BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040394
(691 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/703 (68%), Positives = 567/703 (80%), Gaps = 31/703 (4%)
Query: 1 MKLISLLQRHVSRTKKPKLQLRFFSYTN-QQTPTQHELDQTFASFHSLPSIPCLNLLGLC 59
MK ISLL RH LQ R + T Q+TP E+D+T AS S+ S PC +LLG+C
Sbjct: 1 MKRISLLHRH--------LQWRNLTVTALQRTP---EIDRTIASIQSISSNPCFSLLGIC 49
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
K+ SL+ HALL+V GL+ D C TKLVS+YGSFGHV+ AR +FD + NPD YS++VMI
Sbjct: 50 KTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMI 109
Query: 119 RWYFLNDLYKDIVEFYKC-MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG 177
RWYFLND Y +IV+FY +RK L E+DN VFS VLKAC ELR+ DEG K+HC+IVKVG
Sbjct: 110 RWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGS 169
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
PDSFVLTGLVDMYAKCR++ SR+VFDE LD+NVV WTSMI GYVQNDC +EGLVLFNRM
Sbjct: 170 PDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRM 229
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
REG VEGNQ TLGSLVTAC KL ALHQGKW+HGY++K G ++NS LVT LLD+Y KCG+I
Sbjct: 230 REGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDI 289
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
RDA SVFDEL +IDLVSWTAMIVGY Q GYP +ALKLFTD++W D PN VT +SVLSA
Sbjct: 290 RDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSAC 349
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
AQ G+LNMGR VH LGI+LG ED T NALVDMYAKCH+I DARY+FET +KDVIAWNS
Sbjct: 350 AQTGSLNMGRSVHCLGIKLGSEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNS 409
Query: 418 IISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
IISG D+V PDA+TLVSV+SACAS+GA +VGSSLH Y+ K G
Sbjct: 410 IISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAG 469
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
LLS +VYVGTALLNFYAKCGDA+SAR++FD M EKNT+TWSAMIGGYG+QGD SL LF
Sbjct: 470 LLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELF 529
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
DML E+++PNEVIFTTILSACSH+GM+GEGW+ F +MC+ + FVPSMKHY CMVDLLAR
Sbjct: 530 GDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLLAR 589
Query: 581 AGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
AGRLEEAL+F+E +PI+PDVSL GAFLHGC L+SRFDLGEV +++MLELHPDKACYYVL+
Sbjct: 590 AGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYVLM 649
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFS 683
SNLYAS+GRW + NQV ELMKQRGL+K PG SLVD++ +NDFS
Sbjct: 650 SNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIETSNDFS 692
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/665 (66%), Positives = 526/665 (79%), Gaps = 20/665 (3%)
Query: 47 LPSIPCLN--LLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVF 103
+P P L+ LC + +L HA L+V GLT D C+TKLVS+YGSFG + AR VF
Sbjct: 1 MPLPPILHNFFYSLCDNINTLMEMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVF 60
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
D++P+PDF S++V+IRWYFLN ++DIV FY MR LKE DN VFS VLKAC E R+ D
Sbjct: 61 DTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFD 120
Query: 164 EGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
EG KVHC+IVK G PDSFV TGLVDMYAKC +I SR VFDE LD+NV SW+SMIAGYVQ
Sbjct: 121 EGRKVHCQIVKFGNPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQ 180
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
N+ AQ+GLVLFNRMRE +E NQITLG LV AC KL ALHQGKWLHGY++K GIE+ S+L
Sbjct: 181 NNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYL 240
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
VTALLD+Y KCG +RDARSVFDEL ID+VSWTAMIVGYTQ+G P++ALKLF K+
Sbjct: 241 VTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAV 300
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYI 403
PN VTIASV S+ +QL NLN+GR +H L I+LG D V N+LVD YAKC + DARY+
Sbjct: 301 LPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPIVTNSLVDFYAKCQMNRDARYV 360
Query: 404 FETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAV 446
FET S++DV+AWNSIIS N V PDAVTLVSV+SACASL A+
Sbjct: 361 FETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNAL 420
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
QVGSS HAY+ K+GLLSSNVYVGTALL FYAKCGDA+SAR++FD M +K+TVTWSAMI G
Sbjct: 421 QVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISG 480
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
YG+QG+G GSL++F DML E++PNE IFT+ILSACSHTGM+GEGW+ F +C+D+ VP
Sbjct: 481 YGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVP 540
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
S KHY CMVDLLARAGRL+EAL+F++ MP++PDVSLFGAFLHGCGL+SRFDLGE+ IK+M
Sbjct: 541 STKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRM 600
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFSR 686
LELHP ACYYVL+ NLYASD RW +V QVRELMKQRGL K+PGCSL+++D+ +DFSFSR
Sbjct: 601 LELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMDVDHDFSFSR 660
Query: 687 VVSLA 691
SLA
Sbjct: 661 AASLA 665
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 817 bits (2111), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/658 (60%), Positives = 499/658 (75%), Gaps = 27/658 (4%)
Query: 47 LPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSM 106
+P P ++L +CK ++K HA LI+ G D T L+S+Y SFG +++AR++F +
Sbjct: 38 VPLPPTIHLSRICKHPTTVKTLHASLIISGHPPD---TTLISLYASFGFLRHARTLFHRL 94
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE-HDNFVFSKVLKACCELRDIDEG 165
P+P +SF+++IRW+FLND++ +V FY R L +D VFS +LK +LRDI
Sbjct: 95 PSPTHHSFKLIIRWHFLNDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLT 154
Query: 166 MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
K+HC I+K DSFVLT LVD Y+KC + +R+VFDE D++VVSWTSMI YVQN+
Sbjct: 155 TKLHCNILKSNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNE 214
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
CA+EGL+LFNRMREGF++GN T+GSLVTAC KL LHQGKW+HGY++K GIEINS+L T
Sbjct: 215 CAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLAT 274
Query: 286 ALLDMYVKCGNIRDARSVFDELC------SIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+LL+MYVKCG+I DARSVFDE DLV WTAMIVGYTQ GYP AL+LFTDKK
Sbjct: 275 SLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKK 334
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
W PN VT+AS+LSA AQL N+ MG+++H L ++ GL+D ++ N+LVDMYAKC +I D
Sbjct: 335 WYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIPD 394
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNVS-----------------PDAVTLVSVISACAS 442
A Y+F TT +KDV++WNS+ISG + S PDAVT+V V+SACAS
Sbjct: 395 AHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACAS 454
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
+GA Q+G SLH ++ K GL+SS++YVGTALLNFYAKCGDA SARMVFD M EKN VTW+A
Sbjct: 455 VGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAA 514
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MIGG GMQGDG GSLALF DML EE+ PNEV+FTT+L+ACSH+GMV EG F MC++
Sbjct: 515 MIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKEL 574
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
FVPSMKHY CMVDLLARAG L+EAL+F++ MP++P V +FGAFLHGCGL+S FD GEV
Sbjct: 575 NFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVA 634
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIAN 680
I++MLELHPD+ACYYVL+SNLYASDGRW V +VRE++KQRGL+K PG SLV++D+ N
Sbjct: 635 IRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMDVNN 692
>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
[Cucumis sativus]
Length = 1830
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/632 (61%), Positives = 482/632 (76%), Gaps = 42/632 (6%)
Query: 64 SLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+L FH LLIV GL N C+TKLV +YG+ G V+ AR VFD MPNPDFY+++VMIRWYF
Sbjct: 1135 TLIKFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYF 1194
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV 182
LNDL+ D++ FY MR +E DN +FS +LKAC ELR+I EG KVHC+IVKVGGPDSFV
Sbjct: 1195 LNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGPDSFV 1254
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+TGL+DMY KC + S VF+E +DKNVVSWTSMIAGYVQN+CA+EGLVLFNRMR+ V
Sbjct: 1255 MTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALV 1314
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
E N TLGS++ A KLRALHQGKW+HGY +K E++S L T LDMYVKCG RDAR
Sbjct: 1315 ESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDARM 1374
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
++DEL +IDLVSWT MIVGYTQ+ P+ L+LF D+ +D PN
Sbjct: 1375 IYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPN---------------- 1418
Query: 363 LNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
S +++ + +NAL+DMYAKCH I+DA IF EKDVI WNS+ISG
Sbjct: 1419 --------SALLQVFFQRVRFLNALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGY 1470
Query: 423 DDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
N ++PDA+TLVS +SA A+LGA+QVGSSLHAYS K GL SSN
Sbjct: 1471 AQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSN 1530
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+Y+GTALLNFYAKCGDA+SARMVFD+M KN +TWSAMIGGYG+QGDG GSL++FS+ML
Sbjct: 1531 LYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLK 1590
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
E+++PNEVIFTT+LSACS++GMV EG + F SM +D+ FVPSMKHY CMVDLLAR+G+L+
Sbjct: 1591 EDLKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQDYNFVPSMKHYACMVDLLARSGKLD 1650
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
EAL+F++ MP++ DVSL+GAFLHGCGLYSRFDLGEV++++ML+LH ++ACYYVLVSNLYA
Sbjct: 1651 EALDFIKKMPVQRDVSLYGAFLHGCGLYSRFDLGEVVVREMLQLHRNEACYYVLVSNLYA 1710
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
SDG+W +VN+VR+LM QRGL+K PG SLV+ +
Sbjct: 1711 SDGKWGQVNEVRDLMLQRGLNKVPGYSLVETN 1742
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/708 (57%), Positives = 502/708 (70%), Gaps = 43/708 (6%)
Query: 7 LQRHVSRTKKPKLQLR--FFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGS 64
+ R + T KP+L + + +Q P PS P L LC + S
Sbjct: 4 ISRVLRVTTKPRLHWNSLYHHHGQKQQP---------------PSPPTFYLSRLCTNLPS 48
Query: 65 LKAFHALLIVDGLTNDKCNTKLVSM-YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
LK HA ++ GLTND + + Y SFG +++AR +F+ +P D Y F+VMIR YFL
Sbjct: 49 LKTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLPTRDLYCFKVMIRAYFL 108
Query: 124 NDLYKDIVEFYKCMRKRLKE--HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF 181
ND +V Y+ MR L HD +FS V K+C E RD HC VK DSF
Sbjct: 109 NDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCHFVKSLPSDSF 168
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKN-VVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
VLT LVD YAK + + + FDE + + VVSWTSMI YVQNDCA+EGL LFNRMRE
Sbjct: 169 VLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREA 228
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
FV+GN+ T+GSLV+AC KL LHQGKW+HG+++K GI +NS+L T+LL+MYVKCGNI+DA
Sbjct: 229 FVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDA 288
Query: 301 RSVFDELCSI----DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
VFDE S DLVSWTAMIVGY+Q GYP AL+LF DKKW+ PN VT++S+LS+
Sbjct: 289 CKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSS 348
Query: 357 SAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
AQLGN MG+++H L ++ GL+D+ V NALVDMYAKC V++DAR +FE EKDV++WN
Sbjct: 349 CAQLGNSVMGKLLHGLAVKCGLDDHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWN 408
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
SIISG + SPDAVT+V ++SACASLG + +G S+H + K
Sbjct: 409 SIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKD 468
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
GL+ S++YVGTALLNFYAKCGDA++ARMVFD+M EKN VTW AMIGGYGMQGDG GSL L
Sbjct: 469 GLVVSSIYVGTALLNFYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTL 528
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F DML E V+PNEV+FTTIL+ACSH+GMVGEG + F MC + FVPSMKHY CMVD+LA
Sbjct: 529 FRDMLEELVEPNEVVFTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLA 588
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
RAG LEEAL+F+E MP++P VS+FGAFLHGCGL+SRF+LG IKKMLELHPD+ACYYVL
Sbjct: 589 RAGNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVL 648
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFSRV 687
VSNLYASDGRW V QVRE++KQRGL+K PGCS V++D+ ND S+++V
Sbjct: 649 VSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSSVEMDLQND-SYAKV 695
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/676 (57%), Positives = 493/676 (72%), Gaps = 20/676 (2%)
Query: 19 LQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLT 78
+++R F++T Q E D +S + S PC LL C + SL+ H +L +GL
Sbjct: 27 MRMRCFTFTTIQELNLPE-DNDESSLNYAASRPCFLLLSKCTNIDSLRQAHGVLTGNGLM 85
Query: 79 ND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
D TKLVS+YGSFG+ K AR VFD +P PDFY ++V++R Y LN+ ++++FY +
Sbjct: 86 GDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCYCLNNESFEVIKFYDLL 145
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIG 197
K +D+ VFSK LKAC E++D+D G K+HC+IVKV D+ VLTGL+DMYAKC +I
Sbjct: 146 MKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVPSFDNVVLTGLLDMYAKCGEIK 205
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
SS +VF++ +NVV WTSMIAGYV+ND +EGLVLFNRMRE V GN+ T G+LV AC
Sbjct: 206 SSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACT 265
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
KLRALHQGKW HG ++K GIE++S LVT+LLDMYVKCG+I +AR VF+E +DLV WTA
Sbjct: 266 KLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTA 325
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
MIVGYT +G ++AL LF PN VTIASVLS +GNL +GR +H L I++G
Sbjct: 326 MIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVG 385
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
+ D V NALV MYAKC+ DA+Y+FE SEKD++AWNSIISG N
Sbjct: 386 IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHR 445
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL-SSNVYVGTALLNFYAKC 479
V P+ VT+ S+ SACASLG++ +GSSLHAYS K G L SS+V+VGTALL+FYAKC
Sbjct: 446 MNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKC 505
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
GDA+SAR++FD + EKNT+TWSAMIGGYG QGD GSL LF +ML ++ +PNE FT++L
Sbjct: 506 GDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVL 565
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACSHTGMV EG K F SM +D+ F PS KHY CMVD+LARAG LE+AL+ +E MPI+PD
Sbjct: 566 SACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPD 625
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
V FGAFLHGCG++SRFDLGE++IKKML+LHPD A YYVLVSNLYASDGRW + +VR L
Sbjct: 626 VRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNL 685
Query: 660 MKQRGLSKSPGCSLVD 675
MKQRGLSK G S+++
Sbjct: 686 MKQRGLSKIAGHSIME 701
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/684 (57%), Positives = 489/684 (71%), Gaps = 20/684 (2%)
Query: 11 VSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHA 70
+S T++ R S+T + E + +S H S PC LL C + SL+ H
Sbjct: 7 LSPTRRFGFPPRCVSFTTIKELILTE-ENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHG 65
Query: 71 LLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD 129
+L +GL D TKLVS+YG FG+ K AR VFD +P PDFY ++VM+R Y LN +
Sbjct: 66 VLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVE 125
Query: 130 IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDM 189
+V+ Y + K +D+ VFSK LKAC EL+D+D G K+HC++VKV D+ VLTGL+DM
Sbjct: 126 VVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDM 185
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
YAKC +I S+ +VF++ +NVV WTSMIAGYV+ND +EGLVLFNRMRE V GN+ T
Sbjct: 186 YAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTY 245
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
G+L+ AC KL ALHQGKW HG ++K GIE++S LVT+LLDMYVKCG+I +AR VF+E
Sbjct: 246 GTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH 305
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+DLV WTAMIVGYT +G ++AL LF K + PN VTIASVLS + NL +GR V
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Query: 370 HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---- 425
H L I++G+ D V NALV MYAKC+ DA+Y+FE SEKD++AWNSIISG N
Sbjct: 366 HGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIH 425
Query: 426 -------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL-SSNVYVGTA 471
V+P+ VT+ S+ SACASLG++ VGSSLHAYS K G L SS+V+VGTA
Sbjct: 426 EALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTA 485
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
LL+FYAKCGD QSAR++FD + EKNT+TWSAMIGGYG QGD GSL LF +ML ++ +PN
Sbjct: 486 LLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPN 545
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
E FT+ILSAC HTGMV EG K F SM +D+ F PS KHY CMVD+LARAG LE+AL+ +
Sbjct: 546 ESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 605
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
E MPI+PDV FGAFLHGCG++SRFDLGE++IKKML+LHPD A YYVLVSNLYASDGRW
Sbjct: 606 EKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWN 665
Query: 652 RVNQVRELMKQRGLSKSPGCSLVD 675
+ +VR LMKQRGLSK G S ++
Sbjct: 666 QAKEVRNLMKQRGLSKIAGHSTME 689
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/662 (50%), Positives = 440/662 (66%), Gaps = 27/662 (4%)
Query: 42 ASFHSLPSIP-----CLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGH 95
A HS+ +P LL C + SL+A HA L+ GL + TKL+S Y + G
Sbjct: 11 ADAHSVEHLPHGGALLHRLLPACATLPSLRALHARLLAHGLLRALRARTKLLSCYAALGD 70
Query: 96 VKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE-HDNFVF-SKVL 153
+ AR V D P PD Y+++V + W+ + D + ++ MR+R E HD+ V S L
Sbjct: 71 LASARRVLDETPRPDPYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLAL 130
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS 213
KA D G ++HC VK GG D FV+ LVDMYAK D+ ++R+VFD L +NVVS
Sbjct: 131 KASVRSADFRYGRRLHCNAVKAGGADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVS 190
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
WTSM++G +QN A+EGL LFN MRE V ++ T+ S++ AC L +LHQG+W+HG ++
Sbjct: 191 WTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVI 250
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K G+ N + A+LDMYVKCG + DAR +FDEL +DLV WT MIVGYTQ+G P AL
Sbjct: 251 KHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALL 310
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL-GLEDYTVINALVDMYA 392
LF+DKK+ PN VTIA+VLSASAQL NL++GR++H++ ++L +E+ V+NALVDMYA
Sbjct: 311 LFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYA 370
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVS 435
KC +++A IF S KDV+ WNS+I+G +N SPDA+++V+
Sbjct: 371 KCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVN 430
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+SAC LG + +G H Y+ K+ LS NVYV TALLN Y KC D SA+ VF M E+
Sbjct: 431 ALSACVCLGDLLIGKCFHTYAVKRAFLS-NVYVNTALLNLYNKCADLPSAQRVFSEMSER 489
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
N+VTW AMIGGYGMQGD GS+ L + ML + +QPNEV+FT+ILS CSHTGMV G CF
Sbjct: 490 NSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMCF 549
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
SM + F PSMKHY CMVD+LARAG LEEALEF++ MP+ D+S++GAFLHGC L+SR
Sbjct: 550 DSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLHSR 609
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+ GE I +M+ LHPDK +YVL+SNLY S GRW + +R LM++RGL K PGCS V
Sbjct: 610 LEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYGRWDKSLAIRRLMQERGLVKLPGCSSVG 669
Query: 676 LD 677
L+
Sbjct: 670 LE 671
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/645 (50%), Positives = 435/645 (67%), Gaps = 26/645 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDG----LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
L LL C + SL+ HA L+ L + + TKL+S Y + G + AR VFD P
Sbjct: 33 LRLLPSCGTLPSLRVLHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPR 92
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL---KEHDNFVFSKVLKACCELRDIDEG 165
PD YS+ VM+ + + + V ++ MR+R + D+FV S LKAC D G
Sbjct: 93 PDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGYG 152
Query: 166 MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++HC+ VKVGG D FV+ LVDMYAK D+ +R+VF+ +NVVSWTSM++G VQN
Sbjct: 153 TRLHCDAVKVGGADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNG 212
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A +GL+LFN+MR+ V ++ T+ +++TAC+ L LHQG+W+HG ++K G+ NS +
Sbjct: 213 FAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISA 272
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
ALLDMYVKCG + DA+ VFDEL IDLV WT MIVGYTQ+G P AL+LF DKK+A+ P
Sbjct: 273 ALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVP 332
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIF 404
N VTIA+VLSASAQL +L++GR +H + ++LGL +YT V+NALVDMYAKC +++A IF
Sbjct: 333 NSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIF 392
Query: 405 ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQ 447
+ S KDV+AWNS++SG +N SPDA+++V +SA LG +
Sbjct: 393 GSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLL 452
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G S H Y+ K L SN+YV TALLN Y KCGD SAR VFD M ++N+VTW AMIGGY
Sbjct: 453 IGKSFHGYAVKHAFL-SNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGY 511
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GMQGD GS+ LF +ML + V PN+V FT+ILS CSHTGMV + F SM + F PS
Sbjct: 512 GMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPS 571
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
MKHY CMVD+LARAG LEEALEF++NMP++ D S++GAFLHGC L+SR GE IK+M+
Sbjct: 572 MKHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMM 631
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
LHP++ YVL+SNLY S+G W + +R M+++GL K PG S
Sbjct: 632 VLHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKGLVKLPGYS 676
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/674 (48%), Positives = 440/674 (65%), Gaps = 24/674 (3%)
Query: 26 YTNQQTPTQHELDQTFASFHSLPSIPCLN-LLGLCKSTGSLKAFHALLIVDGLTND-KCN 83
+ TP H +D S + P L+ LL C + SL+A HA L+ GL + +
Sbjct: 5 FRPSATPDAHSVDH-LPRASSPDANPLLHRLLPACTTLPSLRALHARLLAHGLLRGLRAH 63
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR--L 141
TKL+S Y + G + AR V D P+PD Y+++V + W+ + + V ++ MR+R
Sbjct: 64 TKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPA 123
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
++ D V S LKA D G ++HC++VK GG D FV+ LVDMYAK D+ ++R+
Sbjct: 124 EQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAGGGDLFVMNNLVDMYAKGGDLKNARK 183
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFD D+NVVSWTSM++G +QN A+EGLVLFN MR+ + ++ T+ S++ AC L +
Sbjct: 184 VFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGS 243
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
LHQG+ +HG ++K G+ N + A+LDMYVKCG DAR VFDEL +DLV WT MIVG
Sbjct: 244 LHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVG 303
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LED 380
YTQ+G P AL LF D K+ PN VTIA+VLSASAQL NL++GR +H + ++LG +E+
Sbjct: 304 YTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVEN 363
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V+NALVDMYAKC ++DA+ IF KDV+ WNS+I+G +N
Sbjct: 364 DVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRV 423
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
PDA+++V+ +SAC LG + +G H Y+ K +S N+YV TALLN Y KC D
Sbjct: 424 QGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMS-NIYVNTALLNLYNKCADLP 482
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
SA+ VF M ++NTVTW AMIGGYGMQGD GS+ LF++ML + +QPNE +FT+ILS CS
Sbjct: 483 SAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCS 542
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
HTGMV G KCF SM F PSMKHY CMVD+LARAG LEEALEF++ MP++ D S++
Sbjct: 543 HTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIW 602
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
AFLHGC L+SR + E + +M+ LHPD + V++SNLY S GRW + +R+LMK+R
Sbjct: 603 QAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKER 662
Query: 664 GLSKSPGCSLVDLD 677
GL K PGCS V L+
Sbjct: 663 GLVKLPGCSSVGLE 676
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/668 (48%), Positives = 436/668 (65%), Gaps = 24/668 (3%)
Query: 30 QTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND---KCNTKL 86
P H ++ + + + LL C + SL+A H L++ + TKL
Sbjct: 2 HPPAAHSVEHLARASAPRDASALVLLLPACGTLRSLRALHGRLLLLTSGLLRGIRARTKL 61
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR--LKEH 144
+S Y + G + AR V D P PD Y+++VM+ W + D V ++ MR+R
Sbjct: 62 LSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAAQ 121
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ V S LKAC D G ++HC++VK GG D FV+ LVDMYAK D+ ++R+VFD
Sbjct: 122 ADVVLSLALKACVRSADFRYGRRLHCDVVKAGGADGFVMNSLVDMYAKAGDLENARKVFD 181
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++NVVSWTSM++G +QN A+EGLVLFN MR+ V ++ T+ S++ ACA L LHQ
Sbjct: 182 RVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQ 241
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+W+HG ++K G+ NS + +LLDMY KC + DAR VFDEL +D+V WTAMIVGYTQ
Sbjct: 242 GRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQ 301
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTV 383
+ P AL+LF KK+ PN VTIA+V+SASAQL +L +GR VH++G++LG +E V
Sbjct: 302 NKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVV 361
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
NALVDMYAKC + +A IF KDV+AWNS+++G +N +
Sbjct: 362 RNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGI 421
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
SPDA+++V+ +SAC L + +G H Y+ K +S N+YV TALLN Y+KC D SA+
Sbjct: 422 SPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMS-NIYVNTALLNLYSKCADLPSAQ 480
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ M ++N+VTWSAMIGGYGMQGD GS+ LF++ML E + PNEV+FT+ILSACSHTG
Sbjct: 481 RVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTG 540
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
MV G + F SM R F PSMKHY CMVD++ARAG LEEALEF++NMPI+ +S++G+F
Sbjct: 541 MVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSF 600
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
LHGC L+SR + GE IKKM LHP+ +YVL+SNLY S GRW + +R M+++GL
Sbjct: 601 LHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLV 660
Query: 667 KSPGCSLV 674
K PGCS V
Sbjct: 661 KLPGCSSV 668
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/647 (50%), Positives = 433/647 (66%), Gaps = 26/647 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDG----LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
L LL C + SL+ HA L+ L + + TKL+S Y + G + AR VFD P
Sbjct: 66 LRLLPSCGTLLSLRVLHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTPR 125
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL---KEHDNFVFSKVLKACCELRDIDEG 165
PD YS+ M+ + + D V + MR+R + D+FV S LKAC + G
Sbjct: 126 PDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYG 185
Query: 166 MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+HC+ +KVGG D FV+ LVDMYAK D+ +R+VF+ D+NVVSWTSMI+G VQN
Sbjct: 186 RSLHCDAIKVGGADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNG 245
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A +GL+LFN+MR+ V ++ T+ +++TAC+ L LHQG+W+HG ++K G+ NS +
Sbjct: 246 FASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISA 305
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
ALLDMYVKCG + AR VFDEL IDLV WT MIVGYTQ+G P AL+LF DK++A+ P
Sbjct: 306 ALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAP 365
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIF 404
N VT A+VLSASAQL +L++G+ +H L ++LGL +Y V+ NALVDMYAKC +++A IF
Sbjct: 366 NSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIF 425
Query: 405 ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQ 447
S KDV+AWNS+ISG +N SPDA+++V+ +SA LG +
Sbjct: 426 GRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLL 485
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G S+H Y+ K + SN+YV TALLN Y KCGD SAR VFD M ++N+VTW AMIGGY
Sbjct: 486 IGKSIHGYAVKHAFV-SNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGY 544
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GMQGD GS+ LF +ML + V PN++ FT+ILS CSH+GMV G + F SM + F PS
Sbjct: 545 GMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPS 604
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
MKHY CMVD+LARAG LE+ALEF++NMP++ D S++GAFLHGC L+SR E IK+M+
Sbjct: 605 MKHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMM 664
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
LHP++ YVL+SNLY S+G W + +R M+++GL K PGCS V
Sbjct: 665 VLHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQEKGLVKLPGCSSV 711
>gi|255542118|ref|XP_002512123.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549303|gb|EEF50792.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 456
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 304/425 (71%), Positives = 346/425 (81%), Gaps = 17/425 (4%)
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
++AC ELRDIDEG K+HC+I+K G PDSFVLTGL D YAKC +I SR FDE LD+NVV
Sbjct: 11 IRACSELRDIDEGRKLHCQIIKAGPPDSFVLTGLTDFYAKCGEIECSRCAFDENLDRNVV 70
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
SWTSMI GYVQNDC EGL+LFNRMREG +EGNQ TLG LVTAC KL ALHQGK HGY
Sbjct: 71 SWTSMIVGYVQNDCPVEGLILFNRMREGLIEGNQFTLGILVTACTKLGALHQGKCFHGYA 130
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
+K G+++NS+L+TALLDMYVKCG IRDARSVFDEL SIDLVSWTAMIVGYTQS AL
Sbjct: 131 IKSGVQLNSYLMTALLDMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQSNLSYDAL 190
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYA 392
KLF DKKWA PN VTI S L+A A++GNLN+GR +H L I+LG + T++NALV MYA
Sbjct: 191 KLFLDKKWAGILPNDVTIVSALAACARMGNLNLGRSIHGLAIKLGFAEPTLMNALVHMYA 250
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISG----------LD-------DNVSPDAVTLVS 435
KCH+ DA Y+FET SEKDV++WNSIISG LD ++VSPDAVTLVS
Sbjct: 251 KCHMNRDASYLFETASEKDVVSWNSIISGCSQMGSPYEALDLFQRMRKESVSPDAVTLVS 310
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V SACASLGA+QVGSSLHAYS K+GLLSSNVYV TALL FYAKCGDA SAR +FD M+EK
Sbjct: 311 VFSACASLGALQVGSSLHAYSVKEGLLSSNVYVSTALLTFYAKCGDAGSARTIFDGMQEK 370
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
NTVTWSAMIGGYG+QGD GGSL++F+DML +E++PNEVIFTTILSACSHTGMVGEGW F
Sbjct: 371 NTVTWSAMIGGYGVQGDAGGSLSIFNDMLRQELKPNEVIFTTILSACSHTGMVGEGWNLF 430
Query: 556 YSMCR 560
SMC+
Sbjct: 431 ISMCQ 435
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 208/407 (51%), Gaps = 21/407 (5%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+ H +I G + T L Y G ++ +R FD + + S+ MI Y ND
Sbjct: 24 RKLHCQIIKAGPPDSFVLTGLTDFYAKCGEIECSRCAFDENLDRNVVSWTSMIVGYVQND 83
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLT 184
+ + + MR+ L E + F ++ AC +L + +G H +K G +S+++T
Sbjct: 84 CPVEGLILFNRMREGLIEGNQFTLGILVTACTKLGALHQGKCFHGYAIKSGVQLNSYLMT 143
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+DMY KC I +R VFDE ++VSWT+MI GY Q++ + + L LF + +
Sbjct: 144 ALLDMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQSNLSYDALKLFLDKKWAGILP 203
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N +T+ S + ACA++ L+ G+ +HG +K+G L+ AL+ MY KC RDA +F
Sbjct: 204 NDVTIVSALAACARMGNLNLGRSIHGLAIKLGFA-EPTLMNALVHMYAKCHMNRDASYLF 262
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ D+VSW ++I G +Q G P +AL LF + P+ VT+ SV SA A LG L
Sbjct: 263 ETASEKDVVSWNSIISGCSQMGSPYEALDLFQRMRKESVSPDAVTLVSVFSACASLGALQ 322
Query: 365 MGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG- 421
+G +H+ ++ GL + V AL+ YAKC AR IF+ EK+ + W+++I G
Sbjct: 323 VGSSLHAYSVKEGLLSSNVYVSTALLTFYAKCGDAGSARTIFDGMQEKNTVTWSAMIGGY 382
Query: 422 ----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
L + P+ V +++SAC+ G V G +L
Sbjct: 383 GVQGDAGGSLSIFNDMLRQELKPNEVIFTTILSACSHTGMVGEGWNL 429
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 246/646 (38%), Positives = 376/646 (58%), Gaps = 21/646 (3%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
P LL LC S L F L+I +GL ++ TKLVS++ FG + A VF + +
Sbjct: 79 PSAILLELCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDK 138
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ M++ Y N D V F+ MR + F+ +LK C + D+ +G ++H
Sbjct: 139 IDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIH 198
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
C+++ G + F +TG+V+MYAKCR + + ++FD ++++V W ++I+GY QN +
Sbjct: 199 CQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGK 258
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
L L RM+E + IT+ S++ A A + +L G+ +HGY ++ G E ++ TAL+
Sbjct: 259 TALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALV 318
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KCG++ AR +FD + +VSW +MI GY Q+G P A+++F +V
Sbjct: 319 DMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNV 378
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
T+ L A A LG++ GR VH L +L L D +V+N+L+ MY+KC + A IFE
Sbjct: 379 TVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENL 438
Query: 408 SEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGS 450
K +++WN++I G N + PD+ T+VSVI A A L +
Sbjct: 439 QHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAK 498
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H + L NV+V TAL++ YAKCG +AR +FD M E++ TW+AMI GYG
Sbjct: 499 WIHGLVIRT-CLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTH 557
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L LF M E ++PNEV F +LSACSH+G+V EG++ F SM +D+ P+M H
Sbjct: 558 GLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDH 617
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y MVDLL RA RL EA +F++ MPIEP +S+FGA L C ++ +LGE ++ +L
Sbjct: 618 YGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLD 677
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
PD Y+VL++N+YA+ W +V +VR M+++G+ K+PG S+V+L
Sbjct: 678 PDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVEL 723
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/646 (36%), Positives = 379/646 (58%), Gaps = 21/646 (3%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
P LL LC S L L+I +GL N+ TKLVS++ +G + A VF+ + +
Sbjct: 51 PAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK 110
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ M++ Y N + + F MR + + F+ +LK C + D+ G ++H
Sbjct: 111 LDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+++ + F +TG+V+MYAKCR I + ++FD ++++VSW ++IAG+ QN A+
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L L RM++ + ITL +++ A A + L GK +HGY ++ G ++ TAL
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KCG++ AR +FD + +VSW +M+ GY Q+G P+KA+ +F P V
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
TI L A A LG+L G+ VH +L L D +V+N+L+ MY+KC + A IF
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 408 SEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGS 450
+ + ++WN++I G N + PD+ T+VSVI A A L +
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H + L N++V TAL++ Y+KCG AR +FD + +++ +TW+AMI GYG
Sbjct: 471 WIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTH 529
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L LF M V+PN++ + +++SACSH+G+V EG + F SM +D+ PSM H
Sbjct: 530 GLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDH 589
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y MVDLL RAGR++EA +F+ENMPI P ++++GA L C ++ ++GE KK+ EL+
Sbjct: 590 YGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELN 649
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
PD+ Y+VL++N+YAS +W +V +VR+ M+++GL K+PGCS+V+L
Sbjct: 650 PDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVEL 695
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/646 (36%), Positives = 378/646 (58%), Gaps = 21/646 (3%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
P LL LC S L L+I +GL N+ TKLVS++ +G + A VF+ + +
Sbjct: 51 PAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDK 110
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ M++ Y N + + F MR + + F+ +LK C + D+ G ++H
Sbjct: 111 LDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIH 170
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+++ + F +TG+V+MYAKCR I + ++FD ++++VSW ++IAG+ QN A+
Sbjct: 171 GQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAK 230
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L L RM++ + ITL +++ A A + L GK +HGY ++ G ++ TAL
Sbjct: 231 KALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALA 290
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KCG++ AR +FD + +VSW +M+ GY Q+G P+KA+ +F P V
Sbjct: 291 DMYSKCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV 350
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
TI L A A LG+L G+ VH +L L D +V+N+L+ MY+KC + A IF
Sbjct: 351 TIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNL 410
Query: 408 SEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGS 450
+ + ++WN++I G N + PD+ T+VSVI A A L +
Sbjct: 411 NGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAK 470
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H + L N++V TAL++ Y+KCG AR +FD + +++ +TW+AMI GYG
Sbjct: 471 WIHGLIIRS-CLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTH 529
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L LF M V+PN++ + +++SACSH+G+V EG + F SM +D+ PSM H
Sbjct: 530 GLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDH 589
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y MVDLL RAGR++EA +F+ENMPI P ++++GA C ++ ++GE KK+ EL+
Sbjct: 590 YGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELN 649
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
PD+ Y+VL++N+YAS +W +V +VR+ M+++GL K+PGCS+V+L
Sbjct: 650 PDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVEL 695
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/573 (40%), Positives = 336/573 (58%), Gaps = 20/573 (3%)
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPD 179
Y N + + Y M++ D VF V+KAC D+ G KVH +I+ G D
Sbjct: 95 YVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESD 154
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
V T L MY KC + ++RQVFD ++VVSW ++IAGY QN E L LF+ M+
Sbjct: 155 VIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQV 214
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
++ N TL S++ CA L AL QGK +H Y ++ GIE + +V L++MY KCGN+
Sbjct: 215 NGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNT 274
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A +F+ + D+ SW A+I GY+ + +AL F + PN +T+ SVL A A
Sbjct: 275 AHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAH 334
Query: 360 LGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L L G+ +H IR G E V+ NALV+MYAKC + A +FE +K+V+AWN+I
Sbjct: 335 LFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAI 394
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
ISG + + PD+ +VSV+ ACA A++ G +H Y+ + G
Sbjct: 395 ISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF 454
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
SNV VGT L++ YAKCG+ +A+ +F+ M E++ V+W+ MI YG+ G G +LALFS
Sbjct: 455 -ESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFS 513
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
M + + + FT IL+ACSH G+V +G + F M D+ P ++HY C+VDLL RA
Sbjct: 514 KMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRA 573
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G L+EA ++NM +EPD +++GA L C ++ +LGE K + EL PD A YYVL+S
Sbjct: 574 GHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLS 633
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
N+YA RW V ++R++MK++G+ K PGCS+V
Sbjct: 634 NIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVV 666
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 242/450 (53%), Gaps = 22/450 (4%)
Query: 198 SSRQVFDET-LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+++ F +T + N V W I GYV+N + L L+ +M+ + +++ S++ AC
Sbjct: 71 ANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKAC 130
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
L G+ +H I+ G E + + TAL MY KCG++ +AR VFD + D+VSW
Sbjct: 131 GSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWN 190
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
A+I GY+Q+G P +AL LF++ + PN T+ SV+ A L L G+ +H IR
Sbjct: 191 AIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRS 250
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
G+E D V+N LV+MYAKC + A +FE +DV +WN+II G N
Sbjct: 251 GIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFF 310
Query: 426 -------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ P+++T+VSV+ ACA L A++ G +H Y+ + G S++V VG AL+N YAK
Sbjct: 311 NRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDV-VGNALVNMYAK 369
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG+ SA +F+ M +KN V W+A+I GY G +LALF +M + ++P+ ++
Sbjct: 370 CGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSV 429
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L AC+H + +G + R F ++ +VD+ A+ G + A + E MP E
Sbjct: 430 LPACAHFLALEQGKQIHGYTIRS-GFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP-EQ 487
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
DV + + G++ + + KM E
Sbjct: 488 DVVSWTTMILAYGIHGHGEDALALFSKMQE 517
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 238/478 (49%), Gaps = 24/478 (5%)
Query: 53 LNLLGLCKSTGSLKA---FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN 108
L+++ C S L+A H +I G +D T L SMY G ++ AR VFD MP
Sbjct: 124 LSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPK 183
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D S+ +I Y N + + + M+ + ++ V+ C L +++G ++
Sbjct: 184 RDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQI 243
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
HC ++ G D V+ GLV+MYAKC ++ ++ ++F+ ++V SW ++I GY N
Sbjct: 244 HCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQH 303
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E L FNRM+ ++ N IT+ S++ ACA L AL QG+ +HGY ++ G E N + AL
Sbjct: 304 HEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNAL 363
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++MY KCGN+ A +F+ + ++V+W A+I GY+Q G+P +AL LF + + P+
Sbjct: 364 VNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDS 423
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFET 406
I SVL A A L G+ +H IR G E V+ LVD+YAKC + A+ +FE
Sbjct: 424 FAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFER 483
Query: 407 TSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
E+DV++W ++I + D + ++++AC+ G V G
Sbjct: 484 MPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQG 543
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
L+ + L++ + G A + M E + W A++G
Sbjct: 544 LQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGA 601
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 196/376 (52%), Gaps = 15/376 (3%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNPD 110
C +LL L + K H I G+ +D LV+MY G+V A +F+ MP D
Sbjct: 231 CAHLLALEQG----KQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRD 286
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ +I Y LN + + + F+ M+ R + ++ VL AC L +++G ++H
Sbjct: 287 VASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG 346
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
++ G + V LV+MYAKC ++ S+ ++F+ KNVV+W ++I+GY Q+ E
Sbjct: 347 YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHE 406
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L LF M+ ++ + + S++ ACA AL QGK +HGY ++ G E N + T L+D
Sbjct: 407 ALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVD 466
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+Y KCGN+ A+ +F+ + D+VSWT MI+ Y G+ + AL LF+ + +H+
Sbjct: 467 IYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIA 526
Query: 350 IASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
++L+A + G ++ G M G+ LE Y LVD+ + + +A I
Sbjct: 527 FTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYA---CLVDLLGRAGHLDEANGII 583
Query: 405 ETTS-EKDVIAWNSII 419
+ S E D W +++
Sbjct: 584 KNMSLEPDANVWGALL 599
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/647 (36%), Positives = 379/647 (58%), Gaps = 23/647 (3%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
P LL LC S L L+I +G N+ TKL+S++ F + A VF+ + +
Sbjct: 46 PSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHK 105
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ M++ Y N +D V FY+ MR + F+ +L+ E D+ G ++H
Sbjct: 106 LDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIH 165
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
++ G + F +T +V++YAKCR I + ++F+ +++VSW +++AGY QN A+
Sbjct: 166 GMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFAR 225
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ + +M+E + + ITL S++ A A L+AL G+ +HGY + G E ++ TA+L
Sbjct: 226 RAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAML 285
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
D Y KCG++R AR VF + S ++VSW MI GY Q+G ++A F P +V
Sbjct: 286 DTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNV 345
Query: 349 TIASVLSASAQLGNLNMGRMVHSL--GIRLGLEDYTVINALVDMYAKCHVIADARYIFET 406
++ L A A LG+L GR VH L ++G D +V+N+L+ MY+KC + A +F
Sbjct: 346 SMMGALHACANLGDLERGRYVHRLLDEKKIGF-DVSVMNSLISMYSKCKRVDIAASVFGN 404
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
K V+ WN++I G N + PD+ TLVSVI+A A L +
Sbjct: 405 LKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQA 464
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H + + L+ NV+V TAL++ +AKCG Q+AR +FD M+E++ +TW+AMI GYG
Sbjct: 465 KWIHGLAIRT-LMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGT 523
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L LF++M N V+PNE+ F ++++ACSH+G+V EG F SM ++ P+M
Sbjct: 524 NGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMD 583
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY MVDLL RAGRL++A +F+++MP++P +++ GA L C ++ +LGE ++ +L
Sbjct: 584 HYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDL 643
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
PD Y+VL++N+YAS W +V +VR M+++G+ K+PGCSLV+L
Sbjct: 644 DPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVEL 690
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/614 (38%), Positives = 362/614 (58%), Gaps = 20/614 (3%)
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+ L+SM+ FG + A VF M D +S+ V++ Y + + + Y M
Sbjct: 130 RLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV 189
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
D + F VL+ C L D+ G +VH +++ G D V+ L+ MY KC DI S+
Sbjct: 190 GIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA 249
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R VFD ++ +SW +MI+GY +ND EGL LF MRE FV+ + +T+ S+++AC L
Sbjct: 250 RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
G+ +HGY++K G + +L+ M+ G +A VF ++ DLVSWTAMI
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMI 369
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY ++G P+KA++ +T + P+ +TIASVLSA A LG L+ G M+H R GL
Sbjct: 370 SGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLT 429
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y ++ N+L+DMY+KC I A +F K+VI+W SII GL N
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM 489
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P++VTLVSV+SACA +GA+ G +HA++ + GL + ++ ALL+ Y +CG
Sbjct: 490 ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGL-GFDGFLPNALLDMYVRCGRM 548
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ A F++ EK+ +W+ ++ GY QG GG ++ LF M+ +V P+E+ FT++L AC
Sbjct: 549 EPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCAC 607
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S +GMV +G + F SM F P++KHY +VDLL RAGRLE+A EF++ MPI+PD ++
Sbjct: 608 SRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAI 667
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L+ C +Y +LGE+ + + E+ YY+L+ NLYA G+W V +VR++M++
Sbjct: 668 WGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRE 727
Query: 663 RGLSKSPGCSLVDL 676
L+ PGCS V++
Sbjct: 728 NRLTVDPGCSWVEV 741
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 201/390 (51%), Gaps = 28/390 (7%)
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
++ L+ + M+E V + T +L+ C RA +G +H Y+ K + L AL
Sbjct: 76 EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNAL 135
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L M+V+ G++ +A VF ++ DL SW ++ GY ++GY D+AL L+ W P+
Sbjct: 136 LSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDV 195
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T VL L +L GR VH IR G E D V+NAL+ MY KC I AR +F+
Sbjct: 196 YTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDR 255
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+D I+WN++ISG +N V PD +T+ SVISAC +LG ++G
Sbjct: 256 MPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H Y K G ++ V V +L+ ++ G A MVF M K+ V+W+AMI GY
Sbjct: 316 REVHGYVIKTGFVAE-VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G ++ ++ M +E V P+E+ ++LSAC+ G++ +G M +F +
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFADRTGLT 429
Query: 570 HYV----CMVDLLARAGRLEEALEFMENMP 595
YV ++D+ ++ +++ALE +P
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 200/437 (45%), Gaps = 33/437 (7%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H +I G + N L+ M+ S G A VF M D S+ MI Y N
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT 184
L + VE Y M D + VL AC L +D+G+ +H E G S+V+
Sbjct: 376 GLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLH-EFADRTGLTSYVIV 434
Query: 185 G--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
L+DMY+KCR I + +VF +KNV+SWTS+I G N + E L F +M +
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-L 493
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ N +TL S+++ACA++ AL GK +H + L+ G+ + L ALLDMYV+CG + A +
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F+ C D+ SW ++ GY Q G A++LF +D P+ +T S+L A ++ G
Sbjct: 554 QFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGM 612
Query: 363 LNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ G M H I L+ Y ++VD+ + + DA +
Sbjct: 613 VTDGLEYFESMEHKFHIAPNLKHYA---SVVDLLGRAGRLEDAYEFIKKMP--------- 660
Query: 418 IISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
+ PD ++++AC V++G + + S Y+ L N YA
Sbjct: 661 --------IDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYI--LLCNLYA 710
Query: 478 KCGDAQSARMVFDAMRE 494
G V MRE
Sbjct: 711 DSGKWDEVARVRKIMRE 727
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 236/614 (38%), Positives = 362/614 (58%), Gaps = 20/614 (3%)
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+ L+SM+ FG + A VF M D +S+ V++ Y + + + Y M
Sbjct: 130 RLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWV 189
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
D + F VL+ C L D+ G +VH +++ G D V+ L+ MY KC DI S+
Sbjct: 190 GIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA 249
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R VFD ++ +SW +MI+GY +ND EGL LF MRE FV+ + +T+ S+++AC L
Sbjct: 250 RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEAL 309
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
G+ +HGY++K G + +L+ M+ G +A VF ++ DLVSWTAMI
Sbjct: 310 GDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMI 369
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY ++G P+KA++ +T + P+ +TIASVLSA A LG L+ G M+H R GL
Sbjct: 370 SGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLT 429
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y ++ N+L+DMY+KC I A +F K+VI+W SII GL N
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM 489
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P++VTLVSV+SACA +GA+ G +HA++ + GL + ++ ALL+ Y +CG
Sbjct: 490 ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGL-GFDGFLPNALLDMYVRCGRM 548
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ A F++ EK+ +W+ ++ GY QG GG ++ LF M+ +V P+E+ FT++L AC
Sbjct: 549 EPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCAC 607
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S +GMV +G + F SM F P++KHY +VDLL RAGRLE+A EF++ MPI+PD ++
Sbjct: 608 SRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAI 667
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L+ C +Y +LGE+ + + E+ YY+L+ NLYA G+W V +VR++M++
Sbjct: 668 WGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRE 727
Query: 663 RGLSKSPGCSLVDL 676
L+ PGCS V++
Sbjct: 728 NRLTVDPGCSWVEV 741
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/390 (32%), Positives = 201/390 (51%), Gaps = 28/390 (7%)
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
++ L+ + M+E V + T +L+ C RA +G +H Y+ K + L AL
Sbjct: 76 EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNAL 135
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L M+V+ G++ +A VF ++ DL SW ++ GY ++GY D+AL L+ W P+
Sbjct: 136 LSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDV 195
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T VL L +L GR VH IR G E D V+NAL+ MY KC I AR +F+
Sbjct: 196 YTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDR 255
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+D I+WN++ISG +N V PD +T+ SVISAC +LG ++G
Sbjct: 256 MPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLG 315
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H Y K G ++ V V +L+ ++ G A MVF M K+ V+W+AMI GY
Sbjct: 316 REVHGYVIKTGFVAE-VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEK 374
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G ++ ++ M +E V P+E+ ++LSAC+ G++ +G M +F +
Sbjct: 375 NGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-----IMLHEFADRTGLT 429
Query: 570 HYV----CMVDLLARAGRLEEALEFMENMP 595
YV ++D+ ++ +++ALE +P
Sbjct: 430 SYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 200/437 (45%), Gaps = 33/437 (7%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H +I G + N L+ M+ S G A VF M D S+ MI Y N
Sbjct: 316 REVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKN 375
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT 184
L + VE Y M D + VL AC L +D+G+ +H E G S+V+
Sbjct: 376 GLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLH-EFADRTGLTSYVIV 434
Query: 185 G--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
L+DMY+KCR I + +VF +KNV+SWTS+I G N + E L F +M +
Sbjct: 435 ANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-L 493
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ N +TL S+++ACA++ AL GK +H + L+ G+ + L ALLDMYV+CG + A +
Sbjct: 494 KPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWN 553
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F+ C D+ SW ++ GY Q G A++LF +D P+ +T S+L A ++ G
Sbjct: 554 QFNS-CEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGM 612
Query: 363 LNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ G M H I L+ Y ++VD+ + + DA +
Sbjct: 613 VTDGLEYFESMEHKFHIAPNLKHYA---SVVDLLGRAGRLEDAYEFIKKMP--------- 660
Query: 418 IISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
+ PD ++++AC V++G + + S Y+ L N YA
Sbjct: 661 --------IDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYI--LLCNLYA 710
Query: 478 KCGDAQSARMVFDAMRE 494
G V MRE
Sbjct: 711 DSGKWDEVARVRKIMRE 727
>gi|297738048|emb|CBI27249.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 244/593 (41%), Positives = 346/593 (58%), Gaps = 79/593 (13%)
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
K+H +V G D T LV +Y + +R +FD + ++ SW MI Y ND
Sbjct: 104 KIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLND 163
Query: 226 CAQEGLVLFN-RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E + +N R+R+ E + + ++ AC++LR +G+ LH I+K+G +S ++
Sbjct: 164 SYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG-SPDSFVL 222
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
T L+DMY KC + D+R VFDE+ ++V WT+MIVGY Q+ + L LF +
Sbjct: 223 TGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVE 282
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
N T+ S+++A +LG L+ G+ VH I+ G + + ++ L+D+Y KC I DA +
Sbjct: 283 GNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSV 342
Query: 404 FETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAV 446
F+ S D+++W ++I G ++ P+ VT SV+SACA G++
Sbjct: 343 FDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSL 402
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG- 505
+G S+H K G S + AL++ YAKC AR VF+ + +K+ + W+++I
Sbjct: 403 NMGRSVHCLGIKLG--SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISG 460
Query: 506 -------------------------------------------------GYGMQG----- 511
GY ++
Sbjct: 461 YTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSG 520
Query: 512 -DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
D SL LF DML E+++PNEVIFTTILSACSH+GM+GEGW+ F +MC+ + FVPSMKH
Sbjct: 521 RDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKH 580
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVDLLARAGRLEEAL+F+E +PI+PDVSL GAFLHGC L+SRFDLGEV +++MLELH
Sbjct: 581 YACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELH 640
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFS 683
PDKACYYVL+SNLYAS+GRW + NQV ELMKQRGL+K PG SLVD++ +NDFS
Sbjct: 641 PDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDIETSNDFS 693
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 242/682 (35%), Positives = 385/682 (56%), Gaps = 27/682 (3%)
Query: 20 QLRFFSYTNQQTPTQHELDQTFASFHSLPS----IPCLNLLGLCKSTGSLKAFHALLIVD 75
QL S +Q P + + +P+ P LL C S L+ L+ +
Sbjct: 4 QLVHVSTVSQIPPISSSHRHFLSQRNYIPANVYEHPAALLLERCSSLKELRHILPLIFKN 63
Query: 76 GLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYKDIVEF 133
GL + TKLVS++ +G V A VF+ + + M++ + ++DL K + +F
Sbjct: 64 GLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKAL-KF 122
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
+ MR E + F+ +LK C + ++ G ++H +VK G D F +TGL +MYAK
Sbjct: 123 FVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAK 182
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
CR + +R+VFD ++++VSW +++AGY QN A+ L + N M E ++ + IT+ S+
Sbjct: 183 CRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSV 242
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
+ A + LR + GK +HGY ++ G + ++ TAL+DMY KCG+++ AR +FD + ++
Sbjct: 243 LPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNV 302
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW +MI Y Q+ P +A+ +F P V++ L A A LG+L GR +H L
Sbjct: 303 VSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------ 425
+ L L+ + +V+N+L+ MY KC + A +F + +++WN++I G N
Sbjct: 363 SVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEA 422
Query: 426 -----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
V PD T VSVI+A A L +H + L NV+V TAL++
Sbjct: 423 LNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRN-CLDKNVFVTTALVD 481
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
YAKCG AR++FD M E++ TW+AMI GYG G G +L LF +M ++PN V
Sbjct: 482 MYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVT 541
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
F +++SACSH+G+V G KCF+ M ++ PSM HY MVDLL RAGRL EA +F+ M
Sbjct: 542 FLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
P++P V+++GA L C ++ + E + +++ EL+P+ Y+VL++N+Y + W +V
Sbjct: 602 PVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVG 661
Query: 655 QVRELMKQRGLSKSPGCSLVDL 676
QVR M ++GL K+PGCS+V++
Sbjct: 662 QVRVSMLRQGLRKTPGCSMVEI 683
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/552 (40%), Positives = 334/552 (60%), Gaps = 20/552 (3%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
DN+ V++AC +L+++ G +H + K G D FV LVDMY KCR+I +R +F
Sbjct: 29 DNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLF 88
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D+ ++++V+WT MI GY + A E LVLF +MRE V +++ + ++V ACAKL A+H
Sbjct: 89 DKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMH 148
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
+ + + YI + +++ L TA++DMY KCG + AR +FD + +++SW+AMI Y
Sbjct: 149 KARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYG 208
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
G KAL LF + P+ +T+AS+L A + L NL MGR++H + + GL+ D+
Sbjct: 209 YHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHF 268
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
V ALVDMY KC I DAR++F+ E+D++ W +I G ++
Sbjct: 269 VCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEG 328
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V PD V +V+V+ ACA LGA+ ++ Y ++ +V +GTA+++ +AKCG +SA
Sbjct: 329 VVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKF-QLDVILGTAMIDMHAKCGCVESA 387
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R +FD M EKN ++WSAMI YG G G +L LF ML + PN++ ++L ACSH
Sbjct: 388 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHA 447
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG + F M D+ +KHY C+VDLL RAGRL+EAL+ +E+M +E D L+GA
Sbjct: 448 GLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGA 507
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
FL C + L E +LEL P +Y+L+SN+YA+ GRW V + R+LM QR L
Sbjct: 508 FLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRL 567
Query: 666 SKSPGCSLVDLD 677
K PG + +++D
Sbjct: 568 KKIPGWTWIEVD 579
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 231/446 (51%), Gaps = 30/446 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV MY ++ AR +FD M D ++ VMI Y + + ++ MR+ D
Sbjct: 71 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 130
Query: 146 NFVFSKVLKACCEL------RDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSS 199
V+ AC +L R ID+ ++ K D + T ++DMYAKC + S+
Sbjct: 131 KVAMVTVVFACAKLGAMHKARIIDDYIQ-----RKKFQLDVILGTAMIDMYAKCGCVESA 185
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R++FD +KNV+SW++MIA Y + ++ L LF M + ++ITL SL+ AC+ L
Sbjct: 186 REIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDL 245
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ L G+ +H + K G++++ + AL+DMY KC I DAR +FD++ DLV+WT MI
Sbjct: 246 KNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMI 305
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY + G +++L LF + P+ V + +V+ A A+LG ++ R + R +
Sbjct: 306 GGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQ 365
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------- 421
D + A++DM+AKC + AR IF+ EK+VI+W+++I+
Sbjct: 366 LDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMM 425
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
L + P+ +TLVS++ AC+ G V+ G + + + ++V T +++ + G
Sbjct: 426 LRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGR 485
Query: 482 AQSARMVFDAMR-EKNTVTWSAMIGG 506
A + ++M EK+ W A +G
Sbjct: 486 LDEALKLIESMTVEKDEGLWGAFLGA 511
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 133/440 (30%), Positives = 215/440 (48%), Gaps = 28/440 (6%)
Query: 61 STGSLKAFHALLIVDGLTNDK-------CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
+ L A H I+D K T ++ MY G V+ AR +FD M + S
Sbjct: 140 ACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVIS 199
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ MI Y + + ++ ++ M D + +L AC +L+++ G +H +
Sbjct: 200 WSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVY 259
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
K G D FV LVDMY KCR+I +R +FD+ ++++V+WT MI GY + A E LV
Sbjct: 260 KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLV 319
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
LF++MRE V +++ + ++V ACAKL A+H+ + + YI + +++ L TA++DM+
Sbjct: 320 LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHA 379
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
KCG + AR +FD + +++SW+AMI Y G KAL LF + PN +T+ S
Sbjct: 380 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 439
Query: 353 VLSASAQLGNLNMGRMVHSL-----GIRLGLEDYTVINALVDMYAKCHVIADARYIFET- 406
+L A + G + G SL +R ++ YT + VD+ + + +A + E+
Sbjct: 440 LLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV---VDLLGRAGRLDEALKLIESM 496
Query: 407 TSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
T EKD W + + + +V A SL +Q + H +L SN+
Sbjct: 497 TVEKDEGLWGAFLGACRTHKD-----VVLAEKAATSLLELQPQNPGHY------ILLSNI 545
Query: 467 YVGTALLNFYAKCGDAQSAR 486
Y AK D S R
Sbjct: 546 YANAGRWEDVAKTRDLMSQR 565
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 168/318 (52%), Gaps = 27/318 (8%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P++ T+ V+ A L NL MGR++H + + GL+ D+ V ALVDMY KC I DAR++
Sbjct: 28 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL 87
Query: 404 FETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV 446
F+ E+D++ W +I G ++ V PD V +V+V+ ACA LGA+
Sbjct: 88 FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAM 147
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ Y ++ +V +GTA+++ YAKCG +SAR +FD M EKN ++WSAMI
Sbjct: 148 HKARIIDDYIQRKK-FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAA 206
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
YG G G +L LF ML+ + P+++ ++L ACS + G + + +KF
Sbjct: 207 YGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIV---YKFGL 263
Query: 567 SMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
+ H+VC +VD+ + +E+A + MP E D+ + + G + V+
Sbjct: 264 DLDHFVCAALVDMYGKCREIEDARFLFDKMP-ERDLVTWTVMIGGYAECGNANESLVLFD 322
Query: 625 KMLE--LHPDKACYYVLV 640
KM E + PDK +V
Sbjct: 323 KMREEGVVPDKVAMVTVV 340
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/647 (36%), Positives = 372/647 (57%), Gaps = 23/647 (3%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
P LL C S L+ L+ +GL + TKLVS++ +G V A VF+ + +
Sbjct: 39 PAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 110 DFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ M++ + ++DL K + +F+ MR E + F+ +LK C + ++ G ++
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKAL-QFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +VK G D F +TGL +MYAKCR + +R+VFD ++++VSW +++AGY QN A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ L + M E ++ + IT+ S++ A + LR + GK +HGY ++ G + ++ TAL
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY KCG++ AR +FD + ++VSW +MI Y Q+ P +A+ +F P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
