402 (470)
.......+|+.|+|||++.+.. ++.++||||||+++|||++|..||....+....+............. ...+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2234457899999999987765 89999999999999999999888654333222222222211110000 0000
Q ss_pred cc---ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 403 AN---LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 403 ~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.. ..............++.++.+++.+||+.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00 0000000001112346778999999999999999999999875
No 67
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.4e-44 Score=346.72 Aligned_cols=261 Identities=25% Similarity=0.456 Sum_probs=197.1
Q ss_pred hhCCCCCCCeecccCceEEEEEEeCCC----cEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLGDG----MEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
..++|++.+.||+|+||.||+|+.... ..||||++... .....+.+.+|+++++.++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 356799999999999999999986543 27999998754 344567789999999999999999999999776554
Q ss_pred ------eEEEecCCCCChHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeE
Q 040392 245 ------ALVLEYMPHGSLEKYMYSSN-----YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAH 313 (470)
Q Consensus 245 ------~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~k 313 (470)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 89999999999999986432 25899999999999999999999 89999999999999999999999
Q ss_pred EeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhh
Q 040392 314 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDW 392 (470)
Q Consensus 314 l~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 392 (470)
|+|||++................+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+...
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~~~~~ 255 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YNYLIGG 255 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHHTT
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HHHHhcC
Confidence 999999987654443334445567889999999998899999999999999999999 9999986433221 1111110
Q ss_pred cCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 393 LPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
.. ...+..++.++.+++.+||+.||++|||+.++++.|+++...
T Consensus 256 ~~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 256 NR------------------LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp CC------------------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CC------------------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 00 001123467789999999999999999999999999998753
No 68
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.8e-44 Score=341.11 Aligned_cols=259 Identities=23% Similarity=0.380 Sum_probs=201.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeCC----CcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
.++|++.+.||+|+||.||+|.... +..||+|...... ....+.+.+|+.+++.++||||+++++++.+ +..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc-CccEE
Confidence 4678899999999999999997643 4579999986532 3345678899999999999999999999854 56789
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++|+|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999877777999999999999999999999 899999999999999999999999999999876432
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
. ........+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+......
T Consensus 170 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~~~~---------- 236 (281)
T 1mp8_A 170 T-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGERL---------- 236 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCC----------
T ss_pred c-ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcCCCC----------
Confidence 2 122233456789999999988889999999999999999997 999997643322 11111111000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
..+..++.++.+++.+||+.||++|||+.|++++|+++..+.
T Consensus 237 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 237 --------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 012345677899999999999999999999999999997543
No 69
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=343.36 Aligned_cols=274 Identities=20% Similarity=0.289 Sum_probs=210.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCC--eeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEE--FKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~--~~~lv 247 (470)
.++|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357899999999999999999865 58999999987543 334566788999999999999999999987654 77999
Q ss_pred EecCCCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----CCCCCeEEeeecccc
Q 040392 248 LEYMPHGSLEKYMYSSN--YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL----DDNMVAHLSDFSIAK 321 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill----~~~~~~kl~Dfg~a~ 321 (470)
|||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999997654 23899999999999999999999 8999999999999999 888899999999998
Q ss_pred ccCCCCCcccccccccCccccCccccC--------CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchh---hHHhh
Q 040392 322 LLTGEDQSMTQTQTLATIGYMAPEYGR--------EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTL---KHWVN 390 (470)
Q Consensus 322 ~~~~~~~~~~~~~~~~t~~y~aPE~~~--------~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~---~~~~~ 390 (470)
...... ......||+.|+|||++. +..++.++||||||+++|||++|+.||.......... .....
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 764332 223456899999999875 5678999999999999999999999997544332211 11111
Q ss_pred hhcCCccccccccc--cc---CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHH
Q 040392 391 DWLPISTMEVVGAN--LL---SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451 (470)
Q Consensus 391 ~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i 451 (470)
...+.......... .. .............+..+.+++.+||+.||++|||+.|++++..+-
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 11111110000000 00 000011112245577899999999999999999999999998865
No 70
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=6.6e-44 Score=344.19 Aligned_cols=270 Identities=23% Similarity=0.373 Sum_probs=218.1
Q ss_pred CHHHHHHhhCCCCCCCeecccCceEEEEEEe------CCCcEEEEEEeecccc-hhhhhHHHHHHHHhcC-CCCcceeEE
Q 040392 164 SHLELCRATDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRNLIKVI 235 (470)
Q Consensus 164 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~ 235 (470)
.........++|++.+.||+|+||.||+|++ .+++.||||++..... .....+.+|+++++.+ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3444555668899999999999999999974 3568899999975432 3456788999999999 699999999
Q ss_pred eeeccCC-eeeEEEecCCCCChHHhhhcCCCC---------------CCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCC
Q 040392 236 STCSNEE-FKALVLEYMPHGSLEKYMYSSNYI---------------LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDL 299 (470)
Q Consensus 236 ~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~---------------~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dl 299 (470)
+++...+ ..++||||+++|+|.+++...... +++..+..++.|++.||.||| +.+|+||||
T Consensus 98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~di 174 (316)
T 2xir_A 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 174 (316)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccC
Confidence 9987654 589999999999999999765432 789999999999999999999 899999999
Q ss_pred CCCCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCcc
Q 040392 300 KPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEI 378 (470)
Q Consensus 300 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~ 378 (470)
||+||+++.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 175 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 175 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 99999999999999999999987654444344445668899999999988899999999999999999998 99999764
Q ss_pred ccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 379 FNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
...+..... +....... .+..++.++.+++.+||+.||.+|||+.|++++|+++..+.
T Consensus 255 ~~~~~~~~~-~~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 255 KIDEEFCRR-LKEGTRMR------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp CCSHHHHHH-HHHTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred chhHHHHHH-hccCccCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 433221111 11111000 11223567899999999999999999999999999997543
No 71
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.6e-45 Score=368.75 Aligned_cols=260 Identities=25% Similarity=0.426 Sum_probs=213.6
Q ss_pred HHhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 169 CRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 169 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
....++|.+.+.||+|+||.||+|.+.++..||||+++... ...+.+.+|+++++.++||||+++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 33456788899999999999999999889999999997543 34677899999999999999999999987 55678999
Q ss_pred ecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 249 EYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 9999999999997543 35788999999999999999999 8999999999999999999999999999998764211
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
........++..|+|||.+....++.++||||||+++|||++ |+.||......+ ....+.....
T Consensus 339 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~------------ 403 (454)
T 1qcf_A 339 -YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRALERGYR------------ 403 (454)
T ss_dssp -HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHHHHTCC------------
T ss_pred -eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC------------
Confidence 111223446788999999988899999999999999999999 999997643321 1111111100
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
...+..++.++.+++.+||+.||++|||+.+|++.|+++..+
T Consensus 404 ------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 404 ------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred ------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 111234677899999999999999999999999999988643
No 72
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.1e-44 Score=344.93 Aligned_cols=252 Identities=21% Similarity=0.307 Sum_probs=206.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccch------hhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGR------ALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+....
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356889999999999999999865 6899999998754321 346688999999999999999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----CeEEeeeccc
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM----VAHLSDFSIA 320 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~----~~kl~Dfg~a 320 (470)
++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999999654 46899999999999999999999 89999999999999999887 8999999999
Q ss_pred cccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccc
Q 040392 321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV 400 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (470)
....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||......+ .+.........
T Consensus 166 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~------ 235 (326)
T 2y0a_A 166 HKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANVSAVNYE------ 235 (326)
T ss_dssp EECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHTCCC------
T ss_pred eECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHhcCCC------
Confidence 8764322 2234569999999999998899999999999999999999999997532211 11111000000
Q ss_pred ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
........++..+.+++.+||..||++|||+.|+++|
T Consensus 236 ----------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 ----------FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ----------CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ----------cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0011123446778999999999999999999999985
No 73
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.1e-43 Score=334.89 Aligned_cols=252 Identities=24% Similarity=0.383 Sum_probs=206.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccC--CeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNE--EFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~~lv 247 (470)
.++|.+.+.||+|+||.||+|++. ++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357889999999999999999985 8999999987543 34456788999999999999999999999876 788999
Q ss_pred EecCCCCChHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 248 LEYMPHGSLEKYMYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSAP--IIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
|||+++|+|.+++..... .+++..+..++.|++.||+||| +.+ ++||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999977553 5899999999999999999999 888 9999999999999999999999999876432
Q ss_pred CCCCcccccccccCccccCccccCCCCCCC---ccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccc
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYGREGRVST---NGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVV 401 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~---~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (470)
. ....+|+.|+|||.+.+..++. ++||||||+++|||++|+.||......+.... ........
T Consensus 165 ~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~------ 230 (271)
T 3kmu_A 165 S-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMK-VALEGLRP------ 230 (271)
T ss_dssp C-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHH-HHHSCCCC------
T ss_pred c-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHH-HHhcCCCC------
Confidence 2 2346899999999988765544 79999999999999999999976433221111 11110000
Q ss_pred cccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
..+..++.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 231 ------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 231 ------------TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 0112346778999999999999999999999999999863
No 74
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-44 Score=353.39 Aligned_cols=253 Identities=20% Similarity=0.286 Sum_probs=209.5
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|++.+.||+|+||.||+|... +|+.||+|++..........+.+|+++++.++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999764 6899999999766555566788999999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC--CCCeEEeeeccccccCCCCC
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD--NMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~ 328 (470)
+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999877667999999999999999999999 899999999999999974 5789999999998764322
Q ss_pred cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+......... .+..
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~-~~~~i~~~~~~------~~~~---- 272 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-TLQNVKRCDWE------FDED---- 272 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHCCCC------CCSS----
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCC------CCcc----
Confidence 2234579999999999999999999999999999999999999997632211 11111110000 0000
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
....++.++.+++.+||+.||++|||+.|++++
T Consensus 273 ------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 273 ------AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 012346678999999999999999999999986
No 75
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.7e-44 Score=337.02 Aligned_cols=251 Identities=27% Similarity=0.432 Sum_probs=195.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc----chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC----GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|.+. ++.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467888999999999999999985 8999999986542 23356788899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---eeecCCCCCCeeeCC--------CCCeEEee
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP---IIHCDLKPSNVLLDD--------NMVAHLSD 316 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~---i~H~dlkp~Nill~~--------~~~~kl~D 316 (470)
|||+++++|.+++.. ..+++..+..++.|++.||.||| +.+ ++||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999954 35899999999999999999999 777 999999999999986 77899999
Q ss_pred eccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc
Q 040392 317 FSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS 396 (470)
Q Consensus 317 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (470)
||++....... .....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||............ ......
T Consensus 160 fg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~~~-- 232 (271)
T 3dtc_A 160 FGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV-AMNKLA-- 232 (271)
T ss_dssp CCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH-HTSCCC--
T ss_pred CCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh-hcCCCC--
Confidence 99998654322 22456899999999998888999999999999999999999999764322111110 000000
Q ss_pred ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHH
Q 040392 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI 451 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i 451 (470)
...+..++.++.+++.+||+.||++|||+.|++++|+++
T Consensus 233 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 233 ----------------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ----------------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 001233467799999999999999999999999999864
No 76
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.1e-44 Score=347.25 Aligned_cols=267 Identities=22% Similarity=0.364 Sum_probs=216.5
Q ss_pred HHhhCCCCCCCeecccCceEEEEEEeCC------CcEEEEEEeeccc-chhhhhHHHHHHHHhcC-CCCcceeEEeeecc
Q 040392 169 CRATDGFSENNLIGRGGFGSVYKARLGD------GMEVAVKVFNLQC-GRALKGFDVECEMMKSI-RHRNLIKVISTCSN 240 (470)
Q Consensus 169 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~ 240 (470)
....++|.+.+.||+|+||.||+|.... +..||+|.+.... ....+.+.+|+++++.+ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3445789999999999999999998642 2479999987543 33456788999999999 89999999999999
Q ss_pred CCeeeEEEecCCCCChHHhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC
Q 040392 241 EEFKALVLEYMPHGSLEKYMYSS-------------NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD 307 (470)
Q Consensus 241 ~~~~~lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~ 307 (470)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEEC
Confidence 99999999999999999998653 235789999999999999999999 89999999999999999
Q ss_pred CCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhh
Q 040392 308 DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLK 386 (470)
Q Consensus 308 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~ 386 (470)
.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||++ |..||....... ...
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~ 277 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFY 277 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHH
Confidence 999999999999987654433333344567889999999988889999999999999999999 999987643322 122
Q ss_pred HHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhh
Q 040392 387 HWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLR 457 (470)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~ 457 (470)
..+....... .+..++.++.+++.+||+.||.+|||+.|++++|+++.....+
T Consensus 278 ~~~~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 330 (333)
T 2i1m_A 278 KLVKDGYQMA------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330 (333)
T ss_dssp HHHHHTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCC------------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence 2221111100 1122356789999999999999999999999999998765443
No 77
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=4.3e-44 Score=350.79 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=204.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-----chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-----GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 245 (470)
.++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356899999999999999999764 68999999986432 123567889999999999999999999999999999
Q ss_pred EEEecCCCCChHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEeeecc
Q 040392 246 LVLEYMPHGSLEKYMYSS---NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV---AHLSDFSI 319 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~---~kl~Dfg~ 319 (470)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998887543 245899999999999999999999 899999999999999987655 99999999
Q ss_pred ccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccc
Q 040392 320 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTME 399 (470)
Q Consensus 320 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (470)
+....... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ............
T Consensus 180 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~----- 250 (351)
T 3c0i_A 180 AIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGIIKGKYK----- 250 (351)
T ss_dssp CEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCCC-----
T ss_pred eeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCCC-----
Confidence 98764322 223345799999999999998999999999999999999999999976321 111111110000
Q ss_pred cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 400 VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
........++.++.+++.+||..||++|||+.|+++|
T Consensus 251 -----------~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 251 -----------MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp -----------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----------CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001112346778999999999999999999999875
No 78
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.1e-43 Score=343.71 Aligned_cols=262 Identities=27% Similarity=0.439 Sum_probs=214.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeC--------CCcEEEEEEeeccc-chhhhhHHHHHHHHhcC-CCCcceeEEeeeccC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQC-GRALKGFDVECEMMKSI-RHRNLIKVISTCSNE 241 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~ 241 (470)
.++|++.+.||+|+||.||+|++. ++..||+|++.... ......+.+|+++++.+ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 467899999999999999999863 46789999997543 34456788999999999 899999999999999
Q ss_pred CeeeEEEecCCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 040392 242 EFKALVLEYMPHGSLEKYMYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL 306 (470)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill 306 (470)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 99999999999999999997654 24789999999999999999999 8999999999999999
Q ss_pred CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchh
Q 040392 307 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTL 385 (470)
Q Consensus 307 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~ 385 (470)
+.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|||++ |+.||......+ +
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~ 268 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--L 268 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--H
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--H
Confidence 9999999999999987654433333344567889999999988889999999999999999999 999987643221 1
Q ss_pred hHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHh
Q 040392 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~ 456 (470)
...+...... ..+..++.++.+++.+||+.||.+||++.|++++|+++.....
T Consensus 269 ~~~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 269 FKLLKEGHRM------------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHHHTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCC------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 1111111100 0112346778999999999999999999999999999976543
No 79
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.5e-44 Score=346.27 Aligned_cols=281 Identities=26% Similarity=0.340 Sum_probs=202.2
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHH--HhcCCCCcceeEEeee-----ccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEM--MKSIRHRNLIKVISTC-----SNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~nIv~~~~~~-----~~~~~~ 244 (470)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++.+ ......
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46899999999999999999987 68999999997442 2333444444 4558999999999754 233467
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CeeecCCCCCCeeeCCCCCeEEe
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA---------PIIHCDLKPSNVLLDDNMVAHLS 315 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~---------~i~H~dlkp~Nill~~~~~~kl~ 315 (470)
++||||+++|+|.+++.... .++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999997655 488899999999999999999 77 99999999999999999999999
Q ss_pred eeccccccCCCCC------cccccccccCccccCccccCC-------CCCCCccchhhHHHHHHHHHhCCCCCCccccCc
Q 040392 316 DFSIAKLLTGEDQ------SMTQTQTLATIGYMAPEYGRE-------GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE 382 (470)
Q Consensus 316 Dfg~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~-------~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~ 382 (470)
|||++..+..... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987643221 122234569999999999876 456788999999999999999987765432221
Q ss_pred chhhHHhhhhcCCcccc-----cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhh
Q 040392 383 MTLKHWVNDWLPISTME-----VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLR 457 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~ 457 (470)
.....+..........+ ...................++.++.+++.+||+.||++|||+.|+++.|+++...+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 11111100000000000 0000000000011111233577899999999999999999999999999999887766
Q ss_pred hccC
Q 040392 458 NVGD 461 (470)
Q Consensus 458 ~~~~ 461 (470)
..+.
T Consensus 323 ~~~~ 326 (336)
T 3g2f_A 323 NKSV 326 (336)
T ss_dssp ----
T ss_pred cccC
Confidence 6543
No 80
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.8e-44 Score=349.43 Aligned_cols=250 Identities=24% Similarity=0.303 Sum_probs=200.9
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeee
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 245 (470)
..++|++.+.||+|+||.||+|+.. +|+.||+|++... .......+..|.++++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3578999999999999999999865 5899999999754 223455677899999988 6999999999999999999
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999997654 5899999999999999999999 89999999999999999999999999999985432
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+ ..........
T Consensus 177 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~------------ 241 (353)
T 3txo_A 177 N--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-LFEAILNDEV------------ 241 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC------------
T ss_pred C--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCC------------
Confidence 1 223345679999999999988889999999999999999999999997643221 1111111000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCH------HHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINA------REIVAK 447 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~el~~~ 447 (470)
..+..++.++.+++.+||+.||++||++ .|+++|
T Consensus 242 --------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 242 --------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred --------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 0012235668899999999999999998 777764
No 81
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.4e-44 Score=343.24 Aligned_cols=262 Identities=23% Similarity=0.414 Sum_probs=209.2
Q ss_pred CCCCCCCeecccCceEEEEEEe-----CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccC--Cee
Q 040392 173 DGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNE--EFK 244 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~--~~~ 244 (470)
+.|++.+.||+|+||.||+|++ .+++.||+|++.... ......+.+|+++++.++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588889999999999999983 368999999987543 33456788999999999999999999999776 668
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999777777999999999999999999999 9999999999999999999999999999998765
Q ss_pred CCCCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccC----------cchhhHHhhhhc
Q 040392 325 GEDQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNG----------EMTLKHWVNDWL 393 (470)
Q Consensus 325 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~----------~~~~~~~~~~~~ 393 (470)
..... .......+|..|+|||.+.+..++.++||||||+++|||++|+.|+...... ............
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK 257 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh
Confidence 43322 2233456888899999998888999999999999999999999986542110 000011100000
Q ss_pred CCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392 394 PISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR 452 (470)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~ 452 (470)
.. .....+..++.++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 258 ~~---------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 258 EG---------------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TT---------------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cc---------------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 00 001112345678999999999999999999999999999874
No 82
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.5e-43 Score=351.92 Aligned_cols=272 Identities=18% Similarity=0.253 Sum_probs=207.2
Q ss_pred hCCCCCCCeeccc--CceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 172 TDGFSENNLIGRG--GFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 172 ~~~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
.++|++.+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+....++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999865 69999999997553 3345677889999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 247 VLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999997652 56899999999999999999999 89999999999999999999999999999865432
Q ss_pred CCC-----cccccccccCccccCccccCC--CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcc-
Q 040392 326 EDQ-----SMTQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIST- 397 (470)
Q Consensus 326 ~~~-----~~~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~- 397 (470)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............+.. ..+...
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~ 259 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG-TVPCLLD 259 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-CCCcccc
Confidence 211 112223478999999999987 57999999999999999999999999865433322111110 000000
Q ss_pred ----------------------cc---cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 398 ----------------------ME---VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 398 ----------------------~~---~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.. ...+............+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 000000000001111234457789999999999999999999999976
No 83
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=337.68 Aligned_cols=255 Identities=27% Similarity=0.391 Sum_probs=201.0
Q ss_pred CCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecCC
Q 040392 173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP 252 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~~ 252 (470)
++|++.+.||+|+||.||+|++. ++.||+|.+... ...+.+.+|++++++++||||+++++++.+. .++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTT--TEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--cEEEEEcCC
Confidence 56888899999999999999884 789999998643 3456788999999999999999999998743 689999999
Q ss_pred CCChHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC-eEEeeeccccccCCCCCc
Q 040392 253 HGSLEKYMYSSNY--ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV-AHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 253 ~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~-~kl~Dfg~a~~~~~~~~~ 329 (470)
+|+|.+++..... .+++..++.++.|+++||+|||+...++|+||||||+||+++.++. +||+|||++......
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999976552 4788999999999999999999322289999999999999998886 799999999755321
Q ss_pred ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCch
Q 040392 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (470)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||....................
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------- 223 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP-------------- 223 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCC--------------
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCC--------------
Confidence 2234589999999999999999999999999999999999999976433322111111110000
Q ss_pred hhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 410 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
.....++..+.+++.+||+.||++|||+.|+++.|+++...+
T Consensus 224 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 224 ----PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp ----CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred ----CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 011234667899999999999999999999999999987544
No 84
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-44 Score=348.37 Aligned_cols=253 Identities=23% Similarity=0.374 Sum_probs=198.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCC--CcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRH--RNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+++++.++| +||+++++++......++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45689999999999999999998889999999987542 3345678899999999986 9999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
||+ .+++|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+|||++ ++.+||+|||++.......
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 994 5789999997654 6899999999999999999999 89999999999999997 6789999999998765443
Q ss_pred CcccccccccCccccCccccCC-----------CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc
Q 040392 328 QSMTQTQTLATIGYMAPEYGRE-----------GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS 396 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (470)
.........||+.|+|||++.+ ..++.++||||||+++|||++|+.||....+....+...........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 241 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccC
Confidence 3333445679999999998854 67889999999999999999999999764332222221111111000
Q ss_pred ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
.+...+.++.+++.+||+.||++|||+.|++++-
T Consensus 242 ------------------~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 242 ------------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp ------------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ------------------CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 0112245688999999999999999999998763
No 85
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.6e-44 Score=341.64 Aligned_cols=253 Identities=23% Similarity=0.360 Sum_probs=205.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeCC-C-------cEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGD-G-------MEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEF 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 243 (470)
.++|.+.+.||+|+||.||+|.... + ..||+|++........+.+.+|+++++.++||||+++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 4578889999999999999997542 3 5799999976666667788999999999999999999999999999
Q ss_pred eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC--------eEEe
Q 040392 244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV--------AHLS 315 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~--------~kl~ 315 (470)
.++||||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999877766999999999999999999999 999999999999999998887 9999
Q ss_pred eeccccccCCCCCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcC
Q 040392 316 DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394 (470)
Q Consensus 316 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (470)
|||++..... .....+|+.|+|||.+.+ ..++.++||||||+++|||++|..|+........... .......
T Consensus 164 Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~-~~~~~~~ 236 (289)
T 4fvq_A 164 DPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ-FYEDRHQ 236 (289)
T ss_dssp CCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-HHHTTCC
T ss_pred cCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHH-HhhccCC
Confidence 9999875422 123457889999999887 6789999999999999999996555443222211111 1111000
Q ss_pred CcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
. +...+.++.+++.+||+.||++|||+.|++++|+++..+
T Consensus 237 --~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 237 --L------------------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp --C------------------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred --C------------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 0 011134478999999999999999999999999998754
No 86
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=8.2e-44 Score=358.30 Aligned_cols=254 Identities=20% Similarity=0.290 Sum_probs=206.2
Q ss_pred hhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
..++|++.+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 456799999999999999999975 468999999987543 23456688999999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---CCCCeEEeeeccccccC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~a~~~~ 324 (470)
|||+++|+|.+.+.... .+++..+..++.|++.||.||| +.+|+||||||+||+++ .++.+||+|||++....
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999997654 5899999999999999999999 89999999999999998 56889999999998764
Q ss_pred CCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
... .......||+.|+|||++.+..++.++||||+||++|+|++|..||......+ ............. .
T Consensus 165 ~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~-----~-- 234 (444)
T 3soa_A 165 GEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR-LYQQIKAGAYDFP-----S-- 234 (444)
T ss_dssp TTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCCC-----T--
T ss_pred CCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhCCCCCC-----c--
Confidence 322 22234679999999999999899999999999999999999999997633221 1111111110000 0
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.....++.++.+++.+||+.||++|||+.|+++|
T Consensus 235 ---------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 235 ---------PEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0012346678999999999999999999999885
No 87
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=337.89 Aligned_cols=250 Identities=25% Similarity=0.331 Sum_probs=197.5
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccc--------------------------hhhhhHHHHHHHHh
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--------------------------RALKGFDVECEMMK 224 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 224 (470)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999999976 4689999999865421 12356889999999
Q ss_pred cCCCCcceeEEeeecc--CCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCC
Q 040392 225 SIRHRNLIKVISTCSN--EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPS 302 (470)
Q Consensus 225 ~l~h~nIv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~ 302 (470)
.++||||+++++++.+ ....++||||+++++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999876 5688999999999999887643 35899999999999999999999 899999999999
Q ss_pred CeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCC---CCCccchhhHHHHHHHHHhCCCCCCccc
Q 040392 303 NVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR---VSTNGDVYSFGIMLMETFTGKKPTNEIF 379 (470)
Q Consensus 303 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~---~~~~~DvwslGv~l~el~tg~~p~~~~~ 379 (470)
||+++.++.+||+|||++....... .......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999998764322 2233457999999999987765 4788999999999999999999997532
Q ss_pred cCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 380 NGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.. .....+... .. .. .....++.++.+++.+||+.||++||++.|+++|
T Consensus 245 ~~--~~~~~~~~~---~~-~~-------------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 IM--CLHSKIKSQ---AL-EF-------------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HH--HHHHHHHHC---CC-CC-------------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HH--HHHHHHhcc---cC-CC-------------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 11 111111100 00 00 0012336678999999999999999999999865
No 88
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.6e-43 Score=333.38 Aligned_cols=254 Identities=23% Similarity=0.330 Sum_probs=209.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 457889999999999999999865 68999999987543 3345678899999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
|+++++|.+++... ..+++..+..++.|++.||+||| +.+++|+||||+||+++.++.+||+|||.+.........
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999999654 46899999999999999999999 899999999999999999999999999999865433322
Q ss_pred ccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 330 MTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
.......+++.|+|||.+.+..+ +.++||||||+++|||++|+.||............|.......
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------- 228 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL------------- 228 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTS-------------
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccccc-------------
Confidence 23345678999999999987665 7789999999999999999999987554433333333211100
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.....++..+.+++.+||+.||++|||+.|++++
T Consensus 229 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 -----NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp -----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0012346678899999999999999999999875
No 89
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.2e-43 Score=348.79 Aligned_cols=252 Identities=21% Similarity=0.335 Sum_probs=206.1
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 567999999999999999999764 68999999997542 334567889999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---CeEEeeeccccccCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM---VAHLSDFSIAKLLTG 325 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~---~~kl~Dfg~a~~~~~ 325 (470)
||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||++.....
T Consensus 108 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999986544 6899999999999999999999 89999999999999998654 599999999987643
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
.. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .+...+...... ..
T Consensus 184 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~i~~~~~~----~~---- 250 (362)
T 2bdw_A 184 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAYD----YP---- 250 (362)
T ss_dssp CC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC----CC----
T ss_pred Cc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCC----CC----
Confidence 22 223467999999999999989999999999999999999999999763321 111111110000 00
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
......++.++.+++.+||+.||++||++.|++++
T Consensus 251 -------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 251 -------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00112346778999999999999999999999876
No 90
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=344.06 Aligned_cols=259 Identities=25% Similarity=0.401 Sum_probs=204.1
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcE----EEEEEeecc-cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGME----VAVKVFNLQ-CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 245 (470)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+... .....+.+.+|+.+++.++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467999999999999999999854 4544 577776433 3345677889999999999999999999998765 67
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+|+||+++|+|.+++......+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 899999999999999887778999999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
...........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+ +...+......
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~~--------- 238 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGERL--------- 238 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTTCCC---------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCCC---------
Confidence 444444445567889999999999999999999999999999999 999998643332 22221111100
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
..+..++.++.+++.+||+.||++||++.|+++.|+++...
T Consensus 239 ---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 239 ---------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp ---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 01223466789999999999999999999999999998743
No 91
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-43 Score=334.09 Aligned_cols=263 Identities=23% Similarity=0.391 Sum_probs=215.0
Q ss_pred CCCCCCC-eecccCceEEEEEEeC---CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 173 DGFSENN-LIGRGGFGSVYKARLG---DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 173 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
++|.+.+ .||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+++++.++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 4566666 8999999999999753 57889999997643 34567788999999999999999999999 45568999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++++|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999877777999999999999999999999 8999999999999999999999999999998764332
Q ss_pred Cc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 328 QS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 328 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
.. .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+......
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i~~~~~~---------- 232 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKRM---------- 232 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTTCCC----------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHhcCCcC----------
Confidence 22 22233456889999999988889999999999999999998 999997643321 12221111000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhhc
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNV 459 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~~ 459 (470)
..+..++.++.+++.+||+.||++||++.|++++|+++..+.....
T Consensus 233 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 233 --------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp --------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred --------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 0112446779999999999999999999999999999987766554
No 92
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-43 Score=338.96 Aligned_cols=246 Identities=26% Similarity=0.317 Sum_probs=205.2
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|..+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367899999999999999999865 69999999997542 23455677899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999997654 6899999999999999999999 999999999999999999999999999999865321
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
....+||+.|+|||++.+..++.++|+||||+++|||++|+.||......+ ...........
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~------------- 221 (318)
T 1fot_A 160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK-TYEKILNAELR------------- 221 (318)
T ss_dssp ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHCCCC-------------
T ss_pred ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCC-------------
Confidence 234579999999999999999999999999999999999999997632211 11111110000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCC-----CHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-----NAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~el~~~ 447 (470)
.+..++.++.+++.+||..||++|| ++.|+++|
T Consensus 222 -------~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 222 -------FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp -------CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred -------CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 0122356789999999999999999 89998865
No 93
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=9.4e-44 Score=352.15 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=202.7
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~l 246 (470)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+..|..++.++ +||||+++++++.+....++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999865 57899999997542 33455678899999887 89999999999999999999
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++|+|..++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999997654 6899999999999999999999 999999999999999999999999999999853222
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcch---hhHHh-hhhcCCccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT---LKHWV-NDWLPISTMEVVG 402 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~ 402 (470)
.......+||+.|+|||++.+..++.++|+|||||++|||++|+.||......+.. ...++ .......
T Consensus 207 --~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------ 278 (396)
T 4dc2_A 207 --GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------ 278 (396)
T ss_dssp --TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC------
T ss_pred --CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc------
Confidence 22334567999999999999999999999999999999999999999643221110 00110 0000000
Q ss_pred ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCH------HHHHHH
Q 040392 403 ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINA------REIVAK 447 (470)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~el~~~ 447 (470)
...+..++.++.+|+.+||+.||++||++ .|+++|
T Consensus 279 ----------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 279 ----------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred ----------cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 00122346678999999999999999996 566654
No 94
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.8e-43 Score=345.31 Aligned_cols=250 Identities=25% Similarity=0.332 Sum_probs=203.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 367899999999999999999765 58899999986542 23456778899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++..+...
T Consensus 94 ~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp ECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 9999999999999764 46899999999999999999999 999999999999999999999999999999876432
Q ss_pred CcccccccccCccccCccccCC---CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 328 QSMTQTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ............
T Consensus 169 --~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~~~~~-------- 236 (384)
T 4fr4_A 169 --TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTFETTV-------- 236 (384)
T ss_dssp --CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHHHHCC--------
T ss_pred --CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhhcc--------
Confidence 22345679999999999864 458999999999999999999999997533221 111111110000
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCC-HHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN-AREIVA 446 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~el~~ 446 (470)
...+..++.++.+++.+||+.||++||+ +.++++
T Consensus 237 --------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 --------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp --------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred --------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0011234677899999999999999998 666664
No 95
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.3e-42 Score=339.00 Aligned_cols=274 Identities=22% Similarity=0.349 Sum_probs=214.7
Q ss_pred HHHHHhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhc--CCCCcceeEEeeeccCC-
Q 040392 166 LELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKS--IRHRNLIKVISTCSNEE- 242 (470)
Q Consensus 166 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~~~~~~~~~~- 242 (470)
.......++|.+.+.||+|+||.||+|+. +|+.||||++... ....+..|.+++.. ++||||+++++++....
T Consensus 35 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 35 LVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred eecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 33445567899999999999999999988 5899999998643 34556778888887 78999999999998765
Q ss_pred ---eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeeCCCCCeEE
Q 040392 243 ---FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SAPIIHCDLKPSNVLLDDNMVAHL 314 (470)
Q Consensus 243 ---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~i~H~dlkp~Nill~~~~~~kl 314 (470)
..++||||+++|+|.+++... .+++..++.++.|++.||.|||... +.+|+||||||+||+++.++.+||
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL 188 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 188 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEE
T ss_pred ccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEE
Confidence 789999999999999999764 4899999999999999999999321 468999999999999999999999
Q ss_pred eeeccccccCCCCCcc--cccccccCccccCccccCCC------CCCCccchhhHHHHHHHHHhC----------CCCCC
Q 040392 315 SDFSIAKLLTGEDQSM--TQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLMETFTG----------KKPTN 376 (470)
Q Consensus 315 ~Dfg~a~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~DvwslGv~l~el~tg----------~~p~~ 376 (470)
+|||++.......... ......+|+.|+|||++.+. .++.++||||||+++|||++| ..||.
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~ 268 (342)
T 1b6c_B 189 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 268 (342)
T ss_dssp CCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred EECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcc
Confidence 9999998765433221 22345799999999998765 234789999999999999999 77887
Q ss_pred ccccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 377 EIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
...........+............. ........++..+.+++.+||+.||++|||+.|++++|+++..+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 269 DLVPSDPSVEEMRKVVCEQKLRPNI---------PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCC---------CGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccCcCcccHHHHHHHHHHHHhCCCC---------cccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 6544433333333322211111000 00112234577899999999999999999999999999999754
No 96
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=4e-43 Score=339.17 Aligned_cols=269 Identities=25% Similarity=0.326 Sum_probs=192.5
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 468999999999999999999764 68999999997543 2334667889999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 250 YMPHGSLEKYMYSSN-----YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
|++ |+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886532 35889999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc-C-Cccc---
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL-P-ISTM--- 398 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~-~~~~--- 398 (470)
... .......+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+ .+........ + ....
T Consensus 160 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGG
T ss_pred CCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhh
Confidence 221 122345689999999998764 68999999999999999999999997643321 1111111100 0 0000
Q ss_pred ---ccccccccC--c----hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 399 ---EVVGANLLS--Q----EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 399 ---~~~~~~~~~--~----~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
....+.... . .......+..++.++.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000000 0 000111122456789999999999999999999999875
No 97
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4.9e-44 Score=346.17 Aligned_cols=265 Identities=22% Similarity=0.386 Sum_probs=215.1
Q ss_pred HHHHHhhCCCCCCCeecccCceEEEEEEeC------CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeee
Q 040392 166 LELCRATDGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTC 238 (470)
Q Consensus 166 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~ 238 (470)
.+.....++|++.+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|+++++.++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344455678999999999999999999754 37889999987543 23455688999999999999999999999
Q ss_pred ccCCeeeEEEecCCCCChHHhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC
Q 040392 239 SNEEFKALVLEYMPHGSLEKYMYSSN---------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDN 309 (470)
Q Consensus 239 ~~~~~~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~ 309 (470)
.+....++||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCC
Confidence 99999999999999999999997532 35689999999999999999999 8999999999999999999
Q ss_pred CCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHH
Q 040392 310 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHW 388 (470)
Q Consensus 310 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~ 388 (470)
+.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~ 252 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--VLRF 252 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--HHHH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH--HHHH
Confidence 9999999999986643333333344567889999999988889999999999999999999 899987643221 1111
Q ss_pred hhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 389 VNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
+.. .... ..+..++..+.+++.+||+.||++|||+.|++++|+++..
T Consensus 253 ~~~---~~~~---------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 253 VME---GGLL---------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHT---TCCC---------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHc---CCcC---------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 110 0000 0112346778999999999999999999999999988754
No 98
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.2e-44 Score=347.58 Aligned_cols=275 Identities=24% Similarity=0.338 Sum_probs=214.0
Q ss_pred hCCCCCCCeecccCceEEEEEEe-----CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeec--cCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS--NEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~--~~~~~ 244 (470)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|+++++.++||||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35788999999999999999984 368899999998766666777899999999999999999999875 45678
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
++||||+++++|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 8999999999999999876667999999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcC-Cccccccc
Q 040392 325 GEDQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP-ISTMEVVG 402 (470)
Q Consensus 325 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 402 (470)
..... .......+|..|+|||.+.+..++.++||||||+++|+|++|+.||............+...... ....+...
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 33222 22334568888999999988889999999999999999999999987532211000000000000 00000000
Q ss_pred ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 403 ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
.. .....+..++.++.+++.+||+.||++|||+.|++++|+++....
T Consensus 259 ~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 259 EG------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp TT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cc------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 00 001112345778999999999999999999999999999986543
No 99
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=335.33 Aligned_cols=250 Identities=23% Similarity=0.384 Sum_probs=187.0
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46799999999999999999986 579999999996542 22346788899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++++|.+++......+++..+..++.|+++||.||| +.+++|+||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999877677999999999999999999999 8999999999999999999999999999998664222
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
.......+|+.|+|||.+.+..++.++||||||+++|||++|+.||......+. ... ... ...
T Consensus 167 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~----~~~--------~~~-- 229 (278)
T 3cok_A 167 --EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LNK----VVL--------ADY-- 229 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCS--------SCC--
T ss_pred --CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HHH----Hhh--------ccc--
Confidence 122335689999999999988899999999999999999999999976432211 000 000 000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 230 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 230 ------EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ------CCccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0112346678999999999999999999999875
No 100
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=344.51 Aligned_cols=273 Identities=26% Similarity=0.425 Sum_probs=215.7
Q ss_pred hCCCCCCCeecccCceEEEEEEe-----CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC--ee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-----GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE--FK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~--~~ 244 (470)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|+++++.++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688899999999999999984 368999999998766666778999999999999999999999986543 77
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
++||||+++++|.+++......+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 8999999999999999887777999999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC-----ccc
Q 040392 325 GEDQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI-----STM 398 (470)
Q Consensus 325 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-----~~~ 398 (470)
..... .......++..|+|||.+.+..++.++||||||+++|||++|..||...... ........... ...
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHH
Confidence 43221 1123345777899999998888999999999999999999999987642110 00000000000 000
Q ss_pred ccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHh
Q 040392 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~ 456 (470)
+.+... .....+..++.++.+++.+||+.||++|||+.|+++.|+++.+++.
T Consensus 274 ~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 274 ELLKNN------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHHHTT------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhcC------CCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 000000 0011123457789999999999999999999999999999988764
No 101
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.8e-43 Score=340.91 Aligned_cols=262 Identities=25% Similarity=0.430 Sum_probs=200.8
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC----CCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC--
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE-- 242 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-- 242 (470)
..++|.+.+.||+|+||.||+|+.. ++..||+|++... .....+.+.+|+++++.++||||+++++++.+..
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4567888899999999999999753 3458999998654 2344567889999999999999999999987654
Q ss_pred ---eeeEEEecCCCCChHHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEE
Q 040392 243 ---FKALVLEYMPHGSLEKYMYS-----SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHL 314 (470)
Q Consensus 243 ---~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl 314 (470)
..++||||+++|+|.+++.. ....+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+||
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 35899999999999999843 2356899999999999999999999 999999999999999999999999
Q ss_pred eeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhc
Q 040392 315 SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWL 393 (470)
Q Consensus 315 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 393 (470)
+|||++................+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+....
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~~ 266 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYDYLLHGH 266 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTC
T ss_pred eecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHHHHcCC
Confidence 99999987654433333344567889999999999899999999999999999999 888987643322 111111100
Q ss_pred CCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 394 PISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
.. ..+..++.++.+++.+||..||++||++.+++++|+++..++
T Consensus 267 ~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 267 RL------------------KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp CC------------------CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CC------------------CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 00 011234677999999999999999999999999999998654
No 102
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=6.9e-44 Score=364.77 Aligned_cols=256 Identities=26% Similarity=0.427 Sum_probs=213.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeCC-CcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|.+.+.||+|+||.||+|.+.. +..||||.+.... ...+.+.+|++++++++||||+++++++......++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 4568888999999999999998764 8899999997543 3456789999999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 251 MPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 251 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-Y 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-E
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-e
Confidence 99999999997643 56899999999999999999999 8999999999999999999999999999998764322 2
Q ss_pred ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
.......++..|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+.....
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~-------------- 437 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDYR-------------- 437 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTCC--------------
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--------------
Confidence 22233456789999999988889999999999999999999 999987643321 1121111110
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR 452 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~ 452 (470)
...+..++.++.+|+.+||+.||++|||+.++++.|+++.
T Consensus 438 ----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 438 ----MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 1112345778999999999999999999999999999874
No 103
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.4e-43 Score=336.50 Aligned_cols=262 Identities=26% Similarity=0.434 Sum_probs=207.2
Q ss_pred hCCCCCCCeecccCceEEEEEEeCC----CcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeee-ccCCeee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTC-SNEEFKA 245 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~-~~~~~~~ 245 (470)
..+|++.+.||+|+||.||+|+..+ +..+|+|.+.... ....+.+.+|+.++++++||||+++++++ ......+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4568888999999999999998543 2358999986533 34556788999999999999999999985 4556789
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999877777899999999999999999999 89999999999999999999999999999986643
Q ss_pred CCC--cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccc
Q 040392 326 EDQ--SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVG 402 (470)
Q Consensus 326 ~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (470)
... ........+|+.|+|||.+.+..++.++||||||+++|||++ |..||......+ ...........
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~------- 251 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGRRL------- 251 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHHHHHTTCCC-------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhcCCCC-------
Confidence 221 122334567889999999988899999999999999999999 555555432221 11111110000
Q ss_pred ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHh
Q 040392 403 ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456 (470)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~ 456 (470)
..+..++..+.+++.+||+.||++|||+.|+++.|+++...+.
T Consensus 252 -----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 252 -----------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp -----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred -----------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0112346678999999999999999999999999999976543
No 104
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1e-43 Score=343.53 Aligned_cols=273 Identities=23% Similarity=0.382 Sum_probs=212.0
Q ss_pred CCCCCeecccCceEEEEEEeC-----CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeecc--CCeeeE
Q 040392 175 FSENNLIGRGGFGSVYKARLG-----DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSN--EEFKAL 246 (470)
Q Consensus 175 ~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~~l 246 (470)
|++.+.||+|+||.||++.+. +++.||||++.... ......+.+|+++++.++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 388899999999999988642 68899999997553 3446678899999999999999999999976 467899
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++|+|.+++.... +++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997654 899999999999999999999 899999999999999999999999999999877543
Q ss_pred CCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcC-Cccccccccc
Q 040392 327 DQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP-ISTMEVVGAN 404 (470)
Q Consensus 327 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 404 (470)
... .......+|..|+|||.+.+..++.++||||||+++|||++|+.||............+...... ....+.....
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 222 22334567888999999998889999999999999999999999987532211100000000000 0000000000
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhh
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~ 458 (470)
.....+..++.++.+++.+||+.||++|||+.|+++.|+++.+++...
T Consensus 268 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 268 ------ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ------cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 001112345778999999999999999999999999999998877643
No 105
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=349.96 Aligned_cols=247 Identities=22% Similarity=0.331 Sum_probs=200.4
Q ss_pred CCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecCCCCCh
Q 040392 178 NNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGSL 256 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~L 256 (470)
.+.||+|+||.||+|.. .+|+.||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 56799999999999976 46899999999876555667889999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee--CCCCCeEEeeeccccccCCCCCcccccc
Q 040392 257 EKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL--DDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334 (470)
Q Consensus 257 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 334 (470)
.+++......+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||++..+.... ....
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~~~ 247 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKV 247 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BCCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---cccc
Confidence 9999777667899999999999999999999 8999999999999999 677899999999998764332 2233
Q ss_pred cccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhhhhH
Q 040392 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFV 414 (470)
Q Consensus 335 ~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (470)
..||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+........... ..
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~i~~~~~~~~----------------~~ 310 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TLNNILACRWDLE----------------DE 310 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCCSC----------------SG
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCCCC----------------hh
Confidence 569999999999998899999999999999999999999997643221 1122111110000 00
Q ss_pred hhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 415 AKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 415 ~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
....++.++.+|+.+||+.||++||++.|++++
T Consensus 311 ~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 311 EFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 112346778999999999999999999999984
No 106
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.2e-43 Score=350.40 Aligned_cols=251 Identities=23% Similarity=0.377 Sum_probs=198.8
Q ss_pred CCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCC--CCcceeEEeeeccCCeeeEEE
Q 040392 173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIR--HRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~~~~~lv~ 248 (470)
++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+++++.++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4599999999999999999998889999999987542 345577889999999997 599999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
| +.+++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56789999997655 6889999999999999999999 99999999999999995 58999999999987654333
Q ss_pred cccccccccCccccCccccCC-----------CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcc
Q 040392 329 SMTQTQTLATIGYMAPEYGRE-----------GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIST 397 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (470)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+....+...+.......
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~- 288 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE- 288 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC-
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC-
Confidence 333445679999999998864 36889999999999999999999999764332111111111110000
Q ss_pred cccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 398 MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.+...+.++.+++.+||+.||++||++.|++++
T Consensus 289 -----------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 289 -----------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp -----------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----------------CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 011124568899999999999999999999876
No 107
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3.3e-43 Score=333.76 Aligned_cols=259 Identities=24% Similarity=0.402 Sum_probs=208.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeCC----CcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
.++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... ....+.+.+|+++++.++||||+++++++.+. ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4678899999999999999997532 3469999987552 34567788999999999999999999998754 4589
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++++|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999877777999999999999999999999 999999999999999999999999999999866432
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
. ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+......
T Consensus 167 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~~~~~~~---------- 233 (281)
T 3cc6_A 167 D-YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVLEKGDRL---------- 233 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHHHHTCCC----------
T ss_pred c-ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHHhcCCCC----------
Confidence 2 122234457889999999988889999999999999999998 999997543322 11111111000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
..+..++..+.+++.+||+.||++||++.|++++|+++....
T Consensus 234 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 234 --------PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 011234667899999999999999999999999999987543
No 108
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-44 Score=351.81 Aligned_cols=261 Identities=26% Similarity=0.438 Sum_probs=200.5
Q ss_pred CCCCCCeecccCceEEEEEEeC--CC--cEEEEEEeecc-cchhhhhHHHHHHHHhcCCCCcceeEEeeec-cCCeeeEE
Q 040392 174 GFSENNLIGRGGFGSVYKARLG--DG--MEVAVKVFNLQ-CGRALKGFDVECEMMKSIRHRNLIKVISTCS-NEEFKALV 247 (470)
Q Consensus 174 ~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~-~~~~~~lv 247 (470)
.|.+.+.||+|+||.||+|++. ++ ..||+|.+... .....+.+.+|+.++++++||||+++++++. ..+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566789999999999999753 22 46899998643 3345677889999999999999999999865 45678899
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999877777899999999999999999999 8999999999999999999999999999998664322
Q ss_pred Cc--ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 328 QS--MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 328 ~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
.. .......+|+.|+|||.+.+..++.++||||||+++|||++ |..||......+. ...+.....
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--~~~~~~~~~---------- 314 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TVYLLQGRR---------- 314 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--HHHHHTTCC----------
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--HHHHHcCCC----------
Confidence 21 12234457889999999998899999999999999999999 6777765433221 111111100
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhh
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLR 457 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~ 457 (470)
...+..++..+.+++.+||+.||++||++.|+++.|+++..++..
T Consensus 315 --------~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 315 --------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 011234567799999999999999999999999999999866543
No 109
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=343.70 Aligned_cols=252 Identities=22% Similarity=0.304 Sum_probs=192.0
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++......++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3567999999999999999999875 58899999987543 34567789999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeeeccccccCCC
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~---~~~~kl~Dfg~a~~~~~~ 326 (470)
|+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||++......
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999996544 5899999999999999999999 899999999999999975 889999999999865322
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||......+............. ..
T Consensus 205 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~-----~~---- 272 (349)
T 2w4o_A 205 ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYF-----IS---- 272 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCC-----CT----
T ss_pred ---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCcc-----CC----
Confidence 122345689999999999998999999999999999999999999976433222222211111000 00
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.....++.++.+++.+||+.||++|||+.|++++
T Consensus 273 -------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 273 -------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp -------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0012346678999999999999999999999875
No 110
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.7e-43 Score=343.58 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=198.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCC-------
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEE------- 242 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------- 242 (470)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457889999999999999999875 79999999997543 335577889999999999999999999875432
Q ss_pred --------------------------------------------------eeeEEEecCCCCChHHhhhcCC--CCCCHH
Q 040392 243 --------------------------------------------------FKALVLEYMPHGSLEKYMYSSN--YILDIF 270 (470)
Q Consensus 243 --------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~--~~~~~~ 270 (470)
..++||||+++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 3789999999999999997654 345666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc----------ccccccccCcc
Q 040392 271 QRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS----------MTQTQTLATIG 340 (470)
Q Consensus 271 ~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~~t~~ 340 (470)
.++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......... .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 899999999999999999999999999999876543211 12234579999
Q ss_pred ccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhH
Q 040392 341 YMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCV 420 (470)
Q Consensus 341 y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (470)
|+|||.+.+..++.++||||||+++|||++|..|+.... .......... . .......+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-------~~~~~~~~~~---------~------~~~~~~~~ 299 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-------RIITDVRNLK---------F------PLLFTQKY 299 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-------HHHHHHHTTC---------C------CHHHHHHC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-------HHHHHhhccC---------C------CcccccCC
Confidence 999999999999999999999999999999877643210 0000000000 0 01112335
Q ss_pred HHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 421 SCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 421 ~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.++.+++.+||+.||++|||+.|++++
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 567899999999999999999999875
No 111
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=6.3e-44 Score=355.25 Aligned_cols=258 Identities=23% Similarity=0.279 Sum_probs=208.4
Q ss_pred HHHHhhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC
Q 040392 167 ELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE 242 (470)
Q Consensus 167 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~ 242 (470)
++....++|++.+.||+|+||.||+|+.. +++.||+|++... .......+.+|+.+++.++||||+++++++.+..
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445678999999999999999999865 5889999998653 1233456888999999999999999999999999
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++||||+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 999999999999999999764 4889999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCcccccccccCccccCccccCCCC----CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccc
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGREGR----VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTM 398 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~----~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 398 (470)
..... .......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||......+ ............
T Consensus 218 ~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~--- 292 (410)
T 3v8s_A 218 MNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMNHKNSL--- 292 (410)
T ss_dssp CCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHHHHC---
T ss_pred eccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh-HHHHHHhccccc---
Confidence 64322 22233567999999999987655 7899999999999999999999997532211 111111100000
Q ss_pred ccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccC--CCCHHHHHHH
Q 040392 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQ--RINAREIVAK 447 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~el~~~ 447 (470)
..+....++.++.+|+.+||+.+|.+ ||++.||++|
T Consensus 293 -------------~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 -------------TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp -------------CCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred -------------cCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 00011134677899999999999998 9999999986
No 112
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.2e-43 Score=344.94 Aligned_cols=253 Identities=23% Similarity=0.268 Sum_probs=196.1
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.+++.++||||+++++++......++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 568999999999999999999865 78999999997543 2345678899999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC--eEEeeeccccccCCCCC
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV--AHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~--~kl~Dfg~a~~~~~~~~ 328 (470)
+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~--- 170 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL--- 170 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc---
Confidence 99999999996544 5899999999999999999999 999999999999999987765 99999999874322
Q ss_pred cccccccccCccccCccccCCCCCCCc-cchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRVSTN-GDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~-~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
........||+.|+|||++.+..++.+ +||||||+++|+|++|+.||........ ..............
T Consensus 171 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~~~--------- 240 (361)
T 3uc3_A 171 HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVKYS--------- 240 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTCCC---------
T ss_pred cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCCCC---------
Confidence 122234579999999999988777655 8999999999999999999986543322 22222211111100
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
......++.++.+|+.+||+.||++|||+.|+++|
T Consensus 241 -----~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 241 -----IPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -----CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -----CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00011235678899999999999999999999987
No 113
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-43 Score=334.73 Aligned_cols=261 Identities=24% Similarity=0.397 Sum_probs=208.6
Q ss_pred CCCCCCeecccCceEEEEEEeC-C---CcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee-eEE
Q 040392 174 GFSENNLIGRGGFGSVYKARLG-D---GMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK-ALV 247 (470)
Q Consensus 174 ~~~~~~~ig~G~~g~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~-~lv 247 (470)
.|...+.||+|+||.||+|.+. + +..||+|.+.... ....+.+.+|+++++.++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999743 2 2379999986543 34557788999999999999999999999766554 899
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+.+|+|.+++......+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999887777899999999999999999999 8999999999999999999999999999998654322
Q ss_pred C--cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 328 Q--SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 328 ~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
. ........+++.|+|||.+.+..++.++||||||+++|+|++|..|+....+.. .....+......
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~---------- 247 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLTHFLAQGRRL---------- 247 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHHHHHHTTCCC----------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHHHHhhcCCCC----------
Confidence 1 122234567889999999999999999999999999999999666654322221 222222111110
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHh
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~ 456 (470)
..+..++..+.+++.+||+.||.+|||+.|+++.|+++..++.
T Consensus 248 --------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 248 --------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp --------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred --------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 0112346678999999999999999999999999999987654
No 114
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=6.4e-44 Score=361.19 Aligned_cols=258 Identities=27% Similarity=0.448 Sum_probs=207.1
Q ss_pred hhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
..++|++.+.||+|+||.||+|.+.++..||||++.... ...+.+.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 356788889999999999999999888899999997543 234678899999999999999999999876 667899999
Q ss_pred CCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 251 MPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 251 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-e
Confidence 99999999997532 45899999999999999999999 8999999999999999999999999999998764322 1
Q ss_pred ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+....
