Query         040392
Match_columns 470
No_of_seqs    362 out of 4047
Neff          9.6 
Searched_HMMs 13730
Date          Mon Mar 25 12:39:34 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040392.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/040392hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0   2E-55 1.5E-59  412.7  20.4  261  172-454     7-273 (276)
  2 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0   9E-55 6.6E-59  406.2  19.9  258  173-454     5-262 (263)
  3 d1nvra_ d.144.1.7 (A:) Cell cy 100.0 1.1E-54 7.8E-59  406.2  17.9  254  172-447     4-260 (271)
  4 d1yhwa1 d.144.1.7 (A:249-541)  100.0 1.8E-53 1.3E-57  402.2  22.2  250  173-447    20-270 (293)
  5 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 1.1E-53 8.1E-58  396.9  18.6  255  172-451     3-258 (258)
  6 d2jfla1 d.144.1.7 (A:21-308) S 100.0 1.6E-53 1.2E-57  402.0  17.7  252  173-447    12-269 (288)
  7 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 1.1E-53   8E-58  405.8  16.2  258  173-453    26-292 (299)
  8 d2j4za1 d.144.1.7 (A:126-388)  100.0   2E-53 1.4E-57  396.0  17.1  246  173-447     6-255 (263)
  9 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 4.4E-53 3.2E-57  396.6  18.5  258  172-454    12-270 (272)
 10 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 3.8E-53 2.8E-57  398.8  17.5  263  173-459     8-277 (285)
 11 d1opja_ d.144.1.7 (A:) Abelson 100.0 1.1E-52 7.9E-57  396.6  17.1  257  172-452    16-274 (287)
 12 d1mqba_ d.144.1.7 (A:) epha2 r 100.0 4.2E-52 3.1E-56  392.3  19.9  260  172-453     6-272 (283)
 13 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 4.8E-53 3.5E-57  398.5  13.3  250  173-447     8-261 (288)
 14 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 1.1E-52 7.8E-57  404.2  15.4  256  172-449    36-322 (325)
 15 d2java1 d.144.1.7 (A:3-271) Se 100.0 1.6E-52 1.2E-56  391.5  15.6  254  172-447     3-266 (269)
 16 d1t4ha_ d.144.1.7 (A:) Protein 100.0 1.3E-51 9.3E-56  385.3  21.1  245  176-447    12-266 (270)
 17 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 4.4E-52 3.2E-56  390.4  17.1  251  179-454    13-270 (277)
 18 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 2.5E-52 1.8E-56  401.1  13.8  268  172-447     5-298 (322)
 19 d1koaa2 d.144.1.7 (A:5915-6264 100.0 9.2E-52 6.7E-56  400.2  17.2  253  172-447    25-280 (350)
 20 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 7.6E-52 5.5E-56  394.1  15.2  252  172-447     8-264 (307)
 21 d1koba_ d.144.1.7 (A:) Twitchi 100.0 1.8E-51 1.3E-55  398.6  17.4  253  172-447    28-283 (352)
 22 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 2.6E-51 1.9E-55  385.1  15.8  258  172-454     6-269 (273)
 23 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 3.7E-51 2.7E-55  392.2  17.0  257  173-453     9-272 (317)
 24 d1jksa_ d.144.1.7 (A:) Death-a 100.0   1E-50 7.5E-55  384.9  19.8  252  172-447     9-271 (293)
 25 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 4.6E-51 3.3E-55  388.8  16.6  262  168-452     8-300 (301)
 26 d1fmka3 d.144.1.7 (A:249-533)  100.0 4.3E-51 3.2E-55  384.5  16.2  257  172-453    16-273 (285)
 27 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 4.4E-51 3.2E-55  388.9  15.9  245  174-447    16-267 (309)
 28 d1byga_ d.144.1.7 (A:) Carboxy 100.0 3.1E-51 2.3E-55  381.0  14.0  251  172-453     6-259 (262)
 29 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 5.6E-50   4E-54  382.1  20.5  259  178-458    32-298 (311)
 30 d1ywna1 d.144.1.7 (A:818-1166) 100.0   3E-50 2.2E-54  383.2  18.6  261  172-454    12-297 (299)
 31 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 3.2E-50 2.3E-54  387.1  18.9  249  172-447     4-261 (337)
 32 d1vjya_ d.144.1.7 (A:) Type I  100.0 4.6E-50 3.3E-54  381.7  18.6  275  173-454     3-298 (303)
 33 d1fota_ d.144.1.7 (A:) cAMP-de 100.0 7.1E-50 5.2E-54  382.0  18.6  245  173-447     4-257 (316)
 34 d1u46a_ d.144.1.7 (A:) Activat 100.0 1.3E-50 9.6E-55  379.5  13.0  256  173-451     8-272 (273)
 35 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 5.5E-50   4E-54  377.0  16.1  260  172-452     6-275 (277)
 36 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 1.5E-49 1.1E-53  380.0  19.0  262  172-454    22-308 (311)
 37 d1tkia_ d.144.1.7 (A:) Titin,  100.0 1.3E-49 9.6E-54  381.2  17.6  252  172-447     4-258 (321)
 38 d1phka_ d.144.1.7 (A:) gamma-s 100.0 1.4E-49   1E-53  372.9  17.0  251  173-447     3-270 (277)
 39 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 2.9E-49 2.1E-53  375.8  18.0  258  172-452    12-295 (299)
 40 d1omwa3 d.144.1.7 (A:186-549)  100.0 8.3E-49   6E-53  381.7  20.4  250  172-447     3-265 (364)
 41 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 3.4E-49 2.5E-53  377.1  17.2  256  173-454    10-286 (309)
 42 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0   7E-49 5.1E-53  380.2  18.6  245  173-447    41-294 (350)
 43 d2ozaa1 d.144.1.7 (A:51-385) M 100.0   1E-48 7.4E-53  377.0  18.6  252  172-447    10-272 (335)
 44 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 5.6E-49 4.1E-53  375.3  15.3  259  172-453    19-294 (308)
 45 d1xjda_ d.144.1.7 (A:) Protein 100.0 3.9E-49 2.8E-53  377.6  14.1  247  173-446     2-254 (320)
 46 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 1.9E-48 1.4E-52  370.2  18.4  269  173-447     2-283 (298)
 47 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 2.7E-48   2E-52  369.6  17.0  263  177-447     2-280 (299)
 48 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 3.5E-48 2.6E-52  366.5  17.4  269  173-447     2-281 (286)
 49 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 1.5E-47 1.1E-51  365.7  18.1  271  170-447     4-293 (305)
 50 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 2.7E-48   2E-52  364.2  10.2  241  172-447     3-255 (273)
 51 d1ckia_ d.144.1.7 (A:) Casein  100.0 2.3E-45 1.7E-49  349.3  21.5  262  172-454     6-279 (299)
 52 d1csna_ d.144.1.7 (A:) Casein  100.0 4.2E-45 3.1E-49  345.9  22.9  264  172-456     4-281 (293)
 53 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 1.7E-45 1.2E-49  349.3  19.2  269  173-447     2-283 (292)
 54 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 1.5E-45 1.1E-49  357.5  18.0  269  172-447     7-295 (345)
 55 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 3.7E-45 2.7E-49  351.1  20.1  271  172-447     9-305 (318)
 56 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 6.9E-45 5.1E-49  353.4  19.8  266  174-452    21-310 (350)
 57 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 2.8E-45   2E-49  351.2  15.7  253  173-447    24-292 (322)
 58 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 4.1E-45   3E-49  354.8  16.7  269  172-452    17-308 (346)
 59 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0 1.2E-44 8.7E-49  349.0  19.6  262  173-447    35-319 (328)
 60 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 1.6E-44 1.2E-48  351.4  17.5  261  173-447    17-311 (355)
 61 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 4.2E-44 3.1E-48  348.2  13.7  265  172-447    17-301 (348)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 3.5E-39 2.5E-43  315.1  12.9  267  173-447    13-328 (362)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.9 3.6E-24 2.6E-28  188.3   9.1  168  177-365     4-189 (191)
 64 d1ogqa_ c.10.2.8 (A:) Polygala  99.4 1.1E-13 8.1E-18  130.2   8.1  100    2-105   213-312 (313)
 65 d2ifga3 c.10.2.7 (A:36-191) Hi  99.4 5.5E-13   4E-17  111.6   8.8   94    2-95     23-117 (156)
 66 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.3   1E-12 7.4E-17  114.2   8.3   92    2-95     23-116 (192)
 67 d1dcea3 c.10.2.2 (A:444-567) R  99.3 2.5E-12 1.8E-16  103.0   8.7   88    5-95     15-104 (124)
 68 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.2   2E-11 1.4E-15  105.8   9.1   94    3-96     47-141 (192)
 69 d1dcea3 c.10.2.2 (A:444-567) R  99.2 2.1E-11 1.5E-15   97.5   7.0   79   13-95      1-79  (124)
 70 d1p9ag_ c.10.2.7 (G:) von Will  99.1 8.7E-11 6.4E-15  107.2  10.1   91    5-95    119-209 (266)
 71 d1ogqa_ c.10.2.8 (A:) Polygala  99.1 2.2E-11 1.6E-15  114.1   4.4   97    2-98     68-166 (313)
 72 d1a9na_ c.10.2.4 (A:) Spliceso  99.1 4.1E-11   3E-15  100.6   5.5   87    5-94     13-100 (162)
 73 d1ozna_ c.10.2.7 (A:) Reticulo  99.0 8.4E-11 6.1E-15  108.4   6.4   92    4-95    147-239 (284)
 74 d1a9na_ c.10.2.4 (A:) Spliceso  99.0 8.1E-11 5.9E-15   98.7   5.4   91    2-94     33-125 (162)
 75 d1p9ag_ c.10.2.7 (G:) von Will  99.0 3.4E-10 2.5E-14  103.2   7.2   89    2-94     25-113 (266)
 76 d1xkua_ c.10.2.7 (A:) Decorin   98.9 8.4E-10 6.1E-14  102.6   8.2   92    3-95    188-286 (305)
 77 d2ifga3 c.10.2.7 (A:36-191) Hi  98.8 1.1E-09 8.3E-14   90.9   3.5   96    3-99     49-146 (156)
 78 d1j7la_ d.144.1.6 (A:) Type II  98.8   2E-08 1.5E-12   90.8  11.8  148  167-321     8-212 (263)
 79 d1m9la_ c.10.3.1 (A:) Outer ar  98.7   4E-11 2.9E-15  104.2  -7.1   88    2-93     40-127 (198)
 80 d1xkua_ c.10.2.7 (A:) Decorin   98.7   8E-09 5.8E-13   95.7   8.3   86    9-94    170-255 (305)
 81 d1ozna_ c.10.2.7 (A:) Reticulo  98.7 9.5E-09 6.9E-13   94.3   8.5   93    3-95     98-191 (284)
 82 d2omza2 c.10.2.1 (A:33-416) In  98.7 6.7E-09 4.9E-13   99.3   7.2   81    6-91    303-383 (384)
 83 d2omxa2 c.10.2.1 (A:37-235) In  98.7 1.9E-08 1.4E-12   87.0   7.9   83    6-93     58-140 (199)
 84 d1h6ua2 c.10.2.1 (A:36-262) In  98.6 2.8E-08   2E-12   87.8   7.3   79    6-89    147-225 (227)
 85 d1m9la_ c.10.3.1 (A:) Outer ar  98.6 3.8E-10 2.8E-14   97.9  -6.3   91    5-98     65-157 (198)
 86 d1h6ta2 c.10.2.1 (A:31-240) In  98.5   6E-08 4.4E-12   84.5   7.8   81    8-93     44-124 (210)
 87 d2omxa2 c.10.2.1 (A:37-235) In  98.5 1.2E-07   9E-12   81.7   8.7   83    6-93     80-162 (199)
 88 d1h6ta2 c.10.2.1 (A:31-240) In  98.5   1E-07 7.3E-12   83.1   7.2   85    5-94    107-191 (210)
 89 d1nd4a_ d.144.1.6 (A:) Aminogl  98.3 7.2E-07 5.3E-11   79.7   9.9  130  180-321    17-204 (255)
 90 d2omza2 c.10.2.1 (A:33-416) In  98.3 3.1E-07 2.2E-11   87.3   7.2   82    8-94     42-123 (384)
 91 d1koha1 c.10.2.3 (A:201-362) m  98.3 1.4E-07 9.9E-12   78.5   2.4   65    8-73     63-130 (162)
 92 d1xwdc1 c.10.2.7 (C:18-259) Fo  98.2 5.9E-07 4.3E-11   79.7   6.6   91    2-94     23-116 (242)
 93 d1h6ua2 c.10.2.1 (A:36-262) In  98.1 2.2E-06 1.6E-10   75.2   7.8   80   10-94    129-208 (227)
 94 d1jl5a_ c.10.2.6 (A:) Leucine   98.0 5.8E-06 4.2E-10   77.0   9.4   53   11-71     39-91  (353)
 95 d1jl5a_ c.10.2.6 (A:) Leucine   98.0 3.9E-06 2.8E-10   78.2   8.0   55   33-94    283-337 (353)
 96 d1koha1 c.10.2.3 (A:201-362) m  98.0 1.6E-07 1.2E-11   78.1  -2.8   64   31-95     62-129 (162)
 97 d2pula1 d.144.1.6 (A:5-396) Me  97.8 4.1E-05   3E-09   72.7  11.1   76  178-255    31-117 (392)
 98 d1xwdc1 c.10.2.7 (C:18-259) Fo  97.7 1.4E-05   1E-09   70.4   5.8   77   11-88    154-232 (242)
 99 d1zyla1 d.144.1.6 (A:4-328) Rd  97.3 0.00056   4E-08   62.8  10.6  133  186-321    35-219 (325)
100 d1nw1a_ d.144.1.8 (A:) Choline  97.2  0.0007 5.1E-08   63.9  10.4   73  178-256    47-128 (395)
101 d2astb2 c.10.1.3 (B:2136-2419)  97.2 1.8E-05 1.3E-09   71.7  -0.9   85    7-91     43-131 (284)
102 d1z7xw1 c.10.1.1 (W:1-460) Rib  97.2 1.2E-05 9.1E-10   77.4  -2.4   87    7-93     24-124 (460)
103 d2ca6a1 c.10.1.2 (A:2-345) Rna  97.1 2.1E-05 1.5E-09   73.3  -1.5   87    7-93    183-285 (344)
104 d2ppqa1 d.144.1.6 (A:5-320) Ho  97.1  0.0013 9.2E-08   59.9  10.9  156  163-321     3-212 (316)
105 d2ca6a1 c.10.1.2 (A:2-345) Rna  96.9 2.9E-05 2.1E-09   72.3  -2.2   86    8-93    156-255 (344)
106 d1z7xw1 c.10.1.1 (W:1-460) Rib  96.8 6.4E-05 4.7E-09   72.2  -1.0   84   10-93    312-409 (460)
107 d2astb2 c.10.1.3 (B:2136-2419)  96.7 0.00058 4.2E-08   61.4   4.6   83    9-91    147-235 (284)
108 d1pgva_ c.10.1.1 (A:) Tropomod  96.6 0.00025 1.8E-08   58.4   1.6   87    7-93     12-112 (167)
109 d1pgva_ c.10.1.1 (A:) Tropomod  95.3  0.0023 1.7E-07   52.2   1.5   67    5-71     39-113 (167)
110 d1io0a_ c.10.1.1 (A:) Tropomod  93.8   0.006 4.4E-07   49.5   0.4   87    7-93     14-116 (166)
111 d1io0a_ c.10.1.1 (A:) Tropomod  92.3  0.0063 4.6E-07   49.4  -1.7   88    6-93     42-144 (166)
112 d1cjaa_ d.144.1.3 (A:) Actin-f  67.3     9.7  0.0007   32.8   8.2  133  181-319    76-234 (342)
113 d1kq8a_ a.4.5.14 (A:) HFH-1 (H  34.5      15  0.0011   24.2   3.0   28  425-452     3-30  (75)
114 d1e7ua4 d.144.1.4 (A:726-1094)  25.6      13 0.00095   33.0   2.0   25  297-321   220-244 (369)

No 1  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-55  Score=412.73  Aligned_cols=261  Identities=27%  Similarity=0.423  Sum_probs=209.5

Q ss_pred             hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE  249 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e  249 (470)
                      .++|.+.+.||+|+||+||+|+++  ..||||+++..  .....+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            467999999999999999999874  35999998644  34556788999999999999999999999865 45789999


Q ss_pred             cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392          250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS  329 (470)
Q Consensus       250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  329 (470)
                      |+++|+|.+++...+..+++..+..++.|+++||+|||   +++|+||||||+|||++.++.+||+|||+|+........
T Consensus        84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence            99999999999877778999999999999999999999   899999999999999999999999999999876544333


Q ss_pred             ccccccccCccccCccccCC---CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhh-cCCcccccccccc
Q 040392          330 MTQTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDW-LPISTMEVVGANL  405 (470)
Q Consensus       330 ~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  405 (470)
                      .......||+.|+|||++.+   ..++.++|||||||++|||+||+.||.+...... +...+... .+...        
T Consensus       161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~-~~~~~~~~~~~p~~--------  231 (276)
T d1uwha_         161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIFMVGRGYLSPDL--------  231 (276)
T ss_dssp             -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTSCCCCG--------
T ss_pred             ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH-HHHHHhcCCCCCcc--------
Confidence            44455679999999999864   3588999999999999999999999986533221 11111111 11100        


Q ss_pred             cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                             ...+..++.++.+|+.+||+.||++||||.||+++|+.+..+
T Consensus       232 -------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         232 -------SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             -------GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             -------hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence                   011234577899999999999999999999999999998754


No 2  
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9e-55  Score=406.25  Aligned_cols=258  Identities=25%  Similarity=0.395  Sum_probs=205.3

Q ss_pred             CCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecCC
Q 040392          173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMP  252 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~~  252 (470)
                      ++|++.+.||+|+||+||+|++.+++.||||+++.. ....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            578889999999999999999988999999998754 3345678999999999999999999999999999999999999


Q ss_pred             CCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcccc
Q 040392          253 HGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ  332 (470)
Q Consensus       253 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~  332 (470)
                      +|+|.+++......+++..+..++.|+++||+|||   +++|+||||||+|||+++++.+||+|||+++....... ...
T Consensus        84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~-~~~  159 (263)
T d1sm2a_          84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-TSS  159 (263)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCc-eee
Confidence            99999999887778999999999999999999999   89999999999999999999999999999987643322 223


Q ss_pred             cccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhhh
Q 040392          333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIH  412 (470)
Q Consensus       333 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (470)
                      ....||+.|+|||++.+..++.++|||||||++|||+|+..|+...... ..+...+.....                  
T Consensus       160 ~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~-~~~~~~i~~~~~------------------  220 (263)
T d1sm2a_         160 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-SEVVEDISTGFR------------------  220 (263)
T ss_dssp             -----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCH-HHHHHHHHHTCC------------------
T ss_pred             cceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCH-HHHHHHHHhcCC------------------
Confidence            3456899999999999999999999999999999999955444332221 112221111111                  


Q ss_pred             hHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          413 FVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       413 ~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                      ...+..++.++.+++.+||+.||++||||+||+++|+++.++
T Consensus       221 ~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         221 LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence            011234567789999999999999999999999999999653


No 3  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-54  Score=406.20  Aligned_cols=254  Identities=23%  Similarity=0.330  Sum_probs=209.1

Q ss_pred             hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE  249 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e  249 (470)
                      .++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            367999999999999999999864 69999999987543 3345678999999999999999999999999999999999


Q ss_pred             cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392          250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS  329 (470)
Q Consensus       250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  329 (470)
                      |+++|+|.+++... ..+++..+..++.|+++||+|||   +++|+||||||+|||+++++.+||+|||+|+........
T Consensus        84 y~~gg~L~~~l~~~-~~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~  159 (271)
T d1nvra_          84 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  159 (271)
T ss_dssp             CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             ccCCCcHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCcc
Confidence            99999999999654 46899999999999999999999   999999999999999999999999999999877544444


Q ss_pred             ccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392          330 MTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ  408 (470)
Q Consensus       330 ~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (470)
                      ......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||....+.......+.......             
T Consensus       160 ~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~-------------  226 (271)
T d1nvra_         160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL-------------  226 (271)
T ss_dssp             CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTS-------------
T ss_pred             ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC-------------
Confidence            44456789999999999988776 5789999999999999999999976544333222221111000             


Q ss_pred             hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                           .....++.++.+|+.+||+.||++|||+.|+++|
T Consensus       227 -----~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         227 -----NPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             -----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             -----CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence                 0112346678899999999999999999999764


No 4  
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-53  Score=402.19  Aligned_cols=250  Identities=26%  Similarity=0.340  Sum_probs=210.7

Q ss_pred             CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392          173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM  251 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~  251 (470)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++........+.+.+|+++++.++||||+++++++.+.+..++||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            4799999999999999999975 469999999998665556677899999999999999999999999999999999999


Q ss_pred             CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCccc
Q 040392          252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT  331 (470)
Q Consensus       252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  331 (470)
                      ++|+|.+++.+.  .+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+.+....  ..
T Consensus       100 ~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~--~~  172 (293)
T d1yhwa1         100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SK  172 (293)
T ss_dssp             TTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--CC
T ss_pred             CCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeecccc--cc
Confidence            999999988654  4899999999999999999999   9999999999999999999999999999998764322  23


Q ss_pred             ccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhh
Q 040392          332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDI  411 (470)
Q Consensus       332 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (470)
                      ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+........+.                
T Consensus       173 ~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~~~~~~~~~----------------  235 (293)
T d1yhwa1         173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPE----------------  235 (293)
T ss_dssp             BCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSCC----------------
T ss_pred             ccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH-HHHHHHhCCCCC----------------
Confidence            345679999999999999999999999999999999999999997533221 111111111000                


Q ss_pred             hhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          412 HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       412 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                       ...+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus       236 -~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         236 -LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             -CSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             -CCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             01123456779999999999999999999999875


No 5  
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-53  Score=396.86  Aligned_cols=255  Identities=22%  Similarity=0.422  Sum_probs=216.6

Q ss_pred             hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM  251 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~  251 (470)
                      .++|++.+.||+|+||+||+|++++++.||||+++... ...+.+.+|++++++++||||++++|++.++...++||||+
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~-~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~   81 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM   81 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS-SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECC
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc-CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEcc
Confidence            36899999999999999999999889999999997543 34567899999999999999999999999999999999999


Q ss_pred             CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCccc
Q 040392          252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT  331 (470)
Q Consensus       252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  331 (470)
                      ++|+|.+++......+++..+.+++.|+++||+|||   +++|+||||||+||++++++.+||+|||+++...... ...
T Consensus        82 ~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~-~~~  157 (258)
T d1k2pa_          82 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTS  157 (258)
T ss_dssp             TTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS-CCC
T ss_pred             CCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCC-cee
Confidence            999999998887778999999999999999999999   8999999999999999999999999999998765432 223


Q ss_pred             ccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCchh
Q 040392          332 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED  410 (470)
Q Consensus       332 ~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (470)
                      .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||......+.  ...+....                 
T Consensus       158 ~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~--~~~i~~~~-----------------  218 (258)
T d1k2pa_         158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--AEHIAQGL-----------------  218 (258)
T ss_dssp             CCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--HHHHHTTC-----------------
T ss_pred             ecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHH--HHHHHhCC-----------------
Confidence            344678999999999999999999999999999999998 8999987543321  11111110                 


Q ss_pred             hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHH
Q 040392          411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI  451 (470)
Q Consensus       411 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i  451 (470)
                       +...+..++.++.+|+.+||+.||++|||++|++++|.+|
T Consensus       219 -~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         219 -RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             -CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             -CCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence             0111234567799999999999999999999999999653


No 6  
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-53  Score=402.03  Aligned_cols=252  Identities=24%  Similarity=0.337  Sum_probs=210.9

Q ss_pred             CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392          173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM  251 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~  251 (470)
                      +.|++.+.||+|+||+||+|+.. +|+.||||+++.......+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            46888999999999999999864 68999999998777777788999999999999999999999999999999999999


Q ss_pred             CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCccc
Q 040392          252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT  331 (470)
Q Consensus       252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~  331 (470)
                      ++|+|.+++.+....+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|......  ...
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~--~~~  166 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--IQR  166 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH--HHH
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCC--ccc
Confidence            999999998776667999999999999999999999   999999999999999999999999999999754321  122


Q ss_pred             ccccccCccccCccccC-----CCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392          332 QTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL  406 (470)
Q Consensus       332 ~~~~~~t~~y~aPE~~~-----~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (470)
                      .....||+.|+|||++.     +..++.++|||||||++|||+||+.||......+. +........+            
T Consensus       167 ~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~-~~~i~~~~~~------------  233 (288)
T d2jfla1         167 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV-LLKIAKSEPP------------  233 (288)
T ss_dssp             HTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHHHHHSCCC------------
T ss_pred             ccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH-HHHHHcCCCC------------
Confidence            33567999999999874     45688999999999999999999999976433221 1111111100            