V++ L A A LG+L GR +H L + LGL+ + +V+N+L+ MY KC + A +F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+ +++WN++I G N V PD T VSVI+A A L
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H + L NV+V TAL++ YAKCG AR++FD M E++ TW+AMI GYG
Sbjct: 458 KWIHGVVMR-SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L LF +M ++PN V F +++SACSH+G+V G KCFY M ++ SM
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY MVDLL RAGRL EA +F+ MP++P V+++GA L C ++ + E +++ EL
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+PD Y+VL++N+Y + W +V QVR M ++GL K+PGCS+V++
Sbjct: 637 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEI 683
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 233/648 (35%), Positives = 345/648 (53%), Gaps = 58/648 (8%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++ Y F V A VF M D ++ MI Y N+ + ++ M E +
Sbjct: 97 LINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPN 156
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVF 203
F +LKAC +++G K+H IVK G D V T L+ MY+KC +I + +VF
Sbjct: 157 RITFLSILKACNNYSILEKGRKIHT-IVKAMGMETDVAVATALITMYSKCGEISVACEVF 215
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ ++NVVSWT++I Q+ E L+ +M + + N +T SL+ +C AL+
Sbjct: 216 HKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALN 275
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
+G+ +H +I + G+E + + AL+ MY KC ++++AR +FD + D++SW+AMI GY
Sbjct: 276 RGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYA 335
Query: 324 QSGYPDK-----ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
QSGY DK +L + FPN VT S+L A G L GR +H+ ++G
Sbjct: 336 QSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGF 395
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS-------------------- 417
E D ++ A+ +MYAKC I +A +F + K+V+AW S
Sbjct: 396 ELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSE 455
Query: 418 -----------IISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+I+G N PD VT+++++ AC +L ++ G
Sbjct: 456 MPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERG 515
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA + K GL S V V T+L+ Y+KCG AR VFD M ++TV W+AM+ GYG
Sbjct: 516 KLVHAEAVKLGLESDTV-VATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQ 574
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
GDG ++ LF ML E V PNE+ T ++SACS G+V EG + F M DFK P +
Sbjct: 575 HGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQ 634
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVDLL RAGRL+EA EF+++MP EPD+S++ A L C ++ L E +LEL
Sbjct: 635 HYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILEL 694
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P A Y+ +SN+YA GRW +VR +M RGL K G S +++D
Sbjct: 695 EPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEID 742
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 176/590 (29%), Positives = 284/590 (48%), Gaps = 74/590 (12%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
V++ C + R ++G VH ++ ++G D ++ L++ Y+K D+ S+ QVF ++
Sbjct: 62 VIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRD 121
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
VV+W+SMIA Y N+ + F RM + +E N+IT S++ AC L +G+ +H
Sbjct: 122 VVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHT 181
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+ +G+E + + TAL+ MY KCG I A VF ++ ++VSWTA+I Q ++
Sbjct: 182 IVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNE 241
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
A +L+ A PN VT S+L++ LN GR +HS GLE D V NAL+
Sbjct: 242 AFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALIT 301
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------------DDNVS 427
MY KC+ + +AR IF+ S++DVI+W+++I+G + V
Sbjct: 302 MYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVF 361
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQG--------------------------- 460
P+ VT +S++ AC + GA++ G +HA +K G
Sbjct: 362 PNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQV 421
Query: 461 ---LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
+ + NV T+ L+ Y KCGD SA VF M +N V+W+ MI GY GD
Sbjct: 422 FSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVF 481
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
L S M E QP+ V TIL AC + G K ++ ++ +
Sbjct: 482 ELLSSMKAEGFQPDRVTVITILEACGALAGLERG-KLVHAEAVKLGLESDTVVATSLIGM 540
Query: 578 LARAGRLEEALEFMENMPIEPDVS----LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
++ G++ EA + M V+ L G HG GL + DL + M+K+ + P++
Sbjct: 541 YSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEA-VDLFKRMLKE--RVSPNE 597
Query: 634 ACYYVLVSNLYASDGRWIRVNQVREL--MKQRGLSKSP-----GCSLVDL 676
+ ++ + ++ R V + RE+ M Q +P GC +VDL
Sbjct: 598 ----ITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGC-MVDL 642
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 248/517 (47%), Gaps = 60/517 (11%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDS 105
I L++L C + L + H ++ G+ D T L++MY G + A VF
Sbjct: 158 ITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHK 217
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M + S+ +I+ + + E Y+ M + + F +L +C ++ G
Sbjct: 218 MTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRG 277
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H I + G D V L+ MY KC + +R++FD ++V+SW++MIAGY Q+
Sbjct: 278 RRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQS 337
Query: 225 -----DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
+ E L RMR V N++T S++ AC AL QG+ +H + K+G E+
Sbjct: 338 GYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFEL 397
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA---------------------- 317
+ L TA+ +MY KCG+I +A VF ++ + ++V+WT+
Sbjct: 398 DRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMP 457
Query: 318 ---------MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
MI GY Q+G K +L + K F P+ VT+ ++L A L L G++
Sbjct: 458 TRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKL 517
Query: 369 VHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------ 421
VH+ ++LGLE TV+ +L+ MY+KC +A+AR +F+ S +D +AWN++++G
Sbjct: 518 VHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGD 577
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
L + VSP+ +TL +VISAC+ G VQ G + + ++
Sbjct: 578 GLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYG 637
Query: 471 ALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+++ + G Q A +M E + W A++G
Sbjct: 638 CMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGA 674
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/482 (28%), Positives = 236/482 (48%), Gaps = 41/482 (8%)
Query: 215 TSMIAGYVQNDCA----QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
TS+ G V C +E + L +++ + N T G ++ CAK R GK +H
Sbjct: 21 TSVSGGEVWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHK 80
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+ ++G+EI+ +L +L++ Y K ++ A VF + D+V+W++MI Y + +P K
Sbjct: 81 QLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAK 140
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
A F A+ PN +T S+L A L GR +H++ +G+E D V AL+
Sbjct: 141 AFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALIT 200
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVT 432
MY+KC I+ A +F +E++V++W +II L +SP+AVT
Sbjct: 201 MYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVT 260
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
VS++++C + A+ G +H++ +++G L +++ V AL+ Y KC Q AR +FD M
Sbjct: 261 FVSLLNSCNTPEALNRGRRIHSHISERG-LETDMIVANALITMYCKCNSVQEAREIFDRM 319
Query: 493 REKNTVTWSAMIGGYGMQGDGGGS-----LALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+++ ++WSAMI GY G L M E V PN+V F +IL AC+ G
Sbjct: 320 SKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGA 379
Query: 548 VGEGWKCFYSMCR-DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+ +G + + + F+ S++ + ++ A+ G + EA + M +V + +F
Sbjct: 380 LEQGRQIHAELSKVGFELDRSLQ--TAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSF 436
Query: 607 LH---GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
L CG S + K E+ + L+ YA +G ++V ++ MK
Sbjct: 437 LSMYIKCGDLSSAE------KVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAE 490
Query: 664 GL 665
G
Sbjct: 491 GF 492
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/614 (37%), Positives = 356/614 (57%), Gaps = 19/614 (3%)
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+ ++SM FG + +A VF MP D +S+ VM+ Y ++ ++ Y M
Sbjct: 132 RLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA 191
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
D + F VL+ C + D G +VH +++ G G + VL LV MYAKC DI ++
Sbjct: 192 GMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R+VFD + +SW +MIAG+ +N + GL LF M E V+ N +T+ S+ A L
Sbjct: 252 RKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML 311
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ K +HG+ +K G I+ +L+ MY G + DA +F + + D +SWTAMI
Sbjct: 312 SEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY ++G+PDKAL+++ + + P+ VTIAS L+A A LG L++G +H L G
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y V+ NAL++MYAK I A +F+ +EKDV++W+S+I+G N
Sbjct: 432 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM 491
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V P++VT ++ +SACA+ GA++ G +HAY + G+ S YV ALL+ Y KCG
Sbjct: 492 LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI-GSEGYVPNALLDLYVKCGQT 550
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A F EK+ V+W+ M+ G+ G G +L+LF+ M+ P+EV F +L AC
Sbjct: 551 SYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S GMV +GW+ F+ M F VP++KHY CMVDLL+R G+L EA + MPI+PD ++
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L+GC ++ +LGE+ K +LEL P+ Y+VL+ +LY G+W +V +VR+ M++
Sbjct: 671 WGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMRE 730
Query: 663 RGLSKSPGCSLVDL 676
+GL + GCS V++
Sbjct: 731 KGLEQDNGCSWVEV 744
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 183/373 (49%), Gaps = 34/373 (9%)
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
ACA+ A H + L++G A+L M V+ G I A VF ++ D+ S
Sbjct: 118 ACARADAEHPS-----FGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPERDVFS 164
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W M+ GY + G+ ++AL L+ WA P+ T VL + + MGR VH+ +
Sbjct: 165 WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVL 224
Query: 375 RLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------ 421
R G D V+NALV MYAKC I AR +F+ + D I+WN++I+G
Sbjct: 225 RFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLE 284
Query: 422 -----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
L++ V P+ +T+ SV A L V +H ++ K+G + +V +L+ Y
Sbjct: 285 LFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRG-FAIDVAFCNSLIQMY 343
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
G A +F M K+ ++W+AMI GY G +L +++ M V P++V
Sbjct: 344 TSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIA 403
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+ L+AC+ G + G K + + ++ F+ + ++++ A++ +++A+E + M
Sbjct: 404 SALAACACLGRLDVGIK-LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFM-A 461
Query: 597 EPDVSLFGAFLHG 609
E DV + + + G
Sbjct: 462 EKDVVSWSSMIAG 474
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/614 (37%), Positives = 356/614 (57%), Gaps = 19/614 (3%)
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+ ++SM FG + +A VF MP D +S+ VM+ Y ++ ++ Y M
Sbjct: 132 RLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA 191
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
D + F VL+ C + D G +VH +++ G G + VL LV MYAKC DI ++
Sbjct: 192 GMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R+VFD + +SW +MIAG+ +N + GL LF M E V+ N +T+ S+ A L
Sbjct: 252 RKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML 311
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ K +HG+ +K G I+ +L+ MY G + DA +F + + D +SWTAMI
Sbjct: 312 SEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY ++G+PDKAL+++ + + P+ VTIAS L+A A LG L++G +H L G
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y V+ NAL++MYAK I A +F+ +EKDV++W+S+I+G N
Sbjct: 432 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM 491
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V P++VT ++ +SACA+ GA++ G +HAY + G+ S YV ALL+ Y KCG
Sbjct: 492 LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGI-GSEGYVPNALLDLYVKCGQT 550
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A F EK+ V+W+ M+ G+ G G +L+LF+ M+ P+EV F +L AC
Sbjct: 551 SYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCAC 610
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S GMV +GW+ F+ M F VP++KHY CMVDLL+R G+L EA + MPI+PD ++
Sbjct: 611 SRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAV 670
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L+GC ++ +LGE+ K +LEL P+ Y+VL+ +LY G+W +V +VR+ M++
Sbjct: 671 WGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMRE 730
Query: 663 RGLSKSPGCSLVDL 676
+GL + GCS V++
Sbjct: 731 KGLEQDNGCSWVEV 744
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/373 (28%), Positives = 183/373 (49%), Gaps = 34/373 (9%)
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
ACA+ A H + L++G A+L M V+ G I A VF ++ D+ S
Sbjct: 118 ACARADAEHPS-----FGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPERDVFS 164
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W M+ GY + G+ ++AL L+ WA P+ T VL + + MGR VH+ +
Sbjct: 165 WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVL 224
Query: 375 RLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------ 421
R G D V+NALV MYAKC I AR +F+ + D I+WN++I+G
Sbjct: 225 RFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLE 284
Query: 422 -----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
L++ V P+ +T+ SV A L V +H ++ K+G + +V +L+ Y
Sbjct: 285 LFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRG-FAIDVAFCNSLIQMY 343
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
G A +F M K+ ++W+AMI GY G +L +++ M V P++V
Sbjct: 344 TSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIA 403
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+ L+AC+ G + G K + + ++ F+ + ++++ A++ +++A+E + M
Sbjct: 404 SALAACACLGRLDVGIK-LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFM-A 461
Query: 597 EPDVSLFGAFLHG 609
E DV + + + G
Sbjct: 462 EKDVVSWSSMIAG 474
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/624 (36%), Positives = 358/624 (57%), Gaps = 24/624 (3%)
Query: 72 LIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIV 131
+++DG+ KLV MY G +K R VFD + + + +MI Y + Y + +
Sbjct: 181 VMIDGILG----VKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESI 236
Query: 132 EFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMY 190
+K M + + +++ FS +LK + ++EG +VH I K+G + V+ L+ Y
Sbjct: 237 NLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFY 296
Query: 191 AKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLG 250
R + ++++FDE D++V+SW SMI+GYV+N G+ +F +M V+ + T+
Sbjct: 297 FVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMV 356
Query: 251 SLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
++ ACA + L GK LH Y +K ++ LLDMY KCG++ A VF+ +
Sbjct: 357 NVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDE 416
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSWT+MI GY + G D A+KLF + K P+ + S+L+A A GNL G++V
Sbjct: 417 KTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIV 476
Query: 370 HSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV-- 426
H LE + + NAL DMYAKC + DA +F +KDVI+WN++I G N
Sbjct: 477 HDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLP 536
Query: 427 --------------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
PD T+ ++ ACASL A+ G +H Y+ + G S + YV A+
Sbjct: 537 NEALTLFAEMQRESKPDGTTVACILPACASLAALDKGREIHGYALRNGY-SEDKYVTNAV 595
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
++ Y KCG AR +FD + K+ V+W+ MI GYGM G G ++ F+ M ++P+E
Sbjct: 596 VDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDE 655
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
V F +IL ACSH+G++ EGWK F M ++ + P+++HY CMVDLLAR G L +A +F++
Sbjct: 656 VSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIK 715
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
MPI+PD +++GA L GC ++ L E + +++ EL P+ YYVL++N+YA +W
Sbjct: 716 AMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEE 775
Query: 653 VNQVRELMKQRGLSKSPGCSLVDL 676
V ++R+ + QRGL K+PGCS +++
Sbjct: 776 VQKLRKKIGQRGLKKNPGCSWIEI 799
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 194/369 (52%), Gaps = 19/369 (5%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
S++ CA+ +++ G+ + I G+ I+ L L+ MYVKCG++++ R VFD+L
Sbjct: 155 SILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSES 214
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
+ W MI Y+ SG +++ LF PN T +S+L A + + GR VH
Sbjct: 215 KIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVH 274
Query: 371 SLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDD 424
L +LG Y TV+N+L+ Y + A+ +F+ +++DVI+WNS+IS GLDD
Sbjct: 275 GLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDD 334
Query: 425 N------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
V D T+V+V ACA++G + +G LH+YS K L V L
Sbjct: 335 RGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTL 394
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
L+ Y+KCGD SA VF+ M EK V+W++MI GY +G G++ LF +M + V P+
Sbjct: 395 LDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDV 454
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
T+IL+AC+ G + G K + R+ + + D+ A+ G +++A +
Sbjct: 455 YAVTSILNACAINGNLKSG-KIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFS 513
Query: 593 NMPIEPDVS 601
+M + +S
Sbjct: 514 HMKKKDVIS 522
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/643 (36%), Positives = 365/643 (56%), Gaps = 22/643 (3%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
C N G + KA + L+ L + + L+SM+ FG V A +VF M D
Sbjct: 43 CENKRGYSEGEYVWKAVLSSLVT--LLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDL 100
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
+S+ V++ Y + + + Y + D + F VL++C D+ G +VH
Sbjct: 101 FSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAH 160
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
+V+ D V+ L+ MY KC D+ S+R +FD+ ++ +SW +MI+GY +ND EG
Sbjct: 161 VVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEG 220
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L LF RMRE ++ + +T+ S+++AC L G LH Y+++ + N + +L+ M
Sbjct: 221 LELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQM 280
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y+ G+ ++A SVF + D+VSWT +I G + PDKAL+ + + P+ VTI
Sbjct: 281 YLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTI 340
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSE 409
ASVLSA A LG L+MG +H L R G Y V+ N+L+DMY+KC I A IF +
Sbjct: 341 ASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPD 400
Query: 410 KDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLGAVQVGSSLH 453
KDVI+W S+I+GL N P++VTL+S +SACA +GA+ G +H
Sbjct: 401 KDVISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVTLISALSACARVGALMCGKEIH 460
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
A++ K G+ + ++ A+L+ Y +CG ++A F+ + EK+ W+ ++ GY +G G
Sbjct: 461 AHALKAGM-GFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKG 518
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+ LF M+ E+ P++V F ++L ACS +GMV EG + F M ++ P++KHY C
Sbjct: 519 AMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYAC 578
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
+VDLL RAG+L EA EF+E MPI+PD +++GA L+ C ++ LGE+ + + + +
Sbjct: 579 VVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAES 638
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YY+L+ NLYA G+W V +VR MK+ GL PGCS V++
Sbjct: 639 IGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEV 681
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/609 (36%), Positives = 362/609 (59%), Gaps = 20/609 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+SM+ FG++ A VF M + +S+ V++ Y L+ + ++ Y M + D
Sbjct: 147 LLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPD 206
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ F VL+ C + ++ G ++H +++ G D V+ L+ MY KC D+ ++R VFD
Sbjct: 207 VYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFD 266
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +++ +SW +MI+GY +N EGL LF M + V+ + +T+ S++TAC L
Sbjct: 267 KMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRL 326
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY+L+ + + +L+ MY G I +A +VF DLVSWTAMI GY
Sbjct: 327 GRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYEN 386
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
P KAL+ + + P+ +TIA VLSA + L NL+MG +H + + GL Y+++
Sbjct: 387 CLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIV 446
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------VS 427
N+L+DMYAKC I A IF +T EK++++W SII GL N +
Sbjct: 447 ANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRRLK 506
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P++VTLV V+SACA +GA+ G +HA++ + G+ S + ++ A+L+ Y +CG + A
Sbjct: 507 PNSVTLVCVLSACARIGALTCGKEIHAHALRTGV-SFDGFMPNAILDMYVRCGRMEYAWK 565
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F ++ + T +W+ ++ GY +G G + LF M+ V PNEV F +IL ACS +GM
Sbjct: 566 QFFSVDHEVT-SWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGM 624
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG + F SM + +P++KHY C+VDLL R+G+LEEA EF++ MP++PD +++GA L
Sbjct: 625 VAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALL 684
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
+ C ++ +LGE+ + + + YY+L+SNLYA +G+W +V +VR++M+Q GL
Sbjct: 685 NSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIV 744
Query: 668 SPGCSLVDL 676
PGCS V++
Sbjct: 745 DPGCSWVEV 753
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 19/311 (6%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
+L+ C RA +G ++ Y+ ++ L ALL M+V+ GN+ DA VF +
Sbjct: 111 ALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKR 170
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
+L SW ++ GY ++G D+AL L+ W P+ T VL + NL GR +H
Sbjct: 171 NLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIH 230
Query: 371 SLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---- 425
IR G E D V+NAL+ MY KC + AR +F+ +D I+WN++ISG +N
Sbjct: 231 VHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCL 290
Query: 426 -------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
V PD +T+ SVI+AC LG ++G +H Y + + + +L
Sbjct: 291 EGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTE-FGRDPSIHNSL 349
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
+ Y+ G + A VF ++ V+W+AMI GY +L + M E + P+E
Sbjct: 350 IPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDE 409
Query: 533 VIFTTILSACS 543
+ +LSACS
Sbjct: 410 ITIAIVLSACS 420
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 177/348 (50%), Gaps = 18/348 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ L+ MY S G ++ A +VF D S+ MI Y + + +E YK M
Sbjct: 346 HNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGI 405
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF--VLTGLVDMYAKCRDIGSSR 200
D + VL AC L ++D GM +H E+ K G S+ V L+DMYAKC+ I +
Sbjct: 406 MPDEITIAIVLSACSCLCNLDMGMNLH-EVAKQKGLVSYSIVANSLIDMYAKCKCIDKAL 464
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++F TL+KN+VSWTS+I G N+ E L F M ++ N +TL +++ACA++
Sbjct: 465 EIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIG 523
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID--LVSWTAM 318
AL GK +H + L+ G+ + + A+LDMYV+CG + A + + S+D + SW +
Sbjct: 524 ALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYA---WKQFFSVDHEVTSWNIL 580
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLG 373
+ GY + G A +LF ++ PN VT S+L A ++ G + G M +
Sbjct: 581 LTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYS 640
Query: 374 IRLGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIIS 420
I L+ Y + VD+ + + +A +I + + D W ++++
Sbjct: 641 IMPNLKHYACV---VDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLN 685
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/649 (36%), Positives = 371/649 (57%), Gaps = 28/649 (4%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
P + LL C S L +I +G N+ TK++S++ FG A VF+ +
Sbjct: 49 PSVVLLENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELK 108
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFY---KCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
+ +M++ Y N D + F+ C RL D ++ +L+ C E D+ +G
Sbjct: 109 LDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGD---YACLLQLCGENLDLKKGR 165
Query: 167 KVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H I+ G + FV+T ++ +YAKCR I ++ ++F+ K++VSWT+++AGY QN
Sbjct: 166 EIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNG 225
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A+ L L +M+E + + +TL S++ A A ++AL G+ +HGY + G E ++
Sbjct: 226 HAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTN 285
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
ALLDMY KCG+ R AR VF + S +VSW MI G Q+G ++A F P
Sbjct: 286 ALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVP 345
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
VT+ VL A A LG+L G VH L +L L+ + +V+N+L+ MY+KC + A IF
Sbjct: 346 TRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIF 405
Query: 405 ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQ 447
EK + WN++I G N + D TLV VI+A A +
Sbjct: 406 NNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNR 464
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+H + + + +NV+V TAL++ YAKCG ++AR +FD M+E++ +TW+AMI GY
Sbjct: 465 QAKWIHGLAVR-ACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGY 523
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G G G +L LF++M V+PN++ F +++SACSH+G V EG F SM D+ P+
Sbjct: 524 GTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPT 583
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
M HY MVDLL RAG+L++A F++ MPI+P +S+ GA L C ++ +LGE +K+
Sbjct: 584 MDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLF 643
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+L PD+ Y+VL++N+YAS+ W +V +VR M+ +GL K+PGCS V+L
Sbjct: 644 KLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVEL 692
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/609 (34%), Positives = 358/609 (58%), Gaps = 20/609 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+SM+ FG++ A VF M D +S+ V++ Y + + + Y M +
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ F VLK C + DI G ++H +++ G D V L+ MY KC DI ++R +FD
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ ++ +SW +MI+GY +N EGL LF+ MRE V+ + IT+ ++ +AC L
Sbjct: 258 KMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERL 317
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY++K + + +L+ MY G + +A +VF + S D+VSWTAMI
Sbjct: 318 GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
P KA++ + + P+ +T+ SVLSA A +G+L++G +H + I+ GL + ++
Sbjct: 378 HKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIV 437
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------DDNVS 427
N+L+DMY+KC + +A +F S K+V++W S+I GL +++
Sbjct: 438 SNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMK 497
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P++VTL+SV+SACA +GA+ G +HA++ + G+ + ++ A+L+ Y +CG A
Sbjct: 498 PNSVTLISVLSACARIGALMRGKEIHAHALRTGV-GFDGFLPNAILDMYVRCGRKVPALN 556
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F++ ++K+ W+ ++ GY QG ++ LF ML E+ P+E+ F ++L ACS +GM
Sbjct: 557 QFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGM 615
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG + F M + P++KHY C+VD+L RAG+L++A +F+++MPI PD +++GA L
Sbjct: 616 VTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALL 675
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
+ C ++ +LGE+ K++ E YY+L+ NLYA G W +V++VR LM++RGLS
Sbjct: 676 NACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSA 735
Query: 668 SPGCSLVDL 676
PGCS V++
Sbjct: 736 DPGCSWVEI 744
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 204/421 (48%), Gaps = 34/421 (8%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L+ MY S G ++ A +VF M + D S+ MI + L VE YK M
Sbjct: 337 NNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGI 396
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQ 201
D VL AC + +D G+++H +K G +++ L+DMY+KC+ + ++ +
Sbjct: 397 LPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALE 456
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF KNVVSWTS+I G N+ + E L+ F +M+E ++ N +TL S+++ACA++ A
Sbjct: 457 VFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGA 515
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +GK +H + L+ G+ + L A+LDMYV+CG A + F+ D+ +W ++ G
Sbjct: 516 LMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTG 574
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRL 376
Y Q G A++LF + P+ +T S+L A ++ G + G M + +
Sbjct: 575 YAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTP 634
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSV 436
L+ Y + VD+ + + DA + D + PDA ++
Sbjct: 635 NLKHYACV---VDILGRAGQLDDAYDFIQ-----------------DMPIRPDAAIWGAL 674
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL--NFYAKCGDAQSARMVFDAMRE 494
++AC V++G + K+ N VG +L N YA CG+ V MRE
Sbjct: 675 LNACRIHRNVELGE----IAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRE 730
Query: 495 K 495
+
Sbjct: 731 R 731
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 188/385 (48%), Gaps = 20/385 (5%)
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
++ + M E +E + +L+ C RA +G ++ + + L AL
Sbjct: 79 EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNAL 138
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L M+V+ GN+ DA VF ++ D+ SW ++ GY ++G D+AL L+ WA+ PN
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T SVL A + ++ G+ +H+ IR G E D V NAL+ MY KC I++AR +F+
Sbjct: 199 YTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
++D I+WN++ISG +N V PD +T+ +V SAC L ++G
Sbjct: 259 MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLG 318
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H Y K ++ + +L+ Y+ G + A VF M K+ V+W+AMI
Sbjct: 319 RGVHGYVVKSE-FGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
++ + M E + P+E+ ++LSAC+ G + G + + + V +
Sbjct: 378 HKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR-LHEIAIKTGLVSHVI 436
Query: 570 HYVCMVDLLARAGRLEEALEFMENM 594
++D+ ++ ++ ALE N+
Sbjct: 437 VSNSLIDMYSKCKCVDNALEVFRNI 461
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 224/613 (36%), Positives = 343/613 (55%), Gaps = 21/613 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L++M+ G V A VF+++P D ++ MI + +K ++ M + +
Sbjct: 244 TALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQ 303
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D F +LKAC +++G +VH + +VG + +V T L+ MY KC + + +V
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEV 363
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ +NVVSWT+MIAG+ Q+ +E + FN+M E +E N++T S++ AC++ AL
Sbjct: 364 FNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSAL 423
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
QG+ +H I+K G + + TALL MY KCG++ DAR+VF+ + ++V+W AMI Y
Sbjct: 424 KQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAY 483
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
Q D A+ F P+ T S+L+ L +G+ V SL IR G E D
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDL 543
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DD 424
+ NALV M+ C + A +F E+D+++WN+II+G +
Sbjct: 544 HIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQES 603
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V PD +T +++ACAS A+ G LHA T + L +V VGT L++ Y KCG
Sbjct: 604 GVKPDQITFTGLLNACASPEALTEGRRLHALIT-EAALDCDVVVGTGLISMYTKCGSIDD 662
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A +VF + +KN +W++MI GY G G +L LF M E V+P+ + F LSAC+H
Sbjct: 663 AHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAH 722
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G++ EG F SM +DF P M+HY CMVDL RAG L EA+EF+ M ++PD L+G
Sbjct: 723 AGLIKEGLHHFESM-KDFNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWG 781
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
A L C ++ +L E + +K LEL P+ YV++SN+YA+ G W V ++R++M RG
Sbjct: 782 ALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRG 841
Query: 665 LSKSPGCSLVDLD 677
+ K PG S +++D
Sbjct: 842 VVKKPGQSWIEVD 854
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/578 (29%), Positives = 298/578 (51%), Gaps = 53/578 (9%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+SMY G+ A+ +FD MP+ D YS+ +++ Y + Y++ ++ M + + D
Sbjct: 145 LISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPD 204
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ F +L AC + +++D+G ++ I+ G D FV T L++M+ KC + + +VF+
Sbjct: 205 KYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFN 264
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+++++WTSMI G ++ ++ LF M E V+ +++ SL+ AC AL Q
Sbjct: 265 NLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQ 324
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H + ++G++ ++ TALL MY KCG++ DA VF+ + ++VSWTAMI G+ Q
Sbjct: 325 GKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQ 384
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTV 383
G ++A F + PN VT S+L A ++ L GR +H I+ G + D V
Sbjct: 385 HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRV 444
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
AL+ MYAKC + DAR +FE S+++V+AWN++I+ L + +
Sbjct: 445 RTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGI 504
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD+ T S+++ C S A+++G + + + G S++++ AL++ + CGD SA
Sbjct: 505 KPDSSTFTSILNVCKSPDALELGKWVQSLIIRAG-FESDLHIRNALVSMFVNCGDLMSAM 563
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F+ M E++ V+W+ +I G+ G+ + F M V+P+++ FT +L+AC+
Sbjct: 564 NLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPE 623
Query: 547 ---------------------MVGEGWKCFYSMCRD-------FKFVPSMKHY--VCMVD 576
+VG G Y+ C F +P Y M+
Sbjct: 624 ALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMIT 683
Query: 577 LLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCG 611
A+ GR +EALE M+ ++PD F L C
Sbjct: 684 GYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACA 721
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 264/518 (50%), Gaps = 30/518 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEI--VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
+S +L+ C + +++ +G ++H I K+ PD F+ L+ MYAKC + S++Q+FDE
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQ-PDIFMWNMLISMYAKCGNTNSAKQIFDE 164
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
DK+V SW ++ GYVQ+ +E L +M + V+ ++ T ++ ACA + + +G
Sbjct: 165 MPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKG 224
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
L IL G + + + TAL++M++KCG + DA VF+ L DL++WT+MI G +
Sbjct: 225 GELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH 284
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
+A LF + P+ V S+L A L G+ VH+ +GL+ + V
Sbjct: 285 RQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVG 344
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVS 427
AL+ MY KC + DA +F ++V++W ++I+G ++ +
Sbjct: 345 TALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE 404
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+ VT +S++ AC+ A++ G +H K G ++ + V TALL+ YAKCG AR
Sbjct: 405 PNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDD-RVRTALLSMYAKCGSLMDARN 463
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF+ + ++N V W+AMI Y ++A F +L E ++P+ FT+IL+ C
Sbjct: 464 VFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDA 523
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS----LF 603
+ G K S+ F + +V + G L A+ +MP VS +
Sbjct: 524 LELG-KWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIA 582
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G HG ++ FD ++M + ++ PD+ + L++
Sbjct: 583 GFVQHGENQFA-FDYFKMMQESGVK--PDQITFTGLLN 617
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 223/453 (49%), Gaps = 27/453 (5%)
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E +++ + ++ ++ T SL+ C K + L G+ +H +I I+ + + L+
Sbjct: 87 EAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLI 146
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
MY KCGN A+ +FDE+ D+ SW ++ GY Q ++A +L P+
Sbjct: 147 SMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKY 206
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
T +L+A A N++ G + SL + G + D V AL++M+ KC + DA +F
Sbjct: 207 TFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNL 266
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
+D+I W S+I+GL ++ V PD V VS++ AC A++ G
Sbjct: 267 PRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGK 326
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+HA + G L + +YVGTALL+ Y KCG + A VF+ ++ +N V+W+AMI G+
Sbjct: 327 RVHARMKEVG-LDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQH 385
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G + F+ M+ ++PN V F +IL ACS + +G + + + ++ +
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKA-GYITDDRV 444
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE-- 628
++ + A+ G L +A E + + +V + A + + ++D + +L+
Sbjct: 445 RTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAYVQHEKYDNAVATFQALLKEG 503
Query: 629 LHPDKACYYVLVSNLYASD----GRWIRVNQVR 657
+ PD + + +++ + D G+W++ +R
Sbjct: 504 IKPDSSTFTSILNVCKSPDALELGKWVQSLIIR 536
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 193/379 (50%), Gaps = 13/379 (3%)
Query: 53 LNLLGLCKSTGSLKA---FHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+++LG C +LK H +I G +T+D+ T L+SMY G + AR+VF+ +
Sbjct: 411 MSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISK 470
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ ++ MI Y ++ Y + V ++ + K + D+ F+ +L C ++ G V
Sbjct: 471 QNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWV 530
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
I++ G D + LV M+ C D+ S+ +F++ ++++VSW ++IAG+VQ+
Sbjct: 531 QSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGEN 590
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
Q F M+E V+ +QIT L+ ACA AL +G+ LH I + ++ + + T L
Sbjct: 591 QFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGL 650
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MY KCG+I DA VF L ++ SWT+MI GY Q G +AL+LF + P+
Sbjct: 651 ISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDW 710
Query: 348 VTIASVLSASAQLGNLNMG----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA-RY 402
+T LSA A G + G + I +E Y +VD++ + ++ +A +
Sbjct: 711 ITFVGALSACAHAGLIKEGLHHFESMKDFNIEPRMEHY---GCMVDLFGRAGLLHEAVEF 767
Query: 403 IFETTSEKDVIAWNSIISG 421
I + + D W +++
Sbjct: 768 INKMQVKPDSRLWGALLGA 786
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/609 (34%), Positives = 357/609 (58%), Gaps = 20/609 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+SM+ FG++ A VF M D +S+ V++ Y + + + Y M +
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ F VLK C + DI G ++H +++ G D V L+ MY KC DI ++R +FD
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFD 257
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ ++ +SW +MI+GY +N EGL LF+ MRE V+ + IT+ ++ +AC L
Sbjct: 258 KMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERL 317
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY++K + + +L+ MY G + +A +VF + S D+VSWTAMI
Sbjct: 318 GRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
P KA++ + + P+ +T+ SVLSA A +G+L++G +H + I+ GL + ++
Sbjct: 378 HKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIV 437
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------DDNVS 427
N+L+DMY+KC + +A +F S K+V++W S+I GL +++
Sbjct: 438 SNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKESMK 497
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P++VTL+SV+SACA +GA+ G +HA++ + G+ + ++ A+L+ Y +CG A
Sbjct: 498 PNSVTLISVLSACARIGALMRGKEIHAHALRTGV-GFDGFLPNAILDMYVRCGRKVPALN 556
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F++ + K+ W+ ++ GY QG ++ LF ML E+ P+E+ F ++L ACS +GM
Sbjct: 557 QFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGM 615
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG + F M + P++KHY C+VD+L RAG+L++A +F+++MPI PD +++GA L
Sbjct: 616 VTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALL 675
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
+ C ++ +LGE+ K++ E YY+L+ NLYA G W +V++VR LM++RGLS
Sbjct: 676 NACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSA 735
Query: 668 SPGCSLVDL 676
PGCS V++
Sbjct: 736 DPGCSWVEI 744
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 204/421 (48%), Gaps = 34/421 (8%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L+ MY S G ++ A +VF M + D S+ MI + L VE YK M
Sbjct: 337 NNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGI 396
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQ 201
D VL AC + +D G+++H +K G +++ L+DMY+KC+ + ++ +
Sbjct: 397 LPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALE 456
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF KNVVSWTS+I G N+ + E L+ F +M+E ++ N +TL S+++ACA++ A
Sbjct: 457 VFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGA 515
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +GK +H + L+ G+ + L A+LDMYV+CG A + F+ D+ +W ++ G
Sbjct: 516 LMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTG 574
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRL 376
Y Q G A++LF + P+ +T S+L A ++ G + G M + +
Sbjct: 575 YAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTP 634
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSV 436
L+ Y + VD+ + + DA + D + PDA ++
Sbjct: 635 NLKHYACV---VDILGRAGQLDDAYDFIQ-----------------DMPIRPDAAIWGAL 674
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL--NFYAKCGDAQSARMVFDAMRE 494
++AC V++G + K+ N VG +L N YA CG+ V MRE
Sbjct: 675 LNACRIHRNVELGE----IAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRE 730
Query: 495 K 495
+
Sbjct: 731 R 731
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 188/385 (48%), Gaps = 20/385 (5%)
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
++ + M E +E + +L+ C RA +G ++ + + L AL
Sbjct: 79 EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNAL 138
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L M+V+ GN+ DA VF ++ D+ SW ++ GY ++G D+AL L+ WA+ PN
Sbjct: 139 LSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNV 198
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T SVL A + ++ G+ +H+ IR G E D V NAL+ MY KC I++AR +F+
Sbjct: 199 YTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDK 258
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
++D I+WN++ISG +N V PD +T+ +V SAC L ++G
Sbjct: 259 MPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLG 318
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H Y K ++ + +L+ Y+ G + A VF M K+ V+W+AMI
Sbjct: 319 RGVHGYVVKSE-FGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVS 377
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
++ + M E + P+E+ ++LSAC+ G + G + + + V +
Sbjct: 378 HKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIR-LHEIAIKTGLVSHVI 436
Query: 570 HYVCMVDLLARAGRLEEALEFMENM 594
++D+ ++ ++ ALE N+
Sbjct: 437 VSNSLIDMYSKCKCVDNALEVFRNI 461
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/672 (33%), Positives = 369/672 (54%), Gaps = 36/672 (5%)
Query: 31 TPTQHELDQTFA--SFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCN----- 83
T QH L F SFH L S P L+ + HALL+V G C
Sbjct: 19 TRQQHSLPIHFTVTSFHRLKSPPNLH---------EARTLHALLLVLGFFQPTCPHSSSF 69
Query: 84 -TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
++LV++Y +FG +++A F ++P+ ++ ++R + + FY M +
Sbjct: 70 ASQLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGV 129
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
DN+ + VLKAC L + G VH + + +V ++DM+AKC + +R++
Sbjct: 130 TPDNYTYPLVLKACSSLHALQLGRWVHETMHGKTKANVYVQCAVIDMFAKCGSVEDARRM 189
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+E D+++ SWT++I G + N E L+LF +MR + + + + S++ AC +L A+
Sbjct: 190 FEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAV 249
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G L ++ G E + ++ A++DMY KCG+ +A VF + D+VSW+ +I GY
Sbjct: 250 KLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGY 309
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDY 381
+Q+ ++ KL+ N + SVL A +L L G+ +H+ ++ GL D
Sbjct: 310 SQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDV 369
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------D 424
V +AL+ MYA C I +A IFE TS+KD++ WNS+I G +
Sbjct: 370 VVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGA 429
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
P+ +T+VS++ C +GA++ G +H Y TK GL NV VG +L++ Y+KCG +
Sbjct: 430 EHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGL-GLNVSVGNSLIDMYSKCGFLEL 488
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
VF M +N T++ MI G G G LA + M E +PN+V F ++LSACSH
Sbjct: 489 GEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSH 548
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G++ GW + SM D+ P+M+HY CMVDL+ RAG L+ A +F+ MP+ PD ++FG
Sbjct: 549 AGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFG 608
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
+ L C L+++ +L E++ +++L+L D + +YVL+SNLYAS RW +++VR ++K +G
Sbjct: 609 SLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKG 668
Query: 665 LSKSPGCSLVDL 676
L K PG S + +
Sbjct: 669 LEKKPGSSWIQV 680
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 246/720 (34%), Positives = 391/720 (54%), Gaps = 46/720 (6%)
Query: 1 MKLISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNL----- 55
+ L S RH+ P L+ R YT++ P + Q F++ S P L
Sbjct: 65 LTLASARWRHI---LAPTLKSR---YTSKFLPPRRRPIQLFSAARSSPQFSSYGLGNQNE 118
Query: 56 -------LGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP 107
T K HALL+V G +T+LV++Y + G V +R FD +P
Sbjct: 119 EIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP 178
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
D Y++ MI Y N + + + FY+ + D + F VLKAC L D G
Sbjct: 179 QKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GR 235
Query: 167 KVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
K+HC K+G + FV L+ MY++ G +R +FD+ +++ SW +MI+G +QN
Sbjct: 236 KIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNG 295
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A + L + + MR ++ N +T+ S++ C +L + +H Y++K G+E + +
Sbjct: 296 NAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSN 355
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL++MY K GN+ DAR F ++ D+VSW ++I Y Q+ P A F + F P
Sbjct: 356 ALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP 415
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYI 403
+ +T+ S+ S AQ + R VH +R G +ED + NA+VDMYAK ++ A +
Sbjct: 416 DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKV 475
Query: 404 FETTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGA 445
FE KDVI+WN++I+G N + P+ T VS++ A A +GA
Sbjct: 476 FEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 535
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+Q G +H K L +V+V T L++ Y KCG A +F + ++++VTW+A+I
Sbjct: 536 LQQGMKIHGRVIKTNL-HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIIS 594
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
+G+ G +L LF +ML+E V+P+ V F ++LSACSH+G V EG CF M +++
Sbjct: 595 CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIK 653
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
PS+KHY CMVDLL RAG LE A +F+++MP++PD S++GA L C ++ +LG+ +
Sbjct: 654 PSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDR 713
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
+ E+ YYVL+SN+YA+ G+W V++VR L ++RGL K+PG S ++++ D ++
Sbjct: 714 LFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYT 773
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/647 (36%), Positives = 369/647 (57%), Gaps = 32/647 (4%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
L C + S K HA L+V + C + KLV++Y G+V AR FD + N D Y+
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYA 119
Query: 114 FQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+ +MI Y +++ F M + D F VLKAC R++ +G K+HC
Sbjct: 120 WNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLA 176
Query: 173 VKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+K G D +V L+ +Y + + ++R +FDE +++ SW +MI+GY Q+ A+E L
Sbjct: 177 LKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL 236
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
L +G + +T+ SL++AC + ++G +H Y +K G+E + L+D+Y
Sbjct: 237 TL----SDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
+ G+++D + VFD + DL+SW ++I Y + P +A+ LF + + + P+ +T+
Sbjct: 293 AEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLI 352
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSE 409
S+ S +QLG + R V +R G LED T+ NA+V MYAK ++ AR +F
Sbjct: 353 SLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 410 KDVIAWNSIISGLDDN-------------------VSPDAVTLVSVISACASLGAVQVGS 450
KDVI+WN+IISG N +S + T VSV+ AC+ GA++ G
Sbjct: 413 KDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGM 472
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
LH K GL +V+VGT+L + Y KCG A +F + N+V W+ +I +G
Sbjct: 473 KLHGRLLKNGLYL-DVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFH 531
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G ++ LF +ML+E V+P+ + F T+LSACSH+G+V EG CF M D+ PS+KH
Sbjct: 532 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKH 591
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVDL RAG+LE AL F+++MP++PD S++GA L C ++ DLG++ + + E+
Sbjct: 592 YGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 651
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P+ Y+VL+SN+YAS G+W V+++R + +GL K+PG S +++D
Sbjct: 652 PEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVD 698
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 220/579 (37%), Positives = 341/579 (58%), Gaps = 20/579 (3%)
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG 176
M++ Y + + F+ M+ + F+ +LK C + D+ G ++H ++ G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 177 -GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
+ F +TG+V+MYAKCR I + +FD ++++V W +MI+GY QN A+ L+L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
RM E + IT+ S++ A A R L G +HGY+L+ G E ++ TAL+DMY KCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
++ AR +FD + +VSW +MI GY QSG + A+ +F P +VT+ L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A A LG+L G+ VH L +L L+ D +V+N+L+ MY+KC + A IF+ K +++
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300
Query: 415 WNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
WN++I G N+ PD+ T+VSVI A A L + +H
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
++ L NV+V TAL++ YAKCG +AR +FD M ++ +TW+AMI GYG G G S+
Sbjct: 361 RR-FLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSV 419
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
LF +M ++PN++ F LSACSH+G+V EG F SM +D+ P+M HY MVDL
Sbjct: 420 ELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDL 479
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYY 637
L RAGRL +A +F++ MPI+P ++++GA L C ++ DLGE ++ +L+PD Y+
Sbjct: 480 LGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYH 539
Query: 638 VLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
VL++N+YA+ W +V +VR +M++ GL K+PGCSLV++
Sbjct: 540 VLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEI 578
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 246/522 (47%), Gaps = 26/522 (4%)
Query: 55 LLGLCKSTGSLK---AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
LL LC LK H +I G + N T +V+MY + A ++FD MP D
Sbjct: 36 LLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERD 95
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ MI Y N K + M + D+ +L A + R + GM VH
Sbjct: 96 LVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHG 155
Query: 171 EIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+++ G V T LVDMY+KC + +R +FD + VVSW SMI GYVQ+ A+
Sbjct: 156 YVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEG 215
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+++F +M + V+ +T+ + ACA L L +GK++H + ++ ++ + ++ +L+
Sbjct: 216 AMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLIS 275
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KC + A +F L + LVSW AMI+GY Q+G ++AL F + + + P+ T
Sbjct: 276 MYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFT 335
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+ SV+ A A+L + +H L IR L+ + V+ ALVDMYAKC I AR +F+ +
Sbjct: 336 MVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMN 395
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+ VI WN++I G + + P+ +T + +SAC+ G V+ G
Sbjct: 396 ARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLC 455
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMIGGYGMQ 510
K + + A+++ + G A M K +T + AM+G +
Sbjct: 456 FFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIH 515
Query: 511 G--DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
D G A LN + V+ I + S G V +
Sbjct: 516 KNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAK 557
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 43 SFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARS 101
SF + IP L L + + K H L+I L N T LV MY G + AR
Sbjct: 333 SFTMVSVIPALAELSIPRQA---KWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARK 389
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+FD M ++ MI Y + L K VE +K M+K + ++ F L AC
Sbjct: 390 LFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGL 449
Query: 162 IDEGM 166
++EG+
Sbjct: 450 VEEGL 454
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/648 (35%), Positives = 346/648 (53%), Gaps = 58/648 (8%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++ Y FG V VF M D ++ MI Y N+ + ++ M+ E +
Sbjct: 119 LINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPN 178
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVF 203
F +LKAC +++ ++H +VK G D V T L+ MY+KC +I + ++F
Sbjct: 179 RITFLSILKACNNYSMLEKAREIHT-VVKASGMETDVAVATALITMYSKCGEISLACEIF 237
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ ++NVVSWT++I Q+ E L+ +M + + N +T SL+ +C AL+
Sbjct: 238 QKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALN 297
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
+G+ +H +I + G+E + + AL+ MY KC I+DAR FD + D++SW+AMI GY
Sbjct: 298 RGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYA 357
Query: 324 QSGYPDK-----ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
QSGY DK +L + FPN VT S+L A + G L GR +H+ ++G
Sbjct: 358 QSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGF 417
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFE-----------------------TTSEK---- 410
E D ++ A+ +MYAKC I +A +F T++EK
Sbjct: 418 ESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSE 477
Query: 411 ----DVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
+V++WN +I+G + PD VT++S++ AC +L A++ G
Sbjct: 478 MSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERG 537
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA + K GL S V V T+L+ Y+KCG+ AR VFD + ++TV W+AM+ GYG
Sbjct: 538 KLVHAEAVKLGLESDTV-VATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQ 596
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G ++ LF ML E V PNE+ FT ++SAC G+V EG + F M DF+ P +
Sbjct: 597 HGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQ 656
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVDLL RAGRL+EA EF++ MP EPD+S++ A L C + L E +L L
Sbjct: 657 HYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRL 716
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P A YV +SN+YA GRW +VR++M +GL K G S +++D
Sbjct: 717 EPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEID 764
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 205/410 (50%), Gaps = 29/410 (7%)
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+E + L +++ + N T G ++ CAKLR GK +H + ++G+ I+ +L +L
Sbjct: 60 KEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSL 119
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++ Y K G++ VF + D+V+W++MI Y + +P KA F K A+ PN
Sbjct: 120 INFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNR 179
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
+T S+L A L R +H++ G+E D V AL+ MY+KC I+ A IF+
Sbjct: 180 ITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQK 239
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
E++V++W +II L +SP+AVT VS++++C + A+ G
Sbjct: 240 MKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRG 299
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H++ +++G L ++V V AL+ Y KC Q AR FD M +++ ++WSAMI GY
Sbjct: 300 RRIHSHISERG-LETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ 358
Query: 510 QGDGGGS-----LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G L M E V PN+V F +IL ACS G + +G + ++ F
Sbjct: 359 SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQG-RQIHAEISKVGF 417
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCG 611
+ ++ A+ G + EA + MEN + SL ++ CG
Sbjct: 418 ESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIK-CG 466
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 117/246 (47%), Gaps = 19/246 (7%)
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
++G +A++L K N T ++ A+L G+MVH LGL D
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
+ N+L++ Y+K +A +F + +DV+ W+S+I+ D N
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ P+ +T +S++ AC + ++ +H G + ++V V TAL+ Y+KCG+ A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASG-METDVAVATALITMYSKCGEISLA 233
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+F M+E+N V+W+A+I + L+ ML + PN V F ++L++C+
Sbjct: 234 CEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTP 293
Query: 546 GMVGEG 551
+ G
Sbjct: 294 EALNRG 299
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/631 (36%), Positives = 363/631 (57%), Gaps = 23/631 (3%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K+ H ++ G +D L+ MY F + AR VF+ MP D S+ +I Y N
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+ + +E Y R D++ S VL+AC L ++EG +H I K+G D V
Sbjct: 195 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 254
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
GL+ MY K + R++FD+ + ++ VSW +MI GY Q +E + LF M F +
Sbjct: 255 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF-K 313
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ +T+ S++ AC L L GK++H Y++ G E ++ L++MY KCGN+ ++ V
Sbjct: 314 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 373
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F + D VSW +MI Y Q+G D+A+KLF K D P+ VT +LS S QLG+L
Sbjct: 374 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDL 432
Query: 364 NMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-- 420
++G+ +H ++G V+ N LVDMYAKC + D+ +FE +D+I WN+II+
Sbjct: 433 HLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASC 492
Query: 421 --------GL-------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
GL + V+PD T++S++ C+ L A + G +H K GL S+
Sbjct: 493 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGL-ESD 551
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
V VG L+ Y+KCG +++ VF M+ K+ VTW+A+I GM G+G ++ F +M
Sbjct: 552 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA 611
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
+ P+ V F I+ ACSH+G+V EG F+ M +D+K P ++HY C+VDLL+R+ L+
Sbjct: 612 AGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLD 671
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
+A +F+ +MP++PD S++GA L C + ++ E + ++++EL+PD YYVLVSN+YA
Sbjct: 672 KAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYA 731
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ G+W +V +R+ +K RGL K PGCS +++
Sbjct: 732 ALGKWDQVRSIRKSIKARGLKKDPGCSWMEI 762
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 304/613 (49%), Gaps = 38/613 (6%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFD-SMPNPDFYS 113
L +T L H+L+I GL + + KL++ Y F + SVF + P+ + Y
Sbjct: 23 LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYL 82
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ +IR N L+ + + Y ++ + D + F V+ AC L D + +H ++
Sbjct: 83 WNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 142
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
+G G D ++ L+DMY + D+ +R+VF+E ++VVSW S+I+GY N E L
Sbjct: 143 DMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALE 202
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
++ R R V + T+ S++ AC L ++ +G +HG I KIGI+ + + LL MY
Sbjct: 203 IYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYC 262
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K + D R +FD++ D VSW MI GY+Q G ++++KLF + F P+ +TI S
Sbjct: 263 KFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITS 321
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+L A LG+L G+ VH I G E D T N L++MYAKC + ++ +F KD
Sbjct: 322 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 381
Query: 412 VIAWNSIIS----------------GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
++WNS+I+ + +V PD+VT V ++S LG + +G LH
Sbjct: 382 SVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLHLGKELHCD 441
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K G +SN+ V L++ YAKCG+ + VF+ M+ ++ +TW+ +I D
Sbjct: 442 LAKMG-FNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 500
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK---CFYSMCRDFKFVPSMKHYV 572
L + S M E V P+ +IL CS +G + C + + + VP
Sbjct: 501 GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD-VPVGN--- 556
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH-- 630
++++ ++ G L + + + M + DV + A + CG+Y G+ ++ E+
Sbjct: 557 VLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGE---GKKAVRAFGEMEAA 612
Query: 631 ---PDKACYYVLV 640
PD + ++
Sbjct: 613 GIVPDHVAFVAII 625
Score = 215 bits (547), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 147/528 (27%), Positives = 261/528 (49%), Gaps = 32/528 (6%)
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-L 186
K + ++C R+ L FS + +A + K+H I+ +G S + + L
Sbjct: 2 KTLRVLHECSRQTL-------FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKL 54
Query: 187 VDMYAKCRDIGSSRQVFD-ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
+ YA RD SS VF + NV W S+I N E L L++ + ++ +
Sbjct: 55 IAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPD 114
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T S++ ACA L K +H +L +G + ++ AL+DMY + ++ AR VF+
Sbjct: 115 TYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFE 174
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ D+VSW ++I GY +GY ++AL+++ + P+ T++SVL A LG++
Sbjct: 175 EMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEE 234
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
G ++H L ++G+ +D V N L+ MY K + + D R IF+ +D ++WN++I G
Sbjct: 235 GDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQ 294
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ + PD +T+ S++ AC LG ++ G +H Y G +
Sbjct: 295 VGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG-YECDTTA 353
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
L+N YAKCG+ +++ VF M+ K++V+W++MI Y G ++ LF M+ +V
Sbjct: 354 SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDV 412
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+P+ V + +LS + G + G + + + F ++ +VD+ A+ G + ++L
Sbjct: 413 KPDSVTYVMLLSMSTQLGDLHLGKELHCDLAK-MGFNSNIVVSNTLVDMYAKCGEMGDSL 471
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKA 634
+ ENM D+ + + C +LG MI +M + PD A
Sbjct: 472 KVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMA 518
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 230/655 (35%), Positives = 380/655 (58%), Gaps = 28/655 (4%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
+L C T K HALL+V G + ++ + +LV++Y S G V +R FD + D Y
Sbjct: 81 SLFDSCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVY 140
Query: 113 SFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
++ MI Y N +++ ++ FY+ + + D + F VLKAC L D G K+HC
Sbjct: 141 TWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVD---GRKIHCW 197
Query: 172 IVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
+ K+G D FV L+ MY++ +G +R +FD+ +++ SW +MI+G +QN A +
Sbjct: 198 VFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQA 257
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L + + MR + + +T+ S++ CA+L + +H Y++K G+E + AL++M
Sbjct: 258 LDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINM 317
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y K GN+ DA+ VF ++ D+VSW ++I Y Q+ P A F + P+ +T+
Sbjct: 318 YAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTL 377
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTS 408
S+ S +AQ + R VH +R G +E + NA++DMYAK VI A +F
Sbjct: 378 VSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIP 437
Query: 409 EKDVIAWNSIISGLDDN-VSPDAV-----------------TLVSVISACASLGAVQVGS 450
KDV++WN++ISG N ++ +A+ T VS+++A A +GA+Q G
Sbjct: 438 VKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGM 497
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H + K L +V+VGT L++ Y KCG A +F + +++V W+A+I +G+
Sbjct: 498 RIHGHLIKTNL-HLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIH 556
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L LF +M +E V+P+ V F ++LSACSH+G+V EG K F+ + +++ PS+KH
Sbjct: 557 GHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEG-KWFFHLMQEYGIKPSLKH 615
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVDLL RAG LE A +F+++MP+ PD S++GA L C ++ +LG+ ++ E+