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~~--------------- 398 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGY--------------- 398 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTC---------------
T ss_pred ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC---------------
Confidence 22233456789999999988899999999999999999999 999997643321 111111100
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
+...+..++..+.+++.+||+.||++|||+.++++.|+++..+
T Consensus 399 ---~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 399 ---RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred ---CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 0111234577899999999999999999999999999988643
No 115
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.2e-43 Score=339.74 Aligned_cols=261 Identities=22% Similarity=0.290 Sum_probs=208.3
Q ss_pred hhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeec----cCCeee
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS----NEEFKA 245 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~----~~~~~~ 245 (470)
..++|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|+++++.++||||+++++++. .....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346799999999999999999986 579999999987666666778899999999999999999999986 345778
Q ss_pred EEEecCCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 246 LVLEYMPHGSLEKYMYS---SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
+||||+++|+|.+++.. ....+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999999876 3467899999999999999999999 89999999999999999999999999999875
Q ss_pred cCCCCCc-------ccccccccCccccCccccCCCC---CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh
Q 040392 323 LTGEDQS-------MTQTQTLATIGYMAPEYGREGR---VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW 392 (470)
Q Consensus 323 ~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~---~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 392 (470)
....... .......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||.................
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 263 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence 4321111 0112345799999999987654 68999999999999999999999975332222222111110
Q ss_pred cCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392 393 LPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR 452 (470)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~ 452 (470)
.. ......++.++.+++.+||+.||.+||++.|++++|+++.
T Consensus 264 ~~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 264 LS------------------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp --------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred CC------------------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 00 0011234667899999999999999999999999999886
No 116
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=9.2e-44 Score=346.76 Aligned_cols=250 Identities=25% Similarity=0.333 Sum_probs=204.2
Q ss_pred HhhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCee
Q 040392 170 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 170 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~ 244 (470)
...++|.+.+.||+|+||.||+|+.+ +|+.||+|+++... ......+..|..++..+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34678999999999999999999865 68999999997542 23445677899999876 899999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 99999999999999997644 5899999999999999999999 8999999999999999999999999999998543
Q ss_pred CCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
... ......+||+.|+|||++.+..++.++|+|||||++|||++|+.||......+ +...+....+
T Consensus 170 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~i~~~~~---------- 235 (345)
T 1xjd_A 170 LGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFHSIRMDNP---------- 235 (345)
T ss_dssp CTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCC----------
T ss_pred cCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHhCCC----------
Confidence 221 22345679999999999999999999999999999999999999997633211 1111111000
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHH-HHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAR-EIVA 446 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-el~~ 446 (470)
..+..++.++.+++.+||..||++||++. |+++
T Consensus 236 ---------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 236 ---------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp ---------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred ---------CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 00122366789999999999999999997 6654
No 117
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.4e-43 Score=342.12 Aligned_cols=249 Identities=23% Similarity=0.320 Sum_probs=196.1
Q ss_pred hCCCCCCCeecccCceEEEEEEe----CCCcEEEEEEeeccc----chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL----GDGMEVAVKVFNLQC----GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEF 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~ 243 (470)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+..|+++++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 478999999987542 2344567789999999999999999999999999
Q ss_pred eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
.++||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999997654 5889999999999999999999 899999999999999999999999999998754
Q ss_pred CCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392 324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403 (470)
Q Consensus 324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (470)
.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ..........
T Consensus 172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~---------- 238 (327)
T 3a62_A 172 IHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TIDKILKCKL---------- 238 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCC----------
T ss_pred ccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCC----------
Confidence 3221 12234578999999999999899999999999999999999999997643221 1111111000
Q ss_pred cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCC-----CHHHHHHH
Q 040392 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-----NAREIVAK 447 (470)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~el~~~ 447 (470)
..+..++.++.+++.+||..||++|| ++.|+++|
T Consensus 239 ----------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 239 ----------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ----------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ----------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 00123366789999999999999999 78888775
No 118
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.2e-43 Score=336.45 Aligned_cols=258 Identities=25% Similarity=0.429 Sum_probs=211.2
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
.++|++.+.||+|+||.||+|...++..||+|.+.... ...+.+.+|+++++.++||||+++++++.. +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 46788899999999999999998888899999987543 345678899999999999999999999874 4578999999
Q ss_pred CCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392 252 PHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 330 (470)
Q Consensus 252 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 330 (470)
++++|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++....... ..
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YT 165 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EE
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-cc
Confidence 9999999996543 25899999999999999999999 9999999999999999999999999999998764322 12
Q ss_pred cccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCch
Q 040392 331 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409 (470)
Q Consensus 331 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (470)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.....
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~~~--------------- 228 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNLERGYR--------------- 228 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCC---------------
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHHHhcccC---------------
Confidence 2233456788999999988889999999999999999999 999987643221 1111111000
Q ss_pred hhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 410 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
...+..++.++.+++.+||+.||++|||+.++++.|+++..+.
T Consensus 229 ---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 229 ---MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ---CCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 0011234677899999999999999999999999999987654
No 119
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.5e-43 Score=344.68 Aligned_cols=246 Identities=20% Similarity=0.246 Sum_probs=205.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 357899999999999999999865 68999999987542 23456678899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 99999999999997654 5899999999999999999999 999999999999999999999999999999876432
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
....+||+.|+|||++.+..++.++||||||+++|||++|+.||......+ ..........
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~-------------- 255 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ-IYEKIVSGKV-------------- 255 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC--------------
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH-HHHHHHcCCC--------------
Confidence 234579999999999999999999999999999999999999997632211 1111111100
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCC-----HHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN-----AREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~el~~~ 447 (470)
..+..++.++.+++.+||+.||++||+ +.|+++|
T Consensus 256 ------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 256 ------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 011234667899999999999999998 8888775
No 120
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-43 Score=342.60 Aligned_cols=259 Identities=27% Similarity=0.479 Sum_probs=205.2
Q ss_pred CCCCCCCeecccCceEEEEEEeCC-----CcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 173 DGFSENNLIGRGGFGSVYKARLGD-----GMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
++|...+.||+|+||.||+|.... +..||+|.+.... ......+.+|+++++.++||||+++++++......++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 467778999999999999997542 3469999987543 3345578899999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++|+|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999877778999999999999999999999 899999999999999999999999999999876432
Q ss_pred CC-cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 327 DQ-SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 327 ~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
.. ........+|..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.....
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~~~~~~---------- 268 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKAINDGFR---------- 268 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTTCC----------
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHCCCc----------
Confidence 21 112223446788999999988899999999999999999999 999997643221 1111111000
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
...+..++.++.+++.+||+.||++||++.|++++|+++...
T Consensus 269 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 310 (333)
T 1mqb_A 269 --------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310 (333)
T ss_dssp --------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred --------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 001123467789999999999999999999999999998754
No 121
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.5e-42 Score=334.03 Aligned_cols=262 Identities=23% Similarity=0.338 Sum_probs=202.0
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc---cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|.. .+|+.||+|++... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45799999999999999999975 57999999998743 234456788899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 248 LEYMPHGSLEKYMYS---SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
|||+++++|.+++.. ....+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999864 3456899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
... .......+++.|+|||.+.+..++.++||||||+++|+|++|+.||.............+... ....
T Consensus 188 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~----- 257 (310)
T 2wqm_A 188 SKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC---DYPP----- 257 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTT---CSCC-----
T ss_pred CCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcc---cCCC-----
Confidence 322 122345689999999999998999999999999999999999999875432221221111110 0000
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
. ....++.++.+++.+||+.||++|||+.++++.|+++...-
T Consensus 258 ~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 258 L---------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp C---------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred C---------cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 0 01234667899999999999999999999999999998654
No 122
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.4e-43 Score=338.36 Aligned_cols=270 Identities=21% Similarity=0.251 Sum_probs=202.2
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999865 68899999986542 2234678889999999999999999999999999999
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++++|.+++.... .+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 999999999999997654 5899999999999999999999 899999999999999999999999999998765432
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
. ........+++.|+|||.+.+..++.++||||||+++|||++|+.||...... .+...+....+.
T Consensus 188 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~----------- 253 (309)
T 2h34_A 188 K-LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR----------- 253 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC-----------
T ss_pred c-cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC-----------
Confidence 2 12223456899999999999999999999999999999999999999763221 111111111000
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCC-CHHHHHHHHHHHHHHHhhhccCch
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-NAREIVAKLLKIRDSLLRNVGDRC 463 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~el~~~L~~i~~~~~~~~~~~~ 463 (470)
....+..++.++.+++.+||+.||++|| ++.++++.|+++..........+.
T Consensus 254 -----~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~~~~~ 306 (309)
T 2h34_A 254 -----PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDRATDI 306 (309)
T ss_dssp -----GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC----------
T ss_pred -----ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccchhhh
Confidence 0011233466789999999999999999 999999999998655544444333
No 123
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-43 Score=339.41 Aligned_cols=245 Identities=22% Similarity=0.219 Sum_probs=195.6
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEEE
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
++|++.+.||+|+||+||+|+.. +|+.||||++.... .........|+..+..+ +||||+++++++.+....++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999876 79999999986432 22333444455555544 8999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
||+ +++|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 999 66999999887778999999999999999999999 899999999999999999999999999998865432
Q ss_pred cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
.......||+.|+|||++.+ .++.++||||||+++|||++|..|+.... ..........
T Consensus 211 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~~~~~--------------- 269 (311)
T 3p1a_A 211 -GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQQLRQGYL--------------- 269 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHHHHTTTCC---------------
T ss_pred -CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHhccCC---------------
Confidence 22334568999999998876 79999999999999999999977654321 1111111000
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
....+..++.++.+++.+||+.||++|||+.|++++
T Consensus 270 ---~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 270 ---PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ---CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 011223457789999999999999999999999874
No 124
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.2e-42 Score=332.11 Aligned_cols=266 Identities=19% Similarity=0.225 Sum_probs=210.4
Q ss_pred hhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeee-ccCCeeeEEE
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTC-SNEEFKALVL 248 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~-~~~~~~~lv~ 248 (470)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ....+..|+++++.++|++++..+.++ ......++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999985 578999999875432 335688899999999988877766655 6677889999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeeeccccccCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~a~~~~~ 325 (470)
||+ +++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 89999999876677999999999999999999999 9999999999999999 7899999999999987654
Q ss_pred CCCc-----ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcc--hhhHHhhhhcCCccc
Q 040392 326 EDQS-----MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEM--TLKHWVNDWLPISTM 398 (470)
Q Consensus 326 ~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~ 398 (470)
.... .......+|+.|+|||.+.+..++.++||||||+++|||++|+.||........ .+........+..
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch--
Confidence 3221 122356789999999999999999999999999999999999999986543221 1111111100000
Q ss_pred ccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhh
Q 040392 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLR 457 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~ 457 (470)
.......++.++.+++..||+.||++||++.++++.|+++..+...
T Consensus 239 -------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 239 -------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp -------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred -------------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 0011133467899999999999999999999999999999876553
No 125
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=341.24 Aligned_cols=267 Identities=22% Similarity=0.295 Sum_probs=199.8
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccc-hhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
++|.+.+.||+|+||.||+|+.. +++.||+|++..... .....+.+|+++++.++||||+++++++......++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999865 689999999865432 2223455699999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 330 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 330 (470)
++ |+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++...... ..
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--TK 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC--cc
Confidence 97 5999999887778999999999999999999999 999999999999999999999999999999765322 22
Q ss_pred cccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC--
Q 040392 331 TQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS-- 407 (470)
Q Consensus 331 ~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 407 (470)
......+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||......+ ....... ................
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~-~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFR-ILGTPTEETWPGILSNEE 233 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH-HHCCCCTTTSTTGGGCHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-HhCCCChHhchhhhcchh
Confidence 2234568999999998876 568999999999999999999999997643221 1111111 1110000000000000
Q ss_pred ---------chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 ---------QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ---------~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...........++.++.+|+.+||+.||++|||+.|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000111223456778999999999999999999999874
No 126
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-43 Score=349.88 Aligned_cols=260 Identities=22% Similarity=0.292 Sum_probs=208.9
Q ss_pred HHHHhhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC
Q 040392 167 ELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE 242 (470)
Q Consensus 167 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~ 242 (470)
+.....++|++.+.||+|+||.||+|+.. +|+.||+|++... .......+..|..++..++||||+++++++.+.+
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 33445688999999999999999999864 6999999999753 2234566889999999999999999999999999
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++||||+++|+|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+|||++.++++||+|||+++.
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 999999999999999999876667899999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCcccccccccCccccCccccC-------CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGR-------EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI 395 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~-------~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (470)
..... .......+||+.|+|||++. ...++.++|+|||||++|||++|+.||......+. ....+......
T Consensus 212 ~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~i~~~~~~~ 289 (412)
T 2vd5_A 212 LRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET-YGKIVHYKEHL 289 (412)
T ss_dssp CCTTS-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHHC
T ss_pred ccCCC-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH-HHHHHhcccCc
Confidence 64322 22223467999999999886 45689999999999999999999999976432211 11111100000
Q ss_pred cccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCC---CCHHHHHHH
Q 040392 396 STMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQR---INAREIVAK 447 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---ps~~el~~~ 447 (470)
.. + ..+..++.++.+++.+||. +|++| |++.|+++|
T Consensus 290 ~~-----p----------~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 290 SL-----P----------LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp CC-----C--------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CC-----C----------ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 00 0 0012346778999999999 99998 589998875
No 127
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9e-44 Score=342.77 Aligned_cols=259 Identities=24% Similarity=0.379 Sum_probs=198.0
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCC----e
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEE----F 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~----~ 243 (470)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+++++.++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999985 578999999997542 233457888999999999999999999986554 3
Q ss_pred eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
.++||||+++++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 489999999999999997654 6899999999999999999999 899999999999999999999999999999866
Q ss_pred CCCCCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccc
Q 040392 324 TGEDQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVG 402 (470)
Q Consensus 324 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (470)
...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+... ......
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~~~~---------- 235 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY-QHVRED---------- 235 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHCC----------
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhcCC----------
Confidence 433222 22234568999999999999999999999999999999999999997643221111 111100
Q ss_pred ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHH-HHHHHH
Q 040392 403 ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIV-AKLLKI 451 (470)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~-~~L~~i 451 (470)
..........++.++.+++.+||+.||++||++.+++ ..|.++
T Consensus 236 ------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 236 ------PIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ------CCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ------CCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0000111234577899999999999999999666555 445444
No 128
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=9.8e-44 Score=347.56 Aligned_cols=266 Identities=17% Similarity=0.201 Sum_probs=203.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeC----CCcEEEEEEeecccch-----------hhhhHHHHHHHHhcCCCCcceeEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG----DGMEVAVKVFNLQCGR-----------ALKGFDVECEMMKSIRHRNLIKVIS 236 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~nIv~~~~ 236 (470)
.++|.+.+.||+|+||.||+|... ++..+|+|+....... ....+..|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467999999999999999999875 5788999998754321 1223567888999999999999999
Q ss_pred eecc----CCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC--
Q 040392 237 TCSN----EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM-- 310 (470)
Q Consensus 237 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~-- 310 (470)
++.. ....++||||+ +++|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9877 67889999999 999999997655 7899999999999999999999 89999999999999998887
Q ss_pred CeEEeeeccccccCCCCC-----cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchh
Q 040392 311 VAHLSDFSIAKLLTGEDQ-----SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTL 385 (470)
Q Consensus 311 ~~kl~Dfg~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~ 385 (470)
.+||+|||+++.+..... ........||+.|+|||++.+..++.++||||||+++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 999999999987643211 112244579999999999999899999999999999999999999997543332222
Q ss_pred hHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392 386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR 452 (470)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~ 452 (470)
.......... . ............++.++.+++.+||+.||++||++.++++.|+++.
T Consensus 271 ~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 271 QTAKTNLLDE-L---------PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHT-T---------THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHhhccc-c---------cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 2211111100 0 0000000011145778999999999999999999999999999875
No 129
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.1e-43 Score=340.15 Aligned_cols=254 Identities=22% Similarity=0.282 Sum_probs=203.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~l 246 (470)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+..|..+++.+ +||||+++++++.+....++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357889999999999999999865 58899999997542 23455678899999988 89999999999999999999
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999997654 6899999999999999999999 899999999999999999999999999999854322
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcc---hhhHHh-hhhcCCccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEM---TLKHWV-NDWLPISTMEVVG 402 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~ 402 (470)
. ......+||+.|+|||++.+..++.++|+|||||++|||++|+.||........ ...... .......
T Consensus 164 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~------ 235 (345)
T 3a8x_A 164 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------ 235 (345)
T ss_dssp T--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC------
T ss_pred C--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC------
Confidence 1 223456799999999999999999999999999999999999999975321110 000000 0000000
Q ss_pred ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCH------HHHHHH
Q 040392 403 ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINA------REIVAK 447 (470)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~el~~~ 447 (470)
...+..++.++.+++.+||+.||++||++ .|+++|
T Consensus 236 ----------~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 236 ----------IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ----------CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ----------CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 00112346678999999999999999996 666654
No 130
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.9e-43 Score=344.23 Aligned_cols=253 Identities=16% Similarity=0.141 Sum_probs=207.4
Q ss_pred hhCCCCCCCeecccCceEEEEEE------eCCCcEEEEEEeecccchhhhhHHHHHHHHhcCC---CCcceeEEeeeccC
Q 040392 171 ATDGFSENNLIGRGGFGSVYKAR------LGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR---HRNLIKVISTCSNE 241 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~~~~~~~~~ 241 (470)
..++|.+.+.||+|+||.||+|. ..+++.||+|++.... ...+..|+++++.++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 35678999999999999999993 4568899999987543 345677888888886 99999999999999
Q ss_pred CeeeEEEecCCCCChHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---------
Q 040392 242 EFKALVLEYMPHGSLEKYMYS----SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD--------- 308 (470)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~--------- 308 (470)
+..++||||+++|+|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999975 3456999999999999999999999 999999999999999998
Q ss_pred --CCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhh
Q 040392 309 --NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK 386 (470)
Q Consensus 309 --~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~ 386 (470)
++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.....+.....
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~ 296 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE 296 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec
Confidence 899999999999765433333444566799999999999999999999999999999999999999875433221100
Q ss_pred HHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCC-CCHHHHHHHHHHHHHH
Q 040392 387 HWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQR-INAREIVAKLLKIRDS 454 (470)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-ps~~el~~~L~~i~~~ 454 (470)
...... ..+..+.+++..|++.+|.+| |+++++.+.|+++..+
T Consensus 297 ----------------~~~~~~---------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 297 ----------------GLFRRL---------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp ----------------SCCTTC---------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------hhcccc---------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 000000 114557789999999999999 5788888889888655
No 131
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.2e-44 Score=345.33 Aligned_cols=267 Identities=22% Similarity=0.363 Sum_probs=190.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhc--CCCCcceeEEeeeccCC----eee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKS--IRHRNLIKVISTCSNEE----FKA 245 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~~~~~~~~~~----~~~ 245 (470)
.++|.+.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 467999999999999999999874 899999998643 33456778888887 78999999999997765 789
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CCCeeecCCCCCCeeeCCCCCeEEeeeccc
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY-----SAPIIHCDLKPSNVLLDDNMVAHLSDFSIA 320 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a 320 (470)
+||||+++|+|.+++... .+++..+..++.|++.||+|||... +.+++||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999999999654 4778889999999999999999322 578999999999999999999999999999
Q ss_pred cccCCCCCcc--cccccccCccccCccccCCC------CCCCccchhhHHHHHHHHHhC----------CCCCCccccCc
Q 040392 321 KLLTGEDQSM--TQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLMETFTG----------KKPTNEIFNGE 382 (470)
Q Consensus 321 ~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~------~~~~~~DvwslGv~l~el~tg----------~~p~~~~~~~~ 382 (470)
.......... ......||+.|+|||++.+. .++.++||||||+++|||++| ..||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7664332221 12334799999999998776 445689999999999999999 55555432222
Q ss_pred chhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 383 MTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
.............. ... ..........++..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 236 ~~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 236 PSVEEMRKVVCEQK--------LRP-NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCCC-CHHHHTTSC--------CCC-CCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred ccHHHHHHHHHHhh--------cCC-CccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 11111111111111 001 111111223557789999999999999999999999999998863
No 132
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3.1e-43 Score=335.05 Aligned_cols=259 Identities=26% Similarity=0.423 Sum_probs=215.0
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
..++|++.+.||+|+||.||+|.+. ++..||+|.+... ....+.+.+|+++++.++||||+++++++.+....++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 3567889999999999999999875 4889999998754 3345678899999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 250 YMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
|+++++|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT- 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-
Confidence 999999999997644 45899999999999999999999 8999999999999999999999999999998765332
Q ss_pred cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
........+++.|+|||.+.+..++.++||||||+++|+|++ |..||....... ....+......
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~~~~~~~~~~------------ 231 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELLEKDYRM------------ 231 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHHHTTCCC------------
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhccCCC------------
Confidence 223334557889999999988899999999999999999999 999987643221 11111111100
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
..+..++.++.+++.+||..||++|||+.|+++.|+++...
T Consensus 232 ------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 232 ------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp ------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 11123467789999999999999999999999999998654
No 133
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.4e-43 Score=331.87 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=202.2
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|... ++..||+|++.... ......+.+|+.+++.++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467999999999999999999765 57899999986432 22345678899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++|+|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~-- 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-- 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCc--
Confidence 99999999999997654 5899999999999999999999 99999999999999999999999999999865432
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
.......+++.|+|||.+.+..++.++||||||+++|+|++|+.||......+. ... +... .
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~-~~~~-~------------- 223 (279)
T 3fdn_A 162 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKR-ISRV-E------------- 223 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH-HHHT-C-------------
T ss_pred --ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH-HHH-HHhC-C-------------
Confidence 122345789999999999999999999999999999999999999975322111 111 1000 0
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
...+..++..+.+++.+||+.||++||++.|+++|-
T Consensus 224 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 224 -----FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp -----CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred -----CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 001122356788999999999999999999999873
No 134
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=346.00 Aligned_cols=267 Identities=13% Similarity=0.146 Sum_probs=211.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeCC---------CcEEEEEEeecccchhhhhHHHHHHHHhcCCCCccee---------
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGD---------GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIK--------- 233 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~--------- 233 (470)
.++|++.+.||+|+||.||+|+... ++.||+|++... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3679999999999999999998753 789999998743 46888999999999999988
Q ss_pred ------EEeeecc-CCeeeEEEecCCCCChHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCee
Q 040392 234 ------VISTCSN-EEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVL 305 (470)
Q Consensus 234 ------~~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nil 305 (470)
+++++.. ....++||||+ +++|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 5666654 67889999999 99999999865 356899999999999999999999 899999999999999
Q ss_pred eCCCC--CeEEeeeccccccCCCCCc-----ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCcc
Q 040392 306 LDDNM--VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI 378 (470)
Q Consensus 306 l~~~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~ 378 (470)
++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999866432211 1223457999999999999989999999999999999999999999875
Q ss_pred ccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhh
Q 040392 379 FNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLR 457 (470)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~ 457 (470)
......+........... ....+... ....++.++.+++.+||+.||++||++.++++.|+++..+...
T Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKP-GPFVGPCG---------HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp TTCHHHHHHHHHHHHHSC-CCEECTTS---------CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHhccCCh-hhhhhhcc---------ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 433333333322211110 00000000 0112366789999999999999999999999999999876553
No 135
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.2e-43 Score=343.22 Aligned_cols=250 Identities=21% Similarity=0.255 Sum_probs=204.8
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeee
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 245 (470)
..++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+..|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3578999999999999999999875 47899999997542 23455677899999988 7999999999999999999
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+||||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999997654 5899999999999999999999 89999999999999999999999999999985432
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
. .......+||+.|+|||++.+..++.++|+|||||++|||++|+.||......+ ..........
T Consensus 174 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~------------ 238 (353)
T 2i0e_A 174 D--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-LFQSIMEHNV------------ 238 (353)
T ss_dssp T--TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCC------------
T ss_pred C--CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH-HHHHHHhCCC------------
Confidence 2 122345679999999999999999999999999999999999999997632211 1111111000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCC-----HHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN-----AREIVAK 447 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~el~~~ 447 (470)
..+..++.++.+++.+||..||++||+ +.|+++|
T Consensus 239 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 239 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred --------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 001234667899999999999999995 5777765
No 136
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=9.5e-43 Score=329.79 Aligned_cols=251 Identities=24% Similarity=0.290 Sum_probs=206.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|+++++.++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467899999999999999999865 4789999999876566677889999999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeeeccccccCCCC
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
+++++|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||++ +.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999987654 5899999999999999999999 9999999999999999 888999999999998764322
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
......+|+.|+|||.+.+. ++.++||||||+++|||++|+.||......+. ...........
T Consensus 164 ---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~------------ 226 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-MLKIREGTFTF------------ 226 (277)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHCCCCC------------
T ss_pred ---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCC------------
Confidence 22345689999999988654 89999999999999999999999976432211 11111100000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ......++.++.+++.+||+.||++||++.|++++
T Consensus 227 -~---~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 227 -P---EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp -C---HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -C---chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00112346778999999999999999999999875
No 137
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.7e-42 Score=329.76 Aligned_cols=265 Identities=19% Similarity=0.226 Sum_probs=213.0
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeee-ccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTC-SNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~-~~~~~~~lv~e 249 (470)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ....+..|+.+++.++|++++..+.++ ......++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 57899999999999999999986 579999999986543 335688899999999988876666555 56678899999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeeeccccccCCC
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~a~~~~~~ 326 (470)
|+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 88999999866677999999999999999999999 9999999999999999 48899999999999876543
Q ss_pred CCc-----ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCc--chhhHHhhhhcCCcccc
Q 040392 327 DQS-----MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE--MTLKHWVNDWLPISTME 399 (470)
Q Consensus 327 ~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 399 (470)
... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ..+...........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--- 238 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP--- 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC---
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc---
Confidence 321 12245679999999999999999999999999999999999999998643321 11111111110000
Q ss_pred cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhh
Q 040392 400 VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLR 457 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~ 457 (470)
.......++.++.+++.+||+.||++||++.++++.|+++......
T Consensus 239 ------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 239 ------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp ------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ------------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 0011134577899999999999999999999999999999766544
No 138
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-43 Score=341.74 Aligned_cols=261 Identities=23% Similarity=0.302 Sum_probs=203.5
Q ss_pred HHHHhhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc-----cchhhhhHHHHHHHHhcCCCCcceeEEeeecc
Q 040392 167 ELCRATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ-----CGRALKGFDVECEMMKSIRHRNLIKVISTCSN 240 (470)
Q Consensus 167 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~ 240 (470)
.+....++|++.+.||+|+||.||+|.. .++..||+|++... .....+.+.+|+++++.++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 3455678899999999999999999976 46889999998644 23455678899999999999999999999999
Q ss_pred CCeeeEEEecCCCCChHHhhhcC---------------------------------------CCCCCHHHHHHHHHHHHH
Q 040392 241 EEFKALVLEYMPHGSLEKYMYSS---------------------------------------NYILDIFQRLNIMIDVAS 281 (470)
Q Consensus 241 ~~~~~lv~e~~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~ 281 (470)
....++||||+++|+|.+++... ...+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 112356778889999999
Q ss_pred HHHHHhcCCCCCeeecCCCCCCeeeCCCC--CeEEeeeccccccCCCCC--cccccccccCccccCccccCC--CCCCCc
Q 040392 282 ALEYLHFGYSAPIIHCDLKPSNVLLDDNM--VAHLSDFSIAKLLTGEDQ--SMTQTQTLATIGYMAPEYGRE--GRVSTN 355 (470)
Q Consensus 282 ~L~~LH~~~~~~i~H~dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~--~~~~~~ 355 (470)
||+||| +.+|+||||||+||+++.++ .+||+|||++..+..... ........||+.|+|||.+.+ ..++.+
T Consensus 180 ~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999 89999999999999998776 899999999986543221 122345679999999999865 678999
Q ss_pred cchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCc
Q 040392 356 GDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESP 435 (470)
Q Consensus 356 ~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 435 (470)
+||||||+++|||++|+.||......+ ............. ......++.++.+++.+||+.||
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~----------------~~~~~~~~~~~~~li~~~l~~~p 319 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKKLCFE----------------NPNYNVLSPLARDLLSNLLNRNV 319 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCTT----------------SGGGGGSCHHHHHHHHHHSCSCT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcccccC----------------CcccccCCHHHHHHHHHHcCCCh
Confidence 999999999999999999997643322 1111111110000 01112346778999999999999
Q ss_pred cCCCCHHHHHHH
Q 040392 436 EQRINAREIVAK 447 (470)
Q Consensus 436 ~~Rps~~el~~~ 447 (470)
++||++.|++++
T Consensus 320 ~~Rps~~~~l~h 331 (345)
T 3hko_A 320 DERFDAMRALQH 331 (345)
T ss_dssp TTSCCHHHHHHS
T ss_pred hHCCCHHHHhcC
Confidence 999999999875
No 139
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.1e-42 Score=336.60 Aligned_cols=252 Identities=22% Similarity=0.318 Sum_probs=206.5
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccch------hhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGR------ALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
.++|++.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+++++.++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456899999999999999999865 6899999998754321 345688999999999999999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----CeEEeeeccc
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM----VAHLSDFSIA 320 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~----~~kl~Dfg~a 320 (470)
++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999754 46899999999999999999999 89999999999999999888 7999999999
Q ss_pred cccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccc
Q 040392 321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV 400 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (470)
....... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||......+ .+..... ...
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~----~~~--- 235 (321)
T 2a2a_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANITS----VSY--- 235 (321)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHT----TCC---
T ss_pred eecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHh----ccc---
Confidence 8764322 2234568999999999999999999999999999999999999997632211 1111100 000
Q ss_pred ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ........++..+.+++.+||..||++|||+.|++++
T Consensus 236 ------~---~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 236 ------D---FDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ------C---CCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ------c---cChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0001123346778999999999999999999999975
No 140
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=8.4e-43 Score=338.40 Aligned_cols=262 Identities=23% Similarity=0.378 Sum_probs=208.7
Q ss_pred hCCCCCCCeecccCceEEEEEEe------CCCcEEEEEEeecc-cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQ-CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
.++|++.+.||+|+||.||+|++ .++..||||.+... .......+.+|+.+++.++||||+++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46899999999999999999974 35778999998644 234556788899999999999999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEe
Q 040392 245 ALVLEYMPHGSLEKYMYSSN------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLS 315 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~---~~~~kl~ 315 (470)
++||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999997654 35889999999999999999999 899999999999999984 4569999
Q ss_pred eeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcC
Q 040392 316 DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLP 394 (470)
Q Consensus 316 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 394 (470)
|||++................+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.....
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~ 263 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGR 263 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCC
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHHhcCCC
Confidence 9999986644333333345568899999999988889999999999999999998 99998764221 11121111100
Q ss_pred CcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHh
Q 040392 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~ 456 (470)
. ..+..++..+.+++.+||+.||.+||++.|++++|+.+.....
T Consensus 264 ~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 264 M------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp C------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred C------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 0 0112346678999999999999999999999999999875443
No 141
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=8.6e-43 Score=331.27 Aligned_cols=252 Identities=20% Similarity=0.339 Sum_probs=206.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578999999999999999999764 58999999987543 334567888999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEeeeccccccCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV---AHLSDFSIAKLLTG 325 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~---~kl~Dfg~a~~~~~ 325 (470)
||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999998886654 5899999999999999999999 899999999999999986665 99999999976643
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
.. ......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||......+ .............
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~--------- 227 (284)
T 3kk8_A 161 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYP--------- 227 (284)
T ss_dssp SC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCC---------
T ss_pred Cc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH-HHHHHHhccccCC---------
Confidence 22 2234568999999999999999999999999999999999999997633221 1111111100000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
......++.++.+++.+||+.||++|||+.|++++
T Consensus 228 -------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 228 -------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp -------TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -------chhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00012346678999999999999999999999985
No 142
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-43 Score=366.98 Aligned_cols=256 Identities=23% Similarity=0.391 Sum_probs=206.7
Q ss_pred eecccCceEEEEEEeC---CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecCCCCC
Q 040392 180 LIGRGGFGSVYKARLG---DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPHGS 255 (470)
Q Consensus 180 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~ 255 (470)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|+++++.++||||+++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999753 46779999997543 3356778999999999999999999999976 56899999999999
Q ss_pred hHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc-ccccc
Q 040392 256 LEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS-MTQTQ 334 (470)
Q Consensus 256 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~ 334 (470)
|.+++......+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+++.+...... .....
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999877777999999999999999999999 899999999999999999999999999999876432221 12223
Q ss_pred cccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhhhh
Q 040392 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHF 413 (470)
Q Consensus 335 ~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (470)
..+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+..... .
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~------------------~ 558 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGKR------------------M 558 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHHHHTTCC------------------C
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCCC------------------C
Confidence 346789999999998899999999999999999998 999998754322 2222211110 1
Q ss_pred HhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhhc
Q 040392 414 VAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNV 459 (470)
Q Consensus 414 ~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~~ 459 (470)
..+..++.++.+++..||+.||++||++.++++.|+.+..+.....
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~ 604 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 604 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSC
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcccc
Confidence 1123467889999999999999999999999999999987665444
No 143
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=334.12 Aligned_cols=265 Identities=22% Similarity=0.275 Sum_probs=200.8
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++......++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 67899999999999999999875 58999999986443 2235667789999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
|+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-- 156 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc--
Confidence 99999998887644 46899999999999999999999 8999999999999999999999999999998764322
Q ss_pred ccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh-----------cCCc-
Q 040392 330 MTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW-----------LPIS- 396 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-----------~~~~- 396 (470)
.......+|..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+. ........ ....
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhcccccccccccccccc
Confidence 22234568999999998876 5689999999999999999999999976433211 11110000 0000
Q ss_pred --ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 397 --TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 397 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.....++..... .......++.++.+++.+||+.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 236 FSGVKIPDPEDMEP---LELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GTTCCCCCCSSCCC---HHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccCcCCCccccch---hhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000001000000 011112456778999999999999999999999976
No 144
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.5e-43 Score=348.07 Aligned_cols=276 Identities=20% Similarity=0.275 Sum_probs=211.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCC--eeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEE--FKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~--~~~lv 247 (470)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.... ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357899999999999999999865 58999999997543 334566788999999999999999999987654 77999
Q ss_pred EecCCCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----CCCCCeEEeeecccc
Q 040392 248 LEYMPHGSLEKYMYSSN--YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL----DDNMVAHLSDFSIAK 321 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill----~~~~~~kl~Dfg~a~ 321 (470)
|||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999997644 23899999999999999999999 8999999999999999 788889999999998
Q ss_pred ccCCCCCcccccccccCccccCccccCC--------CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhh---HHhh
Q 040392 322 LLTGEDQSMTQTQTLATIGYMAPEYGRE--------GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK---HWVN 390 (470)
Q Consensus 322 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~--------~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~---~~~~ 390 (470)
..... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||........... ....
T Consensus 165 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 76432 22234569999999998764 4678899999999999999999999976443322211 1111
Q ss_pred hhcCCcccccccccc-----cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392 391 DWLPISTMEVVGANL-----LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD 453 (470)
Q Consensus 391 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~ 453 (470)
...+........... ..............+..+.+++.+||+.||++||++.|+++.+.++..
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 111111100000000 000000111224457789999999999999999999999999988764
No 145
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-42 Score=332.98 Aligned_cols=269 Identities=23% Similarity=0.300 Sum_probs=202.0
Q ss_pred hhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccc-----hhhhhHHHHHHHHhcCC---CCcceeEEeeeccC
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG-----RALKGFDVECEMMKSIR---HRNLIKVISTCSNE 241 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~nIv~~~~~~~~~ 241 (470)
..++|++.+.||+|+||+||+|+. .+++.||+|++..... .....+.+|+++++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999985 5689999999864321 12345667888877775 99999999998765
Q ss_pred C-----eeeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEe
Q 040392 242 E-----FKALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLS 315 (470)
Q Consensus 242 ~-----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~ 315 (470)
. ..++||||++ |+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5789999997 59999997655 34899999999999999999999 8999999999999999999999999
Q ss_pred eeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC
Q 040392 316 DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI 395 (470)
Q Consensus 316 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (470)
|||++...... .......+|+.|+|||++.+..++.++||||||+++|||++|+.||......+ .+..........
T Consensus 163 Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred eCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 99999865432 22344678999999999999999999999999999999999999997643321 111111111000
Q ss_pred cccccc-----cccccC--chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 396 STMEVV-----GANLLS--QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 396 ~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...... ...... ...........++.++.+++.+||+.||++|||+.|+++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000000 000000 0000011123456788999999999999999999999875
No 146
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-42 Score=350.72 Aligned_cols=248 Identities=24% Similarity=0.343 Sum_probs=205.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++++.++||||+++++++......++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 367899999999999999999865 79999999997542 22345788999999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999999654 46899999999999999999999 9999999999999999999999999999998764322
Q ss_pred CcccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
.....+||+.|+|||++.+..+ +.++||||||+++|||++|+.||....... +...+. ....
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~--~~~~i~---~~~~--------- 233 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT--LFKKIC---DGIF--------- 233 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH--HHHHHH---TTCC---------
T ss_pred ---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH--HHHHHh---cCCc---------
Confidence 2234579999999999988765 689999999999999999999997632211 111111 0000
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+++.+||+.||++|||+.|+++|
T Consensus 234 -------~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 234 -------YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -------CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 0112235678899999999999999999999985
No 147
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=8.9e-43 Score=340.77 Aligned_cols=247 Identities=27% Similarity=0.352 Sum_probs=202.5
Q ss_pred CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
+.|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++......++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999985 578999999987542 234467889999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
||++ |+|.+++......+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 6898888766677999999999999999999999 899999999999999999999999999999765321
Q ss_pred cccccccccCccccCccccC---CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 329 SMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
....||+.|+|||++. ...++.++||||||+++|||++|+.||....... .+........+ ..
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~---------~~ 273 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESP---------AL 273 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCC---------CC
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCC---------CC
Confidence 2356899999999874 5678999999999999999999999987542211 11111111000 00
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
.+..++..+.+++.+||+.||++|||+.|++++.
T Consensus 274 ---------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 274 ---------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp ---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred ---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 0122356788999999999999999999998764
No 148
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=9.5e-43 Score=337.58 Aligned_cols=249 Identities=20% Similarity=0.257 Sum_probs=181.4
Q ss_pred CCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CCcceeEEeeeccCCeeeEEEecCCCCC
Q 040392 178 NNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRNLIKVISTCSNEEFKALVLEYMPHGS 255 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~e~~~~g~ 255 (470)
.+.||+|+||.||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999864 6899999999743 3456778999999997 9999999999999999999999999999
Q ss_pred hHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---CeEEeeeccccccCCCCCcccc
Q 040392 256 LEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM---VAHLSDFSIAKLLTGEDQSMTQ 332 (470)
Q Consensus 256 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~ 332 (470)
|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||++....... ...
T Consensus 93 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~ 166 (325)
T 3kn6_A 93 LFERIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPL 166 (325)
T ss_dssp HHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Ccc
Confidence 99999765 46899999999999999999999 99999999999999997665 89999999998654322 223
Q ss_pred cccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCc--chhhHHhhhhcCCcccccccccccCchh
Q 040392 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE--MTLKHWVNDWLPISTMEVVGANLLSQED 410 (470)
Q Consensus 333 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (470)
....+|+.|+|||++.+..++.++||||||+++|||++|+.||....... ............... .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~------------~ 234 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF------------S 234 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCC------------C
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCC------------C
Confidence 34568999999999999999999999999999999999999998643211 111111111111100 0
Q ss_pred hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 411 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
........++.++.+|+.+||+.||++|||+.|++++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 0011123457789999999999999999999998854
No 149
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.8e-43 Score=345.99 Aligned_cols=269 Identities=22% Similarity=0.313 Sum_probs=194.9
Q ss_pred hhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCC-CCcceeEEeeeccC--Cee
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIR-HRNLIKVISTCSNE--EFK 244 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~--~~~ 244 (470)
..++|++.+.||+|+||.||+|.. .+|+.||||++... .......+.+|+.+++.+. ||||+++++++... ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 467899999999999999999975 46899999998543 3345566778999999997 99999999998644 478
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 5999999764 5889999999999999999999 9999999999999999999999999999998653
Q ss_pred CCC-------------------CcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcch
Q 040392 325 GED-------------------QSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT 384 (470)
Q Consensus 325 ~~~-------------------~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~ 384 (470)
... ........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~ 239 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN-Q 239 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-H
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 211 1112234579999999999876 678999999999999999999999997643211 1
Q ss_pred hhHHhhhhcCCccccccc----------------------ccccCch------hhhhHhhhhhHHHHHHHHhhccCCCcc
Q 040392 385 LKHWVNDWLPISTMEVVG----------------------ANLLSQE------DIHFVAKEQCVSCVFNLAMECTVESPE 436 (470)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~----------------------~~~~~~~------~~~~~~~~~~~~~l~~l~~~cl~~dP~ 436 (470)
+..... .......+... ....... ......+..++.++.+|+.+||+.||+
T Consensus 240 ~~~i~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 240 LERIIG-VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHH-HHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHH-hcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 111111 11000000000 0000000 000001124567899999999999999
Q ss_pred CCCCHHHHHHH
Q 040392 437 QRINAREIVAK 447 (470)
Q Consensus 437 ~Rps~~el~~~ 447 (470)
+|||+.|+++|
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999987
No 150
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6.3e-43 Score=339.27 Aligned_cols=262 Identities=28% Similarity=0.455 Sum_probs=208.3
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcE--EEEEEeecc-cchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEE
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGME--VAVKVFNLQ-CGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv 247 (470)
++|++.+.||+|+||.||+|+.. ++.. +|+|.+... .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 67899999999999999999754 5664 499988643 234556788999999999 899999999999999999999
Q ss_pred EecCCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCe
Q 040392 248 LEYMPHGSLEKYMYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA 312 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~ 312 (470)
|||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997653 46899999999999999999999 9999999999999999999999
Q ss_pred EEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhh
Q 040392 313 HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVND 391 (470)
Q Consensus 313 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 391 (470)
||+|||++..... ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+..
T Consensus 182 kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~~~ 256 (327)
T 1fvr_A 182 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKLPQ 256 (327)
T ss_dssp EECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHGGG
T ss_pred EEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--HHHHhhc
Confidence 9999999874321 122233457889999999988889999999999999999998 999997643221 1111110
Q ss_pred hcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhhcc
Q 040392 392 WLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNVG 460 (470)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~~~ 460 (470)
... ...+..++.++.+++.+||..||++|||+.|++++|+++.........
T Consensus 257 ~~~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 307 (327)
T 1fvr_A 257 GYR------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVN 307 (327)
T ss_dssp TCC------------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSBC
T ss_pred CCC------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCccc
Confidence 000 001123467789999999999999999999999999999865444333
No 151
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.9e-43 Score=339.94 Aligned_cols=243 Identities=25% Similarity=0.318 Sum_probs=203.8
Q ss_pred hhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccc--------hhhhhHHHHHHHHhcCCCCcceeEEeeeccC
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--------RALKGFDVECEMMKSIRHRNLIKVISTCSNE 241 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~ 241 (470)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .....+..|+++++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456899999999999999999975 4689999999875421 2345677899999999999999999999999
Q ss_pred CeeeEEEecCCCC-ChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccc
Q 040392 242 EFKALVLEYMPHG-SLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIA 320 (470)
Q Consensus 242 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a 320 (470)
...++||||+.+| +|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999996554 5899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCCcccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccc
Q 040392 321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTME 399 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (470)
....... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....... .
T Consensus 178 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-------~--------- 238 (335)
T 3dls_A 178 AYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETV-------E--------- 238 (335)
T ss_dssp EECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGT-------T---------
T ss_pred eECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHH-------h---------
Confidence 8764332 2234568999999999988776 789999999999999999999997532110 0
Q ss_pred cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 400 VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.... .+..++.++.+++.+||+.||++|||+.|++++
T Consensus 239 ---~~~~--------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 ---AAIH--------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---TCCC--------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---hccC--------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 011236678999999999999999999999987
No 152
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-42 Score=327.53 Aligned_cols=247 Identities=22% Similarity=0.343 Sum_probs=182.4
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 36799999999999999999975 468999999986542 23355788899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+ +++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 668888886554 5899999999999999999999 8999999999999999999999999999997654322
Q ss_pred CcccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
......+|+.|+|||.+.+..+ +.++||||||+++|||++|+.||....... ....+.....
T Consensus 167 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~------------ 229 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV--LFKNISNGVY------------ 229 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCC------------
T ss_pred ---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCC------------
Confidence 2234568999999999987765 789999999999999999999997632211 1111110000
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 230 -------~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 230 -------TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -------CCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0112236678899999999999999999999875
No 153
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.1e-43 Score=331.89 Aligned_cols=252 Identities=30% Similarity=0.444 Sum_probs=200.7
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccC-CeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNE-EFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-~~~~lv~e~ 250 (470)
.++|++.+.||+|+||.||+|+.. |+.||+|++... ...+.+.+|+++++.++||||+++++++.+. ...++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 467899999999999999999884 899999998743 2456788999999999999999999987544 578999999
Q ss_pred CCCCChHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 251 MPHGSLEKYMYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
+++++|.+++..... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 999999999976542 3788999999999999999999 899999999999999999999999999998755322
Q ss_pred ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.....
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~~~~~~-------------- 232 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKGYK-------------- 232 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHHTTTCC--------------
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhcCCC--------------
Confidence 123357889999999988889999999999999999998 999987643221 1111111000
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
...+..++..+.+++.+||+.||++||++.|+++.|++++..
T Consensus 233 ----~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 233 ----MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 011223467789999999999999999999999999999754
No 154
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.7e-43 Score=336.89 Aligned_cols=269 Identities=22% Similarity=0.266 Sum_probs=200.2
Q ss_pred hCCCCCC-CeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSEN-NLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.+.|++. +.||+|+||.||+|.. .+++.||||++..........+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4567774 7899999999999985 46899999999766555667788999999985 7999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEeeeccccccCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV---AHLSDFSIAKLLTG 325 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~---~kl~Dfg~a~~~~~ 325 (470)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999997654 5899999999999999999999 899999999999999998776 99999999876532
Q ss_pred CCC-----cccccccccCccccCccccCC-----CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhh-hhcC
Q 040392 326 EDQ-----SMTQTQTLATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVN-DWLP 394 (470)
Q Consensus 326 ~~~-----~~~~~~~~~t~~y~aPE~~~~-----~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~-~~~~ 394 (470)
... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||.........+..... ....
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 211 111223468999999999864 45889999999999999999999999865432211000000 0000
Q ss_pred CcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
....+.+........ ......++.++.+++.+||+.||++|||+.|+++|
T Consensus 247 ~~~~~~i~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 247 NMLFESIQEGKYEFP---DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHCCCCCC---HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhccCcccC---chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 000000000000000 01112346779999999999999999999999985
No 155
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.3e-43 Score=354.18 Aligned_cols=249 Identities=22% Similarity=0.280 Sum_probs=196.5
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc---cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .......+..|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999975 46899999999754 233445677899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS-APIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
|||+++|+|.+++.... .+++..+..++.|++.||+||| + .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999997654 6899999999999999999999 7 89999999999999999999999999999754322
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
........||+.|+|||++.+..++.++|||||||++|||++|+.||......+ +...+... ..
T Consensus 303 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~i~~~---~~--------- 366 (446)
T 4ejn_A 303 --GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFELILME---EI--------- 366 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHC---CC---------
T ss_pred --CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH--HHHHHHhC---CC---------
Confidence 222345679999999999999999999999999999999999999997632211 11111100 00
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCC-----CHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-----NAREIVAK 447 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~el~~~ 447 (470)
..+..++.++.+++.+||+.||.+|| ++.|+++|
T Consensus 367 -------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 367 -------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 00122366789999999999999999 99999875
No 156
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-42 Score=329.92 Aligned_cols=251 Identities=25% Similarity=0.350 Sum_probs=198.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|.+.+.||+|+||.||+|+.. ++..||+|++.... ....+.+.+|+++++.++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 457899999999999999999764 68999999987553 3345678899999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeeecccccc
Q 040392 250 YMPHGSLEKYMYSS---NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 250 ~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~a~~~ 323 (470)
|+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988543 356899999999999999999999 8999999999999999 55688999999999765
Q ss_pred CCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392 324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403 (470)
Q Consensus 324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (470)
... .......+|+.|+|||.+. ..++.++||||||+++|||++|+.||......+. ........+....
T Consensus 178 ~~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~~~~~~~~~~~----- 246 (285)
T 3is5_A 178 KSD---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQKATYKEPNYAV----- 246 (285)
T ss_dssp ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHCCCCCCC-----
T ss_pred CCc---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--HhhhccCCccccc-----
Confidence 432 2223456899999999875 5689999999999999999999999976432211 1111110000000
Q ss_pred cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.....+.++.+++.+||+.||++|||+.|++++
T Consensus 247 -----------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 247 -----------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -----------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001125668899999999999999999999864
No 157
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3e-42 Score=328.88 Aligned_cols=262 Identities=23% Similarity=0.364 Sum_probs=209.2
Q ss_pred hCCCCCCC-eecccCceEEEEEEe---CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeee
Q 040392 172 TDGFSENN-LIGRGGFGSVYKARL---GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 172 ~~~~~~~~-~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 245 (470)
.++|.+.+ .||+|+||.||+|.+ .+++.||||++.... ....+.+.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 999999999999954 246889999987542 23356788999999999999999999999 556778
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+||||+++++|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.....
T Consensus 94 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999997654 5899999999999999999999 89999999999999999999999999999987644
Q ss_pred CCCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392 326 EDQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403 (470)
Q Consensus 326 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (470)
.... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+......
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~-------- 239 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGERM-------- 239 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCC--------
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCC--------
Confidence 3322 12223446788999999988889999999999999999999 99999764322 112221111100
Q ss_pred cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhh
Q 040392 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN 458 (470)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~ 458 (470)
..+..++.++.+++.+||+.||++||++.++++.|+++..+....
T Consensus 240 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 240 ----------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 011234677999999999999999999999999999998765443
No 158
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.4e-42 Score=326.35 Aligned_cols=247 Identities=23% Similarity=0.372 Sum_probs=198.4
Q ss_pred CCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeecc----CCeeeE
Q 040392 174 GFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSN----EEFKAL 246 (470)
Q Consensus 174 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~l 246 (470)
.|.+.+.||+|+||.||+|... ++..||+|.+... .....+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677789999999999999764 6889999998754 23456678899999999999999999998754 456899
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeC-CCCCeEEeeecccccc
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP--IIHCDLKPSNVLLD-DNMVAHLSDFSIAKLL 323 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dlkp~Nill~-~~~~~kl~Dfg~a~~~ 323 (470)
||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+ ++||||||+||+++ .++.+||+|||++...
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999997643 5899999999999999999999 888 99999999999997 8899999999999754
Q ss_pred CCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392 324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403 (470)
Q Consensus 324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (470)
... ......+|+.|+|||.+. +.++.++||||||+++|+|++|+.||..................+.
T Consensus 183 ~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------- 249 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA-------- 249 (290)
T ss_dssp CTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG--------
T ss_pred ccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc--------
Confidence 322 223456899999999886 4589999999999999999999999976433222111111100000
Q ss_pred cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+...+.++.+++.+||+.||.+|||+.|++++
T Consensus 250 ----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 ----------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0112235678999999999999999999999875
No 159
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3e-42 Score=327.37 Aligned_cols=257 Identities=23% Similarity=0.323 Sum_probs=206.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccc------hhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG------RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356889999999999999999875 689999999875422 1356788999999999999999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----CeEEeeeccc
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM----VAHLSDFSIA 320 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~----~~kl~Dfg~a 320 (470)
++||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||||+||+++.++ .+||+|||++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999999996543 6899999999999999999999 89999999999999998877 8999999999
Q ss_pred cccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccc
Q 040392 321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV 400 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (470)
....... ......+++.|+|||.+.+..++.++||||||+++|+|++|+.||......+ ...........
T Consensus 160 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~------ 229 (283)
T 3bhy_A 160 HKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTNISAVNYD------ 229 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTTCCC------
T ss_pred eeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHHhHhcccC------
Confidence 8764322 2234568999999999998899999999999999999999999997643211 11111000000
Q ss_pred ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH--HHHHH
Q 040392 401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK--LLKIR 452 (470)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~--L~~i~ 452 (470)
........++..+.+++.+||..||++||++.|++++ ++++.
T Consensus 230 ----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 230 ----------FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp ----------CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred ----------CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0011123346778999999999999999999999984 45554
No 160
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.5e-42 Score=339.60 Aligned_cols=274 Identities=24% Similarity=0.266 Sum_probs=207.9
Q ss_pred cCHHHHHHhhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCC-----CCcceeEEe
Q 040392 163 FSHLELCRATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-----HRNLIKVIS 236 (470)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~nIv~~~~ 236 (470)
++..+.....++|.+.+.||+|+||.||+|+. .+++.||||++... ......+..|+.+++.++ ||||+++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 34444445578999999999999999999986 46899999998632 334456777999999986 999999999
Q ss_pred eeccCCeeeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-------
Q 040392 237 TCSNEEFKALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD------- 308 (470)
Q Consensus 237 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~------- 308 (470)
++...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.
T Consensus 104 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~ 179 (360)
T 3llt_A 104 KFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSL 179 (360)
T ss_dssp EEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEE
T ss_pred eeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccc
Confidence 999999999999999 889999997655 45899999999999999999999 999999999999999975
Q ss_pred ------------------CCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh
Q 040392 309 ------------------NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT 370 (470)
Q Consensus 309 ------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t 370 (470)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~ 254 (360)
T 3llt_A 180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254 (360)
T ss_dssp EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred cchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH
Confidence 889999999999865322 234568999999999999999999999999999999999
Q ss_pred CCCCCCccccCcchhhHHhhhhcCCc-----------ccccccccc--------cC-chhhh------hHhhhhhHHHHH
Q 040392 371 GKKPTNEIFNGEMTLKHWVNDWLPIS-----------TMEVVGANL--------LS-QEDIH------FVAKEQCVSCVF 424 (470)
Q Consensus 371 g~~p~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~--------~~-~~~~~------~~~~~~~~~~l~ 424 (470)
|+.||......+ .+........+.. .....+... .. ..... ...+...+..+.