Q ss_pred             CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                           ....+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus       234 -----~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         234 -----TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             -----CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             -----CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                 001123457789999999999999999999999875


No 7  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.1e-53  Score=405.85  Aligned_cols=258  Identities=23%  Similarity=0.424  Sum_probs=203.5

Q ss_pred             CCCCCCCeecccCceEEEEEEeCC-C---cEEEEEEeecc-cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392          173 DGFSENNLIGRGGFGSVYKARLGD-G---MEVAVKVFNLQ-CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV  247 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~~-~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv  247 (470)
                      ++|++.+.||+|+||+||+|++.. +   ..||||.+... .....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv  105 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMII  105 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence            457778899999999999998642 3   35899988654 344566789999999999999999999999999999999


Q ss_pred             EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392          248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED  327 (470)
Q Consensus       248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  327 (470)
                      |||+++|+|.+++......+++.++..++.|+++||+|||   +++|+||||||+|||++.++.+||+|||+|+.+....
T Consensus       106 ~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~  182 (299)
T d1jpaa_         106 TEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT  182 (299)
T ss_dssp             EECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEccCCC
Confidence            9999999999999887778999999999999999999999   8999999999999999999999999999998765432


Q ss_pred             Ccc---cccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392          328 QSM---TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA  403 (470)
Q Consensus       328 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (470)
                      ...   ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.+....  .+...+....          
T Consensus       183 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--~~~~~i~~~~----------  250 (299)
T d1jpaa_         183 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--DVINAIEQDY----------  250 (299)
T ss_dssp             -------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTC----------
T ss_pred             CcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC----------
Confidence            221   1223457899999999999999999999999999999998 89999764332  1222221110          


Q ss_pred             cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392          404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD  453 (470)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~  453 (470)
                              +...+..++.++.+|+.+||+.||++||||.||++.|+++..
T Consensus       251 --------~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         251 --------RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             --------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             --------CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence                    011123457789999999999999999999999999999864


No 8  
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2e-53  Score=396.05  Aligned_cols=246  Identities=25%  Similarity=0.379  Sum_probs=206.9

Q ss_pred             CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392          173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL  248 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~  248 (470)
                      ++|++.+.||+|+||+||+|+.. +++.||+|++....   ......+.+|+++++.++||||+++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            57899999999999999999864 68999999986432   334566888999999999999999999999999999999


Q ss_pred             ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392          249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ  328 (470)
Q Consensus       249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~  328 (470)
                      ||+++|+|.+++.... .+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|......  
T Consensus        86 Ey~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~--  159 (263)
T d2j4za1          86 EYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--  159 (263)
T ss_dssp             ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC--
T ss_pred             eecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCCC--
Confidence            9999999999997654 5899999999999999999999   999999999999999999999999999999865432  


Q ss_pred             cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392          329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ  408 (470)
Q Consensus       329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (470)
                        ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+.....    ..            
T Consensus       160 --~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~----~~------------  220 (263)
T d2j4za1         160 --RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-TYKRISR----VE------------  220 (263)
T ss_dssp             --CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHT----TC------------
T ss_pred             --cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH-HHHHHHc----CC------------
Confidence              2234679999999999999999999999999999999999999997532211 1111111    00            


Q ss_pred             hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                          ...+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus       221 ----~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~h  255 (263)
T d2j4za1         221 ----FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH  255 (263)
T ss_dssp             ----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred             ----CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcC
Confidence                00122346778999999999999999999999874


No 9  
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.4e-53  Score=396.57  Aligned_cols=258  Identities=23%  Similarity=0.400  Sum_probs=211.0

Q ss_pred             hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM  251 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~  251 (470)
                      .++|++.+.||+|+||.||+|++++++.||||+++... ...+.+.+|++++++++|||||++++++.+ +..++||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence            35788899999999999999999888999999997543 345678999999999999999999998865 4568999999


Q ss_pred             CCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392          252 PHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM  330 (470)
Q Consensus       252 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  330 (470)
                      ++|+|.+++.... ..+++..+..++.||++||+|||   +++|+||||||+|||+++++.+||+|||+|+.+.... ..
T Consensus        90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~-~~  165 (272)
T d1qpca_          90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YT  165 (272)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EE
T ss_pred             CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCc-cc
Confidence            9999999875443 35899999999999999999999   8999999999999999999999999999998775322 23


Q ss_pred             cccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchh
Q 040392          331 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED  410 (470)
Q Consensus       331 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (470)
                      ......||+.|+|||++.++.++.++|||||||++|||+||..|+....... .....+.....                
T Consensus       166 ~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~-~~~~~i~~~~~----------------  228 (272)
T d1qpca_         166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGYR----------------  228 (272)
T ss_dssp             CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHHHTTCC----------------
T ss_pred             cccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhcCC----------------
Confidence            3345678999999999998899999999999999999999766654432221 11111111110                


Q ss_pred             hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       411 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                        ...+..++.++.+|+.+||+.||++||||.||++.|+++..+
T Consensus       229 --~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         229 --MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --CCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence              111234577899999999999999999999999999998653


No 10 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.8e-53  Score=398.83  Aligned_cols=263  Identities=23%  Similarity=0.398  Sum_probs=215.8

Q ss_pred             CCCCCCCe-ecccCceEEEEEEeC---CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392          173 DGFSENNL-IGRGGFGSVYKARLG---DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV  247 (470)
Q Consensus       173 ~~~~~~~~-ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv  247 (470)
                      ++|.+.+. ||+|+||.||+|.+.   ++..||||+++... ....+.+.+|++++++++|||||++++++.. +..++|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lv   86 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV   86 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEE
Confidence            45666664 999999999999753   35679999997543 3456778999999999999999999999865 457899


Q ss_pred             EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392          248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED  327 (470)
Q Consensus       248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  327 (470)
                      |||+++|+|.+++...+..+++..+..++.|+++||+|||   +++|+||||||+||+++.++.+||+|||+++.+....
T Consensus        87 mE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  163 (285)
T d1u59a_          87 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD  163 (285)
T ss_dssp             EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred             EEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhcccccc
Confidence            9999999999998777778999999999999999999999   8999999999999999999999999999998775433


Q ss_pred             Cc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392          328 QS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL  405 (470)
Q Consensus       328 ~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (470)
                      .. .......||+.|+|||++.+..++.++|||||||++|||+| |+.||......+  +...+....            
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~--~~~~i~~~~------------  229 (285)
T d1u59a_         164 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFIEQGK------------  229 (285)
T ss_dssp             CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHHHTTC------------
T ss_pred             cccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC------------
Confidence            22 22334568999999999998999999999999999999998 999998754322  222221111            


Q ss_pred             cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhhc
Q 040392          406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRNV  459 (470)
Q Consensus       406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~~  459 (470)
                            +...+..++.++.+|+.+||+.||++|||+.+|++.|+.+..++....
T Consensus       230 ------~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~~~  277 (285)
T d1u59a_         230 ------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV  277 (285)
T ss_dssp             ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred             ------CCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhhcc
Confidence                  011234567889999999999999999999999999998876655444


No 11 
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.1e-52  Score=396.61  Aligned_cols=257  Identities=25%  Similarity=0.392  Sum_probs=213.2

Q ss_pred             hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY  250 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~  250 (470)
                      .++|++.+.||+|+||+||+|++. +++.||||+++... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            457888899999999999999875 58899999987543 3456789999999999999999999999999999999999


Q ss_pred             CCCCChHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392          251 MPHGSLEKYMYSS-NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS  329 (470)
Q Consensus       251 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  329 (470)
                      +++|+|.+++... ...+++..+..++.|+++||+|||   +++|+||||||+|||+++++.+||+|||+|+...... .
T Consensus        95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~-~  170 (287)
T d1opja_          95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-Y  170 (287)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS-S
T ss_pred             ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccceeecCCCC-c
Confidence            9999999998754 457899999999999999999999   8999999999999999999999999999998764332 2


Q ss_pred             ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCch
Q 040392          330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE  409 (470)
Q Consensus       330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (470)
                      .......|++.|+|||++.+..++.++|||||||++|||++|..||....+.. .+...+.....               
T Consensus       171 ~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~-~~~~~i~~~~~---------------  234 (287)
T d1opja_         171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYR---------------  234 (287)
T ss_dssp             EEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCC---------------
T ss_pred             eeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH-HHHHHHhcCCC---------------
Confidence            33344568899999999999999999999999999999999877765432211 11222211111               


Q ss_pred             hhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392          410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR  452 (470)
Q Consensus       410 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~  452 (470)
                         ...+..++.++.+|+.+||+.||++|||+.|+++.|+.+.
T Consensus       235 ---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         235 ---MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             ---CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence               1112345778999999999999999999999999998874


No 12 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-52  Score=392.32  Aligned_cols=260  Identities=25%  Similarity=0.439  Sum_probs=205.6

Q ss_pred             hCCCCCCCeecccCceEEEEEEeCCC-----cEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeee
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLGDG-----MEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA  245 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~  245 (470)
                      .+.|+..+.||+|+||.||+|.+.+.     ..||||++.... ......+.+|++++++++|||||+++|++.+.+..+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceE
Confidence            35678889999999999999976432     479999986543 334557889999999999999999999999999999


Q ss_pred             EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392          246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG  325 (470)
Q Consensus       246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  325 (470)
                      +||||+.+|++.+++......+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++.+..
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  162 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  162 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             EEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcccC
Confidence            999999999999999887778999999999999999999999   89999999999999999999999999999987654


Q ss_pred             CCC-cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccc
Q 040392          326 EDQ-SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGAN  404 (470)
Q Consensus       326 ~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (470)
                      ... ........||+.|+|||++.+..++.++|||||||++|||++|..|+....... .+...+....           
T Consensus       163 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~-~~~~~i~~~~-----------  230 (283)
T d1mqba_         163 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGF-----------  230 (283)
T ss_dssp             -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTTC-----------
T ss_pred             CCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHH-HHHHHHhccC-----------
Confidence            322 223334568999999999999999999999999999999999766654432221 1222211111           


Q ss_pred             ccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392          405 LLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD  453 (470)
Q Consensus       405 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~  453 (470)
                             +...+..++.++.+|+.+||+.||++||||.||++.|+++.+
T Consensus       231 -------~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         231 -------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             -------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             -------CCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence                   011223457789999999999999999999999999998864


No 13 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.8e-53  Score=398.49  Aligned_cols=250  Identities=24%  Similarity=0.364  Sum_probs=205.4

Q ss_pred             CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392          173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL  248 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~  248 (470)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            5799999999999999999986 469999999987532   334567889999999999999999999999999999999


Q ss_pred             ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392          249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ  328 (470)
Q Consensus       249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~  328 (470)
                      ||+++|+|.+++...+ .+++..+..++.|++.||+|||   +.+|+||||||+|||+++++.+||+|||+|+.+.....
T Consensus        88 Ey~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred             EccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecccCCc
Confidence            9999999999987654 6899999999999999999999   99999999999999999999999999999988754444


Q ss_pred             cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392          329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ  408 (470)
Q Consensus       329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (470)
                      .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......+  +...+   .....           
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~i---~~~~~-----------  227 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL--IFQKI---IKLEY-----------  227 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH---HTTCC-----------
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH--HHHHH---HcCCC-----------
Confidence            444455689999999999999999999999999999999999999997632211  11111   11000           


Q ss_pred             hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                           ..+..++.++.+|+.+||+.||++|||++|++++
T Consensus       228 -----~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~  261 (288)
T d1uu3a_         228 -----DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  261 (288)
T ss_dssp             -----CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred             -----CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCC
Confidence                 0112346678999999999999999999998664


No 14 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-52  Score=404.19  Aligned_cols=256  Identities=23%  Similarity=0.376  Sum_probs=210.2

Q ss_pred             hCCCCCCCeecccCceEEEEEEeCC------CcEEEEEEeecc-cchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCe
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLGD------GMEVAVKVFNLQ-CGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEF  243 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~  243 (470)
                      .++|++.+.||+|+||+||+|++..      ...||+|.+... .......+.+|+.++.++ +|||||++++++.+.+.
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            3678899999999999999997532      236999998644 334556788999999998 89999999999999999


Q ss_pred             eeEEEecCCCCChHHhhhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCC
Q 040392          244 KALVLEYMPHGSLEKYMYSSN----------------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKP  301 (470)
Q Consensus       244 ~~lv~e~~~~g~L~~~l~~~~----------------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp  301 (470)
                      .++||||+++|+|.+++....                      ..+++..++.++.|+++||+|||   +++|+||||||
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH---~~~IiHRDlKp  192 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA  192 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSG
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCch
Confidence            999999999999999997653                      24788999999999999999999   89999999999


Q ss_pred             CCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCcccc
Q 040392          302 SNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFN  380 (470)
Q Consensus       302 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~  380 (470)
                      +||+++.++.+||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||+| |+.||.+...
T Consensus       193 ~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~  272 (325)
T d1rjba_         193 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV  272 (325)
T ss_dssp             GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             hccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH
Confidence            999999999999999999987765544444455678999999999999999999999999999999998 8999986543


Q ss_pred             CcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHH
Q 040392          381 GEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLL  449 (470)
Q Consensus       381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~  449 (470)
                      .+ .+...+.....                  ...+..++.++.+|+.+||+.||++|||++||+++|.
T Consensus       273 ~~-~~~~~~~~~~~------------------~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         273 DA-NFYKLIQNGFK------------------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             SH-HHHHHHHTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HH-HHHHHHhcCCC------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            32 22222221111                  1123345778999999999999999999999999985


No 15 
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-52  Score=391.47  Aligned_cols=254  Identities=21%  Similarity=0.278  Sum_probs=194.2

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeecc--CCeeeE
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSN--EEFKAL  246 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--~~~~~l  246 (470)
                      .++|++.+.||+|+||+||+|+. .+|+.||||++....  ....+.+.+|++++++++||||+++++++.+  ....++
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            46799999999999999999976 468999999986542  3345668899999999999999999998854  456789


Q ss_pred             EEecCCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhcCC--CCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392          247 VLEYMPHGSLEKYMYS---SNYILDIFQRLNIMIDVASALEYLHFGY--SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK  321 (470)
Q Consensus       247 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~--~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~  321 (470)
                      ||||+++|+|.+++.+   .+..+++..++.++.|++.||+|||+..  ..+|+||||||+|||++.++.+||+|||+|+
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~  162 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  162 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence            9999999999999864   2357899999999999999999999311  1349999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccc
Q 040392          322 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVV  401 (470)
Q Consensus       322 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (470)
                      .+....  .......||+.|+|||++.+..++.++|||||||++|||+||+.||......  .+...+......      
T Consensus       163 ~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~--~~~~~i~~~~~~------  232 (269)
T d2java1         163 ILNHDT--SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREGKFR------  232 (269)
T ss_dssp             HC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTCCC------
T ss_pred             ecccCC--CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH--HHHHHHHcCCCC------
Confidence            764322  2233467999999999999999999999999999999999999999764322  111111111000      


Q ss_pred             cccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                                  ..+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus       233 ------------~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         233 ------------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             ------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             ------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence                        0112346779999999999999999999999864


No 16 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-51  Score=385.29  Aligned_cols=245  Identities=24%  Similarity=0.386  Sum_probs=197.1

Q ss_pred             CCCCeecccCceEEEEEEeC-CCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeecc----CCeeeEEE
Q 040392          176 SENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSN----EEFKALVL  248 (470)
Q Consensus       176 ~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~----~~~~~lv~  248 (470)
                      +..+.||+|+||+||+|++. +++.||+|.+...  .....+.+.+|++++++++||||+++++++..    ....++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            45568999999999999864 6889999998654  23345678899999999999999999999854    35678999


Q ss_pred             ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eeecCCCCCCeeeC-CCCCeEEeeeccccccCC
Q 040392          249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAP--IIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTG  325 (470)
Q Consensus       249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dlkp~Nill~-~~~~~kl~Dfg~a~~~~~  325 (470)
                      ||+++|+|.+++.+.. .+++..+..++.||++||+|||   +++  |+||||||+|||++ +++.+||+|||+|+....
T Consensus        92 E~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          92 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             eCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            9999999999997654 6899999999999999999999   777  99999999999996 588999999999986432


Q ss_pred             CCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392          326 EDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL  405 (470)
Q Consensus       326 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (470)
                      .    ......||+.|+|||++.+ .++.++|||||||++|||++|+.||....+.............+.          
T Consensus       168 ~----~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~----------  232 (270)
T d1t4ha_         168 S----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA----------  232 (270)
T ss_dssp             T----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG----------
T ss_pred             C----ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCc----------
Confidence            1    2234679999999998865 699999999999999999999999976433221111111100000          


Q ss_pred             cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                              ..+..++.++.+++.+||+.||++|||+.|+++|
T Consensus       233 --------~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         233 --------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             --------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             --------ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence                    1122345678999999999999999999999874


No 17 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.4e-52  Score=390.41  Aligned_cols=251  Identities=24%  Similarity=0.375  Sum_probs=203.4

Q ss_pred             CeecccCceEEEEEEeC---CCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecCCC
Q 040392          179 NLIGRGGFGSVYKARLG---DGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYMPH  253 (470)
Q Consensus       179 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~  253 (470)
                      +.||+|+||+||+|.+.   .++.||||+++..  .....+.+.+|++++++++||||+++++++..+ ..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCC
Confidence            47999999999999753   3568999998643  233456789999999999999999999999654 56899999999


Q ss_pred             CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc-ccc
Q 040392          254 GSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS-MTQ  332 (470)
Q Consensus       254 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~  332 (470)
                      |+|.+++.... .+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++.+...... ...
T Consensus        92 g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~  167 (277)
T d1xbba_          92 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ  167 (277)
T ss_dssp             EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC-
T ss_pred             CcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccccccccc
Confidence            99999997654 6899999999999999999999   899999999999999999999999999999876543322 223


Q ss_pred             cccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCchhh
Q 040392          333 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDI  411 (470)
Q Consensus       333 ~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  411 (470)
                      ....||+.|+|||.+.+..++.++|||||||++|||+| |+.||.+....+  +...+....                  
T Consensus       168 ~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~--~~~~i~~~~------------------  227 (277)
T d1xbba_         168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAMLEKGE------------------  227 (277)
T ss_dssp             ---CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHTTC------------------
T ss_pred             cccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH--HHHHHHcCC------------------
Confidence            34578999999999999999999999999999999998 899998643321  222221110                  


Q ss_pred             hhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          412 HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       412 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                      +...+..++.++.+|+.+||+.||++|||+.+|++.|+.+..+
T Consensus       228 ~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         228 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence            0112244578899999999999999999999999999887544


No 18 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.5e-52  Score=401.08  Aligned_cols=268  Identities=19%  Similarity=0.289  Sum_probs=206.5

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE  249 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e  249 (470)
                      .++|++.+.||+|+||+||+|+. .+|+.||+|+++... ......+.+|+++++.++|||||++++++.+.+..++|||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            57899999999999999999986 468999999997553 3345678899999999999999999999999999999999


Q ss_pred             cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392          250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSA-PIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ  328 (470)
Q Consensus       250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~  328 (470)
                      |+++|+|.+++.+.+ .+++..+..++.|++.||.|||   ++ +|+||||||+|||++.++.+||+|||+|+.+...  
T Consensus        85 y~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--  158 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS--  158 (322)
T ss_dssp             CCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred             cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCC--
Confidence            999999999997654 5899999999999999999999   64 8999999999999999999999999999866321  


Q ss_pred             cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhh--hhcC---------Cc-
Q 040392          329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVN--DWLP---------IS-  396 (470)
Q Consensus       329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~--~~~~---------~~-  396 (470)
                        .....+||+.|+|||++.+..++.++||||+||++|||++|+.||......+........  ....         .. 
T Consensus       159 --~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (322)
T d1s9ja_         159 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP  236 (322)
T ss_dssp             --TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---------------------
T ss_pred             --ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccccc
Confidence              223468999999999999999999999999999999999999999764332211100000  0000         00 


Q ss_pred             -ccccccccccCc-hh-hhh--------HhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          397 -TMEVVGANLLSQ-ED-IHF--------VAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       397 -~~~~~~~~~~~~-~~-~~~--------~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                       .....+...... .. ...        ......+.++.+|+.+||+.||++|||++|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         237 LSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             ---------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence             000000000000 00 000        0001235678999999999999999999999986


No 19 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=9.2e-52  Score=400.25  Aligned_cols=253  Identities=19%  Similarity=0.270  Sum_probs=211.5

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY  250 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~  250 (470)
                      .++|++.+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            46899999999999999999986 46999999999766555667788999999999999999999999999999999999


Q ss_pred             CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC--CCCCeEEeeeccccccCCCCC
Q 040392          251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD--DNMVAHLSDFSIAKLLTGEDQ  328 (470)
Q Consensus       251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~--~~~~~kl~Dfg~a~~~~~~~~  328 (470)
                      +++|+|.+++......+++..+..++.||+.||+|||   +++|+||||||+|||++  .++.+||+|||+|+.+.... 
T Consensus       105 ~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~-  180 (350)
T d1koaa2         105 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ-  180 (350)
T ss_dssp             CCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS-
T ss_pred             CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheeccccc-
Confidence            9999999999776667999999999999999999999   99999999999999995  46789999999998764322 


Q ss_pred             cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392          329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ  408 (470)
Q Consensus       329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (470)
                        ......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .+...........            
T Consensus       181 --~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~------------  245 (350)
T d1koaa2         181 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE-TLRNVKSCDWNMD------------  245 (350)
T ss_dssp             --CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCSC------------
T ss_pred             --ccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCC------------
Confidence              2344679999999999999999999999999999999999999997532211 1111111110000            


Q ss_pred             hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                          ......++.++.+|+.+||..||++|||+.|+++|
T Consensus       246 ----~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         246 ----DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             ----CGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             ----cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                01112346778999999999999999999999986


No 20 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=7.6e-52  Score=394.13  Aligned_cols=252  Identities=19%  Similarity=0.265  Sum_probs=192.4

Q ss_pred             hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE  249 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e  249 (470)
                      .+.|++.+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+++++.++||||+++++++.+++..++|||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            467999999999999999999864 68999999987543 2334567789999999999999999999999999999999


Q ss_pred             cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---CCCCeEEeeeccccccCCC
Q 040392          250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGE  326 (470)
Q Consensus       250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~a~~~~~~  326 (470)
                      |+++|+|.+++... ..+++..+..++.|++.||+|||   +++|+||||||+||++.   +++.+||+|||+|+.....
T Consensus        88 ~~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~  163 (307)
T d1a06a_          88 LVSGGELFDRIVEK-GFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG  163 (307)
T ss_dssp             CCCSCBHHHHHHTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred             ccCCCcHHHhhhcc-cCCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEccCC
Confidence            99999999999754 46899999999999999999999   99999999999999994   5789999999999865422


Q ss_pred             CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392          327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL  406 (470)
Q Consensus       327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (470)
                         ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+  ....+......           
T Consensus       164 ---~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~i~~~~~~-----------  227 (307)
T d1a06a_         164 ---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--LFEQILKAEYE-----------  227 (307)
T ss_dssp             ------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHTTCCC-----------
T ss_pred             ---CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHH--HHHHHhccCCC-----------
Confidence               22234679999999999999999999999999999999999999997643221  11111110000           


Q ss_pred             CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                          ........++.++.+|+.+||+.||++|||+.|+++|
T Consensus       228 ----~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         228 ----FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             ----CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ----CCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence                0001112346778999999999999999999999985


No 21 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=1.8e-51  Score=398.58  Aligned_cols=253  Identities=20%  Similarity=0.284  Sum_probs=211.8

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY  250 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~  250 (470)
                      .++|++.+.||+|+||.||+|+. .+|+.||||++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            46799999999999999999986 47999999999866555566788999999999999999999999999999999999


Q ss_pred             CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC--CCCCeEEeeeccccccCCCCC
Q 040392          251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD--DNMVAHLSDFSIAKLLTGEDQ  328 (470)
Q Consensus       251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~--~~~~~kl~Dfg~a~~~~~~~~  328 (470)
                      +++|+|.+++......+++..+..++.||+.||+|||   +++|+||||||+|||++  .++.+||+|||+|..+.... 
T Consensus       108 ~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~-  183 (352)
T d1koba_         108 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-  183 (352)
T ss_dssp             CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred             CCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCCC-
Confidence            9999999988777777999999999999999999999   99999999999999997  67899999999998775332 


Q ss_pred             cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392          329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ  408 (470)
Q Consensus       329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (470)
                        ......||+.|+|||++.+..++.++||||+||++|||+||+.||.+....+ .+...........      .     
T Consensus       184 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~~~~~------~-----  249 (352)
T d1koba_         184 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE-TLQNVKRCDWEFD------E-----  249 (352)
T ss_dssp             --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHHCCCCCC------S-----
T ss_pred             --ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCC------c-----
Confidence              2344679999999999999999999999999999999999999997643221 1111111110000      0     