Sbjct: 616 YGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVD 675
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
+ YYVL+SN+YA+ G+W V++VR L ++RGL K+PG S ++++ D ++
Sbjct: 676 SENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYT 730
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/630 (36%), Positives = 363/630 (57%), Gaps = 24/630 (3%)
Query: 67 AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+FH +IVDG ++D T L++ Y FGH + AR VFD+M + + + MI Y
Sbjct: 69 SFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAG 128
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
+ Y MR++ + + +L EL + +H +++ G G D +
Sbjct: 129 EHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALAN 185
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
++++Y KC + ++ +F+ ++V+SW S+++GY Q +E L L RM+ +E
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEP 245
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+Q T GSLV+A A L GK +HG+IL+ G+E +SH+ T+L+ MY+KCGN+ A +F
Sbjct: 246 DQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIF 305
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ + D++SWTAMI G Q+ D A+ +F + P+ TIASVL+A A+LG+
Sbjct: 306 EGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFP 365
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
+G VH +R ++ D N+LV MYAKC + + +F+ S +D+++WN+I+SG
Sbjct: 366 LGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHA 425
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N PD++T+VS++ ACAS+GA+ G +H + TK L +
Sbjct: 426 QNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTK-SCLGPCI 484
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ TAL++ Y+KCGD SA+ FD M +++ V+WS++I GYG G G +L ++SD L+
Sbjct: 485 LIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHT 544
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
+QPN VI+ +ILSACSH G+V +G F+SM +DF P ++H C+VDLL+RAGR+EE
Sbjct: 545 GIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEE 604
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
A F + M +P + + G L C +LG+++ ++++ L P A YV +++ YAS
Sbjct: 605 AYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYAS 664
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
RW V +V MK L K PG S ++L
Sbjct: 665 MKRWDGVGEVWTQMKSLHLKKLPGWSFIEL 694
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/399 (28%), Positives = 194/399 (48%), Gaps = 28/399 (7%)
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L+ ++ M + T SLV AC L G H ++ G +S++ T+L++
Sbjct: 33 LLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINF 92
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y K G+ + AR VFD + ++V WT MI YT++G D A ++ + P+ VT+
Sbjct: 93 YSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTM 152
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSE 409
+LS +L +L + +H+ I+ G D + N+++++Y KC + DA+ +FE
Sbjct: 153 LGLLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDA 209
Query: 410 KDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSL 452
+DVI+WNS++SG D + PD T S++SA A + VG +
Sbjct: 210 RDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMV 269
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H + + G L + ++ T+L+ Y KCG+ SA +F+ M K+ ++W+AMI G
Sbjct: 270 HGHILRAG-LEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDC 328
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKF-VPSMKH 570
++ +F ML V P+ ++L+AC+ G G Y + + K +PS
Sbjct: 329 ADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNS 388
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
V M A+ G LE++ + M D+ + A + G
Sbjct: 389 LVTM---YAKCGHLEQSCSVFDRMS-RRDIVSWNAIVSG 423
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 105/239 (43%), Gaps = 43/239 (17%)
Query: 420 SGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
S L + PDA T S++ AC SL G S H G SS+ Y+ T+L+NFY+K
Sbjct: 38 SMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDG-YSSDSYIATSLINFYSKF 96
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G QSAR VFD M ++N V W+ MIG Y G+ + ++++ M + +QP+ V +L
Sbjct: 97 GHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLL 156
Query: 540 SA--------CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC------------------ 573
S C H ++ Y D SM + C
Sbjct: 157 SGVLELVHLQCLHACVIQ------YGFGSDVALANSMLNVYCKCGRVEDAQALFELMDAR 210
Query: 574 -------MVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVM 622
+V A+ G + E L+ + M IEPD FG+ + + S+ +G+++
Sbjct: 211 DVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMV 269
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/670 (36%), Positives = 372/670 (55%), Gaps = 27/670 (4%)
Query: 36 ELDQTFASFHSLPSIP----CLNLLGLCK----STGSLKAFHALLIVDGLTNDKCNTKLV 87
EL Q S P P + L LC+ + L+A G + ++
Sbjct: 77 ELQQALWLLESSPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLGNAML 136
Query: 88 SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
SM FG +A VF MP D +S+ VM+ Y ++ ++ Y M D +
Sbjct: 137 SMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVY 196
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F VL++C + D+ G +VH +++ G G + VL LV MYAKC D+ ++R+VFD
Sbjct: 197 TFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGM 256
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ +SW +MIAG+ +N + GL LF M E VE N +T+ S+ A L L K
Sbjct: 257 SLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAK 316
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+H +K G + +L+ MY G + +A +VF + + D +SWTAMI GY ++G
Sbjct: 317 EIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNG 376
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-N 385
+PDKAL+++ + + P+ VT+AS L+A A LG L++G +H L G Y V+ N
Sbjct: 377 FPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVAN 436
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------VSPD 429
ALV+MYAK +I A +F+ +KDVI+W+S+I+G N V P+
Sbjct: 437 ALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLADVKPN 496
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+VT ++ ++ACA+ G+++ G +HA+ +QG+ S YV ALL+ Y KCG A F
Sbjct: 497 SVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEG-YVPNALLDLYVKCGQTGYAWAQF 555
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
A K+ V+W+ M+ G+ G G +L+ F++ML P+EV F +L CS GMV
Sbjct: 556 GAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVS 615
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+GW+ F+SM + VP++KHY CMVDLL+R GRL E F+ MPI PD +++GA L+G
Sbjct: 616 QGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNG 675
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C ++ +LGE+ K +LEL P+ A Y+VL+S+LYA G W V++VR+ M+ +GL
Sbjct: 676 CRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDY 735
Query: 670 GCSLVDLDIA 679
GCS V++ A
Sbjct: 736 GCSWVEVKGA 745
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/646 (35%), Positives = 370/646 (57%), Gaps = 31/646 (4%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
L C + S K HA L+V + C + KLV++Y G+V AR FD + N D Y+
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 114 FQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+ +MI Y +++ F M D F VLKAC R + +G K+HC
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLA 176
Query: 173 VKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+K G D +V L+ +Y++ + +G++R +FDE +++ SW +MI+GY Q+ A+E L
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
L N +R + +T+ SL++AC + ++G +H Y +K G+E + L+D+Y
Sbjct: 237 TLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
+ G +RD + VFD + DL+SW ++I Y + P +A+ LF + + + P+ +T+
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSE 409
S+ S +QLG++ R V +R G LED T+ NA+V MYAK ++ AR +F
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 410 KDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSS 451
DVI+WN+IISG N ++ + T VSV+ AC+ GA++ G
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
LH K GL +V+V T+L + Y KCG + A +F + N+V W+ +I +G G
Sbjct: 473 LHGRLLKNGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G ++ LF +ML+E V+P+ + F T+LSACSH+G+V EG CF M D+ PS+KHY
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CMVD+ RAG+LE AL+F+++M ++PD S++GA L C ++ DLG++ + + E+ P
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 651
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ Y+VL+SN+YAS G+W V+++R + +GL K+PG S +++D
Sbjct: 652 EHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/630 (36%), Positives = 363/630 (57%), Gaps = 24/630 (3%)
Query: 67 AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+FH +IVDG ++D T L++ Y FGH + AR VFD+M + + + MI Y
Sbjct: 69 SFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAG 128
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
+ Y MR++ + + +L EL + +H +++ G G D +
Sbjct: 129 EHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHLQ---CLHACVIQYGFGSDVALAN 185
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
++++Y KC + ++ +F+ ++V+SW S+++GY Q +E L L RM+ +E
Sbjct: 186 SMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEP 245
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+Q T GSLV+A A L GK +HG+IL+ G+E +SH+ T+L+ MY+KCGN+ A +F
Sbjct: 246 DQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIF 305
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ + D++SWTAMI G Q+ D A+ +F + P+ TIASVL+A A+LG+
Sbjct: 306 EGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFP 365
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
+G VH +R ++ D N+LV MYAKC + + +F+ S +D+++WN+I+SG
Sbjct: 366 LGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHA 425
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N PD++T+VS++ ACAS+GA+ G +H + TK L +
Sbjct: 426 QNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKS-CLGPCI 484
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ TAL++ Y+KCGD SA+ FD M +++ V+WS++I GYG G G +L ++SD L+
Sbjct: 485 LIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHT 544
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
+QPN VI+ +ILSACSH G+V +G F+SM +DF P ++H C+VDLL+RAGR+EE
Sbjct: 545 GIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEE 604
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
A F + M +P + + G L C +LG+++ ++++ L P A YV +++ YAS
Sbjct: 605 AYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYAS 664
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
RW V +V MK L K PG S ++L
Sbjct: 665 MKRWDGVGEVWTQMKSLHLKKLPGWSFIEL 694
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 188/382 (49%), Gaps = 28/382 (7%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T SLV AC L G H ++ G +S++ T+L++ Y K G+ + AR VFD +
Sbjct: 50 TFPSLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTM 109
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
++V WT MI YT++G D A ++ + P+ VT+ +LS +L +L +
Sbjct: 110 DDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---Q 166
Query: 368 MVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---- 422
+H+ I+ G D + N+++++Y KC + DA+ +FE +DVI+WNS++SG
Sbjct: 167 CLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLG 226
Query: 423 -------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
D + PD T S++SA A + VG +H + + G L + ++
Sbjct: 227 NIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAG-LEQDSHIE 285
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
T+L+ Y KCG+ SA +F+ M K+ ++W+AMI G ++ +F ML V
Sbjct: 286 TSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVM 345
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKF-VPSMKHYVCMVDLLARAGRLEEA 587
P+ ++L+AC+ G G Y + + K +PS V M A+ G LE++
Sbjct: 346 PSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTM---YAKCGHLEQS 402
Query: 588 LEFMENMPIEPDVSLFGAFLHG 609
+ M D+ + A + G
Sbjct: 403 CSVFDRMS-RRDIVSWNAIVSG 423
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 43/245 (17%)
Query: 420 SGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
S L + PDA T S++ AC SL G S H G SS+ Y+ T+L+NFY+K
Sbjct: 38 SMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDG-YSSDSYIATSLINFYSKF 96
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G QSAR VFD M ++N V W+ MIG Y G+ + ++++ M + +QP+ V +L
Sbjct: 97 GHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLL 156
Query: 540 SA--------CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC------------------ 573
S C H ++ G+ D SM + C
Sbjct: 157 SGVLELVHLQCLHACVIQYGFG------SDVALANSMLNVYCKCGRVEDAQALFELMDAR 210
Query: 574 -------MVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+V A+ G + E L+ + M IEPD FG+ + + S+ +G+++
Sbjct: 211 DVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVH 270
Query: 624 KKMLE 628
+L
Sbjct: 271 GHILR 275
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/645 (34%), Positives = 367/645 (56%), Gaps = 21/645 (3%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L LL + L A LI+ G+ D + TKL + G V + R +F+ + PD
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ F V+IR + N L K + Y +RK+ DNF ++ + A L D G+ +H
Sbjct: 78 FLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHA 137
Query: 171 E-IVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
IV + FV + +VD+Y K +R+VFD +++ V W +MI+G+ +N ++
Sbjct: 138 HSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFED 197
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ +F M + + + TL +++TA A+L+ G + K G+ + +++T L+
Sbjct: 198 SIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLIS 257
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+Y KCG R +FD++ DL+S+ AMI GYT + + A+ LF + + N T
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTS 408
+ ++ +L + R++ +L +++G+ +V AL +Y + + + AR +F+ +
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377
Query: 409 EKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
EK + +WN++ISG N +SP+ VT+ S++SACA LGA+ +G +
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWV 437
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H K L SNVYV TAL++ YAKCG AR +FD M +KN VTW+AMI GYG+ G
Sbjct: 438 HGL-IKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
G +L LF +ML + P V F +IL ACSH+G+V EG + F+SM ++ F P +HY
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
CMVD+L RAG+L ALEF+E MP+EP +++GA L C ++ ++ V K++ +L P+
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPE 616
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YYVL+SN+Y++D + + VR+++K+R L+K+PGC+L+++D
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEID 661
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 229/631 (36%), Positives = 362/631 (57%), Gaps = 23/631 (3%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K+ H ++ G +D L+ MY F + AR VF+ MP D S+ +I Y N
Sbjct: 194 KSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 253
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+ + +E Y R D++ S VL+AC L ++EG +H I K+G D V
Sbjct: 254 GYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVN 313
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
GL+ MY K + R++FD+ + ++ VSW +MI GY Q +E + LF M F +
Sbjct: 314 NGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF-K 372
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ +T+ S++ AC L L GK++H Y++ G E ++ L++MY KCGN+ ++ V
Sbjct: 373 PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEV 432
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F + D VSW +MI Y Q+G D+A+KLF K D P+ VT +LS S QLG+L
Sbjct: 433 FSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDL 491
Query: 364 NMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-- 420
+G+ +H ++G V+ N LVDMYAKC + D+ +FE +D+I WN+II+
Sbjct: 492 XLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASC 551
Query: 421 --------GL-------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
GL + V+PD T++S++ C+ L A + G +H K GL S+
Sbjct: 552 VHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGL-ESD 610
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
V VG L+ Y+KCG +++ VF M+ K+ VTW+A+I GM G+G ++ F +M
Sbjct: 611 VPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEA 670
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
+ P+ V F I+ ACSH+G+V EG F+ M +D+K P ++HY C+VDLL+R+ L+
Sbjct: 671 AGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLD 730
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
+A +F+ +MP++PD S++GA L C + ++ + + ++++EL+PD YYVLVSN+YA
Sbjct: 731 KAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGYYVLVSNVYA 790
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ G+W +V +R+ +K RGL K PGCS +++
Sbjct: 791 ALGKWDQVRSIRKSIKARGLKKDPGCSWMEI 821
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/613 (29%), Positives = 304/613 (49%), Gaps = 38/613 (6%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFD-SMPNPDFYS 113
L +T L H+L+I GL + + KL++ Y F + SVF + P+ + Y
Sbjct: 82 LASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYX 141
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ +IR N L+ + + Y ++ + D + F V+ AC L D + +H ++
Sbjct: 142 WNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVL 201
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
+G G D ++ L+DMY + D+ +R+VF+E ++VVSW S+I+GY N E L
Sbjct: 202 XMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALE 261
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
++ R R V + T+ S++ AC L ++ +G +HG I KIGI+ + + LL MY
Sbjct: 262 IYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYC 321
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K + D R +FD++ D VSW MI GY+Q G ++++KLF + F P+ +TI S
Sbjct: 322 KFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMV-NQFKPDLLTITS 380
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+L A LG+L G+ VH I G E D T N L++MYAKC + ++ +F KD
Sbjct: 381 ILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKD 440
Query: 412 VIAWNSIIS----------------GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
++WNS+I+ + +V PD+VT V ++S LG + +G LH
Sbjct: 441 SVSWNSMINVYIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLSMSTQLGDLXLGKELHCD 500
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K G +SN+ V L++ YAKCG+ + VF+ M+ ++ +TW+ +I D
Sbjct: 501 LAKMG-FNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNL 559
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK---CFYSMCRDFKFVPSMKHYV 572
L + S M E V P+ +IL CS +G + C + + + VP
Sbjct: 560 GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESD-VPVGN--- 615
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH-- 630
++++ ++ G L + + + M + DV + A + CG+Y G+ ++ E+
Sbjct: 616 VLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWTALISACGMYGE---GKKAVRAFGEMEAA 671
Query: 631 ---PDKACYYVLV 640
PD + ++
Sbjct: 672 GIVPDHVAFVAII 684
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/528 (27%), Positives = 261/528 (49%), Gaps = 32/528 (6%)
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-L 186
K + ++C R+ L FS + +A + K+H I+ +G S + + L
Sbjct: 61 KTLRVLHECSRQTL-------FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKL 113
Query: 187 VDMYAKCRDIGSSRQVFD-ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
+ YA RD SS VF + NV W S+I N E L L++ + ++ +
Sbjct: 114 IAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPD 173
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T S++ ACA L K +H +L +G + ++ AL+DMY + ++ AR VF+
Sbjct: 174 TYTFPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFE 233
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ D+VSW ++I GY +GY ++AL+++ + P+ T++SVL A LG++
Sbjct: 234 EMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEE 293
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
G ++H L ++G+ +D V N L+ MY K + + D R IF+ +D ++WN++I G
Sbjct: 294 GDIIHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQ 353
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ + PD +T+ S++ AC LG ++ G +H Y G +
Sbjct: 354 VGLYEESIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG-YECDTTA 412
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
L+N YAKCG+ +++ VF M+ K++V+W++MI Y G ++ LF M+ +V
Sbjct: 413 SNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDV 471
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+P+ V + +LS + G + G + + + F ++ +VD+ A+ G + ++L
Sbjct: 472 KPDSVTYVMLLSMSTQLGDLXLGKELHCDLAK-MGFNSNIVVSNTLVDMYAKCGEMGDSL 530
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKA 634
+ ENM D+ + + C +LG MI +M + PD A
Sbjct: 531 KVFENMKAR-DIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMA 577
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/643 (36%), Positives = 358/643 (55%), Gaps = 27/643 (4%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVS----MYGSFGHVKYARSVFDSMPNPDFYSFQ 115
KS + K HA I GL + + L+S Y FG +AR +FD + NP +S+
Sbjct: 32 KSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELRNPSLFSWN 91
Query: 116 VMIRWYFLNDL-YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MIR Y + L Y + F + + + DN+ + V+KAC + + G +H V
Sbjct: 92 AMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVM 151
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
G D+FV L+ MY C ++ +R+VFD ++ +VSW +MI GY +N C +E L++
Sbjct: 152 SGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMV 211
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
F+ M +E + T+ S++ C+ L+ L G+ +H + + + + +LLDMY K
Sbjct: 212 FDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAK 271
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CGN+ +A+ +F E+ D+VSWT M+ GY +G AL L ++ PN VT+ASV
Sbjct: 272 CGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASV 331
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDV 412
LSA A L +L GR +H IR LE ++ AL+DMYAKC+ + + +F TS++
Sbjct: 332 LSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRT 391
Query: 413 IAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
WN+IISG L + V P+ TL S++ A A L +Q ++H Y
Sbjct: 392 APWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGY 451
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM--REKNTVTWSAMIGGYGMQGDG 513
+ G LS + V T L++ Y+KCG +SA +F+ + ++K+ +TWSA+I GYGM G G
Sbjct: 452 LIRSGFLS-RIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHG 510
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+++LF M+ V+PNE+ FT+IL ACSH G+V EG F M D + HY C
Sbjct: 511 ETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTC 570
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
++DLL RAGRLEEA E + M P+ +++GA L C ++ +LGEV K + EL P
Sbjct: 571 VIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGN 630
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YVL++N+Y++ GRW VR +M GL K+P SL+++
Sbjct: 631 TGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSS--NVYVGTALLNFYAKCGDAQSARMVFDAM 492
S++ C S ++ +HA++ GLLSS + ++ ++L YA G A AR +FD +
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ-PNEVIFTTILSAC 542
R + +W+AMI Y G +L LF ML + P+ + ++ AC
Sbjct: 83 RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKAC 133
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/645 (34%), Positives = 372/645 (57%), Gaps = 23/645 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L LC SL K H+++I +G++ D+ KLV MY + G + R +FD + N
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 158
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ + +++ Y +++ V +K M+K + + F+ VLK L + E +VH
Sbjct: 159 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 218
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
++K+G G ++ V+ L+ Y K + S+ +FDE + +VVSW SMI G V N +
Sbjct: 219 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 278
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
GL +F +M VE + TL S++ ACA + L G+ LHG+ +K LL
Sbjct: 279 NGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLL 338
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KCGN+ A VF ++ +VSWT++I Y + G A+ LF + + P+
Sbjct: 339 DMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 398
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
T+ S++ A A +L+ GR VHS I+ G+ + V NAL++MYAKC + +AR +F
Sbjct: 399 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 458
Query: 408 SEKDVIAWNSIISGLDDNV----------------SPDAVTLVSVISACASLGAVQVGSS 451
KD+++WN++I G N+ PD +T+ V+ ACA L A+ G
Sbjct: 459 PVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGRE 518
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+H + ++G S +++V AL++ YAKCG A+++FD + +K+ ++W+ MI GYGM G
Sbjct: 519 IHGHILRRGYFS-DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 577
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G +++ F++M ++P+E F+ IL+ACSH+G++ EGWK F SM + P ++HY
Sbjct: 578 FGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 637
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C+VDLLAR G L +A +F+E+MPI+PD +++G L GC ++ L E + + + EL P
Sbjct: 638 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 697
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
D YYV+++N+YA +W V ++R+ M++RG ++PGCS +++
Sbjct: 698 DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEV 742
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/517 (30%), Positives = 265/517 (51%), Gaps = 31/517 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ VL+ C E + +++G +VH I+ G D + LV MY C D+ R++FD+ +
Sbjct: 97 YCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIM 156
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+ V W +++ Y + +E + LF +M++ V GN T ++ A L + + K
Sbjct: 157 NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 216
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HGY+LK+G N+ +V +L+ Y K G + A ++FDEL D+VSW +MI G +G+
Sbjct: 217 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 276
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NA 386
L++F + T+ SVL A A +GNL++GR +H G++ + V N
Sbjct: 277 SGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNT 336
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS------------GLDDN-----VSPD 429
L+DMY+KC + A +F + +++W SII+ GL D V PD
Sbjct: 337 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPD 396
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T+ S++ ACA ++ G +H+Y K G + SN+ V AL+N YAKCG + AR+VF
Sbjct: 397 IYTVTSIVHACACSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARLVF 455
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+ K+ V+W+ MIGGY +L LF DM ++ +P+++ +L AC+ +
Sbjct: 456 SKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALD 514
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVC-MVDLLARAGRLEEALEFMENMP----IEPDVSLFG 604
+G + + R F S H C +VD+ A+ G L A + +P I V + G
Sbjct: 515 KGREIHGHILRRGYF--SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 572
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
+HG G + E+ I + PD++ + +++
Sbjct: 573 YGMHGFGNEAISTFNEMRIAG---IEPDESSFSAILN 606
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/613 (36%), Positives = 349/613 (56%), Gaps = 20/613 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L+ +Y G ++ AR +FD MPN D + VM+ + V+ ++ MR +
Sbjct: 11 SSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTK 70
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQV 202
++ F+ VL C + G ++H ++ G D V LV MY+K + + ++
Sbjct: 71 PNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKL 130
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ D NVV+W MIAG+VQN E +LF+ M V + IT S + + + +L
Sbjct: 131 FNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASL 190
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
QGK +HGYIL+ GI ++ L +AL+D+Y KC ++ A +F + ++D+V TA+I GY
Sbjct: 191 KQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGY 250
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
+G + AL++F PN VT+ASVL A A L LN+G+ +H+ ++ GL++
Sbjct: 251 VLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERR 310
Query: 383 -VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP------------- 428
V +A++DMYAKC + A IF EKD + WN+II+ N P
Sbjct: 311 HVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGRE 370
Query: 429 ----DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
D V++ + +SACA+L A+ G ++H++ K G S V+ +AL++ Y KCG+
Sbjct: 371 GLSYDCVSISAALSACANLPALHHGKAIHSFMIK-GAFDSEVFAESALIDMYGKCGNLSV 429
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR VFD MREKN V+W+++I YG G SLALF ML + +QP+ V F TILSAC H
Sbjct: 430 ARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGH 489
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G V +G + F M ++ M+HY C+VDL RAGRL EA E ++NMP PD ++G
Sbjct: 490 AGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWG 549
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
L C ++ +L EV + +L+L P+ + YVL+SN++A G+W V ++R LMK+RG
Sbjct: 550 TLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRG 609
Query: 665 LSKSPGCSLVDLD 677
+ K PG S ++++
Sbjct: 610 VQKVPGYSWIEVN 622
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/549 (28%), Positives = 257/549 (46%), Gaps = 65/549 (11%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D FV + L+ +YA+ I +R++FD+ +K+ V W M+ G+V+ + +F MR
Sbjct: 6 DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ N IT S+++ CA G LHG ++ G + + AL+ MY K G +
Sbjct: 66 NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DA +F+ + ++V+W MI G+ Q+G+ D+A LF++ A P+ +T AS L +
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185
Query: 359 QLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ +L G+ +H +R G+ D + +AL+D+Y KC + A IF+ ++ D++ +
Sbjct: 186 ESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTA 245
Query: 418 IISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
IISG L++ +SP+AVTL SV+ ACA L + +G LHA K G
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG 305
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
L +VG+A+++ YAKCG A +F M EK+ V W+A+I G ++ LF
Sbjct: 306 -LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLF 364
Query: 521 SDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEGW----------------- 552
M E + + V + LSAC+ H+ M+ +
Sbjct: 365 RQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKC 424
Query: 553 ------KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM---PIEPDVSLF 603
+C + M R+ V + ++ G LE +L M I+PD F
Sbjct: 425 GNLSVARCVFDMMREKNEVS----WNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTF 480
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELH--PDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
L CG + D G + M E + P + +Y + +L+ GR R+N+ E +K
Sbjct: 481 LTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLF---GRAGRLNEAFETIK 537
Query: 662 QRGLSKSPG 670
S G
Sbjct: 538 NMPFSPDDG 546
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 23/355 (6%)
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
+G ++ + ++L+ +Y + G I DAR +FD++ + D V W M+ G+ + G P+ A+K+
Sbjct: 1 MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
F D + PN +T ASVLS A G +H L I G D V NALV MY+K
Sbjct: 61 FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSV 436
++DA +F T + +V+ WN +I+G N VSPD++T S
Sbjct: 121 FGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASF 180
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ + +++ G +H Y + G ++ +V++ +AL++ Y KC D A +F +
Sbjct: 181 LPSVTESASLKQGKEIHGYILRHG-IALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVD 239
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V +A+I GY + G +L +F +L E++ PN V ++L AC+ + G +
Sbjct: 240 IVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHA 299
Query: 557 SMCRDFKFVPSMKHY-VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
++ + + +H ++D+ A+ GRL+ A + MP E D + A + C
Sbjct: 300 NILK--HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMP-EKDAVCWNAIITNC 351
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 224/645 (34%), Positives = 366/645 (56%), Gaps = 21/645 (3%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L LL + L A LI+ G+ D + TKL + G V + R +F+ + PD
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ F V+IR + N L K + Y +RK DNF ++ + A L D G+ +H
Sbjct: 78 FLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHA 137
Query: 171 E-IVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
IV + FV + +VD+Y K +R+VFD +++ V W +MI+G+ +N ++
Sbjct: 138 HSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFED 197
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ +F M + + + TL +++TA A+L+ G + K G+ + +++T L+
Sbjct: 198 SIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLIS 257
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+Y KCG R +FD++ DL+S+ AMI GYT + + A+ LF + + N T
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTS 408
+ ++ +L + R++ +L +++G+ +V AL +Y + + + AR +F+ +
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377
Query: 409 EKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
EK + +WN++ISG N +SP+ VT+ S++SACA LGA+ +G +
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMPQLSPNPVTVTSILSACAQLGALSIGKWV 437
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H K L SNVYV TAL++ YAKCG AR +FD M +KN VTW+AMI GYG+ G
Sbjct: 438 HGL-IKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGH 496
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
G +L LF +ML + P V F +IL ACSH+G+V EG + F+SM ++ F P +HY
Sbjct: 497 GKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYA 556
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
CMVD+L RAG+L ALEF+E MP+EP +++GA L C ++ ++ V K++ +L P+
Sbjct: 557 CMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPE 616
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YYVL+SN+Y++D + + VR+++K+R L+K+PGC+L+++D
Sbjct: 617 NVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEID 661
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/610 (37%), Positives = 343/610 (56%), Gaps = 22/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY F + AR VF+ M N D S+ +I Y N ++D ++ Y R D
Sbjct: 162 LIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPD 221
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F S VL AC L + EG+ VH I K+G D + GL+ MY K + +R+VF
Sbjct: 222 CFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFS 281
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ K+ V+W +MI GY Q + + LF M +GFV + +++ S + AC + L
Sbjct: 282 KMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVP-DMLSITSTIRACGQSGDLQV 340
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK++H Y++ G E ++ L+DMY KCG++ A+ VFD D V+W ++I GYTQ
Sbjct: 341 GKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ 400
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
SGY + L+ F K + P+ VT +LS +QL ++N GR +H I+ G E +I
Sbjct: 401 SGYYKEGLESFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELII 459
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---LDD--------------NV 426
N+L+D+YAKC + D +F S D+I+WN++I+ DD +
Sbjct: 460 GNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGL 519
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T++ ++ C+ L + G +H Y K G SNV +G AL+ Y+KCG ++
Sbjct: 520 MPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGF-ESNVPIGNALIEMYSKCGSLENCI 578
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF M+EK+ VTW+A+I +GM G+G +L F DM V P+ V F + ACSH+G
Sbjct: 579 KVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSG 638
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
MV EG + F M D+ P M+HY C+VDLLAR+G L +A EF+ +MP++PD SL+GA
Sbjct: 639 MVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGAL 698
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ + + KK+LEL+ D YYVLVSN+YA+ G+W +V VR MK +GL
Sbjct: 699 LSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLK 758
Query: 667 KSPGCSLVDL 676
K PG S +++
Sbjct: 759 KEPGSSWIEI 768
Score = 265 bits (676), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 182/619 (29%), Positives = 303/619 (48%), Gaps = 38/619 (6%)
Query: 15 KKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIV 74
K PK F N P+Q L + L L K+T L+ H+L+I
Sbjct: 2 KPPKFCSNF---NNTPEPSQEFLRSSL-----------LKTLSSAKNTPQLRTVHSLIIT 47
Query: 75 DGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDLYKDIVE 132
GL+ + KL+S Y + SVF S+ P + Y + +IR N L+ +
Sbjct: 48 SGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALG 107
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
+Y MR++ + D F F V+ +C + D++ G VH +++G D ++ L+DMY+
Sbjct: 108 YYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYS 167
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
+ D+ ++R VF+E +++ VSW S+I+GY N ++ L ++++ R + + T+ S
Sbjct: 168 RFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSS 227
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
++ AC L A+ +G +HG I KIGI + + LL MY K +R+AR VF ++ D
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD 287
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
V+W MI GY Q G + ++KLF D F P+ ++I S + A Q G+L +G+ VH
Sbjct: 288 SVTWNTMICGYAQLGRHEASVKLFMD-MIDGFVPDMLSITSTIRACGQSGDLQVGKFVHK 346
Query: 372 LGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----- 425
I G E D N L+DMYAKC + A+ +F+TT KD + WNS+I+G +
Sbjct: 347 YLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKE 406
Query: 426 -----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
PD+VT V ++S + L + G +H K G + + +G +LL+
Sbjct: 407 GLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFG-FEAELIIGNSLLD 465
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
YAKCG+ VF M + ++W+ +I D + ++M E + P+E
Sbjct: 466 VYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEAT 525
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
IL CS + +G K + F ++ ++++ ++ G LE ++ + M
Sbjct: 526 VLGILPMCSLLAVRRQG-KEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYM 584
Query: 595 PIEPDVSLFGAFLHGCGLY 613
E DV + A + G+Y
Sbjct: 585 K-EKDVVTWTALISAFGMY 602
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/610 (37%), Positives = 343/610 (56%), Gaps = 22/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY F + AR VF+ M N D S+ +I Y N ++D ++ Y R D
Sbjct: 162 LIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPD 221
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F S VL AC L + EG+ VH I K+G D + GL+ MY K + +R+VF
Sbjct: 222 CFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFS 281
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ K+ V+W +MI GY Q + + LF M +GFV + +++ S + AC + L
Sbjct: 282 KMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVP-DMLSITSTIRACGQSGDLQV 340
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK++H Y++ G E ++ L+DMY KCG++ A+ VFD D V+W ++I GYTQ
Sbjct: 341 GKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQ 400
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
SGY + L+ F K + P+ VT +LS +QL ++N GR +H I+ G E +I
Sbjct: 401 SGYYKEGLESFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELII 459
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---LDD--------------NV 426
N+L+D+YAKC + D +F S D+I+WN++I+ DD +
Sbjct: 460 GNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGL 519
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T++ ++ C+ L + G +H Y K G SNV +G AL+ Y+KCG ++
Sbjct: 520 MPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGF-ESNVPIGNALIEMYSKCGSLENCI 578
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF M+EK+ VTW+A+I +GM G+G +L F DM V P+ V F + ACSH+G
Sbjct: 579 KVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSG 638
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
MV EG + F M D+ P M+HY C+VDLLAR+G L +A EF+ +MP++PD SL+GA
Sbjct: 639 MVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGAL 698
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ + + KK+LEL+ D YYVLVSN+YA+ G+W +V VR MK +GL
Sbjct: 699 LSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLK 758
Query: 667 KSPGCSLVDL 676
K PG S +++
Sbjct: 759 KEPGSSWIEI 768
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 182/619 (29%), Positives = 303/619 (48%), Gaps = 38/619 (6%)
Query: 15 KKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIV 74
K PK F N P+Q L + L L K+T L+ H+L+I
Sbjct: 2 KPPKFCSNF---NNTPEPSQEFLRSSL-----------LKTLSSAKNTPQLRTVHSLIIT 47
Query: 75 DGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDLYKDIVE 132
GL+ + KL+S Y + SVF S+ P + Y + +IR N L+ +
Sbjct: 48 SGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALG 107
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
+Y MR++ + D F F V+ +C + D++ G VH +++G D ++ L+DMY+
Sbjct: 108 YYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYS 167
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
+ D+ ++R VF+E +++ VSW S+I+GY N ++ L ++++ R + + T+ S
Sbjct: 168 RFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSS 227
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
++ AC L A+ +G +HG I KIGI + + LL MY K +R+AR VF ++ D
Sbjct: 228 VLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKD 287
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
V+W MI GY Q G + ++KLF D F P+ ++I S + A Q G+L +G+ VH
Sbjct: 288 SVTWNTMICGYAQLGRHEASVKLFMD-MIDGFVPDMLSITSTIRACGQSGDLQVGKFVHK 346
Query: 372 LGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----- 425
I G E D N L+DMYAKC + A+ +F+TT KD + WNS+I+G +
Sbjct: 347 YLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKE 406
Query: 426 -----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
PD+VT V ++S + L + G +H K G + + +G +LL+
Sbjct: 407 GLESFKMMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFG-FEAELIIGNSLLD 465
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
YAKCG+ VF M + ++W+ +I D + ++M E + P+E
Sbjct: 466 VYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEAT 525
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
IL CS + +G K + F ++ ++++ ++ G LE ++ + M
Sbjct: 526 VLGILPMCSLLAVRRQG-KEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYM 584
Query: 595 PIEPDVSLFGAFLHGCGLY 613
E DV + A + G+Y
Sbjct: 585 K-EKDVVTWTALISAFGMY 602
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 354/648 (54%), Gaps = 22/648 (3%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ LN ++ + + L++ G D T L++M+ G + A VFD++P
Sbjct: 215 VSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT 274
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D ++ MI + +K ++ M + + D F +L+AC +++G KV
Sbjct: 275 RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKV 334
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H + +VG + +V T ++ MY KC + + +VFD +NVVSWT+MIAG+ Q+
Sbjct: 335 HARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E + FN+M E +E N++T S++ AC+ AL +G+ + +I++ G + + TAL
Sbjct: 395 DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTAL 454
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L MY KCG+++DA VF+++ ++V+W AMI Y Q D AL F PN
Sbjct: 455 LSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNS 514
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T S+L+ +L +G+ VH L ++ GLE D V NALV M+ C + A+ +F
Sbjct: 515 STFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFND 574
Query: 407 TSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
++D+++WN+II+G + + PD +T +++ACAS A+ G
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
LHA T + +V VGT L++ Y KCG + A VF + +KN +W++MI GY
Sbjct: 635 RRLHALIT-EAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQ 693
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L LF M E V+P+ + F LSAC+H G++ EG F SM ++F P M+
Sbjct: 694 HGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRME 752
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVDL RAG L EA+EF+ M +EPD ++GA L C ++ +L E +K LEL
Sbjct: 753 HYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLEL 812
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P+ +V++SN+YA+ G W V ++R++M RG+ K PG S +++D
Sbjct: 813 DPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVD 860
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 206/405 (50%), Gaps = 21/405 (5%)
Query: 33 TQH-ELDQTFASFHSL------PS-IPCLNLLGLCKSTGSLKAFHAL---LIVDGL-TND 80
QH +D+ F F+ + P+ + +++LG C S +LK + +I G ++D
Sbjct: 389 AQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDD 448
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+ T L+SMY G +K A VF+ + + ++ MI Y ++ Y + + ++ + K
Sbjct: 449 RVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKE 508
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
+ ++ F+ +L C ++ G VH I+K G D V LV M+ C D+ S+
Sbjct: 509 GIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSA 568
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
+ +F++ +++VSW ++IAG+VQ+ Q F M+E ++ ++IT L+ ACA
Sbjct: 569 KNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASP 628
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
AL +G+ LH I + + + + T L+ MY KCG+I DA VF +L ++ SWT+MI
Sbjct: 629 EALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMI 688
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG----RMVHSLGIR 375
GY Q G +AL+LF + P+ +T LSA A G + G + + I
Sbjct: 689 AGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIE 748
Query: 376 LGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSII 419
+E Y +VD++ + ++ +A +I + E D W +++
Sbjct: 749 PRMEHY---GCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALL 790
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/655 (35%), Positives = 365/655 (55%), Gaps = 30/655 (4%)
Query: 48 PSIPCLNLLGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVF 103
P C ++L LC + SLK + +G D +KL MY + G +K A VF
Sbjct: 94 PRTLC-SVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
D + + +++ + + + +K M E D++ FS V K+ LR ++
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G ++H I+K G G + V LV Y K + S+R+VFDE +++V+SW S+I GYV
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
N A++GL +F +M +E + T+ S+ CA R + G+ +H + +K
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDR 332
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
LLDMY KCG++ A+ VF E+ +VS+T+MI GY + G +A+KLF + +
Sbjct: 333 FCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR---LGLEDYTVINALVDMYAKCHVIAD 399
P+ T+ +VL+ A+ L+ G+ VH I+ +G D V NAL+DMYAKC + +
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEW-IKENDMGF-DIFVSNALMDMYAKCGSMRE 450
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNV------------------SPDAVTLVSVISACA 441
A +F KD+I+WN++I G N SPD T+ V+ ACA
Sbjct: 451 AELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACA 510
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
SL A G +H Y + G S +V +L++ YAKCG AR++FD + K+ V+W+
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLARLLFDDITSKDLVSWT 569
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
MI GYGM G G ++ALF+ M ++P+E+ F ++L ACSH+G+V EGW+ F M +
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
K P+++HY C+VD+LAR G L +A F+ENMPI PD +++GA L GC ++ L E
Sbjct: 630 CKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAER 689
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +K+ EL P+ YYVL++N+YA +W V ++R+ + QRGL K+PGCS +++
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEI 744
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 244/720 (33%), Positives = 390/720 (54%), Gaps = 46/720 (6%)
Query: 1 MKLISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNL----- 55
+ L S RH+ P L+ R +T++ P + Q F++ S P L
Sbjct: 65 LTLASARWRHI---LAPTLKSR---HTSKFLPPRRRPIQLFSAARSSPQFSSYGLGNQNE 118
Query: 56 -------LGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP 107
T K HALL+V G +T+LV++Y + G V +R FD +P
Sbjct: 119 EIDFNFLFDSSTKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIP 178
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
D Y++ MI Y N + + + FY+ + D + F VLKAC L D G
Sbjct: 179 QKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GR 235
Query: 167 KVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++HC K+G + FV L+ MY++ G +R +FD+ +++ SW +MI+G +QN
Sbjct: 236 RIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNG 295
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A + L + + MR ++ N +T+ S++ C +L + +H Y++K G+E + +
Sbjct: 296 NAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSN 355
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL++MY K GN+ DAR F ++ D+VSW ++I Y Q+ P A F + F P
Sbjct: 356 ALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQP 415
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYI 403
+ +T+ S+ S AQ + R VH +R G +ED + NA+VDMYAK ++ A +
Sbjct: 416 DLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKV 475
Query: 404 FETTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGA 445
FE KDVI+WN++I+G N + P+ T VS++ A A +GA
Sbjct: 476 FEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGA 535
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+Q G +H K L +V+V T L++ Y KCG A +F + ++++VTW+A+I
Sbjct: 536 LQQGMRIHGRVIKTN-LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIIS 594
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
+G+ G +L LF +ML+E V+P+ V F ++LSACSH+G V EG CF M +++
Sbjct: 595 CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIK 653
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
PS+KHY CMVDLL RAG LE A F+++MP++PD S++GA L C ++ +LG+ +
Sbjct: 654 PSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDR 713
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
+ E+ YYVL+SN+YA+ G+W V++VR L ++RGL K+PG S ++++ D ++
Sbjct: 714 LFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYT 773
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/648 (34%), Positives = 354/648 (54%), Gaps = 22/648 (3%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ LN ++ + + L++ G D T L++M+ G + A VFD++P
Sbjct: 215 VSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPT 274
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D ++ MI + +K ++ M + + D F +L+AC +++G KV
Sbjct: 275 RDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKV 334
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H + +VG + +V T ++ MY KC + + +VFD +NVVSWT+MIAG+ Q+
Sbjct: 335 HARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRI 394
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E + FN+M E +E N++T S++ AC+ AL +G+ + +I++ G + + TAL
Sbjct: 395 DEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTAL 454
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L MY KCG+++DA VF+++ ++V+W AMI Y Q D AL F PN
Sbjct: 455 LSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNS 514
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T S+L+ +L +G+ VH L ++ GLE D V NALV M+ C + A+ +F
Sbjct: 515 STFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFND 574
Query: 407 TSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
++D+++WN+II+G + + PD +T +++ACAS A+ G
Sbjct: 575 MPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG 634
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
LHA T + +V VGT L++ Y KCG + A VF + +KN +W++MI GY
Sbjct: 635 RRLHALIT-EAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQ 693
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L LF M E V+P+ + F LSAC+H G++ EG F SM ++F P M+
Sbjct: 694 HGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRME 752
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVDL RAG L EA+EF+ M +EPD ++GA L C ++ +L E +K LEL
Sbjct: 753 HYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLEL 812
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P+ +V++SN+YA+ G W V ++R++M RG+ K PG S +++D
Sbjct: 813 DPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVD 860
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 206/404 (50%), Gaps = 21/404 (5%)
Query: 34 QH-ELDQTFASFHSL------PS-IPCLNLLGLCKSTGSLKAFHAL---LIVDGL-TNDK 81
QH +D+ F F+ + P+ + +++LG C S +LK + +I G ++D+
Sbjct: 390 QHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR 449
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
T L+SMY G +K A VF+ + + ++ MI Y ++ Y + + ++ + K
Sbjct: 450 VRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEG 509
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
+ ++ F+ +L C ++ G VH I+K G D V LV M+ C D+ S++
Sbjct: 510 IKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAK 569
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+F++ +++VSW ++IAG+VQ+ Q F M+E ++ ++IT L+ ACA
Sbjct: 570 NLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPE 629
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
AL +G+ LH I + + + + T L+ MY KCG+I DA VF +L ++ SWT+MI
Sbjct: 630 ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIT 689
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG----RMVHSLGIRL 376
GY Q G +AL+LF + P+ +T LSA A G + G + + I
Sbjct: 690 GYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEP 749
Query: 377 GLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSII 419
+E Y +VD++ + ++ +A +I + E D W +++
Sbjct: 750 RMEHY---GCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALL 790
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 219/634 (34%), Positives = 369/634 (58%), Gaps = 25/634 (3%)
Query: 65 LKAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
L HA I++G D TKL F ++AR++F S+P PD + F V++R + L
Sbjct: 28 LAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSL 87
Query: 124 NDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
ND + Y +R+ DNF ++ + AC + + M +H + G G + F
Sbjct: 88 NDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHL---MLLHAHSIIDGYGSNVF 144
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + LVD+Y K + +R+VFD +++ V W +MI G V+N C + + LF M
Sbjct: 145 VGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADG 204
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V + T+ +++ A A+L+ L G + LKIG +++T L+ +Y KCG++ AR
Sbjct: 205 VRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTAR 264
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+F + DL+++ AMI G+T +G + ++KLF + ++ + TI ++ + G
Sbjct: 265 LLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFG 324
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L++ +H ++ G+ + TV A +Y K + I AR++F+ + EK V+AWN++IS
Sbjct: 325 HLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMIS 384
Query: 421 GLDDNVS-----------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G N S P+AVT+ +++SACA LG++ G +H + K L
Sbjct: 385 GYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVH-HLIKSENLE 443
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
N+YV TAL++ YAKCG+ A +FD+M EKNTVTW+ MI GYG+ G G +L L+++M
Sbjct: 444 PNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEM 503
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
L+ P+ V F ++L ACSH G+VGEG + F++M ++ P ++HY CMVD+L R+G+
Sbjct: 504 LHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQ 563
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
LE+ALEF++ MP+EP +++G L C ++ D+ + +++ EL P YYVL+SN+
Sbjct: 564 LEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNI 623
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
Y+ + + + +R+++K+R L+KSPGC+L++++
Sbjct: 624 YSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVN 657
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 231/651 (35%), Positives = 360/651 (55%), Gaps = 25/651 (3%)
Query: 49 SIPCLNLL-GLCKSTGS--LKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
S+ LNL G+CK + ++ H + ++ N L+ +Y G V AR VFD
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSN-GLIDLYSKCGDVDVARRVFDQ 288
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M + D S+ M+ Y N + +++E + M+ + A E D+++G
Sbjct: 289 MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKG 348
Query: 166 MKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H C + + D V T L+ MYAKC + ++Q+F +++V+W+++IA VQ
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQT 408
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+E L LF M+ ++ N++TL S++ ACA L L GK +H + +K ++ +
Sbjct: 409 GYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTG 468
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
TAL+ MY KCG A + F+ + S D+V+W ++I GY Q G P A+ +F + +
Sbjct: 469 TALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P+ T+ V+ A A L +L+ G +H L ++LG E D V NAL+DMYAKC + A ++
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 404 FETTS-EKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGA 445
F T KD + WN II+ +N P++VT VSV+ A A L A
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+ G + HA + G LS N VG +L++ YAKCG + +F+ M K+TV+W+AM+
Sbjct: 649 FREGMAFHACIIQMGFLS-NTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLS 707
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GY + G G ++ALFS M +VQ + V F ++LSAC H G+V EG K F+SM +
Sbjct: 708 GYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIK 767
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P ++HY CMVDLL RAG +E L F++ MP+EPD ++GA L C ++S LGEV +
Sbjct: 768 PDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDH 827
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+++L P ++V++S++YA GRW + R M GL K+PGCS V+L
Sbjct: 828 LVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 878
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 306/592 (51%), Gaps = 37/592 (6%)
Query: 34 QHELDQTFAS-------FHSLPSIPCLN------LLGLCKSTGSLKAFHALLIVDGLTND 80
+H+L ++F S F SL S N LL CK L HA +IV G +
Sbjct: 4 KHQLRRSFTSIATAASEFPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHH 63
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
T L+++Y F ARSVFDS PNP + MIR Y + Y + +E Y CM ++
Sbjct: 64 HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEK 123
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
E D + F+ VLKAC ++ EG+ H EI + G D F+ GLVDMY+K D+ +
Sbjct: 124 GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRA 183
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R+VFD+ ++VV+W +MIAG Q++ E + F M+ VE + ++L +L KL
Sbjct: 184 REVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL 243
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ + +HGY+ + + +S + L+D+Y KCG++ AR VFD++ D VSW M+
Sbjct: 244 SNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMM 301
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY +G + L+LF K + N V+ S A+A+ +L G+ +H ++ ++
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRID 361
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------------- 422
D V L+ MYAKC A+ +F +D++AW++II+ L
Sbjct: 362 SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+ + P+ VTL+S++ ACA L +++G S+H ++ K + S++ GTAL++ YAKCG
Sbjct: 422 QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD-MDSDLSTGTALVSMYAKCGF 480
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+A F+ M ++ VTW+++I GY GD ++ +F + + P+ ++ A
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
C+ + +G C + + F ++D+ A+ G L A EF+ N
Sbjct: 541 CALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSA-EFLFN 590
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
T L+N Y+ AR VFD+ + + W++MI Y +L ++ M+ + ++
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 530 PNEVIFTTILSACSHTGMVGEG-WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
P++ FT +L AC+ + EG W F+ + +VD+ ++ G L+ A
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVW--FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAR 184
Query: 589 EFMENMPIEPDVSLFGAFLHG 609
E + MP + DV + A + G
Sbjct: 185 EVFDKMP-KRDVVAWNAMIAG 204
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/648 (35%), Positives = 362/648 (55%), Gaps = 25/648 (3%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
++L C + S+ H+ + G+ +D TKL S+Y ++ AR VFD P+P+
Sbjct: 8 VDLFQACNNGRSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNV 67
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH-DNFVFSKVLKACCELRDIDEGMKVHC 170
+ + +R Y +++ + + M E DNF LKAC LR ++ G +H
Sbjct: 68 HLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHG 127
Query: 171 EIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
K G D FV + LV++Y+KC +G + +VF+E + V WTSM+ GY QN+ +
Sbjct: 128 FAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPE 187
Query: 229 EGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E L LF++M V + +TL S+V+ACA+L + G +HG +++ + + LV +L
Sbjct: 188 EALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSL 247
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L++Y K G + A ++F ++ D++SW+ MI Y + ++AL LF + F PN
Sbjct: 248 LNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNS 307
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
VT+ S L A A NL G+ +H + + G E D++V AL+DMY KC +A +F+
Sbjct: 308 VTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQR 367
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
+KDV++W +++SG L D + PDAV +V +++A + LG Q
Sbjct: 368 LPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQA 427
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
LH Y + G +SNV+VG +L+ Y+KCG A +F M ++ V WS+MI YG+
Sbjct: 428 LCLHGYVVRSGF-NSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGI 486
Query: 510 QGDGGGSLALFSDML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G GG +L +F M+ N V+PN V F +ILSACSH G+V EG K F M D++ P
Sbjct: 487 HGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDS 546
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+H+ MVDLL R G+L +A++ + MPI ++GA L C ++ ++GE K +
Sbjct: 547 EHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFW 606
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L P A YY+L+SN+YA DG+W V ++R +K+RGL K G S+V++
Sbjct: 607 LDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEV 654
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/430 (36%), Positives = 240/430 (55%), Gaps = 19/430 (4%)
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
K H I G++ +S ++T MYV I A VF+++ + W MI G+
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVI 384
G +L+L++ P+ L + A L +L G+++H + G D V
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
ALVDMYAKC I AR +F+ + +D+++W S+ISG N V
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+ V+++SV+ AC +LGA++ G H+Y + G ++ V TA+++ Y+KCG AR
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGF-EFDILVATAIMDMYSKCGSLDLARC 975
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+FD K+ V WSAMI YG+ G G ++ LF M+ V+P+ V FT +LSACSH+G+
Sbjct: 976 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
+ EG F M +F + +Y CMVDLL RAG+L EA++ +ENMP+EPD S++G+ L
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C +++ DL E + + L P A Y+VL+SN+YA+ RW V +VR++M +RG +K
Sbjct: 1096 GACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANK 1155
Query: 668 SPGCSLVDLD 677
G SLV+ D
Sbjct: 1156 IQGFSLVEYD 1165
Score = 222 bits (565), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 134/364 (36%), Positives = 196/364 (53%), Gaps = 13/364 (3%)
Query: 65 LKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
LK HA + GL D + TK MY SF + A VF+ +PNP + + VMIR +
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+ + +E Y M ++ + D F F LK+C L D+ G +H +V G D FV
Sbjct: 796 DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
LVDMYAKC DI ++R VFD+ +++VSWTSMI+GY N E L F+ MR V
Sbjct: 856 DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N++++ S++ AC L AL +G+W H Y+++ G E + + TA++DMY KCG++ AR
Sbjct: 916 IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+FDE DLV W+AMI Y G+ KA+ LF A P+HVT VLSA + G
Sbjct: 976 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035
Query: 363 LNMGRMVHSLGIRLGLEDYTVINAL------VDMYAKCHVIADARYIFETTS-EKDVIAW 415
L G+M +L E++ + L VD+ + +++A + E E D W
Sbjct: 1036 LEEGKMY----FQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIW 1091
Query: 416 NSII 419
S++
Sbjct: 1092 GSLL 1095
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 231/651 (35%), Positives = 360/651 (55%), Gaps = 25/651 (3%)
Query: 49 SIPCLNLL-GLCKSTGS--LKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
S+ LNL G+CK + ++ H + ++ N L+ +Y G V AR VFD
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSAVSNG-LIDLYSKCGDVDVARRVFDQ 288
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M + D S+ M+ Y N + +++E + M+ + A E D+++G
Sbjct: 289 MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKG 348
Query: 166 MKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H C + + D V T L+ MYAKC + ++Q+F +++V+W+++IA VQ
Sbjct: 349 KEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQT 408
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+E L LF M+ ++ N++TL S++ ACA L L GK +H + +K ++ +
Sbjct: 409 GYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTG 468
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
TAL+ MY KCG A + F+ + S D+V+W ++I GY Q G P A+ +F + +
Sbjct: 469 TALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P+ T+ V+ A A L +L+ G +H L ++LG E D V NAL+DMYAKC + A ++
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588
Query: 404 FETTS-EKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGA 445
F T KD + WN II+ +N P++VT VSV+ A A L A
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+ G + HA + G LS N VG +L++ YAKCG + +F+ M K+TV+W+AM+
Sbjct: 649 FREGMAFHACIIQMGFLS-NTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLS 707
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GY + G G ++ALFS M +VQ + V F ++LSAC H G+V EG K F+SM +
Sbjct: 708 GYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIK 767
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P ++HY CMVDLL RAG +E L F++ MP+EPD ++GA L C ++S LGEV +
Sbjct: 768 PDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDH 827
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+++L P ++V++S++YA GRW + R M GL K+PGCS V+L
Sbjct: 828 LVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 878
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 306/592 (51%), Gaps = 37/592 (6%)
Query: 34 QHELDQTFAS-------FHSLPSIPCLN------LLGLCKSTGSLKAFHALLIVDGLTND 80
+H+L ++F S F SL S N LL CK L HA +IV G +
Sbjct: 4 KHQLRRSFTSIATXASEFPSLSSSTYTNYLHYPRLLSSCKHLNPLLQIHAQIIVSGFKHH 63
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
T L+++Y F ARSVFDS PNP + MIR Y + Y + +E Y CM ++