T Consensus 255 g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (360)
T 3llt_A 255 GSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFC 333 (360)
T ss_dssp SSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHH
T ss_pred CCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHH
Confidence 999997643221 1111111000000 000000000 00 00000 000111236788
Q ss_pred HHHhhccCCCccCCCCHHHHHHH
Q 040392 425 NLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 425 ~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
+|+.+||+.||++|||+.|+++|
T Consensus 334 ~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 334 DFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp HHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HHHHHHhcCChhhCCCHHHHhcC
Confidence 99999999999999999999864
No 161
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.7e-43 Score=363.69 Aligned_cols=258 Identities=27% Similarity=0.446 Sum_probs=211.3
Q ss_pred hhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
..++|++.+.||+|+||.||+|++.++..||||+++... ...+.+.+|+++++.++||||+++++++.+ +..++||||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~ 342 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 342 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeeh
Confidence 356788889999999999999999888899999997543 234678999999999999999999999876 667899999
Q ss_pred CCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 251 MPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 251 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
+++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++...... .
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 418 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 418 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-H
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-e
Confidence 99999999997532 45899999999999999999999 8999999999999999999999999999998653211 1
Q ss_pred ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ 408 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (470)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.....
T Consensus 419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i~~~~~-------------- 482 (535)
T 2h8h_A 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYR-------------- 482 (535)
T ss_dssp HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHHHTTCC--------------
T ss_pred ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC--------------
Confidence 11223456788999999988899999999999999999999 999997643321 1111111100
Q ss_pred hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
...+..++.++.+|+.+||+.||++|||+.+|++.|+++..+
T Consensus 483 ----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 483 ----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 011234577899999999999999999999999999988643
No 162
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=336.00 Aligned_cols=256 Identities=23% Similarity=0.281 Sum_probs=190.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CCcceeEEeee--------ccC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRNLIKVISTC--------SNE 241 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~--------~~~ 241 (470)
..+|++.+.||+|+||.||+|++. +++.||+|++..........+.+|+.+++++. ||||+++++++ ...
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457899999999999999999864 68999999987666666777889999999996 99999999998 344
Q ss_pred CeeeEEEecCCCCChHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeCCCCCeEEeee
Q 040392 242 EFKALVLEYMPHGSLEKYMYS--SNYILDIFQRLNIMIDVASALEYLHFGYSAP--IIHCDLKPSNVLLDDNMVAHLSDF 317 (470)
Q Consensus 242 ~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dlkp~Nill~~~~~~kl~Df 317 (470)
...++||||+. |+|.+++.. ....+++..++.++.|++.||.||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 56789999996 699998865 3456899999999999999999999 888 999999999999999999999999
Q ss_pred ccccccCCCCCcc----------cccccccCccccCcccc---CCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcch
Q 040392 318 SIAKLLTGEDQSM----------TQTQTLATIGYMAPEYG---REGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT 384 (470)
Q Consensus 318 g~a~~~~~~~~~~----------~~~~~~~t~~y~aPE~~---~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~ 384 (470)
|++.......... ......+|+.|+|||++ .+..++.++||||||+++|||++|+.||........
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~- 261 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI- 261 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh-
Confidence 9998764322211 11134589999999998 566789999999999999999999999975322110
Q ss_pred hhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 385 LKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
....... .....++..+.+++.+||+.||++||++.|++++|+++...
T Consensus 262 ----~~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~ 309 (337)
T 3ll6_A 262 ----VNGKYSI------------------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA 309 (337)
T ss_dssp --------CCC------------------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----hcCcccC------------------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0000000 00112234477999999999999999999999999999754
No 163
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.5e-42 Score=333.12 Aligned_cols=251 Identities=20% Similarity=0.310 Sum_probs=203.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|.+.+.||+|+||.||+|+.. +|+.||+|++..........+.+|+++++.++||||+++++++.+....++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 457889999999999999999865 6899999999865444556788999999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeeeccccccCCCC
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||||+||++ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-- 161 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-- 161 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC--
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC--
Confidence 99999999986554 5899999999999999999999 8999999999999999 7889999999999875432
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
.......+|+.|+|||.+.+..++.++||||||+++|||++|+.||......+ .............
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~----------- 227 (304)
T 2jam_A 162 --GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK-LFEKIKEGYYEFE----------- 227 (304)
T ss_dssp --BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHCCCCCC-----------
T ss_pred --CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCC-----------
Confidence 12234568999999999999999999999999999999999999997643211 1111111100000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
......++.++.+++.+||..||++||++.|++++
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 228 -----SPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp -----TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred -----ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00112346778999999999999999999999875
No 164
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=3.1e-42 Score=327.21 Aligned_cols=250 Identities=25% Similarity=0.383 Sum_probs=205.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeecc----------
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN---------- 240 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~---------- 240 (470)
.++|++.+.||+|+||.||+|... +++.||+|.+.... ..+.+|+++++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 457889999999999999999875 79999999987543 356789999999999999999998754
Q ss_pred ------CCeeeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeE
Q 040392 241 ------EEFKALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAH 313 (470)
Q Consensus 241 ------~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~k 313 (470)
....++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 445789999999999999997543 56899999999999999999999 89999999999999999999999
Q ss_pred EeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc
Q 040392 314 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL 393 (470)
Q Consensus 314 l~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (470)
|+|||++....... ......+++.|+|||.+.+..++.++||||||+++|||++|..|+.... .+.....
T Consensus 163 l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~~~~~ 232 (284)
T 2a19_B 163 IGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFFTDLR 232 (284)
T ss_dssp ECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHHHHHH
T ss_pred ECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHHHHhh
Confidence 99999998764332 2234568999999999998889999999999999999999998864311 1111110
Q ss_pred CCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHh
Q 040392 394 PISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL 456 (470)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~ 456 (470)
.... +..++.++.+++.+||+.||++||++.|++++|+.+..+..
T Consensus 233 ~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 233 DGII------------------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp TTCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred cccc------------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 0000 11235568899999999999999999999999999975543
No 165
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-42 Score=337.78 Aligned_cols=271 Identities=23% Similarity=0.262 Sum_probs=201.7
Q ss_pred HHhhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccc-----hhhhhHHHHHHHHhcCCCCcceeEEeeeccCC
Q 040392 169 CRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-----RALKGFDVECEMMKSIRHRNLIKVISTCSNEE 242 (470)
Q Consensus 169 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~ 242 (470)
....++|++.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+++++.++||||+++++++....
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344678999999999999999999865 589999999864321 12356788999999999999999999999999
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 99999999986 899999877777899999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc---cc
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS---TM 398 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~ 398 (470)
..... .......+|+.|+|||.+.+. .++.++||||||+++|||++|..||......+ .+........... ..
T Consensus 162 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 162 FGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWP 238 (346)
T ss_dssp TTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSS
T ss_pred ccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhh
Confidence 64322 223345789999999998764 48899999999999999999999987643221 1111111110000 00
Q ss_pred ---ccccc---cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 399 ---EVVGA---NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 399 ---~~~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+. ...... ........++.++.+++.+||+.||++|||+.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGI-PLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCC-CHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCC-ChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000 000000 0001113446789999999999999999999999986
No 166
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.1e-42 Score=333.60 Aligned_cols=253 Identities=24% Similarity=0.330 Sum_probs=202.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
.++|++.+.||+|+||.||+|... +++.||+|++..........+..|+++++.++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467999999999999999999875 5899999999766666677888999999999999999999999999999999999
Q ss_pred CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392 251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 330 (470)
Q Consensus 251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 330 (470)
+++++|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++...... ..
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 172 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--LQ 172 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--HH
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--cc
Confidence 9999999999876667999999999999999999999 899999999999999999999999999987543111 11
Q ss_pred cccccccCccccCcccc-----CCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 331 TQTQTLATIGYMAPEYG-----REGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 331 ~~~~~~~t~~y~aPE~~-----~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
......+|+.|+|||.+ .+..++.++||||||+++|+|++|+.||....... ..........+.
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~---------- 241 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDPPT---------- 241 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCC----------
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCCcc----------
Confidence 12235689999999987 46678999999999999999999999997643221 111111110000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+..++.++.+++.+||+.||++|||+.|++++
T Consensus 242 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 242 -------LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp -------CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred -------cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 01123346678999999999999999999999874
No 167
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=5.8e-42 Score=327.26 Aligned_cols=252 Identities=24% Similarity=0.371 Sum_probs=200.8
Q ss_pred CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392 173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
++|.....||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 4456667999999999999985 468899999998766666778899999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-CCCeEEeeeccccccCCCCC
Q 040392 252 PHGSLEKYMYSSN--YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD-NMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 252 ~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~~ 328 (470)
++++|.+++.... ...++..+..++.|++.||.||| +.+++|+||||+||+++. ++.+||+|||++.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 9999999997653 34578889999999999999999 899999999999999987 8999999999998764321
Q ss_pred cccccccccCccccCccccCCCC--CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 329 SMTQTQTLATIGYMAPEYGREGR--VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~--~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
.......+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||................... +
T Consensus 178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--------~--- 245 (295)
T 2clq_A 178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH--------P--- 245 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCC--------C---
T ss_pred -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccc--------c---
Confidence 1223456899999999987643 7899999999999999999999997543222111110000000 0
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+++.+||+.||++||++.|++++
T Consensus 246 -------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 246 -------EIPESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp -------CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred -------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0112346678999999999999999999999864
No 168
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.4e-42 Score=338.10 Aligned_cols=275 Identities=20% Similarity=0.234 Sum_probs=203.5
Q ss_pred HHHHHHhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccch-----------hhhhHHHHHHHHhcCCCCccee
Q 040392 165 HLELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGR-----------ALKGFDVECEMMKSIRHRNLIK 233 (470)
Q Consensus 165 ~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~nIv~ 233 (470)
..++....++|.+.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|+++++.++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 34667778999999999999999999999888999999998543211 2367889999999999999999
Q ss_pred EEeeec-----cCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC
Q 040392 234 VISTCS-----NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD 308 (470)
Q Consensus 234 ~~~~~~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~ 308 (470)
+++++. .....++||||++ |+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcC
Confidence 999983 3446799999997 5999998877778999999999999999999999 899999999999999999
Q ss_pred CCCeEEeeeccccccCCCCCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhH
Q 040392 309 NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKH 387 (470)
Q Consensus 309 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~ 387 (470)
++.+||+|||++...... .......+|+.|+|||.+.+ ..++.++||||||+++|+|++|+.||......+ .+..
T Consensus 170 ~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~ 245 (362)
T 3pg1_A 170 NNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNK 245 (362)
T ss_dssp TCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHH
T ss_pred CCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 999999999999754322 22334578999999998876 678999999999999999999999997643211 1111
Q ss_pred HhhhhcCCccc-----------ccccccccC-chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 388 WVNDWLPISTM-----------EVVGANLLS-QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 388 ~~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
........... ......... ...........++..+.+++.+||+.||++|||+.|+++|
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 11111000000 000000000 0001112223446778999999999999999999999975
No 169
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.5e-42 Score=342.64 Aligned_cols=254 Identities=24% Similarity=0.286 Sum_probs=195.3
Q ss_pred HhhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--------chhhhhHHHHHHHHhcCCCCcceeEEeeecc
Q 040392 170 RATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--------GRALKGFDVECEMMKSIRHRNLIKVISTCSN 240 (470)
Q Consensus 170 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~ 240 (470)
...++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999754 58999999987542 1223467889999999999999999999865
Q ss_pred CCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---CeEEeee
Q 040392 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM---VAHLSDF 317 (470)
Q Consensus 241 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~---~~kl~Df 317 (470)
+..++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 45789999999999999986544 6899999999999999999999 89999999999999997544 5999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccCC---CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcC
Q 040392 318 SIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394 (470)
Q Consensus 318 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (470)
|+++..... .......||+.|+|||++.+ ..++.++||||||+++|+|++|+.||........ +...+.....
T Consensus 287 G~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i~~~~~ 362 (419)
T 3i6u_A 287 GHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSGKY 362 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHHHTTCC
T ss_pred ccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHHhcCCC
Confidence 999875422 22234679999999999853 5688899999999999999999999976433322 2221111100
Q ss_pred CcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ........++.++.+++.+||+.||++||++.|+++|
T Consensus 363 ~---------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 363 N---------------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp C---------------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred C---------------CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0 0011123346778999999999999999999999986
No 170
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.6e-42 Score=348.90 Aligned_cols=262 Identities=22% Similarity=0.225 Sum_probs=196.1
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccC------C
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNE------E 242 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~ 242 (470)
.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 578999999999999999999754 6899999999754 334466788999999999999999999998554 4
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++||||+++ +|.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 56999999976 56666643 3889999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC-------
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI------- 395 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 395 (470)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ .+...+......
T Consensus 214 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 214 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ---C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTT
T ss_pred cCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHH
Confidence 5422 22345679999999999999999999999999999999999999997643211 111111100000
Q ss_pred ---------------c---ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 396 ---------------S---TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 396 ---------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ............ ........+.++.+|+.+||+.||++|||+.|+++|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPA---DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCC---SSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCccccccc---ccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 000000000000 001112236678999999999999999999999986
No 171
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.2e-42 Score=352.31 Aligned_cols=251 Identities=24% Similarity=0.368 Sum_probs=207.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 466889999999999999999864 69999999996542 23345678899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 248 LEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
|||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987654 35899999999999999999999 899999999999999999999999999999876432
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcc--hhhHHhhhhcCCccccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEM--TLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 404 (470)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+...+... +..
T Consensus 340 ~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~-~~~-------- 407 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-PEE-------- 407 (576)
T ss_dssp C---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHC-CCC--------
T ss_pred c---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcc-ccc--------
Confidence 2 22345799999999999998999999999999999999999999986433211 111111110 000
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCC-----CHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-----NAREIVAK 447 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~el~~~ 447 (470)
.+..++.++.+|+.+||+.||++|| ++.|+++|
T Consensus 408 ----------~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 408 ----------YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ----------CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ----------CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0123366789999999999999999 78999876
No 172
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=4.6e-42 Score=345.68 Aligned_cols=201 Identities=24% Similarity=0.338 Sum_probs=168.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccC-----Ce
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNE-----EF 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~ 243 (470)
.++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+++++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 578999999999999999999764 5889999999653 233456788999999999999999999998765 57
Q ss_pred eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
.++||||++ |+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 5999999654 46899999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCc--------------------ccccccccCccccCcccc-CCCCCCCccchhhHHHHHHHHHhCCCCCCc
Q 040392 324 TGEDQS--------------------MTQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFTGKKPTNE 377 (470)
Q Consensus 324 ~~~~~~--------------------~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslGv~l~el~tg~~p~~~ 377 (470)
...... ......+||+.|+|||++ ....++.++|||||||++|||++|..||..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 433211 123556899999999985 566799999999999999999987666543
No 173
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.1e-42 Score=335.85 Aligned_cols=271 Identities=23% Similarity=0.278 Sum_probs=198.0
Q ss_pred HHhhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeee
Q 040392 169 CRATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 169 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 245 (470)
....++|++.+.||+|+||.||+|.. .+++.||||++.... ......+.+|+++++.++||||+++++++.+....+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34567899999999999999999975 468999999986543 223456678999999999999999999999999999
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee-----CCCCCeEEeeeccc
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL-----DDNMVAHLSDFSIA 320 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill-----~~~~~~kl~Dfg~a 320 (470)
+||||+++ +|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++
T Consensus 110 lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 99999975 9999997654 5899999999999999999999 8999999999999999 45556999999999
Q ss_pred cccCCCCCcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh-cCCc-c
Q 040392 321 KLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW-LPIS-T 397 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~-~ 397 (470)
...... ........+|+.|+|||++.+. .++.++|||||||++|||++|+.||......+ .+....... .+.. .
T Consensus 185 ~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 185 RAFGIP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTT 261 (329)
T ss_dssp HHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTT
T ss_pred cccCCc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhh
Confidence 876422 1223345689999999998774 48999999999999999999999997643221 111111110 0000 0
Q ss_pred -ccc-----cccc--ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 398 -MEV-----VGAN--LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 398 -~~~-----~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
... .... ...........+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 000 0000 0011112222334457789999999999999999999999874
No 174
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.2e-42 Score=330.22 Aligned_cols=252 Identities=28% Similarity=0.367 Sum_probs=203.0
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
..++|++.+.||+|+||.||+|... +|+.||+|.+.... ....+.+|+.+++.++||||+++++++......++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567999999999999999999865 58999999987542 34668889999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
|+++++|.+++......+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-- 179 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--
Confidence 99999999999766667899999999999999999999 8999999999999999999999999999998664321
Q ss_pred ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCch
Q 040392 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (470)
.......+++.|+|||.+.+..++.++||||||+++|+|++|+.||........ ........+..
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~------------- 244 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA--IFMIPTNPPPT------------- 244 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHSCCCC-------------
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhcCCCcc-------------
Confidence 223345689999999999998999999999999999999999999976432111 11111000000
Q ss_pred hhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 410 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+..++..+.+++.+||..||.+|||+.|++++
T Consensus 245 ---~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 245 ---FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ---CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00122346678999999999999999999999874
No 175
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.4e-42 Score=340.24 Aligned_cols=246 Identities=26% Similarity=0.306 Sum_probs=192.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHH-HhcCCCCcceeEEeeeccCCeeeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEM-MKSIRHRNLIKVISTCSNEEFKAL 246 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~nIv~~~~~~~~~~~~~l 246 (470)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+..|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999865 58899999997543 2233445566666 577899999999999999999999
Q ss_pred EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392 247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~ 326 (470)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999997644 5789999999999999999999 999999999999999999999999999999864322
Q ss_pred CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
.......+||+.|+|||++.+..++.++|+|||||++|||++|+.||......+ .......... .
T Consensus 193 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-~~~~i~~~~~--~---------- 257 (373)
T 2r5t_A 193 --NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNILNKPL--Q---------- 257 (373)
T ss_dssp --CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-HHHHHHHSCC--C----------
T ss_pred --CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhccc--C----------
Confidence 122345679999999999999999999999999999999999999997632221 1111111000 0
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREI 444 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el 444 (470)
.+..++.++.+++.+||+.||++||++.+.
T Consensus 258 --------~~~~~~~~~~~li~~lL~~dp~~R~~~~~~ 287 (373)
T 2r5t_A 258 --------LKPNITNSARHLLEGLLQKDRTKRLGAKDD 287 (373)
T ss_dssp --------CCSSSCHHHHHHHHHHTCSSGGGSTTTTTT
T ss_pred --------CCCCCCHHHHHHHHHHcccCHHhCCCCCCC
Confidence 012235678899999999999999998533
No 176
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.1e-41 Score=339.30 Aligned_cols=251 Identities=22% Similarity=0.272 Sum_probs=193.0
Q ss_pred hCCCCCC-CeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHh-cCCCCcceeEEeeecc----CCee
Q 040392 172 TDGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMK-SIRHRNLIKVISTCSN----EEFK 244 (470)
Q Consensus 172 ~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~nIv~~~~~~~~----~~~~ 244 (470)
.++|.+. +.||+|+||.||+|... +|+.||||++.. ...+.+|+.++. ..+||||+++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3556665 68999999999999765 689999999863 234667888874 4589999999998865 5678
Q ss_pred eEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeeeccc
Q 040392 245 ALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIA 320 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~---~~~~kl~Dfg~a 320 (470)
++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||++
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999997654 46899999999999999999999 899999999999999997 789999999999
Q ss_pred cccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcch--hhHHhhhhcCCccc
Q 040392 321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT--LKHWVNDWLPISTM 398 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~ 398 (470)
+..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+.... .
T Consensus 212 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~----~ 284 (400)
T 1nxk_A 212 KETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ----Y 284 (400)
T ss_dssp EECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTC----C
T ss_pred cccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCc----c
Confidence 865422 2223467899999999999999999999999999999999999999764332211 111111000 0
Q ss_pred ccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
.... .....++.++.+|+.+||+.||++|||+.|+++|-
T Consensus 285 ~~~~-----------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 285 EFPN-----------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp CCCT-----------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred cCCC-----------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0000 00123467789999999999999999999999874
No 177
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=3.9e-42 Score=326.87 Aligned_cols=247 Identities=23% Similarity=0.337 Sum_probs=204.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367899999999999999999865 57899999986432 22345688899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++|+|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999997654 5899999999999999999999 999999999999999999999999999998765322
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
......+++.|+|||.+.+..++.++||||||+++|+|++|+.||......+. ...... ...
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~----~~~---------- 229 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET-HRRIVN----VDL---------- 229 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHT----TCC----------
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH-HHHHhc----ccc----------
Confidence 22345689999999999999999999999999999999999999976332111 111100 000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+++.+||+.||.+||++.|++++
T Consensus 230 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 230 ------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred ------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 0012235678899999999999999999999975
No 178
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.9e-42 Score=337.47 Aligned_cols=253 Identities=22% Similarity=0.314 Sum_probs=200.6
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEEE
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ....+|++++.++ +||||+++++++.+....++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3567999999999999999999865 68999999997543 2345688888887 7999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC----CCeEEeeeccccccC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDN----MVAHLSDFSIAKLLT 324 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~----~~~kl~Dfg~a~~~~ 324 (470)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++..+ +.+||+|||++....
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999997654 6899999999999999999999 8999999999999998433 359999999998764
Q ss_pred CCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
... .......+|+.|+|||++.+..++.++|||||||++|||++|+.||....... ............. ..
T Consensus 172 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~~~~-~~---- 242 (342)
T 2qr7_A 172 AEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEILARIGSGKF-SL---- 242 (342)
T ss_dssp CTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHHHHHHHCCC-CC----
T ss_pred CCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHHHHHccCCc-cc----
Confidence 332 22234578999999999988789999999999999999999999997532211 1111111100000 00
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.. .....++.++.+++.+||..||++||++.|+++|
T Consensus 243 -~~------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 243 -SG------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp -CS------TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -Cc------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 0012346778999999999999999999999875
No 179
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.4e-42 Score=328.97 Aligned_cols=249 Identities=19% Similarity=0.279 Sum_probs=206.1
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467889999999999999999865 58899999986542 23456788899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999886544 6899999999999999999999 8999999999999999999999999999998764222
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
.......+|+.|+|||.+.+..++.++||||||+++|+|++|+.||......+. ....... ..
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~----~~---------- 232 (294)
T 2rku_A 170 --ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YLRIKKN----EY---------- 232 (294)
T ss_dssp --CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTT----CC----------
T ss_pred --cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHhhc----cC----------
Confidence 222345689999999999988899999999999999999999999976432211 1111000 00
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++..+.+++.+||+.||++|||+.|++++
T Consensus 233 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 233 ------SIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ------CCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0012235668899999999999999999999986
No 180
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.3e-42 Score=331.20 Aligned_cols=260 Identities=25% Similarity=0.398 Sum_probs=200.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeC--CCc--EEEEEEeecc---cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG--DGM--EVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~ 244 (470)
.++|++.+.||+|+||.||+|++. +++ .||+|++... .....+.+.+|+++++.++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357899999999999999999753 333 6899998654 2345677889999999999999999999998765 7
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
++||||+++++|.+++......+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999999876667899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccc
Q 040392 325 GEDQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVG 402 (470)
Q Consensus 325 ~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (470)
..... .......+|..|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.. ...
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~---~~~----- 242 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILHKIDK---EGE----- 242 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHT---SCC-----
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--HHHHHHc---cCC-----
Confidence 43322 22234557888999999988889999999999999999999 999997643221 1111110 000
Q ss_pred ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 403 ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
....+..++.++.+++.+||..||++||++.+++++|+++...
T Consensus 243 ---------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 243 ---------RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ---------CCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 0001123467799999999999999999999999999998643
No 181
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5.9e-42 Score=332.76 Aligned_cols=263 Identities=20% Similarity=0.277 Sum_probs=201.7
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CCcceeEEeeecc--CCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRNLIKVISTCSN--EEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~--~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|.. .+++.||+|++... ..+.+.+|+++++.++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36789999999999999999975 57899999998743 3456888999999997 9999999999987 6678999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC-CeEEeeeccccccCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM-VAHLSDFSIAKLLTGE 326 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~ 326 (470)
|||+++++|.+++. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||++......
T Consensus 112 ~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 99999999999985 3788999999999999999999 99999999999999999776 8999999999876433
Q ss_pred CCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccc----
Q 040392 327 DQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVV---- 401 (470)
Q Consensus 327 ~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 401 (470)
. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.........+.............+..
T Consensus 185 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 Q---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp C---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred C---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 2 2234568999999999877 6689999999999999999999999965433222221111100000000000
Q ss_pred -----------cccccC--chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 402 -----------GANLLS--QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 402 -----------~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...... ...........++.++.+|+.+||+.||++|||+.|+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000 0000011122357789999999999999999999999875
No 182
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.1e-42 Score=336.36 Aligned_cols=265 Identities=18% Similarity=0.261 Sum_probs=207.1
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchh-----------------hhhHHHHHHHHhcCCCCcceeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRA-----------------LKGFDVECEMMKSIRHRNLIKV 234 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~nIv~~ 234 (470)
.++|.+.+.||+|+||.||+|.. +|+.||+|++....... .+.+.+|+++++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999998 89999999987542211 1778899999999999999999
Q ss_pred EeeeccCCeeeEEEecCCCCChHHh------hhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeeecCCCCCCeee
Q 040392 235 ISTCSNEEFKALVLEYMPHGSLEKY------MYSS-NYILDIFQRLNIMIDVASALEYLHFGYS-APIIHCDLKPSNVLL 306 (470)
Q Consensus 235 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~i~H~dlkp~Nill 306 (470)
++++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.||.||| + .+++||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 6542 467899999999999999999999 7 999999999999999
Q ss_pred CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCC-CCCC-ccchhhHHHHHHHHHhCCCCCCccccCcch
Q 040392 307 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVST-NGDVYSFGIMLMETFTGKKPTNEIFNGEMT 384 (470)
Q Consensus 307 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~-~~DvwslGv~l~el~tg~~p~~~~~~~~~~ 384 (470)
+.++.+||+|||.+...... ......++..|+|||.+.+. .++. ++||||||+++|||++|+.||.........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999875432 33446789999999999877 5666 999999999999999999999864432222
Q ss_pred hhHHhhhhcCCcc--cccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 385 LKHWVNDWLPIST--MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 385 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
............. ..... .... .........++.++.+++.+||+.||++||++.|++++
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLY-PLTN--KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTT-TTCC----------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhccCcCCccchhhhhc-cccc--cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 2111111111000 00000 0000 00011123457789999999999999999999999984
No 183
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.1e-42 Score=328.35 Aligned_cols=251 Identities=23% Similarity=0.277 Sum_probs=189.7
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccc--hhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|++.+.||+|+||.||+|+. .+|+.||+|++..... .....+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46789999999999999999986 4789999999865422 22333445566688889999999999999999999999
Q ss_pred ecCCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 249 EYMPHGSLEKYMYS---SNYILDIFQRLNIMIDVASALEYLHFGYSA-PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 249 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
||+++ +|.+++.. ....+++..+..++.|++.||+||| +. +++||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99974 88777754 4457899999999999999999999 87 99999999999999999999999999998654
Q ss_pred CCCCcccccccccCccccCcccc----CCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccc
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYG----REGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV 400 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~----~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (470)
... ......+|+.|+|||.+ .+..++.++||||||+++|||++|+.||.........+........+..
T Consensus 162 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 234 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---- 234 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC----
T ss_pred ccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCc----
Confidence 322 22334689999999995 5667899999999999999999999999764333222222222111100
Q ss_pred ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
....++.++.+++.+||+.||++|||+.|+++|
T Consensus 235 --------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 235 --------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp --------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --------------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 012336678999999999999999999999984
No 184
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.7e-42 Score=332.12 Aligned_cols=264 Identities=23% Similarity=0.313 Sum_probs=188.8
Q ss_pred HhhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 170 RATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 170 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
...++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3457899999999999999999975 468999999986442 33456778899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccc
Q 040392 248 LEYMPHGSLEKYMYS-------SNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIA 320 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a 320 (470)
|||+++++|.+++.. ....+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999864 2356899999999999999999999 899999999999999999999999999998
Q ss_pred cccCCCCC---cccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc
Q 040392 321 KLLTGEDQ---SMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS 396 (470)
Q Consensus 321 ~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (470)
........ ........+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||........... ......+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~ 247 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML-TLQNDPPSL 247 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-HHTSSCCCT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-HhccCCCcc
Confidence 76543211 112234568999999998865 5689999999999999999999999986543321111 111111100
Q ss_pred ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.....+.. ....++.++.+++.+||+.||++||++.|++++
T Consensus 248 ~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDKE----------MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC-----C----------CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccch----------hhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000000 112346678999999999999999999999974
No 185
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.1e-43 Score=346.07 Aligned_cols=248 Identities=16% Similarity=0.213 Sum_probs=192.5
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc---cchhhhhHHHHH---HHHhcCCCCcceeEE-------ee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ---CGRALKGFDVEC---EMMKSIRHRNLIKVI-------ST 237 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~nIv~~~-------~~ 237 (470)
.++|.+.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+ ++++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46688899999999999999985 56999999999743 334567788999 455556899999998 55
Q ss_pred eccCC-----------------eeeEEEecCCCCChHHhhhcCCC------CCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 040392 238 CSNEE-----------------FKALVLEYMPHGSLEKYMYSSNY------ILDIFQRLNIMIDVASALEYLHFGYSAPI 294 (470)
Q Consensus 238 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i 294 (470)
+...+ ..++||||+ +|+|.+++..... .+++..++.++.|++.||+||| +.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 54442 378999999 6799999976432 2235788899999999999999 8999
Q ss_pred eecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCC-----------CCCCccchhhHHH
Q 040392 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-----------RVSTNGDVYSFGI 363 (470)
Q Consensus 295 ~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-----------~~~~~~DvwslGv 363 (470)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999985321 2234557 999999999877 7999999999999
Q ss_pred HHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHH
Q 040392 364 MLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINARE 443 (470)
Q Consensus 364 ~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e 443 (470)
++|||++|+.||......... . + .. . ....++.++.+++.+||+.||++||++.|
T Consensus 302 il~elltg~~Pf~~~~~~~~~-~-~-----------~~-~-----------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGS-E-W-----------IF-R-----------SCKNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHSSCCC------CCS-G-G-----------GG-S-----------SCCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHCCCCCcccccccch-h-h-----------hh-h-----------hccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 999999999999764322110 0 0 00 0 00233667899999999999999999999
Q ss_pred HHH--HHHHHHHH
Q 040392 444 IVA--KLLKIRDS 454 (470)
Q Consensus 444 l~~--~L~~i~~~ 454 (470)
+++ .++++.+.
T Consensus 357 ~l~hp~f~~~~~~ 369 (377)
T 3byv_A 357 AMETPEYEQLRTE 369 (377)
T ss_dssp HHTSHHHHHHHHH
T ss_pred HhhChHHHHHHHH
Confidence 997 45555443
No 186
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.3e-42 Score=339.83 Aligned_cols=265 Identities=20% Similarity=0.315 Sum_probs=205.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|++.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 357899999999999999999865 68999999997653 3345678899999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA-PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
|+++++|.+++.... .+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999997654 5899999999999999999999 75 8999999999999999999999999998755321
Q ss_pred cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc---------------
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL--------------- 393 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--------------- 393 (470)
......||+.|+|||++.+..++.++||||||+++|||++|+.||......+... ......
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL--MFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHH--HHC------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HhcccccccCCCCCCCcccCC
Confidence 1234578999999999999999999999999999999999999997643221110 000000
Q ss_pred ------------CCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 394 ------------PISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 394 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
+....+..+...... ........++.++.+|+.+||+.||++|||+.|+++|-
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ------------CCCHHHHHHHHHHSC--CCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred CcccccccCCCCcccchhhhhHHhccC--CCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 000000000000000 00001123466799999999999999999999999863
No 187
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.9e-42 Score=335.23 Aligned_cols=268 Identities=24% Similarity=0.317 Sum_probs=202.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+....++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467899999999999999999865 58999999986443 223455778999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
||+++++|.++.... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp ECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 999998888876543 46899999999999999999999 8999999999999999999999999999997654322
Q ss_pred cccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcC-----------Cc
Q 040392 329 SMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP-----------IS 396 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-----------~~ 396 (470)
.......+|+.|+|||.+.+. .++.++||||||+++|+|++|+.||......+. +......... ..
T Consensus 179 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 179 -EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCG
T ss_pred -cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhcc
Confidence 222345689999999998775 689999999999999999999999976433211 1111110000 00
Q ss_pred -ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 397 -TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 397 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
......+..... .........++.++.+++.+||+.||++|||+.|++++
T Consensus 257 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 257 VFAGVRLPEIKER-EPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGTTCCCCCCSSC-CCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccccCcccccc-chhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000001000 01111123457789999999999999999999999976
No 188
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.1e-41 Score=349.15 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=205.8
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
++|.+.+.||+|+||.||+|+.. +|+.||+|++.... ......+..|+++++.++||||+++++++......++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 57888899999999999999875 69999999997542 233456788999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 249 EYMPHGSLEKYMYSSN---YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999987543 46899999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .............
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~~i~~~~~-------- 410 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRVLEQAV-------- 410 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHHHHHHCCC--------
T ss_pred CCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHHHHhhccc--------
Confidence 221 22345799999999999999999999999999999999999999986432211 1111111110000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCH-----HHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINA-----REIVAK 447 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~el~~~ 447 (470)
..+..++.++.+++.+||+.||++||++ .++++|
T Consensus 411 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 411 --------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred --------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 0112346778999999999999999965 667653
No 189
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.2e-42 Score=347.64 Aligned_cols=195 Identities=24% Similarity=0.334 Sum_probs=154.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeecc-----CCe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSN-----EEF 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-----~~~ 243 (470)
.++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+++++.++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 478999999999999999999754 6899999998643 23345678899999999999999999999843 357
Q ss_pred eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
.++||||+. |+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999984 6999998654 46899999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCc-------------------------ccccccccCccccCcccc-CCCCCCCccchhhHHHHHHHHHhC
Q 040392 324 TGEDQS-------------------------MTQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFTG 371 (470)
Q Consensus 324 ~~~~~~-------------------------~~~~~~~~t~~y~aPE~~-~~~~~~~~~DvwslGv~l~el~tg 371 (470)
...... ......+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 422111 123445789999999975 566799999999999999999994
No 190
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.4e-41 Score=326.21 Aligned_cols=250 Identities=24% Similarity=0.366 Sum_probs=207.8
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
.+.|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 35688999999999999999975 468999999997553 3456778899999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 329 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 329 (470)
|+++++|.+++.. ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 9999999999965 35899999999999999999999 8999999999999999999999999999998764322
Q ss_pred ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCch
Q 040392 330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE 409 (470)
Q Consensus 330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (470)
.......+++.|+|||.+.+..++.++||||||+++|+|++|+.||......+ ....+....+..
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~------------- 238 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNNPPT------------- 238 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCC-------------
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCCCCC-------------
Confidence 22334578999999999999999999999999999999999999997643221 111111111100
Q ss_pred hhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 410 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
.+..++..+.+++.+||+.||++|||+.|++++.
T Consensus 239 -----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 239 -----LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp -----CCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred -----CccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 0123356789999999999999999999999864
No 191
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.7e-42 Score=334.97 Aligned_cols=249 Identities=19% Similarity=0.276 Sum_probs=206.1
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|.+.+.||+|+||.||++... +++.||+|++.... ....+.+..|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467899999999999999999865 58899999987542 23456788899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++++|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999986543 6899999999999999999999 8999999999999999999999999999998764222
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
.......+|..|+|||++.+..++.++||||||+++|||++|+.||......+. .........
T Consensus 196 --~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~-------------- 258 (335)
T 2owb_A 196 --ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YLRIKKNEY-------------- 258 (335)
T ss_dssp --CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHTCC--------------
T ss_pred --ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHhcCCC--------------
Confidence 222345689999999999988899999999999999999999999976322111 111111000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+++.+||+.||++||++.|++++
T Consensus 259 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 259 ------SIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0012235668899999999999999999999875
No 192
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.5e-42 Score=351.15 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=203.7
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999865 68999999986432 334567889999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---CCCCeEEeeeccccccCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~a~~~~~ 325 (470)
||+++|+|.+.+.... .+++..+..++.|++.||.||| +.+|+||||||+||+++ .++.+||+|||++.....
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999886654 6899999999999999999999 99999999999999995 566899999999986643
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
. .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+ .+...........
T Consensus 177 ~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~--------- 242 (486)
T 3mwu_A 177 N---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRVETGKYAFD--------- 242 (486)
T ss_dssp C-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCSC---------
T ss_pred C---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCC---------
Confidence 2 22334579999999999875 58999999999999999999999997643221 1111111100000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
......++.++.+++.+||+.||++|||+.|+++|
T Consensus 243 -------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 -------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 01123346778999999999999999999999986
No 193
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.5e-41 Score=332.96 Aligned_cols=271 Identities=21% Similarity=0.282 Sum_probs=203.9
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeecc--------
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSN-------- 240 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-------- 240 (470)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46799999999999999999986 578999999986543 2234567789999999999999999999876
Q ss_pred CCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccc
Q 040392 241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIA 320 (470)
Q Consensus 241 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a 320 (470)
....++||||+++ +|.+.+......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3467899999975 888888777677999999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCC--cccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh--cCC
Q 040392 321 KLLTGEDQ--SMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW--LPI 395 (470)
Q Consensus 321 ~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~ 395 (470)
..+..... ........+|+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ......... .+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITP 250 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCh
Confidence 87643221 222344678999999998876 458999999999999999999999998643221 111111100 000
Q ss_pred cc-cccccccc------c---CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 396 ST-MEVVGANL------L---SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 396 ~~-~~~~~~~~------~---~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.. ........ . .............+..+.+|+.+||+.||++|||+.|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00 00000000 0 00000111111225668899999999999999999999986
No 194
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=8e-42 Score=336.40 Aligned_cols=255 Identities=25% Similarity=0.359 Sum_probs=205.8
Q ss_pred HHhhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccc--------hhhhhHHHHHHHHhcC-CCCcceeEEeee
Q 040392 169 CRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--------RALKGFDVECEMMKSI-RHRNLIKVISTC 238 (470)
Q Consensus 169 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~nIv~~~~~~ 238 (470)
....++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+..|+.+++.+ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344567999999999999999999875 799999999875431 1245677899999999 799999999999
Q ss_pred ccCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeec
Q 040392 239 SNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFS 318 (470)
Q Consensus 239 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg 318 (470)
......++||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecC
Confidence 9999999999999999999999754 36899999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCCcccccccccCccccCccccCC------CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh
Q 040392 319 IAKLLTGEDQSMTQTQTLATIGYMAPEYGRE------GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW 392 (470)
Q Consensus 319 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 392 (470)
++..+.... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...... .....+...
T Consensus 246 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~i~~~ 320 (365)
T 2y7j_A 246 FSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLRMIMEG 320 (365)
T ss_dssp TCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHT
T ss_pred cccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhC
Confidence 998765322 2234679999999998753 35889999999999999999999999753221 111111110
Q ss_pred cCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 393 LPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.. . ........++.++.+++.+||+.||++||++.|++++
T Consensus 321 ~~------------~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 321 QY------------Q---FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CC------------C---CCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CC------------C---CCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 0 0011112346678999999999999999999999875
No 195
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=7e-42 Score=323.60 Aligned_cols=248 Identities=25% Similarity=0.363 Sum_probs=197.2
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467999999999999999999875 79999999987542 23355788899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999997654 5899999999999999999999 8999999999999999999999999999998664322
Q ss_pred CcccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL 406 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (470)
......+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... .....+.....
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~------------ 228 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIRGGVF------------ 228 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC------------
T ss_pred ---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhhcCcc------------
Confidence 2234568999999999987765 68999999999999999999999753221 11111111000
Q ss_pred CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 229 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 -------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0012235678899999999999999999999986
No 196
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.8e-42 Score=333.82 Aligned_cols=252 Identities=25% Similarity=0.326 Sum_probs=200.4
Q ss_pred hhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc-chhhhhHHHHHHH-HhcCCCCcceeEEeeeccCCeeeEE
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC-GRALKGFDVECEM-MKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
..++|++.+.||+|+||.||+|+. .+|+.||||++.... ......+..|..+ ++.++||||+++++++...+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 356788899999999999999986 578999999987542 2334445555555 7788999999999999999999999
Q ss_pred EecCCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 248 LEYMPHGSLEKYMYS---SNYILDIFQRLNIMIDVASALEYLHFGYSA-PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
|||+++ +|.+++.. ....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||++...
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99888864 4467899999999999999999999 76 9999999999999999999999999999866
Q ss_pred CCCCCcccccccccCccccCccccC----CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccc
Q 040392 324 TGEDQSMTQTQTLATIGYMAPEYGR----EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTME 399 (470)
Q Consensus 324 ~~~~~~~~~~~~~~t~~y~aPE~~~----~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (470)
.. ........||+.|+|||++. ...++.++||||||+++|||++|+.||.........+...+....+.
T Consensus 205 ~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---- 277 (340)
T 3an0_A 205 VD---SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ---- 277 (340)
T ss_dssp SC---HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC----
T ss_pred cc---ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCC----
Confidence 32 12223357999999999964 34689999999999999999999999976433222222221111000
Q ss_pred cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 400 VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ....++.++.+++.+||+.||++||++.|++++
T Consensus 278 -----~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 278 -----L---------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp -----C---------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -----C---------CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0 012346778999999999999999999999885
No 197
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.4e-42 Score=361.39 Aligned_cols=252 Identities=24% Similarity=0.375 Sum_probs=201.7
Q ss_pred CeecccCceEEEEEEe---CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecCCC
Q 040392 179 NLIGRGGFGSVYKARL---GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH 253 (470)
Q Consensus 179 ~~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~ 253 (470)
+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|+++++.++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999964 246789999997543 2345678999999999999999999999965 457899999999
Q ss_pred CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC-cccc
Q 040392 254 GSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ-SMTQ 332 (470)
Q Consensus 254 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~ 332 (470)
|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+..... ....
T Consensus 454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999654 46899999999999999999999 89999999999999999999999999999987654322 1222
Q ss_pred cccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhh
Q 040392 333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDI 411 (470)
Q Consensus 333 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (470)
....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ ....+.....
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~i~~~~~----------------- 590 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGER----------------- 590 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTCC-----------------
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCC-----------------
Confidence 33456789999999998899999999999999999998 999997643321 1111111110
Q ss_pred hhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 412 HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 412 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
...+..++.++.+++..||+.||++||++.+|++.|+++..++
T Consensus 591 -~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 591 -MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 0112345778999999999999999999999999999987554
No 198
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.7e-42 Score=326.92 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=203.5
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeee--ccCCeeeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTC--SNEEFKAL 246 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~--~~~~~~~l 246 (470)
.++|++.+.||+|+||.||+|+.. +++.||+|.+.... ....+.+.+|+++++.++||||+++++++ ......++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467899999999999999999865 68999999997542 33456788999999999999999999987 44678899
Q ss_pred EEecCCCCChHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eeecCCCCCCeeeCCCCCeEEeeec
Q 040392 247 VLEYMPHGSLEKYMYSSN---YILDIFQRLNIMIDVASALEYLHFGYSAP-----IIHCDLKPSNVLLDDNMVAHLSDFS 318 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~-----i~H~dlkp~Nill~~~~~~kl~Dfg 318 (470)
||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+ ++||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999997532 35899999999999999999999 777 9999999999999999999999999
Q ss_pred cccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccc
Q 040392 319 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTM 398 (470)
Q Consensus 319 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 398 (470)
++....... .......+++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .+...+......
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~~~~--- 234 (279)
T 2w5a_A 162 LARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREGKFR--- 234 (279)
T ss_dssp HHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCC---
T ss_pred hheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhhcccc---
Confidence 998654321 1223456899999999998888999999999999999999999999764321 111111111000
Q ss_pred ccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHH
Q 040392 399 EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL 449 (470)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~ 449 (470)
..+..++.++.+++.+||+.||++||++.|+++++.
T Consensus 235 ---------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 235 ---------------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp ---------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ---------------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 011234677899999999999999999999998764
No 199
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-42 Score=336.14 Aligned_cols=255 Identities=23% Similarity=0.312 Sum_probs=203.5
Q ss_pred hCCCCCCCeecccCceEEEEEEe----CCCcEEEEEEeeccc----chhhhhHHHHHHHHhcC-CCCcceeEEeeeccCC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL----GDGMEVAVKVFNLQC----GRALKGFDVECEMMKSI-RHRNLIKVISTCSNEE 242 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~ 242 (470)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ......+..|+++++.+ .||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999986 368999999986432 23345567799999999 6999999999999999
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++||||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999997654 5899999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCccccCccccCC--CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccc
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV 400 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (470)
..... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ ............
T Consensus 209 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~---- 282 (355)
T 1vzo_A 209 FVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKSE---- 282 (355)
T ss_dssp CCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHCC----
T ss_pred cccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHhccC----
Confidence 53221 222334579999999999885 3478999999999999999999999975432221 111111110000
Q ss_pred ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCC-----CHHHHHHHH
Q 040392 401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-----NAREIVAKL 448 (470)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~el~~~L 448 (470)
...+..++..+.+++.+||..||++|| ++.|++++.
T Consensus 283 ------------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 ------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp ------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred ------------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 001123466788999999999999999 999999875
No 200
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.4e-41 Score=323.10 Aligned_cols=244 Identities=19% Similarity=0.275 Sum_probs=199.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467899999999999999999875 7999999998754 233456678899999999 899999999999999999999
Q ss_pred EecCCCCChHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC---------------
Q 040392 248 LEYMPHGSLEKYMYSSN---YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDN--------------- 309 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~--------------- 309 (470)
|||+++++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997642 46899999999999999999999 8999999999999999844
Q ss_pred ----CCeEEeeeccccccCCCCCcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcch
Q 040392 310 ----MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT 384 (470)
Q Consensus 310 ----~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~ 384 (470)
..+||+|||.+....... ...+|+.|+|||.+.+. .++.++||||||+++|+|++|..|+... ..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~ 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQ 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HH
T ss_pred cCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hH
Confidence 489999999998764322 23589999999998765 5678999999999999999998776432 11
Q ss_pred hhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 385 LKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.........+ ..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHEIRQGRLP-------------------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHHTTCCC-------------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHHcCCCC-------------------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1111111110 0112346678999999999999999999999875
No 201
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.9e-42 Score=352.56 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=205.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 457899999999999999999865 78999999986542 33456788999999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeeeccccccC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~a~~~~ 324 (470)
|||+.+|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||++..+.
T Consensus 105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999986554 6899999999999999999999 8999999999999999 567899999999998764
Q ss_pred CCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh-cCCcccccccc
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW-LPISTMEVVGA 403 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 403 (470)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||......+ ....+... ...
T Consensus 181 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~~~~~-------- 246 (484)
T 3nyv_A 181 ASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD--ILKKVEKGKYTF-------- 246 (484)
T ss_dssp CCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCCCC--------
T ss_pred ccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHcCCCCC--------
Confidence 322 2334579999999999865 68999999999999999999999997643221 11111110 000
Q ss_pred cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.......++.++.+++.+||+.||++|||+.|+++|
T Consensus 247 --------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 247 --------ELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --------CSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --------CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 001112346778999999999999999999999975
No 202
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.2e-41 Score=340.75 Aligned_cols=263 Identities=18% Similarity=0.205 Sum_probs=212.6
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCC-CcceeEEeeeccCCeeeEEEe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRH-RNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~~~~~~~~~~~~~lv~e 249 (470)
.++|.+.+.||+|+||.||+|+. .+++.||||++.... ....+..|+++++.++| ++|..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 47899999999999999999985 569999999876543 33468889999999987 556666666777888899999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee---CCCCCeEEeeeccccccCCC
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~a~~~~~~ 326 (470)
|+ +++|.+++......+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 88999999876778999999999999999999999 8999999999999999 68899999999999876543
Q ss_pred CCc-----ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcch--hhHHhhhhcCCcccc
Q 040392 327 DQS-----MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT--LKHWVNDWLPISTME 399 (470)
Q Consensus 327 ~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~ 399 (470)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... +...........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~--- 236 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS--- 236 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSC---
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhcccccc---
Confidence 321 1223567999999999999999999999999999999999999999875433211 111111100000
Q ss_pred cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHH
Q 040392 400 VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSL 455 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~ 455 (470)
.......++.++.+++..||+.||++||++.+|++.|+++....
T Consensus 237 ------------~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 237 ------------IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp ------------HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ------------HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 01112345778999999999999999999999999999997643
No 203
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-41 Score=335.41 Aligned_cols=272 Identities=24% Similarity=0.291 Sum_probs=201.7
Q ss_pred HHhhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeecc-------
Q 040392 169 CRATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN------- 240 (470)
Q Consensus 169 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------- 240 (470)
....++|++.+.||+|+||.||+|+. .+|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999975 5799999999864322 23369999999999999999999833
Q ss_pred -------------------------------CCeeeEEEecCCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHH
Q 040392 241 -------------------------------EEFKALVLEYMPHGSLEKYMYS---SNYILDIFQRLNIMIDVASALEYL 286 (470)
Q Consensus 241 -------------------------------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~L 286 (470)
....++||||++ |+|.+.+.. ....+++..+..++.|+++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345789999998 488777653 345789999999999999999999
Q ss_pred hcCCCCCeeecCCCCCCeeeC-CCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCC-CCCCccchhhHHHH
Q 040392 287 HFGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIM 364 (470)
Q Consensus 287 H~~~~~~i~H~dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~ 364 (470)
| +.+|+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||.+.+. .++.++||||+||+
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9 99999999999999997 68999999999998764332 22345689999999988765 48999999999999
Q ss_pred HHHHHhCCCCCCccccCcchhhHHhhhhcCCc----------ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCC
Q 040392 365 LMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS----------TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVES 434 (470)
Q Consensus 365 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d 434 (470)
+|||++|+.||......+ .+...+....... ..+..-+. ..........+..++.++.+|+.+||+.|
T Consensus 232 l~ell~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 232 FGELILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPT-LKAKDWRKILPEGTPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCC-CCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCc-cCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence 999999999998643221 1111111110000 00000000 01111222233446778999999999999
Q ss_pred ccCCCCHHHHHHH--HHHHHH
Q 040392 435 PEQRINAREIVAK--LLKIRD 453 (470)
Q Consensus 435 P~~Rps~~el~~~--L~~i~~ 453 (470)
|++|||+.|+++| ++++++
T Consensus 310 P~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 310 PDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GGGSCCHHHHHTSGGGHHHHH
T ss_pred hhhCCCHHHHhcCHHHHHHHh
Confidence 9999999999964 455544
No 204
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.1e-41 Score=324.15 Aligned_cols=268 Identities=24% Similarity=0.294 Sum_probs=202.9
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e 249 (470)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999865 68999999986543 2334667889999999999999999999999999999999
Q ss_pred cCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 250 YMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
|++ ++|.+++.... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 59999987654 46889999999999999999999 8999999999999999999999999999998764322
Q ss_pred cccccccccCccccCccccCCCC-CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc-CCc-c------cc
Q 040392 329 SMTQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL-PIS-T------ME 399 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~-~------~~ 399 (470)
.......+|+.|+|||.+.+.. ++.++||||||+++|+|++|+.||......+ .......... +.. . ..
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 158 -RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp -BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred -cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcCc
Confidence 2223456899999999987765 7999999999999999999999997643221 1111111110 000 0 00
Q ss_pred cccccccCc-hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 400 VVGANLLSQ-EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 400 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+..... ..........++.++.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000 000001112346778999999999999999999999874
No 205
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=7.3e-42 Score=350.23 Aligned_cols=255 Identities=22% Similarity=0.338 Sum_probs=201.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|++.+.||+|+||.||+|+.. ++..||+|++.... ......+.+|+++++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456999999999999999999865 68999999987542 334567889999999999999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeeeccccccCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~---~~~~kl~Dfg~a~~~~~ 325 (470)
||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||++.....
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999886554 5899999999999999999999 899999999999999976 44599999999987643
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
.. ......||+.|+|||++. ..++.++||||+||++|+|++|+.||......+. +...........
T Consensus 192 ~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~--------- 257 (494)
T 3lij_A 192 QK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI-LRKVEKGKYTFD--------- 257 (494)
T ss_dssp TB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCC---------
T ss_pred Cc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCC---------
Confidence 22 233467999999999886 5699999999999999999999999986433211 111111100000
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH--HHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK--LLKI 451 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~--L~~i 451 (470)
......++.++.+++.+||+.||.+|||+.|+++| ++++
T Consensus 258 -------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 258 -------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp -------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred -------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 00112346678999999999999999999999976 4444
No 206
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.6e-41 Score=348.60 Aligned_cols=252 Identities=22% Similarity=0.329 Sum_probs=202.8
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccc-------------hhhhhHHHHHHHHhcCCCCcceeEEe
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-------------RALKGFDVECEMMKSIRHRNLIKVIS 236 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~nIv~~~~ 236 (470)
..++|.+.+.||+|+||+||+|+.. +++.||+|++..... ...+.+.+|+++++.++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999865 588999999865421 23456888999999999999999999
Q ss_pred eeccCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC---CeE
Q 040392 237 TCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM---VAH 313 (470)
Q Consensus 237 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~---~~k 313 (470)
++.+....++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999986654 5899999999999999999999 89999999999999998776 699
Q ss_pred EeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc
Q 040392 314 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL 393 (470)
Q Consensus 314 l~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (470)
|+|||++...... .......||+.|+|||++. +.++.++||||+||++|+|++|..||......+ +...+...
T Consensus 190 l~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~- 262 (504)
T 3q5i_A 190 IVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD--IIKKVEKG- 262 (504)
T ss_dssp ECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHC-
T ss_pred EEECCCCEEcCCC---CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHcC-
Confidence 9999999876432 2233457999999999987 468999999999999999999999998643221 11111110
Q ss_pred CCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 394 PISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.. .........++.++.+++.+||+.||.+|||+.|+++|
T Consensus 263 --~~------------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 263 --KY------------YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp --CC------------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --CC------------CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 00 00011123456779999999999999999999999875
No 207
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.1e-41 Score=328.49 Aligned_cols=255 Identities=23% Similarity=0.366 Sum_probs=198.9
Q ss_pred HhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCC--CCcceeEEeeeccCCeee
Q 040392 170 RATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIR--HRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 170 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~~~~~ 245 (470)
...++|++.+.||+|+||.||+|...+++.||+|++.... ......+.+|++++++++ |+||+++++++......+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 3456799999999999999999998889999999986542 345577889999999997 599999999999999999
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+||| +.+++|.+++.... .+++..+..++.|+++||.||| +.+++||||||+||+++ ++.+||+|||++.....