Q ss_pred             hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                           .....++.++.+|+.+||+.||++|||+.|+++|
T Consensus       250 -----~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         250 -----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             -----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             -----ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                 0012346778999999999999999999999885


No 22 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.6e-51  Score=385.11  Aligned_cols=258  Identities=23%  Similarity=0.384  Sum_probs=202.5

Q ss_pred             hCCCCCCCeecccCceEEEEEEeCC----CcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL  246 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l  246 (470)
                      .++|++.+.||+|+||.||+|++..    +..||||.++... ....+.+.+|++++++++||||+++++++.+ +..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeEEE
Confidence            3578899999999999999997642    4568999886443 3345678899999999999999999999964 56789


Q ss_pred             EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392          247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE  326 (470)
Q Consensus       247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  326 (470)
                      ||||+++|+|.+++......+++..+..++.|+++||+|||   +++++||||||+||+++.++.+||+|||+|+.....
T Consensus        85 v~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~  161 (273)
T d1mp8a_          85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS  161 (273)
T ss_dssp             EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred             EEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheeccCC
Confidence            99999999999998887778999999999999999999999   999999999999999999999999999999876432


Q ss_pred             CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392          327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL  405 (470)
Q Consensus       327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (470)
                      . ........||+.|+|||.+.+..++.++|||||||++|||++ |..||......+.  ...+.....           
T Consensus       162 ~-~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~--~~~i~~~~~-----------  227 (273)
T d1mp8a_         162 T-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRIENGER-----------  227 (273)
T ss_dssp             ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHHHTTCC-----------
T ss_pred             c-ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH--HHHHHcCCC-----------
Confidence            2 223344568999999999999999999999999999999998 8889876543321  111111110           


Q ss_pred             cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                             ...+..++.++.+|+.+||+.||++|||+.||+++|+++.+.
T Consensus       228 -------~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         228 -------LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence                   011234577899999999999999999999999999998644


No 23 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-51  Score=392.24  Aligned_cols=257  Identities=25%  Similarity=0.406  Sum_probs=208.0

Q ss_pred             CCCCCCCeecccCceEEEEEEeC-CCc----EEEEEEeecc-cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeE
Q 040392          173 DGFSENNLIGRGGFGSVYKARLG-DGM----EVAVKVFNLQ-CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKAL  246 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~l  246 (470)
                      ++|++.+.||+|+||+||+|.+. +|+    .||+|.+... ..+..+.+.+|++++++++|||||+++++|.++. .++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~-~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-EEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-eeE
Confidence            46899999999999999999764 444    5888887643 3445677899999999999999999999998754 568


Q ss_pred             EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCC
Q 040392          247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE  326 (470)
Q Consensus       247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  326 (470)
                      ++||+.+|+|.+++......+++..++.++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+.....
T Consensus        88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  164 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  164 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred             EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence            88999999999999888888999999999999999999999   899999999999999999999999999999987654


Q ss_pred             CCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccc
Q 040392          327 DQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANL  405 (470)
Q Consensus       327 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  405 (470)
                      ..........||+.|+|||++.++.++.++|||||||++|||+| |..||......+  +...+....            
T Consensus       165 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~--~~~~i~~~~------------  230 (317)
T d1xkka_         165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKGE------------  230 (317)
T ss_dssp             CC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG--HHHHHHHTC------------
T ss_pred             cccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcCC------------
Confidence            44444455678999999999999999999999999999999999 788887643332  222222111            


Q ss_pred             cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392          406 LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD  453 (470)
Q Consensus       406 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~  453 (470)
                            +...+..++.++.+|+.+||+.||++|||+.|++++|.++..
T Consensus       231 ------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         231 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             ------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------CCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence                  011234457789999999999999999999999999998864


No 24 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-50  Score=384.90  Aligned_cols=252  Identities=21%  Similarity=0.314  Sum_probs=208.0

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccc------hhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG------RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK  244 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~  244 (470)
                      .++|++.+.||+|+||+||+|+. .+|+.||||++.....      ...+.+.+|++++++++||||+++++++.+.+..
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   88 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV   88 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            46799999999999999999986 4699999999865421      2346788999999999999999999999999999


Q ss_pred             eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC----CeEEeeeccc
Q 040392          245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM----VAHLSDFSIA  320 (470)
Q Consensus       245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~----~~kl~Dfg~a  320 (470)
                      ++||||+++|+|.+++...+ .+++..+..++.|++.||+|||   +.+|+||||||+||+++.++    .+|++|||+|
T Consensus        89 ~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a  164 (293)
T d1jksa_          89 ILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA  164 (293)
T ss_dssp             EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred             EEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhhh
Confidence            99999999999999997654 6899999999999999999999   99999999999999998777    5999999999


Q ss_pred             cccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccc
Q 040392          321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV  400 (470)
Q Consensus       321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (470)
                      .......   ......+|+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+......    .    
T Consensus       165 ~~~~~~~---~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~-~~~~i~~~----~----  232 (293)
T d1jksa_         165 HKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANVSAV----N----  232 (293)
T ss_dssp             EECTTSC---BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHTT----C----
T ss_pred             hhcCCCc---cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH-HHHHHHhc----C----
Confidence            8764322   2334578999999999999999999999999999999999999997632221 11111110    0    


Q ss_pred             ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                              .......+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus       233 --------~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         233 --------YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             --------CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             --------CCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                    000111223457788999999999999999999999875


No 25 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=4.6e-51  Score=388.84  Aligned_cols=262  Identities=26%  Similarity=0.409  Sum_probs=214.2

Q ss_pred             HHHhhCCCCCCCeecccCceEEEEEEeC------CCcEEEEEEeecccc-hhhhhHHHHHHHHhcCCCCcceeEEeeecc
Q 040392          168 LCRATDGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQCG-RALKGFDVECEMMKSIRHRNLIKVISTCSN  240 (470)
Q Consensus       168 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~  240 (470)
                      ++...++|++.+.||+|+||+||+|++.      +++.||||+++.... ...+.+.+|+++++.++||||+++++++..
T Consensus         8 ~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~   87 (301)
T d1lufa_           8 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV   87 (301)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             ccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeecc
Confidence            3344678999999999999999999853      457899999875533 345678999999999999999999999999


Q ss_pred             CCeeeEEEecCCCCChHHhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeec
Q 040392          241 EEFKALVLEYMPHGSLEKYMYSSN-----------------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHC  297 (470)
Q Consensus       241 ~~~~~lv~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~  297 (470)
                      ....++||||+++|+|.+++....                       ..+++..++.++.|++.||+|||   +++++||
T Consensus        88 ~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH---~~~ivHr  164 (301)
T d1lufa_          88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHR  164 (301)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred             CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcc---cCCeEee
Confidence            999999999999999999996532                       24788999999999999999999   9999999


Q ss_pred             CCCCCCeeeCCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCC-CCCC
Q 040392          298 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK-KPTN  376 (470)
Q Consensus       298 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~-~p~~  376 (470)
                      ||||+|||++.++.+||+|||+|+.+.............+++.|+|||.+.+..++.++|||||||++|||++|. .||.
T Consensus       165 DlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~  244 (301)
T d1lufa_         165 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  244 (301)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             EEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCC
Confidence            999999999999999999999998765444444445567899999999999999999999999999999999986 4665


Q ss_pred             ccccCcchhhHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392          377 EIFNGEMTLKHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR  452 (470)
Q Consensus       377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~  452 (470)
                      .....+  ....+.....                  ...+..++.++.+|+.+||+.||++||||.||++.|++|.
T Consensus       245 ~~~~~e--~~~~v~~~~~------------------~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         245 GMAHEE--VIYYVRDGNI------------------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             TSCHHH--HHHHHHTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CCCHHH--HHHHHHcCCC------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            532221  2222211110                  0112345778999999999999999999999999999874


No 26 
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.3e-51  Score=384.47  Aligned_cols=257  Identities=25%  Similarity=0.403  Sum_probs=205.6

Q ss_pred             hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEecC
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEYM  251 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~~  251 (470)
                      .++|++.+.||+|+||.||+|++++++.||||+++.. ....+.+.+|+.++++++|||||++++++.+. ..++||||+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~lv~Ey~   93 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYM   93 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCEEEECCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEecC-CeEEEEEec
Confidence            4679999999999999999999988889999998644 33456799999999999999999999999654 568999999


Q ss_pred             CCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392          252 PHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM  330 (470)
Q Consensus       252 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  330 (470)
                      ++|+|..++.... ..+++.+++.++.||+.||+|||   +.+|+||||||+|||++.++++||+|||+++..... ...
T Consensus        94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~-~~~  169 (285)
T d1fmka3          94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EYT  169 (285)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred             CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCC-Cce
Confidence            9999998886543 46899999999999999999999   899999999999999999999999999999876432 223


Q ss_pred             cccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCchh
Q 040392          331 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQED  410 (470)
Q Consensus       331 ~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (470)
                      ......+|+.|+|||++..+.++.++||||||+++|||++|..|+........ +...+.....                
T Consensus       170 ~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~-~~~~i~~~~~----------------  232 (285)
T d1fmka3         170 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVERGYR----------------  232 (285)
T ss_dssp             ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHTTCC----------------
T ss_pred             eeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH-HHHHHHhcCC----------------
Confidence            33446789999999999999999999999999999999997776654333221 2222211111                


Q ss_pred             hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392          411 IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD  453 (470)
Q Consensus       411 ~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~  453 (470)
                        ...+..++.++.+++.+||+.||++||++.+|++.|+++..
T Consensus       233 --~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         233 --MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             --CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence              01123457789999999999999999999999999988753


No 27 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=4.4e-51  Score=388.91  Aligned_cols=245  Identities=26%  Similarity=0.335  Sum_probs=201.3

Q ss_pred             CCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392          174 GFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE  249 (470)
Q Consensus       174 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e  249 (470)
                      .|+..+.||+|+||+||+|+. .+|+.||||++....   ....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            488899999999999999975 468899999987543   2345668899999999999999999999999999999999


Q ss_pred             cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392          250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS  329 (470)
Q Consensus       250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  329 (470)
                      |+++|+|..++... ..+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+|.....    
T Consensus        96 ~~~~g~l~~~~~~~-~~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~----  167 (309)
T d1u5ra_          96 YCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----  167 (309)
T ss_dssp             CCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS----
T ss_pred             ecCCCchHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCC----
Confidence            99999997666544 46899999999999999999999   99999999999999999999999999999986532    


Q ss_pred             ccccccccCccccCccccCC---CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccccccc
Q 040392          330 MTQTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLL  406 (470)
Q Consensus       330 ~~~~~~~~t~~y~aPE~~~~---~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (470)
                        .....||+.|+|||++.+   +.++.++|||||||++|||++|+.||.+....+ .+........+.         . 
T Consensus       168 --~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~-~~~~i~~~~~~~---------~-  234 (309)
T d1u5ra_         168 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPA---------L-  234 (309)
T ss_dssp             --BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCC---------C-
T ss_pred             --CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCC---------C-
Confidence              234579999999998864   458999999999999999999999997642221 111111110000         0 


Q ss_pred             CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          407 SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       407 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                              .+..++.++.+|+.+||+.||++|||+.|+++|
T Consensus       235 --------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         235 --------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             --------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             --------CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence                    012346678999999999999999999999874


No 28 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.1e-51  Score=380.97  Aligned_cols=251  Identities=29%  Similarity=0.440  Sum_probs=201.1

Q ss_pred             hCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeecc-CCeeeEEEec
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN-EEFKALVLEY  250 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-~~~~~lv~e~  250 (470)
                      .++|++.+.||+|+||.||+|++ .|+.||||+++..  ...+.+.+|++++++++||||+++++++.+ .+..++||||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey   82 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   82 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred             HHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence            45688889999999999999998 4889999999643  345678999999999999999999999854 4567999999


Q ss_pred             CCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392          251 MPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS  329 (470)
Q Consensus       251 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  329 (470)
                      +++|+|.+++.... ..+++..+++++.||+.||.|||   +.+|+||||||+||+++.++.+|++|||+++.....   
T Consensus        83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~---  156 (262)
T d1byga_          83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---  156 (262)
T ss_dssp             CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred             cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCC---
Confidence            99999999997644 35899999999999999999999   899999999999999999999999999999865322   


Q ss_pred             ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392          330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ  408 (470)
Q Consensus       330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (470)
                        .....++..|+|||++.+..++.++||||||+++|||+| |+.||......  .+..++.....              
T Consensus       157 --~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~--~~~~~i~~~~~--------------  218 (262)
T d1byga_         157 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYK--------------  218 (262)
T ss_dssp             -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTTCC--------------
T ss_pred             --CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCC--------------
Confidence              233467889999999999999999999999999999998 67777654222  22222221111              


Q ss_pred             hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392          409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD  453 (470)
Q Consensus       409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~  453 (470)
                          ...+..++.++.+|+.+||+.||++||||.|++++|++++.
T Consensus       219 ----~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         219 ----MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             ----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence                11123446779999999999999999999999999999874


No 29 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.6e-50  Score=382.15  Aligned_cols=259  Identities=25%  Similarity=0.427  Sum_probs=210.5

Q ss_pred             CCeecccCceEEEEEEeCC----CcEEEEEEeecc-cchhhhhHHHHHHHHhcCCCCcceeEEeeecc-CCeeeEEEecC
Q 040392          178 NNLIGRGGFGSVYKARLGD----GMEVAVKVFNLQ-CGRALKGFDVECEMMKSIRHRNLIKVISTCSN-EEFKALVLEYM  251 (470)
Q Consensus       178 ~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-~~~~~lv~e~~  251 (470)
                      .++||+|+||+||+|++.+    ...||||+++.. .....+.+.+|++++++++||||++++|++.+ +...++||||+
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            4689999999999998643    236899998643 44556789999999999999999999999865 45789999999


Q ss_pred             CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc--
Q 040392          252 PHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS--  329 (470)
Q Consensus       252 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--  329 (470)
                      ++|+|.+++.......++..+..++.|+++||.|||   +.+|+||||||+|||+++++.+||+|||+++........  
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence            999999999888778889999999999999999999   999999999999999999999999999999876543222  


Q ss_pred             ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCch
Q 040392          330 MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQE  409 (470)
Q Consensus       330 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  409 (470)
                      .......||+.|+|||.+.+..++.++||||||+++|||+||+.||....... .+..++.....               
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~-~~~~~i~~g~~---------------  252 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF-DITVYLLQGRR---------------  252 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHTTCC---------------
T ss_pred             eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHH-HHHHHHHcCCC---------------
Confidence            22334578999999999999999999999999999999999888876533221 12222211110               


Q ss_pred             hhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHhhh
Q 040392          410 DIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLLRN  458 (470)
Q Consensus       410 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~~~  458 (470)
                         ...+..++.++.+|+.+||+.||++||+|.||+++|+++..++.++
T Consensus       253 ---~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~  298 (311)
T d1r0pa_         253 ---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE  298 (311)
T ss_dssp             ---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred             ---CCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhh
Confidence               1112345677999999999999999999999999999998765554


No 30 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3e-50  Score=383.22  Aligned_cols=261  Identities=23%  Similarity=0.378  Sum_probs=202.6

Q ss_pred             hCCCCCCCeecccCceEEEEEEeC------CCcEEEEEEeeccc-chhhhhHHHHHHHHhcC-CCCcceeEEeeeccC-C
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-GRALKGFDVECEMMKSI-RHRNLIKVISTCSNE-E  242 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~-~  242 (470)
                      .++|++.+.||+|+||.||+|++.      +++.||||+++... ....+.+..|..++.++ +|+||+.+++++.+. .
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            467999999999999999999753      35689999986543 33455677788877776 689999999987654 5


Q ss_pred             eeeEEEecCCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC
Q 040392          243 FKALVLEYMPHGSLEKYMYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD  307 (470)
Q Consensus       243 ~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~  307 (470)
                      ..++||||+++|+|.+++....               ..+++..+..++.|+++||+|||   +++|+||||||+|||++
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccceeEC
Confidence            6789999999999999996542               34889999999999999999999   99999999999999999


Q ss_pred             CCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCC-CCCCccccCcchhh
Q 040392          308 DNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK-KPTNEIFNGEMTLK  386 (470)
Q Consensus       308 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~-~p~~~~~~~~~~~~  386 (470)
                      .++.+||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||+||. .||......+ .+.
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~-~~~  247 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFC  247 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HHH
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH-HHH
Confidence            99999999999998765554444555678999999999999999999999999999999999965 5666543322 222


Q ss_pred             HHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          387 HWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                      ..+......                  ..+..++.++.+++.+||+.||++|||+.|++++|+++..+
T Consensus       248 ~~~~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         248 RRLKEGTRM------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             HHHHHTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCC------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            222211111                  11233467799999999999999999999999999998654


No 31 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.2e-50  Score=387.08  Aligned_cols=249  Identities=22%  Similarity=0.290  Sum_probs=208.7

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEE
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALV  247 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv  247 (470)
                      .++|++.+.||+|+||.||+|+. .+|+.||||+++...   ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            46799999999999999999986 579999999997542   33456688899999999999999999999999999999


Q ss_pred             EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392          248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED  327 (470)
Q Consensus       248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  327 (470)
                      |||+++|+|.+++...+ .+++..+..++.|++.||+|||   +++|+||||||+|||++.+|.+||+|||+|+......
T Consensus        84 ~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~  159 (337)
T d1o6la_          84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred             eeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccccCC
Confidence            99999999999987655 5889999999999999999999   9999999999999999999999999999998654322


Q ss_pred             CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392          328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS  407 (470)
Q Consensus       328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (470)
                        ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+  +...+...   .           
T Consensus       160 --~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~--~~~~i~~~---~-----------  221 (337)
T d1o6la_         160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILME---E-----------  221 (337)
T ss_dssp             --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHC---C-----------
T ss_pred             --cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH--HHHHHhcC---C-----------
Confidence              23345689999999999999999999999999999999999999998643221  11111100   0           


Q ss_pred             chhhhhHhhhhhHHHHHHHHhhccCCCccCCCC-----HHHHHHH
Q 040392          408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN-----AREIVAK  447 (470)
Q Consensus       408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~el~~~  447 (470)
                           ...+..++.++.+|+.+||++||++||+     +.|+++|
T Consensus       222 -----~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         222 -----IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             -----CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             -----CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence                 0012234677899999999999999995     8888875


No 32 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.6e-50  Score=381.75  Aligned_cols=275  Identities=22%  Similarity=0.297  Sum_probs=202.5

Q ss_pred             CCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHH--HHHHHhcCCCCcceeEEeeeccCC----eeeE
Q 040392          173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDV--ECEMMKSIRHRNLIKVISTCSNEE----FKAL  246 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~--E~~~l~~l~h~nIv~~~~~~~~~~----~~~l  246 (470)
                      .+|...+.||+|+||.||+|++ +|+.||||+++...   ...+..  |+..+..++||||+++++++.+.+    ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            4566778999999999999997 58999999986442   223333  555556789999999999996543    5789


Q ss_pred             EEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392          247 VLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFG-----YSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK  321 (470)
Q Consensus       247 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~  321 (470)
                      ||||+++|+|.+++++.  .+++..+.+++.|++.||+|+|..     ..++|+||||||+|||++.++.+||+|||+++
T Consensus        79 v~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~  156 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV  156 (303)
T ss_dssp             EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             EEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence            99999999999999765  489999999999999999999932     13699999999999999999999999999998


Q ss_pred             ccCCCCCc--ccccccccCccccCccccCCCC------CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc
Q 040392          322 LLTGEDQS--MTQTQTLATIGYMAPEYGREGR------VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL  393 (470)
Q Consensus       322 ~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~------~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~  393 (470)
                      ........  .......||+.|+|||++.+..      ++.++|||||||++|||+||..||......+...........
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~  236 (303)
T d1vjya_         157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP  236 (303)
T ss_dssp             EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence            77543322  2334567999999999987543      677899999999999999999887654333222111110000


Q ss_pred             CCc-cc-ccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          394 PIS-TM-EVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       394 ~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                      ... .. ...+..... ..........++..+.+|+.+||+.||++|||+.||++.|+++.++
T Consensus       237 ~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         237 SVEEMRKVVCEQKLRP-NIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             CHHHHHHHHTTSCCCC-CCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHhccccCC-CCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            000 00 001111100 0011222334567799999999999999999999999999999754


No 33 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=7.1e-50  Score=382.02  Aligned_cols=245  Identities=25%  Similarity=0.314  Sum_probs=205.9

Q ss_pred             CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392          173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL  248 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~  248 (470)
                      ++|++.+.||+|+||+||+|+. .+|+.||||+++...   ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            5789999999999999999986 469999999997542   334567889999999999999999999999999999999


Q ss_pred             ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392          249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ  328 (470)
Q Consensus       249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~  328 (470)
                      ||++||+|..++.... .+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+.....  
T Consensus        84 E~~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~--  157 (316)
T d1fota_          84 DYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV--  157 (316)
T ss_dssp             CCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred             eecCCccccccccccc-cccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEeccc--
Confidence            9999999999886655 5788888999999999999999   999999999999999999999999999999876432  


Q ss_pred             cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392          329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ  408 (470)
Q Consensus       329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (470)
                         ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......+. .........               
T Consensus       158 ---~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~~---------------  218 (316)
T d1fota_         158 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-YEKILNAEL---------------  218 (316)
T ss_dssp             ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHHCCC---------------
T ss_pred             ---cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH-HHHHHcCCC---------------
Confidence               2346799999999999999999999999999999999999999976322211 111111000               


Q ss_pred             hhhhhHhhhhhHHHHHHHHhhccCCCccCCC-----CHHHHHHH
Q 040392          409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRI-----NAREIVAK  447 (470)
Q Consensus       409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~el~~~  447 (470)
                           ..+..++.++.+++.+||..||.+|+     |++|+++|
T Consensus       219 -----~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         219 -----RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             -----CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -----CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence                 01123466788999999999999996     89999886


No 34 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-50  Score=379.47  Aligned_cols=256  Identities=26%  Similarity=0.395  Sum_probs=200.3

Q ss_pred             CCCCCCCeecccCceEEEEEEeC--CC--cEEEEEEeecc---cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeee
Q 040392          173 DGFSENNLIGRGGFGSVYKARLG--DG--MEVAVKVFNLQ---CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKA  245 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~  245 (470)
                      ++|++.+.||+|+||.||+|+..  ++  ..||||++...   .....+.+.+|++++++++||||++++|++.++ ..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-chh
Confidence            56889999999999999999753  22  47899998654   234456789999999999999999999999764 568


Q ss_pred             EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392          246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG  325 (470)
Q Consensus       246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  325 (470)
                      +||||+++|++.+++......+++..+..++.|++.||.|||   +++|+||||||+||+++.++.+||+|||+++....
T Consensus        87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            999999999999998877777999999999999999999999   89999999999999999999999999999998754


Q ss_pred             CCCc-ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392          326 EDQS-MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA  403 (470)
Q Consensus       326 ~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (470)
                      .... .......++..|+|||.+.+..++.++||||||+++|||+| |+.||......+  ...++...   .       
T Consensus       164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~--~~~~i~~~---~-------  231 (273)
T d1u46a_         164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILHKIDKE---G-------  231 (273)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTS---C-------
T ss_pred             CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH--HHHHHHhC---C-------
Confidence            4332 22334567889999999999999999999999999999998 899997643222  11121111   0       


Q ss_pred             cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHH
Q 040392          404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKI  451 (470)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i  451 (470)
                             .+...+..++.++.+|+.+||+.||++||||.||.+.|++.
T Consensus       232 -------~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         232 -------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             -------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             -------CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                   00111234567799999999999999999999999998875


No 35 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=5.5e-50  Score=376.99  Aligned_cols=260  Identities=24%  Similarity=0.365  Sum_probs=203.8

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCC----e
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEE----F  243 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~----~  243 (470)
                      .++|++.+.||+|+||.||+|+. .+|+.||||+++...   ......+.+|+++++.++||||+++++++...+    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~   85 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   85 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred             cceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCce
Confidence            47799999999999999999975 579999999997543   234567889999999999999999999986543    4


Q ss_pred             eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392          244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL  323 (470)
Q Consensus       244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~  323 (470)
                      .++||||+++|+|.+++...+ .+++.++..++.|++.||+|||   +.+|+||||||+||+++.++..+++|||.+...
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~  161 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI  161 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEEC
T ss_pred             EEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhh
Confidence            789999999999999886654 6899999999999999999999   999999999999999999999999999998765


Q ss_pred             CCCC-CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccccc
Q 040392          324 TGED-QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVG  402 (470)
Q Consensus       324 ~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  402 (470)
                      .... .........||+.|+|||++.+..++.++|||||||++|||+||+.||......+. ....+......       
T Consensus       162 ~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~~~~~~~~~-------  233 (277)
T d1o6ya_         162 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVREDPIP-------  233 (277)
T ss_dssp             C----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCCCCC-------
T ss_pred             ccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH-HHHHHhcCCCC-------
Confidence            4322 22334456799999999999999999999999999999999999999976332211 11111110000       