Sbjct: 64 HSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEK 123
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
E D + F+ VLKAC ++ EG+ H EI + G D F+ GLVDMY+K D+ +
Sbjct: 124 GLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRA 183
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R+VFD+ ++VV+W +MIAG Q++ E + F M+ VE + ++L +L KL
Sbjct: 184 REVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKL 243
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ + +HGY+ + + +S + L+D+Y KCG++ AR VFD++ D VSW M+
Sbjct: 244 SNIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMM 301
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY +G + L+LF K + N V+ S A+A+ +L G+ +H ++ ++
Sbjct: 302 AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRID 361
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------------- 422
D V L+ MYAKC A+ +F +D++AW++II+ L
Sbjct: 362 SDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEM 421
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+ + P+ VTL+S++ ACA L +++G S+H ++ K + S++ GTAL++ YAKCG
Sbjct: 422 QNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKAD-MDSDLSTGTALVSMYAKCGF 480
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+A F+ M ++ VTW+++I GY GD ++ +F + + P+ ++ A
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
C+ + +G C + + F ++D+ A+ G L A EF+ N
Sbjct: 541 CALLNDLDQG-TCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSA-EFLFN 590
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
T L+N Y+ AR VFD+ + + W++MI Y +L ++ M+ + ++
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 530 PNEVIFTTILSACSHTGMVGEG-WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
P++ FT +L AC+ + EG W F+ + +VD+ ++ G L+ A
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVW--FHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAR 184
Query: 589 EFMENMPIEPDVSLFGAFLHG 609
E + MP + DV + A + G
Sbjct: 185 EVFDKMP-KRDVVAWNAMIAG 204
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/647 (34%), Positives = 361/647 (55%), Gaps = 24/647 (3%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
++ L CKS G+L + H + GL D K +++MY G ++ AR VFD M
Sbjct: 130 MSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEK 189
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
S+ + I Y + E ++ M + + + VL A + G V
Sbjct: 190 KSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAV 249
Query: 169 HCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H I+ G D+ V T LV MYAKC RQVF++ +++++++W +MI G +
Sbjct: 250 HSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYW 309
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+E ++N+M+ V N+IT L+ AC ALH GK +H + K G + + AL
Sbjct: 310 EEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNAL 369
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MY +CG+I+DAR VFD++ D++SWTAMI G +SG+ +AL ++ + + A PN
Sbjct: 370 ISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNR 429
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
VT S+L+A + L GR +H + GL D V N LV+MY+ C + DAR +F+
Sbjct: 430 VTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDR 489
Query: 407 TSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
++D++A+N++I G ++ + PD VT +++++ACA+ G+++
Sbjct: 490 MIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWA 549
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H K G S + VG AL++ YAKCG A +VF+ M ++N ++W+A+IGG
Sbjct: 550 REIHTLVRKGGFFS-DTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQ 608
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L LF M E V+P+ V F ++LSACSH G++ EG + F SM +DF +P+++
Sbjct: 609 HGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIE 668
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVDLL RAG+L+EA ++ MP + + ++GA L C ++ + E + L+L
Sbjct: 669 HYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKL 728
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
D A YV +S++YA+ G W ++R+LM+QRG++K PG S + +
Sbjct: 729 DLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQV 775
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/574 (29%), Positives = 303/574 (52%), Gaps = 38/574 (6%)
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLV 187
D+V++ + ++ D + K+LK C E++D+ G +VH I++ PD + + L+
Sbjct: 9 DVVQYLQQQGAQVNSSD---YMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALI 65
Query: 188 DMYAKCRDIGSSRQVFDET--LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
+MY +C I +RQV+ + +++ V SW +M+ GY+Q ++ L L +M++ + +
Sbjct: 66 NMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPD 125
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T+ S +++C AL G+ +H ++ G+ + + +L+MY KCG+I +AR VFD
Sbjct: 126 RTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFD 185
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
++ +VSWT I GY G + A ++F + PN +T SVL+A + L
Sbjct: 186 KMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKW 245
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
G+ VHS + G E D V ALV MYAKC D R +FE +D+IAWN++I GL
Sbjct: 246 GKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAE 305
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+ V P+ +T V +++AC + A+ G +H+ K G +S++
Sbjct: 306 GGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAG-FTSDIG 364
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V AL++ Y++CG + AR+VFD M K+ ++W+AMIGG G G +L ++ +M
Sbjct: 365 VQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAG 424
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
V+PN V +T+IL+ACS + G + + + +V++ + G +++A
Sbjct: 425 VEPNRVTYTSILNACSSPAALEWGRR-IHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDA 483
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK---KMLE--LHPDKACYYVLVSN 642
+ + M I+ D+ + A + G Y+ +LG+ +K ++ E L PDK Y ++ N
Sbjct: 484 RQVFDRM-IQRDIVAYNAMIGG---YAAHNLGKEALKLFDRLQEEGLKPDKVTYINML-N 538
Query: 643 LYASDGRWIRVNQVRELMKQRGL--SKSPGCSLV 674
A+ G ++ L+++ G S G +LV
Sbjct: 539 ACANSGSLEWAREIHTLVRKGGFFSDTSVGNALV 572
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 232/690 (33%), Positives = 373/690 (54%), Gaps = 60/690 (8%)
Query: 40 TFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKY 98
TFAS L + G +S K H+ LI G D L+ MY +
Sbjct: 278 TFAS--------ALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEES 329
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
VFD M + ++ +I + D + + M++ + + F +L A
Sbjct: 330 CLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAG 389
Query: 159 LRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
L DI +G ++H +V+ + D + + LVDMY+KC + + QVF L++N VS+ ++
Sbjct: 390 LADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNAL 449
Query: 218 IAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
+AGYVQ A+E L L++ M+ E ++ +Q T +L+T CA R +QG+ +H ++++
Sbjct: 450 LAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRAN 509
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
I N + T L+ MY +CG + A+ +F+ + + SW +MI GY Q+G +AL+LF
Sbjct: 510 ITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFK 569
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA-LVDMYAKCH 395
+ P+ +++S+LS+ L + GR +H+ +R +E+ ++ LVDMYAKC
Sbjct: 570 QMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCG 629
Query: 396 VIADARYIFETTSEKDVIA-------------------------------WNSIISG--- 421
+ A +++ T +KDVI WNSI++G
Sbjct: 630 SMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYAN 689
Query: 422 --------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
L+ ++ D +T+V++++ C+SL A++ G LH+ K+G ++ +V
Sbjct: 690 KGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVV 749
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
+ TAL++ Y+KCG AR VFD M KN V+W+AMI GY G +L L+ +M +
Sbjct: 750 LETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKG 809
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ PNEV F ILSACSHTG+V EG + F SM D+ +HY CMVDLL RAGRLE+A
Sbjct: 810 MYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDA 869
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
EF+E MPIEP+VS +GA L C ++ D+G + +++ EL P YV++SN+YA+
Sbjct: 870 KEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAA 929
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
GRW V +R++MK +G+ K PG S ++++
Sbjct: 930 GRWKEVEDIRQMMKMKGVKKDPGVSWIEIN 959
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 185/664 (27%), Positives = 317/664 (47%), Gaps = 74/664 (11%)
Query: 40 TFASFHSLPSI--PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNT----KLVSMYGSF 93
F+ + PS+ C+ + + G ++ + ++ GL CN LV Y F
Sbjct: 171 NFSDKFTFPSVIKACIAM----EDMGGVRQLQSSVVKAGLN---CNLFVGGALVDGYARF 223
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + A + D + ++ +I Y +++ + M K DNF F+ L
Sbjct: 224 GWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASAL 283
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
+ C LR D G +VH +++ G D+FV L+DMYAKC D S +VFDE ++N V
Sbjct: 284 RVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQV 343
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+W S+I+ Q + LVLF RM+E + N+ LGS++ A A L + +G+ LHG++
Sbjct: 344 TWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHL 403
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
++ + + L +AL+DMY KCG + +A VF L + VS+ A++ GY Q G ++AL
Sbjct: 404 VRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEAL 463
Query: 333 KLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA-LVDM 390
+L+ D + D P+ T ++L+ A N N GR +H+ IR + ++ LV M
Sbjct: 464 ELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHM 523
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTL 433
Y++C + A+ IF +E++ +WNS+I G N + PD +L
Sbjct: 524 YSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSL 583
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD------------ 481
S++S+C SL Q G LH + + + + + L++ YAKCG
Sbjct: 584 SSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI-LQVVLVDMYAKCGSMDYAWKVYDQTI 642
Query: 482 -------------------AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
A A+ +FD M ++NT W++++ GY +G S F +
Sbjct: 643 KKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLE 702
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARA 581
ML +++ + + TI++ CS + G + +S+ FV S+ +VD+ ++
Sbjct: 703 MLESDIEYDVLTMVTIVNLCSSLPALEHGDQ-LHSLIIKKGFVNCSVVLETALVDMYSKC 761
Query: 582 GRLEEALEFMENMPIEPDVS----LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYY 637
G + +A +NM + VS + G HGC + L E M KK ++P++ +
Sbjct: 762 GAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALI-LYEEMPKK--GMYPNEVTFL 818
Query: 638 VLVS 641
++S
Sbjct: 819 AILS 822
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 165/593 (27%), Positives = 296/593 (49%), Gaps = 35/593 (5%)
Query: 42 ASFHSLPS-----IPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGS 92
S H+ P+ +P +L+ C + S K+ H +I +G D TK++ +Y
Sbjct: 59 TSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYAR 118
Query: 93 FGHVK---YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
G + YAR +F+ MP + ++ MI Y D Y +++ Y MR D F F
Sbjct: 119 SGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTF 178
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
V+KAC + D+ ++ +VK G + FV LVD YA+ + + DE
Sbjct: 179 PSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEG 238
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+VV+W ++IAGYV+ +E +F+RM + V + T S + C LR+ GK +
Sbjct: 239 TSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQV 298
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H ++ G + ++ + AL+DMY KC + VFDE+ + V+W ++I Q G+
Sbjct: 299 HSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHF 358
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINAL 387
+ AL LF + + + N + S+L ASA L ++ GR +H +R L D + +AL
Sbjct: 359 NDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSAL 418
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------------DDNVSPD 429
VDMY+KC ++ +A +F + E++ +++N++++G +D + PD
Sbjct: 419 VDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPD 478
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T ++++ CA+ G +HA+ + ++ N+ V T L++ Y++CG A+ +F
Sbjct: 479 QFTFTTLLTLCANQRNDNQGRQIHAHLIRAN-ITKNIIVETELVHMYSECGRLNYAKEIF 537
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+ M E+N +W++MI GY G+ +L LF M ++P+ +++LS+C
Sbjct: 538 NRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQ 597
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+G + + R+ + V +VD+ A+ G ++ A + + I+ DV L
Sbjct: 598 KGRELHNFIVRNTMEEEGILQ-VVLVDMYAKCGSMDYAWKVYDQ-TIKKDVIL 648
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/643 (36%), Positives = 356/643 (55%), Gaps = 27/643 (4%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVS----MYGSFGHVKYARSVFDSMPNPDFYSFQ 115
KS + K HA I GL + + L+S Y G +AR +FD + NP +S+
Sbjct: 32 KSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELRNPSLFSWN 91
Query: 116 VMIRWYFLNDL-YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MIR Y + L Y + F + + + DN+ + V+KAC + + G +H V
Sbjct: 92 AMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMGALIHARTVM 151
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
G D+FV L+ MY C ++ +R+VFD ++ +VSW +MI GY +N C +E L++
Sbjct: 152 SGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMV 211
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
F+ M +E + T+ S++ C+ L+ L G+ +H + + + + +LLDMY K
Sbjct: 212 FDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAK 271
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CGN+ +A+ +F E+ D+VSWT M+ GY +G AL L ++ PN VT+ASV
Sbjct: 272 CGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASV 331
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDV 412
LSA A L +L GR +H IR LE ++ AL+DMYAKC+ + + +F S++
Sbjct: 332 LSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRT 391
Query: 413 IAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
WN+IISG L + V P+ TL S++ A A L +Q ++H Y
Sbjct: 392 APWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGY 451
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM--REKNTVTWSAMIGGYGMQGDG 513
+ G LS + V T L++ Y+KCG +SA +F+ + ++K+ +TWSA+I GYGM G G
Sbjct: 452 LIRSGFLS-RIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHG 510
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+++LF M+ V+PNE+ FT+IL ACSH G+V EG F M D + HY C
Sbjct: 511 ETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLRTDHYTC 570
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
++DLL RAGRLEEA E + M P+ +++GA L C ++ +LGEV K + EL P
Sbjct: 571 VIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLFELEPGN 630
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YVL++N+Y++ GRW VR +M GL K+P SL+++
Sbjct: 631 TGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLIEV 673
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSS--NVYVGTALLNFYAKCGDAQSARMVFDAM 492
S++ C S ++ +HA++ GLLSS + ++ ++L YA CG A AR +FD +
Sbjct: 23 SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDEL 82
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ-PNEVIFTTILSAC 542
R + +W+AMI Y G +L LF ML + P+ + ++ AC
Sbjct: 83 RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKAC 133
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 224/645 (34%), Positives = 369/645 (57%), Gaps = 23/645 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L LC SL K H+++I +G++ D+ KLV MY + G + R +FD + N
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ + +++ Y +++ V +K M+K + + F+ VLK L + E +VH
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
++K+G G ++ V+ L+ Y K + S+ +FDE + +VVSW SMI G V N +
Sbjct: 494 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSG 553
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
GL +F +M VE + TL S++ A A + L G+ LHG+ +K LL
Sbjct: 554 NGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLL 613
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KCGN+ A VF ++ +VSWT+ I Y + G A+ LF + + P+
Sbjct: 614 DMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIY 673
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
T+ S++ A A +L+ GR VHS I+ G+ + V NAL++MYAKC + +AR +F
Sbjct: 674 TVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKI 733
Query: 408 SEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLGAVQVGSS 451
KD+++WN++I G N PD +T+ V+ ACA L A+ G
Sbjct: 734 PVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGRE 793
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+H + ++G S +++V AL++ YAKCG A+++FD + +K+ ++W+ MI GYGM G
Sbjct: 794 IHGHILRRGYFS-DLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHG 852
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G +++ F++M ++P+E F+ IL+ACSH+G++ EGWK F SM + P ++HY
Sbjct: 853 FGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHY 912
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C+VDLLAR G L +A +F+E+MPI+PD +++G L GC ++ L E + + + EL P
Sbjct: 913 ACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEP 972
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
D YYV+++N+YA +W V ++R+ M++RG ++PGCS +++
Sbjct: 973 DNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEV 1017
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/517 (30%), Positives = 265/517 (51%), Gaps = 31/517 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ VL+ C E + +++G +VH I+ G D + LV MY C D+ R++FD+ +
Sbjct: 372 YCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIM 431
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+ V W +++ Y + +E + LF +M++ V GN T ++ A L + + K
Sbjct: 432 NDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKR 491
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HGY+LK+G N+ +V +L+ Y K G + A ++FDEL D+VSW +MI G +G+
Sbjct: 492 VHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGF 551
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NA 386
L++F + T+ SVL A A +GNL++GR +H G++ + V N
Sbjct: 552 SGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNT 611
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS------------GLDDN-----VSPD 429
L+DMY+KC + A +F + +++W S I+ GL D V PD
Sbjct: 612 LLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPD 671
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T+ S++ ACA ++ G +H+Y K G + SN+ V AL+N YAKCG + AR+VF
Sbjct: 672 IYTVTSIVHACACSSSLDKGRDVHSYVIKNG-MGSNLPVTNALINMYAKCGSVEEARLVF 730
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+ K+ V+W+ MIGGY +L LF DM ++ +P+++ +L AC+ +
Sbjct: 731 SKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALD 789
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVC-MVDLLARAGRLEEALEFMENMP----IEPDVSLFG 604
+G + + R F S H C +VD+ A+ G L A + +P I V + G
Sbjct: 790 KGREIHGHILRRGYF--SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 847
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
+HG G + E+ I + PD++ + V+++
Sbjct: 848 YGMHGFGNEAISTFNEMRIAG---IEPDESSFSVILN 881
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 235/655 (35%), Positives = 364/655 (55%), Gaps = 30/655 (4%)
Query: 48 PSIPCLNLLGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVF 103
P C ++L LC + SLK + +G D +KL MY + G +K A VF
Sbjct: 94 PRTLC-SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
D + + +++ + + + +K M E D++ FS V K+ LR +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G ++H I+K G G + V LV Y K + + S+R+VFDE +++V+SW S+I GYV
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
N A++GL +F +M +E + T+ S+ CA R + G+ +H +K
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
LLDMY KCG++ A++VF E+ +VS+T+MI GY + G +A+KLF + +
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR---LGLEDYTVINALVDMYAKCHVIAD 399
P+ T+ +VL+ A+ L+ G+ VH I+ LG D V NAL+DMYAKC + +
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDLGF-DIFVSNALMDMYAKCGSMQE 450
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNV------------------SPDAVTLVSVISACA 441
A +F KD+I+WN+II G N SPD T+ V+ ACA
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
SL A G +H Y + G S +V +L++ YAKCG A M+FD + K+ V+W+
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT 569
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
MI GYGM G G ++ALF+ M ++ +E+ F ++L ACSH+G+V EGW+ F M +
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
K P+++HY C+VD+LAR G L +A F+ENMPI PD +++GA L GC ++ L E
Sbjct: 630 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +K+ EL P+ YYVL++N+YA +W +V ++R+ + QRGL K+PGCS +++
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/648 (36%), Positives = 363/648 (56%), Gaps = 28/648 (4%)
Query: 57 GLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQV 116
G +S S K HA LI GL + + LV+ Y G+V AR +FD + +
Sbjct: 32 GAAQSLTSTKQLHAHLITSGLLSIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNF 91
Query: 117 MIRWYFLN-DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH-CEIVK 174
MI+ Y D ++ + F + + + DN+ + V+KAC EL ++ G +H +V
Sbjct: 92 MIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVS 151
Query: 175 VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
G FVL L+ MY C ++ +R+VFD +K+VVSW +MI GY +N A LV+F
Sbjct: 152 KFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVF 211
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK--IGIEINSHLVTALLDMYV 292
N+M + VE + ++ S++ AC L+ L G+ +HG + + +G +I S+ AL+DMY
Sbjct: 212 NQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKIVSN---ALVDMYA 268
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
KCG++ +AR VFD + D+VSWT+MI GY +G AL LF + PN VTIA
Sbjct: 269 KCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIAL 328
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+L A A L NL GR +H ++ L + V +L+DMYAKC+ + + +F TS K
Sbjct: 329 ILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKK 388
Query: 412 VIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
+ WN+++SG L + V +A T S++ A L +Q +++++
Sbjct: 389 TVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINS 448
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE--KNTVTWSAMIGGYGMQGD 512
Y + G +S N+ V T+L++ Y+KCG +SA +F+ + ++ WS +I GYGM G
Sbjct: 449 YLMRSGFVS-NIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGH 507
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
G +++LF M+ V+PN+V FT++L +CSH GMV +G F M +D + +P+ HY
Sbjct: 508 GETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYT 567
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
CMVDLL RAGR++EA + ++ MP P +++GA L C ++ +LGEV + + EL P
Sbjct: 568 CMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPG 627
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIAN 680
YVL++ LYA+ GRW VR+ M GL K+P SL++ N
Sbjct: 628 NTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIEAGTVN 675
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 247/504 (49%), Gaps = 31/504 (6%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ +LK + + ++H ++ G + + LV YA C + ++R++FDE
Sbjct: 24 YQSLLKHYGAAQSLTSTKQLHAHLITSGLLSIDIRSVLVATYAHCGYVHNARKLFDELRQ 83
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--GNQITLGSLVTACAKLRALHQGK 266
+ + + MI Y+ E + +F M G + + T ++ AC++L + G+
Sbjct: 84 RGTLLYNFMIKMYIAKGDYFEAMKVFLEML-GSKDCCPDNYTYPFVIKACSELLLVEYGR 142
Query: 267 WLHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
LHG L + + SHL + +LL MY+ CG + +AR VFD + +VSW MI GY +
Sbjct: 143 VLHG--LTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFK 200
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+G+ + AL +F + + ++ SVL A L L +GR VH L L V
Sbjct: 201 NGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKIVS 260
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
NALVDMYAKC + +AR +F+ E+DV++W S+I+G N +
Sbjct: 261 NALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLR 320
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P++VT+ ++ ACASL ++ G LH + KQ L S V V T+L++ YAKC +
Sbjct: 321 PNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSE-VAVETSLIDMYAKCNCLGLSFS 379
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF K TV W+A++ G ++ LF ML E V+ N ++L A G+
Sbjct: 380 VFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPA---YGI 436
Query: 548 VG--EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE-PDVSLFG 604
+ + S FV +++ ++D+ ++ G LE A + +P++ D+ ++
Sbjct: 437 LADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWS 496
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLE 628
+ G G++ + + K+M++
Sbjct: 497 IIIAGYGMHGHGETAVSLFKQMVQ 520
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 157/322 (48%), Gaps = 9/322 (2%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLTNDKC------NTKLVSMYGSFGHVKYARSVFDSMP 107
+++ + + G LK V GL +K + LV MY G + AR VFD+M
Sbjct: 225 SVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMV 284
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
D S+ MI Y LN K + +K M+ ++ + +L AC L ++ +G
Sbjct: 285 ERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNNLKDGRC 344
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H ++K + V T L+DMYAKC +G S VF T K V W ++++G V N
Sbjct: 345 LHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSGCVHNKL 404
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
A E + LF +M VE N T SL+ A L L ++ Y+++ G N + T+
Sbjct: 405 ATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATS 464
Query: 287 LLDMYVKCGNIRDARSVFDELC--SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
L+D+Y KCG++ A +F+ + D+ W+ +I GY G+ + A+ LF +
Sbjct: 465 LIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVK 524
Query: 345 PNHVTIASVLSASAQLGNLNMG 366
PN VT SVL + + G ++ G
Sbjct: 525 PNDVTFTSVLQSCSHAGMVDDG 546
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/659 (34%), Positives = 368/659 (55%), Gaps = 34/659 (5%)
Query: 46 SLPSIPCLNLLGLCKSTGSLK--------AFHALLIVDGLTNDKCNTKLVSMYGSFGHVK 97
+L + LL CKS +L+ A A L+ D + C +++MY G +
Sbjct: 241 ALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFD-VNVANC---ILNMYAKCGSIH 296
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
AR VFD M S+ ++I Y + E ++ M++ + + VL A
Sbjct: 297 EAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFS 356
Query: 158 ELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
+ G VH I+ G D V T LV MYAKC RQVF++ +++++++W +
Sbjct: 357 GPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNT 416
Query: 217 MIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
MI G + +E ++++M REG + N+IT L+ AC ALH G+ +H ++K
Sbjct: 417 MIGGLAEGGNWEEASEIYHQMQREGMMP-NKITYVILLNACVNPTALHWGREIHSRVVKD 475
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G + + AL+ MY +CG+I+DAR +F+++ D++SWTAMI G +SG +AL +F
Sbjct: 476 GFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVF 535
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
D + A PN VT S+L+A + L+ GR +H I GL D V N LV+MY+ C
Sbjct: 536 QDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMC 595
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVI 437
+ DAR +F+ +++D++A+N++I G ++ + PD VT ++++
Sbjct: 596 GSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINML 655
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
+ACA+ G+++ +H+ K G LS + +G AL++ YAKCG A +VFD M ++N
Sbjct: 656 NACANSGSLEWAKEIHSLVLKDGYLS-DTSLGNALVSTYAKCGSFSDALLVFDKMMKRNV 714
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
++W+A+IGG G G L LF M E ++P+ V F ++LSACSH G++ EG + F S
Sbjct: 715 ISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCS 774
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
M RDF P+++HY CMVDLL RAG+L+E ++ MP + + ++GA L C ++
Sbjct: 775 MSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVP 834
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ E + L+L PD A YV +S++YA+ G W ++R+LM+QRG++K PG S +++
Sbjct: 835 VAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIEV 893
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/566 (29%), Positives = 296/566 (52%), Gaps = 36/566 (6%)
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVL 183
D D+V++ + R+ D + K+LK C E++D+ G +VH I++ D + +
Sbjct: 123 DRAMDVVQYLQQQGARVNSCD---YMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTV 179
Query: 184 TGLVDMYAKCRDIGSSRQVFDET--LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
L++MY +C I +RQV+++ ++ V SW +M+ GYVQ +E L L M++
Sbjct: 180 NALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHG 239
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T L+++C AL G+ +H +K + + ++ +L+MY KCG+I +AR
Sbjct: 240 LALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAR 299
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD++ + +VSWT +I GY G+ + A ++F + PN +T +VL+A +
Sbjct: 300 EVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L G+ VHS + G E D V ALV MYAKC D R +FE +D+IAWN++I
Sbjct: 360 ALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIG 419
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
GL + + P+ +T V +++AC + A+ G +H+ K G +
Sbjct: 420 GLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFM- 478
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
++ V AL++ YA+CG + AR++F+ M K+ ++W+AMIGG G G +LA+F DM
Sbjct: 479 FDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDM 538
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
++PN V +T+IL+ACS + G + + + +V++ + G
Sbjct: 539 QQAGLKPNRVTYTSILNACSSPAALDWGRR-IHQQVIEAGLATDAHVANTLVNMYSMCGS 597
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK---KMLE--LHPDKACYYV 638
+++A + + M + D+ + A + G Y+ +LG+ +K ++ E L PDK Y
Sbjct: 598 VKDARQVFDRM-TQRDIVAYNAMIGG---YAAHNLGKEALKLFDRLQEEGLKPDKVTYIN 653
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRG 664
++ N A+ G ++ L+ + G
Sbjct: 654 ML-NACANSGSLEWAKEIHSLVLKDG 678
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 255/735 (34%), Positives = 382/735 (51%), Gaps = 93/735 (12%)
Query: 13 RTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALL 72
+ K P L L F ++ + T D T FH CKS S + H L
Sbjct: 9 KPKPPLLFLTTFFFSTASSTT----DLTSTLFHQ------------CKSLASAELIHQQL 52
Query: 73 IVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD----FYSFQVMIRWYFLNDLYK 128
+V GL +D T ++SMY +F A SV + +P F+ Q++ R L L +
Sbjct: 53 LVQGLPHDP--THIISMYLTFNSPAKALSVLRRL-HPSSHTVFWWNQLIRRSVHLGFL-E 108
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLV 187
D+++ Y+ M++ D++ F VLKAC E+ G VH + G + FV GLV
Sbjct: 109 DVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLV 168
Query: 188 DMYAKCRDIGSSRQVFDETLDKNV---VSWTSMIAGYVQNDCAQEGLVLFNRMREGF-VE 243
MY +C ++RQVFDE ++ V VSW S++A Y+Q + + +F RM E +
Sbjct: 169 SMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIR 228
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ ++L +++ ACA + A +GK +HGY L+ G+ + + A++DMY KCG + +A V
Sbjct: 229 PDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKV 288
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK----------WA------------ 341
F+ + D+VSW AM+ GY+Q G D AL LF + W+
Sbjct: 289 FERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLG 348
Query: 342 ----DFF---------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--------ED 380
D F PN VT+ S+LS A G L G+ H I+ L +D
Sbjct: 349 FEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDD 408
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKD--VIAWNSIISG----------------- 421
VINAL+DMY+KC AR +F+ KD V+ W +I G
Sbjct: 409 LMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 468
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
D+ V P+A T+ + ACA LGA++ G +HAY + S+ ++V L++ Y+K
Sbjct: 469 LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKS 528
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
GD +AR+VFD M ++N V+W++++ GYGM G G +L +F +M + P+ V F +L
Sbjct: 529 GDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVL 588
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
ACSH+GMV +G F M +DF VP +HY CMVDLL+RAGRL+EA+E + MP++P
Sbjct: 589 YACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPT 648
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
+++ A L C +Y+ +LGE ++LEL Y L+SN+YA+ W V ++R L
Sbjct: 649 PAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYL 708
Query: 660 MKQRGLSKSPGCSLV 674
MK G+ K PGCS V
Sbjct: 709 MKNTGIKKRPGCSWV 723
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 255/735 (34%), Positives = 382/735 (51%), Gaps = 93/735 (12%)
Query: 13 RTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALL 72
+ K P L L F ++ + T D T FH CKS S + H L
Sbjct: 28 KPKPPLLFLTTFFFSTASSTT----DLTSTLFHQ------------CKSLASAELTHQQL 71
Query: 73 IVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD----FYSFQVMIRWYFLNDLYK 128
+V GL +D T ++SMY +F A SV + +P F+ Q++ R L L +
Sbjct: 72 LVQGLPHDP--THIISMYLTFNSPAKALSVLRRL-HPSSHTVFWWNQLIRRSVHLGFL-E 127
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLV 187
D+++ Y+ M++ D++ F VLKAC E+ G VH + G + FV GLV
Sbjct: 128 DVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLV 187
Query: 188 DMYAKCRDIGSSRQVFDETLDKNV---VSWTSMIAGYVQNDCAQEGLVLFNRMREGF-VE 243
MY +C ++RQVFDE ++ V VSW S++A Y+Q + + +F RM E +
Sbjct: 188 SMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIR 247
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ ++L +++ ACA + A +GK +HGY L+ G+ + + A++DMY KCG + +A V
Sbjct: 248 PDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKV 307
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK----------WA------------ 341
F+ + D+VSW AM+ GY+Q G D AL LF + W+
Sbjct: 308 FERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLG 367
Query: 342 ----DFF---------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--------ED 380
D F PN VT+ S+LS A G L G+ H I+ L +D
Sbjct: 368 FEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDD 427
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKD--VIAWNSIISG----------------- 421
VINAL+DMY+KC AR +F+ KD V+ W +I G
Sbjct: 428 LMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 487
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
D+ V P+A T+ + ACA LGA++ G +HAY + S+ ++V L++ Y+K
Sbjct: 488 LQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKS 547
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
GD +AR+VFD M ++N V+W++++ GYGM G G +L +F +M + P+ V F +L
Sbjct: 548 GDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVL 607
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
ACSH+GMV +G F M +DF VP +HY CMVDLL+RAGRL+EA+E + MP++P
Sbjct: 608 YACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPT 667
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
+++ A L C +Y+ +LGE ++LEL Y L+SN+YA+ W V ++R L
Sbjct: 668 PAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYL 727
Query: 660 MKQRGLSKSPGCSLV 674
MK G+ K PGCS V
Sbjct: 728 MKNTGIKKRPGCSWV 742
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/647 (36%), Positives = 362/647 (55%), Gaps = 32/647 (4%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
L C + + K HALL+V G + N +TKL+++Y + G + +RS FD + + +S
Sbjct: 28 LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87
Query: 114 FQVMIRWYFLNDLYKDIVE-----FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ +I Y Y + + F C L+ D + F +LKAC L D G KV
Sbjct: 88 WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRP-DFYTFPPILKACVSLVD---GKKV 143
Query: 169 HCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
HC + K+G D FV LV +Y++ + + +VF + K+V SW +MI+G+ QN A
Sbjct: 144 HCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNA 203
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
L + NRM+ V+ + IT+ S++ CA+ + G +H ++LK G++ + + AL
Sbjct: 204 AGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNAL 263
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++MY K G ++DA+ VFD++ DLVSW ++I Y Q+ P AL+ F + P+
Sbjct: 264 INMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDL 323
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFE 405
+T+ S+ S +QL + + R + IR D V+ NALV+MYAK + A +F+
Sbjct: 324 LTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFD 383
Query: 406 TTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQ 447
KD I+WN++++G N P+ T VS+I A + +GA+Q
Sbjct: 384 QLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQ 443
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +HA K L +V+V T L++ Y KCG + A +F + +V W+A+I
Sbjct: 444 QGMKIHAKLIKNSLYL-DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASL 502
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G+ G G +L LF DML E V+ + + F ++LSACSH+G+V EG KCF M +++ PS
Sbjct: 503 GIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPS 562
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+KHY CMVDLL RAG LE+A E + NMPI+PD S++GA L C +Y +LG + ++L
Sbjct: 563 LKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
E+ + YYVL+SN+YA+ +W V +VR L + RGL K+PG S V
Sbjct: 623 EVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSV 669
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/647 (36%), Positives = 362/647 (55%), Gaps = 32/647 (4%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
L C + + K HALL+V G + N +TKL+++Y + G + +RS FD + + +S
Sbjct: 28 LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87
Query: 114 FQVMIRWYFLNDLYKDIVE-----FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ +I Y Y + + F C L+ D + F +LKAC L D G KV
Sbjct: 88 WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRP-DFYTFPPILKACVSLVD---GKKV 143
Query: 169 HCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
HC + K+G D FV LV +Y++ + + +VF + K+V SW +MI+G+ QN A
Sbjct: 144 HCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNA 203
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
L + NRM+ V+ + IT+ S++ CA+ + G +H ++LK G++ + + AL
Sbjct: 204 AGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNAL 263
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++MY K G ++DA+ VFD++ DLVSW ++I Y Q+ P AL+ F + P+
Sbjct: 264 INMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDL 323
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFE 405
+T+ S+ S +QL + + R + IR D V+ NALV+MYAK + A +F+
Sbjct: 324 LTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFD 383
Query: 406 TTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQ 447
KD I+WN++++G N P+ T VS+I A + +GA+Q
Sbjct: 384 QLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQ 443
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +HA K L +V+V T L++ Y KCG + A +F + +V W+A+I
Sbjct: 444 QGMKIHAKLIKNSLYL-DVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASL 502
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G+ G G +L LF DML E V+ + + F ++LSACSH+G+V EG KCF M +++ PS
Sbjct: 503 GIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPS 562
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+KHY CMVDLL RAG LE+A E + NMPI+PD S++GA L C +Y +LG + ++L
Sbjct: 563 LKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLL 622
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
E+ + YYVL+SN+YA+ +W V +VR L + RGL K+PG S V
Sbjct: 623 EVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSV 669
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 240/653 (36%), Positives = 353/653 (54%), Gaps = 33/653 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+++L S G+L K H+ + GL D + LV MY G + AR VFD M
Sbjct: 135 VSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVE 194
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK-----RLKEHDNFVFSKVLKACCELRDID 163
D +S+ VMI + ++ + M + L + + + + + + L +
Sbjct: 195 RDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVK 254
Query: 164 EGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
E VH K G D V L+ MYAKC I +R VFD D++V+SW +MI G
Sbjct: 255 E---VHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLA 311
Query: 223 QNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
QN C E +F +M+ EGFV + T SL+ A K +H + +++G+ +
Sbjct: 312 QNGCGHEAFTIFLKMQQEGFVP-DSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDL 370
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ +A + MY++CG+I DA+ +FD+L ++ +W AMI G Q +AL LF +
Sbjct: 371 RVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRRE 430
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADAR 401
FFP+ T ++LSA+ L + VHS I GL D V NALV MYAKC A+
Sbjct: 431 GFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAK 490
Query: 402 YIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLG 444
+F+ E++V W +ISGL + + PDA T VS++SACAS G
Sbjct: 491 QVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTG 550
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
A++ +H+++ GL+S ++ VG AL++ YAKCG AR VFD M E++ +W+ MI
Sbjct: 551 ALEWVKEVHSHAVNAGLVS-DLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMI 609
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GG G G +L LF M E +PN F +LSACSH G+V EG + F S+ +D+
Sbjct: 610 GGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGI 669
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
P+M+HY CMVDLL RAG+LEEA F+ NMPIEP + +GA L C Y ++ E K
Sbjct: 670 EPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAK 729
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ L+L P A YVL+SN+YA+ G W + VR +M++RG+ K PG S +++D
Sbjct: 730 ERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIEVD 782
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 192/620 (30%), Positives = 304/620 (49%), Gaps = 31/620 (5%)
Query: 49 SIPCLNLLGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFD 104
I L++L C S SLK HA +I G +D + T LV+MY G + A+ +FD
Sbjct: 30 EITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFD 89
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
M + S+ VMI ++ + M++ +++ + +L A ++
Sbjct: 90 KMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEW 149
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+VH V G D V LV MYAK I +R VFD +++++ SWT MI G Q
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQ 209
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA--KLRALHQGKWLHGYILKIGIEINS 281
+ QE LF +M G N T S++ A A AL K +H + K G +
Sbjct: 210 HGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDL 269
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ AL+ MY KCG+I DAR VFD +C D++SW AMI G Q+G +A +F +
Sbjct: 270 RVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQE 329
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADA 400
F P+ T S+L+ G + VH + +GL D V +A V MY +C I DA
Sbjct: 330 GFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDA 389
Query: 401 RYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASL 443
+ IF+ + ++V WN++I G+ + PDA T V+++SA
Sbjct: 390 QLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGE 449
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
A++ +H+Y+ GL+ ++ VG AL++ YAKCG+ A+ VFD M E+N TW+ M
Sbjct: 450 EALEWVKEVHSYAIDAGLV--DLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVM 507
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I G G G + +LF ML E + P+ + +ILSAC+ TG + E K +S +
Sbjct: 508 ISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGAL-EWVKEVHSHAVNAG 566
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR-FDLGEVM 622
V ++ +V + A+ G +++A ++M +E DV + + G + R D ++
Sbjct: 567 LVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHGRGLDALDLF 625
Query: 623 IKKMLE-LHPDKACYYVLVS 641
+K LE P+ + ++S
Sbjct: 626 VKMKLEGFKPNGYSFVAVLS 645
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 188/566 (33%), Positives = 288/566 (50%), Gaps = 40/566 (7%)
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG 176
MI Y +D ++ Y MR+ + + + +LKACC + G K+H I++ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 177 -GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
D V T LV+MY KC I ++ +FD+ +++NV+SWT MI G QE F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 236 RM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
+M REGF+ N T S++ A A AL K +H + + G+ ++ + AL+ MY K
Sbjct: 121 QMQREGFIP-NSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKS 179
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G+I DAR VFD + D+ SWT MI G Q G +A LF + PN T S+L
Sbjct: 180 GSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSIL 239
Query: 355 SASA--QLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+ASA G L + VH + G + D V NAL+ MYAKC I DAR +F+ ++D
Sbjct: 240 NASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRD 299
Query: 412 VIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA 454
VI+WN++I GL N PD+ T +S+++ S GA + +H
Sbjct: 300 VISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHK 359
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
++ + GL+ S++ VG+A ++ Y +CG A+++FD + +N TW+AMIGG Q G
Sbjct: 360 HAVEVGLV-SDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW-KCFYSMCRDFKFVPSMKHYVC 573
+L+LF M E P+ F ILSA + G W K +S D V ++
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSA--NVGEEALEWVKEVHSYAIDAGLV-DLRVGNA 475
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLF-----GAFLHGCGLYSRFDLGEVMIKKMLE 628
+V + A+ G A + ++M +E +V+ + G HGCG + F L M+++ +
Sbjct: 476 LVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMISGLAQHGCG-HEAFSLFLQMLREGIV 533
Query: 629 LHPDKACYYVLVSNLYASDG--RWIR 652
PD A YV + + AS G W++
Sbjct: 534 --PD-ATTYVSILSACASTGALEWVK 556
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/646 (35%), Positives = 362/646 (56%), Gaps = 24/646 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDS-MPN 108
++L LC L K H+++ +G+ + KLV MY S G ++ R +FD + +
Sbjct: 456 SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSD 515
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ + +M+ Y Y++ + +K M+K +++ FS +LK L + E ++
Sbjct: 516 NKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRI 575
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H + K+G G + V+ L+ Y K ++ S+ ++FDE D++VVSW SMI+G V N +
Sbjct: 576 HGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFS 635
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
L F +M V + TL + V ACA + +L G+ LHG +K L
Sbjct: 636 HSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTL 695
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
LDMY KCGN+ DA F+++ +VSWT++I Y + G D A++LF + + P+
Sbjct: 696 LDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDV 755
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
++ SVL A A +L+ GR VH+ + + V NAL+DMYAKC + +A +F
Sbjct: 756 YSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQ 815
Query: 407 TSEKDVIAWNSIISGLDDNV----------------SPDAVTLVSVISACASLGAVQVGS 450
KD+++WN++I G N PD +T+ ++ AC SL A+++G
Sbjct: 816 IPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGR 875
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H + G SS ++V AL++ Y KCG AR++FD + EK+ +TW+ MI G GM
Sbjct: 876 GIHGCILRNGY-SSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMH 934
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G ++A F M ++P+E+ FT+IL ACSH+G++ EGW F SM + P ++H
Sbjct: 935 GLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEH 994
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVDLLAR G L +A +E MPI+PD +++GA L GC ++ +L E + + + EL
Sbjct: 995 YACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFELE 1054
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
PD A YYVL++N+YA +W V ++RE + +RGL KSPGCS +++
Sbjct: 1055 PDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEV 1100
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 263/540 (48%), Gaps = 31/540 (5%)
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-L 186
++ VE + +K E D +S +L+ C E + + EG VH I G P VL L
Sbjct: 435 RNAVELLRMSQK--SELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKL 492
Query: 187 VDMYAKCRDIGSSRQVFDETL-DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
V MY C + R++FD L D V W M++ Y + +E + LF +M++ + GN
Sbjct: 493 VFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGN 552
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T ++ A L + + K +HG + K+G + +V +L+ Y K G + A +FD
Sbjct: 553 SYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFD 612
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
EL D+VSW +MI G +G+ AL+ F + T+ + ++A A +G+L++
Sbjct: 613 ELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSL 672
Query: 366 GRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS---- 420
GR +H G++ + N L+DMY+KC + DA FE +K V++W S+I+
Sbjct: 673 GRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVR 732
Query: 421 -GLDDN------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
GL D+ VSPD ++ SV+ ACA ++ G +H Y K ++ +
Sbjct: 733 EGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNN-MALCLP 791
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V AL++ YAKCG + A +VF + K+ V+W+ MIGGY +L LF++M +E
Sbjct: 792 VSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM-QKE 850
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+P+ + +L AC + G + R+ + + ++D+ + G L A
Sbjct: 851 SRPDGITMACLLPACGSLAALEIGRGIHGCILRN-GYSSELHVANALIDMYVKCGSLVHA 909
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM--LELHPDKACYYVLVSNLYA 645
+ +P E D+ + + GCG++ + +KM + PD+ + S LYA
Sbjct: 910 RLLFDMIP-EKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITF---TSILYA 965
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/648 (33%), Positives = 358/648 (55%), Gaps = 24/648 (3%)
Query: 53 LNLLGLCKSTGSLKA---FHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
L++L C ++ +L+A H+ + DG ++D + L+SMY G + AR +F +MP
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK 393
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D S+ +I Y + + + YK M+ + F +L AC +G +
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +I++ G + + L++MY +C + ++ VF+ T ++V+SW SMIAG+ Q+
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ LF M+ +E + IT S+++ C AL GK +HG I + G++++ +L AL
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNAL 573
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++MY++CG+++DAR+VF L D++SWTAMI G G KA++LF + F P
Sbjct: 574 INMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVK 633
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T +S+L L+ G+ V + + G E D V NAL+ Y+K + DAR +F+
Sbjct: 634 STFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDK 693
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+D+++WN II+G N V P+ + VS+++AC+S A++ G
Sbjct: 694 MPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEG 753
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA K+ L +V VG AL++ YAKCG A+ VFD + EKN VTW+AMI Y
Sbjct: 754 KRVHAEIVKRKL-QGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQ 812
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G +L F+ M E ++P+ FT+ILSAC+H G+V EG++ F SM ++ +P+++
Sbjct: 813 HGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIE 872
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY C+V LL RA R +EA + MP PD +++ L C ++ L E L+L
Sbjct: 873 HYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKL 932
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ Y+L+SN+YA+ GRW V ++R +M+ RG+ K PG S +++D
Sbjct: 933 NARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVD 980
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/599 (29%), Positives = 305/599 (50%), Gaps = 31/599 (5%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDS 105
I +++L C S L K H+ +I G D + L+SMYG G + AR VF
Sbjct: 129 ITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAG 188
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ D S+ M+ Y K+ + + M D + +L A +DEG
Sbjct: 189 ISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H V+ G D V T LV M +C D+ S++Q F T D++VV + ++IA Q+
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQH 308
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E + RMR V N+ T S++ AC+ +AL GK +H +I + G + +
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+ MY +CG++ AR +F + DL+SW A+I GY + +A++L+ +
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P VT +LSA A G+M+H +R G++ + + NAL++MY +C + +A+ +
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV 488
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
FE T +DVI+WNS+I+G ++ + PD +T SV+S C + A+
Sbjct: 489 FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEAL 548
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++G +H T+ G L +V +G AL+N Y +CG Q AR VF +++ ++ ++W+AMIGG
Sbjct: 549 ELGKQIHGRITESG-LQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGG 607
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFV 565
QG+ ++ LF M NE +P + F++IL C+ + + EG K Y + ++
Sbjct: 608 CADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELD 667
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
+ + ++ +++G + +A E + MP D+ + + G Y++ LG+ ++
Sbjct: 668 TGVGN--ALISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAG---YAQNGLGQTAVE 720
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 271/526 (51%), Gaps = 26/526 (4%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
+ R E + + +L+ C R + E ++H ++V+ GPD F+ L++MY KCR +
Sbjct: 19 QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ QVF E ++V+SW S+I+ Y Q ++ LF M+ N+IT S++TAC
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
L GK +H I+K G + + + +LL MY KCG++ AR VF + D+VS+
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
M+ Y Q Y + L LF P+ VT ++L A L+ G+ +H L +
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
GL D V ALV M +C + A+ F+ T+++DV+ +N++I+ L
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQY 318
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
D V+ + T +S+++AC++ A++ G +H++ ++ G SS+V +G AL++ YA+
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG-HSSDVQIGNALISMYAR 377
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CGD AR +F M +++ ++W+A+I GY + D G ++ L+ M +E V+P V F +
Sbjct: 378 CGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHL 437
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIE 597
LSAC+++ +G + R + S H ++++ R G L EA E
Sbjct: 438 LSACANSSAYADGKMIHEDILRS--GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVS 641
DV + + + G + ++ + ++M EL PD + ++S
Sbjct: 496 -DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 157/563 (27%), Positives = 273/563 (48%), Gaps = 29/563 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++MY V A VF MP D S+ +I Y K + ++ M+ +
Sbjct: 68 LINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPN 127
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +L AC +++ G K+H +I+K G D V L+ MY KC D+ +RQVF
Sbjct: 128 KITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFA 187
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++VVS+ +M+ Y Q +E L LF +M + +++T +L+ A L +
Sbjct: 188 GISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE 247
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H ++ G+ + + TAL+ M V+CG++ A+ F D+V + A+I Q
Sbjct: 248 GKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQ 307
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTV 383
G+ +A + + + N T S+L+A + L G+++HS G D +
Sbjct: 308 HGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQI 367
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
NAL+ MYA+C + AR +F T ++D+I+WN+II+G + V
Sbjct: 368 GNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGV 427
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
P VT + ++SACA+ A G +H + G + SN ++ AL+N Y +CG A+
Sbjct: 428 KPGRVTFLHLLSACANSSAYADGKMIHEDILRSG-IKSNGHLANALMNMYRRCGSLMEAQ 486
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ + ++ ++W++MI G+ G + LF +M NEE++P+ + F ++LS C +
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+ G K + + + ++++ R G L++A ++ DV + A
Sbjct: 547 ALELG-KQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAM 604
Query: 607 LHGCGLYSRFDLGEVMIKKMLEL 629
+ GC D GE M K +EL
Sbjct: 605 IGGCA-----DQGEDM--KAIEL 620
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/656 (35%), Positives = 355/656 (54%), Gaps = 32/656 (4%)
Query: 45 HSLPSIP--CLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARS 101
H+ P + C + +CK H ++ G D L+ +YG+ G + AR
Sbjct: 160 HTFPFVLKLCSDSFDICKGM----EVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARR 215
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV-FSKVLKACCELR 160
+FD MP D S+ +I +N Y + +Y M R N V +L L
Sbjct: 216 LFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALE 275
Query: 161 DIDEGMKVHCEIVKVGGPDSFVLT--GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
D + ++HC VKVG DS V T LVD Y KC + + QVF+ET++KN VSW S+I
Sbjct: 276 DEEMTRRIHCYSVKVG-LDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSII 334
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
G + L F M + + N +T+ S++ +L GK +HG+ +++G E
Sbjct: 335 NGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTE 394
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ + +L+DMY K G+ +A ++F L ++VSW AMI Y + P +A++
Sbjct: 395 TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQM 454
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVI 397
+ PN VT +VL A A+LG L G+ +H++G+R+GL D V N+L+DMYAKC +
Sbjct: 455 QETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 514
Query: 398 ADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISAC 440
AR +F TS KD +++N +I G + PD V+ V VISAC
Sbjct: 515 HSARNVF-NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISAC 573
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
A+L A++ G +H + + L S+++V +LL+FY KCG A +F+ + K+ +W
Sbjct: 574 ANLAALKQGKEVHGVALRNHLY-SHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASW 632
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
+ MI GYGM G+ ++++F M ++ VQ + V + +LSACSH G+V GW+ F M
Sbjct: 633 NTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLA 692
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ P+ HY CMVDLL RAG +EEA + ++ +PI PD +++GA L C +Y +LG
Sbjct: 693 Q-RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGR 751
Query: 621 VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ + EL P YY+L+SN+YA GRW N++RELMK RG K+PGCS V +
Sbjct: 752 RAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQI 807
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 181/621 (29%), Positives = 295/621 (47%), Gaps = 44/621 (7%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDKCN--TKLVSMYGSFGHVKYARSVFDSMP 107
+NLL LC SL K HAL I++G + L+ Y F H F S+
Sbjct: 58 INLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQH----PGSFCSLF 113
Query: 108 NPDFYSFQVMIRWYFLNDLYK-------DIVEFYKCMRKRLKEHDNFVFSKVLKACCELR 160
N F + + W L + D E Y M +R + D+ F VLK C +
Sbjct: 114 NQTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSF 173
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
DI +GM+VH + K+G D +V L+ +Y C + +R++FDE +++VVSW ++I
Sbjct: 174 DICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIG 233
Query: 220 GY-VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
V D + F + ++ N +++ SL+ A L + +H Y +K+G++
Sbjct: 234 LLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLD 293
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
AL+D Y KCG+++ VF+E + VSW ++I G G AL F
Sbjct: 294 SQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMM 353
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVI 397
A PN VTI+S+L +L G+ +H +R+G E D + N+L+DMYAK
Sbjct: 354 IDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHS 413
Query: 398 ADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISAC 440
+A IF +++++WN++I+ N P+AVT +V+ AC
Sbjct: 414 TEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPAC 473
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
A LG + G +HA + G L+S+++V +L++ YAKCG SAR VF+ R K+ V++
Sbjct: 474 ARLGFLGPGKEIHAMGVRIG-LTSDLFVSNSLIDMYAKCGCLHSARNVFNTSR-KDEVSY 531
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
+ +I GY D SL LFS+M +P+ V F ++SAC++ + +G + R
Sbjct: 532 NILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALR 591
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ + + ++D + GR++ A N + DV+ + + G G+ +
Sbjct: 592 NHLY-SHLFVSNSLLDFYTKCGRIDIACRLF-NQILFKDVASWNTMILGYGMIGELETAI 649
Query: 621 VMIKKMLELHPDKACYYVLVS 641
M + M D Y LVS
Sbjct: 650 SMFEAM----RDDTVQYDLVS 666
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 223/465 (47%), Gaps = 26/465 (5%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVL-TGLVDMYAKCRDIGSSRQVFD 204
++ +L C +++ + + +VH + G P S L L+ YAK + GS +F+
Sbjct: 55 YIHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFN 114
Query: 205 ETLD--KNVVSWTSMIAGY-VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+T + W ++I + + + +G +NRM V+ + T ++ C+
Sbjct: 115 QTFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFD 174
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+ +G +HG + K+G + + ++ LL +Y CG + DAR +FDE+ D+VSW +I
Sbjct: 175 ICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGL 234
Query: 322 YTQSG-YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
+ +G Y + F + PN V++ S+L SA L + M R +H +++GL+
Sbjct: 235 LSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDS 294
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------- 422
T NALVD Y KC + +F T EK+ ++WNSII+GL
Sbjct: 295 QVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMMI 354
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
D P++VT+ S++ L + G +H +S + G +++++ +L++ YAK G +
Sbjct: 355 DAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMG-TETDIFIANSLIDMYAKSGHS 413
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A +F + +N V+W+AMI Y + ++ M PN V FT +L AC
Sbjct: 414 TEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPAC 473
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ G +G G K ++M + ++D+ A+ G L A
Sbjct: 474 ARLGFLGPG-KEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSA 517
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/656 (35%), Positives = 355/656 (54%), Gaps = 32/656 (4%)
Query: 45 HSLPSIP--CLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARS 101
H+ P + C + +CK H ++ G D L+ +YG+ G + AR
Sbjct: 11 HTFPFVLKLCSDSFDICKGM----EVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARR 66
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV-FSKVLKACCELR 160
+FD MP D S+ +I +N Y + +Y M R N V +L L
Sbjct: 67 LFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALE 126
Query: 161 DIDEGMKVHCEIVKVGGPDSFVLT--GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
D + ++HC VKVG DS V T LVD Y KC + + QVF+ET++KN VSW S+I
Sbjct: 127 DEEMTRRIHCYSVKVG-LDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSII 185
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
G + L F M + + N +T+ S++ +L GK +HG+ +++G E
Sbjct: 186 NGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTE 245
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ + +L+DMY K G+ +A ++F L ++VSW AMI Y + P +A++
Sbjct: 246 TDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQM 305
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVI 397
+ PN VT +VL A A+LG L G+ +H++G+R+GL D V N+L+DMYAKC +
Sbjct: 306 QETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCL 365
Query: 398 ADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISAC 440
AR +F TS KD +++N +I G + PD V+ V VISAC
Sbjct: 366 HSARNVF-NTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISAC 424
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
A+L A++ G +H + + L S+++V +LL+FY KCG A +F+ + K+ +W
Sbjct: 425 ANLAALKQGKEVHGVALRNHLY-SHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASW 483
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
+ MI GYGM G+ ++++F M ++ VQ + V + +LSACSH G+V GW+ F M
Sbjct: 484 NTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEMLA 543
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ P+ HY CMVDLL RAG +EEA + ++ +PI PD +++GA L C +Y +LG
Sbjct: 544 Q-RLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGR 602
Query: 621 VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ + EL P YY+L+SN+YA GRW N++RELMK RG K+PGCS V +
Sbjct: 603 RAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQI 658
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 260/525 (49%), Gaps = 28/525 (5%)
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD 195
M +R + D+ F VLK C + DI +GM+VH + K+G D +V L+ +Y C
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGY-VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
+ +R++FDE +++VVSW ++I V D + F + ++ N +++ SL+
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
A L + +H Y +K+G++ AL+D Y KCG+++ VF+E + VS
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVS 180
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W ++I G G AL F A PN VTI+S+L +L G+ +H +
Sbjct: 181 WNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSM 240
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------- 422
R+G E D + N+L+DMYAK +A IF +++++WN++I+
Sbjct: 241 RMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIR 300
Query: 423 ------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ P+AVT +V+ ACA LG + G +HA + G L+S+++V +L++ Y
Sbjct: 301 FVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIG-LTSDLFVSNSLIDMY 359
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG SAR VF+ R K+ V+++ +I GY D SL LFS+M +P+ V F
Sbjct: 360 AKCGCLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFV 418
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
++SAC++ + +G + R+ + + ++D + GR++ A N +
Sbjct: 419 GVISACANLAALKQGKEVHGVALRNHLY-SHLFVSNSLLDFYTKCGRIDIACRLF-NQIL 476
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
DV+ + + G G+ + M + M D Y LVS
Sbjct: 477 FKDVASWNTMILGYGMIGELETAISMFEAM----RDDTVQYDLVS 517
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 222/644 (34%), Positives = 359/644 (55%), Gaps = 23/644 (3%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L L+ + L HA +I++GL ND TKL + A +F ++PNPD
Sbjct: 14 LTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDL 73
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ + V+IR + LN+ V Y +RK E DNF ++ V+ L
Sbjct: 74 FLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAH-- 131