T Consensus 105 lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---
T ss_pred EEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEEeeccccccccC
Confidence 9999 55789999997654 6899999999999999999999 89999999999999996 48999999999987654
Q ss_pred CCCcccccccccCccccCccccCC-----------CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcC
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGRE-----------GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLP 394 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (470)
...........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||.........+.........
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 258 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 258 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccc
Confidence 333333345578999999999865 468889999999999999999999997643322222211111100
Q ss_pred CcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
.. .+..++.++.+++.+||+.||++||++.|++++-
T Consensus 259 ~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 259 IE------------------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp CC------------------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cC------------------CcccchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 00 0112255688999999999999999999999863
No 208
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-42 Score=336.52 Aligned_cols=264 Identities=25% Similarity=0.288 Sum_probs=195.8
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC------
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE------ 242 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------ 242 (470)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999986 46999999998543 2334567889999999999999999999987653
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++||||+ +++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 458999999 78999999763 5899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC--cccc
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI--STME 399 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~ 399 (470)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .+.......... ....
T Consensus 178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHH
T ss_pred cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 5322 234578999999998876 679999999999999999999999997643211 111111100000 0000
Q ss_pred cccc--------cccCc-hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 400 VVGA--------NLLSQ-EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 400 ~~~~--------~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.+.. .+... ...........+.++.+|+.+||..||++|||+.|+++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0000 00000 000000112346778999999999999999999999985
No 209
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.5e-42 Score=340.95 Aligned_cols=261 Identities=12% Similarity=0.118 Sum_probs=185.9
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccc---hhhhhHHHHHHHHhcC--CCCcceeEEe-------ee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG---RALKGFDVECEMMKSI--RHRNLIKVIS-------TC 238 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~nIv~~~~-------~~ 238 (470)
..+|...+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+.+++.+ +||||++++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999865 789999999976432 3455667785544444 6999888553 33
Q ss_pred ccC-----------------CeeeEEEecCCCCChHHhhhcCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCee
Q 040392 239 SNE-----------------EFKALVLEYMPHGSLEKYMYSSNYILDIFQR------LNIMIDVASALEYLHFGYSAPII 295 (470)
Q Consensus 239 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~------~~i~~~i~~~L~~LH~~~~~~i~ 295 (470)
... ...++||||++ |+|.+++...+..+++..+ ..++.|++.||+||| +.+|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 221 34799999998 8999999875544555566 778899999999999 99999
Q ss_pred ecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCC--CCCCCccchhhHHHHHHHHHhCCC
Q 040392 296 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLMETFTGKK 373 (470)
Q Consensus 296 H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGv~l~el~tg~~ 373 (470)
||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999986532 1113457799999999987 679999999999999999999999
Q ss_pred CCCccccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH--HHHH
Q 040392 374 PTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK--LLKI 451 (470)
Q Consensus 374 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~--L~~i 451 (470)
||......... .|... ...... ...........++.++.+++.+||+.||++|||+.|+++| ++++
T Consensus 292 Pf~~~~~~~~~--~~~~~----~~~~~~------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 292 PFGLVTPGIKG--SWKRP----SLRVPG------TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp STTBCCTTCTT--CCCBC----CTTSCC------CCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred CCCCcCccccc--chhhh----hhhhcc------ccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 99875332111 00000 000000 0000111112447789999999999999999999999863 4444
Q ss_pred HH
Q 040392 452 RD 453 (470)
Q Consensus 452 ~~ 453 (470)
..
T Consensus 360 ~~ 361 (371)
T 3q60_A 360 QN 361 (371)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 210
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=324.59 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=200.3
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc----chhhhhHHHHHHHHhcCCCCcceeEEeee--ccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC----GRALKGFDVECEMMKSIRHRNLIKVISTC--SNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~~~~~~--~~~~~~ 244 (470)
.++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 478999999999999999999864 68999999986542 23456788999999999999999999998 455688
Q ss_pred eEEEecCCCCChHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 245 ALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
++||||++++ |.+++... ...+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 77776543 356899999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCcccccccccCccccCccccCCCC--CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccc
Q 040392 324 TGEDQSMTQTQTLATIGYMAPEYGREGR--VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVV 401 (470)
Q Consensus 324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (470)
.............+|+.|+|||++.+.. ++.++||||||+++|||++|+.||...... .....+... .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~---~----- 229 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLFENIGKG---S----- 229 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHC---C-----
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHHhcC---C-----
Confidence 5433333444567899999999987644 477999999999999999999999753211 111111100 0
Q ss_pred cccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+..++..+.+++.+||+.||++|||+.|++++
T Consensus 230 -----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 -----------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00112346678899999999999999999999976
No 211
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-41 Score=329.88 Aligned_cols=256 Identities=20% Similarity=0.237 Sum_probs=203.3
Q ss_pred HHhhCCCCCC-CeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCC-CCcceeEEeeeccCCe
Q 040392 169 CRATDGFSEN-NLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIR-HRNLIKVISTCSNEEF 243 (470)
Q Consensus 169 ~~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~ 243 (470)
....++|.+. +.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++.+. ||||+++++++.+...
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3445667777 88999999999999765 68999999987542 233567888999999995 6999999999999999
Q ss_pred eeEEEecCCCCChHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeeecc
Q 040392 244 KALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSI 319 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~---~~~~kl~Dfg~ 319 (470)
.++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 99999999999999998654 356899999999999999999999 899999999999999988 78999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccc
Q 040392 320 AKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTME 399 (470)
Q Consensus 320 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (470)
+....... ......+|+.|+|||++.+..++.++||||||+++|||++|+.||......+. ............
T Consensus 181 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~--- 253 (327)
T 3lm5_A 181 SRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YLNISQVNVDYS--- 253 (327)
T ss_dssp CEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHTCCCCC---
T ss_pred ccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHHHHhcccccC---
Confidence 98764322 22345799999999999999999999999999999999999999976432211 111111000000
Q ss_pred cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 400 VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
......++..+.+++.+||+.||++|||+.|++++
T Consensus 254 -------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 254 -------------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp -------------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -------------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 00112346678999999999999999999999876
No 212
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.8e-42 Score=331.32 Aligned_cols=256 Identities=23% Similarity=0.332 Sum_probs=199.0
Q ss_pred HHHHhhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcC-CCCcceeEEeeecc----
Q 040392 167 ELCRATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSI-RHRNLIKVISTCSN---- 240 (470)
Q Consensus 167 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~---- 240 (470)
++....++|++.+.||+|+||.||+|+. .+|+.||+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 3344578899999999999999999986 468999999987543 3456788899999999 79999999999865
Q ss_pred --CCeeeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeee
Q 040392 241 --EEFKALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDF 317 (470)
Q Consensus 241 --~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Df 317 (470)
....++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+||
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Df 173 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDF 173 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeC
Confidence 467899999999999999997643 46899999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccC-----CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh
Q 040392 318 SIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW 392 (470)
Q Consensus 318 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 392 (470)
|++...... ........+++.|+|||++. +..++.++||||||+++|+|++|+.||........ ...+...
T Consensus 174 g~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~ 249 (326)
T 2x7f_A 174 GVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA--LFLIPRN 249 (326)
T ss_dssp TTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHS
T ss_pred cCceecCcC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--HHHhhcC
Confidence 998765322 11223456899999999986 56689999999999999999999999975432111 1111110
Q ss_pred cCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 393 LPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.. +.. ....++..+.+++.+||..||++||++.|++++
T Consensus 250 ~~--------~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 250 PA--------PRL---------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp CC--------CCC---------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred cc--------ccC---------CccccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 000 012235678999999999999999999999885
No 213
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.6e-41 Score=331.86 Aligned_cols=262 Identities=22% Similarity=0.219 Sum_probs=193.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC------
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE------ 242 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------ 242 (470)
.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999754 6899999998753 2334566788999999999999999999987654
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++||||+++ +|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 77999999975 78888852 4789999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC-------
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI------- 395 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~------- 395 (470)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+...+......
T Consensus 177 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHHTT
T ss_pred cccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHH
Confidence 5322 22334578999999999999899999999999999999999999997643211 111111000000
Q ss_pred ------------c------ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 396 ------------S------TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 396 ------------~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ........... .........+.++.+|+.+||..||++|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFP---ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSC---CSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCc---ccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0 00000000000 0001122346789999999999999999999999986
No 214
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=333.78 Aligned_cols=263 Identities=22% Similarity=0.313 Sum_probs=203.0
Q ss_pred HhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 170 RATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 170 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
...++|++.+.||+|+||.||+|+..+ .+|+|++.... ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345789999999999999999998853 49999986542 33456677899999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++++|.+++......+++..+..++.|++.||+||| +.+++||||||+||+++ ++.+||+|||++.......
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 9999999999999877767899999999999999999999 89999999999999998 6899999999987543211
Q ss_pred ---CcccccccccCccccCccccCC---------CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC
Q 040392 328 ---QSMTQTQTLATIGYMAPEYGRE---------GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI 395 (470)
Q Consensus 328 ---~~~~~~~~~~t~~y~aPE~~~~---------~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (470)
.........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||........ ...+......
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~~~~~~~~~ 261 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI--IWQMGTGMKP 261 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH--HHHHHTTCCC
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHhccCCCC
Confidence 1122234468999999998864 3478899999999999999999999976432211 1111110000
Q ss_pred cccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhh
Q 040392 396 STMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLR 457 (470)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~ 457 (470)
... ...++.++.+++.+||..||++|||+.++++.|+++.....+
T Consensus 262 --------~~~---------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 262 --------NLS---------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp --------CCC---------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred --------CCC---------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 000 012345688999999999999999999999999999765433
No 215
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.8e-41 Score=325.27 Aligned_cols=252 Identities=24% Similarity=0.293 Sum_probs=198.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--------chhhhhHHHHHHHHhcCCCCcceeEEeeeccCC
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--------GRALKGFDVECEMMKSIRHRNLIKVISTCSNEE 242 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~ 242 (470)
.++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|+++++.++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467999999999999999999764 58899999986432 123446788999999999999999999987665
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEeeecc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV---AHLSDFSI 319 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~---~kl~Dfg~ 319 (470)
.++||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 78999999999999998654 46899999999999999999999 899999999999999987664 99999999
Q ss_pred ccccCCCCCcccccccccCccccCcccc---CCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc
Q 040392 320 AKLLTGEDQSMTQTQTLATIGYMAPEYG---REGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS 396 (470)
Q Consensus 320 a~~~~~~~~~~~~~~~~~t~~y~aPE~~---~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (470)
+...... .......||+.|+|||++ ....++.++||||||+++|+|++|+.||........ +...+......
T Consensus 164 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~- 238 (322)
T 2ycf_A 164 SKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQITSGKYN- 238 (322)
T ss_dssp CEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHHHTCCC-
T ss_pred ceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHHhCccc-
Confidence 9865321 122345689999999986 356789999999999999999999999976433322 22211111000
Q ss_pred ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
........++.++.+++.+||+.||++||++.|++++
T Consensus 239 --------------~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 239 --------------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp --------------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --------------cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 0001123346778999999999999999999999864
No 216
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.6e-41 Score=323.29 Aligned_cols=253 Identities=24% Similarity=0.331 Sum_probs=204.4
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---------chhhhhHHHHHHHHhcCC-CCcceeEEeeec
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---------GRALKGFDVECEMMKSIR-HRNLIKVISTCS 239 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~ 239 (470)
..++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3578999999999999999999865 68999999987542 123456778999999996 999999999999
Q ss_pred cCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecc
Q 040392 240 NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSI 319 (470)
Q Consensus 240 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~ 319 (470)
.....++||||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999764 36899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCccccCccccC------CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc
Q 040392 320 AKLLTGEDQSMTQTQTLATIGYMAPEYGR------EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL 393 (470)
Q Consensus 320 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~------~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (470)
+....... ......+++.|+|||++. ...++.++||||||+++|||++|+.||......+ ..........
T Consensus 171 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~ 246 (298)
T 1phk_A 171 SCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-MLRMIMSGNY 246 (298)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCC
T ss_pred hhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH-HHHHHhcCCc
Confidence 98764322 223456899999999874 4568899999999999999999999987532211 1111111000
Q ss_pred CCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 394 PISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
... ......++.++.+++.+||+.||++|||+.|++++
T Consensus 247 ~~~----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 247 QFG----------------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp CCC----------------TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred ccC----------------cccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 000 00112346779999999999999999999999863
No 217
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.4e-41 Score=357.32 Aligned_cols=250 Identities=21% Similarity=0.253 Sum_probs=205.8
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecc---cchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeee
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ---CGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~ 245 (470)
..++|++.+.||+|+||.||+|+.. +++.||||++... .......+..|..++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568999999999999999999864 5889999999754 233456677899999988 6999999999999999999
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999997654 5899999999999999999999 99999999999999999999999999999986432
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL 405 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (470)
.. ......+||+.|+|||++.+..++.++||||||+++|||++|+.||......+ +.. .......
T Consensus 495 ~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~--~~~---~i~~~~~-------- 559 (674)
T 3pfq_A 495 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LFQ---SIMEHNV-------- 559 (674)
T ss_dssp TT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH---HHHSSCC--------
T ss_pred CC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH--HHH---HHHhCCC--------
Confidence 22 22345679999999999999999999999999999999999999997643221 111 1111100
Q ss_pred cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCH-----HHHHHH
Q 040392 406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINA-----REIVAK 447 (470)
Q Consensus 406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~el~~~ 447 (470)
..+..++.++.+|+.+||+.||++||++ .||++|
T Consensus 560 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 560 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred --------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 0112346778999999999999999997 777654
No 218
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=326.79 Aligned_cols=268 Identities=21% Similarity=0.283 Sum_probs=197.1
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeec-----------
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS----------- 239 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~----------- 239 (470)
.++|.+.+.||+|+||.||+|... +++.||+|++........+.+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467999999999999999999875 48999999998766666778899999999999999999998873
Q ss_pred ---cCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCCeEEe
Q 040392 240 ---NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD-DNMVAHLS 315 (470)
Q Consensus 240 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~-~~~~~kl~ 315 (470)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+||| +.+++||||||+||+++ .++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 599999964 35889999999999999999999 89999999999999997 57799999
Q ss_pred eeccccccCCCCC-cccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc
Q 040392 316 DFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL 393 (470)
Q Consensus 316 Dfg~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (470)
|||++........ ........++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+ ........ .
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~-~ 241 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILES-I 241 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH-S
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh-c
Confidence 9999986643211 122234567899999998765 678999999999999999999999998643221 11111111 0
Q ss_pred CCccc-----------ccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 394 PISTM-----------EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 394 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
+.... ....................++.++.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000 0000000000000011123457789999999999999999999999875
No 219
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.1e-41 Score=331.43 Aligned_cols=268 Identities=22% Similarity=0.249 Sum_probs=202.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccC-----Cee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNE-----EFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~ 244 (470)
.++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|+++++.++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 568999999999999999999764 68899999987433 33456788999999999999999999998654 467
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999997 5999998664 4899999999999999999999 9999999999999999999999999999998664
Q ss_pred CCCC-cccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccc
Q 040392 325 GEDQ-SMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVG 402 (470)
Q Consensus 325 ~~~~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (470)
.... ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||......+ .+........... .+...
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~-~~~~~ 257 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPS-QEDLN 257 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCC-HHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCC-HHHHH
Confidence 3221 112234579999999998654 458999999999999999999999997643222 1111111100000 00000
Q ss_pred c-----------cc-cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 403 A-----------NL-LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 403 ~-----------~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. .. .............++.++.+|+.+||+.||++|||+.|+++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00 000000011112346778999999999999999999999875
No 220
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.9e-41 Score=357.09 Aligned_cols=259 Identities=23% Similarity=0.382 Sum_probs=207.7
Q ss_pred hhCCCCCCCeecccCceEEEEEEeCC----CcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeee
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA 245 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~ 245 (470)
..++|++.+.||+|+||.||+|.+.. +..||+|.+.... ....+.+.+|+.+++.++||||+++++++.+ +..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceE
Confidence 34567788899999999999998642 4679999986543 3345678899999999999999999999854 5678
Q ss_pred EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392 246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 325 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~ 325 (470)
+||||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 999999999999999877777999999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392 326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN 404 (470)
Q Consensus 326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (470)
.. ........+|+.|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+......
T Consensus 544 ~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~i~~~~~~--------- 611 (656)
T 2j0j_A 544 ST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENGERL--------- 611 (656)
T ss_dssp -----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHHTCCC---------
T ss_pred Cc-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCCCC---------
Confidence 22 222234457789999999988899999999999999999997 999987643221 11111111000
Q ss_pred ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
..+..++..+.+++.+||..||++||++.|+++.|+++.+.
T Consensus 612 ---------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 612 ---------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 11234567899999999999999999999999999998654
No 221
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.8e-41 Score=336.22 Aligned_cols=266 Identities=21% Similarity=0.224 Sum_probs=200.5
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCC--------CCcceeEEeeec---
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR--------HRNLIKVISTCS--- 239 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~nIv~~~~~~~--- 239 (470)
.++|++.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46799999999999999999975 46889999998643 334566788999999985 788999999987
Q ss_pred -cCCeeeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCC------
Q 040392 240 -NEEFKALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSA-PIIHCDLKPSNVLLDDNM------ 310 (470)
Q Consensus 240 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dlkp~Nill~~~~------ 310 (470)
.....++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 567889999999 556666655443 56899999999999999999999 87 999999999999999776
Q ss_pred -------------------------------------------CeEEeeeccccccCCCCCcccccccccCccccCcccc
Q 040392 311 -------------------------------------------VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG 347 (470)
Q Consensus 311 -------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~ 347 (470)
.+||+|||++...... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 8999999999865422 2345689999999999
Q ss_pred CCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcch-----hhHHhhhhcCCc---------ccccc----------cc
Q 040392 348 REGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT-----LKHWVNDWLPIS---------TMEVV----------GA 403 (470)
Q Consensus 348 ~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~---------~~~~~----------~~ 403 (470)
.+..++.++|||||||++|||++|+.||......+.. +........... ..... +.
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 9989999999999999999999999999864432211 000000000000 00000 00
Q ss_pred cccC---chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 404 NLLS---QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 404 ~~~~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.... ........+...+.++.+|+.+||+.||++|||+.|+++|
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0000 0000011123457789999999999999999999999875
No 222
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8.2e-41 Score=336.02 Aligned_cols=265 Identities=20% Similarity=0.251 Sum_probs=202.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcC------CCCcceeEEeeeccCCee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSI------RHRNLIKVISTCSNEEFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~nIv~~~~~~~~~~~~ 244 (470)
..+|++.+.||+|+||.||+|... +++.||||++... ......+..|+++++.+ .|+||+++++++......
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 467999999999999999999764 5899999999743 23345667788888777 577999999999999999
Q ss_pred eEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC--eEEeeecccc
Q 040392 245 ALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV--AHLSDFSIAK 321 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~--~kl~Dfg~a~ 321 (470)
++||||+. ++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||++.
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 59999987655 45899999999999999999999 899999999999999999887 9999999997
Q ss_pred ccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc-CCc-c--
Q 040392 322 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL-PIS-T-- 397 (470)
Q Consensus 322 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~-~-- 397 (470)
..... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+........ +.. .
T Consensus 251 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~-~l~~i~~~~~~p~~~~~~ 324 (429)
T 3kvw_A 251 YEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD-QLACMIELLGMPSQKLLD 324 (429)
T ss_dssp ETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHH
T ss_pred ecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHH
Confidence 64322 223578999999999999999999999999999999999999997643221 1111111000 000 0
Q ss_pred -----ccccccc---------------------------cc---CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHH
Q 040392 398 -----MEVVGAN---------------------------LL---SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAR 442 (470)
Q Consensus 398 -----~~~~~~~---------------------------~~---~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 442 (470)
...++.. .. .........+...+.++.+|+.+||+.||++|||+.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~ 404 (429)
T 3kvw_A 325 ASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG 404 (429)
T ss_dssp TBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHH
Confidence 0000000 00 000001111123356789999999999999999999
Q ss_pred HHHHH
Q 040392 443 EIVAK 447 (470)
Q Consensus 443 el~~~ 447 (470)
|+++|
T Consensus 405 e~L~H 409 (429)
T 3kvw_A 405 QALRH 409 (429)
T ss_dssp HHHTS
T ss_pred HHhCC
Confidence 99985
No 223
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.5e-41 Score=322.06 Aligned_cols=253 Identities=24% Similarity=0.341 Sum_probs=194.2
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeecc----------
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN---------- 240 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~---------- 240 (470)
.++|++.+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|+++++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 467899999999999999999864 7999999998643 3445678899999999999999999998754
Q ss_pred ---CCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeee
Q 040392 241 ---EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDF 317 (470)
Q Consensus 241 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Df 317 (470)
....++||||+++|+|.+++......+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 45778999999999999999877777889999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCC------------cccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcch
Q 040392 318 SIAKLLTGEDQ------------SMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMT 384 (470)
Q Consensus 318 g~a~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~ 384 (470)
|++........ ........+|+.|+|||.+.+. .++.++||||||+++|||++ ||.......
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~-- 235 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV-- 235 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH--
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH--
Confidence 99986542210 1122345689999999998764 68999999999999999998 554321111
Q ss_pred hhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 385 LKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
........... . ..+. .+..++..+.+++.+||+.||.+|||+.|++++
T Consensus 236 --~~~~~~~~~~~-~-~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 236 --NILKKLRSVSI-E-FPPD----------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp --HHHHHHHSTTC-C-CCTT----------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred --HHHHhcccccc-c-cCcc----------ccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 11111100000 0 0000 112335668899999999999999999999975
No 224
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.2e-40 Score=322.76 Aligned_cols=269 Identities=23% Similarity=0.311 Sum_probs=203.4
Q ss_pred hhCCCCCCCeecccCceEEEEEEe--CCCcEEEEEEeecccc--hhhhhHHHHHHHHhcC---CCCcceeEEeeec----
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARL--GDGMEVAVKVFNLQCG--RALKGFDVECEMMKSI---RHRNLIKVISTCS---- 239 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~nIv~~~~~~~---- 239 (470)
..++|++.+.||+|+||.||+|+. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 4688999999865432 2334567788877766 8999999999986
Q ss_pred -cCCeeeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeee
Q 040392 240 -NEEFKALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDF 317 (470)
Q Consensus 240 -~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Df 317 (470)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5667899999998 59999997654 45899999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcc
Q 040392 318 SIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIST 397 (470)
Q Consensus 318 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (470)
|++..... ........+|..|+|||.+.+..++.++||||||+++|||++|+.||....... .+............
T Consensus 165 g~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCG
T ss_pred cccccccC---CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCc
Confidence 99976532 222344678999999999999899999999999999999999999998643221 11111111000000
Q ss_pred ccc------ccccccC-chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 398 MEV------VGANLLS-QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 398 ~~~------~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
... ....... ...........++..+.+++.+||+.||++||++.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000 0000000 0000011123456778999999999999999999999864
No 225
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.8e-41 Score=333.77 Aligned_cols=263 Identities=24% Similarity=0.272 Sum_probs=184.8
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccC------C
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNE------E 242 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~ 242 (470)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 57899999999999999999975 46899999998643 233456778899999999999999999998653 5
Q ss_pred eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++|+|++ +++|.+++.. ..+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 678999999 6799998865 35899999999999999999999 99999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccc
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVV 401 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (470)
.... .....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+....... .....+..
T Consensus 182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~-g~p~~~~~ 254 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLV-GTPGAELL 254 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHH-CSCCHHHH
T ss_pred cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh-CCCCHHHH
Confidence 5321 234578999999999876 67899999999999999999999999764321 1111111110 00000000
Q ss_pred c-----------ccccCchhh-hhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 402 G-----------ANLLSQEDI-HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 402 ~-----------~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ..+...... ........+.++.+|+.+||..||++|||+.|+++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 000000000 000112346778999999999999999999999986
No 226
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=6.6e-41 Score=328.46 Aligned_cols=269 Identities=22% Similarity=0.254 Sum_probs=201.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccC-----Cee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNE-----EFK 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~-----~~~ 244 (470)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 568999999999999999999865 68999999986433 33455678899999999999999999987654 678
Q ss_pred eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392 245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 324 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~ 324 (470)
++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5999998764 5899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCcc--------cccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc-C
Q 040392 325 GEDQSM--------TQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL-P 394 (470)
Q Consensus 325 ~~~~~~--------~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~ 394 (470)
...... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... .+........ +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 242 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGTP 242 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Confidence 322111 1223468999999998654 678999999999999999999999998643211 1111111000 0
Q ss_pred C--ccccccc-c-------ccc-CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 395 I--STMEVVG-A-------NLL-SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 395 ~--~~~~~~~-~-------~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. ....... . .+. ............++.++.+++.+||+.||++|||+.|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 0000000 0 000 00000011123457789999999999999999999999875
No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.7e-41 Score=332.33 Aligned_cols=264 Identities=25% Similarity=0.299 Sum_probs=195.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccC------Ceee
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNE------EFKA 245 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~------~~~~ 245 (470)
..+|.+.+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++... ...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 356899999999999999999987777799998864322 223699999999999999999998433 3478
Q ss_pred EEEecCCCCChHHhh--hcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCCeEEeeeccccc
Q 040392 246 LVLEYMPHGSLEKYM--YSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD-DNMVAHLSDFSIAKL 322 (470)
Q Consensus 246 lv~e~~~~g~L~~~l--~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~-~~~~~kl~Dfg~a~~ 322 (470)
+||||++++.+.... ......+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999875433322 123456899999999999999999999 89999999999999998 799999999999987
Q ss_pred cCCCCCcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc-----
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS----- 396 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----- 396 (470)
..... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+...+.......
T Consensus 192 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 192 LIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp CCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHH
T ss_pred ccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 64322 22345689999999988764 5899999999999999999999999864321 11111111100000
Q ss_pred -----ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 397 -----TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 397 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..-+. ..........+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus 268 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 268 TMNPNYMEHKFPQ-IRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHCGGGSSSCCCC-CCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hhChhhhhhcccc-ccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00000000 000111111223356789999999999999999999999986
No 228
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=8.1e-41 Score=318.28 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=203.3
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+....++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4568999999999999999999875 68999999986543 23456788999999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC---CCeEEeeeccccccC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLT 324 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~---~~~kl~Dfg~a~~~~ 324 (470)
|||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||||+||+++.+ +.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999999886554 5899999999999999999999 8999999999999999754 479999999998664
Q ss_pred CCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh-cCCcccccccc
Q 040392 325 GEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW-LPISTMEVVGA 403 (470)
Q Consensus 325 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 403 (470)
... ......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... .....+... ....
T Consensus 176 ~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~------- 242 (287)
T 2wei_A 176 QNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYAFD------- 242 (287)
T ss_dssp CCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCCC-------
T ss_pred CCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCCC-------
Confidence 322 1223458899999998875 4899999999999999999999999764221 111111110 0000
Q ss_pred cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
......++.++.+++.+||+.||++|||+.|++++
T Consensus 243 ---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 243 ---------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp ---------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 01112346778999999999999999999999985
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=7.6e-41 Score=330.27 Aligned_cols=263 Identities=21% Similarity=0.246 Sum_probs=198.0
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee----
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK---- 244 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~---- 244 (470)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999754 68999999987542 33456788899999999999999999999876654
Q ss_pred --eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 245 --ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 245 --~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
++||||+. ++|.+++. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 89999997 58888874 24899999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc--ccc
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS--TME 399 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 399 (470)
.... .....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||......+ .+........... ...
T Consensus 194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHT
T ss_pred cccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHH
Confidence 5322 234568999999999877 679999999999999999999999997643211 1111111000000 000
Q ss_pred cccc--------ccc-CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 400 VVGA--------NLL-SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 400 ~~~~--------~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.... ... ............++.++.+|+.+||+.||++|||+.|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0000 000 00000011123457789999999999999999999999876
No 230
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.1e-40 Score=332.25 Aligned_cols=262 Identities=24% Similarity=0.303 Sum_probs=194.8
Q ss_pred CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeecc------CCeee
Q 040392 173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN------EEFKA 245 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------~~~~~ 245 (470)
.+|++.+.||+|+||.||+|++. +|+.||||++.... ....+|+++++.++||||+++++++.. ..+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999875 58999999986432 223469999999999999999998743 23467
Q ss_pred EEEecCCCCChHHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-CCeEEeeecccc
Q 040392 246 LVLEYMPHGSLEKYMY---SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDN-MVAHLSDFSIAK 321 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~-~~~kl~Dfg~a~ 321 (470)
+||||+++ +|.+.+. .....+++..+..++.|+++||+||| +.+|+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999986 6666654 23457899999999999999999999 9999999999999999965 578999999998
Q ss_pred ccCCCCCcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC-----
Q 040392 322 LLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI----- 395 (470)
Q Consensus 322 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----- 395 (470)
.+..... .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+...+......
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 7643222 2345789999999998764 7999999999999999999999999764321 1222222111000
Q ss_pred -----cccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 396 -----STMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 396 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
...+...+... ........+...+.++.+|+.+||..||++||++.|+++|
T Consensus 282 ~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIK-AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHCSCCCCCCCCCCC-CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccCccC-CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 00000000000 0000111122346789999999999999999999999875
No 231
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=4.5e-40 Score=323.36 Aligned_cols=275 Identities=20% Similarity=0.260 Sum_probs=192.9
Q ss_pred HHHHHhhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC--
Q 040392 166 LELCRATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE-- 242 (470)
Q Consensus 166 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~-- 242 (470)
.......++|++.+.||+|+||.||+|+.. +|+.||||++... .........|++.++.++||||+++++++....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667789999999999999999999864 6899999998643 233455677888889999999999999985432
Q ss_pred -----eeeEEEecCCCCChHHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-CCCeE
Q 040392 243 -----FKALVLEYMPHGSLEKYMY---SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD-NMVAH 313 (470)
Q Consensus 243 -----~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~-~~~~k 313 (470)
..++||||+++ +|.+.+. .....+++..+..++.|++.||.|||. ++.+|+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL-PSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTS-TTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhC-CCCCeecCcCCHHHEEEeCCCCcEE
Confidence 37899999986 5554443 244568899999999999999999993 3689999999999999996 89999
Q ss_pred EeeeccccccCCCCCcccccccccCccccCccccCCCC-CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh
Q 040392 314 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW 392 (470)
Q Consensus 314 l~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 392 (470)
|+|||++....... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... ..+.......
T Consensus 173 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~ 248 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVL 248 (360)
T ss_dssp ECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred EeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHc
Confidence 99999998764322 223456899999999886654 899999999999999999999999864322 1222222111
Q ss_pred c-----------CCc-ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 393 L-----------PIS-TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 393 ~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. +.. .....+.................+.++.+|+.+||+.||++|||+.|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 000 000000000000000011112247789999999999999999999999976
No 232
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.6e-40 Score=323.44 Aligned_cols=265 Identities=20% Similarity=0.273 Sum_probs=203.1
Q ss_pred hCCCCCCCeecccCceEEEEEEe--CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCc------ceeEEeeeccCCe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL--GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN------LIKVISTCSNEEF 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~~~~~~~~~~~ 243 (470)
.++|++.+.||+|+||.||+|.. .+++.||||++... ....+.+..|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999976 36889999998643 334566788999999887654 9999999999999
Q ss_pred eeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC--------------
Q 040392 244 KALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD-------------- 308 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~-------------- 308 (470)
.++||||+ +++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999997655 36889999999999999999999 899999999999999987
Q ss_pred -----CCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcc
Q 040392 309 -----NMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEM 383 (470)
Q Consensus 309 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~ 383 (470)
++.+||+|||++...... .....+|+.|+|||++.+..++.++||||||+++|||++|+.||......+
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 241 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE- 241 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-
T ss_pred cccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-
Confidence 678999999999864322 234568999999999999899999999999999999999999997643221
Q ss_pred hhhHHhhhhcCCc--ccc------ccc-ccc----c-----------CchhhhhHhhhhhHHHHHHHHhhccCCCccCCC
Q 040392 384 TLKHWVNDWLPIS--TME------VVG-ANL----L-----------SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRI 439 (470)
Q Consensus 384 ~~~~~~~~~~~~~--~~~------~~~-~~~----~-----------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 439 (470)
..........+.. ... ... ... . ............++.++.+++.+||+.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 1111111000000 000 000 000 0 000000011223467899999999999999999
Q ss_pred CHHHHHHH
Q 040392 440 NAREIVAK 447 (470)
Q Consensus 440 s~~el~~~ 447 (470)
|+.|++++
T Consensus 322 t~~ell~h 329 (339)
T 1z57_A 322 TLREALKH 329 (339)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999875
No 233
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.7e-40 Score=322.19 Aligned_cols=254 Identities=25% Similarity=0.305 Sum_probs=179.5
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHH-HHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECE-MMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ......+..|.. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467899999999999999999874 68999999997543 223344555555 777889999999999999999999999
Q ss_pred ecCCCCChHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 249 EYMPHGSLEKYMYS----SNYILDIFQRLNIMIDVASALEYLHFGYSA-PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 249 e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
||+++ +|.+++.. ....+++..+..++.|++.||.||| +. +++||||||+||+++.++.+||+|||++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99985 88777753 2456899999999999999999999 77 9999999999999999999999999999865
Q ss_pred CCCCCcccccccccCccccCcccc----CCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccc
Q 040392 324 TGEDQSMTQTQTLATIGYMAPEYG----REGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTME 399 (470)
Q Consensus 324 ~~~~~~~~~~~~~~t~~y~aPE~~----~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (470)
.... ......||+.|+|||.+ .+..++.++||||||+++|||++|+.||.........+.... ...
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~----~~~--- 246 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV----KGD--- 246 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC----CSC---
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh----cCC---
Confidence 4321 22334689999999998 456689999999999999999999999976322111111000 000
Q ss_pred cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 400 VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.+.+.. .....++.++.+++.+||+.||++||++.|++++
T Consensus 247 --~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 247 --PPQLSN------SEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp --CCCCCC------CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --CCCCCC------cccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 000000 0112346678999999999999999999999875
No 234
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=329.20 Aligned_cols=269 Identities=21% Similarity=0.278 Sum_probs=183.6
Q ss_pred CCCCC-CCeecccCceEEEEEEeC---CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeee--ccCCeeeE
Q 040392 173 DGFSE-NNLIGRGGFGSVYKARLG---DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTC--SNEEFKAL 246 (470)
Q Consensus 173 ~~~~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~--~~~~~~~l 246 (470)
+.|++ .++||+|+||.||+|+.. +++.||+|++.... ....+.+|+++++.++||||+++++++ ......++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 34655 458999999999999865 57889999986432 234678899999999999999999998 45778899
Q ss_pred EEecCCCCChHHhhhcCC--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----CCCCCeEE
Q 040392 247 VLEYMPHGSLEKYMYSSN--------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL----DDNMVAHL 314 (470)
Q Consensus 247 v~e~~~~g~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill----~~~~~~kl 314 (470)
||||+++ +|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 9999975 8888775321 24899999999999999999999 8999999999999999 77899999
Q ss_pred eeeccccccCCCCC-cccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCc--------ch
Q 040392 315 SDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE--------MT 384 (470)
Q Consensus 315 ~Dfg~a~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~--------~~ 384 (470)
+|||+++....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ..
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 253 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 253 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence 99999987643221 1223456789999999998874 58999999999999999999999997533210 01
Q ss_pred hhHHhhhhc-CC-cccccc-------------cccccCc-hhhhh--HhhhhhHHHHHHHHhhccCCCccCCCCHHHHHH
Q 040392 385 LKHWVNDWL-PI-STMEVV-------------GANLLSQ-EDIHF--VAKEQCVSCVFNLAMECTVESPEQRINAREIVA 446 (470)
Q Consensus 385 ~~~~~~~~~-~~-~~~~~~-------------~~~~~~~-~~~~~--~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~ 446 (470)
+........ +. .....+ ....... ..... ......+.++.+|+.+||..||++|||+.|+++
T Consensus 254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 111111000 00 000000 0000000 00000 000111456889999999999999999999998
Q ss_pred H
Q 040392 447 K 447 (470)
Q Consensus 447 ~ 447 (470)
|
T Consensus 334 h 334 (405)
T 3rgf_A 334 D 334 (405)
T ss_dssp S
T ss_pred C
Confidence 6
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.7e-40 Score=323.33 Aligned_cols=253 Identities=19% Similarity=0.246 Sum_probs=174.8
Q ss_pred hCCCCCCC-eecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeecc----CCeee
Q 040392 172 TDGFSENN-LIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN----EEFKA 245 (470)
Q Consensus 172 ~~~~~~~~-~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~ 245 (470)
.++|.+.+ .||+|+||.||+|+.. +|+.||||++.... .........++.++||||+++++++.. ....+
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 56788855 6999999999999865 69999999986431 122233344667799999999999865 45688
Q ss_pred EEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeeecccc
Q 040392 246 LVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIAK 321 (470)
Q Consensus 246 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~---~~~~kl~Dfg~a~ 321 (470)
+||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||++.
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 9999999999999997654 46899999999999999999999 899999999999999976 4559999999998
Q ss_pred ccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccc
Q 040392 322 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVV 401 (470)
Q Consensus 322 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (470)
..... ......+|+.|+|||++.+..++.++||||||+++|+|++|+.||........... ..... ......
T Consensus 180 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~-~~~~~~-- 251 (336)
T 3fhr_A 180 ETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-MKRRI-RLGQYG-- 251 (336)
T ss_dssp EC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------C--
T ss_pred ecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-HHHhh-hccccc--
Confidence 65422 22345689999999999888899999999999999999999999976433221100 00000 000000
Q ss_pred cccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHH
Q 040392 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKL 448 (470)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L 448 (470)
........++.++.+++.+||+.||++|||+.|++++-
T Consensus 252 ---------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 252 ---------FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp ---------CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred ---------cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00001123467789999999999999999999999853
No 236
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=319.09 Aligned_cols=252 Identities=22% Similarity=0.277 Sum_probs=184.5
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccc--hhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG--RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+..+..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999875 689999999975432 22333445566788889999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA-PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
||+ ++.+..+.......+++..+..++.|++.||.||| ++ +++|+||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 55666666555567899999999999999999999 75 99999999999999999999999999997654322
Q ss_pred CcccccccccCccccCccccC-----CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccc
Q 040392 328 QSMTQTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVG 402 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (470)
......+++.|+|||.+. ...++.++||||||+++|||++|+.||.........+........+. .
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~----- 250 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPL-L----- 250 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCC-C-----
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCC-C-----
Confidence 223456899999999984 45688999999999999999999999976433222222111111000 0
Q ss_pred ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 403 ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.....++.++.+++.+||+.||.+||++.|++++
T Consensus 251 -----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 251 -----------PGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp -----------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred -----------CccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0011236678999999999999999999999985
No 237
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.5e-40 Score=333.06 Aligned_cols=251 Identities=23% Similarity=0.346 Sum_probs=187.5
Q ss_pred CCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEEEecCC
Q 040392 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYMP 252 (470)
Q Consensus 174 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~e~~~ 252 (470)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+..|+++++.+ +||||+++++++.+....++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 34556889999999998776678999999998643 234567899999876 89999999999999999999999996
Q ss_pred CCChHHhhhcCCCC------CCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCC-------------CCeE
Q 040392 253 HGSLEKYMYSSNYI------LDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDN-------------MVAH 313 (470)
Q Consensus 253 ~g~L~~~l~~~~~~------~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~-------------~~~k 313 (470)
|+|.+++...... .++..+..++.|++.||+||| +.+|+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 6999999765421 123345789999999999999 8999999999999999654 4899
Q ss_pred EeeeccccccCCCCCc--ccccccccCccccCccccCC-------CCCCCccchhhHHHHHHHHHh-CCCCCCccccCcc
Q 040392 314 LSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGRE-------GRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEM 383 (470)
Q Consensus 314 l~Dfg~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~-------~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~ 383 (470)
|+|||++......... .......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||......+.
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~ 248 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH
Confidence 9999999876543221 12234579999999999865 568999999999999999999 9999976433221
Q ss_pred hhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 384 TLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
............ ....+..++.++.+++.+||+.||.+|||+.|+++|
T Consensus 249 ---~i~~~~~~~~~~-------------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 249 ---NIIRGIFSLDEM-------------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp ---HHHHTCCCCCCC-------------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---HHhcCCCCcccc-------------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 111111110000 001123446789999999999999999999999874
No 238
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=332.97 Aligned_cols=250 Identities=22% Similarity=0.371 Sum_probs=189.6
Q ss_pred CCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEEEecC
Q 040392 173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~e~~ 251 (470)
.+|...+.||+|+||+||.....+++.||||++.... ...+.+|+++++.+ +||||+++++++.+....++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 4588889999999999766556689999999986432 23456799999999 7999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-----CCCeEEeeeccccccCCC
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD-----NMVAHLSDFSIAKLLTGE 326 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~-----~~~~kl~Dfg~a~~~~~~ 326 (470)
+ |+|.+++........+..+..++.|++.||.||| +.+|+||||||+||+++. ...+||+|||+++.....
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6 5999999877655666677899999999999999 899999999999999953 336889999999876433
Q ss_pred CC-cccccccccCccccCccccC---CCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccc
Q 040392 327 DQ-SMTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVV 401 (470)
Q Consensus 327 ~~-~~~~~~~~~t~~y~aPE~~~---~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (470)
.. ........||+.|+|||++. ...++.++|||||||++|||++ |..||........ ... .........
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~--~~~----~~~~~~~~~ 250 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NIL----LGACSLDCL 250 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH--HHH----TTCCCCTTS
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH--HHH----hccCCcccc
Confidence 21 12334467999999999987 4567889999999999999999 9999865322111 110 000000000
Q ss_pred cccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. .+...+..+.+|+.+||+.||++|||+.|+++|
T Consensus 251 -----~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 251 -----H-------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp -----C-------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----C-------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0 011235567899999999999999999999954
No 239
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.7e-40 Score=324.24 Aligned_cols=263 Identities=21% Similarity=0.253 Sum_probs=196.5
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCe-----
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEF----- 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~----- 243 (470)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999864 68999999986542 2335677889999999999999999999977653
Q ss_pred -eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 244 -KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 244 -~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
.++||||++ ++|.+++.. .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++..
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 489999997 589888743 4899999999999999999999 89999999999999999999999999999976
Q ss_pred cCCCCCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc-CCc-ccc
Q 040392 323 LTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL-PIS-TME 399 (470)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~-~~~ 399 (470)
.... .....+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||......+ .+........ +.. ...
T Consensus 176 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHT
T ss_pred CCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 4321 234568999999998876 678999999999999999999999997643211 1111111000 000 000
Q ss_pred cccc--------cccCc-hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 400 VVGA--------NLLSQ-EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 400 ~~~~--------~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.... .+... ..........++.++.+++.+||+.||++|||+.|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 0000 00000 000000112346789999999999999999999999875
No 240
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.7e-40 Score=326.54 Aligned_cols=266 Identities=16% Similarity=0.214 Sum_probs=198.4
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCC-----------CCcceeEEeeec
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-----------HRNLIKVISTCS 239 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv~~~~~~~ 239 (470)
.++|.+.+.||+|+||.||+|+. .+++.||||++... ......+..|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46799999999999999999986 56899999998743 234456778999998886 899999999987
Q ss_pred cCC----eeeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeC------
Q 040392 240 NEE----FKALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSA-PIIHCDLKPSNVLLD------ 307 (470)
Q Consensus 240 ~~~----~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dlkp~Nill~------ 307 (470)
... ..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++ +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 543 789999999 889999997643 45899999999999999999999 87 999999999999994
Q ss_pred CCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcc----
Q 040392 308 DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEM---- 383 (470)
Q Consensus 308 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~---- 383 (470)
..+.+||+|||++...... .....+|+.|+|||++.+..++.++||||||+++|||++|+.||........
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4558999999999865422 2335689999999999998999999999999999999999999986432110
Q ss_pred -hhhHHhhhhcC-----------------C-ccccccccccc-C---chhhhhHhhhhhHHHHHHHHhhccCCCccCCCC
Q 040392 384 -TLKHWVNDWLP-----------------I-STMEVVGANLL-S---QEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN 440 (470)
Q Consensus 384 -~~~~~~~~~~~-----------------~-~~~~~~~~~~~-~---~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps 440 (470)
.+......... . .....+..... . ........+..++.++.+|+.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 11111110000 0 00000000000 0 000011123456788999999999999999999
Q ss_pred HHHHHHH
Q 040392 441 AREIVAK 447 (470)
Q Consensus 441 ~~el~~~ 447 (470)
+.|+++|
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999885
No 241
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.4e-39 Score=322.46 Aligned_cols=200 Identities=25% Similarity=0.320 Sum_probs=170.6
Q ss_pred hhCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CC-----cceeEEeeeccCCe
Q 040392 171 ATDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HR-----NLIKVISTCSNEEF 243 (470)
Q Consensus 171 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~~~~~~~~~~~ 243 (470)
..++|++.+.||+|+||.||+|... +++.||||++... ......+..|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4578999999999999999999765 6889999999743 233456677888888875 44 49999999999999
Q ss_pred eeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC--CCCCeEEeeeccc
Q 040392 244 KALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD--DNMVAHLSDFSIA 320 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~--~~~~~kl~Dfg~a 320 (470)
.++||||++ |+|.+++.... ..+++..+..++.|++.||.|||. ...+|+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 59999997664 468999999999999999999992 146899999999999994 5788999999999
Q ss_pred cccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCcc
Q 040392 321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEI 378 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~ 378 (470)
...... .....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 209 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 876422 23457899999999999999999999999999999999999999864
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2e-39 Score=317.82 Aligned_cols=265 Identities=22% Similarity=0.277 Sum_probs=199.8
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CC-cEEEEEEeecccchhhhhHHHHHHHHhcCCCCc------ceeEEeeeccCCe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DG-MEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN------LIKVISTCSNEEF 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~~~~~~~~~~~ 243 (470)
.++|++.+.||+|+||.||+|... ++ +.||+|++... ......+..|+++++.++|++ ++.+++++.....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999864 34 68999998643 334566788999999998766 8999999999999
Q ss_pred eeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee----------------
Q 040392 244 KALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL---------------- 306 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill---------------- 306 (470)
.++||||+ +++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 567777765544 56899999999999999999999 9999999999999999
Q ss_pred ---CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcc
Q 040392 307 ---DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEM 383 (470)
Q Consensus 307 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~ 383 (470)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||++|+.||......+
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 246 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE- 246 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 56789999999999864322 233568999999999999999999999999999999999999998643321
Q ss_pred hhhHHhhhhcCCc--cc-------ccccccc-cCch--------------hhhhHhhhhhHHHHHHHHhhccCCCccCCC
Q 040392 384 TLKHWVNDWLPIS--TM-------EVVGANL-LSQE--------------DIHFVAKEQCVSCVFNLAMECTVESPEQRI 439 (470)
Q Consensus 384 ~~~~~~~~~~~~~--~~-------~~~~~~~-~~~~--------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp 439 (470)
.+........+.. .. ....... .... ..........+.++.+|+.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 1111111000000 00 0000000 0000 000011122356789999999999999999
Q ss_pred CHHHHHHH
Q 040392 440 NAREIVAK 447 (470)
Q Consensus 440 s~~el~~~ 447 (470)
|+.|+++|
T Consensus 327 t~~e~l~h 334 (355)
T 2eu9_A 327 TLAEALLH 334 (355)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999864
No 243
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=319.89 Aligned_cols=245 Identities=24% Similarity=0.324 Sum_probs=191.8
Q ss_pred HHHhhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccc------hhhhhHHHHHHHHhcC----CCCcceeEEe
Q 040392 168 LCRATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG------RALKGFDVECEMMKSI----RHRNLIKVIS 236 (470)
Q Consensus 168 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~nIv~~~~ 236 (470)
.....++|++.+.||+|+||.||+|+. .+++.||||++..... .....+..|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999975 4689999999865432 2334556789999888 8999999999
Q ss_pred eeccCCeeeEEEec-CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCCeEE
Q 040392 237 TCSNEEFKALVLEY-MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD-DNMVAHL 314 (470)
Q Consensus 237 ~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~-~~~~~kl 314 (470)
++...+..++|||+ +.+++|.+++.... .+++..+..++.|++.||+||| +.+++||||||+||+++ .++.+||
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEE
Confidence 99999999999999 78999999997654 5899999999999999999999 89999999999999999 8999999
Q ss_pred eeeccccccCCCCCcccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc
Q 040392 315 SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL 393 (470)
Q Consensus 315 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (470)
+|||++....... .....++..|+|||++.+..+ +.++||||||+++|||++|+.||.... .......
T Consensus 182 ~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~~ 250 (312)
T 2iwi_A 182 IDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILEAEL 250 (312)
T ss_dssp CCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHTCC
T ss_pred EEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhhhcc
Confidence 9999998764322 234568999999998876665 458999999999999999999986521 1100000
Q ss_pred CCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 394 PISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
..+..++.++.+++.+||+.||++|||+.|++++
T Consensus 251 --------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 --------------------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp --------------------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0012235678899999999999999999999975
No 244
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.5e-40 Score=321.59 Aligned_cols=244 Identities=23% Similarity=0.305 Sum_probs=200.4
Q ss_pred HHhhCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccc------hhhhhHHHHHHHHhcCC--CCcceeEEeeec
Q 040392 169 CRATDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG------RALKGFDVECEMMKSIR--HRNLIKVISTCS 239 (470)
Q Consensus 169 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~nIv~~~~~~~ 239 (470)
....++|++.+.||+|+||.||+|.. .+++.||||++..... .....+..|+.+++.++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34467899999999999999999975 4689999999975432 12355678999999996 599999999999
Q ss_pred cCCeeeEEEecCCC-CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC-CCCCeEEeee
Q 040392 240 NEEFKALVLEYMPH-GSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD-DNMVAHLSDF 317 (470)
Q Consensus 240 ~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~-~~~~~kl~Df 317 (470)
..+..++|||++.+ ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999999976 89999997644 6899999999999999999999 89999999999999999 7899999999
Q ss_pred ccccccCCCCCcccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc
Q 040392 318 SIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS 396 (470)
Q Consensus 318 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (470)
|++...... ......+|+.|+|||++.+..+ +.++||||||+++|||++|+.||..... ......
T Consensus 195 g~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~~~--- 260 (320)
T 3a99_A 195 GSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIRGQV--- 260 (320)
T ss_dssp TTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHCCC---
T ss_pred ccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------hhcccc---
Confidence 999876432 2234568999999998876665 6889999999999999999999865211 100000
Q ss_pred ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 397 TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
. .+..++.++.+++.+||+.||++|||+.|++++
T Consensus 261 ---------~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 261 ---------F--------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ---------C--------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---------c--------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 012236678899999999999999999999875
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2e-39 Score=336.47 Aligned_cols=271 Identities=23% Similarity=0.298 Sum_probs=201.2
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc-cchhhhhHHHHHHHHhcCCCCcceeEEeeecc------CCe
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ-CGRALKGFDVECEMMKSIRHRNLIKVISTCSN------EEF 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------~~~ 243 (470)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+..|+++++.++||||+++++++.. ...
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47899999999999999999976 46899999998654 33446678899999999999999999999765 677
Q ss_pred eeEEEecCCCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC---eEEeeec
Q 040392 244 KALVLEYMPHGSLEKYMYSSN--YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV---AHLSDFS 318 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~---~kl~Dfg 318 (470)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999997644 25888899999999999999999 899999999999999997765 9999999
Q ss_pred cccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc--
Q 040392 319 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS-- 396 (470)
Q Consensus 319 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-- 396 (470)
++....... ......+|+.|+|||.+.+..++.++||||||+++|||++|+.||...... ..|........
T Consensus 170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSSTTCC-----
T ss_pred ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhhhhhhcccch
Confidence 998764322 223467899999999999999999999999999999999999999753211 11211110000
Q ss_pred ---ccccccccccC--chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHH-----HHHHHHHH
Q 040392 397 ---TMEVVGANLLS--QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREI-----VAKLLKIR 452 (470)
Q Consensus 397 ---~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el-----~~~L~~i~ 452 (470)
..+........ ............+..+.+++..||..||++|||+.|+ .+.+..+.
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 00000000000 0000001123357889999999999999999999984 44444443
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.4e-38 Score=302.57 Aligned_cols=233 Identities=14% Similarity=0.052 Sum_probs=186.6
Q ss_pred hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999875 48999999997553 23346788999999999999999999999999999999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++++|.+++... .....+.+++.|++.||+||| +.+|+||||||+||+++.++.+||+++|.
T Consensus 110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~-------- 175 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPAT-------- 175 (286)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccc--------
Confidence 9999999999999543 356678899999999999999 99999999999999999999999985542
Q ss_pred CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392 328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS 407 (470)
Q Consensus 328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (470)
++ .++.++||||||+++|||++|+.||......+..... ......
T Consensus 176 --------------~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~--------------~~~~~~ 220 (286)
T 3uqc_A 176 --------------MP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA--------------ERDTAG 220 (286)
T ss_dssp --------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC--------------CBCTTS
T ss_pred --------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH--------------HHHhcc
Confidence 22 3678999999999999999999999864332210000 000000
Q ss_pred chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392 408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS 454 (470)
Q Consensus 408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~ 454 (470)
...........++.++.+++.+||+.||++| |+.|+++.|+++...
T Consensus 221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 0000111223457789999999999999999 999999999998643
No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4.2e-38 Score=301.37 Aligned_cols=231 Identities=20% Similarity=0.290 Sum_probs=181.0
Q ss_pred hCCCCCC-CeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHH-hcCCCCcceeEEeeecc----CCee
Q 040392 172 TDGFSEN-NLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMM-KSIRHRNLIKVISTCSN----EEFK 244 (470)
Q Consensus 172 ~~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~~~~~~~~----~~~~ 244 (470)
.++|.+. +.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +.++||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 4567776 7899999999999976 4689999999863 23566788887 66689999999999876 6778
Q ss_pred eEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeeeccc
Q 040392 245 ALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIA 320 (470)
Q Consensus 245 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~---~~~~kl~Dfg~a 320 (470)
++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999997754 46899999999999999999999 999999999999999998 789999999998
Q ss_pred cccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccc
Q 040392 321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV 400 (470)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (470)
.... +..++.++||||||+++|||++|+.||.......... .....