Q ss_pred             ccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCC-CHHHHHHHHHHHH
Q 040392          403 ANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRI-NAREIVAKLLKIR  452 (470)
Q Consensus       403 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~el~~~L~~i~  452 (470)
                               .......++.++.+++.+||+.||++|| |++++++.|.+++
T Consensus       234 ---------~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         234 ---------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             ---------GGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ---------CchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence                     0011123467799999999999999999 8999999998875


No 36 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-49  Score=380.04  Aligned_cols=262  Identities=21%  Similarity=0.347  Sum_probs=215.8

Q ss_pred             hCCCCCCCeecccCceEEEEEEe------CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCe
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL------GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEF  243 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~  243 (470)
                      .++|++.+.||+|+||.||+|++      .+++.||||+++... ......+.+|+.+++++ +|||||++++++.+...
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            46788899999999999999975      346789999997543 33455688999999999 69999999999999999


Q ss_pred             eeEEEecCCCCChHHhhhcCC-----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 040392          244 KALVLEYMPHGSLEKYMYSSN-----------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL  306 (470)
Q Consensus       244 ~~lv~e~~~~g~L~~~l~~~~-----------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill  306 (470)
                      .++||||+++|+|.+++....                 ..+++..+..++.||++||+|||   +++++||||||+||++
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccccccccc
Confidence            999999999999999987543                 35889999999999999999999   9999999999999999


Q ss_pred             CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhh
Q 040392          307 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK  386 (470)
Q Consensus       307 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~  386 (470)
                      +.++.+|++|||.++...............||+.|+|||.+.+..++.++|||||||++|||+|+..|+.........+.
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~  258 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            99999999999999987655555555567899999999999999999999999999999999995555443333322333


Q ss_pred             HHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          387 HWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                      ..+.......                  .+..++.++.+|+.+||+.||++||||.||++.|+++...
T Consensus       259 ~~i~~~~~~~------------------~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         259 KMIKEGFRML------------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCC------------------CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            3333221111                  1223467799999999999999999999999999887543


No 37 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-49  Score=381.23  Aligned_cols=252  Identities=19%  Similarity=0.278  Sum_probs=208.3

Q ss_pred             hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY  250 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~  250 (470)
                      .++|++.+.||+|+||+||+|... +|+.||||+++.... ....+.+|+++|+.++||||+++++++.+.+..|+||||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~-~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~   82 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc-cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEec
Confidence            468999999999999999999865 688999999975532 344578899999999999999999999999999999999


Q ss_pred             CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC--CCCeEEeeeccccccCCCCC
Q 040392          251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD--NMVAHLSDFSIAKLLTGEDQ  328 (470)
Q Consensus       251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~  328 (470)
                      +++|+|.+++...+..+++.++..++.||+.||+|||   +.+|+||||||+|||++.  ...+||+|||++......  
T Consensus        83 ~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~--  157 (321)
T d1tkia_          83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--  157 (321)
T ss_dssp             CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccC--
Confidence            9999999999877767999999999999999999999   999999999999999985  458999999999876432  


Q ss_pred             cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392          329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ  408 (470)
Q Consensus       329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (470)
                       .......+|+.|+|||...+..++.++||||+||++|+|++|+.||......+ .+.........              
T Consensus       158 -~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~-~~~~i~~~~~~--------------  221 (321)
T d1tkia_         158 -DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIENIMNAEYT--------------  221 (321)
T ss_dssp             -CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHTCCC--------------
T ss_pred             -CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCC--------------
Confidence             22344678999999999999999999999999999999999999997643221 11111110000              


Q ss_pred             hhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                        ........++.++.+|+.+||..||++|||+.|+++|
T Consensus       222 --~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         222 --FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             --CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             --CChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence              0011122346778999999999999999999999985


No 38 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=1.4e-49  Score=372.88  Aligned_cols=251  Identities=24%  Similarity=0.341  Sum_probs=205.6

Q ss_pred             CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccc---------hhhhhHHHHHHHHhcCC-CCcceeEEeeeccC
Q 040392          173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG---------RALKGFDVECEMMKSIR-HRNLIKVISTCSNE  241 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~  241 (470)
                      ++|++.+.||+|+||+||+|+. .+|+.||||++.....         ...+.+.+|+.++++++ ||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            6799999999999999999986 4789999999875421         12345778999999997 99999999999999


Q ss_pred             CeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392          242 EFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK  321 (470)
Q Consensus       242 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~  321 (470)
                      +..++||||+++|+|.+++.... .+++..+..++.||++||+|||   +++|+||||||+||+++.++.+||+|||+++
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~  158 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC  158 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             cceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccchhee
Confidence            99999999999999999997654 6899999999999999999999   8999999999999999999999999999998


Q ss_pred             ccCCCCCcccccccccCccccCccccCC------CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC
Q 040392          322 LLTGEDQSMTQTQTLATIGYMAPEYGRE------GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI  395 (470)
Q Consensus       322 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~------~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  395 (470)
                      ......   ......||+.|+|||.+.+      ..++.++||||+||++|||++|+.||......+ ............
T Consensus       159 ~~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~-~~~~i~~~~~~~  234 (277)
T d1phka_         159 QLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML-MLRMIMSGNYQF  234 (277)
T ss_dssp             ECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCC
T ss_pred             EccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH-HHHHHHhCCCCC
Confidence            764322   2344679999999998753      347889999999999999999999998643221 111111111000


Q ss_pred             cccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          396 STMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                                      .......++.++.+|+.+||+.||++|||+.|+++|
T Consensus       235 ----------------~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         235 ----------------GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             ----------------CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             ----------------CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                            001122457789999999999999999999999875


No 39 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-49  Score=375.79  Aligned_cols=258  Identities=28%  Similarity=0.428  Sum_probs=209.7

Q ss_pred             hCCCCCCCeecccCceEEEEEEeC--------CCcEEEEEEeecccc-hhhhhHHHHHHHHhcC-CCCcceeEEeeeccC
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLG--------DGMEVAVKVFNLQCG-RALKGFDVECEMMKSI-RHRNLIKVISTCSNE  241 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~  241 (470)
                      .++|++.+.||+|+||.||+|+..        ++..||||+++.+.. .....+.+|...+.++ +||||++++++|.++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            467888999999999999999742        235799999976543 4457788899988888 799999999999999


Q ss_pred             CeeeEEEecCCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeee
Q 040392          242 EFKALVLEYMPHGSLEKYMYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLL  306 (470)
Q Consensus       242 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill  306 (470)
                      +..++||||+++|+|.+++....               ..+++.+++.++.|++.||+|||   +.+|+||||||+|||+
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~NiLl  168 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV  168 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccceee
Confidence            99999999999999999997553               35899999999999999999999   9999999999999999


Q ss_pred             CCCCCeEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHh-CCCCCCccccCcchh
Q 040392          307 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-GKKPTNEIFNGEMTL  385 (470)
Q Consensus       307 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~t-g~~p~~~~~~~~~~~  385 (470)
                      +.++.+||+|||+++...............+|+.|+|||.+.++.++.++||||||+++|||++ |..||......  ..
T Consensus       169 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~--~~  246 (299)
T d1fgka_         169 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--EL  246 (299)
T ss_dssp             CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH
T ss_pred             cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH--HH
Confidence            9999999999999987765555455556779999999999999999999999999999999998 78887653322  12


Q ss_pred             hHHhhhhcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392          386 KHWVNDWLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIR  452 (470)
Q Consensus       386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~  452 (470)
                      ...+......                  ..+..++.++.+|+.+||+.||.+||||.||++.|+++.
T Consensus       247 ~~~i~~~~~~------------------~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         247 FKLLKEGHRM------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHHHTTCCC------------------CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHcCCCC------------------CCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            2222211111                  112334677999999999999999999999999999985


No 40 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=8.3e-49  Score=381.74  Aligned_cols=250  Identities=21%  Similarity=0.301  Sum_probs=201.2

Q ss_pred             hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhH---HHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGF---DVECEMMKSIRHRNLIKVISTCSNEEFK  244 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~nIv~~~~~~~~~~~~  244 (470)
                      .++|++.+.||+|+||.||+|+.. +|+.||||++....   ......+   ..|+++++.++||||+++++++.+.+..
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            468999999999999999999864 69999999986432   1112223   3457778888999999999999999999


Q ss_pred             eEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccC
Q 040392          245 ALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT  324 (470)
Q Consensus       245 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~  324 (470)
                      ++||||+++|+|.+++.... .+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+.+.
T Consensus        83 ~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~  158 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS  158 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEECS
T ss_pred             EEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceeeecC
Confidence            99999999999999997654 5789999999999999999999   9999999999999999999999999999998764


Q ss_pred             CCCCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392          325 GEDQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA  403 (470)
Q Consensus       325 ~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (470)
                      ..    ......||+.|+|||++.. ..++.++|||||||++|||+||+.||.........  ...........      
T Consensus       159 ~~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~--~~~~~~~~~~~------  226 (364)
T d1omwa3         159 KK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLTMAV------  226 (364)
T ss_dssp             SS----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHH--HHHHHSSSCCC------
T ss_pred             CC----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhcccCCC------
Confidence            32    2234579999999999865 56899999999999999999999999864332211  11111111000      


Q ss_pred             cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCC-----HHHHHHH
Q 040392          404 NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN-----AREIVAK  447 (470)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~el~~~  447 (470)
                                ..+..++.++.+|+.+||+.||++|||     ++|+++|
T Consensus       227 ----------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         227 ----------ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             ----------CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             ----------CCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence                      011234677899999999999999999     7888875


No 41 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.4e-49  Score=377.08  Aligned_cols=256  Identities=27%  Similarity=0.451  Sum_probs=205.4

Q ss_pred             CCCCCCCeecccCceEEEEEEeC-CCc--EEEEEEeecc-cchhhhhHHHHHHHHhcC-CCCcceeEEeeeccCCeeeEE
Q 040392          173 DGFSENNLIGRGGFGSVYKARLG-DGM--EVAVKVFNLQ-CGRALKGFDVECEMMKSI-RHRNLIKVISTCSNEEFKALV  247 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~~~~~~~~~~~~~lv  247 (470)
                      ++|++.+.||+|+||.||+|++. +|.  .||||.+... .....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            67888999999999999999764 344  4788887543 344567789999999999 799999999999999999999


Q ss_pred             EecCCCCChHHhhhcC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCe
Q 040392          248 LEYMPHGSLEKYMYSS---------------NYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVA  312 (470)
Q Consensus       248 ~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~  312 (470)
                      |||+++|+|.++++..               ...+++..+.+++.||++||.|||   +++|+||||||+|||++.++.+
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCCce
Confidence            9999999999999654               256899999999999999999999   9999999999999999999999


Q ss_pred             EEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCC-CCCccccCcchhhHHhhh
Q 040392          313 HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKK-PTNEIFNGEMTLKHWVND  391 (470)
Q Consensus       313 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~-p~~~~~~~~~~~~~~~~~  391 (470)
                      ||+|||+++....   ........||..|+|||.+.+..++.++|||||||++|||++|.. ||......  .+...+..
T Consensus       167 kl~DfG~a~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~--~~~~~i~~  241 (309)
T d1fvra_         167 KIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQ  241 (309)
T ss_dssp             EECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHGGG
T ss_pred             EEccccccccccc---cccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH--HHHHHHHh
Confidence            9999999975432   222234568999999999999999999999999999999999765 56543221  22222211


Q ss_pred             hcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          392 WLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                      ..                  +...+..++.++.+|+.+||+.||++||||.||+++|+++...
T Consensus       242 ~~------------------~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         242 GY------------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             TC------------------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             cC------------------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            10                  1112234577899999999999999999999999999998754


No 42 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=7e-49  Score=380.24  Aligned_cols=245  Identities=20%  Similarity=0.232  Sum_probs=206.2

Q ss_pred             CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc---chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEE
Q 040392          173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC---GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVL  248 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~  248 (470)
                      ++|++++.||+|+||.||+|+. .+|+.||||++....   ....+.+.+|+++++.++||||+++++++.+....++||
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            5799999999999999999986 469999999986432   234566889999999999999999999999999999999


Q ss_pred             ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCC
Q 040392          249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ  328 (470)
Q Consensus       249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~  328 (470)
                      ||+.+|+|.+++...+ .+++..+..++.||+.||.|||   +++|+||||||+|||++.++.+||+|||+|+.+...  
T Consensus       121 e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~--  194 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--  194 (350)
T ss_dssp             ECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred             ccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc--
Confidence            9999999999997654 6899999999999999999999   999999999999999999999999999999876432  


Q ss_pred             cccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccCc
Q 040392          329 SMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLSQ  408 (470)
Q Consensus       329 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  408 (470)
                         .....||+.|+|||++.+..++.++|||||||++|||+||+.||......  .....+.....              
T Consensus       195 ---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~i~~~~~--------------  255 (350)
T d1rdqe_         195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--QIYEKIVSGKV--------------  255 (350)
T ss_dssp             ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC--------------
T ss_pred             ---cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH--HHHHHHhcCCC--------------
Confidence               23467999999999999999999999999999999999999999753211  11111111000              


Q ss_pred             hhhhhHhhhhhHHHHHHHHhhccCCCccCCC-----CHHHHHHH
Q 040392          409 EDIHFVAKEQCVSCVFNLAMECTVESPEQRI-----NAREIVAK  447 (470)
Q Consensus       409 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~el~~~  447 (470)
                           ..+..++.++.+++.+||..||.+|+     |+.|+++|
T Consensus       256 -----~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         256 -----RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             -----CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             -----CCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence                 01123467789999999999999994     89999875


No 43 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1e-48  Score=377.05  Aligned_cols=252  Identities=21%  Similarity=0.277  Sum_probs=199.4

Q ss_pred             hCCCCCCC-eecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhc-CCCCcceeEEeeecc----CCee
Q 040392          172 TDGFSENN-LIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKS-IRHRNLIKVISTCSN----EEFK  244 (470)
Q Consensus       172 ~~~~~~~~-~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~~~~~~~~----~~~~  244 (470)
                      .++|.+.+ .||+|+||+||+|+. .+++.||||+++.     ...+.+|++++.+ .+||||+++++++.+    ....
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~   84 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   84 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEE
Confidence            46788765 699999999999976 5799999999863     2456779988655 589999999999864    4678


Q ss_pred             eEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC---CCCeEEeeeccc
Q 040392          245 ALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD---NMVAHLSDFSIA  320 (470)
Q Consensus       245 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~---~~~~kl~Dfg~a  320 (470)
                      ++|||||+||+|.+++...+ ..+++.++..++.|++.||+|||   +.+|+||||||+|||++.   ++.+||+|||+|
T Consensus        85 ~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a  161 (335)
T d2ozaa1          85 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA  161 (335)
T ss_dssp             EEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHH---HcCCcccccccccccccccccccccccccccee
Confidence            99999999999999997653 46899999999999999999999   999999999999999975   567999999999


Q ss_pred             cccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCccccc
Q 040392          321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEV  400 (470)
Q Consensus       321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  400 (470)
                      +......   ......||+.|+|||++.+..++.++|||||||++|+|+||+.||.+....+. ... +......     
T Consensus       162 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~-~~~-~~~~i~~-----  231 (335)
T d2ozaa1         162 KETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPG-MKTRIRM-----  231 (335)
T ss_dssp             EECCCCC---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----------CCCS-----
T ss_pred             eeccCCC---ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH-HHH-HHHHHhc-----
Confidence            8765432   23446799999999999999999999999999999999999999976432211 000 0000000     


Q ss_pred             ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                            ............++.++.+|+.+||+.||++|||+.|+++|
T Consensus       232 ------~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         232 ------GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             ------CSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             ------CCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence                  00000011123457789999999999999999999999885


No 44 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.6e-49  Score=375.28  Aligned_cols=259  Identities=22%  Similarity=0.373  Sum_probs=212.8

Q ss_pred             hCCCCCCCeecccCceEEEEEEeC------CCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCee
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLG------DGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFK  244 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~  244 (470)
                      .++|++.+.||+|+||+||+|.+.      +++.||||+++... .+....+.+|++++++++||||+++++++...+..
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~   98 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT   98 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCce
Confidence            467888899999999999999753      35789999997543 34455688999999999999999999999999999


Q ss_pred             eEEEecCCCCChHHhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEe
Q 040392          245 ALVLEYMPHGSLEKYMYSSN---------YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLS  315 (470)
Q Consensus       245 ~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~  315 (470)
                      ++||||+++|+|.+++....         ..+++..+.+++.|+++||.|||   +++|+||||||+|||++.++++||+
T Consensus        99 ~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~  175 (308)
T d1p4oa_          99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIG  175 (308)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEEC
T ss_pred             eEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCceEEEe
Confidence            99999999999999986432         34688999999999999999999   8999999999999999999999999


Q ss_pred             eeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCC-CCCCccccCcchhhHHhhhhcC
Q 040392          316 DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGK-KPTNEIFNGEMTLKHWVNDWLP  394 (470)
Q Consensus       316 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~  394 (470)
                      |||+|+.+.............+|+.|+|||.+.+..++.++||||||+++|||+||. .||......+     +......
T Consensus       176 DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~-----~~~~i~~  250 (308)
T d1p4oa_         176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-----VLRFVME  250 (308)
T ss_dssp             CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----HHHHHHT
T ss_pred             ecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHh
Confidence            999998775544444455567899999999999999999999999999999999985 6665532221     1111111


Q ss_pred             CcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHH
Q 040392          395 ISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRD  453 (470)
Q Consensus       395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~  453 (470)
                      ...               ...+..++..+.+++.+||+.||++|||+.||+++|++..+
T Consensus       251 ~~~---------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         251 GGL---------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             TCC---------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CCC---------------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            110               11123456789999999999999999999999999988743


No 45 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.9e-49  Score=377.57  Aligned_cols=247  Identities=25%  Similarity=0.338  Sum_probs=202.8

Q ss_pred             CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc---chhhhhHHHHHHHHh-cCCCCcceeEEeeeccCCeeeEE
Q 040392          173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC---GRALKGFDVECEMMK-SIRHRNLIKVISTCSNEEFKALV  247 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~h~nIv~~~~~~~~~~~~~lv  247 (470)
                      ++|++.+.||+|+||+||+|+.. +|+.||||+++...   ....+.+..|..++. .++||||+++++++.+++..|+|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            57899999999999999999764 68999999997542   233445666776655 68999999999999999999999


Q ss_pred             EecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCC
Q 040392          248 LEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED  327 (470)
Q Consensus       248 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  327 (470)
                      |||+++|+|.+++.... .+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+++..... 
T Consensus        82 mEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~-  156 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG-  156 (320)
T ss_dssp             EECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-
T ss_pred             EeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhcccc-
Confidence            99999999999997654 5889999999999999999999   899999999999999999999999999999865432 


Q ss_pred             CcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccccccC
Q 040392          328 QSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGANLLS  407 (470)
Q Consensus       328 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  407 (470)
                       ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+....+  +...+....+             
T Consensus       157 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~--~~~~i~~~~~-------------  220 (320)
T d1xjda_         157 -DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFHSIRMDNP-------------  220 (320)
T ss_dssp             -TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCC-------------
T ss_pred             -cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH--HHHHHHcCCC-------------
Confidence             233345679999999999999999999999999999999999999997643221  1111111000             


Q ss_pred             chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHH-HHHH
Q 040392          408 QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAR-EIVA  446 (470)
Q Consensus       408 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-el~~  446 (470)
                            ..+..++.++.+|+.+||+.||++||++. |+++
T Consensus       221 ------~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         221 ------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             ------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             ------CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                  01123467789999999999999999995 7765


No 46 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.9e-48  Score=370.23  Aligned_cols=269  Identities=23%  Similarity=0.258  Sum_probs=202.9

Q ss_pred             CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392          173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE  249 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e  249 (470)
                      ++|++++.||+|+||+||+|+. .+|+.||||+++...  ......+.+|++++++++||||+++++++.+....++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            6899999999999999999986 579999999986543  2345678899999999999999999999999999999999


Q ss_pred             cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392          250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS  329 (470)
Q Consensus       250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  329 (470)
                      |+.++.+..........+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||.|+.....  .
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~--~  156 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--V  156 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC--S
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccCC--c
Confidence            99765444444444567999999999999999999999   999999999999999999999999999999876432  2


Q ss_pred             ccccccccCccccCccccCCCC-CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhh-hcCCc-c-ccccc-cc
Q 040392          330 MTQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVND-WLPIS-T-MEVVG-AN  404 (470)
Q Consensus       330 ~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~-~~  404 (470)
                      .......||+.|+|||.+.... ++.++||||+||++|+|++|+.||......+ .+...... ..+.. . ..... +.
T Consensus       157 ~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~  235 (298)
T d1gz8a_         157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMPD  235 (298)
T ss_dssp             BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             ccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHHHHHhcCCCchhhccccccccc
Confidence            2334467999999999876655 5789999999999999999999997643221 11111110 00000 0 00000 00


Q ss_pred             cc----C-chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          405 LL----S-QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       405 ~~----~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                      ..    . ............+.++.+|+.+||+.||++|||+.|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            00    0 0000011122446778999999999999999999999986


No 47 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-48  Score=369.62  Aligned_cols=263  Identities=23%  Similarity=0.259  Sum_probs=196.5

Q ss_pred             CCCeecccCceEEEEEEeC-CCcEEEEEEeecccc-----hhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392          177 ENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCG-----RALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY  250 (470)
Q Consensus       177 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~  250 (470)
                      .+++||+|+||+||+|+.. +|+.||||+++....     ...+.+.+|+++++.++||||+++++++.+++..++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            3578999999999999864 699999999864422     1245688999999999999999999999999999999999


Q ss_pred             CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392          251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM  330 (470)
Q Consensus       251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  330 (470)
                      +.++++..+. .....+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+......  .
T Consensus        82 ~~~~~~~~~~-~~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~--~  155 (299)
T d1ua2a_          82 METDLEVIIK-DNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--R  155 (299)
T ss_dssp             CSEEHHHHHT-TCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC--C
T ss_pred             hcchHHhhhh-hcccCCCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCc--c
Confidence            9887766555 44556888999999999999999999   9999999999999999999999999999998664322  2


Q ss_pred             cccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc---c------ccc
Q 040392          331 TQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS---T------MEV  400 (470)
Q Consensus       331 ~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~------~~~  400 (470)
                      .....+||+.|+|||++... .++.++|||||||++|||++|+.||....+.+ .+...........   .      ...
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~  234 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDY  234 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred             cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhccchh
Confidence            23345799999999988654 57999999999999999999999987543221 1111111100000   0      000


Q ss_pred             ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          401 VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                      ........... .......+.++.+|+.+||+.||++|||+.|+++|
T Consensus       235 ~~~~~~~~~~~-~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         235 VTFKSFPGIPL-HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCCCCCH-HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             hhhccCCCCCh-HHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            00000000000 01112346779999999999999999999999875


No 48 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=3.5e-48  Score=366.52  Aligned_cols=269  Identities=20%  Similarity=0.261  Sum_probs=202.8

Q ss_pred             CCCCCCCeecccCceEEEEEEeCCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEec
Q 040392          173 DGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLEY  250 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e~  250 (470)
                      ++|++.+.||+|+||+||+|++++|+.||||++....  ....+.+.+|+.++++++||||+++++++...+..+++||+
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            6899999999999999999999999999999996543  23356788999999999999999999999999999999999


Q ss_pred             CCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCcc
Q 040392          251 MPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM  330 (470)
Q Consensus       251 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~  330 (470)
                      +.++.+..+. .....+++..+..++.||+.||+|||   +.+|+||||||+|||++.++.+|++|||.+.......  .
T Consensus        82 ~~~~~~~~~~-~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~--~  155 (286)
T d1ob3a_          82 LDQDLKKLLD-VCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R  155 (286)
T ss_dssp             CSEEHHHHHH-TSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             ehhhhHHHHH-hhcCCcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccCc--c
Confidence            9876665555 44567999999999999999999999   8999999999999999999999999999998764322  2


Q ss_pred             cccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCC-c----ccc--ccc
Q 040392          331 TQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPI-S----TME--VVG  402 (470)
Q Consensus       331 ~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~----~~~--~~~  402 (470)
                      ......+++.|+|||.+.+. .++.++||||+||++|||++|+.||.+....+.....+.....+. .    ...  ..+
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T d1ob3a_         156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD  235 (286)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcc
Confidence            23445689999999988754 568999999999999999999999976432221111110000000 0    000  000


Q ss_pred             ccccC-chhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          403 ANLLS-QEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       403 ~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                      ..... ............+.++.+|+.+||+.||++|||+.|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00000 0000011123346778999999999999999999999864


No 49 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-47  Score=365.67  Aligned_cols=271  Identities=22%  Similarity=0.290  Sum_probs=203.7