Query: 171 EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
IV G D FV + +V Y K + ++R+VFD L+++ V W +M++G V+N C E
Sbjct: 132 SIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEA 191
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+++F M +G + + T+ +++ A+L+ L G + +K+G +++++T L +
Sbjct: 192 ILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACL 251
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KCG I AR +F ++ DLVS+ AMI GYT + + +++LF + + N +I
Sbjct: 252 YSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSI 311
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSE 409
++ G+L++ R +H + G+ + + AL +Y++ + I AR +F+ +SE
Sbjct: 312 VGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSE 371
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
K + +WN++ISG N V P+ VT+ S++SACA LGA+ +G +
Sbjct: 372 KSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWV 431
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H ++ SN++V TAL++ YAKCG A+ +F M EKN VTW+AMI GYG+ G
Sbjct: 432 HDLINRESF-ESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGY 490
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
G +L LF++ML+ V P V F ++L ACSH G+V EG + F SM D F P +HY
Sbjct: 491 GHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYA 550
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
CMVDLL RAG L++AL+F+ MP+EP ++GA L C ++ +L + K+ EL P
Sbjct: 551 CMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQ 610
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YYVL+SN+Y++ + VR ++K+R L+K+PGC+L+++
Sbjct: 611 NVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEV 654
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/613 (35%), Positives = 338/613 (55%), Gaps = 20/613 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L+ Y G + AR +FD MP+ D + VM+ Y N + + + MR+
Sbjct: 186 SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN 245
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
++ F+ VL C I+ G ++H +V G DS V L+ MYAKC + +R++
Sbjct: 246 PNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRL 305
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD ++V+W MI+GYVQN E LF+ M ++ + IT S + ++ L
Sbjct: 306 FDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATL 365
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
QGK +H YI++ G+ ++ L +AL+D+Y KC ++ AR +FD+ +D+V TAMI GY
Sbjct: 366 RQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGY 425
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
+G + AL++F N VT+ASVL A A L L +G+ +H ++ G
Sbjct: 426 VLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSC 485
Query: 383 VI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP------------- 428
+ +A++DMYAKC + A F S+KD + WNS+I+ N P
Sbjct: 486 YVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA 545
Query: 429 ----DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
D V++ + +SACA+L A+ G +HA+ + G S+++ +AL++ Y+KCG+
Sbjct: 546 GTKYDCVSISAALSACANLPALHYGKEIHAFMMR-GAFRSDLFAESALIDMYSKCGNLDL 604
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A VFD M EKN V+W+++I YG G SL LF ML + +QP+ V F I+SAC H
Sbjct: 605 ACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGH 664
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G V EG F M + + M+HY CMVDL RAGRL EA + +MP PD ++G
Sbjct: 665 AGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWG 724
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
L C L+ +L EV + + +L P + YYVL+SN++A+ G+W V ++R LMK+RG
Sbjct: 725 TLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERG 784
Query: 665 LSKSPGCSLVDLD 677
+ K PGCS +D++
Sbjct: 785 VQKVPGCSWIDVN 797
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 174/595 (29%), Positives = 288/595 (48%), Gaps = 25/595 (4%)
Query: 69 HALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA ++V+G+ N TKL+ MY G A+++F + + MIR + + +
Sbjct: 69 HAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQF 128
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGL 186
+ FY M D + F V+KAC L + G VH +I +G D FV + L
Sbjct: 129 DFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSL 188
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ Y++ I +R +FD K+ V W M+ GYV+N +F MR N
Sbjct: 189 IKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNS 248
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+T +++ CA ++ G LHG ++ G+E++S + LL MY KCG++ DAR +FD
Sbjct: 249 VTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDM 308
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ DLV+W MI GY Q+G+ D+A LF + A P+ +T +S L ++ L G
Sbjct: 309 MPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQG 368
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+ +H IR G+ D + +AL+D+Y KC + AR IF+ + D++ ++ISG
Sbjct: 369 KEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLN 428
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
L + + ++VTL SV+ ACA L A+ +G LH + K G S YV
Sbjct: 429 GMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS-CYV 487
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
G+A+++ YAKCG A F + +K+ V W++MI G ++ LF M
Sbjct: 488 GSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 547
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+ + V + LSAC++ + G + M R F + ++D+ ++ G L+ A
Sbjct: 548 KYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNLDLAC 606
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVS 641
+ M + +VS + + + G + R + ML + PD + ++S
Sbjct: 607 RVFDTMEEKNEVS-WNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 660
Score = 155 bits (392), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 153/321 (47%), Gaps = 19/321 (5%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L S++ C L QG+ H +L GI N L T LL MYV CG DA+++F +L
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
W MI G+T G D AL + P+ T V+ A L ++ +GR+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 369 VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-- 425
VH +G E D V ++L+ Y++ I DARY+F+ KD + WN +++G N
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
+P++VT V+S CAS + GS LH G L + V
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG-LEMDSPVAN 287
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
LL YAKCG AR +FD M + + VTW+ MI GY G + LF +M++ ++P
Sbjct: 288 TLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKP 347
Query: 531 NEVIFTTILSACSHTGMVGEG 551
+ + F++ L S + +G
Sbjct: 348 DSITFSSFLPLLSEGATLRQG 368
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 91/221 (41%), Gaps = 8/221 (3%)
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
DD+++P LVS++ C + G HA G + N +GT LL Y CG
Sbjct: 42 DDSLAPQ---LVSILQTCTDPSGLSQGRQAHAQMLVNG-IGYNGILGTKLLGMYVLCGAF 97
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A+ +F +R + W+ MI G+ M G +L + ML P++ F ++ AC
Sbjct: 98 LDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKAC 157
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
V G + + + F + ++ + G + +A + MP D L
Sbjct: 158 GGLNSVALG-RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP-SKDGVL 215
Query: 603 FGAFLHGCGLYSRFD--LGEVMIKKMLELHPDKACYYVLVS 641
+ L+G +D G M + E +P+ + ++S
Sbjct: 216 WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLS 256
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/549 (38%), Positives = 321/549 (58%), Gaps = 21/549 (3%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ +LK C D+ G VH ++ G P++ T L +MYAKCR G +R+VFD
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE-GNQITLGSLVTACAKLRALHQG 265
++ V+W +++AGY +N A+ + + RM+E E + +TL S++ ACA +AL
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ +H + ++ G + ++ TA+LD+Y KCG + AR VFD + + VSW AMI GY ++
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
G +AL LF V++ + L A +LG L+ GR VH L +R+GLE + V+
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVS 427
NAL+ MY KC A +F+ K ++WN++I G +NV
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD+ TLVS+I A A + +H YS + L +VYV TAL++ YAKCG AR
Sbjct: 527 PDSFTLVSIIPALADISDPLQARWIHGYSIRLHL-DQDVYVLTALIDMYAKCGRVSIARS 585
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F++ R+++ +TW+AMI GYG G G ++ LF +M + PNE F ++LSACSH G+
Sbjct: 586 LFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGL 645
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG + F SM D+ P M+HY MVDLL RAG+L EA F++ MP+EP +S++GA L
Sbjct: 646 VDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAML 705
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C L+ +L E +++ EL P++ Y+VL++N+YA+ W V +VR M+++GL K
Sbjct: 706 GACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQK 765
Query: 668 SPGCSLVDL 676
+PG S+V L
Sbjct: 766 TPGWSIVQL 774
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 161/513 (31%), Positives = 254/513 (49%), Gaps = 29/513 (5%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+LL LC + L +A HA L GL+ + T L +MY AR VFD MP
Sbjct: 230 SLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPAR 289
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH-DNFVFSKVLKACCELRDIDEGMKV 168
D ++ ++ Y N L + V M++ E D VL AC + + + +V
Sbjct: 290 DRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREV 349
Query: 169 HCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H V+ G + V T ++D+Y KC + S+R+VFD D+N VSW +MI GY +N A
Sbjct: 350 HAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDA 409
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E L LF RM V+ +++ + + AC +L L +G+ +H +++IG+E N +++ AL
Sbjct: 410 TEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNAL 469
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MY KC A VFDEL VSW AMI+G TQ+G + A++LF+ + + P+
Sbjct: 470 ITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDS 529
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFET 406
T+ S++ A A + + R +H IRL L +D V+ AL+DMYAKC ++ AR +F +
Sbjct: 530 FTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNS 589
Query: 407 TSEKDVIAWNSIISGLDDNVS-----------------PDAVTLVSVISACASLGAVQVG 449
++ VI WN++I G + S P+ T +SV+SAC+ G V G
Sbjct: 590 ARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEG 649
Query: 450 SS-LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGY 507
+ GL + GT +++ + G A M E + AM+G
Sbjct: 650 QEYFSSMKEDYGLEPGMEHYGT-MVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGAC 708
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + LA S E++P E ++ +L+
Sbjct: 709 KLHKN--VELAEESAQRIFELEPEEGVYHVLLA 739
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 182/356 (51%), Gaps = 13/356 (3%)
Query: 47 LPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDS 105
LP+ LG C+ HA + G +T ++ +Y G V AR VFD
Sbjct: 334 LPACADAQALGACREV------HAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDG 387
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M + + S+ MI+ Y N + + +K M + + L AC EL +DEG
Sbjct: 388 MQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEG 447
Query: 166 MKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+VH +V++G + V+ L+ MY KC+ + QVFDE K VSW +MI G QN
Sbjct: 448 RRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQN 507
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+++ + LF+RM+ V+ + TL S++ A A + Q +W+HGY +++ ++ + +++
Sbjct: 508 GSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVL 567
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
TAL+DMY KCG + ARS+F+ +++W AMI GY G A++LF + K +
Sbjct: 568 TALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKV 627
Query: 345 PNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCH 395
PN T SVLSA + G ++ G+ M G+ G+E Y + L+ K H
Sbjct: 628 PNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLH 683
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 343/613 (55%), Gaps = 21/613 (3%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KL +Y S V AR +FD +PNP + +IR Y N + ++ Y M
Sbjct: 48 KLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRP 107
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ + + VLKAC L I++G+++H G D FV T LVD YAKC + ++++F
Sbjct: 108 NKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLF 167
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
++VV+W +MIAG + + L +M+E + N T+ ++ + +AL
Sbjct: 168 SSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALG 227
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK LHGY ++ + + T LLDMY KC + AR +FD + + VSW+AMI GY
Sbjct: 228 HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV 287
Query: 324 QSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDY 381
S +AL+LF D P VT+ SVL A A+L +L+ GR +H I+LG + D
Sbjct: 288 XSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDI 347
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
+ N L+ MYAKC VI DA F+ + KD +++++I+SG N
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ PD T++ V+ AC+ L A+Q G H Y +G +++ + AL++ Y+KCG
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGF-ATDTLICNALIDMYSKCGKISF 466
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR VF+ M + V+W+AMI GYG+ G G +L LF D+L ++P+++ F +LS+CSH
Sbjct: 467 AREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSH 526
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+G+V EG F +M RDF VP M+H +CMVD+L RAG ++EA F+ NMP EPDV ++
Sbjct: 527 SGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWS 586
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
A L C ++ +LGE + KK+ L P+ +VL+SN+Y++ GRW +R K G
Sbjct: 587 ALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWG 646
Query: 665 LSKSPGCSLVDLD 677
L K PGCS ++++
Sbjct: 647 LKKIPGCSWIEIN 659
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/612 (35%), Positives = 343/612 (56%), Gaps = 20/612 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L++ Y + + A +FD MP+ + SF +I+ Y + + + + ++
Sbjct: 82 NNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGH 141
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
E + FVFS VLK G VH + K+G D+FV T L+D Y+ C +RQ
Sbjct: 142 ELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQ 201
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFD K++VSWT M+A YV+N+C +E L LF+RMR + N T S++ AC L
Sbjct: 202 VFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEV 261
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+ GK +HG K + L+D+Y+K G++ DA VF+E+ D++ W+ MI
Sbjct: 262 FNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIAR 321
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Y QS ++A+++F + PN T+AS+L A A L +L +G +H +++GL+ +
Sbjct: 322 YAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMN 381
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
V NAL+DMYAKC + ++ +F + ++WN++I G L+
Sbjct: 382 VFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLE 441
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V VT SV+ ACA + A++ GS +H+ S K + N VG AL++ YAKCG+ +
Sbjct: 442 CQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKT-IYDKNTVVGNALIDMYAKCGNIK 500
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR+VFD +RE + V+W+AMI GY + G G +L F ML E +P++V F ILSACS
Sbjct: 501 DARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACS 560
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
+ G++ G F SM ++ P +HY CMV LL R+G L++A + + +P EP V ++
Sbjct: 561 NAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVW 620
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
A L C +++ +LG + +++LE+ P+ +VL+SN+YA+ RW V +R MK++
Sbjct: 621 RALLSACVIHNDVELGRISAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRK 680
Query: 664 GLSKSPGCSLVD 675
G+ K PG S ++
Sbjct: 681 GIRKEPGLSWIE 692
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 262/545 (48%), Gaps = 53/545 (9%)
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
E + +++ +L++C D G +HCEI+K G D F L++ Y K + + +
Sbjct: 41 EFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAK 100
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FDE D+N VS+ ++I GY Q E + LF+R++ E N +++
Sbjct: 101 LFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEW 160
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
G +H + K+G + ++ + TAL+D Y CG AR VFD + D+VSWT M+
Sbjct: 161 AKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVAC 220
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LED 380
Y ++ +++LKLF+ + F PN+ T ASVL A L N+G+ VH + LE+
Sbjct: 221 YVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEE 280
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V L+D+Y K + DA +FE + DVI W+ +I+ +
Sbjct: 281 LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRR 340
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V P+ TL S++ ACASL +Q+G+ +H + K G L NV+V AL++ YAKCG +
Sbjct: 341 GLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVG-LDMNVFVSNALMDMYAKCGRME 399
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
++ +F V+W+ +I GY G+G +L LF DML +VQ EV ++++L AC+
Sbjct: 400 NSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACA 459
Query: 544 ---------------------HTGMVGEGWKCFYSMC---RDFKFVPSM--KH----YVC 573
+VG Y+ C +D + V M +H +
Sbjct: 460 GIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNA 519
Query: 574 MVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
M+ + G EAL+ E+M +PD F L C D G+ K M+E +
Sbjct: 520 MISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEY 579
Query: 631 PDKAC 635
+ C
Sbjct: 580 DIEPC 584
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 174/389 (44%), Gaps = 24/389 (6%)
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
L R E N GSL+ +C + GK+LH I+K G ++ LL+ YV
Sbjct: 31 LAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYV 90
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K ++ DA +FDE+ + VS+ +I GY+Q +A+ LF+ + N ++
Sbjct: 91 KYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFST 150
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
VL +G VH+ +LG + D V AL+D Y+ C AR +F+ KD
Sbjct: 151 VLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKD 210
Query: 412 VIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA 454
+++W +++ +N P+ T SV+ AC L VG ++H
Sbjct: 211 MVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHG 270
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+ K L ++VG L++ Y K GD A VF+ M + + + WS MI Y
Sbjct: 271 CAFKTSYLEE-LFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSE 329
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-- 572
++ +F M V PN+ ++L AC+ + G + C K M +V
Sbjct: 330 EAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIH---CHVVKVGLDMNVFVSN 386
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVS 601
++D+ A+ GR+E +L+ P DVS
Sbjct: 387 ALMDMYAKCGRMENSLQLFSESPNCTDVS 415
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 224/649 (34%), Positives = 354/649 (54%), Gaps = 26/649 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
LN +S KA H +I G + + L Y GH+ YAR +FD MP
Sbjct: 22 LNHYAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHIAYARKLFDEMPQSSLL 81
Query: 113 SFQVMIRWYFLNDLYKDIVE-FYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ ++IR Y + LY D + F + + + +K D + + V KA EL+ I G+ +H
Sbjct: 82 SYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHG 141
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
I++ G D +V L+ MY + +R VFD +++V+SW +MI+GY +N +
Sbjct: 142 RILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMND 201
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L++F+ M V+ + T+ S++ C L+ L G+ +H + + + + AL++
Sbjct: 202 ALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY+KCG + +AR VF + D+++WT MI GY + G + AL+L ++ PN VT
Sbjct: 262 MYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTS 408
IAS++SA LN G+ +H IR + D + +L+ MYAKC I +F S
Sbjct: 322 IASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGAS 381
Query: 409 EKDVIAWNSIISG----------LD-------DNVSPDAVTLVSVISACASLGAVQVGSS 451
W++II+G LD ++V P+ TL S++ A A+L ++ +
Sbjct: 382 RNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMN 441
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK----NTVTWSAMIGGY 507
+H Y TK G +SS + T L++ Y+KCG +SA +F+ ++EK + V W A+I GY
Sbjct: 442 IHCYLTKTGFMSS-LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GM GDG +L +F +M+ V PNE+ FT+ L+ACSH+G+V EG F M +K +
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLAR 560
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
HY C+VDLL RAGRL+EA + +P EP +++GA L C + LGE+ K+
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLF 620
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
EL P+ YVL++N+YA+ GRW + +VR +M+ GL K PG S +++
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEI 669
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/489 (29%), Positives = 240/489 (49%), Gaps = 27/489 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ +L + I + +HC ++ G +L+ L YA C I +R++FDE
Sbjct: 18 YQSLLNHYAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHIAYARKLFDEMPQ 77
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGF-VEGNQITLGSLVTACAKLRALHQGK 266
+++S+ +I YV++ + + +F RM EG + T + A +L+++ G
Sbjct: 78 SSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGL 137
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG IL+ ++ ++ ALL MY+ G + AR+VFD + + D++SW MI GY ++G
Sbjct: 138 VIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNG 197
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL--GIRLGLEDYTVI 384
Y + AL +F P+H TI S+L L L MGR VH L RLG + V
Sbjct: 198 YMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLG-DKIEVK 256
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
NALV+MY KC + +AR++F +DVI W +I+G ++ V
Sbjct: 257 NALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVR 316
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+AVT+ S++SAC + G LH ++ +Q + S++ + T+L++ YAKC
Sbjct: 317 PNAVTIASLVSACGDALKLNDGKCLHGWAIRQK-VCSDIIIETSLISMYAKCKHIDLCFR 375
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF +T WSA+I G +L LF M E+V+PN ++L A +
Sbjct: 376 VFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLAD 435
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE---PDVSLFG 604
+ + + + F+ S+ +V + ++ G LE A + + + DV L+G
Sbjct: 436 LRQTMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 605 AFLHGCGLY 613
A + G G++
Sbjct: 495 ALISGYGMH 503
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/642 (33%), Positives = 356/642 (55%), Gaps = 27/642 (4%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
C K HALL+V G T + KL++ Y G + +AR FD + D Y++ M
Sbjct: 53 CTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSM 112
Query: 118 IRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG 176
I Y + V+ F + + + D++ F V++AC L D+G KVHC ++K+G
Sbjct: 113 ISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNL---DDGRKVHCLVLKLG 169
Query: 177 GP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
D ++ + Y++ + + +FD + +++ +W +MI+G+ N E L +F+
Sbjct: 170 FECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFD 229
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
MR V + +T+ SL+ C +L + G +H Y +K+G+E + + AL++MY K G
Sbjct: 230 EMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFG 289
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+R A ++F+++ D+VSW +++ + Q+ P AL ++ P+ +T+ S+ S
Sbjct: 290 ELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLAS 349
Query: 356 ASAQLGNLNMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
+A+LGN R +H R L D + NA++DMYAK I AR +FE KDVI
Sbjct: 350 VAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVI 409
Query: 414 AWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+WNS+I+G N P+ T VS+++A + LGA++ G H
Sbjct: 410 SWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQ 469
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K L +++V T L++ Y KCG A +F + +++V+W+A+I +G+ G G
Sbjct: 470 LIKN-FLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLK 528
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
++ LF +M +E V+P+ + F ++LSACSH+G+V EG CF M + PS+KHY CMV
Sbjct: 529 AVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMV 588
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DL RAG LE+A F++NMP+ PDVS++GA L C ++ +L + +L++ +
Sbjct: 589 DLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVG 648
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YYVL+SN+YA G W V++VR L + RGL K+PG S +++D
Sbjct: 649 YYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVD 690
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 343/613 (55%), Gaps = 21/613 (3%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KL +Y S V AR +FD +PNP + +IR Y N + ++ Y M
Sbjct: 48 KLTRLYLSCNQVVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRP 107
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ + + VLKAC L I++G+++H G D FV T LVD YAKC + ++++F
Sbjct: 108 NKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLF 167
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
++VV+W +MIAG + + L +M+E + N T+ ++ + +AL
Sbjct: 168 SSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALG 227
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK LHGY ++ + + T LLDMY KC + AR +FD + + VSW+AMI GY
Sbjct: 228 HGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYV 287
Query: 324 QSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDY 381
S +AL+LF D P VT+ SVL A A+L +L+ GR +H I+LG + D
Sbjct: 288 ASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDI 347
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
+ N L+ MYAKC VI DA F+ + KD +++++I+SG N
Sbjct: 348 LLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLS 407
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ PD T++ V+ AC+ L A+Q G H Y +G +++ + AL++ Y+KCG
Sbjct: 408 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGF-ATDTLICNALIDMYSKCGKISF 466
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR VF+ M + V+W+AMI GYG+ G G +L LF D+L ++P+++ F +LS+CSH
Sbjct: 467 AREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSH 526
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+G+V EG F +M RDF VP M+H +CMVD+L RAG ++EA F+ NMP EPDV ++
Sbjct: 527 SGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWS 586
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
A L C ++ +LGE + KK+ L P+ +VL+SN+Y++ GRW +R K G
Sbjct: 587 ALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWG 646
Query: 665 LSKSPGCSLVDLD 677
L K PGCS ++++
Sbjct: 647 LKKIPGCSWIEIN 659
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/552 (39%), Positives = 321/552 (58%), Gaps = 20/552 (3%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+F++ +VLK C + +D+ +VH C I ++ V+ L+ +Y +C + +R VF
Sbjct: 27 DSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVF 86
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D + K+ SW +MIAGYV++ A++ + LF M V+ N T ++ ACA L AL
Sbjct: 87 DALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALK 146
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +H I G+E + + TALL MY KCG+I +AR +FD L + D++SWT MI Y
Sbjct: 147 WGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYA 206
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
QSG +A +L + F PN +T S+L+A A G L + VH + GLE D
Sbjct: 207 QSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVR 266
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V ALV MYAK I DAR +F+ +DV++WN +I ++
Sbjct: 267 VGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEG 326
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
PDA+ +S+++ACAS GA++ +H ++ GL +V VGTAL++ Y+K G A
Sbjct: 327 CKPDAIMFLSILNACASAGALEWVKKIHRHALDSGL-EVDVRVGTALVHMYSKSGSIDDA 385
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R+VFD M+ +N V+W+AMI G G G +L +F M V+P+ V F +LSACSH
Sbjct: 386 RVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHA 445
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG + +M + + P + H CMVDLL RAGRL EA F++NM ++PD + +GA
Sbjct: 446 GLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGA 505
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C Y +LGE++ K+ L+L P A YVL+SN+YA G+W V+ VR +M++RG+
Sbjct: 506 LLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGI 565
Query: 666 SKSPGCSLVDLD 677
K PG S +++D
Sbjct: 566 RKEPGRSWIEVD 577
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 207/451 (45%), Gaps = 32/451 (7%)
Query: 55 LLGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C S +LK HA + GL +D + T L+ MYG G + AR +FD++ N D
Sbjct: 135 ILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHD 194
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ VMI Y + K+ M + + + + +L AC + +VH
Sbjct: 195 IISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHR 254
Query: 171 EIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+ G D V T LV MYAK I +R VFD ++VVSW MI + ++ E
Sbjct: 255 HALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHE 314
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
LF +M+ + + I S++ ACA AL K +H + L G+E++ + TAL+
Sbjct: 315 AYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVH 374
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY K G+I DAR VFD + ++VSW AMI G Q G AL++F P+ VT
Sbjct: 375 MYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVT 434
Query: 350 IASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
+VLSA + G ++ GR M GI D + N +VD+ + + +A+
Sbjct: 435 FVAVLSACSHAGLVDEGRSQYLAMTQVYGIE---PDVSHCNCMVDLLGRAGRLMEAKLFI 491
Query: 405 ETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ + V PD T +++ +C + G V++G + K ++
Sbjct: 492 DNMA-----------------VDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNA 534
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
YV L N YA+ G V MRE+
Sbjct: 535 ATYV--LLSNIYAEAGKWDMVSWVRTMMRER 563
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 7/178 (3%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFD 104
+I L++L C S G+L K H + GL D + T LV MY G + AR VFD
Sbjct: 331 AIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFD 390
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
M + S+ MI + L +D +E ++ M + D F VL AC +DE
Sbjct: 391 RMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDE 450
Query: 165 GMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIA 219
G + + +V G PD +VD+ + + ++ D +D + +W +++
Sbjct: 451 GRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLG 508
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/589 (36%), Positives = 339/589 (57%), Gaps = 20/589 (3%)
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP+ + SF +I+ Y + ++V+ + + + E + FVF+ +LK + +
Sbjct: 1 MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60
Query: 166 MKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H I K+G ++FV T L+D YA C + S+RQ FD K++VSWT M+A Y +N
Sbjct: 61 YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
D Q+ L LF MR N T ++ AC L A GK +HG +LK E++ ++
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
LLD+Y K G+ D VF+E+ D++ W+ MI Y QS +A++LF + A
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
PN T ASVL + A + NL +G+ VH +++GL+ + V NAL+D+YAKC + ++ +
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
F ++ + WN++I G L+ V VT SV+ ACASL A+
Sbjct: 301 FMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAM 360
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++G+ +H+ S K + +V VG AL++ YAKCG ++AR+VFD + E++ ++W+AMI G
Sbjct: 361 ELGTQIHSLSLKT-IYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISG 419
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
Y M G G +L F M E PN++ F +ILSACS+ G++ G F SM +D+ P
Sbjct: 420 YSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEP 479
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
M+HY CMV LL R+G L++A++ +E +P+EP+V ++ A L C +++ DLG + +++
Sbjct: 480 CMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQI 539
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
L++ P +VL+SN+YA RW V VR+ MK +G+ K PG S ++
Sbjct: 540 LQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIE 588
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 165/560 (29%), Positives = 274/560 (48%), Gaps = 50/560 (8%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
+N T L+ Y G V AR FD++ D S+ M+ Y ND ++D ++ + M
Sbjct: 74 SNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEM 133
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDI 196
R ++F F+ VLKAC L G VH C + D +V GL+D+Y K D
Sbjct: 134 RMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDA 193
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+VF+E +V+ W+ MI+ Y Q++ ++E + LF +MR FV NQ T S++ +C
Sbjct: 194 NDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSC 253
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A + L GK +H ++LK+G++ N + AL+D+Y KCG + ++ +F EL + + V+W
Sbjct: 254 ASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWN 313
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR- 375
MIVGY QSG DKAL L+ + + VT +SVL A A L + +G +HSL ++
Sbjct: 314 TMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKT 373
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
+ +D V NAL+DMYAKC I +AR +F+ SE+D I+WN++ISG
Sbjct: 374 IYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAF 433
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ P+ +T VS++SAC++ G + +G + + + + T ++ +
Sbjct: 434 QMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGR 493
Query: 479 CGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
G A +++ + E N W A++G + D L + S ++ P +
Sbjct: 494 SGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHND--VDLGIMSAQQILQIDPQDEATHV 551
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI- 596
+LS Y+ R + V S++ + + + + E L ++EN I
Sbjct: 552 LLSN-------------IYARTRRWNSVASVRKF-----MKNKGVKKEPGLSWIENQGIV 593
Query: 597 ---------EPDVSLFGAFL 607
PD+ + L
Sbjct: 594 HYFSVGDTSHPDMKMISGML 613
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 196/378 (51%), Gaps = 15/378 (3%)
Query: 57 GLCKSTGSLKAFHALLIVDGLTNDKC-------NTKLVSMYGSFGHVKYARSVFDSMPNP 109
G+ K+ L+AF V G C L+ +Y FG VF+ MP
Sbjct: 147 GVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKH 206
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
D + MI Y ++ ++ VE + MR+ + F F+ VL++C + ++ G +VH
Sbjct: 207 DVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVH 266
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
C ++KVG + FV L+D+YAKC + +S ++F E ++N V+W +MI GYVQ+
Sbjct: 267 CHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGD 326
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L L+ M E V+ +++T S++ ACA L A+ G +H LK + + + AL+
Sbjct: 327 KALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALI 386
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KCG+I++AR VFD L D +SW AMI GY+ G +ALK F + + PN +
Sbjct: 387 DMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKL 446
Query: 349 TIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYI 403
T S+LSA + G L++G+ MV GI +E YT + L+ H+ + I
Sbjct: 447 TFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSG--HLDKAVKLI 504
Query: 404 FETTSEKDVIAWNSIISG 421
E E +V W +++
Sbjct: 505 EEIPLEPNVKVWRALLGA 522
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/593 (35%), Positives = 342/593 (57%), Gaps = 20/593 (3%)
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VFD MP + SF +I Y ++ + + E + + E + FVF+ VLK +
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+ G VH ++KVG G ++F+ T L+D Y+ + +R+VFDE K++VSWT MIA
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
Y +NDC E L F++MR + N T ++ AC L+ GK +H +LK E +
Sbjct: 122 YAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERD 181
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
++ LL++Y +CG+ DA F ++ D++ W+ MI + QSG +KAL++F +
Sbjct: 182 LYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
A PN T +SVL ASA + +L++ + +H ++ GL D V NAL+ YAKC I
Sbjct: 242 AFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQ 301
Query: 400 ARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACAS 442
+ +FE S+++ ++WN+II L V VT S++ ACA+
Sbjct: 302 SMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACAT 361
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L A+++G +H + K + +V VG AL++ YAKCG + AR +FD + ++ V+W+A
Sbjct: 362 LAALELGLQVHCLTAKT-IYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
+I GY M G G ++ +F+ M + +P+E+ F +LSACS+TG + EG + F SM +D+
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDY 480
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P M+HY CMV L+ R+G L++A++F+E++P EP V ++ A L C +++ +LG +
Sbjct: 481 GIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRIS 540
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+++LEL P +VL+SN+YA RW V VR+ MK++G+ K PG S ++
Sbjct: 541 AQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIE 593
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 232/455 (50%), Gaps = 20/455 (4%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
+N T L+ Y G V AR VFD + + D S+ MI Y ND + + +EF+ M
Sbjct: 79 SNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQM 138
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
R + +NF F+ VLKAC L++ D G VHC ++K D +V GL+++Y +C D
Sbjct: 139 RVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDN 198
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ + F + +V+ W+ MI+ + Q+ +++ L +F +MR FV NQ T S++ A
Sbjct: 199 DDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQAS 258
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A + +L K +HG+ LK G+ + + AL+ Y KCG I + +F+ L + VSW
Sbjct: 259 ADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWN 318
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR- 375
+IV Y Q G ++AL LF++ VT +S+L A A L L +G VH L +
Sbjct: 319 TIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKT 378
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
+ +D V NAL+DMYAKC I DAR++F+ +D ++WN+II G
Sbjct: 379 IYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMF 438
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ PD +T V V+SAC++ G + G + + + T ++ +
Sbjct: 439 NLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGR 498
Query: 479 CGDA-QSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
G+ Q+ + + D E + + W A++G + D
Sbjct: 499 SGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHND 533
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 33/183 (18%)
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS-----A 541
MVFD M E+NTV++ +I GY + LF+ + E + N +FTT+L
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 542 CSHTGM--------VGEGWKCF--------------YSMCRD-FKFVPS--MKHYVCMVD 576
+ G VG G F SM R+ F + S M + M+
Sbjct: 61 WAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIA 120
Query: 577 LLARAGRLEEALEFMENMPI---EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
A EALEF M + +P+ F L C FD G+ + +L+ + ++
Sbjct: 121 SYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYER 180
Query: 634 ACY 636
Y
Sbjct: 181 DLY 183
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/653 (33%), Positives = 368/653 (56%), Gaps = 32/653 (4%)
Query: 65 LKAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
L HA LI +G +D TKL G ++AR++F S+P PD + F V+I+ +
Sbjct: 24 LAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSF 83
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--F 181
+ I + ++ DNF ++ + A D + GM +H V V G DS F
Sbjct: 84 SPDASSISFYTHLLKNTTLSPDNFTYAFAISAS---PDDNLGMCLHAHAV-VDGFDSNLF 139
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + LVD+Y K + +R+VFD+ D++ V W +MI G V+N C + + +F M
Sbjct: 140 VASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQG 199
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V + T+ +++ A A+++ + G + LK+G + +++T L+ ++ KC ++ AR
Sbjct: 200 VRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTAR 259
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+F + DLVS+ A+I G++ +G + A+K F + + + T+ ++ S+ G
Sbjct: 260 LLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFG 319
Query: 362 NLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L++ + ++ G + +V AL +Y++ + I AR +F+ +SEK V AWN++IS
Sbjct: 320 HLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMIS 379
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G + +P+ VT+ S++SACA LGA+ G S+H K L
Sbjct: 380 GYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQL-IKSKNLE 438
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
N+YV TAL++ YAKCG+ A +FD EKNTVTW+ MI GYG+ G G +L LF++M
Sbjct: 439 QNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEM 498
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
L+ QP+ V F ++L ACSH G+V EG + F++M ++ P +HY CMVD+L RAG+
Sbjct: 499 LHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQ 558
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
LE+ALEF+ MP+EP +++G L C ++ +L V +++ EL P YYVL+SN+
Sbjct: 559 LEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLSNI 618
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSRVVSL 690
Y+ + + + VRE +K+R LSK+PGC+L++++ + D S S+ S+
Sbjct: 619 YSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCGDRSHSQTTSI 671
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 237/653 (36%), Positives = 352/653 (53%), Gaps = 39/653 (5%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKCNT----KLVSMYGSFGHVKYARSVFDSMP 107
+L LC SL K H L+ L D + KLV MY G ++ AR VFD MP
Sbjct: 97 VLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMP 156
Query: 108 N-PDFYSFQVMIRWYF-LNDLYKDIVEFYK--CMRKRLKEHDNFVFSKVLKACCELRDID 163
D + ++ Y DL + ++ F K C R D + S VLK L I+
Sbjct: 157 QVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVR---PDAYTISCVLKCIAGLGSIE 213
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
+G VH + K+G G V L+ YAK + VFD ++V+SW SMI+G
Sbjct: 214 DGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCT 273
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQI---TLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
N + + LF RM ++EG ++ TL S++ ACA+L L G+ +HGY +K G
Sbjct: 274 SNGLYDKAIELFVRM---WLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFIS 330
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ L LLDMY C + R +F + ++VSWTAMI YT++G DK LF +
Sbjct: 331 QTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMG 390
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIA 398
P+ I S L A A L G+ VH IR G+E V NAL++MY KC +
Sbjct: 391 LEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNME 450
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACAS 442
+A+ IF+ KD+I+WN++I G N + P+AVT+ ++ A AS
Sbjct: 451 EAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQLRPNAVTMTCILPAAAS 510
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L +++ G +HAY+ ++G L + +V AL++ Y KCG AR +FD + KN ++W+
Sbjct: 511 LSSLERGREMHAYALRRGYLEDD-FVANALIDMYVKCGALLLARRLFDRLSNKNLISWTI 569
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
M+ GYGM G G ++ALF M + P+ F+ IL ACSH+G+ EGW+ F +M ++
Sbjct: 570 MVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEH 629
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
K P +KHY CMVDLL G L+EA EF+++MPIEPD S++ + L GC ++ L E +
Sbjct: 630 KIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEV 689
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+++ EL P+ YYVL++N+YA RW V +++ + RGL ++ GCS ++
Sbjct: 690 AERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIE 742
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/656 (34%), Positives = 362/656 (55%), Gaps = 29/656 (4%)
Query: 45 HSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYAR 100
H+LP + + C + G++ + H GL +D + L+ MY G ++ AR
Sbjct: 142 HTLPYV-----VKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDAR 196
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR 160
FD MP D + VM+ Y V ++ MR E + + L C
Sbjct: 197 DAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEA 256
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
D+ G+++H VK G + V L+ MYAKCR + + ++F+ ++V+W MI+
Sbjct: 257 DLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMIS 316
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
G VQN E L LF M + +TL SL+ A L L QGK +HGYI++ + +
Sbjct: 317 GCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHM 376
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
++ LV+AL+D+Y KC ++R AR+++D +ID+V + +I GY +G +KAL++F
Sbjct: 377 DAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLL 436
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIA 398
PN VT+ASVL A A + L +G+ +H +R E + +AL+DMYAKC +
Sbjct: 437 EQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLD 496
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDNVSP-----------------DAVTLVSVISACA 441
+ YIF S KD + WNS+IS N P + VT+ S +SACA
Sbjct: 497 LSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACA 556
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
SL A+ G +H K G + ++++ +AL++ YAKCG+ + A VF+ M +KN V+W+
Sbjct: 557 SLPAIYYGKEIHGVIIK-GPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWN 615
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
++I YG G S++ M E +P+ V F ++SAC+H G+V EG + F M ++
Sbjct: 616 SIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKE 675
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
+ P M+H+ CMVDL +R+GRL++A++F+ +MP +PD ++GA LH C ++ +L ++
Sbjct: 676 YLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADI 735
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+++ +L P + YYVL+SN+ A GRW V++VR LMK + K PG S VD++
Sbjct: 736 ASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVN 791
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 198/462 (42%), Gaps = 63/462 (13%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEIN-SHLV--TALLDMYVKCGNIRDARSVFD 305
L +L+ C L G +H + G N +HL T LL MYV RDA +VF
Sbjct: 35 LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFS 94
Query: 306 EL---CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW---ADFFPNHVTIASVLSASAQ 359
L + + W +I G+T +G+ A+ LF K W A P+ T+ V+ + A
Sbjct: 95 ALPRAAAGSSLPWNWLIRGFTAAGHHSLAV-LFYVKMWTHPAAPSPDAHTLPYVVKSCAA 153
Query: 360 LGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
LG +++GR+VH GL D V +AL+ MY+ ++ DAR F+ +D + WN +
Sbjct: 154 LGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVM 213
Query: 419 ISG------------LDDNV-----SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ G L N+ P+ TL +S CA+ + G LH+ + K G
Sbjct: 214 MDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCG- 272
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
L V V LL+ YAKC A +F+ + + VTW+ MI G G +L LF
Sbjct: 273 LEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFC 332
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC---------------------FYSMCR 560
DML +P+ V ++L A + + +G + Y CR
Sbjct: 333 DMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCR 392
Query: 561 DFKFVPSMKHYVCMVDLLARA---------GRLEEALE---FMENMPIEPDVSLFGAFLH 608
D + ++ +D++ + G E+AL+ ++ I+P+ + L
Sbjct: 393 DVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLP 452
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYY-VLVSNLYASDGR 649
C S LG+ + +L + CY + ++YA GR
Sbjct: 453 ACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGR 494
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 134/306 (43%), Gaps = 35/306 (11%)
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVI---NA 386
A ++ TD AD + ++L +L +G +H+ + G L ++ +
Sbjct: 22 ATEVVTDVSSAD------RLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTR 75
Query: 387 LVDMYAKCHVIADARYIFET---TSEKDVIAWNSIISGL-------------------DD 424
L+ MY DA +F + + WN +I G
Sbjct: 76 LLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPA 135
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
SPDA TL V+ +CA+LGAV +G +H + G L+S+VYVG+AL+ Y+ G +
Sbjct: 136 APSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATG-LASDVYVGSALIKMYSDAGLLRD 194
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR FD M ++ V W+ M+ GY GD GG++ LF +M +PN LS C+
Sbjct: 195 ARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAA 254
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+ G + +S+ + ++ + A+ L++A E +P + D+ +
Sbjct: 255 EADLLSGVQ-LHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRD-DLVTWN 312
Query: 605 AFLHGC 610
+ GC
Sbjct: 313 GMISGC 318
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 215/568 (37%), Positives = 329/568 (57%), Gaps = 25/568 (4%)
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDM 189
+ +K M E D++ FS V K+ LR + G ++H I+K G G + V LV
Sbjct: 29 IGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAF 88
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y K + + S+R+VFDE +++V+SW S+I GYV N A++GL +F +M +E + T+
Sbjct: 89 YLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATI 148
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
S+ CA R + G+ +H +K LLDMY KCG++ A++VF E+
Sbjct: 149 VSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 208
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VS+T+MI GY + G +A+KLF + + P+ T+ +VL+ A+ L+ G+ V
Sbjct: 209 RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV 268
Query: 370 HSLGIR---LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN- 425
H I+ LG D V NAL+DMYAKC + +A +F KD+I+WN+II G N
Sbjct: 269 HEW-IKENDLGF-DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNC 326
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
SPD T+ V+ ACASL A G +H Y + G S +V
Sbjct: 327 YANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR-HV 385
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+L++ YAKCG A M+FD + K+ V+W+ MI GYGM G G ++ALF+ M +
Sbjct: 386 ANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGI 445
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+ +E+ F ++L ACSH+G+V EGW+ F M + K P+++HY C+VD+LAR G L +A
Sbjct: 446 EADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAY 505
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
F+ENMPI PD +++GA L GC ++ L E + +K+ EL P+ YYVL++N+YA
Sbjct: 506 RFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAE 565
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W +V ++R+ + QRGL K+PGCS +++
Sbjct: 566 KWEQVKRLRKRIGQRGLRKNPGCSWIEI 593
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 220/434 (50%), Gaps = 29/434 (6%)
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FDE + + W ++ ++ + LF +M VE + T + + + LR++
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
H G+ LHG+ILK G + + +L+ Y+K + AR VFDE+ D++SW ++I GY
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR--LGLED 380
+G +K L +F + + TI SV + A +++GR VHS+G++ ED
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------D 423
N L+DMY+KC + A+ +F S++ V+++ S+I+G +
Sbjct: 181 -RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE 239
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ +SPD T+ +V++ CA + G +H + K+ L +++V AL++ YAKCG Q
Sbjct: 240 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDLGFDIFVSNALMDMYAKCGSMQ 298
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSAC 542
A +VF MR K+ ++W+ +IGGY +L+LF+ +L E+ P+E +L AC
Sbjct: 299 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 358
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIEPDVS 601
+ +G + + R+ F S +H +VD+ A+ G L A +++ + VS
Sbjct: 359 ASLSAFDKGREIHGYIMRNGYF--SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 416
Query: 602 ----LFGAFLHGCG 611
+ G +HG G
Sbjct: 417 WTVMIAGYGMHGFG 430
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 180/349 (51%), Gaps = 14/349 (4%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
CNT L+ MY G + A++VF M + S+ MI Y L + V+ ++ M +
Sbjct: 183 CNT-LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 241
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSS 199
D + + VL C R +DEG +VH E +K G D FV L+DMYAKC + +
Sbjct: 242 ISPDVYTVTAVLNCCARYRLLDEGKRVH-EWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN-RMREGFVEGNQITLGSLVTACAK 258
VF E K+++SW ++I GY +N A E L LFN + E ++ T+ ++ ACA
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L A +G+ +HGYI++ G + H+ +L+DMY KCG + A +FD++ S DLVSWT M
Sbjct: 361 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVM 420
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLG 373
I GY G+ +A+ LF + A + ++ S+L A + G ++ G M H
Sbjct: 421 IAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECK 480
Query: 374 IRLGLEDYTVINALVDMYAKC-HVIADARYIFETTSEKDVIAWNSIISG 421
I +E Y I VDM A+ +I R+I D W +++ G
Sbjct: 481 IEPTVEHYACI---VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 526
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 12/163 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H ++ +G +D+ LV MY G + A +FD + + D S+ VMI Y ++
Sbjct: 368 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 427
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG------MKVHCEIVKVGGP 178
K+ + + MR+ E D F +L AC +DEG M+ C+I P
Sbjct: 428 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI----EP 483
Query: 179 DSFVLTGLVDMYAKCRD-IGSSRQVFDETLDKNVVSWTSMIAG 220
+VDM A+ D I + R + + + + W +++ G
Sbjct: 484 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 526
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 229/647 (35%), Positives = 357/647 (55%), Gaps = 31/647 (4%)
Query: 55 LLGLCKSTGSLKA---FHALLI-VDGLTNDKCNTK--LVSMYGSFGHVKYARSVFDSMPN 108
+LG C + GSL+ HA +I + D + + LV+MYG G V+ AR VFD + N
Sbjct: 150 VLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKN 209
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D S+ MI Y N + ++ Y+ M + D+ F+ L AC +L D G +
Sbjct: 210 RDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAI 266
Query: 169 HCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
H IV FV + L++MYA+C D+ S+RQ F++ +K+VV WTS++ YVQ +
Sbjct: 267 HARIVSSNMESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYR 326
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TAL 287
E L L+ RM V + +T + + ACA L AL +GK +H + + G + S +V TAL
Sbjct: 327 EALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQ--SLVVHTAL 384
Query: 288 LDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L MY KCG + AR+VF+ + ++ WTAMI Y Q+G+ +AL+L+ PN
Sbjct: 385 LTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPN 444
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFE 405
T ++VL+A + G+L G +H L + V NALV MYAKC + A+ FE
Sbjct: 445 EYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFE 504
Query: 406 TTSEKDVIAWNSII----------SGLD-------DNVSPDAVTLVSVISACASLGAVQV 448
+ KD+++WN++I LD V PD VT+ S +SACA G++Q+
Sbjct: 505 ASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQL 564
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H+ K S++ V TAL+N Y +CG ++AR +F+ M +++ ++W+AM Y
Sbjct: 565 GREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYA 624
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
QG L L+ +M+ ++PNE+ FT+IL CSH G++ G +CF M + + VP
Sbjct: 625 QQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIR 684
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+H++CMVDLL R+GRL +A +E+MP +PD + L C +S D + +++ E
Sbjct: 685 EHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKE 744
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
L P+ Y L+S+++ + G +V+ MK+ GL K PG SL++
Sbjct: 745 LDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 283/567 (49%), Gaps = 31/567 (5%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
LL C GSL K H L+ G N L+ MYG+ G + AR+ F + +
Sbjct: 47 ELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASI 106
Query: 110 DFYS-FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ + M+ Y N L+ +E Y M + E D + VL +C + + E ++
Sbjct: 107 KAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREI 166
Query: 169 HCEIVKVGG--PDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
H I++ D+ L LV+MY KC + +R+VFD +++ VSWTSMI+ Y N
Sbjct: 167 HASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNG 226
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
E L L+ +M ++ + IT S + AC KL GK +H I+ +E + + +
Sbjct: 227 FCDEALDLYQQMDADGIQPDSITFTSALLACTKLV---DGKAIHARIVSSNME-SDFVGS 282
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL++MY +CG++ AR F+++ + +V WT+++ Y Q+ + +AL L+
Sbjct: 283 ALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHA 342
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFE 405
+ VT + L A A LG L G+ +HS G + V AL+ MYAKC + AR +F
Sbjct: 343 DGVTYVTALGACASLGALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAVFN 402
Query: 406 TTSEK-DVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQ 447
+K +V W ++IS + + P+ T +V++AC+S G ++
Sbjct: 403 RVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLE 462
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +H + + L+SNV V AL+ YAKCG + A+ F+A K+ V+W+AMIG Y
Sbjct: 463 AGMKIHGH-VENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAY 521
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G G +L L+ M ++ V P+EV + LSAC+ +G + G + + ++ F S
Sbjct: 522 AQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSS 581
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENM 594
+ +V++ R GRLE A E+M
Sbjct: 582 LMVQTALVNMYGRCGRLETARSMFEDM 608
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/573 (29%), Positives = 277/573 (48%), Gaps = 62/573 (10%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
++ ++L+ C L + EG VH +++ G G + F+ L+ MY C +I +R F
Sbjct: 44 LYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNF 103
Query: 207 LD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
K V + M++ Y +N L L++RM E E ++IT ++ +C+ + +L +
Sbjct: 104 ASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREA 163
Query: 266 KWLHGYILKIG--IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
+ +H I++ I N L AL++MY KCG++ +AR VFD + + D VSWT+MI Y
Sbjct: 164 REIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYA 223
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
+G+ D+AL L+ P+ +T S L A +L + G+ +H+ + +E V
Sbjct: 224 NNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMESDFV 280
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNV 426
+AL++MYA+C ++ AR FE K V+ W S+++ LD + V
Sbjct: 281 GSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGV 340
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VT V+ + ACASLGA++ G ++H+ + G S + V TALL YAKCG+ +AR
Sbjct: 341 HADGVTYVTALGACASLGALKEGKAIHSRVFECGFQS--LVVHTALLTMYAKCGELDAAR 398
Query: 487 MVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF+ +R+K N W+AMI Y G +L L+ M+ E +PNE F+ +L+ACS +
Sbjct: 399 AVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSS 458
Query: 546 GMVGEGWK---------------------CFYSMCRDFKFVPS---------MKHYVCMV 575
G + G K Y+ C + S + + M+
Sbjct: 459 GDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMI 518
Query: 576 DLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
A+ G EAL+ + M + PD + L C + LG + ++L+
Sbjct: 519 GAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSF 578
Query: 633 KACYYVLVS--NLYASDGRWIRVNQVRELMKQR 663
++ V + N+Y GR + E M QR
Sbjct: 579 RSSLMVQTALVNMYGRCGRLETARSMFEDMGQR 611
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 213/448 (47%), Gaps = 69/448 (15%)
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L ++ R G+VE L+ C +L +L +GK +H ++L+ G N L L+
Sbjct: 29 DALEQLDQRRHGYVE----LYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLI 84
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVS-WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
MY CG I AR+ F SI V+ + M+ Y ++G ++AL+L+ P+
Sbjct: 85 QMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDK 144
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGI---RLGLEDYTVINALVDMYAKCHVIADARYIF 404
+T VL + + +G+L R +H+ I ++ ++ ++ NALV+MY KC + +AR +F
Sbjct: 145 ITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVF 204
Query: 405 ETTSEKDVIAWNSIIS----------GLD-------DNVSPDAVTLVSVISACASLGAVQ 447
+ +D ++W S+IS LD D + PD++T S + AC L
Sbjct: 205 DGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD-- 262
Query: 448 VGSSLHAYSTKQGLLSSNV---YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
G ++HA ++SSN+ +VG+AL+N YA+CGD SAR F+ ++ K+ V W++++
Sbjct: 263 -GKAIHAR-----IVSSNMESDFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLM 316
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG-------WKC--- 554
Y +L L+ M +E V + V + T L AC+ G + EG ++C
Sbjct: 317 TAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQ 376
Query: 555 ----------FYSMCRD-------FKFVPSMKHYVC---MVDLLARAGRLEEALEFMENM 594
Y+ C + F V ++ C M+ A+AG +EALE + M
Sbjct: 377 SLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQM 436
Query: 595 PIE---PDVSLFGAFLHGCGLYSRFDLG 619
E P+ F L C + G
Sbjct: 437 VAEGTRPNEYTFSNVLAACSSSGDLEAG 464
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/649 (33%), Positives = 352/649 (54%), Gaps = 26/649 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
LN +S KA H +I G + + L Y GH+ YAR +F+ MP
Sbjct: 22 LNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLL 81
Query: 113 SFQVMIRWYFLNDLYKDIVE-FYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ ++IR Y LY D + F + + + +K D + + V KA EL+ + G+ VH
Sbjct: 82 SYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHG 141
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
I++ G D +V L+ MY + +R VFD +++V+SW +MI+GY +N +
Sbjct: 142 RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMND 201
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L++F+ M V+ + T+ S++ C L+ L G+ +H + + + + AL++
Sbjct: 202 ALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY+KCG + +AR VFD + D+++WT MI GYT+ G + AL+L ++ PN VT
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTS 408
IAS++S +N G+ +H +R + D + +L+ MYAKC + +F S
Sbjct: 322 IASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+ W++II+G N V P+ TL S++ A A+L ++ +
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK----NTVTWSAMIGGY 507
+H Y TK G +SS + T L++ Y+KCG +SA +F+ ++EK + V W A+I GY
Sbjct: 442 IHCYLTKTGFMSS-LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GM GDG +L +F +M+ V PNE+ FT+ L+ACSH+G+V EG F M +K +
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLAR 560
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
HY C+VDLL RAGRL+EA + +P EP +++GA L C + LGE+ K+
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLF 620
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
EL P+ YVL++N+YA+ GRW + +VR +M+ GL K PG S +++
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 238/489 (48%), Gaps = 27/489 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ +L + I + +HC ++ G +L+ L YA C I +R++F+E
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--GNQITLGSLVTACAKLRALHQGK 266
+++S+ +I YV+ + + +F RM V+ + T + A +L+++ G
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG IL+ + ++ ALL MY+ G + AR VFD + + D++SW MI GY ++G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL--GIRLGLEDYTVI 384
Y + AL +F +H TI S+L L +L MGR VH L RLG + V
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG-DKIEVK 256
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
NALV+MY KC + +AR++F+ +DVI W +I+G ++ V
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+AVT+ S++S C V G LH ++ +Q + S++ + T+L++ YAKC
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY-SDIIIETSLISMYAKCKRVDLCFR 375
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF + +T WSA+I G +L LF M E+V+PN ++L A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE---PDVSLFG 604
+ + + + F+ S+ +V + ++ G LE A + + + DV L+G
Sbjct: 436 LRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 605 AFLHGCGLY 613
A + G G++
Sbjct: 495 ALISGYGMH 503
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/591 (36%), Positives = 331/591 (56%), Gaps = 24/591 (4%)
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
N +SF +I Y N+ D + Y MR E DNFV VLKACC + G +
Sbjct: 88 NAAIHSF--LITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQE 145
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
VH +VK G D FV L+ MY++ + +R +FD+ +K+VVSW++MI Y ++
Sbjct: 146 VHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGL 205
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI--EINSHLV 284
E L L M V+ ++I + S+ A+L L GK +H Y+++ G + L
Sbjct: 206 LDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLC 265
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
TAL+DMYVKC N+ AR VFD L ++SWTAMI Y ++ ++LF F
Sbjct: 266 TALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMF 325
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYI 403
PN +T+ S++ G L +G+++H+ +R G V+ A +DMY KC + AR +
Sbjct: 326 PNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSV 385
Query: 404 FETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAV 446
F++ KD++ W+++IS N + P+ T+VS++ CA G++
Sbjct: 386 FDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSL 445
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++G +H+Y KQG+ ++ + T+ ++ YA CGD +A +F +++ W+AMI G
Sbjct: 446 EMGKWIHSYIDKQGI-KGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISG 504
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
+ M G G +L LF +M V PN++ F L ACSH+G++ EG + F+ M +F F P
Sbjct: 505 FAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTP 564
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++HY CMVDLL RAG L+EA E +++MP+ P++++FG+FL C L+ LGE K+
Sbjct: 565 KVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQF 624
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
L L P K+ Y VL+SN+YAS RW V +R MK G+ K PG S ++++
Sbjct: 625 LSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVN 675
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 176/638 (27%), Positives = 284/638 (44%), Gaps = 91/638 (14%)
Query: 69 HALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H ++ +G D CN L+ MY G + AR +FD + N D S+ MIR Y + L
Sbjct: 147 HGFVVKNGFHGDVFVCNA-LIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGL 205
Query: 127 YKDIVEFYKCMR-KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV---KVGGPDSFV 182
+ ++ + M R+K + + S + EL D+ G +H ++ K G +