T Consensus 168 ~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~----------~~~~~ 213 (299)
T 3m2w_A 168 KETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP----------GMKTR 213 (299)
T ss_dssp EECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C----------CSCCS
T ss_pred cccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH----------HHHHH
Confidence 7542 2346779999999999999999999997643221100 00000
Q ss_pred ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392 401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK 447 (470)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~ 447 (470)
.. .............++.++.+++.+||+.||++|||+.|+++|
T Consensus 214 ~~---~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 214 IR---MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SC---TTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Hh---hccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00 000001111223457789999999999999999999999986
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-38 Score=337.53 Aligned_cols=242 Identities=21% Similarity=0.306 Sum_probs=195.1
Q ss_pred hCCCCCCCeecccCceEEEEEEeC--CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCe-----
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLG--DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEF----- 243 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~----- 243 (470)
.++|++.+.||+|+||.||+|.+. +|+.||||++.... ......+..|+++++.++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999875 58999999986442 3445678889999999999999999999976654
Q ss_pred eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392 244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
.++||||+++++|.+++.. .+++..+..++.|++.||.||| +.+|+||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999988754 5899999999999999999999 8999999999999999985 9999999999876
Q ss_pred CCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392 324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA 403 (470)
Q Consensus 324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (470)
... ....||+.|+|||++.+. ++.++||||||+++|+|++|..||........
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-------------------- 284 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGL-------------------- 284 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------------------
T ss_pred ccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccccc--------------------
Confidence 432 345699999999988664 48899999999999999999888764221110
Q ss_pred cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCC-CHHHHHHHHHHHHHH
Q 040392 404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-NAREIVAKLLKIRDS 454 (470)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~el~~~L~~i~~~ 454 (470)
... ......+..+.+++.+||+.||++|| +++++...|..+...
T Consensus 285 --~~~-----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 285 --PED-----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp --CTT-----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred --ccc-----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 000 00112245688999999999999999 567777777776543
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-38 Score=318.69 Aligned_cols=248 Identities=16% Similarity=0.178 Sum_probs=184.4
Q ss_pred hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCC-Cccee-------------
Q 040392 172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRH-RNLIK------------- 233 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~nIv~------------- 233 (470)
...|...+.||+|+||.||+|++ .+|+.||||++.... ....+.+.+|+.+++.++| +|...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34567778999999999999985 469999999987332 2346778899999999987 32211
Q ss_pred --------EEeeecc-----CCeeeEEEecCCCCChHHhhh------cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 040392 234 --------VISTCSN-----EEFKALVLEYMPHGSLEKYMY------SSNYILDIFQRLNIMIDVASALEYLHFGYSAPI 294 (470)
Q Consensus 234 --------~~~~~~~-----~~~~~lv~e~~~~g~L~~~l~------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i 294 (470)
+..++.. ....+++|+++ +++|.+++. .....+++..++.++.|+++||+||| +++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 1111111 12356777766 679999984 22445778899999999999999999 9999
Q ss_pred eecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCcccc----------CCCCCCCccchhhHHHH
Q 040392 295 IHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG----------REGRVSTNGDVYSFGIM 364 (470)
Q Consensus 295 ~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~----------~~~~~~~~~DvwslGv~ 364 (470)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||+
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 99999999999999999999999998764321 334567 999999998 56668899999999999
Q ss_pred HHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHH
Q 040392 365 LMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREI 444 (470)
Q Consensus 365 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el 444 (470)
+|||++|+.||......+.. . .... ....++.++.+++.+||+.||++||++.|+
T Consensus 307 l~elltg~~Pf~~~~~~~~~-~------------~~~~------------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~ 361 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALGGS-E------------WIFR------------SCKNIPQPVRALLEGFLRYPKEDRLLPLQA 361 (413)
T ss_dssp HHHHHHSSCCCCTTGGGSCS-G------------GGGS------------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHCCCCCCCcchhhhH-H------------HHHh------------hcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 99999999999764322110 0 0000 001235678999999999999999999998
Q ss_pred HHH--HHHHHHH
Q 040392 445 VAK--LLKIRDS 454 (470)
Q Consensus 445 ~~~--L~~i~~~ 454 (470)
+++ ++++...
T Consensus 362 l~~~~~~~~~~~ 373 (413)
T 3dzo_A 362 METPEYEQLRTE 373 (413)
T ss_dssp TTSHHHHHHHHH
T ss_pred HhCHHHHHHHHH
Confidence 765 5555443
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=8.1e-38 Score=304.45 Aligned_cols=245 Identities=17% Similarity=0.196 Sum_probs=183.4
Q ss_pred hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--------chhhhhHHHHHHHHhcCC---------CCcceeE
Q 040392 172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--------GRALKGFDVECEMMKSIR---------HRNLIKV 234 (470)
Q Consensus 172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~nIv~~ 234 (470)
.++|++.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45788999999999999999988 68999999997542 123367888999998886 6666555
Q ss_pred Eee-----------------ecc-------------CCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 040392 235 IST-----------------CSN-------------EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALE 284 (470)
Q Consensus 235 ~~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~ 284 (470)
.+. +.+ ....++||||+++|++.+.+.. ..+++..+..++.|++.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 333 6789999999999977666644 45799999999999999999
Q ss_pred HHhcCCCCCeeecCCCCCCeeeCCCC--------------------CeEEeeeccccccCCCCCcccccccccCccccCc
Q 040392 285 YLHFGYSAPIIHCDLKPSNVLLDDNM--------------------VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP 344 (470)
Q Consensus 285 ~LH~~~~~~i~H~dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 344 (470)
|||+ +.+|+||||||+|||++.++ .+||+|||+|+.... ....||+.|+||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccCh
Confidence 9993 37899999999999999887 999999999987642 134799999999
Q ss_pred cccCCCCCCCccchhhHHHH-HHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHH
Q 040392 345 EYGREGRVSTNGDVYSFGIM-LMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCV 423 (470)
Q Consensus 345 E~~~~~~~~~~~DvwslGv~-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 423 (470)
|++.+.. +.++||||+|++ .+++++|..||... .|...... . ........ ..........++.++
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~~-~---~~~~~~~~-~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLTD-K---MLKQMTFK-TKCNTPAMKQIKRKI 312 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHHH-H---HHHTCCCS-SCCCSHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHHH-h---hhhhhccC-cccchhhhhhcCHHH
Confidence 9998766 889999998777 77788899987541 11100000 0 00000000 000011234568889
Q ss_pred HHHHhhccCCCccCCCCHHHHH-HH
Q 040392 424 FNLAMECTVESPEQRINAREIV-AK 447 (470)
Q Consensus 424 ~~l~~~cl~~dP~~Rps~~el~-~~ 447 (470)
.+|+.+||+.| |+.|++ +|
T Consensus 313 ~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHhccC-----CHHHHHhcC
Confidence 99999999977 999988 54
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.1e-30 Score=270.27 Aligned_cols=184 Identities=19% Similarity=0.107 Sum_probs=130.0
Q ss_pred ecccCceEEEEEE-eCCCcEEEEEEeeccc----------chhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEEE
Q 040392 181 IGRGGFGSVYKAR-LGDGMEVAVKVFNLQC----------GRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 181 ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.+.|+.|.+..++ .-.|+.+|+|++.... ....+.+.+|+++|+++ .|+||++++++++++...||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666665553 2348889999986541 23345688999999999 6999999999999999999999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 328 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 328 (470)
||++|++|.+++...+ .++.. +|+.||+.||+|+| ++||+||||||+|||++.++.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~- 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC- 393 (569)
T ss_dssp ECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred ecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC-
Confidence 9999999999997654 45553 58999999999999 9999999999999999999999999999998764322
Q ss_pred cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCC
Q 040392 329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374 (470)
Q Consensus 329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p 374 (470)
......+||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 394 -~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 23345679999999999875 567789999999998887665544
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=2.5e-27 Score=243.73 Aligned_cols=186 Identities=16% Similarity=0.165 Sum_probs=144.5
Q ss_pred CCCCeecccCceEEEEEEeCCCcEEEEEEeecccc--------hhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392 176 SENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG--------RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 176 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv 247 (470)
...+.||+|+||.||+|.. .++.+++|....... ...+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999955 578899998643321 1234578999999999999999555555566677999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 327 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~ 327 (470)
|||+++++|.+++.. +..++.|+++||+||| +++|+||||||+|||++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999965 5589999999999999 999999999999999998 99999999998764321
Q ss_pred Ccc-----cccccccCccccCccccCC--CCCCCccchhhHHHHHHHHHhCCCCCC
Q 040392 328 QSM-----TQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLMETFTGKKPTN 376 (470)
Q Consensus 328 ~~~-----~~~~~~~t~~y~aPE~~~~--~~~~~~~DvwslGv~l~el~tg~~p~~ 376 (470)
... ......||+.|+|||++.. ..|+...|+|+..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 111 1235679999999999876 567888999999999998888777653
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=1.6e-24 Score=204.59 Aligned_cols=149 Identities=17% Similarity=0.125 Sum_probs=118.2
Q ss_pred HHhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccc------------------hhhhhHHHHHHHHhcCCCCc
Q 040392 169 CRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG------------------RALKGFDVECEMMKSIRHRN 230 (470)
Q Consensus 169 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~n 230 (470)
......|.+.+.||+|+||.||+|...+|+.||+|+++.... .....+.+|+++++.++|
T Consensus 86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~-- 163 (282)
T 1zar_A 86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG-- 163 (282)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT--
T ss_pred HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC--
Confidence 334455667799999999999999887799999999864321 134567889999999994
Q ss_pred ceeEEeeeccCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC
Q 040392 231 LIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM 310 (470)
Q Consensus 231 Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~ 310 (470)
+++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.||| +.+|+||||||+|||++ ++
T Consensus 164 -~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~ 229 (282)
T 1zar_A 164 -LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EE 229 (282)
T ss_dssp -SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TT
T ss_pred -CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CC
Confidence 555554433 45689999999999988 421 134579999999999999 99999999999999999 99
Q ss_pred CeEEeeeccccccCCCCCcccccccccCccccCccccC
Q 040392 311 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR 348 (470)
Q Consensus 311 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~ 348 (470)
.+||+|||+|+.. ..+.|||++.
T Consensus 230 ~vkl~DFG~a~~~---------------~~~~a~e~l~ 252 (282)
T 1zar_A 230 GIWIIDFPQSVEV---------------GEEGWREILE 252 (282)
T ss_dssp EEEECCCTTCEET---------------TSTTHHHHHH
T ss_pred cEEEEECCCCeEC---------------CCCCHHHHHH
Confidence 9999999998732 3467888764
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.80 E-value=2.9e-20 Score=173.33 Aligned_cols=137 Identities=20% Similarity=0.243 Sum_probs=106.0
Q ss_pred CCCCCeecccCceEEEEEEe-CCCcE--EEEEEeecccch------------------------hhhhHHHHHHHHhcCC
Q 040392 175 FSENNLIGRGGFGSVYKARL-GDGME--VAVKVFNLQCGR------------------------ALKGFDVECEMMKSIR 227 (470)
Q Consensus 175 ~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 227 (470)
|.+.+.||+|+||.||+|.. .+|+. ||||+++..... ....+..|++++..+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999987 67989 999997543111 1125778999999998
Q ss_pred CCcc--eeEEeeeccCCeeeEEEecCCC-C----ChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCC
Q 040392 228 HRNL--IKVISTCSNEEFKALVLEYMPH-G----SLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLK 300 (470)
Q Consensus 228 h~nI--v~~~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlk 300 (470)
|+++ ..++.+ ...++||||+.+ | +|.++... .++..+..++.|++.||.|||. ..+|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8754 444443 346899999942 3 67666532 2244667899999999999994 5789999999
Q ss_pred CCCeeeCCCCCeEEeeecccccc
Q 040392 301 PSNVLLDDNMVAHLSDFSIAKLL 323 (470)
Q Consensus 301 p~Nill~~~~~~kl~Dfg~a~~~ 323 (470)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.72 E-value=3.4e-18 Score=165.74 Aligned_cols=137 Identities=16% Similarity=0.204 Sum_probs=98.9
Q ss_pred CCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccc--------------hhhhhH--------HHHHHHHhcCCCCc
Q 040392 173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG--------------RALKGF--------DVECEMMKSIRHRN 230 (470)
Q Consensus 173 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~--------~~E~~~l~~l~h~n 230 (470)
.-|.+.+.||+|++|.||+|...+|+.||||+++.... ...... ..|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34888999999999999999998999999999753210 001111 23445555553333
Q ss_pred c--eeEEeeeccCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC
Q 040392 231 L--IKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD 308 (470)
Q Consensus 231 I--v~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~ 308 (470)
+ ...+++ ...++||||++|++|.++... .....++.|++.+|.||| ..+|+||||||.|||+++
T Consensus 175 v~vp~p~~~----~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQ----SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEE----ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEE
T ss_pred CCCCeeeec----cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeC
Confidence 2 122222 123699999999888766421 124568899999999999 899999999999999987
Q ss_pred CC----------CeEEeeecccccc
Q 040392 309 NM----------VAHLSDFSIAKLL 323 (470)
Q Consensus 309 ~~----------~~kl~Dfg~a~~~ 323 (470)
++ .+.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999987654
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.48 E-value=4.1e-14 Score=152.12 Aligned_cols=108 Identities=44% Similarity=0.761 Sum_probs=96.3
Q ss_pred CCCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCC
Q 040392 1 VIPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPF 80 (470)
Q Consensus 1 ~~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l 80 (470)
++|.+|++|++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|+.||+++|+++|.+|..+.+
T Consensus 647 ~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~ 726 (768)
T 3rgz_A 647 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQF 726 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSG
T ss_pred cCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhh
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999998889
Q ss_pred CCCccccccCCccccCCCCCCCCCCCCCCCC
Q 040392 81 RNFSVESFEGNELLCGSPNLQVPPCKTSNHH 111 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~~~~~~~~~~~~~~~~~ 111 (470)
.++....+.+|+.+|+.| .++|+.....
T Consensus 727 ~~~~~~~~~gN~~Lcg~~---l~~C~~~~~~ 754 (768)
T 3rgz_A 727 ETFPPAKFLNNPGLCGYP---LPRCDPSNAD 754 (768)
T ss_dssp GGSCGGGGCSCTEEESTT---SCCCCSCC--
T ss_pred ccCCHHHhcCCchhcCCC---CcCCCCCccC
Confidence 999999999999999988 3478765554
No 257
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.46 E-value=1.4e-13 Score=121.98 Aligned_cols=94 Identities=27% Similarity=0.319 Sum_probs=71.8
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l 80 (470)
+|..|.++++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.|+..++. +..+
T Consensus 46 ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l 125 (193)
T 2wfh_A 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDL 125 (193)
T ss_dssp CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTC
T ss_pred hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcC
Confidence 566777778888888888888866666777788888888888888866666777788888888888888766654 4567
Q ss_pred CCCccccccCCcccc
Q 040392 81 RNFSVESFEGNELLC 95 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~ 95 (470)
++|+.+++++|++.|
T Consensus 126 ~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 126 SALSHLAIGANPLYC 140 (193)
T ss_dssp TTCCEEECCSSCEEC
T ss_pred ccccEEEeCCCCeec
Confidence 778888888888776
No 258
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=2e-13 Score=118.80 Aligned_cols=93 Identities=23% Similarity=0.342 Sum_probs=83.6
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l 80 (470)
+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. +..+
T Consensus 27 iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l 104 (174)
T 2r9u_A 27 VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNL 104 (174)
T ss_dssp CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccc
Confidence 566664 8999999999999988899999999999999999999966666678999999999999999988876 6789
Q ss_pred CCCccccccCCccccC
Q 040392 81 RNFSVESFEGNELLCG 96 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~~ 96 (470)
++|+.|++++|++.|.
T Consensus 105 ~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 105 KSLTHIYLYNNPWDCE 120 (174)
T ss_dssp TTCSEEECCSSCBCTT
T ss_pred cCCCEEEeCCCCcccc
Confidence 9999999999999874
No 259
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=2.3e-13 Score=117.97 Aligned_cols=93 Identities=26% Similarity=0.320 Sum_probs=84.0
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l 80 (470)
+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++.++. +..+
T Consensus 24 ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l 101 (170)
T 3g39_A 24 VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNL 101 (170)
T ss_dssp CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCC
Confidence 566553 8899999999999988889999999999999999999977777789999999999999999988876 5789
Q ss_pred CCCccccccCCccccC
Q 040392 81 RNFSVESFEGNELLCG 96 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~~ 96 (470)
++|+.|++++|++.|.
T Consensus 102 ~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 102 KSLTHIWLLNNPWDCA 117 (170)
T ss_dssp TTCCEEECCSSCBCTT
T ss_pred CCCCEEEeCCCCCCCC
Confidence 9999999999999874
No 260
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.42 E-value=5.4e-13 Score=124.24 Aligned_cols=146 Identities=15% Similarity=0.082 Sum_probs=115.1
Q ss_pred HHhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CCcceeEEeeeccCCeeeEE
Q 040392 169 CRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRNLIKVISTCSNEEFKALV 247 (470)
Q Consensus 169 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv 247 (470)
....+.|.....++.|+.+.||++... ++.+++|+...........+..|+++++.+. +.++.++++++...+..++|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 344567888888898999999999764 7899999986532233456889999999884 67788999999888899999
Q ss_pred EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 040392 248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY------------------------------------- 290 (470)
Q Consensus 248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------------------------------------- 290 (470)
|||++|.+|.+... +......++.+++++|..||...
T Consensus 89 ~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 89 MSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp EECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 99999999987642 11233468889999999999510
Q ss_pred -------------------CCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392 291 -------------------SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321 (470)
Q Consensus 291 -------------------~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 321 (470)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1458999999999999876667899998775
No 261
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.41 E-value=3.6e-13 Score=119.30 Aligned_cols=90 Identities=24% Similarity=0.322 Sum_probs=66.8
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCCc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNFS 84 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~ 84 (470)
|+++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|+|++.++. +..+++|+
T Consensus 50 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (192)
T 1w8a_A 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129 (192)
T ss_dssp GGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCC
T ss_pred cccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCC
Confidence 66777777777777777777677777777777777777777766666677777777777777777766554 45677777
Q ss_pred cccccCCcccc
Q 040392 85 VESFEGNELLC 95 (470)
Q Consensus 85 ~l~~~~n~~~~ 95 (470)
.+++++|++.|
T Consensus 130 ~L~L~~N~l~c 140 (192)
T 1w8a_A 130 SLNLASNPFNC 140 (192)
T ss_dssp EEECTTCCBCC
T ss_pred EEEeCCCCccC
Confidence 77777777765
No 262
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=118.60 Aligned_cols=89 Identities=16% Similarity=0.132 Sum_probs=53.4
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCCc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNFS 84 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~ 84 (470)
|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|.|++..+..|..+++|+.|+|++|.|++.++. +..+++|+
T Consensus 53 ~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 132 (220)
T ss_dssp GGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS
T ss_pred hccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC
Confidence 45666666666666666655555566666666666666666655555566666666666666666655433 34556666
Q ss_pred cccccCCccc
Q 040392 85 VESFEGNELL 94 (470)
Q Consensus 85 ~l~~~~n~~~ 94 (470)
.|++++|.+.
T Consensus 133 ~L~L~~N~l~ 142 (220)
T 2v70_A 133 LLSLYDNQIT 142 (220)
T ss_dssp EEECTTSCCC
T ss_pred EEECCCCcCC
Confidence 6666666554
No 263
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.37 E-value=1.4e-12 Score=118.13 Aligned_cols=90 Identities=27% Similarity=0.247 Sum_probs=58.1
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l 83 (470)
.|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|.|++..+..|..+++|+.|+|++|.|++.++. +..+++|
T Consensus 51 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 130 (220)
T 2v9t_B 51 AFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNL 130 (220)
T ss_dssp SSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCC
Confidence 566666777777777777666666666677777777777777644444456666666777776666655443 3556666
Q ss_pred ccccccCCccc
Q 040392 84 SVESFEGNELL 94 (470)
Q Consensus 84 ~~l~~~~n~~~ 94 (470)
+.|++++|.+.
T Consensus 131 ~~L~L~~N~l~ 141 (220)
T 2v9t_B 131 NLLSLYDNKLQ 141 (220)
T ss_dssp CEEECCSSCCS
T ss_pred CEEECCCCcCC
Confidence 66666666654
No 264
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1e-12 Score=127.67 Aligned_cols=93 Identities=26% Similarity=0.288 Sum_probs=85.5
Q ss_pred CCcccCCCCCCcEeeCcC-CcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGY-NRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~-n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l 80 (470)
+|. |+.+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++..|..|..|++|+.|+|++|+|++.++.....
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 788 99999999999996 9999887788999999999999999999988889999999999999999999888876554
Q ss_pred CCCccccccCCcccc
Q 040392 81 RNFSVESFEGNELLC 95 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~ 95 (470)
.+|+.|++.+|++.|
T Consensus 103 ~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 103 LSLQELVLSGNPLHC 117 (347)
T ss_dssp CCCCEEECCSSCCCC
T ss_pred CCceEEEeeCCCccC
Confidence 459999999999987
No 265
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.36 E-value=8e-13 Score=126.48 Aligned_cols=96 Identities=39% Similarity=0.649 Sum_probs=88.3
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
+|..|.++++|+.|+|++|.+++.+|. +..+++|+.|+|++|+|++.+|..+..+++|+.|++++|.|++.+|....++
T Consensus 213 ~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~ 291 (313)
T 1ogq_A 213 ASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQ 291 (313)
T ss_dssp CGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGG
T ss_pred CCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCcccc
Confidence 567788999999999999999966554 8889999999999999999999999999999999999999999999888999
Q ss_pred CCccccccCCccccCCC
Q 040392 82 NFSVESFEGNELLCGSP 98 (470)
Q Consensus 82 ~l~~l~~~~n~~~~~~~ 98 (470)
+|+.+++.+|+.+|+.|
T Consensus 292 ~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 292 RFDVSAYANNKCLCGSP 308 (313)
T ss_dssp GSCGGGTCSSSEEESTT
T ss_pred ccChHHhcCCCCccCCC
Confidence 99999999999999987
No 266
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.33 E-value=4.7e-12 Score=110.43 Aligned_cols=84 Identities=26% Similarity=0.254 Sum_probs=43.7
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFSVESF 88 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~~ 88 (470)
++|+.|+|++|++++..+..|.++++|+.|+|++|.|++..+..+..+++|+.|++++|.|++.++.. ..+++|+.|++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 45555555555555444444455555555555555555433344455555555555555555444432 44555555555
Q ss_pred cCCcc
Q 040392 89 EGNEL 93 (470)
Q Consensus 89 ~~n~~ 93 (470)
++|.+
T Consensus 108 ~~N~l 112 (177)
T 2o6r_A 108 DTNQL 112 (177)
T ss_dssp CSSCC
T ss_pred cCCcc
Confidence 55554
No 267
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.29 E-value=7.7e-12 Score=116.02 Aligned_cols=136 Identities=15% Similarity=0.095 Sum_probs=101.1
Q ss_pred CCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCc--ceeEEeeeccCCeeeEEEecC
Q 040392 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN--LIKVISTCSNEEFKALVLEYM 251 (470)
Q Consensus 174 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~~~~~~~~~~~~~lv~e~~ 251 (470)
.+.+....+.|..+.||++...+|..+++|+.... ....+..|+++++.+.+.+ +.+++++....+..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34443333456679999998777888999997543 3356788999999886544 566888888778889999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY----------------------------------------- 290 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 290 (470)
+|.+|. ... .+ ...++.++++.|..||...
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998884 211 12 2357788888888888421
Q ss_pred --------------CCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392 291 --------------SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321 (470)
Q Consensus 291 --------------~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 321 (470)
...++|+|++|.||++++++.+.|+||+.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 0129999999999999887777899999875
No 268
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.29 E-value=8.3e-12 Score=113.71 Aligned_cols=92 Identities=27% Similarity=0.336 Sum_probs=73.4
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRN 82 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~ 82 (470)
|..|.++++|+.|+|++|+|+...+..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|.|+..+..+..+++
T Consensus 57 ~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~ 136 (229)
T 3e6j_A 57 PGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTH 136 (229)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTT
T ss_pred HHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCC
Confidence 56678888888888888888855556678888888888888888866666678888888888888888866666677888
Q ss_pred CccccccCCccc
Q 040392 83 FSVESFEGNELL 94 (470)
Q Consensus 83 l~~l~~~~n~~~ 94 (470)
|+.|++++|.+.
T Consensus 137 L~~L~L~~N~l~ 148 (229)
T 3e6j_A 137 LTHLALDQNQLK 148 (229)
T ss_dssp CSEEECCSSCCC
T ss_pred CCEEECCCCcCC
Confidence 888888888775
No 269
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.28 E-value=1.2e-13 Score=140.56 Aligned_cols=90 Identities=23% Similarity=0.191 Sum_probs=61.7
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCcccc-CCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFG-DLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~-~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
|..|+++++|+.|+|++|.+++.+|..+. ++++|+.|+|++|.|++. |. +..+++|+.|+|++|.|++.++.+..++
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~ 214 (487)
T 3oja_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAA 214 (487)
T ss_dssp GBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGT
T ss_pred chhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCC
Confidence 44566677777777777777766666664 567777777777777743 22 3357777777777777777666666777
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|.+.
T Consensus 215 ~L~~L~Ls~N~l~ 227 (487)
T 3oja_A 215 GVTWISLRNNKLV 227 (487)
T ss_dssp TCSEEECTTSCCC
T ss_pred CccEEEecCCcCc
Confidence 7777777777764
No 270
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.28 E-value=1.4e-11 Score=110.42 Aligned_cols=90 Identities=30% Similarity=0.359 Sum_probs=68.1
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l 83 (470)
.|.++++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..+..+++|+.|++++|.|++.++. +..+++|
T Consensus 47 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 126 (208)
T 2o6s_A 47 VFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQL 126 (208)
T ss_dssp TTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcC
Confidence 467788888888888888866555677788888888888888855555677788888888888888766665 3667788
Q ss_pred ccccccCCccc
Q 040392 84 SVESFEGNELL 94 (470)
Q Consensus 84 ~~l~~~~n~~~ 94 (470)
+.|++++|.+.
T Consensus 127 ~~L~l~~N~l~ 137 (208)
T 2o6s_A 127 KDLRLYQNQLK 137 (208)
T ss_dssp CEEECCSSCCS
T ss_pred CEEECCCCccc
Confidence 88888888764
No 271
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.27 E-value=4.9e-12 Score=135.96 Aligned_cols=99 Identities=31% Similarity=0.494 Sum_probs=92.2
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l 80 (470)
+|..++++++|+.|||++|+++|.+|..++++++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|. +..+
T Consensus 624 ~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred CchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 467888999999999999999999999999999999999999999999999999999999999999999988876 4789
Q ss_pred CCCccccccCCccccCCCCC
Q 040392 81 RNFSVESFEGNELLCGSPNL 100 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~~~~~~ 100 (470)
++|+.+++++|++....|..
T Consensus 704 ~~L~~L~ls~N~l~g~iP~~ 723 (768)
T 3rgz_A 704 TMLTEIDLSNNNLSGPIPEM 723 (768)
T ss_dssp CCCSEEECCSSEEEEECCSS
T ss_pred CCCCEEECcCCcccccCCCc
Confidence 99999999999998777743
No 272
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.26 E-value=1.6e-11 Score=113.48 Aligned_cols=92 Identities=25% Similarity=0.265 Sum_probs=72.4
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~ 81 (470)
|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|.|++.++. +..++
T Consensus 76 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 155 (251)
T 3m19_A 76 AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCc
Confidence 44577888888888888888866667778888888888888888866556677888888888888888876664 56778
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|.+.
T Consensus 156 ~L~~L~L~~N~l~ 168 (251)
T 3m19_A 156 NLQTLSLSTNQLQ 168 (251)
T ss_dssp TCCEEECCSSCCS
T ss_pred CCCEEECCCCcCC
Confidence 8888888888775
No 273
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.25 E-value=1.9e-11 Score=111.38 Aligned_cols=91 Identities=26% Similarity=0.295 Sum_probs=66.0
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l 80 (470)
+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.|++.++.. ..+
T Consensus 34 ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l 111 (229)
T 3e6j_A 34 VPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRL 111 (229)
T ss_dssp CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcc
Confidence 444443 67778888888888777777777888888888888887544455677788888888888877666653 567
Q ss_pred CCCccccccCCccc
Q 040392 81 RNFSVESFEGNELL 94 (470)
Q Consensus 81 ~~l~~l~~~~n~~~ 94 (470)
++|+.|++++|.+.
T Consensus 112 ~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 112 VHLKELFMCCNKLT 125 (229)
T ss_dssp TTCCEEECCSSCCC
T ss_pred hhhCeEeccCCccc
Confidence 77888888877765
No 274
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.25 E-value=7.1e-12 Score=105.91 Aligned_cols=91 Identities=26% Similarity=0.235 Sum_probs=74.4
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccC--CCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEI--PRGGP 79 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~--~~~~~ 79 (470)
+|..+.++++|+.|+|++|.+++. ..+.++++|+.|+|++|.|++.+|..+..+++|+.|++++|.|++.+ ..+..
T Consensus 34 ~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~ 111 (149)
T 2je0_A 34 LEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKK 111 (149)
T ss_dssp CCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGG
T ss_pred HHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhh
Confidence 566778888888888888888855 67888888888888888888768877777888888888888888643 55677
Q ss_pred CCCCccccccCCccc
Q 040392 80 FRNFSVESFEGNELL 94 (470)
Q Consensus 80 l~~l~~l~~~~n~~~ 94 (470)
+++|+.|++++|++.
T Consensus 112 l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 112 LENLKSLDLFNCEVT 126 (149)
T ss_dssp CTTCCEEECTTCGGG
T ss_pred CCCCCEEeCcCCccc
Confidence 888888888888874
No 275
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.24 E-value=1.7e-11 Score=110.91 Aligned_cols=93 Identities=27% Similarity=0.363 Sum_probs=47.5
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~ 81 (470)
|..|.++++|+.|+|++|+|+...+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.|++.++. +..++
T Consensus 73 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 152 (220)
T 2v9t_B 73 PDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152 (220)
T ss_dssp TTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred HHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCC
Confidence 34455555555555555555533333344555555555555555544445555555555555555555544443 23445
Q ss_pred CCccccccCCcccc
Q 040392 82 NFSVESFEGNELLC 95 (470)
Q Consensus 82 ~l~~l~~~~n~~~~ 95 (470)
+|+.+++++|++.|
T Consensus 153 ~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 153 AIQTMHLAQNPFIC 166 (220)
T ss_dssp TCCEEECCSSCEEC
T ss_pred CCCEEEeCCCCcCC
Confidence 55555555555544
No 276
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.24 E-value=2.9e-11 Score=113.11 Aligned_cols=90 Identities=29% Similarity=0.354 Sum_probs=64.5
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l 83 (470)
.|+++++|+.|+|++|++++..|..|.++++|+.|+|++|.+++..+..+..+++|+.|++++|.|++.++.. ..+++|
T Consensus 104 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 183 (272)
T 3rfs_A 104 VFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQL 183 (272)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccC
Confidence 4567777777777777777666666777777777777777777655556677777777777777777665553 566777
Q ss_pred ccccccCCccc
Q 040392 84 SVESFEGNELL 94 (470)
Q Consensus 84 ~~l~~~~n~~~ 94 (470)
+.|++++|.+.
T Consensus 184 ~~L~L~~N~l~ 194 (272)
T 3rfs_A 184 KDLRLYQNQLK 194 (272)
T ss_dssp CEEECCSSCCS
T ss_pred CEEECCCCcCC
Confidence 77777777764
No 277
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.23 E-value=1.8e-11 Score=110.72 Aligned_cols=94 Identities=24% Similarity=0.260 Sum_probs=78.4
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~ 81 (470)
|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.|++.++. +..++
T Consensus 74 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 153 (220)
T 2v70_A 74 EGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLH 153 (220)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCT
T ss_pred HHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCC
Confidence 34688888899999999998877777788888999999999998877788888888999999999988877554 56788
Q ss_pred CCccccccCCccccC
Q 040392 82 NFSVESFEGNELLCG 96 (470)
Q Consensus 82 ~l~~l~~~~n~~~~~ 96 (470)
+|+.|++++|++.|.
T Consensus 154 ~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 154 SLSTLNLLANPFNCN 168 (220)
T ss_dssp TCCEEECCSCCEECS
T ss_pred CCCEEEecCcCCcCC
Confidence 888889999988773
No 278
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.23 E-value=3.2e-11 Score=106.65 Aligned_cols=91 Identities=26% Similarity=0.458 Sum_probs=81.9
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l 80 (470)
+|..+. ++|+.|+|++|+|+ .+|..|.++++|+.|+|++|.|++..+..|..+++|+.|+|++|.|++.++. +..+
T Consensus 25 ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l 101 (193)
T 2wfh_A 25 LPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGL 101 (193)
T ss_dssp CCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTC
T ss_pred CCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCC
Confidence 565553 68999999999999 7889999999999999999999987778899999999999999999988775 5789
Q ss_pred CCCccccccCCcccc
Q 040392 81 RNFSVESFEGNELLC 95 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~ 95 (470)
++|+.|++++|.+..
T Consensus 102 ~~L~~L~L~~N~l~~ 116 (193)
T 2wfh_A 102 KSLRLLSLHGNDISV 116 (193)
T ss_dssp TTCCEEECCSSCCCB
T ss_pred CCCCEEECCCCCCCe
Confidence 999999999999864
No 279
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.22 E-value=2.8e-11 Score=114.35 Aligned_cols=93 Identities=26% Similarity=0.235 Sum_probs=81.0
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l 80 (470)
+|..+.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|+|++.++.. ..+
T Consensus 92 l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l 171 (290)
T 1p9a_G 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGL 171 (290)
T ss_dssp CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTC
T ss_pred CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCc
Confidence 6778888999999999999999777788999999999999999999776677888999999999999999777665 568
Q ss_pred CCCccccccCCccc
Q 040392 81 RNFSVESFEGNELL 94 (470)
Q Consensus 81 ~~l~~l~~~~n~~~ 94 (470)
++|+.|++++|++.
T Consensus 172 ~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 172 ENLDTLLLQENSLY 185 (290)
T ss_dssp TTCCEEECCSSCCC
T ss_pred CCCCEEECCCCcCC
Confidence 89999999999885
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.22 E-value=1.4e-11 Score=129.24 Aligned_cols=94 Identities=27% Similarity=0.405 Sum_probs=85.4
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l 80 (470)
+|..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.||+++|+|++.++.. ..+
T Consensus 486 ~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 565 (635)
T 4g8a_A 486 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHF 565 (635)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCC
T ss_pred CchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhh
Confidence 4678899999999999999999888999999999999999999999888888999999999999999999887764 455
Q ss_pred -CCCccccccCCcccc
Q 040392 81 -RNFSVESFEGNELLC 95 (470)
Q Consensus 81 -~~l~~l~~~~n~~~~ 95 (470)
++|+.|++++|++.|
T Consensus 566 ~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 566 PSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CTTCCEEECTTCCBCC
T ss_pred hCcCCEEEeeCCCCcc
Confidence 689999999999988
No 281
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.22 E-value=1.1e-11 Score=106.97 Aligned_cols=91 Identities=30% Similarity=0.242 Sum_probs=74.4
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccC--CCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEI--PRGGP 79 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~--~~~~~ 79 (470)
+|..+.++++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+++|+.|++++|.|++.+ ..+..
T Consensus 41 i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~ 118 (168)
T 2ell_A 41 IEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKK 118 (168)
T ss_dssp CSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSS
T ss_pred HHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhc
Confidence 566778888888888888888855 77888888888888888888767777777888888888888888654 45677
Q ss_pred CCCCccccccCCccc
Q 040392 80 FRNFSVESFEGNELL 94 (470)
Q Consensus 80 l~~l~~l~~~~n~~~ 94 (470)
+++|+.|++++|++.
T Consensus 119 l~~L~~L~l~~N~l~ 133 (168)
T 2ell_A 119 LECLKSLDLFNCEVT 133 (168)
T ss_dssp CSCCCEEECCSSGGG
T ss_pred CCCCCEEEeeCCcCc
Confidence 888888888888874
No 282
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.22 E-value=2.2e-11 Score=107.63 Aligned_cols=95 Identities=28% Similarity=0.351 Sum_probs=83.0
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCc-cccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPD-SFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGP 79 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~-~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~ 79 (470)
+|..+.. +|+.|+|++|+|++..+. .|.++++|+.|+|++|+|++..|..|..+++|+.|++++|.|++.++. +..
T Consensus 23 ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 100 (192)
T 1w8a_A 23 IPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG 100 (192)
T ss_dssp CCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTT
T ss_pred CccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcC
Confidence 5665544 899999999999966554 489999999999999999988899999999999999999999988876 578
Q ss_pred CCCCccccccCCccccCCC
Q 040392 80 FRNFSVESFEGNELLCGSP 98 (470)
Q Consensus 80 l~~l~~l~~~~n~~~~~~~ 98 (470)
+++|+.|++++|.+....|
T Consensus 101 l~~L~~L~L~~N~l~~~~~ 119 (192)
T 1w8a_A 101 LHQLKTLNLYDNQISCVMP 119 (192)
T ss_dssp CTTCCEEECCSSCCCEECT
T ss_pred CCCCCEEECCCCcCCeeCH
Confidence 9999999999999865444
No 283
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.18 E-value=7.5e-11 Score=108.88 Aligned_cols=93 Identities=28% Similarity=0.359 Sum_probs=81.5
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~ 81 (470)
|..|.++++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|.|++.++.. ..++
T Consensus 52 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 131 (251)
T 3m19_A 52 DATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLT 131 (251)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred HhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCC
Confidence 456888999999999999999888888899999999999999999777778889999999999999999777764 6789
Q ss_pred CCccccccCCcccc
Q 040392 82 NFSVESFEGNELLC 95 (470)
Q Consensus 82 ~l~~l~~~~n~~~~ 95 (470)
+|+.|++++|.+..
T Consensus 132 ~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 132 KLKELRLNTNQLQS 145 (251)
T ss_dssp TCCEEECCSSCCCC
T ss_pred cccEEECcCCcCCc
Confidence 99999999998753
No 284
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.17 E-value=7e-11 Score=110.38 Aligned_cols=90 Identities=27% Similarity=0.324 Sum_probs=64.5
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l 83 (470)
.|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|.|++..+..+..+++|+.|++++|.|++.++. +..+++|
T Consensus 104 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 183 (270)
T 2o6q_A 104 VFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTEL 183 (270)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCc
Confidence 456777778888888877766666677777777777777777755555567777777777777777765554 3566777
Q ss_pred ccccccCCccc
Q 040392 84 SVESFEGNELL 94 (470)
Q Consensus 84 ~~l~~~~n~~~ 94 (470)
+.|++++|++.
T Consensus 184 ~~L~L~~N~l~ 194 (270)
T 2o6q_A 184 KTLKLDNNQLK 194 (270)
T ss_dssp CEEECCSSCCS
T ss_pred CEEECCCCcCC
Confidence 77777777664
No 285
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.16 E-value=7.9e-11 Score=111.22 Aligned_cols=87 Identities=31% Similarity=0.279 Sum_probs=69.4
Q ss_pred CCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCcc
Q 040392 7 GGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFSV 85 (470)
Q Consensus 7 ~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~ 85 (470)
+.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..|..|..+++|+.|++++|+|++.++.. ..+++|+.
T Consensus 74 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCE
Confidence 56788888888888888 67777888888888888888888666677888888888888888888766654 56788888
Q ss_pred ccccCCccc
Q 040392 86 ESFEGNELL 94 (470)
Q Consensus 86 l~~~~n~~~ 94 (470)
|++++|++.
T Consensus 153 L~L~~N~l~ 161 (290)
T 1p9a_G 153 LSLANNNLT 161 (290)
T ss_dssp EECTTSCCS
T ss_pred EECCCCcCC
Confidence 888888875
No 286
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.16 E-value=1.2e-10 Score=104.16 Aligned_cols=85 Identities=28% Similarity=0.290 Sum_probs=51.8
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFSVESF 88 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~~ 88 (470)
++|++|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|.|++.++.. ..+++|+.|++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 45666666666666554445566666666666666666444444566666666666666666555442 45666666666
Q ss_pred cCCccc
Q 040392 89 EGNELL 94 (470)
Q Consensus 89 ~~n~~~ 94 (470)
++|.+.
T Consensus 108 ~~N~l~ 113 (208)
T 2o6s_A 108 NTNQLQ 113 (208)
T ss_dssp CSSCCC
T ss_pred CCCcCc
Confidence 666654
No 287
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.16 E-value=5e-11 Score=120.02 Aligned_cols=92 Identities=27% Similarity=0.256 Sum_probs=51.9
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC-CCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP-RGGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~ 81 (470)
|..|+++++|+.|+|++|++++..|..|.++++|+.|+|++|.+++..|..+..+++|+.|++++|.|++.++ .+..++
T Consensus 292 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 371 (455)
T 3v47_A 292 KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLP 371 (455)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred hhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccc
Confidence 4455556666666666666665555555556666666666666655445555555556666666655554433 234555
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|++.
T Consensus 372 ~L~~L~L~~N~l~ 384 (455)
T 3v47_A 372 NLKELALDTNQLK 384 (455)
T ss_dssp TCCEEECCSSCCS
T ss_pred cccEEECCCCccc
Confidence 5555555555553
No 288
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.14 E-value=7.5e-11 Score=113.47 Aligned_cols=93 Identities=19% Similarity=0.171 Sum_probs=47.3
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l 80 (470)
+|.+|+++++|+.|+|++|.++ .+|+.+..+++|+.|+|++|.+.+.+|..+..+++|+.|++++|.+.+.+|. +..+
T Consensus 198 lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l 276 (328)
T 4fcg_A 198 LPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRL 276 (328)
T ss_dssp CCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGC
T ss_pred chHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcC
Confidence 3444555555555555555555 2344455555555555555555555555555555555555555544443332 3445
Q ss_pred CCCccccccCCcccc
Q 040392 81 RNFSVESFEGNELLC 95 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~ 95 (470)
++|+.|++++|++..
T Consensus 277 ~~L~~L~L~~n~~~~ 291 (328)
T 4fcg_A 277 TQLEKLDLRGCVNLS 291 (328)
T ss_dssp TTCCEEECTTCTTCC
T ss_pred CCCCEEeCCCCCchh
Confidence 555555555555443
No 289
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.14 E-value=5.8e-11 Score=122.58 Aligned_cols=91 Identities=25% Similarity=0.322 Sum_probs=81.5
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCcccccc--CCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGE--IPRGGP 79 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~--~~~~~~ 79 (470)
+|. |++|++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .+..+++|+.|+|++|.|++. +..+..
T Consensus 456 lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~ 531 (567)
T 1dce_A 456 LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVS 531 (567)
T ss_dssp CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGG
T ss_pred CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhc
Confidence 565 889999999999999999 889999999999999999999995 77 799999999999999999988 556788
Q ss_pred CCCCccccccCCccccC
Q 040392 80 FRNFSVESFEGNELLCG 96 (470)
Q Consensus 80 l~~l~~l~~~~n~~~~~ 96 (470)
+++|+.|++++|++...
T Consensus 532 l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 532 CPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp CTTCCEEECTTSGGGGS
T ss_pred CCCCCEEEecCCcCCCC
Confidence 99999999999998543
No 290
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.14 E-value=2e-11 Score=116.76 Aligned_cols=97 Identities=35% Similarity=0.678 Sum_probs=82.7
Q ss_pred CCcccCCCCCCcEeeCcC-CcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCC
Q 040392 2 IPTEIGGLKNLEYLFLGY-NRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGP 79 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~-n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~ 79 (470)
+|..|.++++|+.|+|++ |.+++.+|..|.++++|++|+|++|.+++.+|..+..+++|+.|++++|.|++.+|. +..
T Consensus 68 ~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 147 (313)
T 1ogq_A 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS 147 (313)
T ss_dssp CCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred cChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhc
Confidence 678888999999999994 888888899999999999999999999888888899999999999999999865554 577
Q ss_pred CCCCccccccCCccccCCC
Q 040392 80 FRNFSVESFEGNELLCGSP 98 (470)
Q Consensus 80 l~~l~~l~~~~n~~~~~~~ 98 (470)
+++|+.|++++|.+....|
T Consensus 148 l~~L~~L~L~~N~l~~~~p 166 (313)
T 1ogq_A 148 LPNLVGITFDGNRISGAIP 166 (313)
T ss_dssp CTTCCEEECCSSCCEEECC
T ss_pred CCCCCeEECcCCcccCcCC
Confidence 8899999999998764433
No 291
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.13 E-value=1.6e-10 Score=112.58 Aligned_cols=142 Identities=13% Similarity=0.167 Sum_probs=106.5
Q ss_pred CCCeecccCceEEEEEEeCCCcEEEEEEee--ccc-chhhhhHHHHHHHHhcCC--CCcceeEEeeeccC---CeeeEEE
Q 040392 177 ENNLIGRGGFGSVYKARLGDGMEVAVKVFN--LQC-GRALKGFDVECEMMKSIR--HRNLIKVISTCSNE---EFKALVL 248 (470)
Q Consensus 177 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~---~~~~lv~ 248 (470)
..+.|+.|.++.||+.... +..+++|+.. ... ......+..|+++++.+. +..+.+++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 3567899999999999875 4678888765 321 123457788999999987 45678899988766 4578999
Q ss_pred ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 040392 249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY-------------------------------------- 290 (470)
Q Consensus 249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-------------------------------------- 290 (470)
||++|.++.+.. -..++...+..++.++++.|..||...
T Consensus 121 e~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 121 EFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp ECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred EecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 999998874422 123678888899999999999999520
Q ss_pred -----------------CCCeeecCCCCCCeeeCCCCC--eEEeeeccccc
Q 040392 291 -----------------SAPIIHCDLKPSNVLLDDNMV--AHLSDFSIAKL 322 (470)
Q Consensus 291 -----------------~~~i~H~dlkp~Nill~~~~~--~kl~Dfg~a~~ 322 (470)
...++|||+++.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997753 68999998864
No 292
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.12 E-value=2.3e-10 Score=99.54 Aligned_cols=94 Identities=23% Similarity=0.257 Sum_probs=83.7
Q ss_pred cccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCC
Q 040392 4 TEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRN 82 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~ 82 (470)
..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|++++|.|++.++.. ..+++
T Consensus 46 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 125 (177)
T 2o6r_A 46 GVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTS 125 (177)
T ss_dssp TTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred HHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcc
Confidence 35689999999999999999776677899999999999999999777777899999999999999999877765 67999
Q ss_pred CccccccCCccccCC
Q 040392 83 FSVESFEGNELLCGS 97 (470)
Q Consensus 83 l~~l~~~~n~~~~~~ 97 (470)
|+.+++++|++.|..
T Consensus 126 L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 126 LQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCEEECCSSCBCCCH
T ss_pred cCEEEecCCCeeccC
Confidence 999999999997743
No 293
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.12 E-value=6.8e-11 Score=125.80 Aligned_cols=91 Identities=29% Similarity=0.322 Sum_probs=61.9
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
+|..+++|++|+.|+|++|.|+ .+|..|.+|++|+.|+|++|.|+ .+|..|..|++|+.|+|++|.|+..+..+..++
T Consensus 239 l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~ 316 (727)
T 4b8c_D 239 ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLC 316 (727)
T ss_dssp CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCT
T ss_pred CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCC
Confidence 4556666677777777777776 66666667777777777777777 666667777777777777777765555566667
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|++.
T Consensus 317 ~L~~L~L~~N~l~ 329 (727)
T 4b8c_D 317 NLQFLGVEGNPLE 329 (727)
T ss_dssp TCCCEECTTSCCC
T ss_pred CccEEeCCCCccC
Confidence 7777777777653
No 294
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.11 E-value=1.2e-10 Score=110.85 Aligned_cols=93 Identities=29% Similarity=0.371 Sum_probs=54.5
Q ss_pred CcccCCCCCCcEeeCcCCcCCC-CCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC-CCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQG-PIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP-RGGPF 80 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~-~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l 80 (470)
|..|.++++|+.|+|++|.+++ .+|..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+++.++ .+..+
T Consensus 143 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 222 (306)
T 2z66_A 143 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 222 (306)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTC
T ss_pred hhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCc
Confidence 3445556666666666666654 345556666666666666666665555556666666666666666654443 23455
Q ss_pred CCCccccccCCcccc
Q 040392 81 RNFSVESFEGNELLC 95 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~ 95 (470)
++|+.|++++|++..
T Consensus 223 ~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 223 NSLQVLDYSLNHIMT 237 (306)
T ss_dssp TTCCEEECTTSCCCB
T ss_pred ccCCEeECCCCCCcc
Confidence 566666666666543
No 295
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.11 E-value=2.4e-10 Score=106.85 Aligned_cols=90 Identities=31% Similarity=0.349 Sum_probs=69.1
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l 83 (470)
.+.++++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..+..+++|+.|++++|.|++.++.. ..+++|
T Consensus 80 ~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 159 (272)
T 3rfs_A 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNL 159 (272)
T ss_dssp GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccC
Confidence 5677788888888888888666666777888888888888888666666777888888888888887666654 567788
Q ss_pred ccccccCCccc
Q 040392 84 SVESFEGNELL 94 (470)
Q Consensus 84 ~~l~~~~n~~~ 94 (470)
+.|++++|.+.
T Consensus 160 ~~L~l~~n~l~ 170 (272)
T 3rfs_A 160 TELDLSYNQLQ 170 (272)
T ss_dssp CEEECCSSCCC
T ss_pred CEEECCCCCcC
Confidence 88888888765
No 296
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.10 E-value=6.7e-11 Score=111.38 Aligned_cols=92 Identities=29% Similarity=0.336 Sum_probs=71.4
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC-CCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP-RGGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~ 81 (470)
|..|.++++|+.|+|++|.+++..+..|.++++|+.|+|++|+|++..+..+..+++|+.|++++|.+++..+ .+..++
T Consensus 122 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 201 (285)
T 1ozn_A 122 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG 201 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred HhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcc
Confidence 5567788888888888888886666667888888888888888885555568888888888888888877644 446677
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|.+.
T Consensus 202 ~L~~L~l~~n~l~ 214 (285)
T 1ozn_A 202 RLMTLYLFANNLS 214 (285)
T ss_dssp TCCEEECCSSCCS
T ss_pred cccEeeCCCCcCC
Confidence 8888888888764
No 297
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.10 E-value=7.3e-11 Score=101.79 Aligned_cols=91 Identities=24% Similarity=0.173 Sum_probs=80.8
Q ss_pred cccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCc-ccccCCCCCCceecCCccccccCC----CCC
Q 040392 4 TEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIP-ASLEKLSYLENLNLSFNKLEGEIP----RGG 78 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~-~~~~~l~~L~~l~l~~N~l~~~~~----~~~ 78 (470)
..|.++++|++|+|++|++++.+|..+.++++|+.|+|++|.|++..+ ..+..+++|+.|++++|.+++.++ .+.
T Consensus 65 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 144 (168)
T 2ell_A 65 SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFK 144 (168)
T ss_dssp SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHT
T ss_pred hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHH
Confidence 467889999999999999998788888889999999999999995322 789999999999999999997776 467
Q ss_pred CCCCCccccccCCccc
Q 040392 79 PFRNFSVESFEGNELL 94 (470)
Q Consensus 79 ~l~~l~~l~~~~n~~~ 94 (470)
.+++|+.|++.+|.+.
T Consensus 145 ~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 145 LLPQLTYLDGYDREDQ 160 (168)
T ss_dssp TCSSCCEETTEETTSC
T ss_pred hCccCcEecCCCCChh
Confidence 8999999999999874
No 298
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.09 E-value=6.9e-11 Score=104.88 Aligned_cols=88 Identities=20% Similarity=0.299 Sum_probs=44.5
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCcc-ccccCCCCCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNK-LEGEIPRGGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~-l~~~~~~~~~l~~l 83 (470)
.+.++++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|. ++ .++.+..+++|
T Consensus 83 ~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~~l~~l~~L 161 (197)
T 4ezg_A 83 PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIMPLKTLPEL 161 (197)
T ss_dssp GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCGGGGGCSSC
T ss_pred hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccHhhcCCCCC
Confidence 44445555555555555554444455555555555555555554444445555555555555554 33 23334445555
Q ss_pred ccccccCCcc
Q 040392 84 SVESFEGNEL 93 (470)
Q Consensus 84 ~~l~~~~n~~ 93 (470)
+.|++++|++
T Consensus 162 ~~L~l~~n~i 171 (197)
T 4ezg_A 162 KSLNIQFDGV 171 (197)
T ss_dssp CEEECTTBCC
T ss_pred CEEECCCCCC
Confidence 5555555544
No 299
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.09 E-value=5.7e-11 Score=114.32 Aligned_cols=92 Identities=22% Similarity=0.313 Sum_probs=57.5
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccC---------CCCCCceecCCccccc
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEK---------LSYLENLNLSFNKLEG 72 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~---------l~~L~~l~l~~N~l~~ 72 (470)
+|..|+++++|++|+|++|.++ .+|..+.++++|+.|+|++|.+.+.+|..+.. +++|+.|++++|.|+.
T Consensus 119 lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 197 (328)
T 4fcg_A 119 LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRS 197 (328)
T ss_dssp CCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCC
T ss_pred hhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCc
Confidence 5666667777777777777776 66666666777777777666666566655443 6666666666666654
Q ss_pred cCCCCCCCCCCccccccCCccc
Q 040392 73 EIPRGGPFRNFSVESFEGNELL 94 (470)
Q Consensus 73 ~~~~~~~l~~l~~l~~~~n~~~ 94 (470)
.+..+..+++|+.|++++|.+.