Q ss_pred             HhhCCCCCCCeecccCceEEEEEEe-CC-CcEEEEEEeeccc--chhhhhHHHHHHHHhcC---CCCcceeEEeeec---
Q 040392          170 RATDGFSENNLIGRGGFGSVYKARL-GD-GMEVAVKVFNLQC--GRALKGFDVECEMMKSI---RHRNLIKVISTCS---  239 (470)
Q Consensus       170 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~-~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~nIv~~~~~~~---  239 (470)
                      +..++|++++.||+|+||+||+|+. ++ ++.||||+++...  ......+.+|+.+++.+   +||||+++++++.   
T Consensus         4 ~~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~   83 (305)
T d1blxa_           4 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   83 (305)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CCcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc
Confidence            3457899999999999999999986 34 5679999986543  22344566788877766   7999999999884   


Q ss_pred             --cCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeee
Q 040392          240 --NEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDF  317 (470)
Q Consensus       240 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Df  317 (470)
                        .....+++|||++++++..........+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+||
T Consensus        84 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~df  160 (305)
T d1blxa_          84 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF  160 (305)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecch
Confidence              335778999999988776666666677899999999999999999999   999999999999999999999999999


Q ss_pred             ccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcc
Q 040392          318 SIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIST  397 (470)
Q Consensus       318 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  397 (470)
                      |+++...   .........||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+............
T Consensus       161 g~~~~~~---~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~  236 (305)
T d1blxa_         161 GLARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGE  236 (305)
T ss_dssp             CSCCCCC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCG
T ss_pred             hhhhhhc---ccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCch
Confidence            9987543   2233455779999999999999999999999999999999999999997643221 11111111000000


Q ss_pred             cc------ccccccc-CchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          398 ME------VVGANLL-SQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       398 ~~------~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                      ..      ....... .............+..+.+|+.+||+.||++|||+.|+++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            00      0000000 00000011123346778999999999999999999999886


No 50 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.7e-48  Score=364.17  Aligned_cols=241  Identities=23%  Similarity=0.309  Sum_probs=197.4

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccc------hhhhhHHHHHHHHhcCC--CCcceeEEeeeccCC
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCG------RALKGFDVECEMMKSIR--HRNLIKVISTCSNEE  242 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~~  242 (470)
                      .++|++.+.||+|+||+||+|+. .+|+.||||++.....      .....+.+|+.++++++  ||||+++++++.+.+
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            35799999999999999999986 4789999999875421      12344678999999986  899999999999999


Q ss_pred             eeeEEEecCCC-CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-CCCeEEeeeccc
Q 040392          243 FKALVLEYMPH-GSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD-NMVAHLSDFSIA  320 (470)
Q Consensus       243 ~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~-~~~~kl~Dfg~a  320 (470)
                      ..++||||+.+ +++.+++.... .+++..+..++.|++.||+|||   +++|+||||||+|||++. ++.+||+|||+|
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a  158 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSG  158 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             eEEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECccccc
Confidence            99999999976 57777776544 6899999999999999999999   999999999999999985 479999999999


Q ss_pred             cccCCCCCcccccccccCccccCccccCCCCC-CCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccc
Q 040392          321 KLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTME  399 (470)
Q Consensus       321 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~-~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  399 (470)
                      +.....    ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....    .+   .....      
T Consensus       159 ~~~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----~i---~~~~~------  221 (273)
T d1xwsa_         159 ALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----EI---IRGQV------  221 (273)
T ss_dssp             EECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----HH---HHCCC------
T ss_pred             eecccc----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch----HH---hhccc------
Confidence            865322    2334679999999999887665 567899999999999999999997521    00   00000      


Q ss_pred             cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          400 VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                                    ..+..++.++.+|+.+||+.||++|||++|+++|
T Consensus       222 --------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         222 --------------FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             --------------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --------------CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence                          0012246678999999999999999999999875


No 51 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=2.3e-45  Score=349.33  Aligned_cols=262  Identities=19%  Similarity=0.215  Sum_probs=205.4

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcce-eEEeeeccCCeeeEEEe
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLI-KVISTCSNEEFKALVLE  249 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~~~~~~~~~~~~~lv~e  249 (470)
                      .++|++.+.||+|+||.||+|++ .+|+.||||++....  ....+..|+++++.++|+|++ .+.+++.+.+..++|||
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            36799999999999999999976 468999999987543  335688899999999877655 45555677788899999


Q ss_pred             cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeC---CCCCeEEeeeccccccCCC
Q 040392          250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTGE  326 (470)
Q Consensus       250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~a~~~~~~  326 (470)
                      |+ ++++.+.+......+++..+..++.|++.||+|||   +++|+||||||+||+++   .+..+||+|||+|+.+...
T Consensus        84 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~  159 (299)
T d1ckia_          84 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  159 (299)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred             Ec-CCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence            99 55777777776778999999999999999999999   99999999999999986   4557999999999977543


Q ss_pred             CCc-----ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhh--HHhhhhcCCcccc
Q 040392          327 DQS-----MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK--HWVNDWLPISTME  399 (470)
Q Consensus       327 ~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~~  399 (470)
                      ...     .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........  .+.......    
T Consensus       160 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~----  235 (299)
T d1ckia_         160 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST----  235 (299)
T ss_dssp             TTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS----
T ss_pred             ccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC----
Confidence            321     223456799999999999999999999999999999999999999987543322111  111100000    


Q ss_pred             cccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHH
Q 040392          400 VVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDS  454 (470)
Q Consensus       400 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~  454 (470)
                                 ........++.++.+++..||+.||++||++.++.+.|+.+..+
T Consensus       236 -----------~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         236 -----------PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             -----------CHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             -----------ChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence                       00111234678899999999999999999999999999887543


No 52 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=4.2e-45  Score=345.93  Aligned_cols=264  Identities=14%  Similarity=0.140  Sum_probs=213.4

Q ss_pred             hCCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCC-CcceeEEeeeccCCeeeEEEe
Q 040392          172 TDGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRH-RNLIKVISTCSNEEFKALVLE  249 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~~~~~~~~~~~~~lv~e  249 (470)
                      .++|++.+.||+|+||+||+|++. +|+.||||++...  .....+.+|++.++.++| +|++.+++++......++|||
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme   81 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   81 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccc--cCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEE
Confidence            467999999999999999999864 6899999988643  234567889999999975 899999999999999999999


Q ss_pred             cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCC-----CCCeEEeeeccccccC
Q 040392          250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDD-----NMVAHLSDFSIAKLLT  324 (470)
Q Consensus       250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~-----~~~~kl~Dfg~a~~~~  324 (470)
                      |+ +++|.+++......++..++..++.|++.||+|||   +.+|+||||||+||+++.     ++.+||+|||+|+.+.
T Consensus        82 ~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_          82 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             ec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence            99 67999999887778999999999999999999999   999999999999999974     6789999999998765


Q ss_pred             CCCCc-----ccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhh-HHh-hhhcCCcc
Q 040392          325 GEDQS-----MTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK-HWV-NDWLPIST  397 (470)
Q Consensus       325 ~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~-~~~-~~~~~~~~  397 (470)
                      .....     .......||+.|+|||.+.+..++.++||||||+++|||+||+.||........... ..+ ....... 
T Consensus       158 ~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~-  236 (293)
T d1csna_         158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP-  236 (293)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC-
T ss_pred             cCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC-
Confidence            33221     223346799999999999999999999999999999999999999986433321111 111 0000000 


Q ss_pred             cccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHHHHHHHHHHh
Q 040392          398 MEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAKLLKIRDSLL  456 (470)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~L~~i~~~~~  456 (470)
                                    .......++.++.+++..|+..+|++||+++.+.+.|+++..+..
T Consensus       237 --------------~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~~  281 (293)
T d1csna_         237 --------------LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  281 (293)
T ss_dssp             --------------HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             --------------hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHcC
Confidence                          001113457789999999999999999999999999998876543


No 53 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-45  Score=349.28  Aligned_cols=269  Identities=20%  Similarity=0.229  Sum_probs=206.7

Q ss_pred             CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeeccCCeeeEEEe
Q 040392          173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSNEEFKALVLE  249 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~~~~lv~e  249 (470)
                      ++|++++.||+|+||+||+|++ .+|+.||||+++...  ......+.+|+.+++.++||||+++++++.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            5799999999999999999986 478999999986543  3346778899999999999999999999999999999999


Q ss_pred             cCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCCCCCc
Q 040392          250 YMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS  329 (470)
Q Consensus       250 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  329 (470)
                      ++.+++|..++... ..+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||.++....... 
T Consensus        82 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~-  156 (292)
T d1unla_          82 FCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-  156 (292)
T ss_dssp             CCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS-
T ss_pred             eccccccccccccc-cccchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCCCc-
Confidence            99998888777544 46889999999999999999999   89999999999999999999999999999987643322 


Q ss_pred             ccccccccCccccCccccCCCC-CCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc------cccc--
Q 040392          330 MTQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS------TMEV--  400 (470)
Q Consensus       330 ~~~~~~~~t~~y~aPE~~~~~~-~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~--  400 (470)
                       ......++..|+|||.+.... ++.++||||+||++|||++|+.||....+....+...........      ....  
T Consensus       157 -~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (292)
T d1unla_         157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD  235 (292)
T ss_dssp             -CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred             -cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccc
Confidence             223345788899999887655 689999999999999999999997543332222221111111100      0000  


Q ss_pred             -ccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          401 -VGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       401 -~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                       ...................+.++.+|+.+||+.||.+||||+|+++|
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             00000001111111223446778999999999999999999999875


No 54 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-45  Score=357.46  Aligned_cols=269  Identities=21%  Similarity=0.222  Sum_probs=198.3

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc-chhhhhHHHHHHHHhcCCCCcceeEEeeeccCC----eee
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC-GRALKGFDVECEMMKSIRHRNLIKVISTCSNEE----FKA  245 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~----~~~  245 (470)
                      +++|++++.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|+.++||||+++++++....    ..+
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            46799999999999999999975 579999999997543 344567889999999999999999999986543    234


Q ss_pred             EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccccCC
Q 040392          246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG  325 (470)
Q Consensus       246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  325 (470)
                      ++++|+.+|+|.+++...  .+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||++.....
T Consensus        87 ~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~  161 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  161 (345)
T ss_dssp             EEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             EEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence            555667799999999764  4899999999999999999999   99999999999999999999999999999987643


Q ss_pred             CCC-cccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccccc
Q 040392          326 EDQ-SMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVVGA  403 (470)
Q Consensus       326 ~~~-~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  403 (470)
                      ... .......+||+.|+|||++.. ..++.++||||+||++|||++|+.||.......... ........... .....
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~-~~~~~~~~~~~-~~~~~  239 (345)
T d1pmea_         162 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN-HILGILGSPSQ-EDLNC  239 (345)
T ss_dssp             GGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCSCCH-HHHHT
T ss_pred             CCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHH-HHhhhccCCCh-hhhhh
Confidence            322 222345679999999998854 457899999999999999999999997643221111 11110000000 00000


Q ss_pred             c-----------c-cCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          404 N-----------L-LSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       404 ~-----------~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                      .           . ..............+.++.+|+.+||+.||++|||+.|+++|
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         240 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0           0 000000001112335678999999999999999999999987


No 55 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.7e-45  Score=351.09  Aligned_cols=271  Identities=20%  Similarity=0.244  Sum_probs=199.1

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeecc--------
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSN--------  240 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~--------  240 (470)
                      .++|++++.||+|+||+||+|+. .+|+.||||++...  .......+.+|+++++.++||||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            47899999999999999999986 47999999998644  23345668899999999999999999998754        


Q ss_pred             CCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccc
Q 040392          241 EEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIA  320 (470)
Q Consensus       241 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a  320 (470)
                      ....++||||+.++.+.... .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~-~~~~~~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~  164 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA  164 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHT-CTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             CceEEEEEeccCCCccchhh-hcccccccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeeccee
Confidence            34678999999876655444 44557899999999999999999999   999999999999999999999999999999


Q ss_pred             cccCCCCC--cccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhc--CC
Q 040392          321 KLLTGEDQ--SMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWL--PI  395 (470)
Q Consensus       321 ~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~  395 (470)
                      ........  ........||+.|+|||.+.+. .++.++||||+||++|||++|+.||....+.+ ..........  +.
T Consensus       165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~  243 (318)
T d3blha1         165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITP  243 (318)
T ss_dssp             EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCT
T ss_pred             eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHH-HHHHHHHhcCCCCh
Confidence            86643222  1222345799999999998765 68999999999999999999999997533211 1111111000  00


Q ss_pred             ccccccc-c---------cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          396 STMEVVG-A---------NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       396 ~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                      ......+ .         ................+.++.+|+.+||+.||++|||++|+++|
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence            0000000 0         00000011111222335678899999999999999999999975


No 56 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.9e-45  Score=353.39  Aligned_cols=266  Identities=25%  Similarity=0.323  Sum_probs=196.0

Q ss_pred             CCCCCCeecccCceEEEEEEeC-CCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeecc------CCeeeE
Q 040392          174 GFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCSN------EEFKAL  246 (470)
Q Consensus       174 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~------~~~~~l  246 (470)
                      +|+..+.||+|+||+||+|++. +|+.||||++.....    ...+|++++++++||||+++++++..      ..+.++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            5788899999999999999864 699999999875422    23469999999999999999998843      345789


Q ss_pred             EEecCCCCChHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC-CeEEeeecccccc
Q 040392          247 VLEYMPHGSLEKYMY--SSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM-VAHLSDFSIAKLL  323 (470)
Q Consensus       247 v~e~~~~g~L~~~l~--~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~-~~kl~Dfg~a~~~  323 (470)
                      ||||++++.+..+..  .....+++..+..++.|++.||+|||   +++|+||||||+|||++.++ .+||+|||++...
T Consensus        97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEEC
T ss_pred             EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhhc
Confidence            999998764433322  34457899999999999999999999   99999999999999999775 8999999999876


Q ss_pred             CCCCCcccccccccCccccCccccCC-CCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHH-----------hhh
Q 040392          324 TGEDQSMTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHW-----------VND  391 (470)
Q Consensus       324 ~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~-----------~~~  391 (470)
                      ....   ......||..|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .+...           ...
T Consensus       174 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~  249 (350)
T d1q5ka_         174 VRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIRE  249 (350)
T ss_dssp             CTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHH
T ss_pred             cCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHH-HHHHHHHHhCCChHHhhhh
Confidence            4332   2234579999999998765 568999999999999999999999997643221 11111           111


Q ss_pred             hcCCcccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH--HHHHH
Q 040392          392 WLPISTMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK--LLKIR  452 (470)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~--L~~i~  452 (470)
                      ..+... ...-+..... ..........+.++.+|+.+||+.||++|||+.|+++|  ++++.
T Consensus       250 ~~~~~~-~~~~~~~~~~-~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         250 MNPNYT-EFKFPQIKAH-PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             HCC----CCCCCCCCCC-CGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             hccchh-hccccccccC-chhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence            111000 0000000000 00011112346678999999999999999999999975  55554


No 57 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-45  Score=351.18  Aligned_cols=253  Identities=24%  Similarity=0.318  Sum_probs=203.2

Q ss_pred             CCCCCCCeecccCceEEEEEEe----CCCcEEEEEEeecc----cchhhhhHHHHHHHHhcCCC-CcceeEEeeeccCCe
Q 040392          173 DGFSENNLIGRGGFGSVYKARL----GDGMEVAVKVFNLQ----CGRALKGFDVECEMMKSIRH-RNLIKVISTCSNEEF  243 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h-~nIv~~~~~~~~~~~  243 (470)
                      ++|++.+.||+|+||+||+|+.    .+|+.||||+++..    .....+.+.+|++++++++| |||+++++++.+...
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            6799999999999999999974    24889999998643    22345667889999999977 899999999999999


Q ss_pred             eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392          244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL  323 (470)
Q Consensus       244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~  323 (470)
                      .+++|||+.+|+|.+++...+ .+++.....++.|++.||+|||   +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             eeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccchhhh
Confidence            999999999999999997665 4678888999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCCcccccccccCccccCccccCCC--CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCcccccc
Q 040392          324 TGEDQSMTQTQTLATIGYMAPEYGREG--RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPISTMEVV  401 (470)
Q Consensus       324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  401 (470)
                      .... ........|++.|+|||.+.+.  .++.++||||+||++|||++|+.||............+ .......     
T Consensus       180 ~~~~-~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~-~~~~~~~-----  252 (322)
T d1vzoa_         180 VADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS-RRILKSE-----  252 (322)
T ss_dssp             CGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH-HHHHHCC-----
T ss_pred             cccc-cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HhcccCC-----
Confidence            4322 2223446799999999988754  46889999999999999999999998754433221111 1111000     


Q ss_pred             cccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCC-----HHHHHHH
Q 040392          402 GANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRIN-----AREIVAK  447 (470)
Q Consensus       402 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~el~~~  447 (470)
                                 ...+..++.++.+++.+||++||++|||     ++|+++|
T Consensus       253 -----------~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         253 -----------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             -----------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             -----------CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence                       0012235778999999999999999994     8899874


No 58 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.1e-45  Score=354.80  Aligned_cols=269  Identities=25%  Similarity=0.279  Sum_probs=197.7

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecc--cchhhhhHHHHHHHHhcCCCCcceeEEeeeccCC------
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQ--CGRALKGFDVECEMMKSIRHRNLIKVISTCSNEE------  242 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~~~------  242 (470)
                      .++|++++.||+|+||+||+|.. .+|+.||||+++..  .....+.+.+|+++|+.++||||+++++++...+      
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            56899999999999999999986 46999999999754  2334567888999999999999999999987654      


Q ss_pred             eeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeeccccc
Q 040392          243 FKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKL  322 (470)
Q Consensus       243 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~  322 (470)
                      ..++||||+ +++|..+....  .+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+|++|||+|+.
T Consensus        97 ~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~  170 (346)
T d1cm8a_          97 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ  170 (346)
T ss_dssp             CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEecc-cccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhcccccccccccccceec
Confidence            568999999 56788777543  5899999999999999999999   99999999999999999999999999999987


Q ss_pred             cCCCCCcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc--ccc
Q 040392          323 LTGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS--TME  399 (470)
Q Consensus       323 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~  399 (470)
                      ....     .....+|+.|+|||.+.+. .++.++||||+||++|||++|+.||...... ..+...........  ...
T Consensus       171 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~  244 (346)
T d1cm8a_         171 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQ  244 (346)
T ss_dssp             CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHH
T ss_pred             cCCc-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH-HHHHHHHhccCCCcHHHHh
Confidence            6432     2346799999999988664 5789999999999999999999999764321 11111111110000  000


Q ss_pred             ccc--------ccccCchh-hhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH--HHHHH
Q 040392          400 VVG--------ANLLSQED-IHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK--LLKIR  452 (470)
Q Consensus       400 ~~~--------~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~--L~~i~  452 (470)
                      ...        ..+..... .........+.++.+|+.+||..||++|||+.|+++|  ++++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         245 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             TCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            000        00000000 0000112345678899999999999999999999987  66554


No 59 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=1.2e-44  Score=349.01  Aligned_cols=262  Identities=20%  Similarity=0.287  Sum_probs=199.0

Q ss_pred             CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CCcceeEEeeecc--CCeeeEEE
Q 040392          173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRNLIKVISTCSN--EEFKALVL  248 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~--~~~~~lv~  248 (470)
                      ++|++++.||+|+||+||+|+. .+|+.||||+++..   ..+.+.+|+++|+.++ ||||+++++++..  ....++||
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~  111 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  111 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEE
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEE
Confidence            6799999999999999999986 56899999998643   3456788999999995 9999999999864  45689999


Q ss_pred             ecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCC-CeEEeeeccccccCCCC
Q 040392          249 EYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNM-VAHLSDFSIAKLLTGED  327 (470)
Q Consensus       249 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~~~  327 (470)
                      ||+++++|.++.    ..+++..+..++.||+.||+|||   +++|+||||||+|||++.++ .+||+|||+|.......
T Consensus       112 e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~  184 (328)
T d3bqca1         112 EHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  184 (328)
T ss_dssp             ECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred             eecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccCCC
Confidence            999999997765    35899999999999999999999   99999999999999998655 69999999998764332


Q ss_pred             CcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhh------------HHhhhhcC
Q 040392          328 QSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLK------------HWVNDWLP  394 (470)
Q Consensus       328 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~------------~~~~~~~~  394 (470)
                         ......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||....+......            .|......
T Consensus       185 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~  261 (328)
T d3bqca1         185 ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI  261 (328)
T ss_dssp             ---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred             ---cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence               23446789999999997765 479999999999999999999999976433211110            11110000


Q ss_pred             Cc---ccccccc--cccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          395 IS---TMEVVGA--NLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       395 ~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                      ..   .......  ...............++.++.+|+.+||..||++|||++|+++|
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            00   0000000  00000011111223456789999999999999999999999874


No 60 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-44  Score=351.44  Aligned_cols=261  Identities=22%  Similarity=0.225  Sum_probs=191.2

Q ss_pred             CCCCCCCeecccCceEEEEEEeC-CCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeec------cCCe
Q 040392          173 DGFSENNLIGRGGFGSVYKARLG-DGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCS------NEEF  243 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~------~~~~  243 (470)
                      ++|++++.||+|+||+||+|.+. +|+.||||++....  ....+.+.+|+.+++.++||||+++++++.      ...+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            67999999999999999999865 69999999997542  334556889999999999999999999985      3468


Q ss_pred             eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392          244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL  323 (470)
Q Consensus       244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~  323 (470)
                      .|+||||+.++.+ +.+.   ..+++..+..++.|++.||.|||   +.||+||||||+|||++.++.+|++|||+++..
T Consensus        97 ~~iv~Ey~~~~l~-~~~~---~~~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~  169 (355)
T d2b1pa1          97 VYLVMELMDANLC-QVIQ---MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_dssp             EEEEEECCSEEHH-HHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             eEEEEeccchHHH-Hhhh---cCCCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhhhhcc
Confidence            8999999976544 4443   35789999999999999999999   999999999999999999999999999998765


Q ss_pred             CCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHh--------------
Q 040392          324 TGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWV--------------  389 (470)
Q Consensus       324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~--------------  389 (470)
                      ..   ........+|+.|+|||++.+..+++++||||+||++|||++|+.||....... ......              
T Consensus       170 ~~---~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~-~~~~i~~~~~~~~~~~~~~~  245 (355)
T d2b1pa1         170 GT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKL  245 (355)
T ss_dssp             --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHTTS
T ss_pred             cc---ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHH-HHHHHHHhccCCCHHHHHHh
Confidence            32   233345678999999999999999999999999999999999999997532211 111100              


Q ss_pred             --------hhhcCCc---ccccccccccCchhhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          390 --------NDWLPIS---TMEVVGANLLSQEDIHFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       390 --------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                              .......   ...........   .........+.++.+|+.+||..||++||||+|+++|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         246 QPTVRNYVENRPKYAGLTFPKLFPDSLFP---ADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHSCGGGSC---CSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhHHHHhhcCcccccccccccccccccc---ccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence                    0000000   00000000001   1111233457789999999999999999999999976


No 61 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.2e-44  Score=348.16  Aligned_cols=265  Identities=22%  Similarity=0.244  Sum_probs=196.2

Q ss_pred             hCCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeeccc--chhhhhHHHHHHHHhcCCCCcceeEEeeecc-----CCe
Q 040392          172 TDGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQC--GRALKGFDVECEMMKSIRHRNLIKVISTCSN-----EEF  243 (470)
Q Consensus       172 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~~-----~~~  243 (470)
                      +++|++.+.||+|+||+||+|+. .+|+.||||++....  ....+.+.+|+++++.++||||+++++++..     ...
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            57899999999999999999985 579999999997542  3345567889999999999999999998853     234


Q ss_pred             eeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeecccccc
Q 040392          244 KALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAKLL  323 (470)
Q Consensus       244 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~~~  323 (470)
                      .+++++|+.+|+|.+++...  .+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+|++|||++...
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~  171 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT  171 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CC
T ss_pred             eEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccchhccc
Confidence            46677888899999999654  5899999999999999999999   999999999999999999999999999998754


Q ss_pred             CCCCCcccccccccCccccCccccCCC-CCCCccchhhHHHHHHHHHhCCCCCCccccCcchhhHHhhhhcCCc--ccc-
Q 040392          324 TGEDQSMTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTGKKPTNEIFNGEMTLKHWVNDWLPIS--TME-  399 (470)
Q Consensus       324 ~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~-  399 (470)
                      .     .......|++.|+|||...+. .++.++||||+||++|+|++|+.||........ ............  ... 
T Consensus       172 ~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~-~~~i~~~~~~~~~~~~~~  245 (348)
T d2gfsa1         172 D-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLVGTPGAELLKK  245 (348)
T ss_dssp             T-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHTT
T ss_pred             C-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChHHhhh
Confidence            2     233446789999999986665 468999999999999999999999975322111 111111000000  000 