Sbjct: 206 LDEALDLLRDMHVMRVKPSEIGMIS-ITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPL 264
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+DMY KC ++ +R+VFD +++SWT+MIA Y+ + EG+ LF +M +
Sbjct: 265 CTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGM 324
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N+IT+ SLV C AL GK LH + L+ G ++ L TA +DMY KCG++R ARS
Sbjct: 325 FPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARS 384
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VFD S DL+ W+AMI Y Q+ D+A +F PN T+ S+L A+ G+
Sbjct: 385 VFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGS 444
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L MG+ +HS + G++ D + + VDMYA C I A +F +++D+ WN++ISG
Sbjct: 445 LEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISG 504
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ V+P+ +T + + AC+ G +Q G L + +
Sbjct: 505 FAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTP 564
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V +++ + G A + +M
Sbjct: 565 KVEHYGCMVDLLGRAGLLDEAHELIKSM-------------------------------- 592
Query: 525 NEEVQPNEVIFTTILSACS-HTGMVGEGW--KCFYSMCRDFKFVPSMKHY-VCMVDLLAR 580
++PN +F + L+AC H + W K F S+ P Y V M ++ A
Sbjct: 593 --PMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSL------EPHKSGYNVLMSNIYAS 644
Query: 581 AGRLEEALEFMENMPIEPDVSLFG-AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
A R + M E V G + + GL F +G+ HPD Y +
Sbjct: 645 ANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGD-------REHPDAKKVYEM 697
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
++++RE ++ G + C L ++D
Sbjct: 698 -------------IDEMREKLEDAGYTPDVSCVLHNID 722
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 223/445 (50%), Gaps = 23/445 (5%)
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E+ N + +I Y++N+C + ++ MR E + + S++ AC + +
Sbjct: 83 ESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLL 142
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HG+++K G + + AL+ MY + G++ AR +FD++ + D+VSW+ MI Y +
Sbjct: 143 GQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDR 202
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR---LGLEDY 381
SG D+AL L D P+ + + S+ A+L +L +G+ +H+ +R G
Sbjct: 203 SGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGV 262
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDD 424
+ AL+DMY KC +A AR +F+ S+ +I+W ++I+ L +
Sbjct: 263 PLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGE 322
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P+ +T++S++ C + GA+++G LHA++ + G S V + TA ++ Y KCGD +S
Sbjct: 323 GMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLV-LATAFIDMYGKCGDVRS 381
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR VFD+ + K+ + WSAMI Y + +F M ++PNE ++L C+
Sbjct: 382 ARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAK 441
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G + G K +S M VD+ A G ++ A + D+S++
Sbjct: 442 AGSLEMG-KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAE-ATDRDISMWN 499
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLEL 629
A + G ++ + + ++M L
Sbjct: 500 AMISGFAMHGHGEAALELFEEMEAL 524
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/626 (35%), Positives = 357/626 (57%), Gaps = 27/626 (4%)
Query: 77 LTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPN--PDFYSFQVMIRWYFLNDLYKDIVEF 133
LTN D KLV +Y + +K AR VFD MP+ + + ++IR Y N Y++ ++
Sbjct: 47 LTNFDVPFEKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDL 106
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
Y M + F F VLKAC L++ EG ++HC+I ++ + +V T LVD YAK
Sbjct: 107 YYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAK 166
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
C + +++VFD+ ++VV+W SMI+G+ ++ + + + + V N T+ +
Sbjct: 167 CGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGV 226
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-D 311
+ A A++ +L GK +HG+ ++ G + + T +LD+Y KC I AR +FD + + +
Sbjct: 227 LPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKN 286
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDK---KWADFFPNHVTIASVLSASAQLGNLNMGRM 368
V+W+AM+ Y + +AL+LF K + VT+A+V+ A L +L+ G
Sbjct: 287 EVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTC 346
Query: 369 VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-- 425
+H I+ G D V N L+ MYAKC +I A F +D +++ +IISG N
Sbjct: 347 LHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGN 406
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
++P+ TL SV+ ACA L + GS H Y+ G +++ +
Sbjct: 407 SEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGF-TADTMICN 465
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
AL++ YAKCG +AR VFD M ++ V+W+ MI YG+ G G +L LF +M +E ++P
Sbjct: 466 ALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKP 525
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
++V F ++SACSH+G+V EG F +M +DF +P M+HY CMVDLL+RAG +E F
Sbjct: 526 DDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSF 585
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
+E MP+EPDV ++GA L C +Y +LGE + KK+ +L P+ +VL+SN+Y++ GRW
Sbjct: 586 IEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRW 645
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDL 676
QVR K++G KSPGCS +++
Sbjct: 646 DDAAQVRFTQKEQGFEKSPGCSWIEI 671
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/628 (34%), Positives = 351/628 (55%), Gaps = 59/628 (9%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L LC + SL K H+++ + + D+ KLVS+Y + G +K R VFD+M
Sbjct: 104 SVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKK 163
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ Y + M+ Y +K+ + +K M +++G
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIM------------------------VEKG---- 195
Query: 170 CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
++ P+S + ++FD+ D++V+SW SMI+GYV N +
Sbjct: 196 ---IEGKRPES------------------ASELFDKLCDRDVISWNSMISGYVSNGLTER 234
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
GL ++ +M ++ + T+ S++ CA L GK +H +K E + LLD
Sbjct: 235 GLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLD 294
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG++ A VF+++ ++VSWT+MI GYT+ G D A++L + + V
Sbjct: 295 MYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVA 354
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
S+L A A+ G+L+ G+ VH +E + V NAL+DMY KC + A +F T
Sbjct: 355 TTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMV 414
Query: 409 EKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
KD+I+WN++I L PD+ T+ ++ ACASL A++ G +H Y + G SS+ +V
Sbjct: 415 VKDIISWNTMIGEL----KPDSRTMACILPACASLSALERGKEIHGYILRNGY-SSDRHV 469
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
AL++ Y KCG AR++FD + K+ V+W+ MI GYGM G G ++A F++M + +
Sbjct: 470 ANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGI 529
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+P+EV F +IL ACSH+G++ +GW+ FY M DF P ++HY CMVDLL+R G L +A
Sbjct: 530 EPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAY 589
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF+E +PI PD +++GA L GC +Y +L E + +++ EL P+ YYVL++N+YA
Sbjct: 590 EFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAE 649
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W V ++RE + ++GL K+PGCS +++
Sbjct: 650 KWEEVKRMREKIGKKGLRKNPGCSWIEI 677
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 214/512 (41%), Gaps = 102/512 (19%)
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
T+D+ V + + I + Q + + L ++ +E T S++ CA ++L G
Sbjct: 61 TIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDG 118
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV---------------------- 303
K +H I + ++ L L+ +Y CG++++ R V
Sbjct: 119 KKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178
Query: 304 -----------------------------FDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
FD+LC D++SW +MI GY +G ++ L++
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEI 238
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
+ + + TI SVL A G L++G+ VHSL I+ E N L+DMY+K
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSK 298
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
C + A +FE E++V++W S+I+G + V D V S+
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSI 358
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ ACA G++ G +H Y K + SN++V AL++ Y KCG A VF M K+
Sbjct: 359 LHACARSGSLDNGKDVHDY-IKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD 417
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
++W+ MIG E++P+ IL AC+ + G +
Sbjct: 418 IISWNTMIG---------------------ELKPDSRTMACILPACASLSALERGKEIHG 456
Query: 557 SMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+ R+ S +H +VDL + G L A + +P D+ + + G G++
Sbjct: 457 YILRN--GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMISGYGMHGY 513
Query: 616 FDLGEVMIKKMLE--LHPDKACYYVLVSNLYA 645
+ +M + + PD+ + +S LYA
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSF---ISILYA 542
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 226/614 (36%), Positives = 354/614 (57%), Gaps = 19/614 (3%)
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+ ++SM FG +A VF MP D +S+ VM+ Y L ++ ++ Y M
Sbjct: 130 RLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWA 189
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSS 199
D + F VL++C + D G +VH +++ G + VL L+ MYAKC D+ ++
Sbjct: 190 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAA 249
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R+VFD + +SW +MIAG+ +N GL LF M + V+ N +T+ S+ A L
Sbjct: 250 RKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLL 309
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ K +HG +K G + +L+ MY G + AR+VF + + D +SWTAMI
Sbjct: 310 SDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMI 369
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY ++G+PDKAL+++ + + P+ +TIAS L+A A LG+L++G +H L G
Sbjct: 370 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFM 429
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y V+ NAL++MYAK I A +F+ EKDV++W+S+I+G N
Sbjct: 430 SYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM 489
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V P++VT ++ ++ACA+ GA++ G +HA+ + G+ Y+ AL++ Y KCG
Sbjct: 490 LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEG-YLPNALIDLYVKCGQT 548
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A F A K+ V+W+ MI G+ G+G +L+ F+ M+ P+EV F +L AC
Sbjct: 549 GYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVALLCAC 608
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S GMV EGW+ F+SM + VP++KHY CMVDLL+R G+L EA F+ MPI PD ++
Sbjct: 609 SRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAV 668
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L+GC ++ +LGE+ K +LEL P+ A Y+VL+ +LYA G W ++ +VR+ M++
Sbjct: 669 WGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMRE 728
Query: 663 RGLSKSPGCSLVDL 676
+GL GCS V++
Sbjct: 729 KGLDHDSGCSWVEV 742
>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 670
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 222/650 (34%), Positives = 367/650 (56%), Gaps = 33/650 (5%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDKCNT-KLVSMYGS---FGHVKYARSVFDSMPNPDF 111
L C S +L H L+ L +D C +LV++ S + YAR VFD M P
Sbjct: 25 LDACASRANLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARKVFDRMAQPTA 84
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLK---ACCELRDIDEGMKV 168
+ MIR Y D +E ++ MR+ DN+ + V + A + G V
Sbjct: 85 IVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAV 144
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H + ++G D FV++GL++ Y + + +R+VF+E +++VVSWT MI+ + Q C
Sbjct: 145 HALVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQ--CG 202
Query: 228 QEGLVL--FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
Q VL + M+ + N+IT+ SL++AC ++RA+ +G W++ + + GIE + +
Sbjct: 203 QWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARVDEYGIEADVDIRN 262
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+ MYVKCG + DA F + + SW +I G+ Q+G +AL +F + P
Sbjct: 263 ALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVIP 322
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
+ +T+ SVLS AQLG+L GR +H+ + D + N+L++MYAKC +A A IF
Sbjct: 323 DVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEIIF 382
Query: 405 ETTSEKDVIAWNSIISG-------------LDD----NVSPDAVTLVSVISACASLGAVQ 447
E + +D+++W +++ G DD +V + LVS++SAC+ LGA+
Sbjct: 383 ENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALD 442
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +H+Y K+ + +++++ +AL++ YAKCG +A +F MR K T+ W+AMIGG
Sbjct: 443 KGREIHSY-IKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGL 501
Query: 508 GMQGDGGGSLALFSDMLN-EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
QG G ++ALF +L + +P+ + +L AC+H GMV EG ++++ VP
Sbjct: 502 ASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLH-YFNLMLTLGIVP 560
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
+HY C+VDLL RAG L+EA F++ MPI+P+ ++G+ L C ++ R +LG+++ + +
Sbjct: 561 DNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHI 620
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++L P+ +VL+SNL+A +G+W V QVR +M R + KSPG S + +
Sbjct: 621 IDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/628 (35%), Positives = 343/628 (54%), Gaps = 30/628 (4%)
Query: 73 IVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE 132
+ G+ + +KLV MY G + AR VFD+M + V + W + Y + E
Sbjct: 343 VQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKG----NVHV-WNLIMGGYAKVGE 397
Query: 133 FYKCMRKRLKEH------DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
F + + ++ H D S +LK L +G+ H IVK+G G V
Sbjct: 398 FEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNA 457
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ YAK IG + VF+ ++ +SW S+I+G N E + LF RM E +
Sbjct: 458 LISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELD 517
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+TL S++ ACA+ R G+ +HGY +K G+ + L ALLDMY C + + +F
Sbjct: 518 SVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFR 577
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ ++VSWTAMI Y ++G DK L + P+ + S L A A +L
Sbjct: 578 SMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQ 637
Query: 366 GRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
G+ VH IR G+E V NAL++MY KC + +AR IF+ + KDVI+WN++I G
Sbjct: 638 GKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSR 697
Query: 425 N----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
N P+AVT+ ++ A AS+ +++ G +HAY+ ++G L + Y
Sbjct: 698 NNFPNESFSLFSDMLLQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDS-YA 756
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
AL++ Y KCG AR++FD + +KN ++W+ MI GYGM G G ++ALF M +
Sbjct: 757 SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGI 816
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+P+ F+ IL AC H+G+ EG + F +M +++K P +KHY C+VDLL+R G L+EAL
Sbjct: 817 EPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEAL 876
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF+E+MPIEPD S++ + LHGC ++ L E + K+ +L P+ YYVL++N+YA
Sbjct: 877 EFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAE 936
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
RW V +++ + RGL ++ G S +++
Sbjct: 937 RWEAVKKLKNKIGGRGLRENTGYSWIEV 964
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 244/526 (46%), Gaps = 38/526 (7%)
Query: 53 LNLLGLCKSTGSLKAFHALL-----IVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
+ L G +S + K HAL+ G +LV Y G + AR+VFD MP
Sbjct: 104 VQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDGMP 163
Query: 108 --NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
D + ++ Y +++ V ++ M+ D S VLK L + EG
Sbjct: 164 PQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEG 223
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H + K+G G V L+ +Y++C + + +VFD ++ +SW SMI G N
Sbjct: 224 EVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSN 283
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI----- 279
+ LF++M E + +T+ S++ ACA L GK +HGY +K G+
Sbjct: 284 GWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSV 343
Query: 280 -----NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS-WTAMIVGYTQSGYPDKALK 333
++ L + L+ MYVKCG++ AR VFD + S V W ++ GY + G +++L
Sbjct: 344 QSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLS 403
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYA 392
LF P+ I+ +L L G + H ++LG V NAL+ YA
Sbjct: 404 LFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYA 463
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVS 435
K ++I DA +F +D I+WNS+ISG N D+VTL+S
Sbjct: 464 KSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLS 523
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V+ ACA G +H YS K GL+ + ALL+ Y+ C D QS +F +M +K
Sbjct: 524 VLPACAQSRYWFAGRVVHGYSVKTGLI-GETSLANALLDMYSNCSDWQSTNQIFRSMGQK 582
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
N V+W+AMI Y G L +M+ + ++P+ T+ L A
Sbjct: 583 NVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHA 628
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 239/530 (45%), Gaps = 72/530 (13%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEI-----VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ V++ C E R ++ + H I GG S + LV Y KC D+G +R VF
Sbjct: 100 YCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVF 159
Query: 204 DETLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
D + +V WTS+++ Y + QE + LF +M+ V + + ++ + L +
Sbjct: 160 DGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGS 219
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +G+ +HG + K+G+ + AL+ +Y +CG + DA VFD + D +SW +MI G
Sbjct: 220 LTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGG 279
Query: 322 YTQSGYPDKALKLFTDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-- 378
+G+ A+ LF+ K W+ + VT+ SVL A A LG +G+ VH ++ GL
Sbjct: 280 CFSNGWHGTAVDLFS-KMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLW 338
Query: 379 ---------EDYTVINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISGL------ 422
+D + + LV MY KC +A AR +F+ S K +V WN I+ G
Sbjct: 339 GLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEF 398
Query: 423 -----------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+ ++PD + ++ L + G H Y K G + V A
Sbjct: 399 EESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLG-FGAQCAVCNA 457
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++FYAK A +VF+ M ++T++W+++I G G ++ LF M + + +
Sbjct: 458 LISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELD 517
Query: 532 EVIFTTILSACSH----------------TGMVGEGWKC-----FYSMCRDF----KFVP 566
V ++L AC+ TG++GE YS C D+ +
Sbjct: 518 SVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFR 577
Query: 567 SMKH-----YVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLH 608
SM + M+ RAG ++ ++ M I PDV + LH
Sbjct: 578 SMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALH 627
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 225/652 (34%), Positives = 350/652 (53%), Gaps = 30/652 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
+ LL C S S+ H+ + GL +D TKL +Y + + +A +F P+
Sbjct: 143 VKLLETCCSKLSISQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTV 202
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRK----RLKEH-DNFVFSKVLKACCELRDIDEGM 166
Y + ++R Y + + + ++ M ++E DN+ S LK+C LR + G
Sbjct: 203 YLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGK 262
Query: 167 KVH--CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H + V++ G D FV + L+D+Y KC + + +VF E +VV WTS+I+GY Q+
Sbjct: 263 VIHGFLKKVRIDG-DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQS 321
Query: 225 DCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ L F+RM V + +TL S+ +ACA+L G+ +HG++ + G++ L
Sbjct: 322 GSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCL 381
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
+LL +Y K G+I++A ++F E+ D++SW+ M+ Y +G L LF +
Sbjct: 382 ANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRI 441
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
PN VT+ SVL A A + NL G +H L + G E + TV AL+DMY KC A
Sbjct: 442 KPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVD 501
Query: 403 IFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGA 445
+F +KDVIAW + SG DN PDA+ LV +++ + LG
Sbjct: 502 LFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGI 561
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+Q LHA+ K G +N ++G +L+ YAKC + A VF M K+ VTWS++I
Sbjct: 562 LQQAVCLHAFVIKNGF-ENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIA 620
Query: 506 GYGMQGDGGGSLALFSDMLNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
YG G G +L LF M N + +PN V F +ILSACSH+G++ EG F M +K
Sbjct: 621 AYGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKL 680
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
P+ +HY MVDLL R G L+ AL+ + NMP++ ++GA L C ++ +GEV K
Sbjct: 681 KPNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAK 740
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ L P+ A YY+L+SN+Y+ D W ++R L+K++ L+K G S+V+L
Sbjct: 741 NLFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVEL 792
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 340/617 (55%), Gaps = 20/617 (3%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
++ +KLV MY G + AR VFD+MP+ + + + +++ Y +++ + ++ M
Sbjct: 342 DEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQM 401
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
+ D S +LK L +G+ H +VK+G G V L+ YAK I
Sbjct: 402 HELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMI 461
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
++ VFD ++ +SW S+I+G N E + LF RM E + TL S++ AC
Sbjct: 462 DNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPAC 521
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A+ G+ +HGY +K G+ + L ALLDMY C + +F + ++VSWT
Sbjct: 522 ARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWT 581
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
AMI YT++G DK L + P+ + SVL A +L G+ VH IR
Sbjct: 582 AMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRN 641
Query: 377 GLEDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
G+E V NAL++MY C + +AR +F+ + KD+I+WN++I G N
Sbjct: 642 GMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLF 701
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
P+ VT+ ++ A AS+ +++ G +HAY+ ++G L + Y AL++ Y KC
Sbjct: 702 SDMLLQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDS-YTSNALVDMYVKC 760
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G AR++FD + +KN ++W+ MI GYGM G G ++ALF M V+P+ F+ IL
Sbjct: 761 GALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAIL 820
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
AC H+G+ EGWK F +M +++K P +KHY C+VDLL+ G L+EA EF+E+MPIEPD
Sbjct: 821 YACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPD 880
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
S++ + LHGC ++ L E + ++ +L P+ YYVL++N+YA RW V +++
Sbjct: 881 SSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNK 940
Query: 660 MKQRGLSKSPGCSLVDL 676
+ RGL ++ GCS +++
Sbjct: 941 IGGRGLRENTGCSWIEV 957
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 178/598 (29%), Positives = 280/598 (46%), Gaps = 44/598 (7%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCN--TKLVSMYGSFGHVKYARSVFDSMP 107
+ C+ LG S + H LL GL + C L+++Y G ++ A VFDSM
Sbjct: 205 LKCIASLG---SITEGEVIHGLLEKLGL-GEACAVANALIALYSRCGCMEDAMQVFDSMH 260
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
D S+ I YF N + V+ + M E + VL AC EL G
Sbjct: 261 ARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKV 320
Query: 168 VHCEIVKVG----------GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-NVVSWTS 216
VH +K G G D + + LV MY KC D+GS+R+VFD K NV W
Sbjct: 321 VHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNL 380
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
++ GY + +E L+LF +M E + ++ L L+ L G HGY++K+G
Sbjct: 381 IMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLG 440
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+ AL+ Y K I +A VFD + D +SW ++I G T +G +A++LF
Sbjct: 441 FGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFV 500
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCH 395
+ T+ SVL A A+ +GR+VH ++ GL + ++ NAL+DMY+ C
Sbjct: 501 RMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCS 560
Query: 396 VIADARYIFETTSEKDVIAWNSIIS-----GLDDNVS------------PDAVTLVSVIS 438
IF ++K+V++W ++I+ GL D V+ PD + SV+
Sbjct: 561 DWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLH 620
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
A +++ G S+H Y+ + G + + V AL+ Y C + + AR+VFD + K+ +
Sbjct: 621 GFAGDESLKQGKSVHGYAIRNG-MEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDII 679
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YS 557
+W+ +IGGY S +LFSDML + +PN V T IL A + + G + Y+
Sbjct: 680 SWNTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGREIHAYA 738
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP----IEPDVSLFGAFLHGCG 611
+ R F+ +VD+ + G L A + + I + + G +HGCG
Sbjct: 739 LRRG--FLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCG 794
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 244/518 (47%), Gaps = 37/518 (7%)
Query: 58 LCKSTGSLKAF---HALLI--VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPN--PD 110
LC SL+A HAL+ G+ +LV Y G + AR VFD MP D
Sbjct: 103 LCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVAD 162
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ ++ Y +++ V ++ M+ D S VLK L I EG +H
Sbjct: 163 VRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHG 222
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+ K+G G V L+ +Y++C + + QVFD ++ +SW S I+GY N
Sbjct: 223 LLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDR 282
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI---------EIN 280
+ LF++M E + +T+ S++ ACA+L GK +HGY +K G+ I+
Sbjct: 283 AVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGID 342
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS-WTAMIVGYTQSGYPDKALKLFTDKK 339
L + L+ MYVKCG++ AR VFD + S V W ++ GY ++ +++L LF
Sbjct: 343 EALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMH 402
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIA 398
P+ ++ +L L G + H ++LG V NAL+ YAK ++I
Sbjct: 403 ELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMID 462
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDNV-----------------SPDAVTLVSVISACA 441
+A +F+ +D I+WNS+ISG N D+ TL+SV+ ACA
Sbjct: 463 NAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACA 522
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
VG +H YS K GL+ + ALL+ Y+ C D S +F M +KN V+W+
Sbjct: 523 RSHYWFVGRVVHGYSVKTGLI-GETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWT 581
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
AMI Y G L +M+ + ++P+ T++L
Sbjct: 582 AMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVL 619
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 245/527 (46%), Gaps = 68/527 (12%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEI-VKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDET 206
+ V++ C E R ++ + H + GG VL LV Y KC D+G +R VFDE
Sbjct: 97 YCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEM 156
Query: 207 LDK--NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +V WTS+++ Y + QEG+ LF +M+ V + + ++ A L ++ +
Sbjct: 157 PPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITE 216
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HG + K+G+ + AL+ +Y +CG + DA VFD + + D +SW + I GY
Sbjct: 217 GEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFS 276
Query: 325 SGYPDKALKLFTDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE---- 379
+G+ D+A+ LF+ K W++ + VT+ SVL A A+LG +G++VH ++ GL
Sbjct: 277 NGWHDRAVDLFS-KMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLE 335
Query: 380 ------DYTVINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISGL---------- 422
D + + LV MY KC + AR +F+ K +V WN I+ G
Sbjct: 336 SVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESL 395
Query: 423 -------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ ++PD L ++ L + G H Y K G + V AL++F
Sbjct: 396 LLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLG-FGTQCAVCNALISF 454
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
YAK +A +VFD M ++T++W+++I G G ++ LF M + + +
Sbjct: 455 YAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTL 514
Query: 536 TTILSACSH----------------TGMVGEGWKC-----FYSMCRDFKFV--------- 565
++L AC+ TG++GE YS C D+
Sbjct: 515 LSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQ 574
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHG 609
++ + M+ RAG ++ ++ M I+PDV + LHG
Sbjct: 575 KNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHG 621
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/614 (35%), Positives = 343/614 (55%), Gaps = 22/614 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L+ +Y G ++ AR FD M + D + VMI Y ++ +K M +
Sbjct: 49 SSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAK 108
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQ 201
D+ F+ VL C ++ G ++H +V+ G D L G LV +Y+K R +G +R+
Sbjct: 109 PDSVTFACVLSISCSEAMVEYGRQLHGLVVR-SGLDFVPLVGNTLVTVYSKGRQLGDARK 167
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FD ++V W MI GYVQN + +LFN M ++ + IT S + + A+ +
Sbjct: 168 LFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSS 227
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L Q K +HGYI++ G+ ++ +L +AL+D+Y KC + A +F+ D+V +TAMI G
Sbjct: 228 LKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISG 287
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Y +G AL++F PN +T +S+L A A L + +GR +H I+ LE+
Sbjct: 288 YVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEK 347
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP------------ 428
+ +A+++MYAKC + A IF S KD I WNSII+ + P
Sbjct: 348 CPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGM 407
Query: 429 -----DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
D VT+ + +SACA++ A+ G +H + K G S+++ +AL+N YAKCG
Sbjct: 408 EGVKYDCVTVSAALSACANIPALHYGKEIHGFMIK-GAFESDLFDMSALINMYAKCGKLN 466
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR+VF+ M+EKN V W+++I YG G SLALF +ML E +QP+ + F TILS+C
Sbjct: 467 IARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCG 526
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G V +G + F M ++ M+HY CM DL RAG L+EA E + +MP P S++
Sbjct: 527 HAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVW 586
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
G L C ++ +L EV + +L+L P + YY+L++++ A G+W V++++ LMK+R
Sbjct: 587 GTLLGACRVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKER 646
Query: 664 GLSKSPGCSLVDLD 677
G+ K PGCS ++++
Sbjct: 647 GVQKVPGCSWIEVN 660
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 141/519 (27%), Positives = 253/519 (48%), Gaps = 24/519 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D + F V+K C L ++ G + I+++G D FV + L+ +YA I +R+ F
Sbjct: 9 DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFF 68
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D+ +DK+ V W MI GYVQ + + LF M + + +T +++ +
Sbjct: 69 DKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVE 128
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ LHG +++ G++ + L+ +Y K + DAR +FD + IDLV W MI GY
Sbjct: 129 YGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYV 188
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYT 382
Q+G+ D A LF + A P+ +T S L + A+ +L + +H +R G + D
Sbjct: 189 QNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVY 248
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ +AL+D+Y KC A +F +++ D++ + ++ISG L
Sbjct: 249 LNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKK 308
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ P+A+T S++ ACA L A+++G LH Y K L VG+A++N YAKCG A
Sbjct: 309 MIPNALTFSSILPACAGLAAIKLGRELHGYIIKNE-LEEKCPVGSAIMNMYAKCGRLDLA 367
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
++F + K+ + W+++I + G ++ LF M E V+ + V + LSAC++
Sbjct: 368 HLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANI 427
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
+ G + M + F + ++++ A+ G+L A + N+ E + + +
Sbjct: 428 PALHYGKEIHGFMIKG-AFESDLFDMSALINMYAKCGKLNIA-RLVFNLMQEKNEVAWNS 485
Query: 606 FLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSN 642
+ G + + MLE + PD + ++S+
Sbjct: 486 IIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSS 524
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 209/465 (44%), Gaps = 37/465 (7%)
Query: 40 TFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKY 98
TF SF LPS L S +K H ++ G+ D N+ L+ +Y
Sbjct: 214 TFTSF--LPS------LAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVM 265
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A +F+ D + MI Y LN + KD +E ++ + ++ + FS +L AC
Sbjct: 266 ACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAG 325
Query: 159 LRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
L I G ++H I+K + V + +++MYAKC + + +F K+ + W S+
Sbjct: 326 LAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSI 385
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
I + Q+ +E + LF +M V+ + +T+ + ++ACA + ALH GK +HG+++K
Sbjct: 386 ITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAF 445
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
E + ++AL++MY KCG + AR VF+ + + V+W ++I Y GY +L LF +
Sbjct: 446 ESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHN 505
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYA 392
P+H+T ++LS+ G + G M GI +E Y + D++
Sbjct: 506 MLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYA---CMADLFG 562
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
+ + +A FE + P A +++ AC G V++
Sbjct: 563 RAGHLDEA---FEVITSMP--------------FPPAASVWGTLLGACRVHGNVELAEVA 605
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
Y +S Y+ L + A G +S + M+E+
Sbjct: 606 SRYLLDLEPKNSGYYL--LLTHVLADAGKWRSVHKIQHLMKERGV 648
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/645 (33%), Positives = 360/645 (55%), Gaps = 23/645 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L LC SL K H+++ +G+ D+ KLV MY + G + R +FD + N
Sbjct: 62 SVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILND 121
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ + +++ Y Y++ V ++ M++ D++ F+ VLK + E +VH
Sbjct: 122 KIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVH 181
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
++K+G G + V+ L+ Y KC ++ S+R +FDE D++VVSW SMI+G N ++
Sbjct: 182 GYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSR 241
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
GL F +M V+ + TL +++ ACA + L G+ LH Y +K G LL
Sbjct: 242 NGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMFNNTLL 301
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KCGN+ A VF ++ +VSWT++I + + G +A+ LF + + P+
Sbjct: 302 DMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIY 361
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
+ SV+ A A +L+ GR VH+ + + + V NAL++MYAKC + +A IF
Sbjct: 362 AVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQL 421
Query: 408 SEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLGAVQVGSS 451
K++++WN++I G N + PD VT+ V+ ACA L A++ G
Sbjct: 422 PVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQLKPDDVTMACVLPACAGLAALEKGRE 481
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+H + ++G S +++V AL++ Y KCG A+ +FD + +K+ + W+ MI GYGM G
Sbjct: 482 IHGHILRKGYFS-DLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHG 540
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G +++ F M ++P E FT+IL AC+H+G++ EGWK F SM + P ++HY
Sbjct: 541 FGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHY 600
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CMVDLL R+G L A +F+E MPI+PD +++GA L GC ++ +L E + + + EL P
Sbjct: 601 ACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEP 660
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ YYVL++N+YA +W V +++ + + GL GCS +++
Sbjct: 661 ENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEV 705
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 151/496 (30%), Positives = 254/496 (51%), Gaps = 25/496 (5%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
R + E + + VL+ C EL+ +++G +VH I G D + LV MY C D+
Sbjct: 49 RSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDL 108
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
R++FD L+ + W +++ Y + +E + LF +M+E + G+ T ++
Sbjct: 109 VKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGF 168
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A + + K +HGY+LK+G + +V +L+ Y KCG + AR +FDEL D+VSW
Sbjct: 169 AASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWN 228
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+MI G T +G+ L+ F + T+ +VL A A +GNL +GR +H+ G++
Sbjct: 229 SMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKA 288
Query: 377 GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS------------GLD 423
G + N L+DMY+KC + A +F E +++W SII+ GL
Sbjct: 289 GFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLF 348
Query: 424 DNVS-----PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
D + PD + SV+ ACA ++ G +H + K+ + SN+ V AL+N YAK
Sbjct: 349 DEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNH-IKKNNMGSNLPVSNALMNMYAK 407
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG + A ++F + KN V+W+ MIGGY +L LF DM ++++P++V +
Sbjct: 408 CGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDM-QKQLKPDDVTMACV 466
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC-MVDLLARAGRLEEALEFMENMPIE 597
L AC+ + +G + + R F S H C +VD+ + G L A + + +P +
Sbjct: 467 LPACAGLAALEKGREIHGHILRKGYF--SDLHVACALVDMYVKCGLLVLAQQLFDMIP-K 523
Query: 598 PDVSLFGAFLHGCGLY 613
D+ L+ + G G++
Sbjct: 524 KDMILWTVMIAGYGMH 539
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 212/424 (50%), Gaps = 22/424 (5%)
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+G S + + T + V + I + + + + L +R + +E N T S++
Sbjct: 9 VGVSATLSETTHNNVTVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQL 66
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA+L++L GK +H I G+ I+ L L+ MYV CG++ R +FD + + + W
Sbjct: 67 CAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLW 126
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++ Y + G +++ LF + + T VL A + + VH ++
Sbjct: 127 NLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLK 186
Query: 376 LGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
LG Y V+N+L+ Y KC + AR +F+ S++DV++WNS+ISG
Sbjct: 187 LGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEF 246
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
L+ V D+ TLV+V+ ACA++G + +G +LHAY K G S V LL+ Y+
Sbjct: 247 FIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAG-FSGGVMFNNTLLDMYS 305
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG+ A VF M E V+W+++I + +G ++ LF +M ++ ++P+ T+
Sbjct: 306 KCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTS 365
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
++ AC+ + + +G + ++ + ++ ++++ A+ G +EEA +P++
Sbjct: 366 VVHACACSNSLDKGRE-VHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK 424
Query: 598 PDVS 601
VS
Sbjct: 425 NIVS 428
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/632 (35%), Positives = 339/632 (53%), Gaps = 22/632 (3%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
KA HA +I + LV++Y ++ A+ VF+ + N D S+ +I Y +
Sbjct: 26 KALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHG 85
Query: 126 LY--KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFV 182
++E ++ MR + F+ V A L D G H +K+ D FV
Sbjct: 86 PSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFV 145
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ L++MY K +R+VFD ++N VSW +MI+GY A E L LF MR
Sbjct: 146 GSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEE 205
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N+ S+++A ++ GK +H +K G+ + AL+ MY KCG++ DA
Sbjct: 206 GENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQ 265
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F+ + ++W+AMI GY QSG DKALKLF+ + P+ T V++A + LG
Sbjct: 266 TFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGA 325
Query: 363 LNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
G+ VH ++LG E V+ ALVDMYAKC I DAR F+ E D++ W S+I G
Sbjct: 326 AWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGG 385
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
N + P+ +T+ SV+ AC+SL A++ G +HA + K G
Sbjct: 386 YVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGF-GL 444
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V +G+AL YAKCG + +VF M ++ ++W+AMI G G G +L LF +M
Sbjct: 445 EVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQ 504
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
E +P+ V F ILSACSH G+V GW F M +F P ++HY CMVD+L+RAG+L
Sbjct: 505 LEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKL 564
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA+EF E+ I+ + L+ L C Y ++LG +K++EL ++ YVL+S++Y
Sbjct: 565 KEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIY 624
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++ GRW V +VR +MK RG+SK PGCS ++L
Sbjct: 625 SALGRWEDVERVRRMMKLRGVSKEPGCSWIEL 656
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 162/512 (31%), Positives = 246/512 (48%), Gaps = 57/512 (11%)
Query: 160 RDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
R + +G +H +I+K ++ LV++YAKC+ + ++ VF+ +K+VVSW +I
Sbjct: 20 RSLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIIN 79
Query: 220 GYVQNDCAQEGLV--LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
GY Q+ + V LF RMR N T + TA + L G+ H +K+
Sbjct: 80 GYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDS 139
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
+ + ++L++MY K G +AR VFD + + VSW MI GY +AL LF
Sbjct: 140 CRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHV 396
+ + N SVLSA +N G+ +H + ++ GL +V NALV MYAKC
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS 259
Query: 397 IADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISA 439
+ DA FET+S+K+ I W+++I+G + + P T V VI+A
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C+ LGA G +H Y K G S +YV TAL++ YAKC AR FD ++E + V
Sbjct: 320 CSDLGAAWEGKQVHDYLLKLG-FESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVL 378
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM------------ 547
W++MIGGY G+ +L+L+ M E + PNE+ ++L ACS
Sbjct: 379 WTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTV 438
Query: 548 ---------VGEGWKCFYSMC---RD----FKFVPSMK--HYVCMVDLLARAGRLEEALE 589
+G Y+ C +D F+ +P+ + M+ L++ G +EALE
Sbjct: 439 KYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALE 498
Query: 590 FMENMPIE---PDVSLFGAFLHGC---GLYSR 615
E M +E PD F L C GL R
Sbjct: 499 LFEEMQLEGTKPDYVTFVNILSACSHMGLVER 530
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/656 (34%), Positives = 360/656 (54%), Gaps = 29/656 (4%)
Query: 45 HSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYAR 100
H+LP + + C + G++ + H GL ND + LV MY G + AR
Sbjct: 142 HTLPYV-----VKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNAR 196
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR 160
FD +P D + VM+ V ++ MR E + + L C
Sbjct: 197 DAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDA 256
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
D+ G ++H VK G P+ V L+ MYAKC+ + + ++F+ ++V+W MI+
Sbjct: 257 DLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMIS 316
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
G VQN E LF M+ + ITL SL+ A L L QGK +HGYI++ + +
Sbjct: 317 GCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNM 376
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ LV+AL+D+Y KC ++R A++++D +ID+V + MI GY +G ++AL++F
Sbjct: 377 DVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLL 436
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIA 398
PN VTIASVL A + L +G+ +H +R E + +AL+DMYAKC +
Sbjct: 437 EQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLD 496
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDNVSP-----------------DAVTLVSVISACA 441
+ YIF S+KD + WNS+IS N P + +T+ + +SACA
Sbjct: 497 LSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACA 556
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
SL A+ G +H + K G + ++++ +AL++ YAKCG+ + A VF+ M +KN V+W+
Sbjct: 557 SLPAIYYGKEIHGVTIK-GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWN 615
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
++I YG G S++L M E +P+ V F ++SAC+H G+V EG + F M +
Sbjct: 616 SIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKK 675
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
+ P M+H+ CMVDL +R+G+L++A++F+ +MP +PD ++GA LH C ++ +L ++
Sbjct: 676 YLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADI 735
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+++ +L P + YYVL+SN+ A GRW V++VR LMK + K PG S VD++
Sbjct: 736 ASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVN 791
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 201/462 (43%), Gaps = 63/462 (13%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLV--TALLDMYVKCGNIRDARSVFD 305
L +++ C L G +H + G + ++HL T LL MYV RDA +VF
Sbjct: 35 LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFS 94
Query: 306 EL---CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW---ADFFPNHVTIASVLSASAQ 359
L + + W +I G+T +G A+ LF K W A P+ T+ V+ + A
Sbjct: 95 ALPRAAAASSLPWNWLIRGFTAAGQHHLAV-LFYVKMWSHPAAPSPDAHTLPYVVKSCAA 153
Query: 360 LGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
LG +++GR+VH +GL D V +ALV MYA ++ +AR F+ E+D + WN +
Sbjct: 154 LGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVM 213
Query: 419 ISG------LDDNV-----------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ G +D V P+ TL +S CA+ + G+ LH+ + K G
Sbjct: 214 MDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCG- 272
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
L V V LL YAKC A +F+ M + + VTW+ MI G G + LF
Sbjct: 273 LEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFY 332
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC---------------------FYSMCR 560
DM +P+ + ++L A + + +G + Y CR
Sbjct: 333 DMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCR 392
Query: 561 DFKFVPSMKHYVCMVDLLARA---------GRLEEALE---FMENMPIEPDVSLFGAFLH 608
D + ++ +D++ + G EEAL+ ++ I+P+ + L
Sbjct: 393 DVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLP 452
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYY-VLVSNLYASDGR 649
GC + LG+ + +L ++ CY + ++YA GR
Sbjct: 453 GCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGR 494
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 236/713 (33%), Positives = 382/713 (53%), Gaps = 71/713 (9%)
Query: 27 TNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCN-TK 85
T+ P Q+EL + S P+ CK+ LK H+ + +GL + + T
Sbjct: 16 TSVALPNQNEL-KILTKHRSSPT----GSFKKCKTMTELKQLHSQITKNGLNHHPLSLTN 70
Query: 86 LVSM---YGSFGHVKYARSVFDSMPNPD-----FYSFQVMIRWYFLNDL-YKDIVEFYK- 135
L+S G+F ++YA+ + + Y F +IR + L YK IV F +
Sbjct: 71 LISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQL 130
Query: 136 -CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC 193
CM DNF F VL AC + + EG +VH IVK+G D FV L+ Y +C
Sbjct: 131 MCMGAV---PDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGEC 187
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLV 253
+I R+VFD+ ++NVVSWTS+I GY + C +E + LF M E + N +T+ ++
Sbjct: 188 GEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVI 247
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
+ACAKL+ L G+ + I ++ +E+N+ +V AL+DMY+KCG I AR +FDE +LV
Sbjct: 248 SACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLV 307
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
+ ++ Y + G + L + + P+ +T+ S +SA ++L +++ G+ H
Sbjct: 308 LYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYV 367
Query: 374 IRLGLEDY-TVINALVDMYAKC----------------------HVIA---------DAR 401
+R GLE + V NA+++MY KC +IA A
Sbjct: 368 LRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAW 427
Query: 402 YIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLG 444
IF + D+++WN++I L + ++ D VT+V V SAC LG
Sbjct: 428 KIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLG 487
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
A+ + +H Y K+ + ++++GTAL++ +A+CGD QSA VF+ M +++ W+A I
Sbjct: 488 ALDLAKWIHGYIKKKD-IHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAI 546
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G M+G+G G++ LF +ML + ++P+ V+F +L+A SH G+V +GW F SM +
Sbjct: 547 GAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGI 606
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
P HY CMVDLL RAG L EAL + +M +EP+ ++G+ L C ++ D+ +
Sbjct: 607 APQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAE 666
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
++ EL P++ +VL+SN+YAS GRW V +VR +K++G K PG S ++++
Sbjct: 667 RISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEIN 719
>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 701
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/648 (33%), Positives = 349/648 (53%), Gaps = 25/648 (3%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
+ LL C S S+ H+ + GL D TKL +Y + + +A +F+ P
Sbjct: 8 VKLLETCCSKISITQLHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTV 67
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRL---KEHDNFVFSKVLKACCELRDIDEGMKV 168
Y + ++R YFL + + + + M + DN+ S LK+C L+ ++ G +
Sbjct: 68 YLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMI 127
Query: 169 HCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
H + K D FV + L+++Y+KC + + +VF E +VV WTS+I GY QN +
Sbjct: 128 HGFLKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPE 187
Query: 229 EGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
L F+RM V + +TL S +ACA+L + G+ +HG++ + G + L ++
Sbjct: 188 LALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSI 247
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L++Y K G+IR A ++F E+ D++SW++M+ Y +G AL LF + N
Sbjct: 248 LNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNR 307
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
VT+ S L A A NL G+ +H L + G E D TV AL+DMY KC +A +F
Sbjct: 308 VTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNR 367
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
+KDV++W + SG L + PDA+ LV +++A + LG VQ
Sbjct: 368 MPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQA 427
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
LHA+ TK G +N ++G +L+ YAKC +A VF +R + VTWS++I YG
Sbjct: 428 LCLHAFVTKSGF-DNNEFIGASLIELYAKCSSIDNANKVFKGLRHTDVVTWSSIIAAYGF 486
Query: 510 QGDGGGSLALFSDMLNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G G +L L M N +V+PN+V F +ILSACSH G++ EG K F+ M +++ +P++
Sbjct: 487 HGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPNI 546
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY MVDLL R G L++AL+ + NMP++ ++GA L C ++ +GE+ +
Sbjct: 547 EHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGALLGACRIHQNIKIGELAALNLFL 606
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L P+ A YY L+SN+Y D W ++R L+K+ L K G S+V++
Sbjct: 607 LDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRLKKIVGQSMVEI 654
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 330/595 (55%), Gaps = 61/595 (10%)
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKC 193
CM K+ E + +S VL+ C L+ +G KVH I+K G D + LV YA C
Sbjct: 90 CMCKK-SELETKTYSSVLQLCAGLKSFTDGKKVH-SIIKSNSVGVDEALGLKLVSFYATC 147
Query: 194 RDIGSSRQVFD------------------------------------------------- 204
D+ R+VFD
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFEL 207
Query: 205 --ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
+ D++V+SW SMI+GYV N + GL ++ +M ++ + T+ S++ CA L
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H +K E + LLDMY KCG++ A VF+++ ++VSWT+MI GY
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
T+ G D A+KL + + V I S+L A A+ G+L+ G+ VH +E +
Sbjct: 328 TRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNL 387
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACA 441
V NAL+DMYAKC + A +F T KD+I+WN++I L PD+ T+ V+ ACA
Sbjct: 388 FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL----KPDSRTMACVLPACA 443
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
SL A++ G +H Y + G SS+ +V AL++ Y KCG AR++FD + K+ V+W+
Sbjct: 444 SLSALERGKEIHGYILRNGY-SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
MI GYGM G G ++A F++M + ++P+EV F +IL ACSH+G++ +GW+ FY M D
Sbjct: 503 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKND 562
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
F P ++HY CMVDLL+R G L +A EF+E +PI PD +++GA L GC Y +L E
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEK 622
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +++ EL P+ + YYVL++N+YA +W V ++RE + ++GL K+PGCS +++
Sbjct: 623 VAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEI 677
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 180/370 (48%), Gaps = 40/370 (10%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A +FD + + D S+ MI Y N L + + YK M + D VL C
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 159 LRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
+ G VH +K + L+DMY+KC D+ + +VF++ ++NVVSWTSM
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
IAGY ++ + + L +M + V+ + + + S++ ACA+ +L GK +H YI +
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
E N + AL+DMY KCG++ A SVF + D++SW MI
Sbjct: 384 ESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------------------ 425
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHV 396
+ P+ T+A VL A A L L G+ +H +R G D V NALVD+Y KC V
Sbjct: 426 ---GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 482
Query: 397 IADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISA 439
+ AR +F+ KD+++W +I+G D + PD V+ +S++ A
Sbjct: 483 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 542
Query: 440 CASLGAVQVG 449
C+ G ++ G
Sbjct: 543 CSHSGLLEQG 552
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 179/375 (47%), Gaps = 37/375 (9%)
Query: 59 CKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C ++G+L KA H+L I + L+ MY G + A VF+ M + S+
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MI Y + ++ + M K + D + +L AC +D G VH + +K
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH-DYIK 379
Query: 175 VGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
+S FV L+DMYAKC + ++ VF + K+++SW +MI
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-------------- 425
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
G ++ + T+ ++ ACA L AL +GK +HGYIL+ G + H+ AL+D+YV
Sbjct: 426 -------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
KCG + AR +FD + S DLVSWT MI GY GY ++A+ F + + A P+ V+ S
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 353 VLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETT 407
+L A + G L G M + I LE Y +VD+ ++ ++ A ET
Sbjct: 539 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA---CMVDLLSRTGNLSKAYEFIETL 595
Query: 408 S-EKDVIAWNSIISG 421
D W +++ G
Sbjct: 596 PIAPDATIWGALLCG 610
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 215/512 (41%), Gaps = 102/512 (19%)
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
T+D V + + I + Q + + L ++ +E T S++ CA L++ G
Sbjct: 61 TIDHQVTDYNAKILHFCQLGDLENAMELICMCKKSELETK--TYSSVLQLCAGLKSFTDG 118
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV---------------------- 303
K +H I + ++ L L+ Y CG++++ R V
Sbjct: 119 KKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178
Query: 304 -----------------------------FDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
FD+LC D++SW +MI GY +G ++ L +
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
+ + + TI SVL A G L++G+ VHSL I+ E N L+DMY+K
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK 298
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
C + A +FE E++V++W S+I+G + V D V + S+
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSI 358
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ ACA G++ G +H Y K + SN++V AL++ YAKCG ++A VF M K+
Sbjct: 359 LHACARSGSLDNGKDVHDY-IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKD 417
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
++W+ MIG E++P+ +L AC+ + G +
Sbjct: 418 IISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIHG 456
Query: 557 SMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+ R+ S +H +VDL + G L A + +P D+ + + G G++
Sbjct: 457 YILRN--GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGY 513
Query: 616 FDLGEVMIKKMLE--LHPDKACYYVLVSNLYA 645
+ +M + + PD+ + +S LYA
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSF---ISILYA 542
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C S +L K H ++ +G ++D+ LV +Y G + AR +FD +P+ D
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
S+ VMI Y ++ + + + MR E D F +L AC +++G +
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/658 (34%), Positives = 358/658 (54%), Gaps = 26/658 (3%)
Query: 42 ASFHSLPSIPCLNLLGLCKSTGS----LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHV 96
F+ LP+I N L L + + +K+ HA +I + L+ D+ TKLV Y +
Sbjct: 22 GQFNQLPTI-IHNFLSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSL 80
Query: 97 KYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC 156
+ AR VFD P M+ Y + Y++ +E + MR R E D+ + LKAC
Sbjct: 81 EAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKAC 140
Query: 157 CELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWT 215
D + GM++ V+ G + FV + ++ K IG +++VFD +K+VV W
Sbjct: 141 ASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWN 200
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
S+I GYVQ C LF M ++ + IT+ SL+ AC + L GK +HGY+L +
Sbjct: 201 SIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGL 260
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G+ + ++T+ +DMY K G+I AR VF ++ + +LVSW AMI G ++G ++ LF
Sbjct: 261 GLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLF 320
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCH 395
+ + TI S+L +Q +L G+++H IR + + A+VD+Y+KC
Sbjct: 321 HRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKCG 380
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVIS 438
+ A ++F +++VI W +++ GL N ++ ++VT VS++
Sbjct: 381 SLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVH 440
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD-AMREKNT 497
+CA LG+++ G S+H + + G + ++ TAL++ YAKCG A +F K+
Sbjct: 441 SCAHLGSLKRGRSIHGHLFRLGF-AFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDV 499
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V W++MI GYGM G G ++ ++ M+ E ++PN+ F ++LSACSH+ +V +G F S
Sbjct: 500 VLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNS 559
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
M RD P KHY C+VDLL+RAGR EEA +E MP +P ++ A L GC + +
Sbjct: 560 MERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNIN 619
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
LG K+L L Y+++SN+YA RW +V+ +R LM+ RGL K+PG SLV+
Sbjct: 620 LGIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVE 677
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/648 (33%), Positives = 359/648 (55%), Gaps = 26/648 (4%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
NLL L S + K H +IV GL +D L+++ V AR VFD MP+
Sbjct: 54 NLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHK 113
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN-FVFSKVLKACCELRDIDEGMKV 168
+ ++ M+ Y ++ + + ++++ EH N FV + V++AC +L +++G ++
Sbjct: 114 NLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQL 173
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +V+ G D +V T L+D Y+K +I +R VFD+ +K V+WT++IAGY + +
Sbjct: 174 HGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRS 233
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
L LF +MRE V ++ + S+++AC+ L L GK +H Y+L+ G E++ +V L
Sbjct: 234 AVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVL 293
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+D Y KC ++ R +FD++ +++SWT MI GY Q+ + +A+KLF + + P+
Sbjct: 294 IDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDG 353
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
SVL++ L GR VH+ I+ LE D V N L+DMYAK +++ DA+ +F+
Sbjct: 354 FACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDV 413
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+E++VI++N++I G P+ T ++I+A ++L +++ G
Sbjct: 414 MAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHG 473
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
H K G L +V AL++ YAKCG + AR +F++ ++ V W++MI +
Sbjct: 474 QQFHNQLVKMG-LDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQ 532
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G+ +L +F +M+ E +QPN V F +LSACSH G V +G F SM F P +
Sbjct: 533 HGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTE 591
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY C+V LL R+G+L EA EF+E MPIEP ++ + L C + +LG+ + +
Sbjct: 592 HYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIST 651
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P + Y+L+SN++AS G W V +VR+ M + K PG S ++++
Sbjct: 652 DPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVN 699
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 235/700 (33%), Positives = 383/700 (54%), Gaps = 41/700 (5%)
Query: 3 LISLLQRHVSRTKKPKLQLR------FFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLL 56
++SLL+ R KP LQL+ FFS ++ Q H+ D +++ L +
Sbjct: 1 MLSLLKCLPPRNFKPILQLQQPCIYHFFS-SSLQHKISHDPDNKNNKNNNVVVDFNL-VF 58
Query: 57 GLCKSTGSLKAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
C + K HALL+V G D T+LV++Y + G + + + F + + +S+
Sbjct: 59 RSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWN 118
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLK----EHDNFVFSKVLKACCELRDIDEGMKVHCE 171
M+ Y Y+D ++ C+ + L D + F VLKAC L D G K+HC
Sbjct: 119 SMVSAYVRRGRYRDSMD---CVTELLSLSGVRPDFYTFPPVLKACLSLAD---GEKMHCW 172
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
++K+G D +V L+ +Y++ + + +VF + ++V SW +MI+G+ QN E
Sbjct: 173 VLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEA 232
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L + +RM+ V+ + +T+ S++ CA+ + G +H Y++K G+E + + AL++M
Sbjct: 233 LRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINM 292
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y K G ++DA+ VFD + DLVSW ++I Y Q+ P AL F + + P+ +T+
Sbjct: 293 YSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTV 352
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLG-LE-DYTVINALVDMYAKCHVIADARYIFETTS 408
S+ S QL + +GR VH +R LE D + NALV+MYAK I AR +FE
Sbjct: 353 VSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLP 412
Query: 409 EKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGS 450
+DVI+WN++I+G N + P+ T VS++ A + +GA+Q G
Sbjct: 413 SRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGM 472
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H K L +V+V T L++ Y KCG + A +F + ++ +V W+A+I G+
Sbjct: 473 KIHGRLIKNCLFL-DVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIH 531
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L LF DM + V+ + + F ++LSACSH+G+V E CF +M ++++ P++KH
Sbjct: 532 GHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKH 591
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVDL RAG LE+A + NMPI+ D S++G L C ++ +LG ++LE+
Sbjct: 592 YGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVD 651
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
+ YYVL+SN+YA+ G+W +VR L + RGL K+PG
Sbjct: 652 SENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPG 691
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/593 (35%), Positives = 335/593 (56%), Gaps = 55/593 (9%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KLVS Y + G +K R VFD+M + Y + M+ Y +K+ + +K M
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIM------- 53
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+++G++ G S S+ ++FD
Sbjct: 54 -----------------VEKGIE---------GKRS----------------ESASELFD 71
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ D++V+SW SMI+GYV N + GL ++ +M ++ + T+ S++ CAK L
Sbjct: 72 KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSL 131
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H +K E + LLDMY KCG++ A VF+++ ++VSWT+MI GYT+
Sbjct: 132 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 191
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIRLGLEDYTV 383
G+ D A+ L + + V I S+L A A+ G+L+ G+ VH + + V
Sbjct: 192 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFV 251
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASL 443
NAL+DMYAKC + A +F T KD+I+WN+++ L PD+ T+ ++ ACASL
Sbjct: 252 CNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL----KPDSRTMACILPACASL 307
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
A++ G +H Y + G SS+ +V AL++ Y KCG AR++FD + K+ V+W+ M
Sbjct: 308 SALERGKEIHGYILRNGY-SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVM 366
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I GYGM G G ++A F++M + ++P+EV F +IL ACSH+G++ +GW+ FY M DF
Sbjct: 367 IAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFN 426
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
P ++HY CMVDLL+R G L +A +F+E +PI PD +++GA L GC +Y +L E +
Sbjct: 427 IEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVA 486
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+++ EL P+ YYVL++N+YA +W V ++RE + ++GL K+PGCS +++