T Consensus 198 lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 198 LPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp CCGGGGGCTTCCEEEEESSCCC
T ss_pred chHhhcCCCCCCEEEccCCCCC
Confidence 4444455556666666665553
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.09 E-value=1.3e-10 Score=116.56 Aligned_cols=90 Identities=23% Similarity=0.261 Sum_probs=50.6
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFS 84 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~ 84 (470)
+.++++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++.. ..+++|+
T Consensus 203 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 282 (440)
T 3zyj_A 203 LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLE 282 (440)
T ss_dssp CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCC
T ss_pred cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCC
Confidence 344455555555555555444555555555555555555555555555555666666666666665544433 4455666
Q ss_pred cccccCCcccc
Q 040392 85 VESFEGNELLC 95 (470)
Q Consensus 85 ~l~~~~n~~~~ 95 (470)
.|++++|++.|
T Consensus 283 ~L~L~~Np~~C 293 (440)
T 3zyj_A 283 RIHLHHNPWNC 293 (440)
T ss_dssp EEECCSSCEEC
T ss_pred EEEcCCCCccC
Confidence 66666666655
No 301
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.08 E-value=1.3e-10 Score=121.82 Aligned_cols=92 Identities=17% Similarity=0.112 Sum_probs=67.9
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~ 81 (470)
|.+|.+|++|++|+|++|+|++..|.+|.++++|++|+|++|+|++..+..|..+++|+.|++++|.|++.++. +..++
T Consensus 69 ~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~ 148 (635)
T 4g8a_A 69 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLK 148 (635)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCT
T ss_pred HHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCc
Confidence 34677777888888888887766666777788888888888887755556677788888888888877766554 46777
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|.+.
T Consensus 149 ~L~~L~Ls~N~l~ 161 (635)
T 4g8a_A 149 TLKELNVAHNLIQ 161 (635)
T ss_dssp TCCEEECCSSCCC
T ss_pred ccCeeccccCccc
Confidence 7777777777764
No 302
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.08 E-value=1.1e-10 Score=113.76 Aligned_cols=91 Identities=23% Similarity=0.158 Sum_probs=73.6
Q ss_pred ccC-CCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCC
Q 040392 5 EIG-GLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRN 82 (470)
Q Consensus 5 ~~~-~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~ 82 (470)
.+. ++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.|++..+. +..+++
T Consensus 58 ~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 137 (361)
T 2xot_A 58 WTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQ 137 (361)
T ss_dssp SSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTT
T ss_pred hhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCccc
Confidence 455 788888999999988877667788888889999988888866666788888888888888888866543 467888
Q ss_pred CccccccCCcccc
Q 040392 83 FSVESFEGNELLC 95 (470)
Q Consensus 83 l~~l~~~~n~~~~ 95 (470)
|+.|++++|.+..
T Consensus 138 L~~L~L~~N~l~~ 150 (361)
T 2xot_A 138 LQKLYLSQNQISR 150 (361)
T ss_dssp CCEEECCSSCCCS
T ss_pred CCEEECCCCcCCe
Confidence 8888888888753
No 303
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.08 E-value=9.4e-11 Score=104.02 Aligned_cols=89 Identities=19% Similarity=0.251 Sum_probs=79.2
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCc-CCCCCcccccCCCCCCceecCCccccccCCCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNN-LSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~-i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l 80 (470)
.|..|+++++|+.|+|++|++++..|..+..+++|+.|+|++|. ++ .+| .+..+++|+.|++++|.|++ ++.+..+
T Consensus 104 ~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~~l~~l 180 (197)
T 4ezg_A 104 KIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YRGIEDF 180 (197)
T ss_dssp GSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CTTGGGC
T ss_pred cChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hHHhccC
Confidence 47788999999999999999998788999999999999999998 76 666 69999999999999999996 4477889
Q ss_pred CCCccccccCCcc
Q 040392 81 RNFSVESFEGNEL 93 (470)
Q Consensus 81 ~~l~~l~~~~n~~ 93 (470)
++|+.|++.+|++
T Consensus 181 ~~L~~L~l~~N~i 193 (197)
T 4ezg_A 181 PKLNQLYAFSQTI 193 (197)
T ss_dssp SSCCEEEECBC--
T ss_pred CCCCEEEeeCccc
Confidence 9999999999997
No 304
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.07 E-value=1.2e-10 Score=121.59 Aligned_cols=94 Identities=26% Similarity=0.288 Sum_probs=56.3
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC-
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR- 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~- 81 (470)
|..|+++++|+.|+|++|++++..|..+.++++|+.|+|++|++++..|..+..+++|+.|++++|+|+..++.+..++
T Consensus 466 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~ 545 (606)
T 3vq2_A 466 SNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPK 545 (606)
T ss_dssp CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCT
T ss_pred HHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcc
Confidence 4455566666666666666665555556666666666666666665555666666666666666666664444444443
Q ss_pred CCccccccCCccccC
Q 040392 82 NFSVESFEGNELLCG 96 (470)
Q Consensus 82 ~l~~l~~~~n~~~~~ 96 (470)
+|+.+++++|++.|.
T Consensus 546 ~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 546 SLAFFNLTNNSVACI 560 (606)
T ss_dssp TCCEEECCSCCCCCS
T ss_pred cCcEEEccCCCcccC
Confidence 466666666666553
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.05 E-value=2.2e-10 Score=115.37 Aligned_cols=88 Identities=30% Similarity=0.276 Sum_probs=40.9
Q ss_pred CCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCccc
Q 040392 8 GLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFSVE 86 (470)
Q Consensus 8 ~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l 86 (470)
.+++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.|++.++.. ..+++|+.|
T Consensus 216 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 295 (452)
T 3zyi_A 216 PLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVEL 295 (452)
T ss_dssp TCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEE
T ss_pred ccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEE
Confidence 3344444444444444444444444444444444444444444444444455555555555544433332 334455555
Q ss_pred cccCCcccc
Q 040392 87 SFEGNELLC 95 (470)
Q Consensus 87 ~~~~n~~~~ 95 (470)
++++|++.|
T Consensus 296 ~L~~Np~~C 304 (452)
T 3zyi_A 296 HLHHNPWNC 304 (452)
T ss_dssp ECCSSCEEC
T ss_pred EccCCCcCC
Confidence 555555544
No 306
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.04 E-value=1.8e-10 Score=100.25 Aligned_cols=83 Identities=14% Similarity=0.135 Sum_probs=38.3
Q ss_pred CCCCCCcEeeCcCCcCCCCCCccccCCC-CCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCc
Q 040392 7 GGLKNLEYLFLGYNRLQGPIPDSFGDLI-SLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFS 84 (470)
Q Consensus 7 ~~l~~l~~l~l~~n~l~~~~p~~~~~l~-~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~ 84 (470)
.++.+|+.|+|++|+++ .+|. +..+. +|+.|+|++|.|++. ..+..+++|+.|++++|.|++.++.. ..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 34445555555555555 2222 22222 455555555555532 33444555555555555554443333 3444555
Q ss_pred cccccCCcc
Q 040392 85 VESFEGNEL 93 (470)
Q Consensus 85 ~l~~~~n~~ 93 (470)
.|++++|.+
T Consensus 92 ~L~L~~N~i 100 (176)
T 1a9n_A 92 ELILTNNSL 100 (176)
T ss_dssp EEECCSCCC
T ss_pred EEECCCCcC
Confidence 555555544
No 307
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.04 E-value=1.1e-10 Score=126.72 Aligned_cols=90 Identities=31% Similarity=0.415 Sum_probs=76.3
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRN 82 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~ 82 (470)
|..|.++++|+.|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+. ++|+.|++++|+|++.+|.. +.+
T Consensus 473 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~ 548 (844)
T 3j0a_A 473 WDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVS 548 (844)
T ss_dssp SSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSS
T ss_pred hhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCC
Confidence 34577889999999999999988888889999999999999999966555554 88999999999999888764 568
Q ss_pred CccccccCCccccC
Q 040392 83 FSVESFEGNELLCG 96 (470)
Q Consensus 83 l~~l~~~~n~~~~~ 96 (470)
|+.+++++|++.|.
T Consensus 549 L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 549 LSVLDITHNKFICE 562 (844)
T ss_dssp CCEEEEEEECCCCS
T ss_pred cCEEEecCCCcccc
Confidence 99999999999884
No 308
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.04 E-value=6.9e-10 Score=103.56 Aligned_cols=91 Identities=27% Similarity=0.325 Sum_probs=76.2
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l 83 (470)
.|.++++|+.|+|++|.+++..+..|.++++|+.|+|++|.+++..+..|..+++|+.|++++|.|++.++. +..+++|
T Consensus 80 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 159 (270)
T 2o6q_A 80 IFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159 (270)
T ss_dssp TTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred hhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCccc
Confidence 357789999999999999876666778899999999999999977777788899999999999999877665 4678899
Q ss_pred ccccccCCcccc
Q 040392 84 SVESFEGNELLC 95 (470)
Q Consensus 84 ~~l~~~~n~~~~ 95 (470)
+.|++++|.+..
T Consensus 160 ~~L~L~~n~l~~ 171 (270)
T 2o6q_A 160 KELRLYNNQLKR 171 (270)
T ss_dssp CEEECCSSCCSC
T ss_pred ceeEecCCcCcE
Confidence 999999988754
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.04 E-value=5e-10 Score=105.35 Aligned_cols=92 Identities=27% Similarity=0.251 Sum_probs=75.2
Q ss_pred CcccCCCCCCcEeeCcCCc-CCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNR-LQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPF 80 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~-l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l 80 (470)
|..|.++++|+.|+|++|. ++...|..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|.+++.++. +..+
T Consensus 73 ~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 152 (285)
T 1ozn_A 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDL 152 (285)
T ss_dssp TTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred HhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccC
Confidence 5678888888888888887 7766677888888888888888888877777888888888888888888876665 4678
Q ss_pred CCCccccccCCccc
Q 040392 81 RNFSVESFEGNELL 94 (470)
Q Consensus 81 ~~l~~l~~~~n~~~ 94 (470)
++|+.|++++|.+.
T Consensus 153 ~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 153 GNLTHLFLHGNRIS 166 (285)
T ss_dssp TTCCEEECCSSCCC
T ss_pred CCccEEECCCCccc
Confidence 88888888888774
No 310
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.01 E-value=1.2e-10 Score=98.22 Aligned_cols=87 Identities=22% Similarity=0.160 Sum_probs=75.8
Q ss_pred cccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCC-CcccccCCCCCCceecCCccccccCC----CCC
Q 040392 4 TEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGA-IPASLEKLSYLENLNLSFNKLEGEIP----RGG 78 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~----~~~ 78 (470)
..++++++|+.|+|++|.+++.+|..+..+++|+.|+|++|.|++. .+..+..+++|+.|++++|.+++.++ .+.
T Consensus 58 ~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 137 (149)
T 2je0_A 58 ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFK 137 (149)
T ss_dssp TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHH
T ss_pred hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHH
Confidence 4678899999999999999987888888899999999999999953 34789999999999999999997766 356
Q ss_pred CCCCCccccccC
Q 040392 79 PFRNFSVESFEG 90 (470)
Q Consensus 79 ~l~~l~~l~~~~ 90 (470)
.+++|+.|++++
T Consensus 138 ~l~~L~~L~l~d 149 (149)
T 2je0_A 138 LLPQLTYLDGYD 149 (149)
T ss_dssp HCTTCCEETTBC
T ss_pred HCCCcccccCCC
Confidence 788999888753
No 311
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.01 E-value=3.8e-10 Score=110.03 Aligned_cols=92 Identities=22% Similarity=0.164 Sum_probs=70.7
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCcccc-CCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFG-DLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGP 79 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~-~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~ 79 (470)
+|..+. +.++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. +..
T Consensus 33 iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 110 (361)
T 2xot_A 33 VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSD 110 (361)
T ss_dssp CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCC
Confidence 454443 3578888888888866666676 788888888888888866667788888888888888888866664 467
Q ss_pred CCCCccccccCCcccc
Q 040392 80 FRNFSVESFEGNELLC 95 (470)
Q Consensus 80 l~~l~~l~~~~n~~~~ 95 (470)
+++|+.|++++|.+..
T Consensus 111 l~~L~~L~L~~N~i~~ 126 (361)
T 2xot_A 111 LQALEVLLLYNNHIVV 126 (361)
T ss_dssp CTTCCEEECCSSCCCE
T ss_pred CcCCCEEECCCCcccE
Confidence 8888888888888754
No 312
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.99 E-value=4.1e-10 Score=116.58 Aligned_cols=92 Identities=29% Similarity=0.386 Sum_probs=44.7
Q ss_pred ccCCCCCCcEeeCcCCcCC-CCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQ-GPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRN 82 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~-~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~ 82 (470)
.|.++++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+++|+.|++++|.|++.++. +..+++
T Consensus 440 ~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 519 (570)
T 2z63_A 440 IFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTS 519 (570)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred hhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccC
Confidence 3444444444444444444 23444444455555555555555544444455555555555555555544433 244455
Q ss_pred CccccccCCccccC
Q 040392 83 FSVESFEGNELLCG 96 (470)
Q Consensus 83 l~~l~~~~n~~~~~ 96 (470)
|+.+++++|++.|.
T Consensus 520 L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 520 LQKIWLHTNPWDCS 533 (570)
T ss_dssp CCEEECCSSCBCCC
T ss_pred CcEEEecCCcccCC
Confidence 55555555555443
No 313
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.99 E-value=6.4e-10 Score=104.09 Aligned_cols=85 Identities=20% Similarity=0.116 Sum_probs=56.1
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCCccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNFSVESF 88 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~ 88 (470)
++|+.|+|++|++++..+..|.++++|+.|+|++|.+++..+..+..+++|+.|++++|.|++.++. +..+++|+.|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 4567777777777755555666677777777777777655555666777777777777777655543 456667777777
Q ss_pred cCCccc
Q 040392 89 EGNELL 94 (470)
Q Consensus 89 ~~n~~~ 94 (470)
++|.+.
T Consensus 108 ~~n~l~ 113 (276)
T 2z62_A 108 VETNLA 113 (276)
T ss_dssp TTSCCC
T ss_pred CCCCcc
Confidence 766653
No 314
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.99 E-value=6e-10 Score=112.03 Aligned_cols=96 Identities=25% Similarity=0.230 Sum_probs=84.0
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~ 81 (470)
|..|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..|..+..+++|+.|++++|.|++.++.. ..++
T Consensus 316 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 395 (455)
T 3v47_A 316 DNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLT 395 (455)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCT
T ss_pred hhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCC
Confidence 667888999999999999998777888899999999999999999777888999999999999999999777654 6788
Q ss_pred CCccccccCCccccCCC
Q 040392 82 NFSVESFEGNELLCGSP 98 (470)
Q Consensus 82 ~l~~l~~~~n~~~~~~~ 98 (470)
+|+.+++++|++.|.-|
T Consensus 396 ~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 396 SLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TCCEEECCSSCBCCCTT
T ss_pred cccEEEccCCCcccCCC
Confidence 99999999999988655
No 315
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.99 E-value=4.3e-10 Score=106.91 Aligned_cols=90 Identities=24% Similarity=0.322 Sum_probs=62.7
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCC-CCcccccCCCCCCceecCCccccccCCC-CCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSG-AIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRN 82 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~-~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~ 82 (470)
.+.++++|+.|+|++|.+++..|..+.++++|+.|+|++|.+++ .+|..+..+++|+.|++++|.|++.++. +..+++
T Consensus 121 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 200 (306)
T 2z66_A 121 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 200 (306)
T ss_dssp TTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCC
Confidence 56667777777777777776666667777777777777777765 4666677777777777777777765443 456677
Q ss_pred CccccccCCccc
Q 040392 83 FSVESFEGNELL 94 (470)
Q Consensus 83 l~~l~~~~n~~~ 94 (470)
|+.|++++|.+.
T Consensus 201 L~~L~L~~N~l~ 212 (306)
T 2z66_A 201 LQVLNMSHNNFF 212 (306)
T ss_dssp CCEEECTTSCCS
T ss_pred CCEEECCCCccC
Confidence 777777777664
No 316
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.98 E-value=1.8e-10 Score=100.12 Aligned_cols=88 Identities=19% Similarity=0.140 Sum_probs=74.8
Q ss_pred cCCCC-CCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC--CCCCCCC
Q 040392 6 IGGLK-NLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP--RGGPFRN 82 (470)
Q Consensus 6 ~~~l~-~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~--~~~~l~~ 82 (470)
+..+. +|+.|+|++|.|++. +.+..+++|+.|+|++|.|++..+..+..+++|+.|++++|.|+..++ .+..+++
T Consensus 37 ~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~ 114 (176)
T 1a9n_A 37 LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKS 114 (176)
T ss_dssp GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTT
T ss_pred hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCC
Confidence 44444 999999999999965 689999999999999999995544556899999999999999986554 5678999
Q ss_pred CccccccCCcccc
Q 040392 83 FSVESFEGNELLC 95 (470)
Q Consensus 83 l~~l~~~~n~~~~ 95 (470)
|+.+++++|++..
T Consensus 115 L~~L~l~~N~i~~ 127 (176)
T 1a9n_A 115 LTYLCILRNPVTN 127 (176)
T ss_dssp CCEEECCSSGGGG
T ss_pred CCEEEecCCCCCC
Confidence 9999999999853
No 317
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=98.97 E-value=1.1e-09 Score=94.67 Aligned_cols=74 Identities=24% Similarity=0.264 Sum_probs=66.7
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR 76 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 76 (470)
|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.++...+.
T Consensus 47 ~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 47 PGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp TTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred hhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 67789999999999999999977777789999999999999999976667799999999999999999876653
No 318
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.97 E-value=2.4e-10 Score=108.67 Aligned_cols=187 Identities=18% Similarity=0.173 Sum_probs=121.9
Q ss_pred CCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CCc--ceeEEeeeccCC---eeeEEEecC
Q 040392 178 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRN--LIKVISTCSNEE---FKALVLEYM 251 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--Iv~~~~~~~~~~---~~~lv~e~~ 251 (470)
.+.++.|....||++. ..+++|..... .....+..|+++++.+. +.. +.+++....... ..++|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4678999999999873 46889986432 34567888999998873 332 455665554333 457899999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 040392 252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG------------------------------------------ 289 (470)
Q Consensus 252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~------------------------------------------ 289 (470)
+|.++.+... ..++..++..++.++++.+..||..
T Consensus 99 ~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 9988865332 2356777788888888888888841
Q ss_pred -------------CCCCeeecCCCCCCeeeCC--CCCeEEeeeccccccCCCCCcccccc-------------cccCccc
Q 040392 290 -------------YSAPIIHCDLKPSNVLLDD--NMVAHLSDFSIAKLLTGEDQSMTQTQ-------------TLATIGY 341 (470)
Q Consensus 290 -------------~~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~-------------~~~t~~y 341 (470)
....++|+|++|.||++++ +..+.++||+.+..-.+ ........ .....+.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~-~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP-DNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT-THHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh-HHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 0135899999999999998 56689999998864321 00000000 0000011
Q ss_pred cC-ccccCCCCCCCccchhhHHHHHHHHHhCCCCCC
Q 040392 342 MA-PEYGREGRVSTNGDVYSFGIMLMETFTGKKPTN 376 (470)
Q Consensus 342 ~a-PE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~ 376 (470)
.. |+... ......+.|++|.++|.+.+|..+|-
T Consensus 255 ~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 255 KDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp SCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 11 12111 11123689999999999999987753
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.96 E-value=7.8e-10 Score=103.48 Aligned_cols=93 Identities=17% Similarity=0.120 Sum_probs=81.5
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC-CCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP-RGGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~ 81 (470)
+..|.++++|+.|+|++|++++..+..|.++++|++|+|++|.+++..+..+..+++|+.|++++|.+++..+ .+..++
T Consensus 45 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 124 (276)
T 2z62_A 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLK 124 (276)
T ss_dssp TTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCT
T ss_pred HhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCC
Confidence 3478889999999999999997777789999999999999999997777889999999999999999987666 467889
Q ss_pred CCccccccCCcccc
Q 040392 82 NFSVESFEGNELLC 95 (470)
Q Consensus 82 ~l~~l~~~~n~~~~ 95 (470)
+|+.|++++|.+..
T Consensus 125 ~L~~L~l~~n~l~~ 138 (276)
T 2z62_A 125 TLKELNVAHNLIQS 138 (276)
T ss_dssp TCCEEECCSSCCCC
T ss_pred CCCEEECcCCccce
Confidence 99999999998753
No 320
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.96 E-value=1.7e-10 Score=121.20 Aligned_cols=93 Identities=15% Similarity=0.268 Sum_probs=70.2
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCC-----------------CCcccc--CCCCCCEEeccCCcCCCCCcccccCCCCCCc
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGP-----------------IPDSFG--DLISLKFLNLSNNNLSGAIPASLEKLSYLEN 62 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~-----------------~p~~~~--~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~ 62 (470)
+|.+|+++++|+.|+|++|.++|. +|+.++ ++++|++|+|++|.++|.+|..+..+++|+.
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~ 277 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQL 277 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCE
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCE
Confidence 577788888888888888888864 777777 8888888888888888788888888888888
Q ss_pred eecCCcc-ccc-cCC-CCCCC------CCCccccccCCccc
Q 040392 63 LNLSFNK-LEG-EIP-RGGPF------RNFSVESFEGNELL 94 (470)
Q Consensus 63 l~l~~N~-l~~-~~~-~~~~l------~~l~~l~~~~n~~~ 94 (470)
|++++|. +++ .+| .++.+ ++|+.|++++|.+.
T Consensus 278 L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 278 INVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred EECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 8888887 776 333 23333 77777777777765
No 321
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.95 E-value=1.5e-09 Score=113.08 Aligned_cols=89 Identities=17% Similarity=0.137 Sum_probs=56.0
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFS 84 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~ 84 (470)
|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|.|++..|..|..+++|+.|++++|.|++.++.. ..+++|+
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 150 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 150 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCC
Confidence 345666666666666666555556666666666666666666555555666666666666666666555543 5566666
Q ss_pred cccccCCccc
Q 040392 85 VESFEGNELL 94 (470)
Q Consensus 85 ~l~~~~n~~~ 94 (470)
.|++++|.+.
T Consensus 151 ~L~Ls~N~l~ 160 (597)
T 3oja_B 151 TLSMSNNNLE 160 (597)
T ss_dssp EEECCSSCCC
T ss_pred EEEeeCCcCC
Confidence 6666666654
No 322
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.95 E-value=1.5e-09 Score=94.08 Aligned_cols=75 Identities=25% Similarity=0.335 Sum_probs=66.1
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG 77 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 77 (470)
|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+....+.+
T Consensus 50 ~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 50 PGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred HHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 678899999999999999999766666799999999999999999665566999999999999999998766543
No 323
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.94 E-value=1e-09 Score=106.60 Aligned_cols=87 Identities=28% Similarity=0.197 Sum_probs=41.3
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC--CCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP--RGGPFRN 82 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~--~~~~l~~ 82 (470)
.|.++++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..+..+++|+.|++++|.+++.+. .+..+++
T Consensus 71 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~ 150 (353)
T 2z80_A 71 DLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTK 150 (353)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTT
T ss_pred HhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCC
Confidence 34445555555555555554444445555555555555555553222234445555555555555543333 2344455
Q ss_pred CccccccCC
Q 040392 83 FSVESFEGN 91 (470)
Q Consensus 83 l~~l~~~~n 91 (470)
|+.|++++|
T Consensus 151 L~~L~l~~n 159 (353)
T 2z80_A 151 LQILRVGNM 159 (353)
T ss_dssp CCEEEEEES
T ss_pred CcEEECCCC
Confidence 555555544
No 324
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.94 E-value=6e-10 Score=112.86 Aligned_cols=91 Identities=25% Similarity=0.331 Sum_probs=70.1
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l 83 (470)
.|.++++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..|..+++|+.|++++|.|++.++.. ..+++|
T Consensus 243 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 322 (477)
T 2id5_A 243 AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNL 322 (477)
T ss_dssp HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGC
T ss_pred HhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCccc
Confidence 4567778888888888887666667777888888888888888777777888888888888888887666543 567788
Q ss_pred ccccccCCcccc
Q 040392 84 SVESFEGNELLC 95 (470)
Q Consensus 84 ~~l~~~~n~~~~ 95 (470)
+.|++++|++.|
T Consensus 323 ~~L~l~~N~l~c 334 (477)
T 2id5_A 323 ETLILDSNPLAC 334 (477)
T ss_dssp CEEECCSSCEEC
T ss_pred CEEEccCCCccC
Confidence 888888888876
No 325
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.94 E-value=9.7e-10 Score=113.30 Aligned_cols=93 Identities=27% Similarity=0.242 Sum_probs=69.5
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccc--cCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEG--EIPRGGPF 80 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~--~~~~~~~l 80 (470)
|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..+..+++|+.|++++|.+++ .++.+..+
T Consensus 43 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l 122 (549)
T 2z81_A 43 HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNL 122 (549)
T ss_dssp SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTC
T ss_pred hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhcc
Confidence 5567778888888888888887767778888888888888888886666667788888888888888774 23455677
Q ss_pred CCCccccccCCcccc
Q 040392 81 RNFSVESFEGNELLC 95 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~ 95 (470)
++|+.|++++|....
T Consensus 123 ~~L~~L~L~~n~~~~ 137 (549)
T 2z81_A 123 TNLQTLRIGNVETFS 137 (549)
T ss_dssp TTCCEEEEEESSSCC
T ss_pred CCccEEECCCCcccc
Confidence 778888887776433
No 326
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.94 E-value=2.2e-09 Score=105.77 Aligned_cols=90 Identities=17% Similarity=0.128 Sum_probs=65.3
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFS 84 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~ 84 (470)
|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|.+++..|..+..+++|+.|++++|.|+..++.. ..+++|+
T Consensus 65 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 456777777777777777666667777777777777777777666666777777777777777777655554 5677777
Q ss_pred cccccCCcccc
Q 040392 85 VESFEGNELLC 95 (470)
Q Consensus 85 ~l~~~~n~~~~ 95 (470)
.|++++|.+..
T Consensus 145 ~L~L~~n~l~~ 155 (390)
T 3o6n_A 145 TLSMSNNNLER 155 (390)
T ss_dssp EEECCSSCCCB
T ss_pred EEECCCCccCc
Confidence 77777777643
No 327
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.93 E-value=4.3e-10 Score=107.36 Aligned_cols=86 Identities=23% Similarity=0.210 Sum_probs=73.9
Q ss_pred CCCCCcEeeCcCCcCCCCCCccc--cCCCCCCEEeccCCcCCCCCcccccCC-----CCCCceecCCccccccCC-CCCC
Q 040392 8 GLKNLEYLFLGYNRLQGPIPDSF--GDLISLKFLNLSNNNLSGAIPASLEKL-----SYLENLNLSFNKLEGEIP-RGGP 79 (470)
Q Consensus 8 ~l~~l~~l~l~~n~l~~~~p~~~--~~l~~L~~l~l~~n~i~~~~~~~~~~l-----~~L~~l~l~~N~l~~~~~-~~~~ 79 (470)
++++|+.|+|++|++++.+|..+ ..+++|+.|+|++|+|++. |..+..+ ++|+.|++++|.|++.++ .+..
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 78899999999999998888876 8899999999999999966 7777777 899999999999987774 4578
Q ss_pred CCCCccccccCCccc
Q 040392 80 FRNFSVESFEGNELL 94 (470)
Q Consensus 80 l~~l~~l~~~~n~~~ 94 (470)
+++|+.|++++|.+.
T Consensus 172 l~~L~~L~Ls~N~l~ 186 (312)
T 1wwl_A 172 FPALSTLDLSDNPEL 186 (312)
T ss_dssp CSSCCEEECCSCTTC
T ss_pred CCCCCEEECCCCCcC
Confidence 899999999999853
No 328
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.93 E-value=1.5e-09 Score=113.27 Aligned_cols=90 Identities=21% Similarity=0.198 Sum_probs=53.2
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC-CCCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP-RGGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l 83 (470)
.|.++++|+.|+|++|.+++..|..|.++++|++|+|++|.|++..|..|..+++|+.|++++|.+++.++ .+..+++|
T Consensus 51 ~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 130 (606)
T 3vq2_A 51 SFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITL 130 (606)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTC
T ss_pred hccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCC
Confidence 55566666666666666665555556666666666666666665555666666666666666666654442 34555556
Q ss_pred ccccccCCccc
Q 040392 84 SVESFEGNELL 94 (470)
Q Consensus 84 ~~l~~~~n~~~ 94 (470)
+.|++++|.+.
T Consensus 131 ~~L~L~~n~l~ 141 (606)
T 3vq2_A 131 KKLNVAHNFIH 141 (606)
T ss_dssp CEEECCSSCCC
T ss_pred CEEeCCCCccc
Confidence 66666655553
No 329
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.93 E-value=1.5e-09 Score=112.05 Aligned_cols=85 Identities=27% Similarity=0.220 Sum_probs=75.7
Q ss_pred CCCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCC-cccccCCCCCCceecCCccccccCCCCC-
Q 040392 1 VIPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAI-PASLEKLSYLENLNLSFNKLEGEIPRGG- 78 (470)
Q Consensus 1 ~~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~-~~~~~~l~~L~~l~l~~N~l~~~~~~~~- 78 (470)
.+|..|++|++|+.|+|++|+|++ +| .++++++|+.|+|++|+|++.. |..+..+++|+.|+|++|.|++.++...
T Consensus 477 ~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 554 (567)
T 1dce_A 477 ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQER 554 (567)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTH
T ss_pred ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHH
Confidence 378999999999999999999996 66 8999999999999999999776 9999999999999999999998887653
Q ss_pred ---CCCCCcccc
Q 040392 79 ---PFRNFSVES 87 (470)
Q Consensus 79 ---~l~~l~~l~ 87 (470)
.+++|+.|+
T Consensus 555 l~~~lp~L~~L~ 566 (567)
T 1dce_A 555 LAEMLPSVSSIL 566 (567)
T ss_dssp HHHHCTTCSEEE
T ss_pred HHHHCcccCccC
Confidence 267777764
No 330
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.92 E-value=2e-09 Score=108.31 Aligned_cols=85 Identities=24% Similarity=0.172 Sum_probs=57.3
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCCccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNFSVESF 88 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~ 88 (470)
++|+.|+|++|+|++..|..|.++++|+.|+|++|.|++..|..|..+++|+.|+|++|.|++.++. +..+++|+.|++
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 4667777777777766666677777777777777777766666666777777777777777655554 355667777777
Q ss_pred cCCccc
Q 040392 89 EGNELL 94 (470)
Q Consensus 89 ~~n~~~ 94 (470)
++|.+.
T Consensus 155 ~~N~l~ 160 (452)
T 3zyi_A 155 RNNPIE 160 (452)
T ss_dssp CSCCCC
T ss_pred CCCCcc
Confidence 776654
No 331
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.92 E-value=1.9e-09 Score=113.28 Aligned_cols=81 Identities=23% Similarity=0.262 Sum_probs=37.5
Q ss_pred CCcEeeCcCCcCCCCCCcccc--CCCCCCEEeccCCcCCCCCcccccCCCCCCceec------CCccccccCC-CCCCCC
Q 040392 11 NLEYLFLGYNRLQGPIPDSFG--DLISLKFLNLSNNNLSGAIPASLEKLSYLENLNL------SFNKLEGEIP-RGGPFR 81 (470)
Q Consensus 11 ~l~~l~l~~n~l~~~~p~~~~--~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l------~~N~l~~~~~-~~~~l~ 81 (470)
+|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|++ ++|.+.+.+| .+..++
T Consensus 489 ~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~ 566 (636)
T 4eco_A 489 LLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCP 566 (636)
T ss_dssp GCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCS
T ss_pred CccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCC
Confidence 4555555555554 3444443 44555555555555553 4444444555555544 2233333333 223444
Q ss_pred CCccccccCCcc
Q 040392 82 NFSVESFEGNEL 93 (470)
Q Consensus 82 ~l~~l~~~~n~~ 93 (470)
+|+.|++++|.+
T Consensus 567 ~L~~L~Ls~N~l 578 (636)
T 4eco_A 567 SLTQLQIGSNDI 578 (636)
T ss_dssp SCCEEECCSSCC
T ss_pred CCCEEECCCCcC
Confidence 444555554444
No 332
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.92 E-value=8.8e-10 Score=117.24 Aligned_cols=90 Identities=23% Similarity=0.160 Sum_probs=80.1
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRN 82 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~ 82 (470)
|+.|..+++|+.|+|++|.+. .+|..+.++++|+.|+|++|.|+ .+|..|..|++|+.|+|++|.|+..+..+..|++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~ 294 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQ 294 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCC
Confidence 667889999999999999999 78888889999999999999999 8999999999999999999999977667789999
Q ss_pred CccccccCCccc
Q 040392 83 FSVESFEGNELL 94 (470)
Q Consensus 83 l~~l~~~~n~~~ 94 (470)
|+.|++++|.+.
T Consensus 295 L~~L~L~~N~l~ 306 (727)
T 4b8c_D 295 LKYFYFFDNMVT 306 (727)
T ss_dssp CSEEECCSSCCC
T ss_pred CCEEECCCCCCC
Confidence 999999999885
No 333
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.92 E-value=2.1e-09 Score=103.30 Aligned_cols=85 Identities=26% Similarity=0.198 Sum_probs=55.8
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFE 89 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~ 89 (470)
++|+.|+|++|.+++..|..+.++++|+.|+|++|.+++..+..+..+++|+.|++++|.|+..+..+..+++|+.|+++
T Consensus 192 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~ 271 (330)
T 1xku_A 192 PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLH 271 (330)
T ss_dssp TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECC
T ss_pred ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECC
Confidence 45555555555665555566666777777777777777555556667777777777777776555556666777777777
Q ss_pred CCccc
Q 040392 90 GNELL 94 (470)
Q Consensus 90 ~n~~~ 94 (470)
+|++.
T Consensus 272 ~N~i~ 276 (330)
T 1xku_A 272 NNNIS 276 (330)
T ss_dssp SSCCC
T ss_pred CCcCC
Confidence 77764
No 334
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.91 E-value=1.5e-09 Score=113.31 Aligned_cols=93 Identities=18% Similarity=0.090 Sum_probs=71.7
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCcccccc-CCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGE-IPRGGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~-~~~~~~l~ 81 (470)
|..|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|..+++|+.|++++|.|++. +..+..++
T Consensus 50 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~ 129 (606)
T 3t6q_A 50 NTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQK 129 (606)
T ss_dssp TTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCT
T ss_pred hhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCC
Confidence 56777888888888888888877777788888888888888888877777788888888888888888764 23456777
Q ss_pred CCccccccCCcccc
Q 040392 82 NFSVESFEGNELLC 95 (470)
Q Consensus 82 ~l~~l~~~~n~~~~ 95 (470)
+|+.|++++|.+..
T Consensus 130 ~L~~L~L~~n~l~~ 143 (606)
T 3t6q_A 130 TLESLYLGSNHISS 143 (606)
T ss_dssp TCCEEECCSSCCCC
T ss_pred cccEEECCCCcccc
Confidence 78888888877754
No 335
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.91 E-value=1.7e-09 Score=109.47 Aligned_cols=90 Identities=27% Similarity=0.275 Sum_probs=49.5
Q ss_pred cccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCC
Q 040392 4 TEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRN 82 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~ 82 (470)
..|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|.+++.++. +..+++
T Consensus 50 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 129 (477)
T 2id5_A 50 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYN 129 (477)
T ss_dssp TTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHcccccc
Confidence 4455555555555555555555555555555555555555555533334455555555555555555544332 344555
Q ss_pred CccccccCCcc
Q 040392 83 FSVESFEGNEL 93 (470)
Q Consensus 83 l~~l~~~~n~~ 93 (470)
|+.|++++|.+
T Consensus 130 L~~L~l~~n~l 140 (477)
T 2id5_A 130 LKSLEVGDNDL 140 (477)
T ss_dssp CCEEEECCTTC
T ss_pred CCEEECCCCcc
Confidence 55555555554
No 336
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.90 E-value=1.4e-09 Score=111.28 Aligned_cols=90 Identities=21% Similarity=0.183 Sum_probs=72.8
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|+|++..|..|..+++|+.|++++|.|+..++. .++
T Consensus 15 ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~ 90 (520)
T 2z7x_B 15 VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH--PTV 90 (520)
T ss_dssp CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC--CCC
T ss_pred cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc--ccC
Confidence 566665 7888888888888877777888888888888888888877788888888888888888888854443 788
Q ss_pred CCccccccCCcccc
Q 040392 82 NFSVESFEGNELLC 95 (470)
Q Consensus 82 ~l~~l~~~~n~~~~ 95 (470)
+|+.|++++|.+..
T Consensus 91 ~L~~L~L~~N~l~~ 104 (520)
T 2z7x_B 91 NLKHLDLSFNAFDA 104 (520)
T ss_dssp CCSEEECCSSCCSS
T ss_pred CccEEeccCCcccc
Confidence 88888888888754
No 337
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.90 E-value=2.8e-09 Score=106.82 Aligned_cols=84 Identities=24% Similarity=0.175 Sum_probs=41.2
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCCccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNFSVESF 88 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~ 88 (470)
++++.|+|++|++++..+..|.++++|+.|+|++|.|++..+..|..+++|+.|+|++|.|++.++. +..+++|+.|++
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 3445555555555544444455555555555555555544444455555555555555555443332 244455555555
Q ss_pred cCCcc
Q 040392 89 EGNEL 93 (470)
Q Consensus 89 ~~n~~ 93 (470)
++|.+
T Consensus 144 ~~N~i 148 (440)
T 3zyj_A 144 RNNPI 148 (440)
T ss_dssp CSCCC
T ss_pred CCCcc
Confidence 55544
No 338
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.90 E-value=6.4e-10 Score=106.13 Aligned_cols=91 Identities=20% Similarity=0.175 Sum_probs=71.1
Q ss_pred CCccc--CCCCCCcEeeCcCCcCCCCCCccccCC-----CCCCEEeccCCcCCCCCcccccCCCCCCceecCCcccccc-
Q 040392 2 IPTEI--GGLKNLEYLFLGYNRLQGPIPDSFGDL-----ISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGE- 73 (470)
Q Consensus 2 ~p~~~--~~l~~l~~l~l~~n~l~~~~p~~~~~l-----~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~- 73 (470)
+|..+ .++++|+.|+|++|++++. |..+..+ ++|++|+|++|+|++..|..+..+++|+.|++++|++.+.
T Consensus 111 ~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 189 (312)
T 1wwl_A 111 APPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER 189 (312)
T ss_dssp CCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH
T ss_pred hHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch
Confidence 46655 7888888888888888866 7777766 8888888888888877778888888888888888887654
Q ss_pred --CCCC--CCCCCCccccccCCcc
Q 040392 74 --IPRG--GPFRNFSVESFEGNEL 93 (470)
Q Consensus 74 --~~~~--~~l~~l~~l~~~~n~~ 93 (470)
++.. ..+++|+.|++++|.+
T Consensus 190 ~~~~~~~~~~l~~L~~L~L~~N~l 213 (312)
T 1wwl_A 190 GLISALCPLKFPTLQVLALRNAGM 213 (312)
T ss_dssp HHHHHSCTTSCTTCCEEECTTSCC
T ss_pred HHHHHHHhccCCCCCEEECCCCcC
Confidence 3333 6778888888888876
No 339
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.90 E-value=1.9e-09 Score=103.67 Aligned_cols=87 Identities=23% Similarity=0.165 Sum_probs=71.7
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFE 89 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~ 89 (470)
++|+.|+|++|.+++..|..+.++++|+.|+|++|.|++..+..+..+++|+.|++++|.|+..+..+..+++|+.|+++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~ 272 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLH 272 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECC
Confidence 57888888888888777778888888888888888888777778888888888999988888666667788888888888
Q ss_pred CCccccC
Q 040392 90 GNELLCG 96 (470)
Q Consensus 90 ~n~~~~~ 96 (470)
+|++..-
T Consensus 273 ~N~l~~~ 279 (332)
T 2ft3_A 273 TNNITKV 279 (332)
T ss_dssp SSCCCBC
T ss_pred CCCCCcc
Confidence 8887543
No 340
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.90 E-value=1.7e-09 Score=106.59 Aligned_cols=92 Identities=21% Similarity=0.238 Sum_probs=71.7
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~ 81 (470)
|..|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|.+++..+..|..+++|+.|++++|.+++.++. +..++
T Consensus 86 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 165 (390)
T 3o6n_A 86 TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATT 165 (390)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCT
T ss_pred hhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCC
Confidence 34677888888888888888877777788888888888888888843334467888888888888888876654 56778
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|.+.
T Consensus 166 ~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 166 SLQNLQLSSNRLT 178 (390)
T ss_dssp TCCEEECCSSCCS
T ss_pred CCCEEECCCCcCC
Confidence 8888888888764
No 341
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.89 E-value=1.6e-09 Score=112.98 Aligned_cols=93 Identities=20% Similarity=0.231 Sum_probs=82.1
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~ 81 (470)
|..|+++++|+.|+|++|.+++..|..|+++++|+.|+|++|.|++..+..|..+++|+.|++++|.|++.++. +..++
T Consensus 92 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 171 (597)
T 3oja_B 92 TYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATT 171 (597)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCT
T ss_pred hHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCC
Confidence 45889999999999999999988888889999999999999999955556678999999999999999987775 57899
Q ss_pred CCccccccCCcccc
Q 040392 82 NFSVESFEGNELLC 95 (470)
Q Consensus 82 ~l~~l~~~~n~~~~ 95 (470)
+|+.|++++|.+..
T Consensus 172 ~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 172 SLQNLQLSSNRLTH 185 (597)
T ss_dssp TCCEEECTTSCCSB
T ss_pred cCcEEECcCCCCCC
Confidence 99999999998753
No 342
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.88 E-value=2.6e-09 Score=102.72 Aligned_cols=92 Identities=24% Similarity=0.291 Sum_probs=81.7
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCC----
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGG---- 78 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~---- 78 (470)
|..|.++++|+.|+|++|.+++..+..+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|.|++.++...
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~ 287 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 287 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcc
Confidence 567899999999999999999887778999999999999999999 889999999999999999999997666532
Q ss_pred ---CCCCCccccccCCcccc
Q 040392 79 ---PFRNFSVESFEGNELLC 95 (470)
Q Consensus 79 ---~l~~l~~l~~~~n~~~~ 95 (470)
....++.+++.+|++.+
T Consensus 288 ~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 288 YNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CCTTSCCCSEEECCSSSSCG
T ss_pred cccccccccceEeecCcccc
Confidence 24678899999999865
No 343
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.88 E-value=3.5e-10 Score=121.83 Aligned_cols=93 Identities=18% Similarity=0.217 Sum_probs=70.3
Q ss_pred CCcccCCCCCCcEeeCcCCcCCC-----------------CCCcccc--CCCCCCEEeccCCcCCCCCcccccCCCCCCc
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQG-----------------PIPDSFG--DLISLKFLNLSNNNLSGAIPASLEKLSYLEN 62 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~-----------------~~p~~~~--~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~ 62 (470)
+|.+|++|++|+.|+|++|+|++ .+|+.++ ++++|+.|+|++|.+.+.+|..+..+++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 57778888888888888888887 2777776 8888888888888888888888888888888
Q ss_pred eecCCcc-ccc-cCCC-C-------CCCCCCccccccCCccc
Q 040392 63 LNLSFNK-LEG-EIPR-G-------GPFRNFSVESFEGNELL 94 (470)
Q Consensus 63 l~l~~N~-l~~-~~~~-~-------~~l~~l~~l~~~~n~~~ 94 (470)
|++++|. |++ .+|. + ..+++|+.|++++|.+.
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 8888887 776 3332 2 23447777777777765
No 344
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.88 E-value=2.5e-09 Score=110.70 Aligned_cols=90 Identities=20% Similarity=0.175 Sum_probs=71.7
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
+|.++. ++|+.|+|++|.+++..|..|.++++|++|+|++|+|++..|+.|..+++|+.|++++|.|+..++. .++
T Consensus 46 ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~--~l~ 121 (562)
T 3a79_B 46 VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC--PMA 121 (562)
T ss_dssp CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC--CCT
T ss_pred CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc--ccc
Confidence 455554 7888888888888877777888888888888888888877788888888888888888888854444 788
Q ss_pred CCccccccCCcccc
Q 040392 82 NFSVESFEGNELLC 95 (470)
Q Consensus 82 ~l~~l~~~~n~~~~ 95 (470)
+|+.|++++|.+..
T Consensus 122 ~L~~L~Ls~N~l~~ 135 (562)
T 3a79_B 122 SLRHLDLSFNDFDV 135 (562)
T ss_dssp TCSEEECCSSCCSB
T ss_pred cCCEEECCCCCccc
Confidence 88888888888743
No 345
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.88 E-value=1.4e-09 Score=105.68 Aligned_cols=91 Identities=24% Similarity=0.318 Sum_probs=80.9
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l 80 (470)
+|.++. ++|+.|+|++|++++..+..|.++++|+.|+|++|.|++..|..|..+++|+.|++++|.|++.++. +..+
T Consensus 46 iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 123 (353)
T 2z80_A 46 IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPL 123 (353)
T ss_dssp CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTC
T ss_pred cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCC
Confidence 565554 5899999999999977666899999999999999999987788899999999999999999977665 5789
Q ss_pred CCCccccccCCccc
Q 040392 81 RNFSVESFEGNELL 94 (470)
Q Consensus 81 ~~l~~l~~~~n~~~ 94 (470)
++|+.|++++|++.
T Consensus 124 ~~L~~L~L~~n~l~ 137 (353)
T 2z80_A 124 SSLTFLNLLGNPYK 137 (353)
T ss_dssp TTCSEEECTTCCCS
T ss_pred ccCCEEECCCCCCc
Confidence 99999999999985
No 346
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.88 E-value=1.4e-09 Score=99.50 Aligned_cols=86 Identities=21% Similarity=0.264 Sum_probs=53.3
Q ss_pred ccCCCCCCcEeeCcCCc-CCCCCCccccCCCCCCEEeccC-CcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNR-LQGPIPDSFGDLISLKFLNLSN-NNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRN 82 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~-l~~~~p~~~~~l~~L~~l~l~~-n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~ 82 (470)
.|.++++|+.|+|++|. ++...+..|.++++|++|+|++ |+|++..+..|..+++|+.|++++|.+++. |.+..+.+
T Consensus 50 ~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~l-p~~~~l~~ 128 (239)
T 2xwt_C 50 AFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMF-PDLTKVYS 128 (239)
T ss_dssp TTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCSC-CCCTTCCB
T ss_pred HccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCccc-cccccccc
Confidence 45666666666666665 6644444566666666666666 666644445566666666666666666653 33555555
Q ss_pred Cc---cccccCC
Q 040392 83 FS---VESFEGN 91 (470)
Q Consensus 83 l~---~l~~~~n 91 (470)
|+ .+++++|
T Consensus 129 L~~L~~L~l~~N 140 (239)
T 2xwt_C 129 TDIFFILEITDN 140 (239)
T ss_dssp CCSEEEEEEESC
T ss_pred cccccEEECCCC
Confidence 55 6666666
No 347
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.88 E-value=1.4e-09 Score=110.42 Aligned_cols=91 Identities=25% Similarity=0.215 Sum_probs=80.2
Q ss_pred CcccC-CCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 3 PTEIG-GLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 3 p~~~~-~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
|..+. ++++|+.|+|++|.|++. +.+..+++|+.|+|++|.|++ +|..+..+++|+.|++++|.|++.++.+..++
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~--~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~ 237 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDV--KGQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQ 237 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE--ECCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCT
T ss_pred hHHHhhhCCcccEEecCCCccccc--cccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcccchhhccCC
Confidence 55665 799999999999999966 335569999999999999995 55569999999999999999998888888899
Q ss_pred CCccccccCCccccC
Q 040392 82 NFSVESFEGNELLCG 96 (470)
Q Consensus 82 ~l~~l~~~~n~~~~~ 96 (470)
+|+.+++++|++.|+
T Consensus 238 ~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 238 NLEHFDLRGNGFHCG 252 (487)
T ss_dssp TCCEEECTTCCBCHH
T ss_pred CCCEEEcCCCCCcCc
Confidence 999999999999874
No 348
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.88 E-value=1.3e-09 Score=112.40 Aligned_cols=92 Identities=22% Similarity=0.271 Sum_probs=84.1
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l 80 (470)
+|.++. ++|+.|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|+.|++++|.+++.++. +..+
T Consensus 20 ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 97 (549)
T 2z81_A 20 IPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL 97 (549)
T ss_dssp CCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTC
T ss_pred ccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccC
Confidence 566654 7999999999999988889999999999999999999988888999999999999999999988876 6889
Q ss_pred CCCccccccCCcccc
Q 040392 81 RNFSVESFEGNELLC 95 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~ 95 (470)
++|+.|++++|.+..
T Consensus 98 ~~L~~L~Ls~n~l~~ 112 (549)
T 2z81_A 98 SSLKYLNLMGNPYQT 112 (549)
T ss_dssp TTCCEEECTTCCCSS
T ss_pred CCCcEEECCCCcccc
Confidence 999999999999854
No 349
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.88 E-value=2e-09 Score=102.51 Aligned_cols=86 Identities=23% Similarity=0.205 Sum_probs=62.7
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCc----cccCCCCCCEEeccCCcCCCCCcccccCC---CCCCceecCCccccccCCCCC
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPD----SFGDLISLKFLNLSNNNLSGAIPASLEKL---SYLENLNLSFNKLEGEIPRGG 78 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~----~~~~l~~L~~l~l~~n~i~~~~~~~~~~l---~~L~~l~l~~N~l~~~~~~~~ 78 (470)
++++++|+.|+|++|+++ .+|. .+.++++|++|+|++|+|++..|..+..+ ++|+.|++++|.|+..+..+.
T Consensus 193 ~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~ 271 (310)
T 4glp_A 193 PHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP 271 (310)
T ss_dssp TTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC
T ss_pred hhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc
Confidence 367788888888888887 3343 24667888888888888887667666666 588888888888885444432
Q ss_pred CCCCCccccccCCccc
Q 040392 79 PFRNFSVESFEGNELL 94 (470)
Q Consensus 79 ~l~~l~~l~~~~n~~~ 94 (470)
++|+.|++++|++.
T Consensus 272 --~~L~~L~Ls~N~l~ 285 (310)
T 4glp_A 272 --AKLRVLDLSSNRLN 285 (310)
T ss_dssp --SCCSCEECCSCCCC
T ss_pred --CCCCEEECCCCcCC
Confidence 67888888888775
No 350
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.88 E-value=3.1e-09 Score=109.95 Aligned_cols=90 Identities=22% Similarity=0.202 Sum_probs=67.1
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCc-cccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPD-SFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~-~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
|..|.++++|+.|+|++|++++.+|. .+..+++|+.|+|++|+|++..|..+. ++|+.|++++|+|+..++.+..++
T Consensus 396 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~ 473 (562)
T 3a79_B 396 ALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQ 473 (562)
T ss_dssp HHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSC
T ss_pred hhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCC
Confidence 35678889999999999999874555 477788888888888888766655443 577777777777776666666777
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|.+.
T Consensus 474 ~L~~L~L~~N~l~ 486 (562)
T 3a79_B 474 ALQELNVASNQLK 486 (562)
T ss_dssp CCSEEECCSSCCC
T ss_pred CCCEEECCCCCCC
Confidence 7777777777765
No 351
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.87 E-value=3e-09 Score=108.87 Aligned_cols=90 Identities=21% Similarity=0.143 Sum_probs=56.7
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCcc-ccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDS-FGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~-~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
|..+.++++|+.|+|++|.+++.+|.. +..+++|+.|+|++|++++..|..+. ++|+.|++++|.|+..++.+..++
T Consensus 367 ~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~ 444 (520)
T 2z7x_B 367 AEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLE 444 (520)
T ss_dssp HHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCT
T ss_pred hHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCC
Confidence 345677788888888888887645543 66666677777766666655554442 566666666666664444445566
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|++.
T Consensus 445 ~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 445 ALQELNVASNQLK 457 (520)
T ss_dssp TCCEEECCSSCCC
T ss_pred CCCEEECCCCcCC
Confidence 6666666666554
No 352
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.87 E-value=5.8e-10 Score=120.11 Aligned_cols=96 Identities=21% Similarity=0.208 Sum_probs=83.1
Q ss_pred CCcccC--CCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCc-CCC-CCcccccCCC-------CCCceecCCccc
Q 040392 2 IPTEIG--GLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNN-LSG-AIPASLEKLS-------YLENLNLSFNKL 70 (470)
Q Consensus 2 ~p~~~~--~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~-i~~-~~~~~~~~l~-------~L~~l~l~~N~l 70 (470)
+|.+++ +|++|+.|+|++|++.+.+|..|.++++|+.|+|++|+ ++| .+|..+..++ +|+.|++++|.|
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 788888 99999999999999999999999999999999999998 998 7887666655 999999999999
Q ss_pred cccCC--CCCCCCCCccccccCCccccCCC
Q 040392 71 EGEIP--RGGPFRNFSVESFEGNELLCGSP 98 (470)
Q Consensus 71 ~~~~~--~~~~l~~l~~l~~~~n~~~~~~~ 98 (470)
+..+. .+..+++|+.|++++|.+. ..|
T Consensus 561 ~~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp 589 (876)
T 4ecn_A 561 EEFPASASLQKMVKLGLLDCVHNKVR-HLE 589 (876)
T ss_dssp CBCCCHHHHTTCTTCCEEECTTSCCC-BCC
T ss_pred CccCChhhhhcCCCCCEEECCCCCcc-cch
Confidence 94444 3688999999999999886 444
No 353
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.86 E-value=3.3e-09 Score=110.69 Aligned_cols=94 Identities=22% Similarity=0.251 Sum_probs=84.3
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccc-cCCCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEG-EIPRGGPF 80 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~-~~~~~~~l 80 (470)
.|+.|.++++|+.|+|++|++++..|..|.++++|++|+|++|.|++..|..+..+++|+.|++++|.+++ .++....+
T Consensus 73 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 152 (606)
T 3t6q_A 73 HEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPT 152 (606)
T ss_dssp CTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCC
T ss_pred ChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCC
Confidence 47789999999999999999998889999999999999999999997667889999999999999999987 44666669
Q ss_pred CCCccccccCCcccc
Q 040392 81 RNFSVESFEGNELLC 95 (470)
Q Consensus 81 ~~l~~l~~~~n~~~~ 95 (470)
++|+.|++++|.+..