Q ss_pred             -------cccccccCchhh-hhHhhhhhHHHHHHHHhhccCCCccCCCCHHHHHHH
Q 040392          400 -------VVGANLLSQEDI-HFVAKEQCVSCVFNLAMECTVESPEQRINAREIVAK  447 (470)
Q Consensus       400 -------~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~el~~~  447 (470)
                             ............ ........+.++.+|+.+||..||++|||+.|+++|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         246 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             CCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence                   000000000000 001112346778999999999999999999999985


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=3.5e-39  Score=315.07  Aligned_cols=267  Identities=15%  Similarity=0.176  Sum_probs=188.1

Q ss_pred             CCCCCCCeecccCceEEEEEEe-CCCcEEEEEEeecccchhhhhHHHHHHHHhcCC-----------CCcceeEEeeecc
Q 040392          173 DGFSENNLIGRGGFGSVYKARL-GDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-----------HRNLIKVISTCSN  240 (470)
Q Consensus       173 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv~~~~~~~~  240 (470)
                      ++|++++.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++++.+.           |+||+++++++..
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            3599999999999999999986 579999999997542 23456677888888775           5789999888754


Q ss_pred             --CCeeeEEEecCCCCCh--HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCC-----
Q 040392          241 --EEFKALVLEYMPHGSL--EKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMV-----  311 (470)
Q Consensus       241 --~~~~~lv~e~~~~g~L--~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~-----  311 (470)
                        ....+++++++..+..  ..........+++..+..++.|++.||+|||+  ..+|+||||||+|||++.++.     
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~  169 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLI  169 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccc
Confidence              3455666666655443  22223344678899999999999999999992  389999999999999986653     


Q ss_pred             -eEEeeeccccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHHHHHHhCCCCCCccccCc-----chh
Q 040392          312 -AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTGKKPTNEIFNGE-----MTL  385 (470)
Q Consensus       312 -~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l~el~tg~~p~~~~~~~~-----~~~  385 (470)
                       ++++|||.+.....     ......||+.|+|||++.+..++.++||||+||+++||++|+.||.......     ..+
T Consensus       170 ~~kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~  244 (362)
T d1q8ya_         170 QIKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  244 (362)
T ss_dssp             EEEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             eeeEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHH
Confidence             99999999875532     2234679999999999999999999999999999999999999997532211     011


Q ss_pred             hHHhhhh-----------------cCCc-ccccccccccCch----hhhhHhhhhhHHHHHHHHhhccCCCccCCCCHHH
Q 040392          386 KHWVNDW-----------------LPIS-TMEVVGANLLSQE----DIHFVAKEQCVSCVFNLAMECTVESPEQRINARE  443 (470)
Q Consensus       386 ~~~~~~~-----------------~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e  443 (470)
                      ...+...                 .... .............    ..........+.++.+|+.+||..||++|||++|
T Consensus       245 ~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e  324 (362)
T d1q8ya_         245 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  324 (362)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHH
Confidence            1111000                 0000 0000000000000    0111122345778999999999999999999999


Q ss_pred             HHHH
Q 040392          444 IVAK  447 (470)
Q Consensus       444 l~~~  447 (470)
                      +++|
T Consensus       325 ~L~H  328 (362)
T d1q8ya_         325 LVNH  328 (362)
T ss_dssp             HHTC
T ss_pred             HhcC
Confidence            9876


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.89  E-value=3.6e-24  Score=188.31  Aligned_cols=168  Identities=16%  Similarity=0.139  Sum_probs=119.0

Q ss_pred             CCCeecccCceEEEEEEeCCCcEEEEEEeecccc------------------hhhhhHHHHHHHHhcCCCCcceeEEeee
Q 040392          177 ENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCG------------------RALKGFDVECEMMKSIRHRNLIKVISTC  238 (470)
Q Consensus       177 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~nIv~~~~~~  238 (470)
                      +.+.||+|+||+||+|...+|+.||||+++....                  ........|...+.++.|.+++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            4678999999999999988999999998753210                  0112344588899999999999888764


Q ss_pred             ccCCeeeEEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecCCCCCCeeeCCCCCeEEeeec
Q 040392          239 SNEEFKALVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGYSAPIIHCDLKPSNVLLDDNMVAHLSDFS  318 (470)
Q Consensus       239 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg  318 (470)
                      .    .+++|||++++.+.+        ++......++.|+++++.|||   +.+|+||||||+|||++++ .++|+|||
T Consensus        84 ~----~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~liDFG  147 (191)
T d1zara2          84 G----NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIWIIDFP  147 (191)
T ss_dssp             T----TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEEECCCT
T ss_pred             C----CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-CEEEEECC
Confidence            2    369999998866543        233445679999999999999   8999999999999999965 48999999


Q ss_pred             cccccCCCCCcccccccccCccccCccccCCCCCCCccchhhHHHHH
Q 040392          319 IAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML  365 (470)
Q Consensus       319 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslGv~l  365 (470)
                      .|.....+.........+..    -.+ .....|+.++|+||+.--+
T Consensus       148 ~a~~~~~~~~~~~l~rd~~~----~~~-~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         148 QSVEVGEEGWREILERDVRN----IIT-YFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             TCEETTSTTHHHHHHHHHHH----HHH-HHHHHHCCCCCHHHHHHHH
T ss_pred             CcccCCCCCcHHHHHHHHHH----HHH-HHcCCCCCcccHHHHHHHH
Confidence            99765322111000000000    001 1134678899999965443


No 64 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.41  E-value=1.1e-13  Score=130.15  Aligned_cols=100  Identities=39%  Similarity=0.698  Sum_probs=92.8

Q ss_pred             CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392            2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR   81 (470)
Q Consensus         2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~   81 (470)
                      +|..++.+++|+.+++++|.+++.+ +.+..+++|+.|+|++|+|+|.+|..+..+++|+.|||++|+|+|.+|..+.++
T Consensus       213 ~~~~~~~~~~l~~l~~~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~  291 (313)
T d1ogqa_         213 ASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQ  291 (313)
T ss_dssp             CGGGCCTTSCCSEEECCSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGG
T ss_pred             ccccccccccccccccccccccccc-cccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCC
Confidence            5778889999999999999999764 578899999999999999999999999999999999999999999999888999


Q ss_pred             CCccccccCCccccCCCCCCCCCC
Q 040392           82 NFSVESFEGNELLCGSPNLQVPPC  105 (470)
Q Consensus        82 ~l~~l~~~~n~~~~~~~~~~~~~~  105 (470)
                      +|+.+++.+|+.+|+.|   .|+|
T Consensus       292 ~L~~l~l~~N~~l~g~p---lp~c  312 (313)
T d1ogqa_         292 RFDVSAYANNKCLCGSP---LPAC  312 (313)
T ss_dssp             GSCGGGTCSSSEEESTT---SSCC
T ss_pred             CCCHHHhCCCccccCCC---CCCC
Confidence            99999999999999988   5677


No 65 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37  E-value=5.5e-13  Score=111.59  Aligned_cols=94  Identities=26%  Similarity=0.266  Sum_probs=84.2

Q ss_pred             CCcccCCCCCCcEeeCcCC-cCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCC
Q 040392            2 IPTEIGGLKNLEYLFLGYN-RLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPF   80 (470)
Q Consensus         2 ~p~~~~~l~~l~~l~l~~n-~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l   80 (470)
                      +|..+..+++|+.|++++| .|+...+.+|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|+|+..++.....
T Consensus        23 ~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~  102 (156)
T d2ifga3          23 SLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG  102 (156)
T ss_dssp             TTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred             CcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhcc
Confidence            5778889999999999876 588666678999999999999999999777888999999999999999999888877666


Q ss_pred             CCCccccccCCcccc
Q 040392           81 RNFSVESFEGNELLC   95 (470)
Q Consensus        81 ~~l~~l~~~~n~~~~   95 (470)
                      .+|+.|++++|++.|
T Consensus       103 ~~l~~L~L~~Np~~C  117 (156)
T d2ifga3         103 LSLQELVLSGNPLHC  117 (156)
T ss_dssp             CCCCEEECCSSCCCC
T ss_pred             ccccccccCCCcccC
Confidence            689999999999977


No 66 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.33  E-value=1e-12  Score=114.19  Aligned_cols=92  Identities=27%  Similarity=0.346  Sum_probs=54.5

Q ss_pred             CCcccCCCCCCcEeeCcCCcCCCC-CCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CC
Q 040392            2 IPTEIGGLKNLEYLFLGYNRLQGP-IPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GP   79 (470)
Q Consensus         2 ~p~~~~~l~~l~~l~l~~n~l~~~-~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~   79 (470)
                      +|.++.  +++++|+|++|+|++. .+..|.++++|+.|+|++|.+++..+..+..+++|+.|++++|+|+..++.. ..
T Consensus        23 iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~  100 (192)
T d1w8aa_          23 IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLG  100 (192)
T ss_dssp             CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTT
T ss_pred             cCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhC
Confidence            444443  4566666666666542 2344566666666666666666555566666666666666666666555543 45


Q ss_pred             CCCCccccccCCcccc
Q 040392           80 FRNFSVESFEGNELLC   95 (470)
Q Consensus        80 l~~l~~l~~~~n~~~~   95 (470)
                      +++|+.|++++|.+..
T Consensus       101 l~~L~~L~L~~N~l~~  116 (192)
T d1w8aa_         101 LHQLKTLNLYDNQISC  116 (192)
T ss_dssp             CTTCCEEECCSSCCCE
T ss_pred             CCcccccccCCccccc
Confidence            6666666666666543


No 67 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.31  E-value=2.5e-12  Score=102.96  Aligned_cols=88  Identities=25%  Similarity=0.321  Sum_probs=77.2

Q ss_pred             ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC--CCCCCCC
Q 040392            5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP--RGGPFRN   82 (470)
Q Consensus         5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~--~~~~l~~   82 (470)
                      .++++++|++|+|++|+|+ .+|+.+..+++|+.|++++|+|+ .+| .+..+++|+.|++++|+|+....  .+..+++
T Consensus        15 ~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~~~~   91 (124)
T d1dcea3          15 HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR   91 (124)
T ss_dssp             CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT
T ss_pred             ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCccCCCCCchhhcCCCC
Confidence            5889999999999999999 67888999999999999999999 565 48999999999999999985443  3577889


Q ss_pred             CccccccCCcccc
Q 040392           83 FSVESFEGNELLC   95 (470)
Q Consensus        83 l~~l~~~~n~~~~   95 (470)
                      |+.+++++|++..
T Consensus        92 L~~L~l~~N~i~~  104 (124)
T d1dcea3          92 LVLLNLQGNSLCQ  104 (124)
T ss_dssp             CCEEECTTSGGGG
T ss_pred             CCEEECCCCcCCc
Confidence            9999999999854


No 68 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.19  E-value=2e-11  Score=105.85  Aligned_cols=94  Identities=23%  Similarity=0.313  Sum_probs=85.9

Q ss_pred             CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCC
Q 040392            3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFR   81 (470)
Q Consensus         3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~   81 (470)
                      +..|.++++|+.|+|++|.+....+..+..+++|+.|+|++|+|+...|..|.++++|+.|+|++|.|++.++.. ..++
T Consensus        47 ~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~  126 (192)
T d1w8aa_          47 DGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLN  126 (192)
T ss_dssp             SCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCT
T ss_pred             ccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCc
Confidence            456788999999999999999888899999999999999999999777788999999999999999999887765 6789


Q ss_pred             CCccccccCCccccC
Q 040392           82 NFSVESFEGNELLCG   96 (470)
Q Consensus        82 ~l~~l~~~~n~~~~~   96 (470)
                      +|+.+++.+|++.|.
T Consensus       127 ~L~~l~L~~N~~~~~  141 (192)
T d1w8aa_         127 SLTSLNLASNPFNCN  141 (192)
T ss_dssp             TCCEEECTTCCBCCS
T ss_pred             ccccccccccccccc
Confidence            999999999999774


No 69 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.16  E-value=2.1e-11  Score=97.51  Aligned_cols=79  Identities=28%  Similarity=0.318  Sum_probs=71.1

Q ss_pred             cEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCccccccCCc
Q 040392           13 EYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFEGNE   92 (470)
Q Consensus        13 ~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~   92 (470)
                      +.|+|++|+|+ .+| .+..+++|++|++++|+|+ .+|+.+..+++|+.|++++|.|++ ++.+..+++|+.+++++|+
T Consensus         1 R~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~-l~~~~~l~~L~~L~l~~N~   76 (124)
T d1dcea3           1 RVLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNR   76 (124)
T ss_dssp             SEEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSC
T ss_pred             CEEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc-cCccccccccCeEECCCCc
Confidence            57999999999 554 5899999999999999999 788889999999999999999995 4668899999999999999


Q ss_pred             ccc
Q 040392           93 LLC   95 (470)
Q Consensus        93 ~~~   95 (470)
                      +..
T Consensus        77 i~~   79 (124)
T d1dcea3          77 LQQ   79 (124)
T ss_dssp             CCS
T ss_pred             cCC
Confidence            853


No 70 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12  E-value=8.7e-11  Score=107.24  Aligned_cols=91  Identities=29%  Similarity=0.272  Sum_probs=71.5

Q ss_pred             ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCc
Q 040392            5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFS   84 (470)
Q Consensus         5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~   84 (470)
                      .+..+.+++.|++++|.++...+..+..+++|+.|++++|+|++..+..|..+++|+.|+|++|+|+..++.+..+++|+
T Consensus       119 ~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L~  198 (266)
T d1p9ag_         119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLP  198 (266)
T ss_dssp             TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCS
T ss_pred             ccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCcccChhHCCCCCCC
Confidence            44566777777777777775555666778888888888888887666778888888888888888886666777888888


Q ss_pred             cccccCCcccc
Q 040392           85 VESFEGNELLC   95 (470)
Q Consensus        85 ~l~~~~n~~~~   95 (470)
                      .|++++|++.|
T Consensus       199 ~L~L~~Np~~C  209 (266)
T d1p9ag_         199 FAFLHGNPWLC  209 (266)
T ss_dssp             EEECCSCCBCC
T ss_pred             EEEecCCCCCC
Confidence            88888888877


No 71 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.08  E-value=2.2e-11  Score=114.08  Aligned_cols=97  Identities=35%  Similarity=0.680  Sum_probs=72.6

Q ss_pred             CCcccCCCCCCcEeeCcC-CcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCC-CCCC
Q 040392            2 IPTEIGGLKNLEYLFLGY-NRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIP-RGGP   79 (470)
Q Consensus         2 ~p~~~~~l~~l~~l~l~~-n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~-~~~~   79 (470)
                      +|++|++|++|++|+|++ |+++|.+|+.|++|++|++|+|++|+|++..+..+..+..|+.+++++|.+.+.+| .+..
T Consensus        68 lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~  147 (313)
T d1ogqa_          68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISS  147 (313)
T ss_dssp             CCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred             CChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhcc
Confidence            577778888888888875 77777778788888888888888888877777777777888888888887766554 3467


Q ss_pred             CCCCccccccCCccccCCC
Q 040392           80 FRNFSVESFEGNELLCGSP   98 (470)
Q Consensus        80 l~~l~~l~~~~n~~~~~~~   98 (470)
                      +++++.+++++|.+....|
T Consensus       148 l~~L~~l~l~~n~l~~~ip  166 (313)
T d1ogqa_         148 LPNLVGITFDGNRISGAIP  166 (313)
T ss_dssp             CTTCCEEECCSSCCEEECC
T ss_pred             Ccccceeeccccccccccc
Confidence            7777778887777654444


No 72 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.08  E-value=4.1e-11  Score=100.56  Aligned_cols=87  Identities=14%  Similarity=0.094  Sum_probs=66.1

Q ss_pred             ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCCCC
Q 040392            5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFRNF   83 (470)
Q Consensus         5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~~l   83 (470)
                      .+.++.+|+.|+|++|+|+ .+|..+..+++|+.|+|++|.|+ .++ .+..+++|+.|++++|.|+..++.. ..+++|
T Consensus        13 ~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L   89 (162)
T d1a9na_          13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL   89 (162)
T ss_dssp             EEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred             hccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence            3556777888888888888 55666677888888888888888 553 4778888888888888888666554 457888


Q ss_pred             ccccccCCccc
Q 040392           84 SVESFEGNELL   94 (470)
Q Consensus        84 ~~l~~~~n~~~   94 (470)
                      +.|++++|++.
T Consensus        90 ~~L~L~~N~i~  100 (162)
T d1a9na_          90 TELILTNNSLV  100 (162)
T ss_dssp             CEEECCSCCCC
T ss_pred             ccceecccccc
Confidence            88888888764


No 73 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04  E-value=8.4e-11  Score=108.43  Aligned_cols=92  Identities=28%  Similarity=0.346  Sum_probs=63.4

Q ss_pred             cccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCC
Q 040392            4 TEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRN   82 (470)
Q Consensus         4 ~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~   82 (470)
                      ..|.++++|+.|+|++|+|++..|..|.++++|+.+++++|++++..|..|..+++|+.||+++|.+.+.++. +..+++
T Consensus       147 ~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~  226 (284)
T d1ozna_         147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA  226 (284)
T ss_dssp             TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred             hHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccc
Confidence            4456667777777777777766666667777777777777777766667777777777777777777655543 256667


Q ss_pred             CccccccCCcccc
Q 040392           83 FSVESFEGNELLC   95 (470)
Q Consensus        83 l~~l~~~~n~~~~   95 (470)
                      |+.+++++|++.|
T Consensus       227 L~~L~l~~N~l~C  239 (284)
T d1ozna_         227 LQYLRLNDNPWVC  239 (284)
T ss_dssp             CCEEECCSSCEEC
T ss_pred             cCEEEecCCCCCC
Confidence            7777777777766


No 74 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.03  E-value=8.1e-11  Score=98.73  Aligned_cols=91  Identities=20%  Similarity=0.140  Sum_probs=76.7

Q ss_pred             CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccC--CCCCC
Q 040392            2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEI--PRGGP   79 (470)
Q Consensus         2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~--~~~~~   79 (470)
                      +|+.+..+++|+.|+|++|+|+ .+ +.|..+++|++|+|++|+|++..+..+..+++|+.|++++|+|+...  ..+..
T Consensus        33 i~~~~~~l~~L~~L~Ls~N~i~-~l-~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~L~~N~i~~~~~l~~l~~  110 (162)
T d1a9na_          33 IENLGATLDQFDAIDFSDNEIR-KL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLAS  110 (162)
T ss_dssp             CCCGGGGTTCCSEEECCSSCCC-EE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGG
T ss_pred             cCccccccccCCEEECCCCCCC-cc-CCcccCcchhhhhcccccccCCCccccccccccccceecccccccccccccccc
Confidence            4555677899999999999999 44 45889999999999999999555555678999999999999998533  34577


Q ss_pred             CCCCccccccCCccc
Q 040392           80 FRNFSVESFEGNELL   94 (470)
Q Consensus        80 l~~l~~l~~~~n~~~   94 (470)
                      +++|+.+++++|++.
T Consensus       111 l~~L~~L~l~~N~i~  125 (162)
T d1a9na_         111 LKSLTYLCILRNPVT  125 (162)
T ss_dssp             CTTCCEEECCSSGGG
T ss_pred             ccccchhhcCCCccc
Confidence            899999999999984


No 75 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.96  E-value=3.4e-10  Score=103.21  Aligned_cols=89  Identities=25%  Similarity=0.257  Sum_probs=73.2

Q ss_pred             CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392            2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR   81 (470)
Q Consensus         2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~   81 (470)
                      +|.+|.  ++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+ .+|. +..+++|+.|++++|++++.++....++
T Consensus        25 iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~  100 (266)
T d1p9ag_          25 LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQV-DGTLPVLGTLDLSHNQLQSLPLLGQTLP  100 (266)
T ss_dssp             CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEEC-CSCCTTCCEEECCSSCCSSCCCCTTTCT
T ss_pred             eCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-cccc-cccccccccccccccccccccccccccc
Confidence            566554  57889999999998666677889999999999999998 5553 5788999999999999987777778888


Q ss_pred             CCccccccCCccc
Q 040392           82 NFSVESFEGNELL   94 (470)
Q Consensus        82 ~l~~l~~~~n~~~   94 (470)
                      +|+.+++++|.+.
T Consensus       101 ~L~~L~l~~~~~~  113 (266)
T d1p9ag_         101 ALTVLDVSFNRLT  113 (266)
T ss_dssp             TCCEEECCSSCCC
T ss_pred             ccccccccccccc
Confidence            9999999888764


No 76 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.92  E-value=8.4e-10  Score=102.57  Aligned_cols=92  Identities=24%  Similarity=0.305  Sum_probs=59.1

Q ss_pred             CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-----
Q 040392            3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-----   77 (470)
Q Consensus         3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-----   77 (470)
                      +..|.+++.++.|++++|.+++..|..+.++++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|+......     
T Consensus       188 ~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~i~~~~f~~~~  266 (305)
T d1xkua_         188 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG  266 (305)
T ss_dssp             TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSS
T ss_pred             hhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCccChhhccCcc
Confidence            445666667777777777777665666666777777777777776 55666777777777777777776432221     


Q ss_pred             --CCCCCCccccccCCcccc
Q 040392           78 --GPFRNFSVESFEGNELLC   95 (470)
Q Consensus        78 --~~l~~l~~l~~~~n~~~~   95 (470)
                        ..+.+|+.+++.+|++.+
T Consensus       267 ~~~~~~~L~~L~L~~N~~~~  286 (305)
T d1xkua_         267 YNTKKASYSGVSLFSNPVQY  286 (305)
T ss_dssp             CCTTSCCCSEEECCSSSSCG
T ss_pred             hhcccCCCCEEECCCCcCcc
Confidence              234566666777776643


No 77 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.78  E-value=1.1e-09  Score=90.91  Aligned_cols=96  Identities=24%  Similarity=0.205  Sum_probs=69.7

Q ss_pred             CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCcccccc--CCCCCCC
Q 040392            3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGE--IPRGGPF   80 (470)
Q Consensus         3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~--~~~~~~l   80 (470)
                      ++.|.++++|+.|+|++|+|+.+.|..|..+++|++|+|++|+|+ .+|.......+|+.|+|++|.+.-.  ...+..+
T Consensus        49 ~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~~C~C~~~~l~~~  127 (156)
T d2ifga3          49 LRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRW  127 (156)
T ss_dssp             GGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHHH
T ss_pred             chhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhccccccccccCCCcccCCchHHHHHHH
Confidence            456899999999999999999877888999999999999999999 5655544555799999999998521  1111111


Q ss_pred             CCCccccccCCccccCCCC
Q 040392           81 RNFSVESFEGNELLCGSPN   99 (470)
Q Consensus        81 ~~l~~l~~~~n~~~~~~~~   99 (470)
                      .......+..+.+.|..|.
T Consensus       128 ~~~~~~~~~~~~~~C~~p~  146 (156)
T d2ifga3         128 EEEGLGGVPEQKLQCHGQG  146 (156)
T ss_dssp             HHTTCSSCGGGCCCCSSSS
T ss_pred             HHhccCccCcCCcEECcCh
Confidence            1112223344667776663


No 78 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.77  E-value=2e-08  Score=90.76  Aligned_cols=148  Identities=16%  Similarity=0.103  Sum_probs=104.7

Q ss_pred             HHHHhhCCCCCCCeecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCC-CCcceeEEeeeccCCeee
Q 040392          167 ELCRATDGFSENNLIGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR-HRNLIKVISTCSNEEFKA  245 (470)
Q Consensus       167 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~~~~~~~~~~~  245 (470)
                      ++......|+..+..+-++.+.||+... ++..+++|+...........+..|...+..+. +-.+.+++.+...++..+
T Consensus         8 ~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_           8 ELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            4555566777666555555678999865 56778889886655555666788999888774 444678888888888899


Q ss_pred             EEEecCCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------
Q 040392          246 LVLEYMPHGSLEKYMYSSNYILDIFQRLNIMIDVASALEYLHFGY-----------------------------------  290 (470)
Q Consensus       246 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~-----------------------------------  290 (470)
                      +||++++|.++.+.....      .....++.++++.+..||+..                                   
T Consensus        87 lv~~~l~G~~~~~~~~~~------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T d1j7la_          87 LLMSEADGVLCSEEYEDE------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEEECCSSEEHHHHTTTC------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGST
T ss_pred             EEEEeccccccccccccc------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccc
Confidence            999999998886554221      122334555666666666310                                   


Q ss_pred             ---------------------CCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392          291 ---------------------SAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK  321 (470)
Q Consensus       291 ---------------------~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~  321 (470)
                                           ...++|+|+.|.||++++++.+.|+||+.+.
T Consensus       161 ~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             TCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred             cccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence                                 1237999999999999987777899998875


No 79 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.74  E-value=4e-11  Score=104.23  Aligned_cols=88  Identities=23%  Similarity=0.314  Sum_probs=66.3