Sbjct: 487 ERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEI 539
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C S +L K H ++ +G ++D+ LV +Y G + AR +FD +P+ D
Sbjct: 300 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 359
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
S+ VMI Y ++ + + + MR E D F +L AC +++G +
Sbjct: 360 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 416
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/614 (36%), Positives = 353/614 (57%), Gaps = 19/614 (3%)
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+ ++SM FG +A VF MP D +S+ VM+ Y + L + ++ Y M
Sbjct: 124 RLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWA 183
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
D + F VL++C + D G +VH +++ G G + VL L+ MYAKC D+ ++
Sbjct: 184 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAA 243
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R+VFD + +SW +MIAG+ +N GL LF M V+ N +T+ S+ A L
Sbjct: 244 RKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLL 303
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ K +HG +K G + +L+ MY G +R AR+VF + + D ++WTAMI
Sbjct: 304 SDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMI 363
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY ++G+PDKAL+++ + + P+ +TIAS L+A A LG+L++G +H L G
Sbjct: 364 SGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFI 423
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y V+ NA+++MYAK I A +F+ EKDV++W+S+I+G N
Sbjct: 424 SYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM 483
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V P++VT ++ ++ACA+ GA++ G +HA+ + G+ Y+ AL++ Y KCG
Sbjct: 484 LADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEG-YLPNALIDLYVKCGQT 542
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A F A K+ V+W+ MI G+ G G +L+ F+ M+ P+EV F +L AC
Sbjct: 543 GYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVALLCAC 602
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S GMV EGW+ F+SM + VP++KHY CMVDLL+RAG+L EA F+ MPI PD ++
Sbjct: 603 SRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAV 662
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L+GC ++ +LGE+ K +L L P+ A Y+VL+ +LYA W ++ +VR+ M++
Sbjct: 663 WGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVRKTMRE 722
Query: 663 RGLSKSPGCSLVDL 676
+GL GCS V++
Sbjct: 723 KGLDHDSGCSWVEV 736
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/637 (35%), Positives = 346/637 (54%), Gaps = 47/637 (7%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV+MYG G + VFD + + D S+ I + ++ +E ++ M+ E
Sbjct: 134 LVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELS 193
Query: 146 NFVFSKVLKACCEL---RDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
+F V AC L + G ++H ++VG +F L+ MYAK + S+ +
Sbjct: 194 SFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKAL 253
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ +D+++VSW +MI+ + Q+D E L F M VE + +T+ S++ AC+ L L
Sbjct: 254 FESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERL 313
Query: 263 HQGKWLHGYILKIGIEI-NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
GK +H Y+L+ I NS + +AL+DMY C + R VFD + + W AMI G
Sbjct: 314 DVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISG 373
Query: 322 YTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-E 379
Y ++G +KAL LF + K A PN T+ASV+ A + +H ++LG E
Sbjct: 374 YARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKE 433
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--LDDNVS---------- 427
D V NAL+DMY++ + + IF++ +D ++WN++I+G L S
Sbjct: 434 DRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQ 493
Query: 428 ----------------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
P+A+TL++V+ CA+L A+ G +HAY+ + +L+S+
Sbjct: 494 RMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRN-MLASD 552
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+ VG+AL++ YAKCG +R VF+ M KN +TW+ +I GM G G +L LF +M+
Sbjct: 553 ITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVA 612
Query: 526 E-----EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
E E +PNEV F T+ +ACSH+G++ EG FY M D P+ HY C+VDLL R
Sbjct: 613 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGR 672
Query: 581 AGRLEEALEFMENMPIEPD-VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
AG+LEEA E + MP E D V + + L C ++ +LGEV K +L L P+ A +YVL
Sbjct: 673 AGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVL 732
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+SN+Y+S G W + +VR+ M+Q G+ K PGCS ++
Sbjct: 733 LSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEF 769
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 256/546 (46%), Gaps = 47/546 (8%)
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL 183
ND +++ + Y M DNF F VLKA L+D+ G ++H VK G S V
Sbjct: 71 ND-FREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVT 129
Query: 184 TG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
LV+MY KC IG +VFD D++ VSW S IA + + ++ L F M+
Sbjct: 130 VANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMEN 189
Query: 242 VEGNQITLGSLVTACAKLRALHQ---GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+E + TL S+ AC+ L +H GK LHGY L++G + + AL+ MY K G +
Sbjct: 190 MELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVD 248
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
D++++F+ D+VSW MI ++QS +AL F + VTIASVL A +
Sbjct: 249 DSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACS 308
Query: 359 QLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
L L++G+ +H+ +R +E+ V +ALVDMY C + R +F+ + + WN
Sbjct: 309 HLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWN 368
Query: 417 SIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
++ISG N + P+ T+ SV+ AC A S+H Y+ K
Sbjct: 369 AMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVK 428
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G + YV AL++ Y++ G + +FD+M ++ V+W+ MI GY + G +L
Sbjct: 429 LG-FKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALV 487
Query: 519 LFSDMLNEE-----------------VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
L +M E +PN + T+L C+ + +G + R+
Sbjct: 488 LLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRN 547
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
+ +VD+ A+ G L + MP +V + + CG++ + +
Sbjct: 548 M-LASDITVGSALVDMYAKCGCLNLSRRVFNEMP-NKNVITWNVLIMACGMHGKGEEALE 605
Query: 622 MIKKML 627
+ K M+
Sbjct: 606 LFKNMV 611
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 232/487 (47%), Gaps = 47/487 (9%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
K H + G N L++MY G V ++++F+S + D S+ MI + +D
Sbjct: 217 KQLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSD 276
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVL 183
+ + + F++ M E D + VL AC L +D G ++H +++ +SFV
Sbjct: 277 RFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVG 336
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFV 242
+ LVDMY CR + S R+VFD L + + W +MI+GY +N ++ L+LF M + +
Sbjct: 337 SALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGL 396
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N T+ S++ AC A + +HGY +K+G + + ++ AL+DMY + G + + +
Sbjct: 397 LPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISET 456
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD-----------------FFP 345
+FD + D VSW MI GY SG AL L + + + + P
Sbjct: 457 IFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKP 516
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF 404
N +T+ +VL A L + G+ +H+ IR L D TV +ALVDMYAKC + +R +F
Sbjct: 517 NAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVF 576
Query: 405 ETTSEKDVIAWNSII----------------------SGLDDNVSPDAVTLVSVISACAS 442
K+VI WN +I +G P+ VT ++V +AC+
Sbjct: 577 NEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSH 636
Query: 443 LGAVQVGSSL-HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK--NTVT 499
G + G +L + G+ ++ + +++ + G + A + + M +
Sbjct: 637 SGLISEGLNLFYRMKHDHGVEPTSDHYA-CVVDLLGRAGQLEEAYELVNTMPAEFDKVGA 695
Query: 500 WSAMIGG 506
WS+++G
Sbjct: 696 WSSLLGA 702
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/683 (33%), Positives = 372/683 (54%), Gaps = 44/683 (6%)
Query: 21 LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND 80
L F +Q P +H L L L C S L H L+ LT+D
Sbjct: 4 LYFHGNASQARPIRHHL---------------LAYLDACASRAHLAELHGRLVRAHLTSD 48
Query: 81 K-CNTKLVSMYGSFG---HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC 136
+L+++ S ++YAR VFD M P+ + + MIR Y + +D + ++
Sbjct: 49 SFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFRE 108
Query: 137 MRKRLKEHDNFVFSKVLKACCE---LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
MR+R DN+ + V+ A L+ G +H + ++G D FV++GLV+ Y
Sbjct: 109 MRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGA 168
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
R + + +VF+E +++VVSWTSMI+ Q + L + + M+ + N++T+ SL
Sbjct: 169 FRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISL 228
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
++AC + +A+ +G+W++ + K GIE + + AL+ MY KCG + DA F + +
Sbjct: 229 LSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYT 288
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
SW +I G+ Q+ +AL++F + P+ +T+ SVLSA AQLG L G VHS
Sbjct: 289 KSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSY 348
Query: 373 GIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD------- 424
G+ D + N+L++MYAKC +A A +F+T ++KDV++W ++ G
Sbjct: 349 IKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMA 408
Query: 425 ----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
V + LVS++SAC+ LGA+ G +H+Y + ++ ++ + +AL++
Sbjct: 409 FNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMN-VAKDLCLESALVD 467
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN-EEVQPNEV 533
YAKCG +A +F M+ K T++W+AMIGG G G ++ LF ML ++ +P+ +
Sbjct: 468 MYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGI 527
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
+L AC+H GMV EG + FY M VP +HY C+VDLL RAG L+EA F++
Sbjct: 528 TLKAVLGACAHVGMVDEGLRYFYLM-SSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKK 586
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
MPIEP+ ++G+ L C ++ R DLG+V+ + ++ + P+ +VLVSNL+A + +W V
Sbjct: 587 MPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDV 646
Query: 654 NQVRELMKQRGLSKSPGCSLVDL 676
VR LM RG+ K+PG S V +
Sbjct: 647 EHVRGLMGSRGIEKTPGHSSVQV 669
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/601 (33%), Positives = 335/601 (55%), Gaps = 24/601 (3%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
AR +F M Y + +++ +++++ + M + ++ DNF LKAC E
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 159 LRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
LR+++ G +H + K G D +V + L+ MY KC + + ++FDE ++V+W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 217 MIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
M++G+ +N + + F RM V +++TL +LV+AC KL G+ +HG++++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G + LV +LL+ Y K ++A ++F + D++SW+ +I Y Q+G +AL +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
D PN T+ VL A A +L GR H L IR GLE + V ALVDMY KC
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 395 HVIADARYIFETTSEKDVIAWNSIISG------------------LDDNVSPDAVTLVSV 436
+A +F KDV++W ++ISG L++N PDA+ +V V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ +C+ LG ++ H+Y K G SN ++G +L+ Y++CG +A VF+ + K+
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGF-DSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
TV W+++I GYG+ G G +L F+ M+ + EV+PNEV F +ILSACSH G++ EG + F
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF 491
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
M D++ P+++HY +VDLL R G L+ A+E + MP P + G L C ++
Sbjct: 492 KLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQN 551
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
++ E + KK+ EL + A YY+L+SN+Y G W V ++R +KQRG+ K SL++
Sbjct: 552 GEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIE 611
Query: 676 L 676
+
Sbjct: 612 I 612
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 209/424 (49%), Gaps = 22/424 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK- 142
+ L+ MY G + A +FD + PD ++ M+ + N VEF++ M
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D ++ AC +L + G VH +++ G D ++ L++ YAK R +
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F +K+V+SW+++IA YVQN A E L++FN M + E N T+ ++ ACA
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L QG+ H ++ G+E + TAL+DMY+KC + +A +VF + D+VSW A+I G
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 322 YTQSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
+T +G ++++ F+ + P+ + + VL + ++LG L + HS I+ G +
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 381 YTVINA-LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------- 422
I A LV++Y++C + +A +F + KD + W S+I+G
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
V P+ VT +S++SAC+ G + G + L+ N+ L++ + GD
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 519
Query: 482 AQSA 485
+A
Sbjct: 520 LDTA 523
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 25/335 (7%)
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DAR +F E+ L W ++ ++ ++ L F+ + P++ T+ L A
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 359 QLGNLNMGRMVHSL---GIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+L +N G M+H + LG D V ++L+ MY KC + +A +F+ + D++ W
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLG-SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 416 NSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
+S++SG + N V+PD VTL++++SAC L ++G +H +
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
++G S+++ + +LLN YAK + A +F + EK+ ++WS +I Y G +L
Sbjct: 191 RRG-FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
+F+DM+++ +PN +L AC+ + +G K R +K +VD+
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDM 308
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ EEA +P DV + A + G L
Sbjct: 309 YMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTL 342
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 4/201 (1%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL- 126
H L I GL T K +T LV MY + A +VF +P D S+ +I + LN +
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
++ I EF + + D + KVL +C EL +++ H ++K G + F+
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 406
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEG 244
LV++Y++C +G++ +VF+ K+ V WTS+I GY + + L FN M + V+
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 466
Query: 245 NQITLGSLVTACAKLRALHQG 265
N++T S+++AC+ +H+G
Sbjct: 467 NEVTFLSILSACSHAGLIHEG 487
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/677 (33%), Positives = 361/677 (53%), Gaps = 33/677 (4%)
Query: 21 LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND 80
L+ +++ + P H S +L +I L+ H GL D
Sbjct: 133 LKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLV------------HRTARTLGLDGD 180
Query: 81 K-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
+ L+ MY + G + AR VFD M D + VM+ Y VE + MR
Sbjct: 181 MFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRA 240
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
E + + L D+ G+++H VK G + V LV MYAKC+ +
Sbjct: 241 SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDD 300
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
++F ++V+W MI+G VQN + L+LF M++ + + +TL SL+ A
Sbjct: 301 GWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTD 360
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L +QGK LHGYI++ + ++ LV+AL+D+Y KC +R A+SV+D +ID+V + M
Sbjct: 361 LNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTM 420
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I GY +G +A+K+F PN V IASVL A A + + +G+ +HS ++
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 379 EDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDA------- 430
E + +AL+DMYAKC + + YIF S KD + WNS+IS N P+
Sbjct: 481 EGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFRE 540
Query: 431 ----------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
VT+ SV+SACASL A+ G +H K G + ++++ +AL++ Y KCG
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK-GPIRADLFAESALIDMYGKCG 599
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + A VF++M EKN V+W+++I YG G S++L M E + + V F ++S
Sbjct: 600 NLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVS 659
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
AC+H G V EG + F M +++ P M+H+ CMVDL +RAG+L++A+E + +MP +PD
Sbjct: 660 ACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDA 719
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++GA LH C ++ +L E+ +++ +L P + YYVL+SN+ A GRW V++VR LM
Sbjct: 720 GIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLM 779
Query: 661 KQRGLSKSPGCSLVDLD 677
K + K PG S VD++
Sbjct: 780 KDTKVQKIPGYSWVDVN 796
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/601 (29%), Positives = 286/601 (47%), Gaps = 31/601 (5%)
Query: 69 HALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD---FYSFQVMIRWYFL 123
H + GL T+ T+LV MY + A +VF S+P + +IR +
Sbjct: 62 HGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTM 121
Query: 124 NDLYKDIVEFYKCM--RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
Y+ + FY M D+ F V+K+C L I G VH +G D
Sbjct: 122 AGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDM 181
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
FV + L+ MYA + +RQVFD +++ V W M+ GYV+ + LF MR
Sbjct: 182 FVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRAS 241
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
E N TL ++ A L G LH +K G+E + L+ MY KC + D
Sbjct: 242 GCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDG 301
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F + DLV+W MI G Q+G+ D+AL LF D + + P+ VT+ S+L A L
Sbjct: 302 WKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDL 361
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
N G+ +H +R + D +++ALVD+Y KC + A+ +++++ DV+ +++I
Sbjct: 362 NGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMI 421
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
SG L+ + P+AV + SV+ ACAS+ A+++G LH+Y+ K
Sbjct: 422 SGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNA-Y 480
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
YV +AL++ YAKCG + +F + K+ VTW++MI + G+ +L LF +
Sbjct: 481 EGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFRE 540
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M E V+ + V +++LSAC+ + G K + + + ++D+ + G
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYG-KEIHGVVIKGPIRADLFAESALIDMYGKCG 599
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLV 640
LE A E+MP + +VS + + + G Y +++ M E D + LV
Sbjct: 600 NLEWAHRVFESMPEKNEVS-WNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALV 658
Query: 641 S 641
S
Sbjct: 659 S 659
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 223/464 (48%), Gaps = 37/464 (7%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
VL+ C + G++VH V G D+ + T LV MY R + VF +L +
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVF-SSLPR 103
Query: 210 NVVS----WTSMIAGYVQNDCAQEGLVLFNRM--REGFVEGNQITLGSLVTACAKLRALH 263
+ W +I G + L+ + +M + T +V +CA L A+
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H +G++ + + +AL+ MY G + DAR VFD + D V W M+ GY
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
++G A++LF D + + PN T+A LS SA +L G +H+L ++ GLE +
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVA 283
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V N LV MYAKC + D +F D++ WN +ISG N
Sbjct: 284 VANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSG 343
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD+VTLVS++ A L G LH Y + + +V++ +AL++ Y KC + A
Sbjct: 344 IRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRN-CVHMDVFLVSALVDIYFKCRAVRMA 402
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ V+D+ + + V S MI GY + G ++ +F +L + ++PN V ++L AC+
Sbjct: 403 QSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASM 462
Query: 546 GMVGEGWKCF-YSMCRDFK---FVPSMKHYVCMVDLLARAGRLE 585
+ G + Y++ ++ +V S ++D+ A+ GRL+
Sbjct: 463 AAMKLGQELHSYALKNAYEGRCYVES-----ALMDMYAKCGRLD 501
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/683 (33%), Positives = 372/683 (54%), Gaps = 44/683 (6%)
Query: 21 LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND 80
L F +Q P +H L L L C S L H L+ LT+D
Sbjct: 4 LYFHGNASQARPIRHHL---------------LAYLDACASRAHLAELHGRLVRAHLTSD 48
Query: 81 K-CNTKLVSMYGSFG---HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC 136
+L+++ S ++YAR VFD M P+ + + MIR Y + +D + ++
Sbjct: 49 SFVAGRLIALLASPAARHDMRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFRE 108
Query: 137 MRKRLKEHDNFVFSKVLKACCE---LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
MR+R DN+ + V+ A L+ G +H + ++G D FV++GLV+ Y
Sbjct: 109 MRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGA 168
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
R + + +VF+E +++VVSWTSMI+ Q + L + + M+ + N++T+ SL
Sbjct: 169 FRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISL 228
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
++AC + +A+ +G+W++ + K GIE + + AL+ MY KCG + DA F + +
Sbjct: 229 LSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARYT 288
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
SW +I G+ Q+ +AL++F + P+ +T+ SVLSA AQLG L G VHS
Sbjct: 289 KSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSY 348
Query: 373 GIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD------- 424
G+ D + N+L++MYAKC +A A +F+T ++KDV++W ++ G
Sbjct: 349 IKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMA 408
Query: 425 ----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
V + LVS++SAC+ LGA+ G +H+Y + ++ ++ + +AL++
Sbjct: 409 FNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMN-VAKDLCLESALVD 467
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN-EEVQPNEV 533
YAKCG +A +F M+ K T++W+AMIGG G G ++ LF ML ++ +P+ +
Sbjct: 468 MYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGI 527
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
+L AC+H GMV EG + FY M VP +HY C+VDLL RAG L+EA F++
Sbjct: 528 TLKAVLGACAHVGMVDEGLRYFYLM-SSLGVVPDTEHYGCIVDLLGRAGMLDEAFHFIKK 586
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
MPIEP+ ++G+ L C ++ R DLG+V+ + ++ + P+ +VLVSNL+A + +W V
Sbjct: 587 MPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEESQWDDV 646
Query: 654 NQVRELMKQRGLSKSPGCSLVDL 676
VR LM RG+ K+PG S V +
Sbjct: 647 EHVRGLMGSRGIEKTPGHSSVQV 669
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 219/640 (34%), Positives = 350/640 (54%), Gaps = 21/640 (3%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
KS K H + + GL D + L+ +Y GH+ A+ +FD++P D + VM+
Sbjct: 72 KSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVML 131
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP 178
Y N + ++ + MR + ++ F+ VL C +D G ++H V G
Sbjct: 132 NGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLE 191
Query: 179 -DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
DS V L+ MY+KC+ + ++R++FD + ++VSW +I+GYVQN E LF M
Sbjct: 192 LDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGM 251
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
++ + IT S + +L +L K +HGYI++ + ++ L +AL+D+Y KC ++
Sbjct: 252 ISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDV 311
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
A+ + + S D V T MI GY +G +AL+ F P VT +S+ A
Sbjct: 312 EMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAF 371
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A L LN+G+ +H I+ L++ V +A++DMYAKC + A +F +EKD I WN
Sbjct: 372 AGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431
Query: 417 SIISGLDDNVSP-----------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
S+I+ N P D V++ +SACA+L A+ G +H K
Sbjct: 432 SMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK- 490
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G L S++Y ++L++ YAKCG+ +R VFD M+E+N V+W+++I YG GD LAL
Sbjct: 491 GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLAL 550
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F +ML +QP+ V F I+SAC H G V EG + ++ M ++ M+HY C+ D+
Sbjct: 551 FHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFG 610
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
RAGRL+EA E + +MP PD ++G L C ++ +L EV K + +L P + YYVL
Sbjct: 611 RAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVL 670
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
++N+ A G+W +V +VR +MK+RG+ K PG S ++++ A
Sbjct: 671 LANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNA 710
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 170/616 (27%), Positives = 279/616 (45%), Gaps = 57/616 (9%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MY G +K A+++F ++ ++ MIR + + + + FY M D +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F V+KACC L+ + G VH E V + G D FV + L+ +YA+ + ++ +FD
Sbjct: 61 FPYVVKACCGLKSVKMGKIVH-ETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
K+ V W M+ GYV+N + + +F MR ++ N +T +++ CA L G
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
LHG + G+E++S + LL MY KC ++ AR +FD DLVSW +I GY Q+G
Sbjct: 180 QLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNG 239
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
+A LF A P+ +T AS L +L +L + +H IR + D + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSP 428
AL+D+Y KC + A+ I +S D + ++ISG + + + P
Sbjct: 300 ALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
+VT S+ A A L A+ +G LH S + L +VG+A+L+ YAKCG A V
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHG-SIIKTKLDEKCHVGSAILDMYAKCGRLDLACRV 418
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+ + EK+ + W++MI G G ++ LF M E + + V + LSAC++ +
Sbjct: 419 FNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPAL 478
Query: 549 GEGWKC---------------------FYSMCRDFKFVPSM---------KHYVCMVDLL 578
G + Y+ C + F + + ++
Sbjct: 479 HYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAY 538
Query: 579 ARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH--PDK 633
G L+E L M I+PD F + CG + D G M E + P +
Sbjct: 539 GNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPAR 598
Query: 634 ACYYVLVSNLYASDGR 649
+Y V++++ GR
Sbjct: 599 MEHYACVADMFGRAGR 614
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/595 (36%), Positives = 328/595 (55%), Gaps = 61/595 (10%)
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKC 193
CM ++ E + + VL+ C L+ +G KVH I+K G D + LV YA C
Sbjct: 90 CMCQK-SELETKTYGSVLQLCAGLKSFTDGKKVH-SIIKSNSVGVDGALGLKLVSFYATC 147
Query: 194 RDIGSSRQVFD------------------------------------------------- 204
D+ R+VFD
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFEL 207
Query: 205 --ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
+ D++V+SW SMI+GYV N + GL ++ +M ++ + T+ S++ CA L
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H +K E + LLDMY KCG++ A VF+++ ++VSWT+MI GY
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
T+ G D A+KL + + V I S+L A A+ G+L+ G+ VH +E +
Sbjct: 328 TRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNL 387
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACA 441
V NAL+DMYAKC + A +F T KD+I+WN++I L PD+ T+ V+ ACA
Sbjct: 388 FVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGEL----KPDSRTMACVLPACA 443
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
SL A++ G +H Y + G SS+ +V AL++ Y KCG AR++FD + K+ V+W+
Sbjct: 444 SLSALERGKEIHGYILRNGY-SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
MI GYGM G G ++A F++M + ++P+EV F +IL ACSH+G++ +GW+ FY M D
Sbjct: 503 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKND 562
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
F P ++HY CMVDLL+R G L +A EFME +PI PD +++GA L GC Y +L E
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEK 622
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +++ EL P+ YYVL++N+YA +W V ++RE + ++GL K+PGCS +++
Sbjct: 623 VAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEI 677
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 180/370 (48%), Gaps = 40/370 (10%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A +FD + + D S+ MI Y N L + + YK M + D VL C
Sbjct: 204 AFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 159 LRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
+ G VH +K + L+DMY+KC D+ + +VF++ ++NVVSWTSM
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
IAGY ++ + + L +M + V+ + + + S++ ACA+ +L GK +H YI +
Sbjct: 324 IAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
E N + AL+DMY KCG++ A SVF + D++SW MI
Sbjct: 384 ESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI------------------ 425
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHV 396
+ P+ T+A VL A A L L G+ +H +R G D V NALVD+Y KC V
Sbjct: 426 ---GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 482
Query: 397 IADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISA 439
+ AR +F+ KD+++W +I+G D + PD V+ +S++ A
Sbjct: 483 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 542
Query: 440 CASLGAVQVG 449
C+ G ++ G
Sbjct: 543 CSHSGLLEQG 552
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 179/375 (47%), Gaps = 37/375 (9%)
Query: 59 CKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C ++G+L KA H+L I + L+ MY G + A VF+ M + S+
Sbjct: 261 CANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 320
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MI Y + ++ + M K + D + +L AC +D G VH + +K
Sbjct: 321 TSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVH-DYIK 379
Query: 175 VGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
+S FV L+DMYAKC + ++ VF + K+++SW +MI
Sbjct: 380 ANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMI-------------- 425
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
G ++ + T+ ++ ACA L AL +GK +HGYIL+ G + H+ AL+D+YV
Sbjct: 426 -------GELKPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYV 478
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
KCG + AR +FD + S DLVSWT MI GY GY ++A+ F + + A P+ V+ S
Sbjct: 479 KCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFIS 538
Query: 353 VLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETT 407
+L A + G L G M + I LE Y +VD+ ++ ++ A ET
Sbjct: 539 ILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYA---CMVDLLSRTGNLSKAYEFMETL 595
Query: 408 S-EKDVIAWNSIISG 421
D W +++ G
Sbjct: 596 PIAPDATIWGALLCG 610
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 216/512 (42%), Gaps = 102/512 (19%)
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
T+D V + + I + Q + + L ++ +E T GS++ CA L++ G
Sbjct: 61 TIDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDG 118
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV---------------------- 303
K +H I + ++ L L+ Y CG++++ R V
Sbjct: 119 KKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178
Query: 304 -----------------------------FDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
FD+LC D++SW +MI GY +G ++ L +
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
+ + + TI SVL A G L++G+ VHSL I+ E N L+DMY+K
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK 298
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
C + A +FE E++V++W S+I+G + V D V + S+
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSI 358
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ ACA G++ G +H Y K + SN++V AL++ YAKCG ++A VF M K+
Sbjct: 359 LHACARSGSLDNGKDVHDY-IKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKD 417
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
++W+ MIG E++P+ +L AC+ + G +
Sbjct: 418 IISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIHG 456
Query: 557 SMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+ R+ S +H +VDL + G L A + +P D+ + + G G++
Sbjct: 457 YILRN--GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGY 513
Query: 616 FDLGEVMIKKMLE--LHPDKACYYVLVSNLYA 645
+ +M + + PD+ + +S LYA
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSF---ISILYA 542
Score = 45.4 bits (106), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C S +L K H ++ +G ++D+ LV +Y G + AR +FD +P+ D
Sbjct: 438 VLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
S+ VMI Y ++ + + + MR E D F +L AC +++G +
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 220/649 (33%), Positives = 349/649 (53%), Gaps = 26/649 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
+ LL C S S+ H+ + GL +D TKL +Y + + +A +F+ P
Sbjct: 8 VKLLETCCSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTV 67
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRL---KEHDNFVFSKVLKACCELRDIDEGMKV 168
Y + ++R YFL + + + + M + DN+ S LK+C L+ ++ G +
Sbjct: 68 YLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMI 127
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H + K D FV + L+++Y+KC + + +VF E ++VV WTS+I GY QN
Sbjct: 128 HGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSP 187
Query: 228 QEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ L F+RM V + +TL S +ACA+L + G+ +HG++ + G + L +
Sbjct: 188 ELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANS 247
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
+L++Y K G+IR A ++F E+ D++SW++M+ Y +G AL LF + N
Sbjct: 248 ILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELN 307
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
VT+ S L A A NL G+ +H L + G E D TV AL+DMY KC +A +F
Sbjct: 308 RVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFN 367
Query: 406 TTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQV 448
+KDV++W + SG L PDA+ LV +++A + LG VQ
Sbjct: 368 RMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQ 427
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
LHA+ +K G +N ++G +L+ YAKC +A VF MR K+ VTWS++I YG
Sbjct: 428 ALCLHAFVSKSGF-DNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTWSSIIAAYG 486
Query: 509 MQGDGGGSLALFSDMLNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G G +L LF M N +V+PN+V F +ILSACSH G++ EG K F+ M +++ +P+
Sbjct: 487 FHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMVNEYQLMPN 546
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+HY MVDLL R G L++AL+ + MP++ ++GA L C ++ +GE+ +
Sbjct: 547 TEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIGELAALNLF 606
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L P+ A YY L+SN+Y D W ++R L+K+ K G S+V++
Sbjct: 607 LLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVEI 655
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/677 (33%), Positives = 361/677 (53%), Gaps = 33/677 (4%)
Query: 21 LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND 80
L+ +++ + P H S +L +I L+ H GL D
Sbjct: 133 LKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLV------------HRTARTLGLDGD 180
Query: 81 K-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
+ L+ MY + G + AR VFD M D + VM+ Y VE + MR
Sbjct: 181 MFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRA 240
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
E + + L D+ G+++H VK G + V LV MYAKC+ +
Sbjct: 241 SGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDD 300
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
++F ++V+W MI+G VQN + L+LF M++ + + +TL SL+ A
Sbjct: 301 GWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTD 360
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L +QGK LHGYI++ + ++ LV+AL+D+Y KC +R A+SV+D +ID+V + M
Sbjct: 361 LNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTM 420
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I GY +G +A+K+F PN V IASVL A A + + +G+ +HS ++
Sbjct: 421 ISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAY 480
Query: 379 EDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDA------- 430
E + +AL+DMYAKC + + YIF S KD + WNS+IS N P+
Sbjct: 481 EGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFRE 540
Query: 431 ----------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
VT+ SV+SACASL A+ G +H K G + ++++ +AL++ Y KCG
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK-GPIRADLFAESALIDMYGKCG 599
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + A VF++M EKN V+W+++I YG G S++L M E + + V F ++S
Sbjct: 600 NLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVS 659
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
AC+H G V EG + F M +++ P M+H+ CMVDL +RAG+L++A+E + +MP +PD
Sbjct: 660 ACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDA 719
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++GA LH C ++ +L E+ +++ +L P + YYVL+SN+ A GRW V++VR LM
Sbjct: 720 GIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLM 779
Query: 661 KQRGLSKSPGCSLVDLD 677
K + K PG S VD++
Sbjct: 780 KDTKVQKIPGYSWVDVN 796
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 176/601 (29%), Positives = 286/601 (47%), Gaps = 31/601 (5%)
Query: 69 HALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD---FYSFQVMIRWYFL 123
H + GL T+ T+LV MY + A +VF S+P + +IR +
Sbjct: 62 HGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTM 121
Query: 124 NDLYKDIVEFYKCM--RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
Y+ + FY M D+ F V+K+C L I G VH +G D
Sbjct: 122 AGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDM 181
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
FV + L+ MYA + +RQVFD +++ V W M+ GYV+ + LF MR
Sbjct: 182 FVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRAS 241
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
E N TL ++ A L G LH +K G+E + L+ MY KC + D
Sbjct: 242 GCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDG 301
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F + DLV+W MI G Q+G+ D+AL LF D + + P+ VT+ S+L A L
Sbjct: 302 WKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDL 361
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
N G+ +H +R + D +++ALVD+Y KC + A+ +++++ DV+ +++I
Sbjct: 362 NGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMI 421
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
SG L+ + P+AV + SV+ ACAS+ A+++G LH+Y+ K
Sbjct: 422 SGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNA-Y 480
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
YV +AL++ YAKCG + +F + K+ VTW++MI + G+ +L LF +
Sbjct: 481 EGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFRE 540
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M E V+ + V +++LSAC+ + G K + + + ++D+ + G
Sbjct: 541 MCMEGVKYSNVTISSVLSACASLPAIYYG-KEIHGVVIKGPIRADLFAESALIDMYGKCG 599
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLV 640
LE A E+MP + +VS + + + G Y +++ M E D + LV
Sbjct: 600 NLEWAHRVFESMPEKNEVS-WNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALV 658
Query: 641 S 641
S
Sbjct: 659 S 659
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/464 (28%), Positives = 223/464 (48%), Gaps = 37/464 (7%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
VL+ C + G++VH V G D+ + T LV MY R + VF +L +
Sbjct: 45 VLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVF-SSLPR 103
Query: 210 NVVS----WTSMIAGYVQNDCAQEGLVLFNRM--REGFVEGNQITLGSLVTACAKLRALH 263
+ W +I G + L+ + +M + T +V +CA L A+
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H +G++ + + +AL+ MY G + DAR VFD + D V W M+ GY
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYV 223
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
++G A++LF D + + PN T+A LS SA +L G +H+L ++ GLE +
Sbjct: 224 KAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVA 283
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V N LV MYAKC + D +F D++ WN +ISG N
Sbjct: 284 VANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSG 343
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD+VTLVS++ A L G LH Y + + +V++ +AL++ Y KC + A
Sbjct: 344 IRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRN-CVHMDVFLVSALVDIYFKCRAVRMA 402
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ V+D+ + + V S MI GY + G ++ +F +L + ++PN V ++L AC+
Sbjct: 403 QSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASM 462
Query: 546 GMVGEGWKCF-YSMCRDFK---FVPSMKHYVCMVDLLARAGRLE 585
+ G + Y++ ++ +V S ++D+ A+ GRL+
Sbjct: 463 AAMKLGQELHSYALKNAYEGRCYVES-----ALMDMYAKCGRLD 501
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 226/630 (35%), Positives = 346/630 (54%), Gaps = 22/630 (3%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP-NPDFYSFQVMIRWYFLND 125
HAL + GL D LV+MYG FG V AR VFD + S+ ++ Y ND
Sbjct: 122 LHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKND 181
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
V+ + M + + F FS V+ AC RD++ G KVH +++ G D F
Sbjct: 182 RCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTAN 241
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LVDMY+K DI + VF + + +VVSW + I+G V + Q L L +M+ +
Sbjct: 242 ALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N TL S++ ACA A + G+ +HG+++K + ++++ L+DMY K G + DA+ VF
Sbjct: 302 NVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVF 361
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + DLV W A+I G + +AL LF + F N T+A+VL ++A L ++
Sbjct: 362 DWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAIS 421
Query: 365 MGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
R VH+L +LG L D V+N L+D Y KC + A +FE D+IA+ S+I+ L
Sbjct: 422 DTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALS 481
Query: 424 D-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
+ PD L S+++ACASL A + G +HA+ K+ +S +V
Sbjct: 482 QCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS-DV 540
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ G AL+ YAKCG + A + F + EK V+WSAMIGG G G +L +F M++E
Sbjct: 541 FAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDE 600
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
+ PN + T++L AC+H G+V E + F SM F + +HY CM+DLL RAG+L++
Sbjct: 601 HISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDD 660
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
A+E + +MP + + +++GA L ++ +LG + +K+ L P+K+ +VL++N YAS
Sbjct: 661 AMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLLANTYAS 720
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
G W V +VR+LMK + K P S V+L
Sbjct: 721 AGMWDDVAKVRKLMKDSKVKKEPAMSWVEL 750
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 170/606 (28%), Positives = 285/606 (47%), Gaps = 28/606 (4%)
Query: 46 SLPSI-PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFD 104
SL +I P L +S HA L+ GL N L+S Y AR VFD
Sbjct: 3 SLETIGPLLTRYAATQSLLQGAHIHAHLLKSGLFAVFRN-HLLSFYSKCRLPGSARRVFD 61
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
+P+P S+ ++ Y N + +D + ++ MR + FV VLK D
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCA---PDAGF 118
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET-LDKNVVSWTSMIAGYV 222
G ++H + G G D FV LV MY + +R VFDE ++N VSW +++ YV
Sbjct: 119 GTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYV 178
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
+ND + +F M G V+ N+ +V AC R L G+ +H +++ G + +
Sbjct: 179 KNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVF 238
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
AL+DMY K G+IR A VF ++ D+VSW A I G G+ AL+L K +
Sbjct: 239 TANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
PN T++S+L A A G N+GR +H ++ + D + LVDMYAK ++ DA+
Sbjct: 299 LVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAK 358
Query: 402 YIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLG 444
+F+ ++D++ WN++ISG + + TL +V+ + ASL
Sbjct: 359 KVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLE 418
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
A+ +HA + K G LS + +V L++ Y KC A VF+ + + +++MI
Sbjct: 419 AISDTRQVHALAEKLGFLSDS-HVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMI 477
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G ++ LF +ML + + P+ + +++L+AC+ +G + + + +F
Sbjct: 478 TALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR-QF 536
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
+ + +V A+ G +E+A +P E V + A + G + +
Sbjct: 537 MSDVFAGNALVYTYAKCGSIEDADLAFSGLP-EKGVVSWSAMIGGLAQHGHGKRALDVFH 595
Query: 625 KMLELH 630
+M++ H
Sbjct: 596 RMVDEH 601
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/627 (33%), Positives = 344/627 (54%), Gaps = 26/627 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ +Y G V AR +FD N S+ VMI Y L ++ + M++ E D
Sbjct: 85 LLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPD 144
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F F +L AC ++ G +VH +++ G ++ V L+ MYAKC + +R+VFD
Sbjct: 145 KFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFD 204
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++ VSWT++ Y ++ AQE L ++ M + V ++IT ++++AC L AL +
Sbjct: 205 AMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEK 264
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H I++ + + TAL MY+KCG ++DAR VF+ L + D+++W MI G
Sbjct: 265 GKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVD 324
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTV 383
SG ++A +F P+ VT ++LSA A+ G L G+ +H+ ++ GL D
Sbjct: 325 SGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRF 384
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
NAL++MY+K + DAR +F+ ++DV++W +++ G L V
Sbjct: 385 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGV 444
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ +T + V+ AC++ A++ G +HA K G+ + ++ V AL++ Y KCG + A
Sbjct: 445 EANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFA-DLAVANALMSMYFKCGSVEDAI 503
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
V + M ++ VTW+ +IGG G G +L F M +EE++PN F ++SAC
Sbjct: 504 RVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRN 563
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG + F SM +D+ VP+ KHY CMVD+LARAG L EA + + MP +P +++GA
Sbjct: 564 LVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGAL 623
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C + ++GE ++ L+L P A YV +S +YA+ G W V ++R+LMK+RG+
Sbjct: 624 LAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVK 683
Query: 667 KSPGCSLVDLD------IANDFSFSRV 687
K PG S +++ +A D S R
Sbjct: 684 KEPGRSWIEVAGEVHSFVAGDQSHPRT 710
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 289/534 (54%), Gaps = 27/534 (5%)
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLV 187
D++++ + ++ + D++ + K+L++C + +D+ G +VH I++ G P+ +++ L+
Sbjct: 30 DVLQY---LHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLL 86
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
+Y C + +R++FD+ +K+VVSW MI+GY QE LF M++ +E ++
Sbjct: 87 KLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKF 146
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T S+++AC+ AL+ G+ +H +++ G+ N+ + AL+ MY KCG++RDAR VFD +
Sbjct: 147 TFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAM 206
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
S D VSWT + Y +SGY ++LK + P+ +T +VLSA L L G+
Sbjct: 207 ASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGK 266
Query: 368 MVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN- 425
+H+ + D V AL MY KC + DAR +FE +DVIAWN++I GL D+
Sbjct: 267 QIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSG 326
Query: 426 ----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
V+PD VT ++++SACA G + G +HA + K GL+ S+V G
Sbjct: 327 QLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLV-SDVRFG 385
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
AL+N Y+K G + AR VFD M +++ V+W+A++GGY G S + F ML + V+
Sbjct: 386 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVE 445
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
N++ + +L ACS+ + G + + + F + ++ + + G +E+A+
Sbjct: 446 ANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFA-DLAVANALMSMYFKCGSVEDAIR 504
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSR--FDLGEVMIKKMLELHPDKACYYVLVS 641
E M DV + + G R L + + K E+ P+ + ++S
Sbjct: 505 VSEGMSTR-DVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMS 557
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 140/485 (28%), Positives = 238/485 (49%), Gaps = 26/485 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPN 108
+++L C S +L + H ++ GL N+ L+SMY G V+ AR VFD+M +
Sbjct: 149 VSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMAS 208
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D S+ + Y + ++ ++ Y M + + VL AC L +++G ++
Sbjct: 209 RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQI 268
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +IV+ D V T L MY KC + +R+VF+ +++V++W +MI G V +
Sbjct: 269 HAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQL 328
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+E +F+RM + V +++T ++++ACA+ L GK +H +K G+ + AL
Sbjct: 329 EEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNAL 388
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++MY K G+++DAR VFD + D+VSWTA++ GY G ++ F N
Sbjct: 389 INMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANK 448
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFET 406
+T VL A + L G+ +H+ ++ G+ D V NAL+ MY KC + DA + E
Sbjct: 449 ITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEG 508
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
S +DV+ WN++I GL N + P+A T V+V+SAC V+ G
Sbjct: 509 MSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEG 568
Query: 450 SSLHAYSTKQ-GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMIGGY 507
A K G++ + + +++ A+ G A V M K + W A++
Sbjct: 569 RRQFASMRKDYGIVPTEKHYA-CMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAAC 627
Query: 508 GMQGD 512
G+
Sbjct: 628 RAHGN 632
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/551 (38%), Positives = 316/551 (57%), Gaps = 23/551 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ +LK C D+ G VH ++ G +S T L +MY KCR +R+VFD
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR--EGFVEGNQITLGSLVTACAKLRALHQ 264
++ V+W +++AGY +N + RM+ EG + +TL S++ ACA RALH
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ +H + L+ G++ ++ TA+LD Y KCG + AR+VFD + + VSW AMI GY
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +A+ LF ++ + L A +LG L+ R VH L +R+GL + +V
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257
Query: 384 INALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGLD-----------------DN 425
NAL+ YAKC A +F E ++K I+WN++I G +N
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V PD+ TLVSVI A A + +H YS + L +VYV TAL++ Y+KCG A
Sbjct: 318 VRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQL-DQDVYVLTALIDMYSKCGRVSIA 376
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R +FD+ R+++ +TW+AMI GYG G G ++ LF +M PNE F ++L+ACSH
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG K F SM +D+ P M+HY MVDLL RAG+L+EA F++NMPIEP +S++GA
Sbjct: 437 GLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGA 496
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C L+ +L E + + EL P++ Y+VL++N+YA+ W V +VR M+++GL
Sbjct: 497 MLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGL 556
Query: 666 SKSPGCSLVDL 676
K+PG S++ L
Sbjct: 557 QKTPGWSIIQL 567
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 150/514 (29%), Positives = 246/514 (47%), Gaps = 31/514 (6%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
LL LC + L +A HA L GL ++ +T L +MY AR VFD MP+ D
Sbjct: 22 LLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRD 81
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL--KEHDNFVFSKVLKACCELRDIDEGMKV 168
++ ++ Y N L +E M+ + D+ VL AC + R + +V
Sbjct: 82 RVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACREV 141
Query: 169 HCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H ++ G + V T ++D Y KC + ++R VFD +N VSW +MI GY N A
Sbjct: 142 HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGNA 201
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E + LF RM + V+ ++ + + AC +L L + + +H ++++G+ N + AL
Sbjct: 202 TEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNAL 261
Query: 288 LDMYVKCGNIRDARSVFDELCSIDL-VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
+ Y KC A VF+EL + +SW AMI+G+TQ+ P+ A +LF + + P+
Sbjct: 262 ITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPD 321
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFE 405
T+ SV+ A A + + R +H IR L +D V+ AL+DMY+KC ++ AR +F+
Sbjct: 322 SFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFD 381
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
+ ++ VI WN++I G + P+ T +SV++AC+ G V
Sbjct: 382 SARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDE 441
Query: 449 GSSLHAYSTKQ-GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
G A K GL + GT +++ + G A M E + AM+G
Sbjct: 442 GQKYFASMKKDYGLEPGMEHYGT-MVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGA 500
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + LA S + E+ P E ++ +L+
Sbjct: 501 CKLHKN--VELAEESAQIIFELGPEEGVYHVLLA 532
>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/614 (35%), Positives = 344/614 (56%), Gaps = 21/614 (3%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KLV+ Y S G ++ AR VFD +P P M+ Y N+ Y D +E K M + E
Sbjct: 94 KLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEF 153
Query: 145 DNFVFSKVLKACCELRDIDEGMKV-HCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D++ + LKAC L D + GM+V + K F+ + +++ K DI ++ F
Sbjct: 154 DSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIMCAQFFF 213
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ ++K+VV W MI G++Q +EG LF M +E + +T+ SL+ +C ++R L
Sbjct: 214 HQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLT 273
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +HG++L G+ ++ ++T L+DMY K G++ AR +F+ + S +LVSW MI GY
Sbjct: 274 FGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYV 333
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q+G + L+LF D + T+ S++ ++ +L+ G+++H R GL+ +
Sbjct: 334 QNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLV 393
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
+ A+VD+YAKC +A A +FE K+VI+W +++ GL N
Sbjct: 394 LPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNER 453
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V+ +A+TLVS++ C LG ++ G S+HA T+ +S V V TAL++ YAKC SA
Sbjct: 454 VTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHF-ASEVVVMTALIDMYAKCSKINSA 512
Query: 486 RMVFD-AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
MVF + K+ + +++MI GYGM G G +L ++ M E +QPNE F ++LSACSH
Sbjct: 513 EMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSH 572
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+G+V EG F +M +D P+ K Y C+VDLL+RAGRL +A E + MP P +
Sbjct: 573 SGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILE 632
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
L+GC L+ +LG + ++L L Y+ +SN+YA RW V VR LM ++
Sbjct: 633 TLLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQE 692
Query: 665 LSKSPGCSLVDLDI 678
+ K PG S ++++I
Sbjct: 693 IKKIPGYSSIEVNI 706
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 237/484 (48%), Gaps = 24/484 (4%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D F++ LV Y+ + ++R+VFDE V +M+ GY+QN+ + + L M
Sbjct: 88 DQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMS 147
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+E + T + AC L G + G + G+ L +++L+ VK G+I
Sbjct: 148 RCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLVKTGDIM 207
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
A+ F ++ D+V W MI G+ Q G + LF D + P+ VT+ S++ +
Sbjct: 208 CAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCG 267
Query: 359 QLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
++ NL G+ +H + G+ D V+ L+DMY K + AR+IFE +++++WN
Sbjct: 268 EMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNV 327
Query: 418 IISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+ISG + D+V D+ T+VS+I C+ + G LH + ++G
Sbjct: 328 MISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRG 387
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
L N+ + TA+++ YAKCG A VF+ M+ KN ++W+AM+ G G +L LF
Sbjct: 388 -LDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLF 446
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
M NE V N + +++ C+ G++ EG ++ R F F + ++D+ A+
Sbjct: 447 DQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTR-FHFASEVVVMTALIDMYAK 505
Query: 581 AGRLEEALEFMENMPIEP-DVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYY 637
++ A E + + P DV L+ + + G G++ + +M L P+++ +
Sbjct: 506 CSKINSA-EMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFV 564
Query: 638 VLVS 641
L+S
Sbjct: 565 SLLS 568
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 165/323 (51%), Gaps = 9/323 (2%)
Query: 53 LNLLGLCKSTGSL------KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDS 105
+ ++ L +S G + K H ++ G++ D + T L+ MY G V+ AR +F++
Sbjct: 257 VTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFEN 316
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP+ + S+ VMI Y N L + + ++ + D+ +++ C D+D G
Sbjct: 317 MPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGG 376
Query: 166 MKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H I + G + VL T +VD+YAKC + + VF+ +KNV+SWT+M+ G QN
Sbjct: 377 KILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQN 436
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
A++ L LF++M+ V N +TL SLV C L L +G+ +H + + ++
Sbjct: 437 GHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVM 496
Query: 285 TALLDMYVKCGNIRDARSVFD-ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
TAL+DMY KC I A VF L D++ + +MI GY G KAL ++
Sbjct: 497 TALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGL 556
Query: 344 FPNHVTIASVLSASAQLGNLNMG 366
PN T S+LSA + G + G
Sbjct: 557 QPNESTFVSLLSACSHSGLVEEG 579
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/648 (32%), Positives = 353/648 (54%), Gaps = 21/648 (3%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ LN K+ G+ + H+ + G ++D + L+SMY G + AR +F++MP
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPK 448
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D S+ +I Y + + ++ YK M+ + F +L AC +G +
Sbjct: 449 RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMI 508
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +I++ G + + L++MY +C I ++ VF+ T ++++SW SMIAG+ Q+
Sbjct: 509 HEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSY 568
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ LF M++ +E ++IT S++ C AL G+ +H I++ G++++ +L AL
Sbjct: 569 EAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNAL 628
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++MY++CG+++DA VF L +++SWTAMI G+ G KA +LF + F P
Sbjct: 629 INMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVK 688
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T +S+L A L+ G+ V + + G E D V NAL+ Y+K + DAR +F+
Sbjct: 689 STFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDK 748
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+D+++WN +I+G N V + + VS+++AC+S A++ G
Sbjct: 749 MPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEG 808
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA K+ + +V VG AL++ YAKCG + A+ VFD EKN VTW+AMI Y
Sbjct: 809 KRVHAEIVKRKM-QGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQ 867
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G +L F+ M E ++P+ FT+ILSAC+H+G+V EG + F S+ P+++
Sbjct: 868 HGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIE 927
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY C+V LL RAGR +EA + MP PD +++ L C ++ L E L+L
Sbjct: 928 HYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKL 987
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ YVL+SN+YA+ GRW V ++R +M+ RG+ K PG S +++D
Sbjct: 988 NARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVD 1035
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/521 (28%), Positives = 268/521 (51%), Gaps = 26/521 (4%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
+ R E + + +++ C R + E ++H ++V+ G GPD F+ L++MY KCR +
Sbjct: 74 QPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 133
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ QVF + ++V+SW S+I+ Y Q ++ LF M+ ++IT S++TAC
Sbjct: 134 SDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTAC 193
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
L GK +H I++ G + + + +LL+MY KC ++ AR VF + D+VS+
Sbjct: 194 CSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYN 253
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
M+ Y Q Y ++ + LF P+ VT ++L A L+ G+ +H L +
Sbjct: 254 TMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNE 313
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
GL D V AL M+ +C +A A+ E +++DV+ +N++I+ L
Sbjct: 314 GLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQY 373
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
D V + T +SV++AC++ A+ G +H++ ++ G SS+V +G +L++ YA+
Sbjct: 374 YQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVG-HSSDVQIGNSLISMYAR 432
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CGD AR +F+ M +++ ++W+A+I GY + D G ++ L+ M +E V+P V F +
Sbjct: 433 CGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHL 492
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIE 597
LSAC+++ +G + R + S H ++++ R G + EA E
Sbjct: 493 LSACTNSSAYSDGKMIHEDILRS--GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR 550
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACY 636
D+ + + + G + ++ + +M + L PDK +
Sbjct: 551 -DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITF 590
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 163/621 (26%), Positives = 289/621 (46%), Gaps = 54/621 (8%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
+S K HA ++ G+ D + L++MY V A VF MP D S+ +I
Sbjct: 96 RSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLI 155
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
Y K + ++ M+ + +L ACC +++ G K+H +I++ G
Sbjct: 156 SCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQ 215
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D V L++MY KC D+ S+RQVF ++VVS+ +M+ Y Q +E + LF +M
Sbjct: 216 RDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQM 275
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
+ +++T +L+ A L +GK +H + G+ + + TAL M+V+CG++
Sbjct: 276 SSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDV 335
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
A+ + D+V + A+I Q G+ ++A + + + N T SVL+A
Sbjct: 336 AGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNAC 395
Query: 358 AQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ L G ++HS +G D + N+L+ MYA+C + AR +F T ++D+I+WN
Sbjct: 396 STSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWN 455
Query: 417 SIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+II+G + V P VT + ++SAC + A G +H +
Sbjct: 456 AIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRS 515
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G + SN ++ AL+N Y +CG A+ VF+ R ++ ++W++MI G+ G + L
Sbjct: 516 G-IKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKL 574
Query: 520 FSDMLNEEVQPNEVIFTTILSACSH----------------TGM-----VGEGWKCFYSM 558
F +M E ++P+++ F ++L C + +G+ +G Y
Sbjct: 575 FLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIR 634
Query: 559 CRD----FKFVPSMKH-----YVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAF 606
C ++ S++H + M+ A G +A E M+N +P S F +
Sbjct: 635 CGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSI 694
Query: 607 LHGCGLYSRFDLGEVMIKKML 627
L C + D G+ +I +L
Sbjct: 695 LKACMSSACLDEGKKVIAHIL 715
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 231/693 (33%), Positives = 371/693 (53%), Gaps = 36/693 (5%)
Query: 12 SRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHAL 71
S +KP F+ + +TP ++D+T + P + L + K H
Sbjct: 40 SAIQKP------FATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGF 93
Query: 72 LIVDGLTNDKCNTKL---VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
L+ +N L Y + A +FD M + +S+ V+I N L+
Sbjct: 94 LLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFL 153
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLV 187
D EF+ M+ + D F +S +L+ C L I+ G VH +IV G +FV T L+
Sbjct: 154 DGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALL 213
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQ 246
+MYAK ++I S +VF+ + NVVSW +MI G+ ND + LF RM EG Q
Sbjct: 214 NMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQ 273
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+G + A LR +++ K + GY L++G++ N+ + TAL+DM KCG++++ARS+F+
Sbjct: 274 TFIG-VAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNS 332
Query: 307 ---LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
C + W AMI GY +SG+ +KAL+LF D + +H T SV +A A L L
Sbjct: 333 HFITCRFN-APWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCL 391
Query: 364 NMGRMVHSLGIRLGLE-DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
++G+ VH+ I+ GLE +Y I NA+ + YAKC + D R +F ++D+I+W S+++
Sbjct: 392 SLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTA 451
Query: 422 LD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ ++P+ T SV+ +CA+L ++ G +H K GL
Sbjct: 452 YSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGL-DM 510
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ + +AL++ YAKCG A+ VF+ + +TV+W+A+I G+ G +L LF M+
Sbjct: 511 DKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMV 570
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
V+PN V F +L ACSH G+V EG + F M + + VP M+HY C+VDLL+R G L
Sbjct: 571 QLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHL 630
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+A+EF+ MP+EP+ ++ L C ++ +LGE+ +K+L + + YVL+SN Y
Sbjct: 631 NDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTY 690