T Consensus 153 ~~L~~L~L~~n~l~~ 167 (606)
T 3t6q_A 153 EKLKVLDFQNNAIHY 167 (606)
T ss_dssp TTCCEEECCSSCCCE
T ss_pred cccCEEEcccCcccc
Confidence 999999999998743
No 354
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.86 E-value=4.5e-09 Score=101.09 Aligned_cols=92 Identities=25% Similarity=0.191 Sum_probs=81.2
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCC----
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGG---- 78 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~---- 78 (470)
|..|.++++|+.|+|++|++++..|..+..+++|+.|+|++|+|+ .+|..+..+++|+.|++++|.|++..+...
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 288 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG 288 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccc
Confidence 467889999999999999999888888999999999999999999 899899999999999999999997665431
Q ss_pred ---CCCCCccccccCCcccc
Q 040392 79 ---PFRNFSVESFEGNELLC 95 (470)
Q Consensus 79 ---~l~~l~~l~~~~n~~~~ 95 (470)
...+|+.+++.+|++.+
T Consensus 289 ~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 289 FGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp CCSSSCCBSEEECCSSSSCG
T ss_pred cccccccccceEeecCcccc
Confidence 14678899999999863
No 355
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.85 E-value=2.7e-09 Score=115.87 Aligned_cols=91 Identities=27% Similarity=0.318 Sum_probs=48.5
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCccc--ccCCCCCCceecCCccccccCC--CCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPAS--LEKLSYLENLNLSFNKLEGEIP--RGG 78 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~--~~~l~~L~~l~l~~N~l~~~~~--~~~ 78 (470)
|..|.+|++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|.. +..+++|+.|++++|.+++..+ .+.
T Consensus 66 ~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~ 145 (844)
T 3j0a_A 66 KEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFG 145 (844)
T ss_dssp TTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGG
T ss_pred HHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHh
Confidence 344555555555555555555555555555555555555555555444433 5555555555555555554332 234
Q ss_pred CCCCCccccccCCcc
Q 040392 79 PFRNFSVESFEGNEL 93 (470)
Q Consensus 79 ~l~~l~~l~~~~n~~ 93 (470)
.+++|+.|++++|.+
T Consensus 146 ~L~~L~~L~Ls~N~i 160 (844)
T 3j0a_A 146 KLNSLKSIDFSSNQI 160 (844)
T ss_dssp TCSSCCEEEEESSCC
T ss_pred hCCCCCEEECCCCcC
Confidence 555555555555544
No 356
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.84 E-value=2.7e-09 Score=102.02 Aligned_cols=90 Identities=23% Similarity=0.202 Sum_probs=66.9
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccc-cCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSF-GDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~-~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
|..++++++|+.|+|++|.+++..|..+ ..+++|+.|+|++|.|++ +|. ...+++|+.|++++|.|++.++.+..++
T Consensus 137 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~ 214 (317)
T 3o53_A 137 DLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAA 214 (317)
T ss_dssp GBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCCEECGGGGGGT
T ss_pred chhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCCcchhhhcccC
Confidence 4466778888888888888886666666 367888888888888874 333 3347788888888888877767667777
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|.+.
T Consensus 215 ~L~~L~L~~N~l~ 227 (317)
T 3o53_A 215 GVTWISLRNNKLV 227 (317)
T ss_dssp TCSEEECTTSCCC
T ss_pred cccEEECcCCccc
Confidence 8888888888775
No 357
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.83 E-value=4.2e-09 Score=108.96 Aligned_cols=91 Identities=18% Similarity=0.120 Sum_probs=59.9
Q ss_pred cccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC-CCCCCCC
Q 040392 4 TEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP-RGGPFRN 82 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~ 82 (470)
..|.++++|+.|+|++|++++..|..|.++++|++|+|++|.+++..|..|..+++|+.|++++|.+++.++ .+..+++
T Consensus 46 ~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~ 125 (570)
T 2z63_A 46 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 125 (570)
T ss_dssp TTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTT
T ss_pred hHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCcccccccc
Confidence 356666777777777777765555666667777777777777765555666667777777777776665444 2456666
Q ss_pred CccccccCCccc
Q 040392 83 FSVESFEGNELL 94 (470)
Q Consensus 83 l~~l~~~~n~~~ 94 (470)
|+.|++++|.+.
T Consensus 126 L~~L~L~~n~l~ 137 (570)
T 2z63_A 126 LKELNVAHNLIQ 137 (570)
T ss_dssp CCEEECCSSCCC
T ss_pred ccEEecCCCccc
Confidence 777777666653
No 358
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.82 E-value=6.4e-09 Score=96.55 Aligned_cols=82 Identities=24% Similarity=0.270 Sum_probs=46.5
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV 85 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~ 85 (470)
+..+++|+.|++++|.++ .+| .+..+++|+.|+|++|+|++ ++. +..+++|+.|++++|.|++.++ ... .+|+.
T Consensus 37 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l~~-~~~-~~L~~ 110 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNLNG-IPS-ACLSR 110 (263)
T ss_dssp HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCCTT-CCC-SSCCE
T ss_pred hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCcCc-ccc-CcccE
Confidence 345566666666666666 333 45566666666666666663 333 6666666666666666664322 222 55666
Q ss_pred ccccCCcc
Q 040392 86 ESFEGNEL 93 (470)
Q Consensus 86 l~~~~n~~ 93 (470)
|++++|.+
T Consensus 111 L~L~~N~l 118 (263)
T 1xeu_A 111 LFLDNNEL 118 (263)
T ss_dssp EECCSSCC
T ss_pred EEccCCcc
Confidence 66666655
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.81 E-value=7.4e-09 Score=97.65 Aligned_cols=84 Identities=35% Similarity=0.457 Sum_probs=60.2
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV 85 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~ 85 (470)
+.++++|+.|+|++|.+++. +.+..+++|+.|+|++|+|++ + +.+..+++|+.|++++|.|++. +.+..+++|+.
T Consensus 86 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~ 160 (291)
T 1h6t_A 86 LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDT 160 (291)
T ss_dssp GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSE
T ss_pred cccCCCCCEEECCCCcCCCC--hhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCE
Confidence 66777788888888887742 347777778888888887774 3 3467777777777777777754 55666777777
Q ss_pred ccccCCccc
Q 040392 86 ESFEGNELL 94 (470)
Q Consensus 86 l~~~~n~~~ 94 (470)
|++++|.+.
T Consensus 161 L~L~~N~l~ 169 (291)
T 1h6t_A 161 LSLEDNQIS 169 (291)
T ss_dssp EECCSSCCC
T ss_pred EEccCCccc
Confidence 777777764
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.80 E-value=5.1e-09 Score=98.80 Aligned_cols=85 Identities=24% Similarity=0.315 Sum_probs=62.5
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCc
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFS 84 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~ 84 (470)
.+.++++|+.|+|++|++++. +.+..+++|+.|+|++|++++. ..+..+++|+.|++++|.|++.++ +..+++|+
T Consensus 107 ~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~ 181 (291)
T 1h6t_A 107 SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQ 181 (291)
T ss_dssp GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCC
T ss_pred hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccC
Confidence 467778888888888888753 4677777888888888887743 457777778888888887776555 66777777
Q ss_pred cccccCCccc
Q 040392 85 VESFEGNELL 94 (470)
Q Consensus 85 ~l~~~~n~~~ 94 (470)
.|++++|.+.
T Consensus 182 ~L~L~~N~i~ 191 (291)
T 1h6t_A 182 NLYLSKNHIS 191 (291)
T ss_dssp EEECCSSCCC
T ss_pred EEECCCCcCC
Confidence 7777777763
No 361
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.80 E-value=7.5e-09 Score=109.57 Aligned_cols=90 Identities=23% Similarity=0.217 Sum_probs=58.7
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l 83 (470)
.|.++++|+.|+|++|.+++..|..|.++++|+.|+|++|.+++..+..|..+++|+.|++++|.+++.++. +..+++|
T Consensus 44 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 123 (680)
T 1ziw_A 44 NFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNL 123 (680)
T ss_dssp GGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTC
T ss_pred HHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCC
Confidence 466667777777777777766666666677777777777777643334566677777777777766655543 4566666
Q ss_pred ccccccCCccc
Q 040392 84 SVESFEGNELL 94 (470)
Q Consensus 84 ~~l~~~~n~~~ 94 (470)
+.|++++|.+.
T Consensus 124 ~~L~Ls~n~l~ 134 (680)
T 1ziw_A 124 ITLDLSHNGLS 134 (680)
T ss_dssp CEEECCSSCCS
T ss_pred CEEECCCCccc
Confidence 66666666654
No 362
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.79 E-value=5.4e-09 Score=99.57 Aligned_cols=85 Identities=15% Similarity=0.061 Sum_probs=61.6
Q ss_pred CCCCcEeeCcCCcCCCCCCccc--cCCCCCCEEeccCCcCCCCCc----ccccCCCCCCceecCCccccccCCC-CCCCC
Q 040392 9 LKNLEYLFLGYNRLQGPIPDSF--GDLISLKFLNLSNNNLSGAIP----ASLEKLSYLENLNLSFNKLEGEIPR-GGPFR 81 (470)
Q Consensus 9 l~~l~~l~l~~n~l~~~~p~~~--~~l~~L~~l~l~~n~i~~~~~----~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~ 81 (470)
+++|+.|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|+.|++++|.|++.++. +..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4567888888888877777776 777788888888888776544 3344677888888888887766653 45677
Q ss_pred CCccccccCCcc
Q 040392 82 NFSVESFEGNEL 93 (470)
Q Consensus 82 ~l~~l~~~~n~~ 93 (470)
+|+.|++++|++
T Consensus 170 ~L~~L~Ls~N~l 181 (310)
T 4glp_A 170 ALTSLDLSDNPG 181 (310)
T ss_dssp TCCEEECCSCTT
T ss_pred CCCEEECCCCCC
Confidence 788888888775
No 363
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.79 E-value=3.1e-09 Score=97.13 Aligned_cols=89 Identities=20% Similarity=0.167 Sum_probs=77.9
Q ss_pred cccCCCCCCcEeeCcC-CcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCC---ceecCCc-cccccCCC-C
Q 040392 4 TEIGGLKNLEYLFLGY-NRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLE---NLNLSFN-KLEGEIPR-G 77 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~-n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~---~l~l~~N-~l~~~~~~-~ 77 (470)
..|.++++|+.|+|++ |++++..+..|.++++|+.|+|++|++++ +|. +..+++|+ .|++++| .+++.++. +
T Consensus 74 ~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~ 151 (239)
T 2xwt_C 74 HSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAF 151 (239)
T ss_dssp TTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTT
T ss_pred hHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccc
Confidence 4678999999999998 99997766789999999999999999995 776 88899998 9999999 89877765 5
Q ss_pred CCCCCCc-cccccCCccc
Q 040392 78 GPFRNFS-VESFEGNELL 94 (470)
Q Consensus 78 ~~l~~l~-~l~~~~n~~~ 94 (470)
..+++|+ .+++++|.+.
T Consensus 152 ~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 152 QGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp TTTBSSEEEEECCSCCCC
T ss_pred cchhcceeEEEcCCCCCc
Confidence 7789999 9999999885
No 364
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.79 E-value=5.3e-09 Score=101.14 Aligned_cols=86 Identities=30% Similarity=0.415 Sum_probs=57.6
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCCc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNFS 84 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~ 84 (470)
+..+++|+.|+|++|.+++. +.+..+++|+.|++++|.+++ + +.+..+++|+.|++++|.+++..+. +..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 56677777777777777743 456677777777777777774 3 3466777777777777777655443 35567777
Q ss_pred cccccCCcccc
Q 040392 85 VESFEGNELLC 95 (470)
Q Consensus 85 ~l~~~~n~~~~ 95 (470)
.|++++|++..
T Consensus 315 ~L~L~~n~l~~ 325 (347)
T 4fmz_A 315 TLFLSQNHITD 325 (347)
T ss_dssp EEECCSSSCCC
T ss_pred EEEccCCcccc
Confidence 77777777644
No 365
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.79 E-value=7.8e-09 Score=109.43 Aligned_cols=92 Identities=23% Similarity=0.179 Sum_probs=75.6
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFR 81 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~ 81 (470)
|..|+++++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|+.|++++|.+++.++. +..++
T Consensus 66 ~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 145 (680)
T 1ziw_A 66 PELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLE 145 (680)
T ss_dssp TTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCT
T ss_pred HHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccc
Confidence 56678888999999999998855555788899999999999999876667888899999999999988876655 46788
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|.+.
T Consensus 146 ~L~~L~L~~n~l~ 158 (680)
T 1ziw_A 146 NLQELLLSNNKIQ 158 (680)
T ss_dssp TCCEEECCSSCCC
T ss_pred cCCEEEccCCccc
Confidence 8888888888764
No 366
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.76 E-value=5.7e-11 Score=105.51 Aligned_cols=89 Identities=22% Similarity=0.283 Sum_probs=72.9
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
+|..|.++++|+.|+|++|.+++ +| .+.++++|+.|+|++|.|+ .+|..+..+++|+.|++++|.|++. +.+..++
T Consensus 40 l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l-~~~~~l~ 115 (198)
T 1ds9_A 40 MDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL-SGIEKLV 115 (198)
T ss_dssp CHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCH-HHHHHHH
T ss_pred hhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcC-CccccCC
Confidence 34478888999999999999985 66 8888999999999999998 7787777788899999999988864 4566677
Q ss_pred CCccccccCCccc
Q 040392 82 NFSVESFEGNELL 94 (470)
Q Consensus 82 ~l~~l~~~~n~~~ 94 (470)
+|+.|++++|++.
T Consensus 116 ~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 116 NLRVLYMSNNKIT 128 (198)
T ss_dssp HSSEEEESEEECC
T ss_pred CCCEEECCCCcCC
Confidence 8888888888763
No 367
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.76 E-value=1.4e-08 Score=96.54 Aligned_cols=84 Identities=21% Similarity=0.265 Sum_probs=55.5
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCc
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFS 84 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~ 84 (470)
.+..+++|+.|+|++|.+++. ++ +..+++|+.|+|++|.+++ ++ .+..+++|+.|++++|.|++.. .+..+++|+
T Consensus 58 ~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~ 132 (308)
T 1h6u_A 58 GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDVT-PLAGLSNLQ 132 (308)
T ss_dssp TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCCG-GGTTCTTCC
T ss_pred hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCch-hhcCCCCCC
Confidence 456667777777777777743 33 6677777777777777763 33 4666777777777777776433 356667777
Q ss_pred cccccCCcc
Q 040392 85 VESFEGNEL 93 (470)
Q Consensus 85 ~l~~~~n~~ 93 (470)
.|++++|.+
T Consensus 133 ~L~l~~n~l 141 (308)
T 1h6u_A 133 VLYLDLNQI 141 (308)
T ss_dssp EEECCSSCC
T ss_pred EEECCCCcc
Confidence 777777765
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.75 E-value=1.4e-08 Score=94.21 Aligned_cols=84 Identities=32% Similarity=0.355 Sum_probs=54.8
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV 85 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~ 85 (470)
+.++++|+.|+|++|++++ +|. +.. ++|+.|+|++|+|++ ++ .+..+++|+.|++++|+|++. +.+..+++|+.
T Consensus 81 l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~ 154 (263)
T 1xeu_A 81 LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEV 154 (263)
T ss_dssp GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCE
T ss_pred hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCE
Confidence 7778888888888888875 333 222 667777777777763 33 366667777777777776643 34556666666
Q ss_pred ccccCCcccc
Q 040392 86 ESFEGNELLC 95 (470)
Q Consensus 86 l~~~~n~~~~ 95 (470)
|++++|++..
T Consensus 155 L~L~~N~i~~ 164 (263)
T 1xeu_A 155 LDLHGNEITN 164 (263)
T ss_dssp EECTTSCCCB
T ss_pred EECCCCcCcc
Confidence 6666666643
No 369
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.74 E-value=1.3e-08 Score=105.75 Aligned_cols=84 Identities=24% Similarity=0.327 Sum_probs=54.2
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCc
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFS 84 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~ 84 (470)
.+.+|++|+.|+|++|+|++. +.+..+++|+.|+|++|.|++. ..+..|++|+.|+|++|.|++.++ +..+++|+
T Consensus 104 ~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~ 178 (605)
T 1m9s_A 104 SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQ 178 (605)
T ss_dssp TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCC
T ss_pred hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCC
Confidence 566677777777777777643 3466666777777777766643 446666666666666666665555 55666666
Q ss_pred cccccCCcc
Q 040392 85 VESFEGNEL 93 (470)
Q Consensus 85 ~l~~~~n~~ 93 (470)
.|++++|++
T Consensus 179 ~L~Ls~N~i 187 (605)
T 1m9s_A 179 NLYLSKNHI 187 (605)
T ss_dssp EEECCSSCC
T ss_pred EEECcCCCC
Confidence 666666655
No 370
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.73 E-value=1.8e-08 Score=95.78 Aligned_cols=84 Identities=24% Similarity=0.325 Sum_probs=66.7
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV 85 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~ 85 (470)
+.++++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++ ++. +..+++|+.|++++|.+++..+ +..+++|+.
T Consensus 81 ~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~ 155 (308)
T 1h6u_A 81 LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQY 155 (308)
T ss_dssp GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCE
T ss_pred HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccE
Confidence 77888888888888888854 468888888888888888884 443 7888888888888888886554 677788888
Q ss_pred ccccCCccc
Q 040392 86 ESFEGNELL 94 (470)
Q Consensus 86 l~~~~n~~~ 94 (470)
|++++|.+.
T Consensus 156 L~l~~n~l~ 164 (308)
T 1h6u_A 156 LSIGNAQVS 164 (308)
T ss_dssp EECCSSCCC
T ss_pred EEccCCcCC
Confidence 888888764
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.73 E-value=1.7e-08 Score=104.75 Aligned_cols=84 Identities=35% Similarity=0.455 Sum_probs=56.1
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV 85 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~ 85 (470)
+.+|++|+.|+|++|.|++. +.+..+++|+.|+|++|.|++ + +.+..|++|+.|+|++|.|++. +.+..+++|+.
T Consensus 83 l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~ 157 (605)
T 1m9s_A 83 LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDT 157 (605)
T ss_dssp GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSE
T ss_pred hccCCCCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc-hhhcccCCCCE
Confidence 56677777777777777642 256667777777777777773 3 3466677777777777777644 55566677777
Q ss_pred ccccCCccc
Q 040392 86 ESFEGNELL 94 (470)
Q Consensus 86 l~~~~n~~~ 94 (470)
|++++|.+.
T Consensus 158 L~Ls~N~l~ 166 (605)
T 1m9s_A 158 LSLEDNQIS 166 (605)
T ss_dssp EECCSSCCC
T ss_pred EECcCCcCC
Confidence 777777664
No 372
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.72 E-value=4.5e-08 Score=93.61 Aligned_cols=136 Identities=16% Similarity=0.181 Sum_probs=100.8
Q ss_pred CCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCC----CcceeEEeeeccCCeeeEEEe
Q 040392 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRH----RNLIKVISTCSNEEFKALVLE 249 (470)
Q Consensus 174 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~~~~~~~~~~~~~lv~e 249 (470)
.....+.++.|..+.||++ |..+++|+.... .....+..|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5566778999999999998 667889976432 223457889998888865 234556655 45689999
Q ss_pred cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCC--------------------------------------
Q 040392 250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYS-------------------------------------- 291 (470)
Q Consensus 250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------------- 291 (470)
|++|.++..... ..++..+...++.++++.+..||....
T Consensus 108 ~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 999988864331 135666777788888888888883211
Q ss_pred ----------------------CCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392 292 ----------------------APIIHCDLKPSNVLLDDNMVAHLSDFSIAKL 322 (470)
Q Consensus 292 ----------------------~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~ 322 (470)
..++|+|++|.||+++.+..+.|+||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999876779999998854
No 373
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.72 E-value=5e-09 Score=100.15 Aligned_cols=84 Identities=20% Similarity=0.213 Sum_probs=44.9
Q ss_pred CCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCccccc-CCCCCCceecCCccccccCCCCCCCCCCcccc
Q 040392 9 LKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLE-KLSYLENLNLSFNKLEGEIPRGGPFRNFSVES 87 (470)
Q Consensus 9 l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~-~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~ 87 (470)
+++|+.|+|++|++++..|..+..+++|+.|+|++|.|++..+..+. .+++|+.|++++|.|++. +....+++|+.|+
T Consensus 119 ~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~ 197 (317)
T 3o53_A 119 GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLD 197 (317)
T ss_dssp CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEE
T ss_pred cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEE
Confidence 45555555555555544444555555555555555555544444442 455555555555555533 2233355555555
Q ss_pred ccCCcc
Q 040392 88 FEGNEL 93 (470)
Q Consensus 88 ~~~n~~ 93 (470)
+++|.+
T Consensus 198 Ls~N~l 203 (317)
T 3o53_A 198 LSSNKL 203 (317)
T ss_dssp CCSSCC
T ss_pred CCCCcC
Confidence 555554
No 374
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.71 E-value=1.7e-08 Score=97.70 Aligned_cols=81 Identities=20% Similarity=0.092 Sum_probs=72.8
Q ss_pred cEeeCcCC-cCCCCCCccccCCCCCCEEeccC-CcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCcccccc
Q 040392 13 EYLFLGYN-RLQGPIPDSFGDLISLKFLNLSN-NNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFSVESFE 89 (470)
Q Consensus 13 ~~l~l~~n-~l~~~~p~~~~~l~~L~~l~l~~-n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~~~ 89 (470)
..++++++ +|+ .+|. +..+++|+.|+|++ |.|++..+..|..|++|+.|+|++|+|++.++.. ..|++|+.|+++
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35799998 999 5788 99999999999996 9999777789999999999999999999988865 789999999999
Q ss_pred CCcccc
Q 040392 90 GNELLC 95 (470)
Q Consensus 90 ~n~~~~ 95 (470)
+|.+..
T Consensus 89 ~N~l~~ 94 (347)
T 2ifg_A 89 FNALES 94 (347)
T ss_dssp SSCCSC
T ss_pred CCccce
Confidence 999853
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.70 E-value=1.4e-10 Score=102.94 Aligned_cols=93 Identities=26% Similarity=0.283 Sum_probs=80.6
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC--CCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP--RGGP 79 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~--~~~~ 79 (470)
+| .+.++++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++ +| .+..+++|+.|++++|.|++..+ .+..
T Consensus 63 l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~ 138 (198)
T 1ds9_A 63 IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAA 138 (198)
T ss_dssp CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTT
T ss_pred cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhc
Confidence 45 7788999999999999999 778888888999999999999995 66 68899999999999999986443 5678
Q ss_pred CCCCccccccCCccccCCC
Q 040392 80 FRNFSVESFEGNELLCGSP 98 (470)
Q Consensus 80 l~~l~~l~~~~n~~~~~~~ 98 (470)
+++|+.+++++|++.+..|
T Consensus 139 l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 139 LDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp TTTCSEEEECSCHHHHHHH
T ss_pred CCCCCEEEecCCccccccc
Confidence 9999999999999866433
No 376
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.60 E-value=3.3e-07 Score=86.03 Aligned_cols=76 Identities=16% Similarity=0.112 Sum_probs=61.1
Q ss_pred CCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCC---cceeEEeeeccCCeeeEEEecCCC
Q 040392 177 ENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHR---NLIKVISTCSNEEFKALVLEYMPH 253 (470)
Q Consensus 177 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~~~~~~~~~~~~~lv~e~~~~ 253 (470)
..+.|+.|.++.||++...+|+.+++|+...........+..|++.++.+.+. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 35789999999999999888999999997543333346788999999999765 577888764 35899999999
Q ss_pred CCh
Q 040392 254 GSL 256 (470)
Q Consensus 254 g~L 256 (470)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 377
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.58 E-value=1.1e-07 Score=91.85 Aligned_cols=83 Identities=25% Similarity=0.357 Sum_probs=54.5
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV 85 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~ 85 (470)
+..+++|+.|+|++|++++. |. +..+++|++|+|++|.++ .+| .+..+++|+.|++++|.+++..+ +..+++|+.
T Consensus 62 ~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~-~~~-~~~~l~~L~~L~l~~n~i~~~~~-~~~l~~L~~ 136 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKIT-DIS-ALQNLTNLRELYLNEDNISDISP-LANLTKMYS 136 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECTTSCCCCCGG-GTTCTTCCE
T ss_pred hhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCccc-Cch-HHcCCCcCCEEECcCCcccCchh-hccCCceeE
Confidence 56667777777777777643 33 666777777777777776 343 46677777777777777764443 566667777
Q ss_pred ccccCCcc
Q 040392 86 ESFEGNEL 93 (470)
Q Consensus 86 l~~~~n~~ 93 (470)
+++++|..
T Consensus 137 L~l~~n~~ 144 (347)
T 4fmz_A 137 LNLGANHN 144 (347)
T ss_dssp EECTTCTT
T ss_pred EECCCCCC
Confidence 77776654
No 378
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.57 E-value=3.8e-08 Score=95.39 Aligned_cols=92 Identities=17% Similarity=0.170 Sum_probs=76.3
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCc-ccccCCCCCCc-eecCCccccccCCCC-C
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIP-ASLEKLSYLEN-LNLSFNKLEGEIPRG-G 78 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~-~~~~~l~~L~~-l~l~~N~l~~~~~~~-~ 78 (470)
+|.+| .++++.|+|++|+|+...+..|.++++|++|+|++|++.+.+| ..|.++++|.. +.+++|+|+..++.. .
T Consensus 24 iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~ 101 (350)
T 4ay9_X 24 IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQ 101 (350)
T ss_dssp CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBC
T ss_pred cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhh
Confidence 67666 3689999999999995555679999999999999999976666 56788998865 677789999877764 7
Q ss_pred CCCCCccccccCCcccc
Q 040392 79 PFRNFSVESFEGNELLC 95 (470)
Q Consensus 79 ~l~~l~~l~~~~n~~~~ 95 (470)
.+++|+.+++++|.+..
T Consensus 102 ~l~~L~~L~l~~n~l~~ 118 (350)
T 4ay9_X 102 NLPNLQYLLISNTGIKH 118 (350)
T ss_dssp CCTTCCEEEEEEECCSS
T ss_pred hcccccccccccccccc
Confidence 79999999999999854
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.57 E-value=6.2e-08 Score=97.68 Aligned_cols=84 Identities=29% Similarity=0.347 Sum_probs=49.1
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV 85 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~ 85 (470)
+..+++|+.|+|++|++++..| +..+++|+.|+|++|++++..| +..+++|+.|++++|.+++. +.+..+++|+.
T Consensus 283 ~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~ 357 (466)
T 1o6v_A 283 LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINW 357 (466)
T ss_dssp GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCE
T ss_pred ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCE
Confidence 5566666666666666664432 5566666666666666664443 55566666666666665543 34455555555
Q ss_pred ccccCCccc
Q 040392 86 ESFEGNELL 94 (470)
Q Consensus 86 l~~~~n~~~ 94 (470)
|++++|++.
T Consensus 358 L~l~~n~l~ 366 (466)
T 1o6v_A 358 LSAGHNQIS 366 (466)
T ss_dssp EECCSSCCC
T ss_pred EeCCCCccC
Confidence 555555553
No 380
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.57 E-value=1.2e-07 Score=95.31 Aligned_cols=80 Identities=23% Similarity=0.218 Sum_probs=38.4
Q ss_pred cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392 6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV 85 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~ 85 (470)
|+++++|+.|+|++|++++. | +..+++|+.|+|++|.|++ +| +..+++|+.|++++|.|++. + +..+++|+.
T Consensus 60 l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~l-~-~~~l~~L~~ 131 (457)
T 3bz5_A 60 IEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTKL-D-VSQNPLLTY 131 (457)
T ss_dssp GGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSCC-C-CTTCTTCCE
T ss_pred hcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCee-c-CCCCCcCCE
Confidence 44445555555555555432 2 4445555555555555553 22 44455555555555555432 2 444455555
Q ss_pred ccccCCcc
Q 040392 86 ESFEGNEL 93 (470)
Q Consensus 86 l~~~~n~~ 93 (470)
|++++|.+
T Consensus 132 L~l~~N~l 139 (457)
T 3bz5_A 132 LNCARNTL 139 (457)
T ss_dssp EECTTSCC
T ss_pred EECCCCcc
Confidence 55555544
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.57 E-value=5.9e-08 Score=97.87 Aligned_cols=85 Identities=21% Similarity=0.252 Sum_probs=71.5
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCc
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFS 84 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~ 84 (470)
.+..+++|+.|+|++|.+++. |+ +.++++|+.|+|++|.+++.. . +..+++|+.|++++|.+++.++ +..+++|+
T Consensus 63 ~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~-~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~ 137 (466)
T 1o6v_A 63 GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADIT-P-LANLTNLTGLTLFNNQITDIDP-LKNLTNLN 137 (466)
T ss_dssp TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCCCGG-GTTCTTCS
T ss_pred chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccCh-h-hcCCCCCCEEECCCCCCCCChH-HcCCCCCC
Confidence 467889999999999999955 44 889999999999999999544 4 8899999999999999986654 77889999
Q ss_pred cccccCCccc
Q 040392 85 VESFEGNELL 94 (470)
Q Consensus 85 ~l~~~~n~~~ 94 (470)
.|++++|.+.
T Consensus 138 ~L~l~~n~l~ 147 (466)
T 1o6v_A 138 RLELSSNTIS 147 (466)
T ss_dssp EEEEEEEEEC
T ss_pred EEECCCCccC
Confidence 9999988864
No 382
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.56 E-value=3.3e-07 Score=85.16 Aligned_cols=135 Identities=15% Similarity=0.062 Sum_probs=98.2
Q ss_pred CeecccCce-EEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CCcceeEEeeeccCCeeeEEEecCCCCC
Q 040392 179 NLIGRGGFG-SVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRNLIKVISTCSNEEFKALVLEYMPHGS 255 (470)
Q Consensus 179 ~~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~e~~~~g~ 255 (470)
+.+..|..| .||+.... ++..+++|+-... ....+..|...++.+. +-.+.++++++.+.+..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345556655 69998754 4678999986532 3456778999988884 4447788999988889999999999988
Q ss_pred hHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------------
Q 040392 256 LEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY--------------------------------------------- 290 (470)
Q Consensus 256 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------------- 290 (470)
+.+..... ......+..+++..|..||...
T Consensus 107 ~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 87665321 1233456667777777777310
Q ss_pred ----------CCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392 291 ----------SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321 (470)
Q Consensus 291 ----------~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 321 (470)
...++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1237999999999999988777899999875
No 383
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.55 E-value=4e-08 Score=101.03 Aligned_cols=76 Identities=29% Similarity=0.258 Sum_probs=50.5
Q ss_pred CCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCC----
Q 040392 8 GLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNF---- 83 (470)
Q Consensus 8 ~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l---- 83 (470)
.+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. +. ++|+.|++++|.|+..+. +.. +|
T Consensus 138 ~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~ 206 (571)
T 3cvr_A 138 LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSE 206 (571)
T ss_dssp CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC---------
T ss_pred cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhccc
Confidence 46677777777777774 454 46777788888887774 665 54 777777777777774443 322 55
Q ss_pred ---ccccccCCccc
Q 040392 84 ---SVESFEGNELL 94 (470)
Q Consensus 84 ---~~l~~~~n~~~ 94 (470)
+.|++++|.+.
T Consensus 207 ~~L~~L~Ls~N~l~ 220 (571)
T 3cvr_A 207 ETEIFFRCRENRIT 220 (571)
T ss_dssp -CCEEEECCSSCCC
T ss_pred ccceEEecCCCcce
Confidence 77777777764
No 384
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.55 E-value=4.1e-07 Score=86.30 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=95.2
Q ss_pred CCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCC---cceeEEeeec-cCCeeeEEEecCCC
Q 040392 178 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHR---NLIKVISTCS-NEEFKALVLEYMPH 253 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~~~~~~~-~~~~~~lv~e~~~~ 253 (470)
.+.++.|....||+. |..+++|... .......+..|.++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888999999998 5678888853 223456788899999999642 3567777763 45567899999999
Q ss_pred CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 040392 254 GSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG-------------------------------------------- 289 (470)
Q Consensus 254 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-------------------------------------------- 289 (470)
.++.+.... .++......++.++++.|..||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888653211 234445555555555555555521
Q ss_pred -------------CCCCeeecCCCCCCeeeCC---CCC-eEEeeeccccc
Q 040392 290 -------------YSAPIIHCDLKPSNVLLDD---NMV-AHLSDFSIAKL 322 (470)
Q Consensus 290 -------------~~~~i~H~dlkp~Nill~~---~~~-~kl~Dfg~a~~ 322 (470)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1335799999999999987 455 48999998753
No 385
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.52 E-value=9.8e-08 Score=95.91 Aligned_cols=86 Identities=20% Similarity=0.171 Sum_probs=76.1
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRN 82 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~ 82 (470)
+..++++++|+.|+|++|.+++. | .+..+++|+.|+|++|.|++ +| +..+++|+.|++++|.|++. + +..+++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~ 107 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTK 107 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTT
T ss_pred ccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCc
Confidence 34567899999999999999965 5 79999999999999999996 44 89999999999999999975 3 788999
Q ss_pred CccccccCCcccc
Q 040392 83 FSVESFEGNELLC 95 (470)
Q Consensus 83 l~~l~~~~n~~~~ 95 (470)
|+.|++++|.+..
T Consensus 108 L~~L~L~~N~l~~ 120 (457)
T 3bz5_A 108 LTYLNCDTNKLTK 120 (457)
T ss_dssp CCEEECCSSCCSC
T ss_pred CCEEECCCCcCCe
Confidence 9999999998753
No 386
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.50 E-value=2.1e-07 Score=95.65 Aligned_cols=73 Identities=25% Similarity=0.285 Sum_probs=34.5
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFE 89 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~ 89 (470)
++|+.|+|++|+|+ .+| ..+++|+.|+|++|.|++ +|. +.. +|+.|++++|.|++.++ .+++|+.|+++
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls 148 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTMLPE---LPALLEYINAD 148 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSCCCC---CCTTCCEEECC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCCCCC---cCccccEEeCC
Confidence 44555555555555 344 234555555555555553 443 332 45555555555544222 34444444444
Q ss_pred CCcc
Q 040392 90 GNEL 93 (470)
Q Consensus 90 ~n~~ 93 (470)
+|.+
T Consensus 149 ~N~l 152 (571)
T 3cvr_A 149 NNQL 152 (571)
T ss_dssp SSCC
T ss_pred CCcc
Confidence 4443
No 387
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.49 E-value=3.5e-07 Score=88.74 Aligned_cols=80 Identities=8% Similarity=-0.030 Sum_probs=57.4
Q ss_pred Cee-cccCceEEEEEEeC-------CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCC-C--CcceeEEeeeccC---
Q 040392 179 NLI-GRGGFGSVYKARLG-------DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIR-H--RNLIKVISTCSNE--- 241 (470)
Q Consensus 179 ~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~nIv~~~~~~~~~--- 241 (470)
+.| +.|....+|+.... ++..+++|...... ......+..|+.+++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 567 88989999998754 26789999865432 112356788999998884 3 3577888887655
Q ss_pred CeeeEEEecCCCCChHH
Q 040392 242 EFKALVLEYMPHGSLEK 258 (470)
Q Consensus 242 ~~~~lv~e~~~~g~L~~ 258 (470)
+..++||||++|.++.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877653
No 388
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.47 E-value=6.1e-08 Score=89.32 Aligned_cols=66 Identities=33% Similarity=0.352 Sum_probs=35.3
Q ss_pred CCCCCcEeeCcCCcCCC--CCCccccCCCCCCEEeccCCcCCCCCcccccCCC--CCCceecCCccccccCC
Q 040392 8 GLKNLEYLFLGYNRLQG--PIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLS--YLENLNLSFNKLEGEIP 75 (470)
Q Consensus 8 ~l~~l~~l~l~~n~l~~--~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~--~L~~l~l~~N~l~~~~~ 75 (470)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+.+.++
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 35566666666666664 2234444566666666666666632 2233333 56666666666654433
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.45 E-value=8.7e-09 Score=101.28 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=47.8
Q ss_pred cCCCCCCcEeeCcCCcCC--C---CCCccccCCCCCCEEeccCCcCC----CCCcccccCCCCCCceecCCcccccc---
Q 040392 6 IGGLKNLEYLFLGYNRLQ--G---PIPDSFGDLISLKFLNLSNNNLS----GAIPASLEKLSYLENLNLSFNKLEGE--- 73 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~--~---~~p~~~~~l~~L~~l~l~~n~i~----~~~~~~~~~l~~L~~l~l~~N~l~~~--- 73 (470)
+.++++|+.|+|++|+++ | ..|..+..+++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|.|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 445556666666666655 1 22225555666666666666663 34555556666666666666665533
Q ss_pred -C-CCC--CCCCCCccccccCCcc
Q 040392 74 -I-PRG--GPFRNFSVESFEGNEL 93 (470)
Q Consensus 74 -~-~~~--~~l~~l~~l~~~~n~~ 93 (470)
+ ..+ ..+++|+.|++++|.+
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i 286 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEI 286 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCC
T ss_pred HHHHHHhhccCCCeEEEECcCCcC
Confidence 1 111 2255566666666655
No 390
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.42 E-value=9e-07 Score=85.95 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=56.8
Q ss_pred CCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCc--ceeEEeeeccC-CeeeEEEecCCC
Q 040392 177 ENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN--LIKVISTCSNE-EFKALVLEYMPH 253 (470)
Q Consensus 177 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~~~~~~~~~-~~~~lv~e~~~~ 253 (470)
..+.++.|....+|+.+. ++..+++|..... ..+..|+.+++.+.... +.+++.++... +..++||||++|
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 356789999999999986 5889999987432 24778999998886433 56777776654 668899999998
Q ss_pred CChH
Q 040392 254 GSLE 257 (470)
Q Consensus 254 g~L~ 257 (470)
.++.
T Consensus 119 ~~l~ 122 (362)
T 3ovc_A 119 VTLQ 122 (362)
T ss_dssp EETT
T ss_pred CCcc
Confidence 6654
No 391
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.40 E-value=2.5e-08 Score=95.86 Aligned_cols=81 Identities=17% Similarity=0.173 Sum_probs=41.6
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCC-CcccccCCCCCCceecCCccccccCC-CCCCCCCCcccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGA-IPASLEKLSYLENLNLSFNKLEGEIP-RGGPFRNFSVES 87 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~l~~l~~l~ 87 (470)
++++.|++++|.+++.++. +..+++|+.|+|++|.+++. +|..+..+++|+.|++++|.+++..+ .+..+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4555555555555544333 33455555555555555533 44455555555555555555543222 223455555555
Q ss_pred ccCC
Q 040392 88 FEGN 91 (470)
Q Consensus 88 ~~~n 91 (470)
+++|
T Consensus 149 L~~~ 152 (336)
T 2ast_B 149 LSGC 152 (336)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 5555
No 392
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.38 E-value=4.6e-08 Score=95.24 Aligned_cols=92 Identities=23% Similarity=0.146 Sum_probs=73.8
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCC----ccccCCC-CCCEEeccCCcCCCCCcccccCC-----CCCCceecCCccccc
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIP----DSFGDLI-SLKFLNLSNNNLSGAIPASLEKL-----SYLENLNLSFNKLEG 72 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p----~~~~~l~-~L~~l~l~~n~i~~~~~~~~~~l-----~~L~~l~l~~N~l~~ 72 (470)
|..+...++|+.|+|++|.+++..+ ..+.+++ +|+.|+|++|.|++..+..+..+ ++|+.|++++|.|++
T Consensus 15 ~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 94 (362)
T 3goz_A 15 EEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSY 94 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred HHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCCh
Confidence 3344556679999999999997666 6788888 89999999999997777777665 899999999999986
Q ss_pred cCCC-----CCCC-CCCccccccCCccc
Q 040392 73 EIPR-----GGPF-RNFSVESFEGNELL 94 (470)
Q Consensus 73 ~~~~-----~~~l-~~l~~l~~~~n~~~ 94 (470)
..+. +..+ ++|+.|++++|.+.
T Consensus 95 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 122 (362)
T 3goz_A 95 KSSDELVKTLAAIPFTITVLDLGWNDFS 122 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECCSSCGG
T ss_pred HHHHHHHHHHHhCCCCccEEECcCCcCC
Confidence 6554 2344 78999999999874
No 393
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.36 E-value=5.3e-07 Score=93.76 Aligned_cols=54 Identities=30% Similarity=0.174 Sum_probs=32.1
Q ss_pred CCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCccccccCCccc
Q 040392 34 ISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFEGNELL 94 (470)
Q Consensus 34 ~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~~~ 94 (470)
++|+.|+|++|.|++ +| ..+++|+.|++++|.|+..++ .+++|+.|++++|.+.
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC
Confidence 556666666666663 44 344666666666666664333 4556666666666654
No 394
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.35 E-value=7.1e-07 Score=92.82 Aligned_cols=79 Identities=23% Similarity=0.240 Sum_probs=52.9
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR 81 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~ 81 (470)
+|..+. ++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|. .+++|+.|++++|.|++.++ .++
T Consensus 55 lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~---~l~ 121 (622)
T 3g06_A 55 LPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA---LPS 121 (622)
T ss_dssp CCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC---CCT
T ss_pred cChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC---CCC
Confidence 455554 67788888888877 4554 4677778888888877 4554 56777777777777775444 345
Q ss_pred CCccccccCCcc
Q 040392 82 NFSVESFEGNEL 93 (470)
Q Consensus 82 ~l~~l~~~~n~~ 93 (470)
+|+.|++++|.+
T Consensus 122 ~L~~L~L~~N~l 133 (622)
T 3g06_A 122 GLCKLWIFGNQL 133 (622)
T ss_dssp TCCEEECCSSCC
T ss_pred CcCEEECCCCCC
Confidence 566666666654
No 395
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.34 E-value=1.1e-06 Score=88.24 Aligned_cols=77 Identities=27% Similarity=0.370 Sum_probs=36.3
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFE 89 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~ 89 (470)
++|+.|+|++|++++ +| .+.++++|++|++++|++++ +|..+ ++|+.|++++|.+++ +|.+..+++|+.++++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPELQNLPFLTAIYAD 203 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-CccccCCCCCCEEECC
Confidence 355555555555553 34 35555555555555555552 33321 244444555444443 2234444444444444
Q ss_pred CCcc
Q 040392 90 GNEL 93 (470)
Q Consensus 90 ~n~~ 93 (470)
+|.+
T Consensus 204 ~N~l 207 (454)
T 1jl5_A 204 NNSL 207 (454)
T ss_dssp SSCC
T ss_pred CCcC
Confidence 4443
No 396
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.31 E-value=1.2e-06 Score=87.80 Aligned_cols=77 Identities=25% Similarity=0.338 Sum_probs=52.0
Q ss_pred CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcccccc
Q 040392 10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFE 89 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~ 89 (470)
++|+.|++++|++++ +|.. .++|++|+|++|++++ +| .+..+++|+.|++++|.+++.+.. ..+|+.|+++
T Consensus 111 ~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~~---~~~L~~L~L~ 181 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPDL---PPSLEFIAAG 181 (454)
T ss_dssp TTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCCC---CTTCCEEECC
T ss_pred CCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCCC---cccccEEECc
Confidence 456666666666653 2221 1578888888888884 66 488888888888888888764332 3578888888
Q ss_pred CCcccc
Q 040392 90 GNELLC 95 (470)
Q Consensus 90 ~n~~~~ 95 (470)
+|.+..
T Consensus 182 ~n~l~~ 187 (454)
T 1jl5_A 182 NNQLEE 187 (454)
T ss_dssp SSCCSS
T ss_pred CCcCCc
Confidence 887643
No 397
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.29 E-value=3.2e-08 Score=95.14 Aligned_cols=91 Identities=18% Similarity=0.059 Sum_probs=76.1
Q ss_pred CcccCCCCCCcEeeCcCCcCCCC-CCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCc-cccc--cCCCCC
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGP-IPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFN-KLEG--EIPRGG 78 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~-~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N-~l~~--~~~~~~ 78 (470)
+..+.++++|+.|+|++|.+++. +|..+..+++|+.|+|++|.+++..+..+..+++|+.|++++| .+++ ....+.
T Consensus 86 ~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~ 165 (336)
T 2ast_B 86 LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLS 165 (336)
T ss_dssp CCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHH
T ss_pred chhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHh
Confidence 34466789999999999998865 7788899999999999999999888888999999999999999 6774 233346
Q ss_pred CCCCCccccccCC-cc
Q 040392 79 PFRNFSVESFEGN-EL 93 (470)
Q Consensus 79 ~l~~l~~l~~~~n-~~ 93 (470)
.+++|+.|++++| .+
T Consensus 166 ~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 166 SCSRLDELNLSWCFDF 181 (336)
T ss_dssp HCTTCCEEECCCCTTC
T ss_pred cCCCCCEEcCCCCCCc
Confidence 7889999999998 65
No 398
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.24 E-value=1.1e-07 Score=93.37 Aligned_cols=92 Identities=16% Similarity=0.132 Sum_probs=72.6
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCC----ccccCCCCCCEEeccCC---cCCCCCcccc-------cCCCCCCceecCC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIP----DSFGDLISLKFLNLSNN---NLSGAIPASL-------EKLSYLENLNLSF 67 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p----~~~~~l~~L~~l~l~~n---~i~~~~~~~~-------~~l~~L~~l~l~~ 67 (470)
++..+..+++|+.|+|++|.+++..+ ..+..+++|+.|+|++| ++++.+|..+ ..+++|+.|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 45567788999999999999986533 44778999999999996 4555566555 6899999999999
Q ss_pred ccccc-----cCCCCCCCCCCccccccCCcc
Q 040392 68 NKLEG-----EIPRGGPFRNFSVESFEGNEL 93 (470)
Q Consensus 68 N~l~~-----~~~~~~~l~~l~~l~~~~n~~ 93 (470)
|.|++ .+..+..+++|+.|++++|.+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l 134 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 134 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCC
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCC
Confidence 99986 233346788999999999987
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.23 E-value=6.6e-08 Score=89.08 Aligned_cols=85 Identities=27% Similarity=0.244 Sum_probs=63.5
Q ss_pred CCCCCcE--eeCcCCcCCCCCCc----cccCCCCCCEEeccCCcCCC--CCcccccCCCCCCceecCCccccccCCCCCC
Q 040392 8 GLKNLEY--LFLGYNRLQGPIPD----SFGDLISLKFLNLSNNNLSG--AIPASLEKLSYLENLNLSFNKLEGEIPRGGP 79 (470)
Q Consensus 8 ~l~~l~~--l~l~~n~l~~~~p~----~~~~l~~L~~l~l~~n~i~~--~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 79 (470)
..+.|.. ++++.|... .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..
T Consensus 139 ~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~ 216 (267)
T 3rw6_A 139 SDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDK 216 (267)
T ss_dssp GCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGG
T ss_pred CCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhh
Confidence 3344444 677778543 3332 22568999999999999997 4557778999999999999999964 33444
Q ss_pred CC--CCccccccCCccc
Q 040392 80 FR--NFSVESFEGNELL 94 (470)
Q Consensus 80 l~--~l~~l~~~~n~~~ 94 (470)
++ +|+.|++.+|++.
T Consensus 217 l~~l~L~~L~L~~Npl~ 233 (267)
T 3rw6_A 217 IKGLKLEELWLDGNSLC 233 (267)
T ss_dssp GTTSCCSEEECTTSTTG
T ss_pred cccCCcceEEccCCcCc
Confidence 44 8999999999974
No 400
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.23 E-value=1.1e-06 Score=84.96 Aligned_cols=91 Identities=21% Similarity=0.144 Sum_probs=71.9
Q ss_pred CC-cccCCCCCCcEeeCcCCcCCCCCC-ccccCCCCCCE-EeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-
Q 040392 2 IP-TEIGGLKNLEYLFLGYNRLQGPIP-DSFGDLISLKF-LNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG- 77 (470)
Q Consensus 2 ~p-~~~~~l~~l~~l~l~~n~l~~~~p-~~~~~l~~L~~-l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~- 77 (470)
+| +.|.+|++|+.|+|++|++.+.+| ..|.++++|.. +++++|+|++..|+.|..+++|+.|++++|.|+..++..
T Consensus 45 i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~ 124 (350)
T 4ay9_X 45 IQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 124 (350)
T ss_dssp ECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT
T ss_pred cCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhh
Confidence 44 468999999999999999876555 46889998865 667789999777889999999999999999999666543
Q ss_pred CCCCCCccccccCCc
Q 040392 78 GPFRNFSVESFEGNE 92 (470)
Q Consensus 78 ~~l~~l~~l~~~~n~ 92 (470)
....++..+++.++.
T Consensus 125 ~~~~~l~~l~l~~~~ 139 (350)
T 4ay9_X 125 IHSLQKVLLDIQDNI 139 (350)
T ss_dssp CCBSSCEEEEEESCT
T ss_pred cccchhhhhhhcccc
Confidence 344556677775543
No 401
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.18 E-value=8.2e-06 Score=80.25 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=49.8
Q ss_pred CCeecccCceEEEEEEeC-CCcEEEEEEeecccc-------hhhhhHHHHHHHHhcCCC--C-cceeEEeeeccCCeeeE
Q 040392 178 NNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-------RALKGFDVECEMMKSIRH--R-NLIKVISTCSNEEFKAL 246 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-nIv~~~~~~~~~~~~~l 246 (470)
.+.||.|..+.||+++.. +++.++||....... .....+..|.++++.+.. + .+.+++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467999999999999754 468899998653211 123456779999887742 3 344566543 344579
Q ss_pred EEecCCCC
Q 040392 247 VLEYMPHG 254 (470)
Q Consensus 247 v~e~~~~g 254 (470)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 402
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.16 E-value=1.7e-07 Score=91.20 Aligned_cols=91 Identities=21% Similarity=0.204 Sum_probs=73.2
Q ss_pred cccCCCC-CCcEeeCcCCcCCCCCCccccCC-----CCCCEEeccCCcCCCCCcccc----cCC-CCCCceecCCccccc
Q 040392 4 TEIGGLK-NLEYLFLGYNRLQGPIPDSFGDL-----ISLKFLNLSNNNLSGAIPASL----EKL-SYLENLNLSFNKLEG 72 (470)
Q Consensus 4 ~~~~~l~-~l~~l~l~~n~l~~~~p~~~~~l-----~~L~~l~l~~n~i~~~~~~~~----~~l-~~L~~l~l~~N~l~~ 72 (470)
..+.+++ +|+.|+|++|.+++..+..+..+ ++|+.|+|++|.|++..+..+ ..+ ++|+.|++++|.|++
T Consensus 44 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 123 (362)
T 3goz_A 44 QAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS 123 (362)
T ss_dssp HHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred HHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc
Confidence 3456777 89999999999998777777775 999999999999997766644 444 899999999999986
Q ss_pred cCCCC-----CC-CCCCccccccCCccc
Q 040392 73 EIPRG-----GP-FRNFSVESFEGNELL 94 (470)
Q Consensus 73 ~~~~~-----~~-l~~l~~l~~~~n~~~ 94 (470)
..... .. .++|+.|++++|.+.
T Consensus 124 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 151 (362)
T 3goz_A 124 KSSSEFKQAFSNLPASITSLNLRGNDLG 151 (362)
T ss_dssp SCHHHHHHHHTTSCTTCCEEECTTSCGG
T ss_pred HHHHHHHHHHHhCCCceeEEEccCCcCC
Confidence 55431 23 368999999999884
No 403
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.08 E-value=1.6e-05 Score=76.18 Aligned_cols=138 Identities=16% Similarity=0.165 Sum_probs=78.7
Q ss_pred CeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCC--CcceeEEee------eccCCeeeEEEec
Q 040392 179 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRH--RNLIKVIST------CSNEEFKALVLEY 250 (470)
Q Consensus 179 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~~~~~------~~~~~~~~lv~e~ 250 (470)
+.|+.|..+.||++...+| .+++|+.... ...+..|..+++.|.. -.+.+++.. ....+..+++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566678899999987655 5899988642 1233345555555531 123344431 1235667899999
Q ss_pred CCCCChH-----H---------hhhc--CCC-----------CCCHHHH-------------------------------
Q 040392 251 MPHGSLE-----K---------YMYS--SNY-----------ILDIFQR------------------------------- 272 (470)
Q Consensus 251 ~~~g~L~-----~---------~l~~--~~~-----------~~~~~~~------------------------------- 272 (470)
++|.++. + .++. ... ...|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 1111 000 0122110
Q ss_pred HHHHHHHHHHHHHHhc----------CCCCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392 273 LNIMIDVASALEYLHF----------GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321 (470)
Q Consensus 273 ~~i~~~i~~~L~~LH~----------~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 321 (470)
..+...+..++.+|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345566652 125789999999999999888899999999774
No 404
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=98.03 E-value=3.1e-05 Score=72.44 Aligned_cols=79 Identities=15% Similarity=0.106 Sum_probs=58.4
Q ss_pred CCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCC-C--CcceeEEeeeccCCeeeEEEec
Q 040392 174 GFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-H--RNLIKVISTCSNEEFKALVLEY 250 (470)
Q Consensus 174 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h--~nIv~~~~~~~~~~~~~lv~e~ 250 (470)
....++.+|.|..+.||+.+..+|+.|++|+...........+..|+..|+.|. . -.+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 344467899999999999999999999999876544444456788999998884 2 2355666653 23689999
Q ss_pred CCCCCh
Q 040392 251 MPHGSL 256 (470)
Q Consensus 251 ~~~g~L 256 (470)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 405
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.86 E-value=0.00013 Score=68.83 Aligned_cols=136 Identities=13% Similarity=0.090 Sum_probs=91.4
Q ss_pred CCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCC---CCcceeEEeeeccCCeeeEEEecCCCC
Q 040392 178 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR---HRNLIKVISTCSNEEFKALVLEYMPHG 254 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~~~~~~~~~~~~~lv~e~~~~g 254 (470)
.+.|+.|....+|+... ++..+++|+.... ....+..|++.|+.|. ...+.+++.++...+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 46789999999999986 5778999987633 3456788999888884 366888998888778899999999987
Q ss_pred ChHH-----------hhhcCCC---------------------CCCHHHHH---HHH----------------HHHHHH-
Q 040392 255 SLEK-----------YMYSSNY---------------------ILDIFQRL---NIM----------------IDVASA- 282 (470)
Q Consensus 255 ~L~~-----------~l~~~~~---------------------~~~~~~~~---~i~----------------~~i~~~- 282 (470)
.+.. .++.... .-+|.... ++. ..++..