Q ss_pred             CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCC
Q 040392            2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFR   81 (470)
Q Consensus         2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~   81 (470)
                      +|.+|..|++|+.|+|++|+|+ .++ .+.++++|+.|+|++|.|+ .+|..+..+++|+.|++++|.|+. ++.+..++
T Consensus        40 l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~~~~~l~  115 (198)
T d1m9la_          40 MDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LSGIEKLV  115 (198)
T ss_dssp             CHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HHHHHHHH
T ss_pred             hhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cccccccc
Confidence            3456778889999999999998 443 5888899999999999988 666655556678888888887774 34455666


Q ss_pred             CCccccccCCcc
Q 040392           82 NFSVESFEGNEL   93 (470)
Q Consensus        82 ~l~~l~~~~n~~   93 (470)
                      +|+.|++++|.+
T Consensus       116 ~L~~L~L~~N~i  127 (198)
T d1m9la_         116 NLRVLYMSNNKI  127 (198)
T ss_dssp             HSSEEEESEEEC
T ss_pred             cccccccccchh
Confidence            777777777765


No 80 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.74  E-value=8e-09  Score=95.74  Aligned_cols=86  Identities=26%  Similarity=0.187  Sum_probs=77.8

Q ss_pred             CCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCccccc
Q 040392            9 LKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESF   88 (470)
Q Consensus         9 l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~   88 (470)
                      +++|+.|++++|.+++..+..|.+++.++.|++++|.+++..+..+..+++|+.|+|++|.|+..++.+..+++|+.|++
T Consensus       170 ~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~lp~~l~~l~~L~~L~L  249 (305)
T d1xkua_         170 PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYL  249 (305)
T ss_dssp             CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEEC
T ss_pred             CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccccccccccccCCCEEEC
Confidence            57888999999998888888899999999999999999987788899999999999999999977777888999999999


Q ss_pred             cCCccc
Q 040392           89 EGNELL   94 (470)
Q Consensus        89 ~~n~~~   94 (470)
                      ++|++.
T Consensus       250 s~N~i~  255 (305)
T d1xkua_         250 HNNNIS  255 (305)
T ss_dssp             CSSCCC
T ss_pred             CCCccC
Confidence            999975


No 81 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.73  E-value=9.5e-09  Score=94.26  Aligned_cols=93  Identities=25%  Similarity=0.306  Sum_probs=58.8

Q ss_pred             CcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCC-CCCC
Q 040392            3 PTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRG-GPFR   81 (470)
Q Consensus         3 p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~-~~l~   81 (470)
                      |..|.++++|+.|+|++|.+....+..+....+|+.+++++|.|++..+..|..+++|+.|++++|.|++.++.. ..++
T Consensus        98 ~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~  177 (284)
T d1ozna_          98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLH  177 (284)
T ss_dssp             TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT
T ss_pred             chhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhcccc
Confidence            445666677777777777666555555666666677777777766555556666666666777766666554443 4566


Q ss_pred             CCccccccCCcccc
Q 040392           82 NFSVESFEGNELLC   95 (470)
Q Consensus        82 ~l~~l~~~~n~~~~   95 (470)
                      +|+.+++.+|.+..
T Consensus       178 ~L~~l~l~~N~l~~  191 (284)
T d1ozna_         178 SLDRLLLHQNRVAH  191 (284)
T ss_dssp             TCCEEECCSSCCCE
T ss_pred             ccchhhhhhccccc
Confidence            66666666666543


No 82 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.71  E-value=6.7e-09  Score=99.25  Aligned_cols=81  Identities=26%  Similarity=0.377  Sum_probs=52.5

Q ss_pred             cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392            6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV   85 (470)
Q Consensus         6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~   85 (470)
                      +..+++++.|+|++|++++..  .+..+++|+.|+|++|+|+ .++ .+..+++|+.|++++|+|++.+| +..+++|+.
T Consensus       303 ~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~~L~l~~N~l~~l~~-l~~l~~L~~  377 (384)
T d2omza2         303 ISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVS-DVS-SLANLTNINWLSAGHNQISDLTP-LANLTRITQ  377 (384)
T ss_dssp             GGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCC-CCG-GGGGCTTCCEEECCSSCCCBCGG-GTTCTTCSE
T ss_pred             cchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCC-CCh-hHcCCCCCCEEECCCCcCCCChh-hccCCCCCE
Confidence            455666677777777776542  2666777777777777776 344 46667777777777777765544 556667777


Q ss_pred             ccccCC
Q 040392           86 ESFEGN   91 (470)
Q Consensus        86 l~~~~n   91 (470)
                      |++++|
T Consensus       378 L~L~~N  383 (384)
T d2omza2         378 LGLNDQ  383 (384)
T ss_dssp             EECCCE
T ss_pred             eeCCCC
Confidence            776665


No 83 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.67  E-value=1.9e-08  Score=87.02  Aligned_cols=83  Identities=23%  Similarity=0.297  Sum_probs=44.6

Q ss_pred             cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392            6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV   85 (470)
Q Consensus         6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~   85 (470)
                      +..|++|++|+|++|++++..  .+.++++|+.|++++|.+. .++. +..+++|+.|++++|.+.. ++.+..+++|+.
T Consensus        58 l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~n~~~-~~~~-l~~l~~L~~L~l~~~~~~~-~~~~~~l~~L~~  132 (199)
T d2omxa2          58 VEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIA-DITP-LANLTNLTGLTLFNNQITD-IDPLKNLTNLNR  132 (199)
T ss_dssp             GGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCC-CCGG-GTTCTTCSEEECCSSCCCC-CGGGTTCTTCSE
T ss_pred             cccCCCcCcCccccccccCcc--cccCCcccccccccccccc-cccc-ccccccccccccccccccc-ccccchhhhhHH
Confidence            445555666666666655332  2555556666666666555 3332 5555555556665555542 233445555666


Q ss_pred             ccccCCcc
Q 040392           86 ESFEGNEL   93 (470)
Q Consensus        86 l~~~~n~~   93 (470)
                      +++++|.+
T Consensus       133 L~l~~n~l  140 (199)
T d2omxa2         133 LELSSNTI  140 (199)
T ss_dssp             EECCSSCC
T ss_pred             hhhhhhhh
Confidence            66655554


No 84 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.60  E-value=2.8e-08  Score=87.81  Aligned_cols=79  Identities=24%  Similarity=0.386  Sum_probs=45.3

Q ss_pred             cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392            6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV   85 (470)
Q Consensus         6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~   85 (470)
                      +.++++|+.|++++|.+++.  ..+.++++|+.|+|++|++++ +++ +..+++|+.|++++|+|++. +.+..+++|+.
T Consensus       147 ~~~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~-l~~-l~~l~~L~~L~Ls~N~lt~i-~~l~~l~~L~~  221 (227)
T d1h6ua2         147 LAGLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISD-ISP-LASLPNLIEVHLKNNQISDV-SPLANTSNLFI  221 (227)
T ss_dssp             GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECTTSCCCBC-GGGTTCTTCCE
T ss_pred             hccccccccccccccccccc--hhhcccccceecccCCCccCC-Chh-hcCCCCCCEEECcCCcCCCC-cccccCCCCCE
Confidence            44556666666666666533  235566666666666666663 332 55666666666666666633 23455666666


Q ss_pred             cccc
Q 040392           86 ESFE   89 (470)
Q Consensus        86 l~~~   89 (470)
                      |+++
T Consensus       222 L~ls  225 (227)
T d1h6ua2         222 VTLT  225 (227)
T ss_dssp             EEEE
T ss_pred             EEee
Confidence            6554


No 85 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.56  E-value=3.8e-10  Score=97.90  Aligned_cols=91  Identities=25%  Similarity=0.275  Sum_probs=76.2

Q ss_pred             ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccC--CCCCCCCC
Q 040392            5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEI--PRGGPFRN   82 (470)
Q Consensus         5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~--~~~~~l~~   82 (470)
                      .+.+|++|+.|+|++|.|+ .+|..+..+++|+.|++++|+|+ .++ .+..+++|+.|++++|+|+...  ..+..+++
T Consensus        65 ~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~  141 (198)
T d1m9la_          65 SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDK  141 (198)
T ss_dssp             CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTT
T ss_pred             cccCCccccChhhcccccc-ccccccccccccccccccccccc-ccc-cccccccccccccccchhccccccccccCCCc
Confidence            4778899999999999999 66766666778999999999999 454 4888999999999999998543  34678999


Q ss_pred             CccccccCCccccCCC
Q 040392           83 FSVESFEGNELLCGSP   98 (470)
Q Consensus        83 l~~l~~~~n~~~~~~~   98 (470)
                      |+.|++++|++....+
T Consensus       142 L~~L~L~~N~l~~~~~  157 (198)
T d1m9la_         142 LEDLLLAGNPLYNDYK  157 (198)
T ss_dssp             CSEEEECSSHHHHHHC
T ss_pred             cceeecCCCccccCcc
Confidence            9999999999865433


No 86 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.55  E-value=6e-08  Score=84.54  Aligned_cols=81  Identities=21%  Similarity=0.269  Sum_probs=60.5

Q ss_pred             CCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcccc
Q 040392            8 GLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVES   87 (470)
Q Consensus         8 ~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~   87 (470)
                      .|.+|+.|++++|.++..  ..+..+++|+.|+|++|+|++ ++ .+..+++|+.|++++|+|++ ++.+..+++|+.++
T Consensus        44 ~L~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-l~~l~~l~~L~~L~  118 (210)
T d1h6ta2          44 ELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLS  118 (210)
T ss_dssp             HHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEE
T ss_pred             HhcCccEEECcCCCCCCc--hhHhhCCCCCEEeCCCccccC-cc-ccccCccccccccccccccc-cccccccccccccc
Confidence            366788888888888744  247778888888888888884 43 26778888888888888874 44567778888888


Q ss_pred             ccCCcc
Q 040392           88 FEGNEL   93 (470)
Q Consensus        88 ~~~n~~   93 (470)
                      +.+|.+
T Consensus       119 l~~~~~  124 (210)
T d1h6ta2         119 LEHNGI  124 (210)
T ss_dssp             CTTSCC
T ss_pred             cccccc
Confidence            887765


No 87 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.51  E-value=1.2e-07  Score=81.70  Aligned_cols=83  Identities=25%  Similarity=0.417  Sum_probs=42.8

Q ss_pred             cCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcc
Q 040392            6 IGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSV   85 (470)
Q Consensus         6 ~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~   85 (470)
                      |+++++|+.|++++|.+.. +| .+.++++|+.|++++|.+.. . ..+..+++|+.|++++|++. .++.+..+++|+.
T Consensus        80 l~~l~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~l~~~~~~~-~-~~~~~l~~L~~L~l~~n~l~-~~~~l~~~~~L~~  154 (199)
T d2omxa2          80 LKNLTKLVDILMNNNQIAD-IT-PLANLTNLTGLTLFNNQITD-I-DPLKNLTNLNRLELSSNTIS-DISALSGLTSLQQ  154 (199)
T ss_dssp             GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCC-CCGGGTTCTTCSE
T ss_pred             ccCCccccccccccccccc-cc-cccccccccccccccccccc-c-cccchhhhhHHhhhhhhhhc-ccccccccccccc
Confidence            5566666666666666652 22 35555555555555555552 2 12445555555555555554 2233344444445


Q ss_pred             ccccCCcc
Q 040392           86 ESFEGNEL   93 (470)
Q Consensus        86 l~~~~n~~   93 (470)
                      +++.+|.+
T Consensus       155 L~l~~n~l  162 (199)
T d2omxa2         155 LNFSSNQV  162 (199)
T ss_dssp             EECCSSCC
T ss_pred             cccccccc
Confidence            55444443


No 88 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.47  E-value=1e-07  Score=83.08  Aligned_cols=85  Identities=24%  Similarity=0.282  Sum_probs=70.6

Q ss_pred             ccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCc
Q 040392            5 EIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFS   84 (470)
Q Consensus         5 ~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~   84 (470)
                      .+.++++|+.|++++|.+...  +.+..+++|+.+++++|.+++ . ..+..+++|+.+++++|++++. +.+..+++|+
T Consensus       107 ~l~~l~~L~~L~l~~~~~~~~--~~l~~l~~l~~l~~~~n~l~~-~-~~~~~l~~L~~l~l~~n~l~~i-~~l~~l~~L~  181 (210)
T d1h6ta2         107 SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDI-VPLAGLTKLQ  181 (210)
T ss_dssp             GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCC-GGGTTCTTCC
T ss_pred             ccccccccccccccccccccc--ccccccccccccccccccccc-c-cccccccccccccccccccccc-ccccCCCCCC
Confidence            578899999999999998733  468889999999999999984 3 3477889999999999999854 4477889999


Q ss_pred             cccccCCccc
Q 040392           85 VESFEGNELL   94 (470)
Q Consensus        85 ~l~~~~n~~~   94 (470)
                      .|++++|++.
T Consensus       182 ~L~Ls~N~i~  191 (210)
T d1h6ta2         182 NLYLSKNHIS  191 (210)
T ss_dssp             EEECCSSCCC
T ss_pred             EEECCCCCCC
Confidence            9999999874


No 89 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=98.35  E-value=7.2e-07  Score=79.74  Aligned_cols=130  Identities=17%  Similarity=0.114  Sum_probs=87.8

Q ss_pred             eecccCc-eEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCC--CCcceeEEeeeccCCeeeEEEecCCCCCh
Q 040392          180 LIGRGGF-GSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIR--HRNLIKVISTCSNEEFKALVLEYMPHGSL  256 (470)
Q Consensus       180 ~ig~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~nIv~~~~~~~~~~~~~lv~e~~~~g~L  256 (470)
                      .+..|.. +.||+....++..+++|.....   ....+..|...++.+.  .-.+.+++.+..+++..++||++++|.++
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~---~~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCcc---CHhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            4455554 6899999888888999986543   3345777888888774  33467788888888888999999988665


Q ss_pred             HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc------------------------------------------------
Q 040392          257 EKYMYSSNYILDIFQRLNIMIDVASALEYLHF------------------------------------------------  288 (470)
Q Consensus       257 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~------------------------------------------------  288 (470)
                      .+..      ...   ...+.++.+.|.-||.                                                
T Consensus        94 ~~~~------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (255)
T d1nd4a_          94 LSSH------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR  164 (255)
T ss_dssp             TTSC------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred             cccc------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHH
Confidence            3321      111   1122233333333331                                                


Q ss_pred             -------CCCCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392          289 -------GYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK  321 (470)
Q Consensus       289 -------~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~  321 (470)
                             .....++|+|+.|.||+++++..+-|+||+.+.
T Consensus       165 l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         165 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence                   012248999999999999988778899998775


No 90 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.32  E-value=3.1e-07  Score=87.33  Aligned_cols=82  Identities=21%  Similarity=0.244  Sum_probs=70.5

Q ss_pred             CCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcccc
Q 040392            8 GLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVES   87 (470)
Q Consensus         8 ~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~   87 (470)
                      .+.+|+.|++++|.|+..  +.+..+++|++|+|++|+|+ .+|+ +..+++|+.|++++|.|.+. +.+..+++|+.++
T Consensus        42 ~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~-~l~~-l~~L~~L~~L~L~~n~i~~i-~~l~~l~~L~~L~  116 (384)
T d2omza2          42 DLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLT-DITP-LKNLTKLVDILMNNNQIADI-TPLANLTNLTGLT  116 (384)
T ss_dssp             HHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEE
T ss_pred             HhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCC-CCcc-ccCCcccccccccccccccc-ccccccccccccc
Confidence            467899999999999943  56888999999999999999 4553 99999999999999999854 4478899999999


Q ss_pred             ccCCccc
Q 040392           88 FEGNELL   94 (470)
Q Consensus        88 ~~~n~~~   94 (470)
                      +.+|.+.
T Consensus       117 ~~~~~~~  123 (384)
T d2omza2         117 LFNNQIT  123 (384)
T ss_dssp             CCSSCCC
T ss_pred             ccccccc
Confidence            9888764


No 91 
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.25  E-value=1.4e-07  Score=78.52  Aligned_cols=65  Identities=32%  Similarity=0.216  Sum_probs=35.2

Q ss_pred             CCCCCcEeeCcCCcCCCCC--CccccCCCCCCEEeccCCcCCCCCcc-cccCCCCCCceecCCcccccc
Q 040392            8 GLKNLEYLFLGYNRLQGPI--PDSFGDLISLKFLNLSNNNLSGAIPA-SLEKLSYLENLNLSFNKLEGE   73 (470)
Q Consensus         8 ~l~~l~~l~l~~n~l~~~~--p~~~~~l~~L~~l~l~~n~i~~~~~~-~~~~l~~L~~l~l~~N~l~~~   73 (470)
                      ++++|+.|+|++|+|+..-  +..+..+++|+.|+|++|.|+ .+++ .+....+|+.|++++|.+...
T Consensus        63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~  130 (162)
T d1koha1          63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDT  130 (162)
T ss_dssp             HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSS
T ss_pred             hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcCcC
Confidence            4566666666666666331  233445666666666666666 3332 223344566666666666543


No 92 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24  E-value=5.9e-07  Score=79.69  Aligned_cols=91  Identities=18%  Similarity=0.233  Sum_probs=73.7

Q ss_pred             CCcccCCCCCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCC-cccccCCCCCCceecC-CccccccCCCC-C
Q 040392            2 IPTEIGGLKNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAI-PASLEKLSYLENLNLS-FNKLEGEIPRG-G   78 (470)
Q Consensus         2 ~p~~~~~l~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~-~~~~~~l~~L~~l~l~-~N~l~~~~~~~-~   78 (470)
                      +|+++.  +++++|+|++|+|+...+..|.++++|++|+|++|.+.+.+ +..|..++.++.+.+. .|.+....+.. .
T Consensus        23 iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~  100 (242)
T d1xwdc1          23 IPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQ  100 (242)
T ss_dssp             CCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEE
T ss_pred             cCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccc
Confidence            565553  58999999999999555567899999999999999988654 4568899999999876 46777666554 6


Q ss_pred             CCCCCccccccCCccc
Q 040392           79 PFRNFSVESFEGNELL   94 (470)
Q Consensus        79 ~l~~l~~l~~~~n~~~   94 (470)
                      .+++|+.+++.+|.+.
T Consensus       101 ~l~~L~~l~l~~~~l~  116 (242)
T d1xwdc1         101 NLPNLQYLLISNTGIK  116 (242)
T ss_dssp             CCTTCCEEEEESCCCC
T ss_pred             ccccccccccchhhhc
Confidence            7899999999999874


No 93 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.13  E-value=2.2e-06  Score=75.18  Aligned_cols=80  Identities=25%  Similarity=0.397  Sum_probs=58.5

Q ss_pred             CCCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCcccccc
Q 040392           10 KNLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFE   89 (470)
Q Consensus        10 ~~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~   89 (470)
                      +.+..+.++++.+...  ..+.++++|+.|++++|.+++..  .+..+++|+.|++++|++++ ++.+..+++|+.|+++
T Consensus       129 ~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~~--~l~~l~~L~~L~Ls~n~l~~-l~~l~~l~~L~~L~Ls  203 (227)
T d1h6ua2         129 SNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDLT--PLANLSKLTTLKADDNKISD-ISPLASLPNLIEVHLK  203 (227)
T ss_dssp             TTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCC-CGGGGGCTTCCEEECT
T ss_pred             cchhhhhchhhhhchh--hhhccccccccccccccccccch--hhcccccceecccCCCccCC-ChhhcCCCCCCEEECc
Confidence            3333444444443322  34666788999999999988433  38899999999999999985 4557788999999999


Q ss_pred             CCccc
Q 040392           90 GNELL   94 (470)
Q Consensus        90 ~n~~~   94 (470)
                      +|++.
T Consensus       204 ~N~lt  208 (227)
T d1h6ua2         204 NNQIS  208 (227)
T ss_dssp             TSCCC
T ss_pred             CCcCC
Confidence            99875


No 94 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.04  E-value=5.8e-06  Score=77.02  Aligned_cols=53  Identities=26%  Similarity=0.258  Sum_probs=25.1

Q ss_pred             CCcEeeCcCCcCCCCCCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCcccc
Q 040392           11 NLEYLFLGYNRLQGPIPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLE   71 (470)
Q Consensus        11 ~l~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~   71 (470)
                      +++.|||++|.|+ .+|+.   +++|++|+|++|+|+ .+|+.+   ++|+.|++++|.++
T Consensus        39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~   91 (353)
T d1jl5a_          39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK   91 (353)
T ss_dssp             TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS
T ss_pred             CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc
Confidence            3455555555555 34432   334555555555555 444332   33444444444443


No 95 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.03  E-value=3.9e-06  Score=78.23  Aligned_cols=55  Identities=40%  Similarity=0.397  Sum_probs=33.9

Q ss_pred             CCCCCEEeccCCcCCCCCcccccCCCCCCceecCCccccccCCCCCCCCCCccccccCCccc
Q 040392           33 LISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPRGGPFRNFSVESFEGNELL   94 (470)
Q Consensus        33 l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~l~~l~~l~~~~n~~~   94 (470)
                      +++|++|+|++|+|+ .+|..   +++|+.|++++|+|+. +|.  .+.+|+.|++++|++.
T Consensus       283 ~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~L~~N~L~~-l~~--~~~~L~~L~L~~N~L~  337 (353)
T d1jl5a_         283 PPSLEELNVSNNKLI-ELPAL---PPRLERLIASFNHLAE-VPE--LPQNLKQLHVEYNPLR  337 (353)
T ss_dssp             CTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCS
T ss_pred             CCCCCEEECCCCccC-ccccc---cCCCCEEECCCCcCCc-ccc--ccCCCCEEECcCCcCC
Confidence            456777777777776 55542   4566677777777663 332  2456666777777654


No 96 
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.97  E-value=1.6e-07  Score=78.06  Aligned_cols=64  Identities=31%  Similarity=0.231  Sum_probs=50.2

Q ss_pred             cCCCCCCEEeccCCcCCCC--CcccccCCCCCCceecCCccccccCCCC--CCCCCCccccccCCcccc
Q 040392           31 GDLISLKFLNLSNNNLSGA--IPASLEKLSYLENLNLSFNKLEGEIPRG--GPFRNFSVESFEGNELLC   95 (470)
Q Consensus        31 ~~l~~L~~l~l~~n~i~~~--~~~~~~~l~~L~~l~l~~N~l~~~~~~~--~~l~~l~~l~~~~n~~~~   95 (470)
                      .++++|++|+|++|+|+..  ++..+..+++|+.|++++|.|+...+ +  ....+|+.+++.+|++.+
T Consensus        62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~-l~~l~~~~L~~L~L~~Npl~~  129 (162)
T d1koha1          62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERE-LDKIKGLKLEELWLDGNSLSD  129 (162)
T ss_dssp             HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGG-HHHHTTCCCSSCCCTTSTTSS
T ss_pred             HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchh-hhhhhccccceeecCCCCcCc
Confidence            4588999999999999943  23456789999999999999995433 2  233468999999999854


No 97 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.82  E-value=4.1e-05  Score=72.66  Aligned_cols=76  Identities=16%  Similarity=0.162  Sum_probs=49.8

Q ss_pred             CCeecccCceEEEEEEeCC-CcEEEEEEeeccc-------chhhhhHHHHHHHHhcCC-C--CcceeEEeeeccCCeeeE
Q 040392          178 NNLIGRGGFGSVYKARLGD-GMEVAVKVFNLQC-------GRALKGFDVECEMMKSIR-H--RNLIKVISTCSNEEFKAL  246 (470)
Q Consensus       178 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~-------~~~~~~~~~E~~~l~~l~-h--~nIv~~~~~~~~~~~~~l  246 (470)
                      .+.||.|....||++...+ ++.++||.-.+..       .....+...|.+.++.+. +  ..+.+++.+.  ++..++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~d--~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEEc--CCCCEE
Confidence            3568999999999998654 6789999754321       112345566888887663 2  3456666654  344578


Q ss_pred             EEecCCCCC
Q 040392          247 VLEYMPHGS  255 (470)
Q Consensus       247 v~e~~~~g~  255 (470)
                      |||++++..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997654


No 98 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.73  E-value=1.4e-05  Score=70.38  Aligned_cols=77  Identities=19%  Similarity=0.082  Sum_probs=41.0

Q ss_pred             CCcEeeCcCCcCCCCCCccccCCCCCCEE-eccCCcCCCCCcccccCCCCCCceecCCccccccCCC-CCCCCCCccccc
Q 040392           11 NLEYLFLGYNRLQGPIPDSFGDLISLKFL-NLSNNNLSGAIPASLEKLSYLENLNLSFNKLEGEIPR-GGPFRNFSVESF   88 (470)
Q Consensus        11 ~l~~l~l~~n~l~~~~p~~~~~l~~L~~l-~l~~n~i~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~-~~~l~~l~~l~~   88 (470)
                      .+..|++++|+++. ++.......+++.+ ++++|+|+...+..|..+++|+.|++++|+|+..++. +..+++|+.+++
T Consensus       154 ~l~~L~l~~n~l~~-i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~  232 (242)
T d1xwdc1         154 ESVILWLNKNGIQE-IHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST  232 (242)
T ss_dssp             SCEEEECCSSCCCE-ECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred             cceeeecccccccc-cccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence            55666666666663 33333334444333 4566666633234466666777777777766644443 244444444444