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6421 1121110 11343221 111 111111
Q ss_pred HHHHh-cCCCCCeeecCCCCCCeeeCCCCCeEEeeec
Q 040392 283 LEYLH-FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFS 318 (470)
Q Consensus 283 L~~LH-~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg 318 (470)
...|. ......++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 22342 12246799999999999999887 8899974
No 406
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.83 E-value=1.1e-06 Score=88.16 Aligned_cols=92 Identities=20% Similarity=0.131 Sum_probs=60.1
Q ss_pred CcccCCCCCCcEeeCcCCcCCCCCCccccC-----CCCCCEEeccCCcCCCC----CcccccCCCCCCceecCCcccccc
Q 040392 3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGD-----LISLKFLNLSNNNLSGA----IPASLEKLSYLENLNLSFNKLEGE 73 (470)
Q Consensus 3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~-----l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l~~N~l~~~ 73 (470)
+..+.++++|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++..+..+++|+.|++++|.|++.
T Consensus 277 ~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 277 CRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred HHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 445566788888888888876443333322 25788888888887754 455666778888888888877643
Q ss_pred CCC-CC-----CCCCCccccccCCccc
Q 040392 74 IPR-GG-----PFRNFSVESFEGNELL 94 (470)
Q Consensus 74 ~~~-~~-----~l~~l~~l~~~~n~~~ 94 (470)
.+. +. ..++|+.|++++|.+.
T Consensus 357 ~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 357 GVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred cHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 221 11 2557777777777763
No 407
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.79 E-value=1.4e-06 Score=87.41 Aligned_cols=87 Identities=20% Similarity=0.122 Sum_probs=47.0
Q ss_pred CCCCCCcEeeCcCCcCCC----CCCccccCCCCCCEEeccCCcCCCCCcccc-cCCC----CCCceecCCccccc-----
Q 040392 7 GGLKNLEYLFLGYNRLQG----PIPDSFGDLISLKFLNLSNNNLSGAIPASL-EKLS----YLENLNLSFNKLEG----- 72 (470)
Q Consensus 7 ~~l~~l~~l~l~~n~l~~----~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~-~~l~----~L~~l~l~~N~l~~----- 72 (470)
..+++|+.|+|++|.+++ .++..+..+++|+.|+|++|.+++..+..+ ..++ +|+.|++++|.|+.
T Consensus 25 ~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~ 104 (461)
T 1z7x_W 25 PLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGV 104 (461)
T ss_dssp HHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHH
Confidence 445666666666666653 234455556666666666666654322222 2233 46666666666652
Q ss_pred cCCCCCCCCCCccccccCCcc
Q 040392 73 EIPRGGPFRNFSVESFEGNEL 93 (470)
Q Consensus 73 ~~~~~~~l~~l~~l~~~~n~~ 93 (470)
.+..+..+++|+.|++++|.+
T Consensus 105 l~~~l~~~~~L~~L~Ls~n~i 125 (461)
T 1z7x_W 105 LSSTLRTLPTLQELHLSDNLL 125 (461)
T ss_dssp HHHHTTSCTTCCEEECCSSBC
T ss_pred HHHHHccCCceeEEECCCCcC
Confidence 122334556666666666654
No 408
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.75 E-value=2.5e-05 Score=74.57 Aligned_cols=85 Identities=15% Similarity=0.032 Sum_probs=72.1
Q ss_pred CCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCC-ceecCCccccccCCC-CCCCCCCccc
Q 040392 9 LKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLE-NLNLSFNKLEGEIPR-GGPFRNFSVE 86 (470)
Q Consensus 9 l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~-~l~l~~N~l~~~~~~-~~~l~~l~~l 86 (470)
+++|+.|+|++|+++.+.+..|.++.+|+.|+|++| ++...+..|..|++|+ .|++++ .++...+. ...+.+|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 789999999999999666667999999999999998 8766678899999999 999999 66644443 4678999999
Q ss_pred cccCCcccc
Q 040392 87 SFEGNELLC 95 (470)
Q Consensus 87 ~~~~n~~~~ 95 (470)
++.+|.+..
T Consensus 303 ~l~~n~i~~ 311 (329)
T 3sb4_A 303 LATGDKITT 311 (329)
T ss_dssp EECSSCCCE
T ss_pred EeCCCccCc
Confidence 998888743
No 409
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.73 E-value=2.2e-06 Score=83.53 Aligned_cols=62 Identities=23% Similarity=0.331 Sum_probs=28.0
Q ss_pred CCCcEeeCcCCcCCC----CCCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceecCCcccc
Q 040392 10 KNLEYLFLGYNRLQG----PIPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNLSFNKLE 71 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~----~~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l~~N~l~ 71 (470)
++|+.|+|++|.|+. .++..+..+++|++|+|++|.|++. ++..+..+++|+.|+|++|.|+
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 445555555555432 1222334444555555555555421 1233444445555555555554
No 410
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.71 E-value=0.00012 Score=72.36 Aligned_cols=78 Identities=13% Similarity=0.122 Sum_probs=47.9
Q ss_pred CCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcccccccc--cCccccCccccCCC---CCCCccchhhHHHHH
Q 040392 291 SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTL--ATIGYMAPEYGREG---RVSTNGDVYSFGIML 365 (470)
Q Consensus 291 ~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~--~t~~y~aPE~~~~~---~~~~~~DvwslGv~l 365 (470)
...++|||++|.||+++.++ ++++||+.+..-.+ ...-.... -...|++|+..... ......++.+....+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p---~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPM---GFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECH---HHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCch---HHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 67899999999999998876 99999998864211 10000111 11345566544311 112234556777788
Q ss_pred HHHHhCC
Q 040392 366 METFTGK 372 (470)
Q Consensus 366 ~el~tg~ 372 (470)
|+.+++.
T Consensus 307 ~~~y~~~ 313 (420)
T 2pyw_A 307 WNLFNKR 313 (420)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777654
No 411
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.67 E-value=4.1e-05 Score=73.10 Aligned_cols=83 Identities=14% Similarity=-0.052 Sum_probs=70.4
Q ss_pred cccCCCCCCcEeeCcCCcCCCCCCccccCCCCCC-EEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCC
Q 040392 4 TEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLK-FLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFR 81 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~-~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~ 81 (470)
..|.++++|+.|+|++| ++.+.+.+|.++.+|+ .++|++ .++..-+.+|..|++|+.|++++|.++...+.. ..++
T Consensus 244 ~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~ 321 (329)
T 3sb4_A 244 FTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGV 321 (329)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTC
T ss_pred hhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCc
Confidence 35889999999999998 7766677899999999 999999 777566789999999999999999998666644 5678
Q ss_pred CCccccc
Q 040392 82 NFSVESF 88 (470)
Q Consensus 82 ~l~~l~~ 88 (470)
+|+.++.
T Consensus 322 ~L~~ly~ 328 (329)
T 3sb4_A 322 PSKLIYK 328 (329)
T ss_dssp CCCEEEC
T ss_pred chhhhcc
Confidence 8887764
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.67 E-value=6.1e-06 Score=71.88 Aligned_cols=88 Identities=14% Similarity=0.133 Sum_probs=67.1
Q ss_pred cCCCCCCcEeeCcCC-cCCCC----CCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceecCCcccccc---
Q 040392 6 IGGLKNLEYLFLGYN-RLQGP----IPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNLSFNKLEGE--- 73 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n-~l~~~----~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l~~N~l~~~--- 73 (470)
+.+.++|+.|+|++| .|... +...+...++|++|+|++|.|+.. +...+...++|+.|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 456789999999999 88732 345566778999999999999742 334566678999999999998742
Q ss_pred --CCCCCCCCCCccccc--cCCcc
Q 040392 74 --IPRGGPFRNFSVESF--EGNEL 93 (470)
Q Consensus 74 --~~~~~~l~~l~~l~~--~~n~~ 93 (470)
...+...++|+.|++ ++|.+
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i 135 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPL 135 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCC
T ss_pred HHHHHHHhCCCceEEEecCCCCCC
Confidence 233455678999999 77887
No 413
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.66 E-value=0.00014 Score=69.02 Aligned_cols=157 Identities=15% Similarity=0.154 Sum_probs=87.4
Q ss_pred ccCHHHHHHhhCCCCCC-----CeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCc--ceeE
Q 040392 162 TFSHLELCRATDGFSEN-----NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN--LIKV 234 (470)
Q Consensus 162 ~~~~~~~~~~~~~~~~~-----~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~~ 234 (470)
..+..++......|... +.|+.|....+|+....+| .+++|..... .....+..|..+++.+.... +.++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 34555666656666552 3466788899999987655 6889988642 12334556777777764222 3333
Q ss_pred Eeee------ccCCeeeEEEecCCCCChHH----h----------hhcC--C--CC----C---CHHHHHH---------
Q 040392 235 ISTC------SNEEFKALVLEYMPHGSLEK----Y----------MYSS--N--YI----L---DIFQRLN--------- 274 (470)
Q Consensus 235 ~~~~------~~~~~~~lv~e~~~~g~L~~----~----------l~~~--~--~~----~---~~~~~~~--------- 274 (470)
+... ...+..+++++|++|..+.. . ++.. . .. . .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 3221 12355689999999865321 0 1110 0 00 0 1111000
Q ss_pred ---HHHHHHHHHHHHhc----CCCCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392 275 ---IMIDVASALEYLHF----GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321 (470)
Q Consensus 275 ---i~~~i~~~L~~LH~----~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 321 (470)
+...+.+.+++++. ....+++|+|+++.||+++++..+.++||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113344445442 123579999999999999987666899998775
No 414
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.65 E-value=0.00021 Score=67.18 Aligned_cols=71 Identities=10% Similarity=0.053 Sum_probs=46.4
Q ss_pred CCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcc-eeEEeeeccCCeeeEEEecC-CCCC
Q 040392 178 NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL-IKVISTCSNEEFKALVLEYM-PHGS 255 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~~~~~~~~~~~~~lv~e~~-~~g~ 255 (470)
.+.|+.|....+|+. ..+++|+...... .......|+.+++.+...++ .+++++.. +..++++||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~-~~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTE-EYINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCcc-ceeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCcc
Confidence 678999999999999 5688998764322 22334568888877743222 46666543 3346899999 6654
Q ss_pred h
Q 040392 256 L 256 (470)
Q Consensus 256 L 256 (470)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 415
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.62 E-value=3.8e-06 Score=81.80 Aligned_cols=84 Identities=18% Similarity=0.107 Sum_probs=49.0
Q ss_pred CCCcEeeCcCCcCCCCCCccc-cCCCCCCEEeccCCcCCCCCcccc-----cCCCCCCceecCCcccccc-----CCCCC
Q 040392 10 KNLEYLFLGYNRLQGPIPDSF-GDLISLKFLNLSNNNLSGAIPASL-----EKLSYLENLNLSFNKLEGE-----IPRGG 78 (470)
Q Consensus 10 ~~l~~l~l~~n~l~~~~p~~~-~~l~~L~~l~l~~n~i~~~~~~~~-----~~l~~L~~l~l~~N~l~~~-----~~~~~ 78 (470)
++|+.|+|++|.++......+ ..+++|+.|+|++|.|++.....+ ...++|+.|+|++|.|+.. ...+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 577777777777763222222 234567777777777764332322 2456677777777776531 11113
Q ss_pred CCCCCccccccCCcc
Q 040392 79 PFRNFSVESFEGNEL 93 (470)
Q Consensus 79 ~l~~l~~l~~~~n~~ 93 (470)
.+++|+.|++++|.+
T Consensus 181 ~~~~L~~L~Ls~N~l 195 (372)
T 3un9_A 181 GNTSVTHLSLLHTGL 195 (372)
T ss_dssp TCSSCCEEECTTSSC
T ss_pred cCCCcCEEeCCCCCC
Confidence 456677777777765
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.62 E-value=4.6e-06 Score=72.68 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=68.9
Q ss_pred ccCCCCCCcEeeCcCCcCCCC----CCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceec--CCccccccC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGP----IPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNL--SFNKLEGEI 74 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l--~~N~l~~~~ 74 (470)
.+...++|+.|+|++|.|... +...+...++|++|+|++|.|++. +...+...++|+.|+| ++|.|+..-
T Consensus 60 ~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g 139 (185)
T 1io0_A 60 ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV 139 (185)
T ss_dssp HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH
T ss_pred HHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHH
Confidence 345678999999999999742 334555668999999999999853 4567788899999999 889997421
Q ss_pred -----CCCCCCCCCccccccCCcc
Q 040392 75 -----PRGGPFRNFSVESFEGNEL 93 (470)
Q Consensus 75 -----~~~~~l~~l~~l~~~~n~~ 93 (470)
..+...++|+.|++++|.+
T Consensus 140 ~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 140 EMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHhCCCcCEEeccCCCC
Confidence 1224457899999999887
No 417
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.52 E-value=0.00067 Score=64.68 Aligned_cols=139 Identities=12% Similarity=0.078 Sum_probs=74.7
Q ss_pred CeecccCceE-EEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCC--CcceeEEeeeccCCeeeEEEecCCCCC
Q 040392 179 NLIGRGGFGS-VYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRH--RNLIKVISTCSNEEFKALVLEYMPHGS 255 (470)
Q Consensus 179 ~~ig~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~~~~~~~~~~~~~lv~e~~~~g~ 255 (470)
+.|+.|.... +|+....+|..+++|...... ...+..|+.+++.+.. -.+.+++.+....+ +++||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4565555544 677766447788888654321 1344567777776642 23566776644433 68999997766
Q ss_pred hHHhhhcCC-------------------------CCCCHHHHH-------H-H------------HHHHHHHHHHHh---
Q 040392 256 LEKYMYSSN-------------------------YILDIFQRL-------N-I------------MIDVASALEYLH--- 287 (470)
Q Consensus 256 L~~~l~~~~-------------------------~~~~~~~~~-------~-i------------~~~i~~~L~~LH--- 287 (470)
+.+++.... ...+..... . + ...+...+..+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654432110 011111100 0 0 001111222221
Q ss_pred cCCCCCeeecCCCCCCeeeCCC----CCeEEeeeccccc
Q 040392 288 FGYSAPIIHCDLKPSNVLLDDN----MVAHLSDFSIAKL 322 (470)
Q Consensus 288 ~~~~~~i~H~dlkp~Nill~~~----~~~kl~Dfg~a~~ 322 (470)
......++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1124679999999999999875 6899999998764
No 418
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.50 E-value=0.00045 Score=68.85 Aligned_cols=74 Identities=14% Similarity=0.162 Sum_probs=49.5
Q ss_pred CCeecccCceEEEEEEeCC-CcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcc-eeEEeeeccCCeeeEEEecCCCCC
Q 040392 178 NNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL-IKVISTCSNEEFKALVLEYMPHGS 255 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~~~~~~~~~~~~~lv~e~~~~g~ 255 (470)
.+.|+.|-...+|++...+ +..+++|+...... ..-....|..+++.|...++ .++++.+.. .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 3578889999999998765 57899998754322 22223579999998864444 567777642 35999998754
Q ss_pred h
Q 040392 256 L 256 (470)
Q Consensus 256 L 256 (470)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 419
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.49 E-value=0.00072 Score=59.22 Aligned_cols=102 Identities=13% Similarity=0.058 Sum_probs=69.3
Q ss_pred ChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcccccc
Q 040392 255 SLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQ 334 (470)
Q Consensus 255 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 334 (470)
+|.+.+...+.++++.+++.++.|.+.+|.-+-. .+.-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 7999999999999999999999999999887721 11111223457889999999988764 1110
Q ss_pred cccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCC
Q 040392 335 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKP 374 (470)
Q Consensus 335 ~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p 374 (470)
.....+.|||... ...+.+.-|||+|+++|..+--..|
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1122466888763 3456788999999999999985554
No 420
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.48 E-value=0.00028 Score=69.86 Aligned_cols=73 Identities=21% Similarity=0.254 Sum_probs=50.2
Q ss_pred CCeecccCceEEEEEEeCC--------CcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcc-eeEEeeeccCCeeeEEE
Q 040392 178 NNLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL-IKVISTCSNEEFKALVL 248 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~~~~~~~~~~~~~lv~ 248 (470)
.+.|+.|....+|++...+ +..+++|+..... ....+..|..+++.+...++ .++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3568889999999998753 5789999884321 11345578888888853333 567776653 3899
Q ss_pred ecCCCCCh
Q 040392 249 EYMPHGSL 256 (470)
Q Consensus 249 e~~~~g~L 256 (470)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986444
No 421
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.47 E-value=0.00029 Score=68.33 Aligned_cols=139 Identities=13% Similarity=0.153 Sum_probs=82.4
Q ss_pred CCeecccCceEEEEEEeC--------CCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CCcceeEEeeeccCCeeeEEE
Q 040392 178 NNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRNLIKVISTCSNEEFKALVL 248 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~lv~ 248 (470)
.+.|..|-...+|++... ++..+++|+.... ........+|.++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 356777888999999875 2578999986432 223445668999988874 2223667777654 2899
Q ss_pred ecCCCCChHHh-----------------hhcCC----CCCC--HHHHHHHHHHHHH-------------------HHHH-
Q 040392 249 EYMPHGSLEKY-----------------MYSSN----YILD--IFQRLNIMIDVAS-------------------ALEY- 285 (470)
Q Consensus 249 e~~~~g~L~~~-----------------l~~~~----~~~~--~~~~~~i~~~i~~-------------------~L~~- 285 (470)
||++|.+|..- ++... .... +.+..++..++.. .+.+
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998655311 01111 1112 2344444433321 1222
Q ss_pred ---Hhc-CCCCCeeecCCCCCCeeeCCC----CCeEEeeecccc
Q 040392 286 ---LHF-GYSAPIIHCDLKPSNVLLDDN----MVAHLSDFSIAK 321 (470)
Q Consensus 286 ---LH~-~~~~~i~H~dlkp~Nill~~~----~~~kl~Dfg~a~ 321 (470)
|.. .....++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 221 123469999999999999876 789999998875
No 422
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.37 E-value=0.0011 Score=62.91 Aligned_cols=156 Identities=13% Similarity=0.097 Sum_probs=87.0
Q ss_pred ccCHHHHHHhhCCCCC-----CCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCC--cceeE
Q 040392 162 TFSHLELCRATDGFSE-----NNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHR--NLIKV 234 (470)
Q Consensus 162 ~~~~~~~~~~~~~~~~-----~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~~ 234 (470)
..+...+......|.. ...++ |....||++...+|+.+++|...... .....+..|..+++.+... .++++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~ 87 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAP 87 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecce
Confidence 3444444444443432 34566 88889999987778889999986331 1234566688887777422 23444
Q ss_pred Eee-----eccCCeeeEEEecCCCCChH-----Hh---------hhc----C----CCCCCHHHH---------------
Q 040392 235 IST-----CSNEEFKALVLEYMPHGSLE-----KY---------MYS----S----NYILDIFQR--------------- 272 (470)
Q Consensus 235 ~~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~----~----~~~~~~~~~--------------- 272 (470)
+.. ....+..+++|||++|.++. .+ ++. . ....++...
T Consensus 88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 167 (328)
T 1zyl_A 88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP 167 (328)
T ss_dssp CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence 443 11234567899999875432 11 110 0 011121110
Q ss_pred -------HHHHHHHHHHHHHHhc-CCCCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392 273 -------LNIMIDVASALEYLHF-GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321 (470)
Q Consensus 273 -------~~i~~~i~~~L~~LH~-~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 321 (470)
...+..++..+.-+-. .....++|||+++.||+++ + .+.++||+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 168 SGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 0111122222222211 1245689999999999999 4 89999998775
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.37 E-value=2.5e-05 Score=66.74 Aligned_cols=92 Identities=12% Similarity=0.031 Sum_probs=67.0
Q ss_pred CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCc-CCCCCcccccCC----CCCCceecCCcc-ccc-cC
Q 040392 2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNN-LSGAIPASLEKL----SYLENLNLSFNK-LEG-EI 74 (470)
Q Consensus 2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~-i~~~~~~~~~~l----~~L~~l~l~~N~-l~~-~~ 74 (470)
+|.....-.+|+.|||+++.++..--..+.++++|+.|+|++|. |++.-=..+..+ ++|+.|+|+++. |+. -+
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl 132 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI 132 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH
Confidence 45443333479999999999886544667899999999999996 774333445554 479999999975 763 22
Q ss_pred CCCCCCCCCccccccCCcc
Q 040392 75 PRGGPFRNFSVESFEGNEL 93 (470)
Q Consensus 75 ~~~~~l~~l~~l~~~~n~~ 93 (470)
..+..+++|+.|++++.+-
T Consensus 133 ~~L~~~~~L~~L~L~~c~~ 151 (176)
T 3e4g_A 133 IALHHFRNLKYLFLSDLPG 151 (176)
T ss_dssp HHGGGCTTCCEEEEESCTT
T ss_pred HHHhcCCCCCEEECCCCCC
Confidence 3345689999999987653
No 424
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.26 E-value=0.00059 Score=66.14 Aligned_cols=73 Identities=15% Similarity=0.217 Sum_probs=45.6
Q ss_pred CeecccCceEEEEEEeCC---------CcEEEEEEeecccchhhhhHHHHHHHHhcCCCCc-ceeEEeeeccCCeeeEEE
Q 040392 179 NLIGRGGFGSVYKARLGD---------GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN-LIKVISTCSNEEFKALVL 248 (470)
Q Consensus 179 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~~~~~~~~~~~~~lv~ 248 (470)
+.|+.|....+|+....+ +..+++|+...... .......|.++++.+...+ +.++++... .++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 567888889999998754 26899998754322 2223467888888875333 446665542 26899
Q ss_pred ecCCCCCh
Q 040392 249 EYMPHGSL 256 (470)
Q Consensus 249 e~~~~g~L 256 (470)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.25 E-value=0.00051 Score=55.74 Aligned_cols=57 Identities=26% Similarity=0.360 Sum_probs=41.6
Q ss_pred cEeeCcCCcCC-CCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCcccc
Q 040392 13 EYLFLGYNRLQ-GPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLE 71 (470)
Q Consensus 13 ~~l~l~~n~l~-~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~ 71 (470)
..++.+++.|+ ..+|..+ ..+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 46788888886 3445443 246888899999988555566778888888888888764
No 426
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.21 E-value=2.3e-05 Score=81.11 Aligned_cols=83 Identities=8% Similarity=0.006 Sum_probs=60.0
Q ss_pred CCCCCcEeeCcCCcCCCC----CCccccCCCCCCEEeccCCcCC----CCCcccccCCCCCCceecCCccccccCCCCCC
Q 040392 8 GLKNLEYLFLGYNRLQGP----IPDSFGDLISLKFLNLSNNNLS----GAIPASLEKLSYLENLNLSFNKLEGEIPRGGP 79 (470)
Q Consensus 8 ~l~~l~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~n~i~----~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~ 79 (470)
++++|+.|+|++|.+++. ++..+.++++|+.|+|++|.++ +.++..+..+++|+.|++++|.+.+.+..+..
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~ 241 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKA 241 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhh
Confidence 678888888888887755 3344566788888888888887 23445566788888888888888765544456
Q ss_pred CCCCccccccC
Q 040392 80 FRNFSVESFEG 90 (470)
Q Consensus 80 l~~l~~l~~~~ 90 (470)
+++|+.+++.+
T Consensus 242 ~~~L~~L~l~~ 252 (592)
T 3ogk_B 242 AANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEEECB
T ss_pred hhHHHhhcccc
Confidence 67777777654
No 427
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.11 E-value=2.7e-05 Score=80.67 Aligned_cols=60 Identities=7% Similarity=-0.009 Sum_probs=25.4
Q ss_pred CCCCCEEeccCCcCCCCCcccc-cCCCCCCceecCCccccccCC--CCCCCCCCccccccCCc
Q 040392 33 LISLKFLNLSNNNLSGAIPASL-EKLSYLENLNLSFNKLEGEIP--RGGPFRNFSVESFEGNE 92 (470)
Q Consensus 33 l~~L~~l~l~~n~i~~~~~~~~-~~l~~L~~l~l~~N~l~~~~~--~~~~l~~l~~l~~~~n~ 92 (470)
+++|+.|+|++|.+++.....+ ..+++|+.|++++|.+++... ....+++|+.|++++|+
T Consensus 455 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 455 AKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp CTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred chhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 4445555555554443222222 334555555555555432111 11234445555554444
No 428
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.04 E-value=0.0026 Score=60.79 Aligned_cols=67 Identities=12% Similarity=0.134 Sum_probs=43.4
Q ss_pred ccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCC---CCcceeEEee------eccCCeeeEEEecCCC
Q 040392 183 RGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR---HRNLIKVIST------CSNEEFKALVLEYMPH 253 (470)
Q Consensus 183 ~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~~~~~------~~~~~~~~lv~e~~~~ 253 (470)
.|....||+....+| .+++|+...... ..|..+++.|. -|.+++++.. ....+..+++|+|++|
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 334689999987777 999998764321 34666666553 2224555433 2234677899999998
Q ss_pred CCh
Q 040392 254 GSL 256 (470)
Q Consensus 254 g~L 256 (470)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 755
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.94 E-value=0.001 Score=53.90 Aligned_cols=57 Identities=16% Similarity=0.275 Sum_probs=46.4
Q ss_pred CEEeccCCcCC-CCCcccccCCCCCCceecCCccccccCCCC-CCCCCCccccccCCcccc
Q 040392 37 KFLNLSNNNLS-GAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFSVESFEGNELLC 95 (470)
Q Consensus 37 ~~l~l~~n~i~-~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~~~~n~~~~ 95 (470)
..++-+++.++ ..+|..+. .+|+.|+|++|+|+..++.. ..+++|+.|++.+|++.|
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 47899999997 35664332 47999999999999777765 568899999999999988
No 430
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.85 E-value=0.0041 Score=60.54 Aligned_cols=140 Identities=15% Similarity=0.152 Sum_probs=82.4
Q ss_pred CCeecccCceEEEEEEeCC--------CcEEEEEEeecccch---------hh---------hhHHHHHHHHhcCC-CCc
Q 040392 178 NNLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCGR---------AL---------KGFDVECEMMKSIR-HRN 230 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~---------~~---------~~~~~E~~~l~~l~-h~n 230 (470)
.+.|..|-...+|++..++ +..|.+++....... .. +....|..+++.+. +--
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3567778889999998754 368999987543221 11 12234888888775 333
Q ss_pred ceeEEeeeccCCeeeEEEecCCCCChHH--h---------------hhcCC----CCCC--HHHHHHHHHHHH-------
Q 040392 231 LIKVISTCSNEEFKALVLEYMPHGSLEK--Y---------------MYSSN----YILD--IFQRLNIMIDVA------- 280 (470)
Q Consensus 231 Iv~~~~~~~~~~~~~lv~e~~~~g~L~~--~---------------l~~~~----~~~~--~~~~~~i~~~i~------- 280 (470)
..++++++.+. +|+||++|-+|.. + ++... .... +....++..++.
T Consensus 137 ~Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 46777776542 8999999755421 1 01111 1122 122333332221
Q ss_pred ---------------HHH----HHHhc-CCCCCeeecCCCCCCeeeCCC------CCeEEeeecccc
Q 040392 281 ---------------SAL----EYLHF-GYSAPIIHCDLKPSNVLLDDN------MVAHLSDFSIAK 321 (470)
Q Consensus 281 ---------------~~L----~~LH~-~~~~~i~H~dlkp~Nill~~~------~~~kl~Dfg~a~ 321 (470)
.-+ .+|.. .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22321 123568999999999999877 789999998775
No 431
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.80 E-value=0.00019 Score=74.27 Aligned_cols=85 Identities=14% Similarity=0.107 Sum_probs=56.9
Q ss_pred CCCCCcEeeCcCCcCCCCCCcccc-CCCCCCEEeccCC-cCCCC-CcccccCCCCCCceecCCccccccCC----C-CCC
Q 040392 8 GLKNLEYLFLGYNRLQGPIPDSFG-DLISLKFLNLSNN-NLSGA-IPASLEKLSYLENLNLSFNKLEGEIP----R-GGP 79 (470)
Q Consensus 8 ~l~~l~~l~l~~n~l~~~~p~~~~-~l~~L~~l~l~~n-~i~~~-~~~~~~~l~~L~~l~l~~N~l~~~~~----~-~~~ 79 (470)
.+++|+.|+|++|.+++..+..+. .+++|+.|+|++| .+++. ++..+..+++|+.|++++|.+++..+ . ...
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~ 182 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDT 182 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTT
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhc
Confidence 467788888888887765555554 5778888888887 45532 44444578888888888887664322 1 135
Q ss_pred CCCCccccccCCc
Q 040392 80 FRNFSVESFEGNE 92 (470)
Q Consensus 80 l~~l~~l~~~~n~ 92 (470)
+++|+.|++++|.
T Consensus 183 ~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 183 YTSLVSLNISCLA 195 (594)
T ss_dssp CCCCCEEECTTCC
T ss_pred CCcCcEEEecccC
Confidence 6677777777764
No 432
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.79 E-value=0.0002 Score=69.18 Aligned_cols=15 Identities=27% Similarity=0.091 Sum_probs=7.5
Q ss_pred CCCCcEeeCcCCcCC
Q 040392 9 LKNLEYLFLGYNRLQ 23 (470)
Q Consensus 9 l~~l~~l~l~~n~l~ 23 (470)
+++|+.|+|..|.++
T Consensus 192 ~~~L~~L~L~~~~l~ 206 (362)
T 2ra8_A 192 RPNLKSLEIISGGLP 206 (362)
T ss_dssp CTTCSEEEEECSBCC
T ss_pred CCCCcEEEEecCCCC
Confidence 345555555555443
No 433
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.70 E-value=0.002 Score=63.08 Aligned_cols=87 Identities=9% Similarity=-0.084 Sum_probs=61.2
Q ss_pred cccCCCCCCcEeeCcCCcCC-----CCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-C
Q 040392 4 TEIGGLKNLEYLFLGYNRLQ-----GPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-G 77 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~n~l~-----~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~ 77 (470)
..|.++++|+.+++.+|.+. ...+..|.++++|+.++|.+ .++..-...|..|++|+.|++..| ++..... .
T Consensus 265 ~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF 342 (401)
T 4fdw_A 265 RAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAF 342 (401)
T ss_dssp TTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSS
T ss_pred hHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhC
Confidence 45677888888888887764 24456678888888888884 466455677888888888888665 5433333 2
Q ss_pred CCCCCCccccccCCcc
Q 040392 78 GPFRNFSVESFEGNEL 93 (470)
Q Consensus 78 ~~l~~l~~l~~~~n~~ 93 (470)
..+ +|+.+++.+|..
T Consensus 343 ~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 343 NNT-GIKEVKVEGTTP 357 (401)
T ss_dssp SSS-CCCEEEECCSSC
T ss_pred CCC-CCCEEEEcCCCC
Confidence 455 888888888765
No 434
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.55 E-value=0.00052 Score=70.85 Aligned_cols=61 Identities=11% Similarity=0.018 Sum_probs=47.3
Q ss_pred cCCCCCCcEeeCcCCcCCCC----CCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCC
Q 040392 6 IGGLKNLEYLFLGYNRLQGP----IPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSF 67 (470)
Q Consensus 6 ~~~l~~l~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~ 67 (470)
+.++++|+.|+|++|.+++. ++..+.++++|+.|+|++|.+.+ +|..+..+++|+.|++++
T Consensus 188 ~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 188 AQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp HHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred HhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 34678999999999998733 33445678999999999998884 667777788888888874
No 435
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.49 E-value=0.007 Score=59.50 Aligned_cols=74 Identities=11% Similarity=0.196 Sum_probs=50.0
Q ss_pred CCeecccCceEEEEEEeCC--------CcEEEEEEeecccchhhhhHHHHHHHHhcCCCCc-ceeEEeeeccCCeeeEEE
Q 040392 178 NNLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN-LIKVISTCSNEEFKALVL 248 (470)
Q Consensus 178 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~~~~~~~~~~~~~lv~ 248 (470)
.+.+..|-...+|+....+ +..+++|+..... ...-...+|.++++.+.-.+ ..++++.+. .++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567788889999998753 5789999875432 22334567888888875222 355665443 26899
Q ss_pred ecCCCCCh
Q 040392 249 EYMPHGSL 256 (470)
Q Consensus 249 e~~~~g~L 256 (470)
||++|.+|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998654
No 436
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.44 E-value=0.00026 Score=68.34 Aligned_cols=86 Identities=21% Similarity=0.240 Sum_probs=61.4
Q ss_pred CCCCCcEeeCcC--CcCCCC-----CCccc--cCCCCCCEEeccCCcCCCCCccccc---CCCCCCceecCCcccccc--
Q 040392 8 GLKNLEYLFLGY--NRLQGP-----IPDSF--GDLISLKFLNLSNNNLSGAIPASLE---KLSYLENLNLSFNKLEGE-- 73 (470)
Q Consensus 8 ~l~~l~~l~l~~--n~l~~~-----~p~~~--~~l~~L~~l~l~~n~i~~~~~~~~~---~l~~L~~l~l~~N~l~~~-- 73 (470)
.+++|+.|+|+. |...+- +...+ ..+++|+.|+|.+|.+++..+..+. .+++|+.|+|+.|.|++.
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 689999999853 322211 11122 2478999999999999854443333 588999999999999852
Q ss_pred ---CCCCCCCCCCccccccCCcc
Q 040392 74 ---IPRGGPFRNFSVESFEGNEL 93 (470)
Q Consensus 74 ---~~~~~~l~~l~~l~~~~n~~ 93 (470)
...+..+++|+.|++++|.+
T Consensus 297 ~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 297 RLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp HHHHTTHHHHTTCSEEECCSBBC
T ss_pred HHHHhhcccCCcceEEECCCCcC
Confidence 22335678999999999986
No 437
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.36 E-value=0.0053 Score=60.09 Aligned_cols=78 Identities=14% Similarity=0.104 Sum_probs=40.3
Q ss_pred CCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCCcccccc
Q 040392 11 NLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNFSVESFE 89 (470)
Q Consensus 11 ~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l~~l~~~ 89 (470)
+|+.+.|.+ .++.+-+..|.++.+|+.++|++|+++......|. +.+|+.+.+..| ++...... ..+.+|+.+.+.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 466666664 44434445566666666666666666622223333 456666666543 43222222 345555555554
Q ss_pred CC
Q 040392 90 GN 91 (470)
Q Consensus 90 ~n 91 (470)
.|
T Consensus 235 ~~ 236 (401)
T 4fdw_A 235 EN 236 (401)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 438
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.54 E-value=0.013 Score=57.11 Aligned_cols=86 Identities=12% Similarity=0.155 Sum_probs=62.5
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l 83 (470)
.|.++++|+.+.+. +.++.+....|.++.+|+.++|..| ++..-..+|..|.+|+.+.+..+ ++..-.. ...+.+|
T Consensus 283 aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L 359 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTAL 359 (394)
T ss_dssp TTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTC
T ss_pred ccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCC
Confidence 46678889999986 4455354567888999999999765 55455678889999999998765 5522222 3567888
Q ss_pred ccccccCCcc
Q 040392 84 SVESFEGNEL 93 (470)
Q Consensus 84 ~~l~~~~n~~ 93 (470)
+.+++.+|..
T Consensus 360 ~~i~~~~~~~ 369 (394)
T 4gt6_A 360 NNIEYSGSRS 369 (394)
T ss_dssp CEEEESSCHH
T ss_pred CEEEECCcee
Confidence 8888888764
No 439
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.38 E-value=0.018 Score=56.25 Aligned_cols=29 Identities=28% Similarity=0.406 Sum_probs=24.9
Q ss_pred CeeecCCCCCCeee------CCCCCeEEeeecccc
Q 040392 293 PIIHCDLKPSNVLL------DDNMVAHLSDFSIAK 321 (470)
Q Consensus 293 ~i~H~dlkp~Nill------~~~~~~kl~Dfg~a~ 321 (470)
.++|+|+.+.||++ +++..+.++||.+|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 36799999999999 456789999998875
No 440
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.35 E-value=0.002 Score=54.92 Aligned_cols=67 Identities=16% Similarity=0.163 Sum_probs=51.0
Q ss_pred ccCCCCCCcEeeCcCCc-CCCCCCccccCC----CCCCEEeccCCc-CCCCCcccccCCCCCCceecCCcc-cc
Q 040392 5 EIGGLKNLEYLFLGYNR-LQGPIPDSFGDL----ISLKFLNLSNNN-LSGAIPASLEKLSYLENLNLSFNK-LE 71 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~-l~~~~p~~~~~l----~~L~~l~l~~n~-i~~~~~~~~~~l~~L~~l~l~~N~-l~ 71 (470)
.+.++++|+.|+|+++. |++.--..+..+ ++|+.|+|++|. ||+.-=..+..+++|+.|+++++. ++
T Consensus 80 ~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 80 HMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp GGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCTTCC
T ss_pred HhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCCCCC
Confidence 35789999999999995 764322345554 379999999985 885444567889999999999875 44
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.19 E-value=0.0041 Score=53.98 Aligned_cols=84 Identities=14% Similarity=0.112 Sum_probs=60.9
Q ss_pred CCCCCcEeeCcCC-cCCCC----CCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceecCCccccccC----
Q 040392 8 GLKNLEYLFLGYN-RLQGP----IPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNLSFNKLEGEI---- 74 (470)
Q Consensus 8 ~l~~l~~l~l~~n-~l~~~----~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l~~N~l~~~~---- 74 (470)
+-++|+.|+|++| +|... +-..+..-+.|+.|+|++|.|.+. +-+.+..-+.|+.|+|+.|.|+..-
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 4578999999986 77631 334566678899999999999743 3345567789999999999997321
Q ss_pred -CCCCCCCCCccccccCC
Q 040392 75 -PRGGPFRNFSVESFEGN 91 (470)
Q Consensus 75 -~~~~~l~~l~~l~~~~n 91 (470)
..+..-+.|+.|++++|
T Consensus 119 a~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHTTTTCCCSEEECCCC
T ss_pred HHHHhhCCceeEEECCCC
Confidence 12334456889998764
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=95.06 E-value=0.023 Score=55.31 Aligned_cols=83 Identities=16% Similarity=0.046 Sum_probs=50.9
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l 83 (470)
.|..+.+|+.+.+.++ ++.+-..+|.++.+|+.++|.++ ++..-..+|.+|.+|+.+++..| ++..... ...+.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 3456677777777654 44344456777777777777644 55344566777777777777766 4422222 2456677
Q ss_pred ccccccC
Q 040392 84 SVESFEG 90 (470)
Q Consensus 84 ~~l~~~~ 90 (470)
+.+++..
T Consensus 369 ~~i~lp~ 375 (394)
T 4fs7_A 369 KKVELPK 375 (394)
T ss_dssp CEEEEEG
T ss_pred CEEEECC
Confidence 7776644
No 443
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=94.82 E-value=0.038 Score=53.72 Aligned_cols=84 Identities=6% Similarity=0.027 Sum_probs=60.2
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCC
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNF 83 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l 83 (470)
.|.++..|+.+.+.++..+ .-...|.++.+|+.+.+. +.++..-...|..|.+|+.+++..| ++..-.. ...+.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 5667888999988877655 555678888999999986 4455455577888999999998765 4423232 3567788
Q ss_pred ccccccCC
Q 040392 84 SVESFEGN 91 (470)
Q Consensus 84 ~~l~~~~n 91 (470)
+.+.+..+
T Consensus 337 ~~i~ip~s 344 (394)
T 4gt6_A 337 ERIAIPSS 344 (394)
T ss_dssp CEEEECTT
T ss_pred CEEEECcc
Confidence 88887544
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.64 E-value=0.056 Score=52.11 Aligned_cols=39 Identities=13% Similarity=0.112 Sum_probs=19.7
Q ss_pred cccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCC
Q 040392 29 SFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSF 67 (470)
Q Consensus 29 ~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~ 67 (470)
.|.++.+|+.+.+.++.++..-...|.+|.+|+.+++..
T Consensus 281 aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 281 LCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp TTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCT
T ss_pred ccccccccccccccccccceehhhhhcCCCCCCEEEcCc
Confidence 344455555555555555433334455555555555543
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.62 E-value=0.051 Score=52.81 Aligned_cols=63 Identities=17% Similarity=0.125 Sum_probs=52.7
Q ss_pred cccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCc
Q 040392 4 TEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFN 68 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N 68 (470)
..|.++++|+.++|.++ ++.+-..+|.++.+|+.++|..| ++..-..+|..|.+|+.+++..|
T Consensus 314 ~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 314 EAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred hhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 35778999999999865 66455678999999999999887 76466678999999999999766
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=93.30 E-value=0.077 Score=51.09 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=54.1
Q ss_pred ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCcccc
Q 040392 5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLE 71 (470)
Q Consensus 5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~ 71 (470)
.|.++++|+.+.+.++.++.+-...|.++.+|+.+.|.++ ++..-..+|.+|.+|+.+.+..| ++
T Consensus 281 aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~ 345 (379)
T 4h09_A 281 LCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT 345 (379)
T ss_dssp TTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC
T ss_pred ccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC
Confidence 5678899999999999988565678999999999999866 66455678999999999999765 44
No 447
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=91.73 E-value=0.057 Score=46.73 Aligned_cols=63 Identities=16% Similarity=0.154 Sum_probs=47.5
Q ss_pred CCCCCCcEeeCcCCcCCCC----CCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceecCCcc
Q 040392 7 GGLKNLEYLFLGYNRLQGP----IPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNLSFNK 69 (470)
Q Consensus 7 ~~l~~l~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l~~N~ 69 (470)
..-++|+.|+|++|+|... +-..+..-+.|+.|+|++|.|++. +-+.+..-+.|+.|+|++|.
T Consensus 67 ~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 67 CNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp TTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred hhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCc
Confidence 3457899999999999732 333444568899999999999843 22456667889999999763
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.69 E-value=0.54 Score=29.40 Aligned_cols=7 Identities=29% Similarity=0.121 Sum_probs=2.7
Q ss_pred hHHHHHH
Q 040392 122 IVLPLSA 128 (470)
Q Consensus 122 ~~~~~~~ 128 (470)
++.++++
T Consensus 17 VVgGv~~ 23 (44)
T 2ks1_B 17 MVGALLL 23 (44)
T ss_dssp HHHHHHH
T ss_pred hhHHHHH
Confidence 3333443
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=89.46 E-value=0.51 Score=29.42 Aligned_cols=12 Identities=25% Similarity=0.476 Sum_probs=5.2
Q ss_pred HHHHHHhhhccC
Q 040392 134 VILLILRYRQKG 145 (470)
Q Consensus 134 ~~~~~~~~~~~~ 145 (470)
++++++|+|+..
T Consensus 30 ~~~~~~RRR~~~ 41 (44)
T 2jwa_A 30 VFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHCSC
T ss_pred HHHhheehhhhh
Confidence 334444444433
No 450
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.89 E-value=1.3 Score=38.57 Aligned_cols=122 Identities=9% Similarity=0.142 Sum_probs=79.8
Q ss_pred CCCcceeEEeeeccCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 040392 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL 306 (470)
Q Consensus 227 ~h~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill 306 (470)
.||+++.. .+-.+.+...+.++.-+ +...+-.- ...+...+++++..|+....+++ . -+|--++|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~i--k~~~~~eKlr~l~ni~~l~~~~~---~--r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNI--KSFTKNEKLRYLLNIKNLEEVNR---T--RYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGG--GGSCHHHHHHHHHHGGGGGGGGG---S--SEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHH--HhcCHHHHHHHHHHHHHHHHHhc---C--ceEEEEecceEEE
Confidence 58888865 45555565545444433 33222211 24678899999999999886666 2 3688899999999
Q ss_pred CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCc
Q 040392 307 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE 382 (470)
Q Consensus 307 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~ 382 (470)
+.++.+++.-.|+...+. |. ..+...=.-.+=+++..+++++..|+...++.
T Consensus 113 ~~~~~p~i~~RGik~~l~-------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G~ 164 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVVD-------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEGN 164 (215)
T ss_dssp CTTSCEEESCCEETTTBS-------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHSC
T ss_pred cCCCCEEEEEccCccCCC-------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcCh
Confidence 999999999887654332 11 11111123346678888999999888755543
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=85.09 E-value=2 Score=26.72 Aligned_cols=6 Identities=17% Similarity=0.473 Sum_probs=2.4
Q ss_pred HHHhhh
Q 040392 137 LILRYR 142 (470)
Q Consensus 137 ~~~~~~ 142 (470)
+++|+|
T Consensus 32 ~~~RRR 37 (44)
T 2l2t_A 32 VYVRRK 37 (44)
T ss_dssp HHHHTT
T ss_pred HHhhhh
Confidence 334433
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=83.38 E-value=0.12 Score=51.48 Aligned_cols=61 Identities=8% Similarity=0.046 Sum_probs=17.8
Q ss_pred CCCCeecccCceEEEEEEeCC-CcEEEE------EEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeec
Q 040392 176 SENNLIGRGGFGSVYKARLGD-GMEVAV------KVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCS 239 (470)
Q Consensus 176 ~~~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~ 239 (470)
.+.+.|| ||.||+|.+.. ..+||+ |..... ..+....+..|..+++.++|||+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 3445666 99999998754 467888 665432 1233456778899999999999999887653
No 453
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.53 E-value=6.1 Score=34.45 Aligned_cols=115 Identities=10% Similarity=0.094 Sum_probs=74.6
Q ss_pred CCCcceeEEeeeccCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCeeecCCCCCCee
Q 040392 227 RHRNLIKVISTCSNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALE-YLHFGYSAPIIHCDLKPSNVL 305 (470)
Q Consensus 227 ~h~nIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~-~LH~~~~~~i~H~dlkp~Nil 305 (470)
.||++ -...-.+++...+.++.-+++.=...+. ..+...+++++..++.... +++ .-+|--++|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 57777 3333355666666666543332222332 4678899999999888766 555 3467889999999
Q ss_pred eCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccch-hhHHHHHHHHHhCCCCCCc
Q 040392 306 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDV-YSFGIMLMETFTGKKPTNE 377 (470)
Q Consensus 306 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv-wslGv~l~el~tg~~p~~~ 377 (470)
++.++.+++.-.|+-..+ +|.-+ + ..|. -.+=+++..++.++..|++
T Consensus 117 f~~~~~p~i~hRGi~~~l-------------------pP~e~-----~-ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL-------------------PPDEW-----D-DERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ECTTCCEEESCCEETTTB-------------------SSCSC-----C-HHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EeCCCcEEEEEcCCcccC-------------------CCCCC-----C-HHHHHHHHHHHHHHHHcCCCCHHH
Confidence 999999999988865433 22211 1 1222 2466778888888887765
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=63.84 E-value=12 Score=22.51 Aligned_cols=10 Identities=10% Similarity=0.325 Sum_probs=4.2
Q ss_pred hhhhhHHHHH
Q 040392 118 LLLRIVLPLS 127 (470)
Q Consensus 118 ~~~~~~~~~~ 127 (470)
.+..+++++.
T Consensus 12 aIAGiVvG~v 21 (38)
T 2k1k_A 12 EIVAVIFGLL 21 (38)
T ss_dssp HHHHHHHHHH
T ss_pred ceeeeehHHH
Confidence 3444444443
No 455
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=61.37 E-value=58 Score=33.06 Aligned_cols=46 Identities=17% Similarity=0.108 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHH--HHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392 269 IFQRLNIMIDVA--SALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321 (470)
Q Consensus 269 ~~~~~~i~~~i~--~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 321 (470)
+..+..++..+| ..+.|+= .. +|=+++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL---Gi----gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL---GV----GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---TC----CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee---ec----cCCCCcceeEcCCCCEeeeehHHhh
Confidence 344555555544 3456665 33 4778999999999999999999874
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=58.98 E-value=13 Score=27.75 Aligned_cols=47 Identities=15% Similarity=0.111 Sum_probs=30.5
Q ss_pred cCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCc
Q 040392 21 RLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFN 68 (470)
Q Consensus 21 ~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N 68 (470)
.++.+-...|.++.+|+.+.|..+ ++..-...|..|.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 445444456777777777777765 33245566777777777777654
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=49.05 E-value=36 Score=31.60 Aligned_cols=135 Identities=17% Similarity=0.120 Sum_probs=68.0
Q ss_pred CeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEee---------------------
Q 040392 179 NLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVIST--------------------- 237 (470)
Q Consensus 179 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~--------------------- 237 (470)
+....|.. .||.+.. ++..++||... ....+.+-.++...=.+..|+..-+.-.
T Consensus 75 ~~s~~Gst-gvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 75 ERSEKGTE-GLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp EECCSTTS-CEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred EeccCCCC-CeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 34455554 5555544 58899999441 2233333344444444566664322211
Q ss_pred -eccCCeeeEEEecCCCCChHHhhhcC-CCCCCHHHHHHHHHHHH--HHHHHH-hcCCCCCeee-cCCCCCCeeeCCCCC
Q 040392 238 -CSNEEFKALVLEYMPHGSLEKYMYSS-NYILDIFQRLNIMIDVA--SALEYL-HFGYSAPIIH-CDLKPSNVLLDDNMV 311 (470)
Q Consensus 238 -~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~--~~L~~L-H~~~~~~i~H-~dlkp~Nill~~~~~ 311 (470)
........++|||.+|..|.+.-... ...+.. +.+.++. -++.++ ++....+.+. .--.++|||+++++.
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred HHhhcccceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 00112456999999876654332110 001222 2233322 234444 4333333322 235789999976554
Q ss_pred -eEEeeeccccc
Q 040392 312 -AHLSDFSIAKL 322 (470)
Q Consensus 312 -~kl~Dfg~a~~ 322 (470)
+.++|-+.+..
T Consensus 226 ~~~~IDhn~af~ 237 (342)
T 1cja_A 226 TVVPIDSKIIPL 237 (342)
T ss_dssp CEEECSCCCCCC
T ss_pred eEEEEcCCcccc
Confidence 88889888753
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=45.53 E-value=35 Score=25.32 Aligned_cols=41 Identities=15% Similarity=0.084 Sum_probs=33.6
Q ss_pred cccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCc
Q 040392 4 TEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNN 45 (470)
Q Consensus 4 ~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~ 45 (470)
..|.++.+|+.+.+..+= +.+-..+|.++.+|+.+.|....
T Consensus 14 ~aF~~c~~L~~i~iP~~v-~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPNI-GLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CTTTTCTTCCCEEECTTS-SCCCTTSSTTCTTCCCEEECCSC
T ss_pred HHhcCCCCCcEEEcCCch-heEcHHHHhccCCccEEEEcCCC
Confidence 467899999999999874 43656789999999999997654
No 459
>4b19_A PEPA1; toxin, toxin apoptotic peptide, apoptosis; NMR {Staphylococcus aureus}
Probab=37.27 E-value=27 Score=19.54 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=15.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcc
Q 040392 120 LRIVLPLSAIFMIVVILLILRYRQK 144 (470)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (470)
+.++.++....++..+-.|++.|.+
T Consensus 5 v~iia~visGcivalF~hWL~~r~~ 29 (30)
T 4b19_A 5 VHIIAPVISGCAIAFFSYWLSRRNT 29 (30)
T ss_dssp TSSTTTTHHHHHHHHHHHHHHHHSC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhccC
Confidence 4455566666666667777776643
No 460
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=27.49 E-value=32 Score=35.50 Aligned_cols=44 Identities=23% Similarity=0.185 Sum_probs=31.7
Q ss_pred HHHHHHHHHH--HHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392 271 QRLNIMIDVA--SALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK 321 (470)
Q Consensus 271 ~~~~i~~~i~--~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~ 321 (470)
.+..++.++| ..+.|+= .. +|=+++|||++.+|++.-+|||.+-
T Consensus 530 ar~nF~~SlA~~Svv~YIL---Gl----GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYLL---GV----GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHH---TC----CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHc---cC----CCCCCcceEEeCCCCEEEEeehhhh
Confidence 3444555443 3455555 22 5889999999999999999999874
No 461
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=25.70 E-value=1.6e+02 Score=19.92 Aligned_cols=7 Identities=57% Similarity=0.325 Sum_probs=2.8
Q ss_pred hHHHHHH
Q 040392 122 IVLPLSA 128 (470)
Q Consensus 122 ~~~~~~~ 128 (470)
++++.++
T Consensus 12 ivlGg~~ 18 (70)
T 2klu_A 12 IVLGGVA 18 (70)
T ss_dssp HHHHHHH
T ss_pred HHHhHHH
Confidence 3444433
No 462
>3a1g_A RNA-directed RNA polymerase catalytic subunit; influenza virus, RNA polymerase, nucleotide-binding, nucleotidyltransferase, nucleus, RNA replication; 1.70A {Influenza a virus} PDB: 2ztt_A
Probab=21.57 E-value=2e+02 Score=19.83 Aligned_cols=46 Identities=20% Similarity=0.094 Sum_probs=35.8
Q ss_pred hhhhHHHHHHHHhhccCCCccCCC----CHHHHHHHHHHHHHHHhhhccC
Q 040392 416 KEQCVSCVFNLAMECTVESPEQRI----NAREIVAKLLKIRDSLLRNVGD 461 (470)
Q Consensus 416 ~~~~~~~l~~l~~~cl~~dP~~Rp----s~~el~~~L~~i~~~~~~~~~~ 461 (470)
++.+-+.+.+++..|+...--.|| ||-|...+--.+..++.+++|.
T Consensus 8 eEq~Yqk~cnlfe~~F~sasyr~PiG~~Sm~EAm~~rlr~dAr~d~esGr 57 (80)
T 3a1g_A 8 DEQMYQRCCNLFEKFFPSSSYRRPVGISSMVEAMVSRARIDARIDFESGR 57 (80)
T ss_dssp CCHHHHHHHHHHHHHSCSSCCSCCCTTSBHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHccccccCCCcchhhHHHHHHHHHHHHHhhhhhhcc
Confidence 345567788999999998887888 8888888777777777777654
Done!