No 99 
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=97.29  E-value=0.00056  Score=62.79  Aligned_cols=133  Identities=14%  Similarity=0.145  Sum_probs=77.1

Q ss_pred             ceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcc--eeEEe-----eeccCCeeeEEEecCCCCChH-
Q 040392          186 FGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL--IKVIS-----TCSNEEFKALVLEYMPHGSLE-  257 (470)
Q Consensus       186 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI--v~~~~-----~~~~~~~~~lv~e~~~~g~L~-  257 (470)
                      --.||+++..+|+.|++|+.++. ....+.+..|...+..|....+  +..+.     .+...+..+.++++++|..+. 
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             cceeEEEEcCCCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence            46899999999999999998754 2244557778888887753222  11111     123356678899999764321 


Q ss_pred             ----Hhh-------------hcC----CCCCCHH----------------------HHHHHHHHHHHHHHHH-hcCCCCC
Q 040392          258 ----KYM-------------YSS----NYILDIF----------------------QRLNIMIDVASALEYL-HFGYSAP  293 (470)
Q Consensus       258 ----~~l-------------~~~----~~~~~~~----------------------~~~~i~~~i~~~L~~L-H~~~~~~  293 (470)
                          .+-             ...    ....+..                      .....+..+...+.-. ......+
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence                110             000    0111111                      1112223333333222 1223467


Q ss_pred             eeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392          294 IIHCDLKPSNVLLDDNMVAHLSDFSIAK  321 (470)
Q Consensus       294 i~H~dlkp~Nill~~~~~~kl~Dfg~a~  321 (470)
                      ++|+|+.+.|||++++  ..++||+-+.
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~  219 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDAR  219 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCC
T ss_pred             eecCCCCcccEEEeCC--ceEEechhcc
Confidence            8999999999999743  4589999876


No 100
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.20  E-value=0.0007  Score=63.95  Aligned_cols=73  Identities=19%  Similarity=0.230  Sum_probs=50.1

Q ss_pred             CCeecccCceEEEEEEeCC--------CcEEEEEEeecccchhhhhHHHHHHHHhcCCCCc-ceeEEeeeccCCeeeEEE
Q 040392          178 NNLIGRGGFGSVYKARLGD--------GMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRN-LIKVISTCSNEEFKALVL  248 (470)
Q Consensus       178 ~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~~~~~~~~~~~~~lv~  248 (470)
                      ++.|+.|-.-.+|++..++        ...|.+++.. ... ......+|..+++.+.-.+ ..++++++.+    .+|+
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~-~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~  120 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPE-TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  120 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCC-CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccc-hhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence            3578889999999998654        3567777765 222 2334567888888885333 3577887754    5899


Q ss_pred             ecCCCCCh
Q 040392          249 EYMPHGSL  256 (470)
Q Consensus       249 e~~~~g~L  256 (470)
                      ||++|.++
T Consensus       121 efi~g~~l  128 (395)
T d1nw1a_         121 EYIPSRPL  128 (395)
T ss_dssp             CCCCEEEC
T ss_pred             EEeccccC
Confidence            99987544


No 101
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.19  E-value=1.8e-05  Score=71.66  Aligned_cols=85  Identities=18%  Similarity=0.045  Sum_probs=64.6

Q ss_pred             CCCCCCcEeeCcCCcCCCC-CCccccCCCCCCEEeccCCcCCCCCcccccCCCCCCceecCCc-cccc--cCCCCCCCCC
Q 040392            7 GGLKNLEYLFLGYNRLQGP-IPDSFGDLISLKFLNLSNNNLSGAIPASLEKLSYLENLNLSFN-KLEG--EIPRGGPFRN   82 (470)
Q Consensus         7 ~~l~~l~~l~l~~n~l~~~-~p~~~~~l~~L~~l~l~~n~i~~~~~~~~~~l~~L~~l~l~~N-~l~~--~~~~~~~l~~   82 (470)
                      ....+|++|||+++.++.. ++..+.++++|++|+|++|.+++..+..+..+++|+.|+++++ .++.  ...-...+++
T Consensus        43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~  122 (284)
T d2astb2          43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR  122 (284)
T ss_dssp             CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred             ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHh
Confidence            4567899999999988743 3445678899999999999998777788889999999999984 5652  1111245788


Q ss_pred             CccccccCC
Q 040392           83 FSVESFEGN   91 (470)
Q Consensus        83 l~~l~~~~n   91 (470)
                      |+.|+++++
T Consensus       123 L~~L~ls~c  131 (284)
T d2astb2         123 LDELNLSWC  131 (284)
T ss_dssp             CCEEECCCC
T ss_pred             ccccccccc
Confidence            899988764


No 102
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.18  E-value=1.2e-05  Score=77.43  Aligned_cols=87  Identities=20%  Similarity=0.150  Sum_probs=51.2

Q ss_pred             CCCCCCcEeeCcCCcCCC----CCCccccCCCCCCEEeccCCcCCCC----Cccccc-CCCCCCceecCCcccccc----
Q 040392            7 GGLKNLEYLFLGYNRLQG----PIPDSFGDLISLKFLNLSNNNLSGA----IPASLE-KLSYLENLNLSFNKLEGE----   73 (470)
Q Consensus         7 ~~l~~l~~l~l~~n~l~~----~~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~-~l~~L~~l~l~~N~l~~~----   73 (470)
                      ..+++++.|+|++|.++.    .+...+..+++|+.|||++|.|+..    +...+. ...+|+.|++++|.|++.    
T Consensus        24 ~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~  103 (460)
T d1z7xw1          24 PLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGV  103 (460)
T ss_dssp             HHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHH
T ss_pred             HhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCcccccccc
Confidence            345677777777777662    2233456677777777777777521    111222 234677777777777532    


Q ss_pred             -CCCCCCCCCCccccccCCcc
Q 040392           74 -IPRGGPFRNFSVESFEGNEL   93 (470)
Q Consensus        74 -~~~~~~l~~l~~l~~~~n~~   93 (470)
                       ...+..+++|+.|++++|.+
T Consensus       104 l~~~l~~~~~L~~L~L~~N~i  124 (460)
T d1z7xw1         104 LSSTLRTLPTLQELHLSDNLL  124 (460)
T ss_dssp             HHHHTTSCTTCCEEECCSSBC
T ss_pred             ccchhhccccccccccccccc
Confidence             11234566777777777765


No 103
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.11  E-value=2.1e-05  Score=73.32  Aligned_cols=87  Identities=16%  Similarity=0.131  Sum_probs=45.2

Q ss_pred             CCCCCCcEeeCcCCcCCCC-----CCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceecCCccccccCC--
Q 040392            7 GGLKNLEYLFLGYNRLQGP-----IPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNLSFNKLEGEIP--   75 (470)
Q Consensus         7 ~~l~~l~~l~l~~n~l~~~-----~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l~~N~l~~~~~--   75 (470)
                      ..+++|+.|+|+.|+++..     +...+..+++|+.|+|++|.++..    +...+..+++|+.|++++|.|++.-.  
T Consensus       183 ~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~  262 (344)
T d2ca6a1         183 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA  262 (344)
T ss_dssp             HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred             hhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHH
Confidence            3455666666666666521     222344556666666666665422    23345556666666666666653100  


Q ss_pred             ---CC--CCCCCCccccccCCcc
Q 040392           76 ---RG--GPFRNFSVESFEGNEL   93 (470)
Q Consensus        76 ---~~--~~l~~l~~l~~~~n~~   93 (470)
                         .+  ....+|+.|++++|++
T Consensus       263 l~~~l~~~~~~~L~~L~ls~N~i  285 (344)
T d2ca6a1         263 VVDAFSKLENIGLQTLRLQYNEI  285 (344)
T ss_dssp             HHHHHHTCSSCCCCEEECCSSCC
T ss_pred             HHHHhhhccCCCCCEEECCCCcC
Confidence               00  1224456666666654


No 104
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.10  E-value=0.0013  Score=59.93  Aligned_cols=156  Identities=15%  Similarity=0.099  Sum_probs=84.7

Q ss_pred             cCHHHHHHhhCCCCCCCee-----cccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcc--eeEE
Q 040392          163 FSHLELCRATDGFSENNLI-----GRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNL--IKVI  235 (470)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~i-----g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI--v~~~  235 (470)
                      .+..++.....+|.+.+..     ..|---+.|+.+..+| .+++|++...  ...+.+..|.+++..|...++  ...+
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~--~~~~~l~~~~~~l~~L~~~g~pvp~pi   79 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL   79 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCC--CCHHHHHHHHHHHHhhhhccccccccc
Confidence            4567777778888876544     4566688899988665 4899998643  223445557777777642222  1111


Q ss_pred             ee------eccCCeeeEEEecCCCCChHHh--------------hhc----CC----CCCC------------------H
Q 040392          236 ST------CSNEEFKALVLEYMPHGSLEKY--------------MYS----SN----YILD------------------I  269 (470)
Q Consensus       236 ~~------~~~~~~~~lv~e~~~~g~L~~~--------------l~~----~~----~~~~------------------~  269 (470)
                      ..      .........++.+..+......              ++.    ..    ....                  .
T Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (316)
T d2ppqa1          80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  159 (316)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence            11      1123445566666655322110              000    00    0000                  0


Q ss_pred             HHHHHHHHHHHHHHHHHh-cCCCCCeeecCCCCCCeeeCCCCCeEEeeecccc
Q 040392          270 FQRLNIMIDVASALEYLH-FGYSAPIIHCDLKPSNVLLDDNMVAHLSDFSIAK  321 (470)
Q Consensus       270 ~~~~~i~~~i~~~L~~LH-~~~~~~i~H~dlkp~Nill~~~~~~kl~Dfg~a~  321 (470)
                      ......+......+...+ .....++||+|+.+.||+++.+...-+.||+.+.
T Consensus       160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            011122222233333333 1235789999999999999998888999999875


No 105
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.94  E-value=2.9e-05  Score=72.29  Aligned_cols=86  Identities=17%  Similarity=0.158  Sum_probs=59.9

Q ss_pred             CCCCCcEeeCcCCcCCCC----CCccccCCCCCCEEeccCCcCCCC-----CcccccCCCCCCceecCCcccccc-----
Q 040392            8 GLKNLEYLFLGYNRLQGP----IPDSFGDLISLKFLNLSNNNLSGA-----IPASLEKLSYLENLNLSFNKLEGE-----   73 (470)
Q Consensus         8 ~l~~l~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~n~i~~~-----~~~~~~~l~~L~~l~l~~N~l~~~-----   73 (470)
                      ..+.|+.|++++|.++..    +...+...+.|+.|+|++|.|+..     +...+..+++|+.|++++|.|+..     
T Consensus       156 ~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L  235 (344)
T d2ca6a1         156 NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSAL  235 (344)
T ss_dssp             TCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHH
T ss_pred             cCcccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccc
Confidence            456788888888887632    223345577888888888888632     334566788888888888887532     


Q ss_pred             CCCCCCCCCCccccccCCcc
Q 040392           74 IPRGGPFRNFSVESFEGNEL   93 (470)
Q Consensus        74 ~~~~~~l~~l~~l~~~~n~~   93 (470)
                      ...+..+++|+.|++++|.+
T Consensus       236 ~~~l~~~~~L~~L~Ls~n~i  255 (344)
T d2ca6a1         236 AIALKSWPNLRELGLNDCLL  255 (344)
T ss_dssp             HHHGGGCTTCCEEECTTCCC
T ss_pred             cccccccccchhhhhhcCcc
Confidence            12335677888888888876


No 106
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.81  E-value=6.4e-05  Score=72.20  Aligned_cols=84  Identities=20%  Similarity=0.101  Sum_probs=35.5

Q ss_pred             CCCcEeeCcCCcCCCCCCc----cccCCCCCCEEeccCCcCCCC----Cccccc-CCCCCCceecCCcccccc----C-C
Q 040392           10 KNLEYLFLGYNRLQGPIPD----SFGDLISLKFLNLSNNNLSGA----IPASLE-KLSYLENLNLSFNKLEGE----I-P   75 (470)
Q Consensus        10 ~~l~~l~l~~n~l~~~~p~----~~~~l~~L~~l~l~~n~i~~~----~~~~~~-~l~~L~~l~l~~N~l~~~----~-~   75 (470)
                      ..|+.+++++|.++.....    .+...++|++|+|++|.|++.    ++..+. ..+.|+.|+|++|.|+..    + .
T Consensus       312 ~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~  391 (460)
T d1z7xw1         312 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA  391 (460)
T ss_dssp             CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred             cccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHH
Confidence            3455555555555422111    122234555555555555421    112222 234455555555555421    0 0


Q ss_pred             CCCCCCCCccccccCCcc
Q 040392           76 RGGPFRNFSVESFEGNEL   93 (470)
Q Consensus        76 ~~~~l~~l~~l~~~~n~~   93 (470)
                      .+..+++|+.|++++|++
T Consensus       392 ~l~~~~~L~~L~Ls~N~i  409 (460)
T d1z7xw1         392 TLLANHSLRELDLSNNCL  409 (460)
T ss_dssp             HHHHCCCCCEEECCSSSC
T ss_pred             HHhcCCCCCEEECCCCcC
Confidence            112334555555555554


No 107
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.68  E-value=0.00058  Score=61.35  Aligned_cols=83  Identities=22%  Similarity=0.198  Sum_probs=50.7

Q ss_pred             CCCCcEeeCcCC--cCCCC-CCccccCCCCCCEEeccCC-cCCCCCcccccCCCCCCceecCCc-ccccc-CCCCCCCCC
Q 040392            9 LKNLEYLFLGYN--RLQGP-IPDSFGDLISLKFLNLSNN-NLSGAIPASLEKLSYLENLNLSFN-KLEGE-IPRGGPFRN   82 (470)
Q Consensus         9 l~~l~~l~l~~n--~l~~~-~p~~~~~l~~L~~l~l~~n-~i~~~~~~~~~~l~~L~~l~l~~N-~l~~~-~~~~~~l~~   82 (470)
                      .++|+.|+++++  .++.. +...+.++++|++|+|++| .+++.....+..+++|+.|+++++ .|++. +..+..+++
T Consensus       147 ~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~  226 (284)
T d2astb2         147 SETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPT  226 (284)
T ss_dssp             CTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTT
T ss_pred             ccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCC
Confidence            367777777754  33321 1122345677778888775 466666666777777788888773 45532 223456677


Q ss_pred             CccccccCC
Q 040392           83 FSVESFEGN   91 (470)
Q Consensus        83 l~~l~~~~n   91 (470)
                      |+.|++.++
T Consensus       227 L~~L~l~~~  235 (284)
T d2astb2         227 LKTLQVFGI  235 (284)
T ss_dssp             CCEEECTTS
T ss_pred             CCEEeeeCC
Confidence            777777654


No 108
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.65  E-value=0.00025  Score=58.35  Aligned_cols=87  Identities=14%  Similarity=0.101  Sum_probs=64.0

Q ss_pred             CCCCCCcEeeCcCC-cCCCC----CCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceecCCcccccc----
Q 040392            7 GGLKNLEYLFLGYN-RLQGP----IPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNLSFNKLEGE----   73 (470)
Q Consensus         7 ~~l~~l~~l~l~~n-~l~~~----~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l~~N~l~~~----   73 (470)
                      .+.++|+.|+|+++ .++..    +-..+...++|+.|+|++|.++..    +...+...++|+.|++++|.|+..    
T Consensus        12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~   91 (167)
T d1pgva_          12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR   91 (167)
T ss_dssp             TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred             hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence            35689999999975 46521    223566778999999999999742    334566789999999999999742    


Q ss_pred             -CCCCCCCCCCccccccCCcc
Q 040392           74 -IPRGGPFRNFSVESFEGNEL   93 (470)
Q Consensus        74 -~~~~~~l~~l~~l~~~~n~~   93 (470)
                       ...+...++|+.|++++|.+
T Consensus        92 l~~aL~~n~sL~~L~l~~n~~  112 (167)
T d1pgva_          92 LLRSTLVTQSIVEFKADNQRQ  112 (167)
T ss_dssp             HHHHTTTTCCCSEEECCCCSS
T ss_pred             HHHHHHhCCcCCEEECCCCcC
Confidence             11245567899999988865


No 109
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.33  E-value=0.0023  Score=52.22  Aligned_cols=67  Identities=15%  Similarity=0.125  Sum_probs=51.9

Q ss_pred             ccCCCCCCcEeeCcCCcCCC----CCCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceecCCcccc
Q 040392            5 EIGGLKNLEYLFLGYNRLQG----PIPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNLSFNKLE   71 (470)
Q Consensus         5 ~~~~l~~l~~l~l~~n~l~~----~~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l~~N~l~   71 (470)
                      .+.+.++|+.|+|++|.+..    .+...+...+.|+.|+|++|.|++.    +-..+...++|+.|++++|.+.
T Consensus        39 ~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~  113 (167)
T d1pgva_          39 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS  113 (167)
T ss_dssp             HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC
T ss_pred             HHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCC
Confidence            35567889999999999873    2223455678999999999999843    2245777899999999999765


No 110
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=93.78  E-value=0.006  Score=49.47  Aligned_cols=87  Identities=14%  Similarity=0.144  Sum_probs=59.7

Q ss_pred             CCCCCCcEeeCcC-CcCCCC----CCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceecCCcccccc----
Q 040392            7 GGLKNLEYLFLGY-NRLQGP----IPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNLSFNKLEGE----   73 (470)
Q Consensus         7 ~~l~~l~~l~l~~-n~l~~~----~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l~~N~l~~~----   73 (470)
                      .+.++|+.|+|++ |.++..    +-..+...++|+.|+|++|.++..    +-..+...+.|+.+++++|.+...    
T Consensus        14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~   93 (166)
T d1io0a_          14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA   93 (166)
T ss_dssp             TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred             hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence            4678999999998 456521    223456788999999999998743    223456788999999999998632    


Q ss_pred             -CCCCCCCCCCccccc--cCCcc
Q 040392           74 -IPRGGPFRNFSVESF--EGNEL   93 (470)
Q Consensus        74 -~~~~~~l~~l~~l~~--~~n~~   93 (470)
                       ...+...++|+.+++  .+|++
T Consensus        94 l~~~l~~~~~L~~l~L~l~~n~i  116 (166)
T d1io0a_          94 LVEALQSNTSLIELRIDNQSQPL  116 (166)
T ss_dssp             HHHGGGGCSSCCEEECCCCSSCC
T ss_pred             HHHHHHhCccccEEeeccCCCcC
Confidence             123355667776555  34444


No 111
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=92.31  E-value=0.0063  Score=49.36  Aligned_cols=88  Identities=15%  Similarity=0.114  Sum_probs=61.2

Q ss_pred             cCCCCCCcEeeCcCCcCCCC----CCccccCCCCCCEEeccCCcCCCC----CcccccCCCCCCceec--CCcccccc--
Q 040392            6 IGGLKNLEYLFLGYNRLQGP----IPDSFGDLISLKFLNLSNNNLSGA----IPASLEKLSYLENLNL--SFNKLEGE--   73 (470)
Q Consensus         6 ~~~l~~l~~l~l~~n~l~~~----~p~~~~~l~~L~~l~l~~n~i~~~----~~~~~~~l~~L~~l~l--~~N~l~~~--   73 (470)
                      +...++|+.|+|++|.++..    +-..+...++|+.+++++|.++..    +-..+...++|+.++|  ++|.+...  
T Consensus        42 l~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~  121 (166)
T d1io0a_          42 LKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVE  121 (166)
T ss_dssp             HTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHH
T ss_pred             HhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHH
Confidence            45778999999999998743    223455678999999999998743    2256778899987555  57777531  


Q ss_pred             ---CCCCCCCCCCccccccCCcc
Q 040392           74 ---IPRGGPFRNFSVESFEGNEL   93 (470)
Q Consensus        74 ---~~~~~~l~~l~~l~~~~n~~   93 (470)
                         ...+...++|+.|++..|..
T Consensus       122 ~~La~~L~~n~~L~~L~l~~~~~  144 (166)
T d1io0a_         122 MEIANMLEKNTTLLKFGYHFTQQ  144 (166)
T ss_dssp             HHHHHHHHHCSSCCEEECCCSSH
T ss_pred             HHHHHHHHhCCCcCEEeCcCCCC
Confidence               11123567788888765543


No 112
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=67.34  E-value=9.7  Score=32.84  Aligned_cols=133  Identities=14%  Similarity=0.054  Sum_probs=72.4

Q ss_pred             ecccCceEEEEEEeCCCcEEEEEEeecccchhhhhHHHHHHHHhcCCCCcceeEEeeec---------------------
Q 040392          181 IGRGGFGSVYKARLGDGMEVAVKVFNLQCGRALKGFDVECEMMKSIRHRNLIKVISTCS---------------------  239 (470)
Q Consensus       181 ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~~~~~---------------------  239 (470)
                      +..+|.+.|+-+.. ++..+++|.-.   ....+.+-.|+...=.+..|..+-+. .+.                     
T Consensus        76 ~s~~Gs~Gv~FV~~-e~gaiVlK~s~---tta~E~y~~eLAr~LGvpvPqmRvI~-~~~~E~~~~~~~~l~~~e~d~~I~  150 (342)
T d1cjaa_          76 RSEKGTEGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRVIT  150 (342)
T ss_dssp             ECCSTTSCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCHHH
T ss_pred             EeecCCceEEEEEc-CCceEEEecCC---chHHHHHHHHHHHHhCCCCCceEEec-CCCHHHHHHHHHHhcCCChhHHHH
Confidence            34556666776755 35567787632   23334455555555566777754433 211                     


Q ss_pred             --cCCeeeEEEecCCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeeecC-CCCCCeeeCCCC-CeEE
Q 040392          240 --NEEFKALVLEYMPHGSLEKYMYSSN-YILDIFQRLNIMIDVASALEYLHFGYSAPIIHCD-LKPSNVLLDDNM-VAHL  314 (470)
Q Consensus       240 --~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~d-lkp~Nill~~~~-~~kl  314 (470)
                        -.....++|||++|.+|.+.-.... ......... -+-.|+--=.+++.....++.+++ =.+.|++++.++ .+..
T Consensus       151 sel~~A~~liMeYvpG~~l~e~~~~~a~~~fs~~~l~-~LGkIiaFDifInN~DR~PL~Wrn~GN~~Niml~~n~~~~~~  229 (342)
T d1cjaa_         151 TLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQ-QLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVP  229 (342)
T ss_dssp             HHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHH-HHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEE
T ss_pred             HHHhcccceeeeccCCccccccccccchhhhcHHHHH-HhhhHHHHHHHHcCCccccccccCCCCccceEEecCCcEEEE
Confidence              1235678999999877654431111 011222211 111222223457766666777763 288999998766 6666


Q ss_pred             eeecc
Q 040392          315 SDFSI  319 (470)
Q Consensus       315 ~Dfg~  319 (470)
                      +|=|.
T Consensus       230 IDs~i  234 (342)
T d1cjaa_         230 IDSKI  234 (342)
T ss_dssp             CSCCC
T ss_pred             ecCCc
Confidence            66443


No 113
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.54  E-value=15  Score=24.21  Aligned_cols=28  Identities=21%  Similarity=0.139  Sum_probs=24.0

Q ss_pred             HHHhhccCCCccCCCCHHHHHHHHHHHH
Q 040392          425 NLAMECTVESPEQRINAREIVAKLLKIR  452 (470)
Q Consensus       425 ~l~~~cl~~dP~~Rps~~el~~~L~~i~  452 (470)
                      .||..++...|++|.|..||.+.+++--
T Consensus         3 ~LI~~Ai~~sp~~~ltL~eIy~~i~~~f   30 (75)
T d1kq8a_           3 ALITMAIRDSAGGRLTLAEINEYLMGKF   30 (75)
T ss_dssp             HHHHHHHTTSSSSCBCHHHHHHHHHHHC
T ss_pred             HHHHHHHHhCCCCCccHHHHHHHHHHhC
Confidence            5777888889999999999999998643


No 114
>d1e7ua4 d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (PI3K), catalytic domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=25.63  E-value=13  Score=33.00  Aligned_cols=25  Identities=16%  Similarity=0.178  Sum_probs=22.2

Q ss_pred             cCCCCCCeeeCCCCCeEEeeecccc
Q 040392          297 CDLKPSNVLLDDNMVAHLSDFSIAK  321 (470)
Q Consensus       297 ~dlkp~Nill~~~~~~kl~Dfg~a~  321 (470)
                      ||=+++|||++.+|++.=+|||..-
T Consensus       220 gDRH~~NILi~~~G~l~HIDFG~il  244 (369)
T d1e7ua4         220 GDRHNDNIMISETGNLFHIDFGHIL  244 (369)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             CCCCCCeeEEeCCCCEEecchhhhh
Confidence            5778999999999999999999875


Done!