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
G + +R LMK++G+ K PGCS + ++
Sbjct: 691 IESGSYKDGLSLRHLMKEQGVKKEPGCSWISVN 723
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 217/627 (34%), Positives = 342/627 (54%), Gaps = 41/627 (6%)
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL--YKDIVEFYKCMRKRLKEH 144
+ + G+++ A + + P PD DL +D + ++ E
Sbjct: 75 ICRFCELGNLRRAMELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEV 134
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKC----------- 193
D + SK++ D+ EG ++ KV F+ L++ YAK
Sbjct: 135 DGVLGSKLVFMYVTCGDLREGRRI---FDKVANEKVFLWNLLMNGYAKIGNFRESLSLFK 191
Query: 194 -------RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
R + S+R++FDE D++V+SW SMI+GYV N +++GL LF +M + +
Sbjct: 192 RMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDL 251
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
T+ S+V C+ L G+ LHGY +K L LLDMY K GN+ A VF+
Sbjct: 252 ATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFET 311
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ +VSWT+MI GY + G D +++LF + + P+ TI ++L A A G L G
Sbjct: 312 MGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENG 371
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+ VH+ ++ D V NAL+DMYAKC + DA +F KD+++WN++I G
Sbjct: 372 KDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKN 431
Query: 422 ------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
+ N P+++T+ ++ ACASL A++ G +H + + G S + +V
Sbjct: 432 SLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRNGF-SLDRHVA 490
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
AL++ Y KCG AR++FD + EK+ V+W+ MI GYGM G G ++A F++M N ++
Sbjct: 491 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
P+EV F +IL ACSH+G++ EGW F M + P +HY C+VDLLARAG L +A +
Sbjct: 551 PDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK 610
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
F++ MPIEPD +++GA L GC +Y L E + + + EL P+ YYVL++N+YA +
Sbjct: 611 FIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEK 670
Query: 650 WIRVNQVRELMKQRGLSKSPGCSLVDL 676
W V ++RE + +RGL K+PGCS +++
Sbjct: 671 WEEVKKLRERIGRRGLRKNPGCSWIEI 697
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/374 (33%), Positives = 186/374 (49%), Gaps = 15/374 (4%)
Query: 59 CKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C +TG L +A H I + N L+ MY G++ A VF++M S+
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSW 320
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MI Y L V + M K D F + +L AC ++ G VH I +
Sbjct: 321 TSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKE 380
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
D FV L+DMYAKC +G + VF E K++VSW +MI GY +N E L L
Sbjct: 381 NKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNL 440
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
F M+ + N IT+ ++ ACA L AL +G+ +HG+IL+ G ++ H+ AL+DMY+K
Sbjct: 441 FVEMQYN-SKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLK 499
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CG + AR +FD + DLVSWT MI GY GY +A+ F + + + P+ V+ S+
Sbjct: 500 CGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISI 559
Query: 354 LSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA-RYIFETT 407
L A + G L+ G M ++ I E Y I VD+ A+ ++ A ++I
Sbjct: 560 LYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACI---VDLLARAGNLSKAYKFIKMMP 616
Query: 408 SEKDVIAWNSIISG 421
E D W +++ G
Sbjct: 617 IEPDATIWGALLCG 630
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 16/189 (8%)
Query: 44 FHSLP-SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKY 98
++S P SI +L C S +L + H ++ +G + D+ LV MY G +
Sbjct: 446 YNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGL 505
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
AR +FD +P D S+ VMI Y ++ + + + MR E D F +L AC
Sbjct: 506 ARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSH 565
Query: 159 LRDIDEG------MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFD-ETLDKNV 211
+DEG M+ +C I P S +VD+ A+ ++ + + ++ +
Sbjct: 566 SGLLDEGWGFFNMMRNNCCI----EPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDA 621
Query: 212 VSWTSMIAG 220
W +++ G
Sbjct: 622 TIWGALLCG 630
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 245/723 (33%), Positives = 370/723 (51%), Gaps = 77/723 (10%)
Query: 25 SYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNT 84
SY ++ T TF + S P+IP ++LL CK+ + K H + V G T + +
Sbjct: 8 SYLSRILITSVHFYSTFTT--SPPTIPLISLLRQCKTLINAKLAHQQIFVHGFT--EMFS 63
Query: 85 KLVSMYGSFGHVKYARSVFDSM--PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
V Y G A S+ + + + + +IR L D + FY M++
Sbjct: 64 YAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGW 123
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D++ F VLKAC E+ + G VH + G G + F+ +V MY +C + + Q
Sbjct: 124 LPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQ 183
Query: 202 VFDETLDK---NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF---VEGNQITLGSLVTA 255
+FDE L++ ++VSW S++A YVQ ++ L + RM + + + ITL +++ A
Sbjct: 184 MFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPA 243
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA + AL GK +HG+ ++ G+ + + AL+ MY KC + +A VF+ + D+VSW
Sbjct: 244 CASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSW 303
Query: 316 TAMIVGYTQSGYPDKALKLFT-----DKK-----WA----------------DFF----- 344
AM+ GY+Q G D AL LF D K W+ D F
Sbjct: 304 NAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQL 363
Query: 345 ----PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--------EDYTVINALVDMYA 392
PN VT+AS+LS A +G L G+ H+ I+ L +D V+N L+DMYA
Sbjct: 364 YGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYA 423
Query: 393 KCHVIADARYIFETTSEKD--VIAWNSIISGLDDN-------------------VSPDAV 431
KC AR IF++ KD V+ W +I G + + P+A
Sbjct: 424 KCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAF 483
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
TL + ACA LG +++G LHAY+ + S +YVG L++ Y+K GD +AR VFD
Sbjct: 484 TLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDN 543
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
M+ +N V+W++++ GYGM G G +L LF M + + F +L ACSH+GMV +G
Sbjct: 544 MKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQG 603
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCG 611
F+ M + F P +HY CMVDLL RAGRL EA+E ++NM +EP ++ A L
Sbjct: 604 MIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASR 663
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 671
+++ +LGE K+ EL + Y L+SNLYA+ RW V ++R LMK G+ K PGC
Sbjct: 664 IHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGC 723
Query: 672 SLV 674
S +
Sbjct: 724 SWI 726
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/693 (33%), Positives = 371/693 (53%), Gaps = 36/693 (5%)
Query: 12 SRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHAL 71
S +KP F+ + +TP ++D+T + P + L + K H
Sbjct: 40 SAIQKP------FATSGIKTPNSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGF 93
Query: 72 LIVDGLTNDKCNTKL---VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
L+ +N L Y + A +FD M + +S+ V+I N L+
Sbjct: 94 LLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFL 153
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLV 187
D EF+ M+ + D F +S +L+ C L I+ G VH +IV G +FV T L+
Sbjct: 154 DGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALL 213
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQ 246
+MYAK ++I S +VF+ + NVVSW +MI G+ ND + LF RM EG Q
Sbjct: 214 NMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQ 273
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+G + A LR +++ K + GY L++G++ N+ + TAL+DM KCG++++ARS+F+
Sbjct: 274 TFIG-VAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNS 332
Query: 307 ---LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
C + W AMI GY +SG+ +KAL+LF D + +H T SV +A A L L
Sbjct: 333 HFITCRFN-APWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCL 391
Query: 364 NMGRMVHSLGIRLGLE-DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
++G+ VH+ I+ GLE +Y I NA+ + YAKC + D R +F ++D+I+W S+++
Sbjct: 392 SLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTA 451
Query: 422 LD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ ++P+ T SV+ +CA+L ++ G +H K GL
Sbjct: 452 YSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGL-DM 510
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ + +AL++ YAKCG A+ VF+ + +TV+W+A+I G+ G +L LF M+
Sbjct: 511 DKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMV 570
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
V+PN V F +L ACSH G+V EG + F M + + VP M+HY C+VDLL+R G L
Sbjct: 571 QLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHL 630
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+A+EF+ MP+EP+ ++ L C ++ +LGE+ +K+L + + YVL+SN Y
Sbjct: 631 NDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTY 690
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
G + +R +MK++G+ K PGCS + ++
Sbjct: 691 IESGSYKDGLSLRHVMKEQGVKKEPGCSWISVN 723
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/549 (38%), Positives = 325/549 (59%), Gaps = 21/549 (3%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ +LK C D+ G VH ++ G ++ T L +MYAKCR +R+VFD
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE-GNQITLGSLVTACAKLRALHQG 265
++ V+W +++AGY +N A+ + + RM+E E + ITL S++ ACA RAL
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ H + ++ G+E ++ TA+LD Y KCG+IR AR VFD + + + VSW AMI GY Q+
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
G +AL LF V++ + L A +LG L+ G VH L +R+GL+ + +V+
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVS 427
NAL+ MY+KC + A ++F+ + ++WN++I G +NV
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD+ TLVSVI A A + +H YS + L +VYV TAL++ YAKCG AR+
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHL-DQDVYVLTALIDMYAKCGRVNIARI 419
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F++ RE++ +TW+AMI GYG G G ++ LF +M + + PNE F ++LSACSH G+
Sbjct: 420 LFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGL 479
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG + F SM D+ P M+HY MVDLL RAG+L+EA F++ MP++P +S++GA L
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C L+ +L E +K+ EL P + Y+VL++N+YA+ W V +VR M++ GL K
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQK 599
Query: 668 SPGCSLVDL 676
+PG S++ L
Sbjct: 600 TPGWSIIQL 608
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 258/531 (48%), Gaps = 33/531 (6%)
Query: 40 TFASFHSLPSIPCL----NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYG 91
F + S + P L +LL LC + G L +A HA L G+ ++ T L +MY
Sbjct: 46 AFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYA 105
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH-DNFVFS 150
AR VFD MP D ++ ++ Y N L + +E M++ E D+
Sbjct: 106 KCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLV 165
Query: 151 KVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDK 209
VL AC R + + H ++ G + V T ++D Y KC DI ++R VFD K
Sbjct: 166 SVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTK 225
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
N VSW +MI GY QN ++E L LFNRM E V+ +++ + + AC +L L +G +H
Sbjct: 226 NSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVH 285
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
+++IG++ N ++ AL+ MY KC + A VFDEL VSW AMI+G Q+G +
Sbjct: 286 ELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSE 345
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALV 388
A++LFT + + P+ T+ SV+ A A + + R +H IRL L +D V+ AL+
Sbjct: 346 DAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALI 405
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAV 431
DMYAKC + AR +F + E+ VI WN++I G + + P+
Sbjct: 406 DMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNET 465
Query: 432 TLVSVISACASLGAVQVGSS-LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
T +SV+SAC+ G V G + GL + GT +++ + G A
Sbjct: 466 TFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGT-MVDLLGRAGKLDEAWAFIQ 524
Query: 491 AMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
M + + AM+G + + LA S E+ P E ++ +L+
Sbjct: 525 KMPMDPGLSVYGAMLGACKLHKN--VELAEESAQKIFELGPQEGVYHVLLA 573
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 173/367 (47%), Gaps = 48/367 (13%)
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
AL F A P T S+L A G+L GR VH+ G++ + AL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------------DDNVSPDAV 431
MYAKC ADAR +F+ +D +AWN++++G ++ PD++
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
TLVSV+ ACA+ A+ HA++ + G L V V TA+L+ Y KCGD ++AR+VFD
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSG-LEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
M KN+V+W+AMI GY GD +LALF+ M+ E V +V L AC G + EG
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS----LFGAFL 607
+ + R ++ ++ + ++ R++ A + + VS + G
Sbjct: 282 MRVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340
Query: 608 HGCG-----LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA----SD---GRWIRVNQ 655
+GC L++R L V PD + LVS + A SD RWI
Sbjct: 341 NGCSEDAVRLFTRMQLENV--------KPDS---FTLVSVIPALADISDPLQARWIHGYS 389
Query: 656 VRELMKQ 662
+R + Q
Sbjct: 390 IRLHLDQ 396
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/627 (33%), Positives = 340/627 (54%), Gaps = 26/627 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ +Y G V AR +FD N S+ VMI Y L ++ + M++ E D
Sbjct: 69 LLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPD 128
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F F +L AC ++ G ++H +++ G D+ V L+ MYAKC + +R+VFD
Sbjct: 129 KFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFD 188
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++ VSWT++ Y ++ +E L ++ M + V ++IT ++++AC L AL +
Sbjct: 189 AMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEK 248
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H +I++ + + TAL MY+KCG +DAR VF+ L D+++W MI G+
Sbjct: 249 GKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVD 308
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTV 383
SG ++A F P+ T +VLSA A+ G L G+ +H+ + GL D
Sbjct: 309 SGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRF 368
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
NAL++MY+K + DAR +F+ ++DV++W +++ L V
Sbjct: 369 GNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGV 428
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ +T + V+ AC++ A++ G +HA K GLL+ ++ V AL++ Y KCG + A
Sbjct: 429 KANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLA-DLAVTNALMSMYFKCGSVEDAI 487
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ M ++ VTW+ +IGG G G G +L + M +E ++PN F +LSAC
Sbjct: 488 RVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCN 547
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG + F M +D+ VP+ KHY CMVD+LARAG L EA + + +P++P +++GA
Sbjct: 548 LVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGAL 607
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ ++GE + L+L P A YV +S +YA+ G W V ++R+ MK+RG+
Sbjct: 608 LAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVK 667
Query: 667 KSPGCSLVDLD------IANDFSFSRV 687
K PG S +++ +A D S R
Sbjct: 668 KEPGRSWIEIAGEVHSFVARDQSHPRT 694
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/506 (31%), Positives = 274/506 (54%), Gaps = 25/506 (4%)
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLV 187
D++++ + ++ + D++ + K+L++C + +D+ G +VH I++ G P+ ++ L+
Sbjct: 14 DVLQY---LHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLL 70
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
+YA C + +RQ+FD+ +K+VVSW MI+GY AQE LF M++ +E ++
Sbjct: 71 KLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKF 130
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T S+++AC+ L+ G+ +H +++ G+ ++ + AL+ MY KCG++RDAR VFD +
Sbjct: 131 TFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAM 190
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
S D VSWT + Y +SGY +++LK + P+ +T +VLSA L L G+
Sbjct: 191 ASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGK 250
Query: 368 MVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
+H+ + D V AL MY KC DAR +FE S +DVIAWN++I G
Sbjct: 251 QIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSG 310
Query: 422 ------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
L++ V+PD T +V+SACA G + G +HA + K GL+ S+V G
Sbjct: 311 QLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLV-SDVRFG 369
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
AL+N Y+K G + AR VFD M +++ V+W+ ++G Y S F ML + V+
Sbjct: 370 NALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVK 429
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
N++ + +L ACS+ + G K ++ + + ++ + + G +E+A+
Sbjct: 430 ANKITYMCVLKACSNPVALKWG-KEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIR 488
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSR 615
E M + DV + + G G R
Sbjct: 489 VFEGMSMR-DVVTWNTLIGGLGQNGR 513
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 216/470 (45%), Gaps = 29/470 (6%)
Query: 38 DQTFASFHSL------PS-IPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKL 86
+++ ++H++ PS I +N+L C S +L K HA ++ +D + +T L
Sbjct: 212 EESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTAL 271
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
MY G K AR VF+ + D ++ MIR + + ++ + M + D
Sbjct: 272 TKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDR 331
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
++ VL AC + G ++H K G D L++MY+K + +RQVFD
Sbjct: 332 ATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDR 391
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
++VVSWT+++ Y D E F +M + V+ N+IT ++ AC+ AL G
Sbjct: 392 MPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWG 451
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
K +H ++K G+ + + AL+ MY KCG++ DA VF+ + D+V+W +I G Q+
Sbjct: 452 KEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQN 511
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN 385
G +AL+ + K PN T +VLSA + GR + + DY ++
Sbjct: 512 GRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSK----DYGIVP 567
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGA 445
++A A ++ E +DVI L + P A ++++AC
Sbjct: 568 TEKHYACMVDILARAGHLREA---EDVI--------LTIPLKPSAAMWGALLAACRIHCN 616
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V++G + K ++ +YV +L YA G + + M+E+
Sbjct: 617 VEIGERAAEHCLKLEPQNAGLYV--SLSAIYAAAGMWRDVAKLRKFMKER 664
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/549 (38%), Positives = 325/549 (59%), Gaps = 21/549 (3%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ +LK C D+ G VH ++ G ++ T L +MYAKCR +R+VFD
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE-GNQITLGSLVTACAKLRALHQG 265
++ V+W +++AGY +N A+ + + RM+E E + ITL S++ ACA RAL
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ H + ++ G+E ++ TA+LD Y KCG+IR AR VFD + + + VSW AMI GY Q+
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
G +AL LF V++ + L A +LG L+ G VH L +R+GL+ + +V+
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVS 427
NAL+ MY+KC + A ++F+ + ++WN++I G +NV
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD+ TLVSVI A A + +H YS + L +VYV TAL++ YAKCG AR+
Sbjct: 361 PDSFTLVSVIPALADISDPLQARWIHGYSIRLHL-DQDVYVLTALIDMYAKCGRVNIARI 419
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F++ RE++ +TW+AMI GYG G G ++ LF +M + + PNE F ++LSACSH G+
Sbjct: 420 LFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGL 479
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG + F SM D+ P M+HY MVDLL RAG+L+EA F++ MP++P +S++GA L
Sbjct: 480 VDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAML 539
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C L+ +L E +K+ EL P + Y+VL++N+YA+ W V +VR M++ GL K
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQK 599
Query: 668 SPGCSLVDL 676
+PG S++ L
Sbjct: 600 TPGWSIIQL 608
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 258/531 (48%), Gaps = 33/531 (6%)
Query: 40 TFASFHSLPSIPCL----NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYG 91
F + S + P L +LL LC + G L +A HA L G+ ++ T L +MY
Sbjct: 46 AFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYA 105
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH-DNFVFS 150
AR VFD MP D ++ ++ Y N L + +E M++ E D+
Sbjct: 106 KCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLV 165
Query: 151 KVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDK 209
VL AC R + + H ++ G + V T ++D Y KC DI ++R VFD K
Sbjct: 166 SVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTK 225
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
N VSW +MI GY QN ++E L LFNRM E V+ +++ + + AC +L L +G +H
Sbjct: 226 NSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVH 285
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
+++IG++ N ++ AL+ MY KC + A VFDEL VSW AMI+G Q+G +
Sbjct: 286 ELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSE 345
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALV 388
A++LFT + + P+ T+ SV+ A A + + R +H IRL L +D V+ AL+
Sbjct: 346 DAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALI 405
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAV 431
DMYAKC + AR +F + E+ VI WN++I G + + P+
Sbjct: 406 DMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNET 465
Query: 432 TLVSVISACASLGAVQVGSS-LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
T +SV+SAC+ G V G + GL + GT +++ + G A
Sbjct: 466 TFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGT-MVDLLGRAGKLDEAWAFIQ 524
Query: 491 AMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
M + + AM+G + + LA S E+ P E ++ +L+
Sbjct: 525 KMPMDPGLSVYGAMLGACKLHKN--VELAEESAQKIFELGPQEGVYHVLLA 573
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 173/367 (47%), Gaps = 48/367 (13%)
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
AL F A P T S+L A G+L GR VH+ G++ + AL +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------------DDNVSPDAV 431
MYAKC ADAR +F+ +D +AWN++++G ++ PD++
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
TLVSV+ ACA+ A+ HA++ + G L V V TA+L+ Y KCGD ++AR+VFD
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSG-LEELVNVATAILDAYCKCGDIRAARVVFDW 221
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
M KN+V+W+AMI GY GD +LALF+ M+ E V +V L AC G + EG
Sbjct: 222 MPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS----LFGAFL 607
+ + R ++ ++ + ++ R++ A + + VS + G
Sbjct: 282 MRVHELLVR-IGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQ 340
Query: 608 HGCG-----LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA----SD---GRWIRVNQ 655
+GC L++R L V PD + LVS + A SD RWI
Sbjct: 341 NGCSEDAVRLFTRMQLENV--------KPDS---FTLVSVIPALADISDPLQARWIHGYS 389
Query: 656 VRELMKQ 662
+R + Q
Sbjct: 390 IRLHLDQ 396
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/658 (34%), Positives = 359/658 (54%), Gaps = 34/658 (5%)
Query: 45 HSLPSI--PCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARS 101
H+ P + C + L + K + H ++ G +D L+ YG+ G +K +
Sbjct: 8 HTFPFVLKACADSLSVQKG----REIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKR 63
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV-FSKVLKACCELR 160
VFD M D S+ +I + ++ Y + + + M R N V VL C L
Sbjct: 64 VFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLE 123
Query: 161 DIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
D G ++HC +VK G DS V G LVD+Y KC + SR+VFDE ++N VSW ++I
Sbjct: 124 DGVTGRQIHCYVVKTG-LDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAII 182
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
+ Q+ L +F M +G V+ N +T S++ +L+ GK +HG+ L+ G+E
Sbjct: 183 TSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLE 242
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ + AL+DMY K G A +VF+++ ++VSW AM+ + Q+ A+ L
Sbjct: 243 SDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQM 302
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVI 397
+ PN VT +VL A A++G L G+ +H+ IR G D V NAL DMYAKC +
Sbjct: 303 QADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCL 362
Query: 398 ADARYIFETTSEKDVIAWNSIISGLDDNVS-----------------PDAVTLVSVISAC 440
AR +F+ S +D +++N +I G + D V+ + VISAC
Sbjct: 363 NLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISAC 421
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
A+L A++ G +H + ++ L +++++ ALL+FY KCG A VF + ++T +W
Sbjct: 422 ANLAALKQGKEVHGLAVRKH-LHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASW 480
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM-C 559
++MI GYGM G+ ++ LF M + V+ + V + +LSACSH G+V EG K F M
Sbjct: 481 NSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQV 540
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
++ K P+ HY CMVDLL RAG +EEA++ +E++PIEPD +++GA L C ++ +L
Sbjct: 541 QNIK--PTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELA 598
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ + +L P + YY ++SN+YA G+W NQVR+LMK RG K+PGCS V +D
Sbjct: 599 HWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQID 656
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 149/520 (28%), Positives = 262/520 (50%), Gaps = 28/520 (5%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+ F VLKAC + + +G ++H + K+G D FV L+ Y C + ++VF
Sbjct: 6 DDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVF 65
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFVEGNQITLGSLVTACAKLRA 261
DE L+++VVSW S+I + + E + LF M R GF N +++ S++ CA L
Sbjct: 66 DEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGF-RPNMVSIVSVLPVCAGLED 124
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
G+ +H Y++K G++ + AL+D+Y KCG ++D+R VFDE+ + VSW A+I
Sbjct: 125 GVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITS 184
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
AL++F PN VT +S+L +L + G+ +H +R GLE D
Sbjct: 185 LAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESD 244
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V NAL+DMYAK A +F EK++++WN++++ N
Sbjct: 245 IFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQA 304
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
P++VT +V+ ACA +G ++ G +HA + + G S +++V AL + YAKCG
Sbjct: 305 DGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTG-SSVDLFVSNALTDMYAKCGCLN 363
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR VF + ++ V+++ +I GY + SL LF +M + ++ + V + ++SAC+
Sbjct: 364 LARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACA 422
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
+ + +G K + + + ++D + GR++ A + +P D + +
Sbjct: 423 NLAALKQG-KEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP-SRDTASW 480
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ + G G+ + + + M E + D Y ++S
Sbjct: 481 NSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLS 520
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/640 (34%), Positives = 346/640 (54%), Gaps = 21/640 (3%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
KS K H + + GL D + L+ +Y GH+ A+ +FD++P D + VM+
Sbjct: 72 KSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVML 131
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP 178
Y N + ++ + MR + ++ F+ VL C +D G ++H V G
Sbjct: 132 NGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLE 191
Query: 179 -DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
DS V L+ MY+KC+ + ++R++FD ++VSW +I+GYVQN E LF M
Sbjct: 192 LDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGM 251
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
++ + IT S + +L +L K +HGYI++ + ++ L +AL+D+Y KC ++
Sbjct: 252 ISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDV 311
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
A+ + S D V T MI GY +G +AL+ F P VT +S+ A
Sbjct: 312 EMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAF 371
Query: 358 AQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A L LN+G+ +H I+ L E V +A++DMYAKC + A +F +EKD I WN
Sbjct: 372 AGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431
Query: 417 SIISGLDDNVSP-----------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
S+I+ N P D V++ +SACA+L A+ G +H K
Sbjct: 432 SMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK- 490
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G L S++Y ++L++ YAKCG+ +R VFD M+EKN V+W+++I YG GD LAL
Sbjct: 491 GPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLAL 550
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F +ML +QP+ V F I+SAC H G V EG + ++ M ++ M+HY C+ D+
Sbjct: 551 FHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFG 610
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
RAGRL EA E + +MP PD ++G L C ++ +L EV K + +L P + YYVL
Sbjct: 611 RAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVL 670
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
++N+ A G+W +V +VR +MK+RG+ K PG S ++++ A
Sbjct: 671 LANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNA 710
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 172/616 (27%), Positives = 281/616 (45%), Gaps = 57/616 (9%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MY G +K A+++F ++ ++ MIR + + + + FY M D +
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F V+KACC L+ + G VH E V + G D FV + L+ +YA+ + ++ +FD
Sbjct: 61 FPYVVKACCGLKSVKMGKIVH-ETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNI 119
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
K+ V W M+ GYV+N + + +F MR ++ N +T +++ CA L G
Sbjct: 120 PQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGT 179
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
LHG + G+E++S + LL MY KC ++ AR +FD L DLVSW +I GY Q+G
Sbjct: 180 QLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNG 239
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
+A LF A P+ +T AS L +L +L + +H IR + D + +
Sbjct: 240 LMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKS 299
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSP 428
AL+D+Y KC + A+ +S D + ++ISG + + + P
Sbjct: 300 ALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKP 359
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
+VT S+ A A L A+ +G LH S + L +VG+A+L+ YAKCG A V
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHG-SIIKTKLDEKCHVGSAILDMYAKCGRLDLACRV 418
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+ + EK+ + W++MI G G ++ LF M E + + V + LSAC++ +
Sbjct: 419 FNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPAL 478
Query: 549 GEGWKC---------------------FYSMCRDFKFVPSM------KHYV---CMVDLL 578
G + Y+ C + F + K+ V ++
Sbjct: 479 HYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAY 538
Query: 579 ARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH--PDK 633
G L+E L M I+PD F + CG + D G M E + P +
Sbjct: 539 GNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPAR 598
Query: 634 ACYYVLVSNLYASDGR 649
+Y V++++ GR
Sbjct: 599 MEHYACVADMFGRAGR 614
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/650 (33%), Positives = 360/650 (55%), Gaps = 27/650 (4%)
Query: 53 LNLLGLCKSTGSLKA---FHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPN 108
L+LL C + LK H ++ GL N+ K L+++Y S + A+ VF ++ N
Sbjct: 7 LSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIEN 66
Query: 109 P-DFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P D + ++ N ++ + +E F++ + + D F + VLKAC L + G
Sbjct: 67 PLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGK 126
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
VH ++K G D V++ V MYAKC + ++FDE +++V SW ++I+ Y Q+
Sbjct: 127 MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG 186
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
++ L LF M+ + + +TL +++++CA+L L +GK +H +++ G ++ + +
Sbjct: 187 QPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 246
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY KCG + A+ VF+++ ++VSW +MI GY+ G ++LF P
Sbjct: 247 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 306
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
T++S+L A ++ NL +G+ +H IR +E D V ++L+D+Y KC I A +F
Sbjct: 307 TLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVF 366
Query: 405 ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQ 447
+ + +V++WN +ISG V PDA+T SV+ AC+ L ++
Sbjct: 367 QNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLE 426
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +H + + L + V +G ALL+ YAKCG A +F+ + E++ V+W++MI Y
Sbjct: 427 KGKEIHNFIIESKLEINEVVMG-ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAY 485
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G G +L LF M + +P++V F ILSACSH G+V EG F M ++ F P+
Sbjct: 486 GSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPA 545
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMP-IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++HY C++DLL R GRL EA E ++ P I DV L C L+ + DLGE + + +
Sbjct: 546 VEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLL 605
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+E PD Y+++SN+YAS +W V +VR +K+ GL K+PGCS +++
Sbjct: 606 IEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEV 655
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 229/437 (52%), Gaps = 31/437 (7%)
Query: 44 FHSLPSIPCL--------NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYG 91
FH L P L ++L C G + K H +I G D + V MY
Sbjct: 93 FHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYA 152
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
+ A +FD MP D S+ +I Y+ + + +E ++ M+ + D+ +
Sbjct: 153 KCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTT 212
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
V+ +C L D++ G ++H E+V+ G D FV + LVDMY KC + +++VF++ KN
Sbjct: 213 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN 272
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
VVSW SMIAGY ++ + LF RM E + TL S++ AC++ L GK++HG
Sbjct: 273 VVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHG 332
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
YI++ +E + + ++L+D+Y KCGNI A +VF + ++VSW MI GY + G +
Sbjct: 333 YIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLE 392
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
AL +FTD + A P+ +T SVL A +QL L G+ +H+ I LE + V+ AL+D
Sbjct: 393 ALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLD 452
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVT 432
MYAKC + +A +IF E+D ++W S+I+ + PD VT
Sbjct: 453 MYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVT 512
Query: 433 LVSVISACASLGAVQVG 449
++++SAC+ G V G
Sbjct: 513 FLAILSACSHAGLVDEG 529
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/653 (34%), Positives = 348/653 (53%), Gaps = 33/653 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+++L S G+L K H+ + GL D + LV MY G + AR VFD M
Sbjct: 324 VSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTE 383
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR-----LKEHDNFVFSKVLKACCELRDID 163
D +S+ VMI + ++ + M++ L + + + + + + L
Sbjct: 384 RDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSAL---- 439
Query: 164 EGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
E +KV + + G D + L+ MYAKC I +R VFD D++V+SW +M+ G
Sbjct: 440 EWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGL 499
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
QN C E +F +M++ + + T SL+ AL +H + ++ G+ +
Sbjct: 500 AQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDF 559
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ +A + MY++CG+I DAR +FD+L + +W AMI G Q +AL LF +
Sbjct: 560 RVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQRE 619
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADAR 401
F P+ T ++LSA+ L + VHS GL D V NALV Y+KC + A+
Sbjct: 620 GFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAK 679
Query: 402 YIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLG 444
+F+ E++V W +I GL + + PDA T VS++SACAS G
Sbjct: 680 QVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTG 739
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
A++ +H ++ GL+S ++ VG AL++ YAKCG AR VFD M E++ +W+ MI
Sbjct: 740 ALEWVKEVHNHAVSAGLVS-DLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMI 798
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GG G G +L F M +E +PN + +L+ACSH G+V EG + F SM +D+
Sbjct: 799 GGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGI 858
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
P+M+HY CMVDLL RAG LEEA F+ NMPIEPD + +GA L C Y ++ E K
Sbjct: 859 EPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMAEFAAK 918
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ L+L P A YVL+SN+YA+ G+W + VR +M+++G+ K PG S +++D
Sbjct: 919 ERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVD 971
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 201/640 (31%), Positives = 321/640 (50%), Gaps = 42/640 (6%)
Query: 46 SLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARS 101
++ S +N+L C + K H +I G+ N KL+ +Y G ++ AR
Sbjct: 115 AIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQ 174
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VFD + + Y + MI Y +D + Y MR+ + + + +LKACC +
Sbjct: 175 VFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVN 234
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+ G K+H I++ G D V T LV+MY KC I ++ +FD+ +++NV+SWT MI G
Sbjct: 235 LKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGG 294
Query: 221 YVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
QE LF +M REGF+ N T S++ A A AL K +H + + G+ +
Sbjct: 295 LAHYGRGQEAFHLFLQMQREGFIP-NSYTYVSILNANASAGALEWVKEVHSHAVNAGLAL 353
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ + AL+ MY K G+I DAR VFD + D+ SWT MI G Q G +A LF +
Sbjct: 354 DLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQ 413
Query: 340 WADFFPNHVTIASVLSAS--AQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHV 396
PN T S+L+AS A L ++VH G + D + NAL+ MYAKC
Sbjct: 414 RNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGS 473
Query: 397 IADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISA 439
I DAR +F+ ++DVI+WN+++ GL N + PD+ T +S+++
Sbjct: 474 IDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNT 533
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
S A++ + +H ++ + GL+ S+ VG+A ++ Y +CG AR++FD + ++ T
Sbjct: 534 HGSTDALEWVNEVHKHAVETGLI-SDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTT 592
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+AMIGG Q G +L+LF M E P+ F ILSA + E K +S
Sbjct: 593 WNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEAL-EWVKEVHSHA 651
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF-----GAFLHGCGLYS 614
D V ++ +V ++ G ++ A + ++M +E +V+ + G HGCG +
Sbjct: 652 TDAGLV-DLRVGNALVHTYSKCGNVKYAKQVFDDM-VERNVTTWTMMIGGLAQHGCG-HD 708
Query: 615 RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG--RWIR 652
F M+++ + PD A YV + + AS G W++
Sbjct: 709 AFSHFLQMLREGIV--PD-ATTYVSILSACASTGALEWVK 745
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 146/439 (33%), Positives = 242/439 (55%), Gaps = 22/439 (5%)
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGL 186
KD V K ++ D+F + +L+ C + DI +VH I+K G + +V L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ +Y +C + +RQVFD+ L KN+ WT+MI GY + A++ + ++++MR+ + N+
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
IT S++ AC L GK +H +I++ G + + + TAL++MYVKCG+I DA+ +FD+
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ +++SWT MI G G +A LF + F PN T S+L+A+A G L
Sbjct: 280 MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--- 422
+ VHS + GL D V NALV MYAK I DAR +F+ +E+D+ +W +I GL
Sbjct: 340 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH 399
Query: 423 --------------DDNVSPDAVTLVSVI--SACASLGAVQVGSSLHAYSTKQGLLSSNV 466
+ P+ T +S++ SA AS A++ +H ++ + G + S++
Sbjct: 400 GRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFI-SDL 458
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+G AL++ YAKCG AR+VFD M +++ ++W+AM+GG G G + +F M E
Sbjct: 459 RIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQE 518
Query: 527 EVQPNEVIFTTILSACSHT 545
+ P+ + ++L+ T
Sbjct: 519 GLVPDSTTYLSLLNTHGST 537
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/630 (33%), Positives = 357/630 (56%), Gaps = 16/630 (2%)
Query: 55 LLGLCKSTGSLK---AFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
LL C+ L+ H + +G+ +N T L+ Y F ++ +FD M
Sbjct: 167 LLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVR 225
Query: 110 DFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ S+ MI Y+ + D +K + F + + +K D ++AC EL + G ++
Sbjct: 226 NIVSWNAMISGYYDVGDYFKALELFVQMLVDEVK-FDCVTMLVAVQACAELGSLKLGKQI 284
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +K D ++L L++MY+ + SS Q+F+ +++ W SMI+ Y C
Sbjct: 285 HQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCH 344
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA-LHQGKWLHGYILKIGIEINSHLVTA 286
+E + LF RM+ V+ ++ T+ +++ C +L + L +GK LH +++K G+ I++ L A
Sbjct: 345 EEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNA 404
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
LL MY + + + +FD + +D++SW MI+ ++ +A +LF + ++ PN
Sbjct: 405 LLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPN 464
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
TI S+L+A + L+ GR +H ++ +E + + AL DMY C A AR +FE
Sbjct: 465 SYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFE 524
Query: 406 TTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL-LSS 464
++D+I+WN++I P++VT+++V+S+ L + G SLHAY T++G L
Sbjct: 525 GCPDRDLISWNAMIX----KAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGL 580
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
++ + A + YA+CG QSA +F + ++N ++W+AMI GYGM G G ++ FS ML
Sbjct: 581 DLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDAMLAFSQML 640
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ +PN V F ++LSACSH+G + G + F+SM +DF P + HY C+VDLLAR G +
Sbjct: 641 EDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCI 700
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA EF+++MPIEPD S++ A L C YS + + +K+ +L P A YVL+SN+Y
Sbjct: 701 DEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGNYVLLSNVY 760
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
A+ G W+ V ++R +K++GL K PG S +
Sbjct: 761 ATAGLWLEVRRIRTWLKEKGLRKPPGISWI 790
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 211/419 (50%), Gaps = 23/419 (5%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVF 203
+N VLKAC ++ G +H I D V T +VD Y KC + +R VF
Sbjct: 59 NNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVF 118
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D D++VV W +M+ GYV C +E ++L M + N T+ +L+ AC L
Sbjct: 119 DAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELR 178
Query: 264 QGKWLHGYILKIGI-EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +HGY L+ G+ + N H+ TAL+ Y++ ++R +FD + ++VSW AMI GY
Sbjct: 179 LGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGY 237
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDY 381
G KAL+LF + + VT+ + A A+LG+L +G+ +H L I+ +ED
Sbjct: 238 YDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDL 297
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DD 424
++NAL++MY+ + + +FE+ +D WNS+IS +
Sbjct: 298 YILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSE 357
Query: 425 NVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V D T+V ++S C L + + G SLHA+ K G + + +G ALL+ Y + +
Sbjct: 358 GVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSG-MRIDASLGNALLSMYTELNCVE 416
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
S + +FD M+ + ++W+ MI + LF M E++PN +IL+AC
Sbjct: 417 SVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAAC 475
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 27/358 (7%)
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
K+ W S+I Q L + +M V N TL ++ ACA A+ +GK +
Sbjct: 23 KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 82
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H I + + + TA++D Y KCG + DAR VFD + D+V W AM+ GY G
Sbjct: 83 HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 142
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT--VINA 386
++A+ L + + PN T+ ++L A L +GR VH +R G+ D V A
Sbjct: 143 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 202
Query: 387 LVDMYAKCHVIADAR---YIFETTSEKDVIAWNSIISG-----------------LDDNV 426
L+ Y + D R +F+ +++++WN++ISG L D V
Sbjct: 203 LIGFYLR----FDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEV 258
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VT++ + ACA LG++++G +H + K + ++Y+ ALLN Y+ G +S+
Sbjct: 259 KFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFV-EDLYILNALLNMYSNNGSLESSH 317
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
+F+++ ++ W++MI Y G ++ LF M +E V+ +E +LS C
Sbjct: 318 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEE 375
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/648 (33%), Positives = 350/648 (54%), Gaps = 29/648 (4%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ H + +V G +D NT LV MY G + +R +F + + S+ + Y
Sbjct: 102 RKVHGMAVVTGFESDGFVANT-LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQ 160
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
++L + V +K M + + F S +L AC L++ D G K+H ++K+G D F
Sbjct: 161 SELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFS 220
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
LVDMY+K +I + VF + +VVSW ++IAG V +DC L+L + M+
Sbjct: 221 ANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGT 280
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N TL S + ACA + G+ LH ++K+ + L+DMY KC + DAR
Sbjct: 281 RPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARR 340
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+D + D+++W A+I GY+Q G A+ LF+ D N T+++VL + A L
Sbjct: 341 AYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQA 400
Query: 363 LNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+ + + +H++ I+ G+ D+ VIN+L+D Y KC+ I +A IFE + +D++A+ S+I+
Sbjct: 401 IKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITA 460
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
D ++ PD S+++ACA+L A + G LH ++ K G +
Sbjct: 461 YSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMC- 519
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+++ +L+N YAKCG + A F + + V+WSAMIGGY G G +L LF+ ML
Sbjct: 520 DIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQML 579
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ V PN + ++L AC+H G+V EG + F M F P+ +HY CM+DLL R+G+L
Sbjct: 580 RDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKL 639
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
EA+E + ++P E D ++GA L ++ +LG+ K + +L P+K+ +VL++N+Y
Sbjct: 640 NEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIY 699
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSR 686
AS G W V +VR+ MK + K PG S +++ I D S SR
Sbjct: 700 ASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSR 747
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 292/568 (51%), Gaps = 26/568 (4%)
Query: 68 FHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA LI G + D LV++Y YAR + D D S+ ++ Y N
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
++ + + M + + F F VLKAC RD++ G KVH V G D FV
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
LV MYAKC + SR++F +++NVVSW ++ + YVQ++ E + LF M + N
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ ++ ++ ACA L+ G+ +HG +LK+G++++ AL+DMY K G I A +VF
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
++ D+VSW A+I G D AL L + K + PN T++S L A A +G +
Sbjct: 243 DIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKEL 302
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
GR +HS I++ D LVDMY+KC ++ DAR +++ +KD+IAWN++ISG
Sbjct: 303 GRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQ 362
Query: 422 --------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+++ + TL +V+ + ASL A++V +H S K G+ S+ Y
Sbjct: 363 CGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIY-SDFY 421
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V +LL+ Y KC A +F+ ++ V +++MI Y GDG +L L+ M + +
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDAD 481
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
++P+ I +++L+AC++ +G K + F F+ + +V++ A+ G +E+A
Sbjct: 482 IKPDPFICSSLLNACANLSAYEQG-KQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDA 540
Query: 588 LEFMENMPIEPDVS---LFGAFL-HGCG 611
+P VS + G + HG G
Sbjct: 541 DRAFSEIPNRGIVSWSAMIGGYAQHGHG 568
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 276/534 (51%), Gaps = 61/534 (11%)
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
M++H ++K G D + LV +Y+KCR G +R++ DE+ + +VVSW+S+++GYVQN
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+E L++FN M V+ N+ T S++ AC+ R L+ G+ +HG + G E + +
Sbjct: 61 GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
L+ MY KCG + D+R +F + ++VSW A+ Y QS +A+ LF + +
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIM 180
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
PN +I+ +L+A A L ++GR +H L +++GL+ D NALVDMY+K I A +
Sbjct: 181 PNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAV 240
Query: 404 FETTSEKDVIAWNSIISG-------------LDD----NVSPDAVTLVSVISACASLGAV 446
F+ + DV++WN+II+G LD+ P+ TL S + ACA++G
Sbjct: 241 FQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFK 300
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++G LH+ K S+++ L++ Y+KC AR +D+M +K+ + W+A+I G
Sbjct: 301 ELGRQLHSSLIKMD-AHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISG 359
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEG-WKC 554
Y GD +++LFS M +E++ N+ +T+L + + HT + G +
Sbjct: 360 YSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSD 419
Query: 555 FYSMCRDFKFVPSMKH------------------YVCMVDLLARAGRLEEALEF---MEN 593
FY + H Y M+ ++ G EEAL+ M++
Sbjct: 420 FYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQD 479
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
I+PD + + L+ C S ++ G K L +H K + + +++AS+
Sbjct: 480 ADIKPDPFICSSLLNACANLSAYEQG-----KQLHVHAIK---FGFMCDIFASN 525
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 230/685 (33%), Positives = 346/685 (50%), Gaps = 68/685 (9%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD--FYSFQV 116
CK+ +K H L+ G+ + L+S Y S G + +A S+ P D Y +
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG 176
+IR Y N + + M DN+ F V KAC E+ + G H + G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 177 G-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
+ FV LV MY++CR + +R+VFDE +VVSW S+I Y + + L +F+
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 236 RMREGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
RM F + ITL +++ CA L GK LH + + + N + L+DMY KC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK----------WADFF 344
G + +A +VF + D+VSW AM+ GY+Q G + A++LF + W+
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 345 -------------------------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
PN VT+ SVLS A +G L G+ +H I+ ++
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 380 --------DYTVINALVDMYAKCHVIADARYIFETTS--EKDVIAWNSIISGL------- 422
+ VIN L+DMYAKC + AR +F++ S E+DV+ W +I G
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 423 ------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
D P+A T+ + ACASL A+++G +HAY+ + + ++V
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
L++ YAKCG AR+VFD M KN VTW++++ GYGM G G +L +F +M +
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
+ V +L ACSH+GM+ +G + F M F P +HY C+VDLL RAGRL AL
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
+E MP+EP ++ AFL C ++ + +LGE +K+ EL + Y L+SNLYA+ GRW
Sbjct: 638 IEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRW 697
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVD 675
V ++R LM+ +G+ K PGCS V+
Sbjct: 698 KDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 155/311 (49%), Gaps = 23/311 (7%)
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID--LVSW 315
K + + Q K +H +L GI + +L + L+ Y+ G + A S+ D + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++I Y +G +K L LF + P++ T V A ++ ++ G H+L +
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 376 LG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
G + + V NALV MY++C ++DAR +F+ S DV++WNSII
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 423 ------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ PD +TLV+V+ CASLG +G LH ++ ++ N++VG L++ Y
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMY 274
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG A VF M K+ V+W+AM+ GY G ++ LF M E+++ + V ++
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 537 TILSACSHTGM 547
+S + G+
Sbjct: 335 AAISGYAQRGL 345
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 18/273 (6%)
Query: 53 LNLLGLCKSTGSL---KAFHALLI---VDGLTNDKCN-----TKLVSMYGSFGHVKYARS 101
+++L C S G+L K H I +D N + +L+ MY V AR+
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 102 VFDSMP--NPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDN-FVFSKVLKACC 157
+FDS+ D ++ VMI Y + D K + + + + N F S L AC
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 158 ELRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWT 215
L + G ++H ++ FV L+DMYAKC I +R VFD + KN V+WT
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILK 274
S++ GY + +E L +F+ MR + + +TL ++ AC+ + QG ++ +
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
G+ L+D+ + G + A + +E+
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 353/647 (54%), Gaps = 28/647 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L+L S L HA +++ G ND TKL G + YAR +F S+ PD
Sbjct: 24 LDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF-VFSKVLKACCELRDIDEGMKVHC 170
+ F V++R + +N+ + + +RK N ++ + A RD G +H
Sbjct: 84 FLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHG 143
Query: 171 EIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ + V G DS +L G +V MY K + +R+VFD +K+ + W +MI+GY +N+
Sbjct: 144 QAI-VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 229 EGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E + +F + + E + TL ++ A A+L+ L G +H K G + +++T
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ +Y KCG I+ A ++F E D+V++ AMI GYT +G + +L LF + +
Sbjct: 263 ISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKS 322
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFET 406
T+ S++ S G+L + +H ++ +T V AL +Y+K + I AR +F+
Sbjct: 323 STLVSLVPVS---GHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDE 379
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+ EK + +WN++ISG N SP+ VT+ ++SACA LGA+ +G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLG 439
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H + S++YV TAL+ YAKCG AR +FD M +KN VTW+ MI GYG+
Sbjct: 440 KWVHDL-VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGL 498
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L +FS+MLN + P V F +L ACSH G+V EG + F SM + F PS+K
Sbjct: 499 HGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY C+VD+L RAG L+ AL+F+E MPI+P S++ L C ++ +L + +K+ EL
Sbjct: 559 HYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFEL 618
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
PD Y+VL+SN++++D + + VR+ K+R L+K+PG +L+++
Sbjct: 619 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/549 (36%), Positives = 312/549 (56%), Gaps = 20/549 (3%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
VF +L+ C LR +++G +VH I+K G P+ ++ L+ MYAKC + +R+VFD
Sbjct: 98 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGI 157
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
D+N+VSWT+MI +V + E + M+ + +++T SL+ A L G+
Sbjct: 158 RDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQ 217
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+H I K G+E+ + T+L+ MY KCG+I A+ +FD+L ++V+WT +I GY Q G
Sbjct: 218 KVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQG 277
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVIN 385
D AL+L + A+ PN +T S+L L G+ VH I+ G + V+N
Sbjct: 278 QVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVN 337
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSP 428
AL+ MY KC + +AR +F +DV+ W ++++G + P
Sbjct: 338 ALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKP 397
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D +T S +++C+S +Q G S+H G S +VY+ +AL++ YAKCG AR+V
Sbjct: 398 DKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGY-SLDVYLQSALVSMYAKCGSMDDARLV 456
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+ M E+N V W+AMI G G +L F M + ++P++V FT++LSAC+H G+V
Sbjct: 457 FNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLV 516
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
EG K F SM D+ P ++HY C VDLL RAG LEEA + MP +P S++GA L
Sbjct: 517 EEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLS 576
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C ++S + GE + +L+L PD YV +SN+YA+ GR+ +VR++M++R + K
Sbjct: 577 ACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKE 636
Query: 669 PGCSLVDLD 677
PG S +++D
Sbjct: 637 PGQSWIEVD 645
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 215/418 (51%), Gaps = 23/418 (5%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
LL C SL + HA ++ G+ N L+SMY G + AR VFD + + +
Sbjct: 102 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRN 161
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ MI + + + + Y+ M+ + D F +L A + G KVH
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221
Query: 171 EIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
EI K G + V T LV MYAKC DI ++ +FD+ +KNVV+WT +IAGY Q
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L L +M++ V N+IT S++ C AL GK +H YI++ G +V AL+
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALIT 341
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG +++AR +F +L D+V+WTAM+ GY Q G+ D+A+ LF + P+ +T
Sbjct: 342 MYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMT 401
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
S L++ + L G+ +H + G D + +ALV MYAKC + DAR +F S
Sbjct: 402 FTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMS 461
Query: 409 EKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
E++V+AW ++I+G + PD VT SV+SAC +G V+ G
Sbjct: 462 ERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 519
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 151/330 (45%), Gaps = 36/330 (10%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++MY G +K AR +F +P+ D ++ M+ Y + + ++ ++ M+++ + D
Sbjct: 339 LITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPD 398
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F+ L +C + EG +H ++V G D ++ + LV MYAKC + +R VF+
Sbjct: 399 KMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFN 458
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ ++NVV+WT+MI G Q+ +E L F +M++ ++ +++T S+++AC + + +
Sbjct: 459 QMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEE 518
Query: 265 G-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G K L GI+ + +D+ + G++ +A +V +
Sbjct: 519 GRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTM---------------- 562
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
F P ++LSA ++ G ++L +D
Sbjct: 563 ------------------PFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGA 604
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVI 413
AL ++YA DA + + ++DV+
Sbjct: 605 YVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 234/641 (36%), Positives = 350/641 (54%), Gaps = 28/641 (4%)
Query: 57 GLCKSTGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
G+ G K H + G D CN+ L+ MY S G + A +F M D S+
Sbjct: 309 GMLSEVGFAKEMHGFAVKRGFAIDVAFCNS-LIQMYTSLGRMGDAGKIFSRMETKDAMSW 367
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MI Y N +E Y M D+ + L AC L +D G+K+H E+ +
Sbjct: 368 TAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLH-ELAQ 426
Query: 175 VGGPDSFVL--TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
G +V+ L++MYAK + I + +VF +K+VVSW+SMIAG+ N + + L
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALY 486
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
F M G V+ N +T + ++ACA AL GK +H Y+L+ GI ++ ALLD+YV
Sbjct: 487 YFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYV 545
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
KCG A + F D+VSW M+ G+ G D AL LF + + S
Sbjct: 546 KCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACS 603
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKD 411
L+A A LG L++G +H L G Y V+ NAL++MYAK I A +F+ +EKD
Sbjct: 604 ALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKD 663
Query: 412 VIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLGAVQVGSSLHAY 455
V++W+S+I+G N V P++VT ++ +SACA+ GA++ G +HAY
Sbjct: 664 VVSWSSMIAGFCFNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAY 723
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
+ G+ S YV ALL+ Y KCG A F EK+ V+W+ M+ G+ G G
Sbjct: 724 VLRCGI-GSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDI 782
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
+L+LF+ M+ P+EV F ++ ACS GMV +GW+ F+ F VP++KHY CMV
Sbjct: 783 ALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYACMV 841
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DLL+R G+L EA + MPI+PD +++GA L+GC ++ +LGE+ K +LEL P+
Sbjct: 842 DLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVA 901
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+VL+ +LY G+W +V +VR+ M+++GL + GCS V++
Sbjct: 902 YHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEV 942
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 165/462 (35%), Positives = 255/462 (55%), Gaps = 19/462 (4%)
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+ ++SM FG + +A VF MP D +S+ VM+ Y ++ ++ Y M
Sbjct: 132 RLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA 191
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
D + F VL+ C + D G +VH +++ G G + VL LV MYAKC DI ++
Sbjct: 192 GMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAA 251
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R+VFD + +SW +MIAG+ +N + GL LF M E V+ N +T+ S+ A L
Sbjct: 252 RKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGML 311
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ K +HG+ +K G I+ +L+ MY G + DA +F + + D +SWTAMI
Sbjct: 312 SEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMI 371
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY ++G+PDKAL+++ + + P+ VTIAS L+A A LG L++G +H L G
Sbjct: 372 SGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFI 431
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y V+ NAL++MYAK I A +F+ +EKDV++W+S+I+G N
Sbjct: 432 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM 491
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V P++VT ++ +SACA+ GA++ G +HAY + G + S YV ALL+ Y KCG
Sbjct: 492 LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCG-IGSEGYVPNALLDLYVKCGQT 550
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
A F EK+ V+W+ M+ G+ G G +L+LF+ M+
Sbjct: 551 SYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMM 592
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 187/382 (48%), Gaps = 35/382 (9%)
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
ACA+ A H + L++G A+L M V+ G I A VF ++ D+ S
Sbjct: 118 ACARADAEHPS-----FGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPERDVFS 164
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W M+ GY + G+ ++AL L+ WA P+ T VL + + MGR VH+ +
Sbjct: 165 WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVL 224
Query: 375 RLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------ 421
R G D V+NALV MYAKC I AR +F+ + D I+WN++I+G
Sbjct: 225 RFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLE 284
Query: 422 -----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
L++ V P+ +T+ SV A L V +H ++ K+G + +V +L+ Y
Sbjct: 285 LFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRG-FAIDVAFCNSLIQMY 343
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
G A +F M K+ ++W+AMI GY G +L +++ M V P++V
Sbjct: 344 TSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIA 403
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+ L+AC+ G + G K + + ++ F+ + ++++ A++ +++A+E + M
Sbjct: 404 SALAACACLGRLDVGIK-LHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMA- 461
Query: 597 EPDVSLFGAFLHG-CGLYSRFD 617
E DV + + + G C + FD
Sbjct: 462 EKDVVSWSSMIAGFCFNHRSFD 483
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 353/634 (55%), Gaps = 24/634 (3%)
Query: 66 KAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFL 123
K H ++ GL N+ K L+++Y S + A+ VF ++ NP D + ++
Sbjct: 215 KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTK 274
Query: 124 NDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N ++ + +E F++ + + D F + VLKAC L + G VH ++K G D
Sbjct: 275 NFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVV 334
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V++ V MYAKC + ++FDE +++V SW ++I+ Y Q+ ++ L LF M+
Sbjct: 335 VMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSG 394
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + +TL +++++CA+L L +GK +H +++ G ++ + +AL+DMY KCG + A+
Sbjct: 395 FKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK 454
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF+++ ++VSW +MI GY+ G ++LF P T++S+L A ++
Sbjct: 455 EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSV 514
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
NL +G+ +H IR +E D V ++L+D+Y KC I A +F+ + +V++WN +IS
Sbjct: 515 NLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMIS 574
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G V PDA+T SV+ AC+ L ++ G +H + + L
Sbjct: 575 GYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEI 634
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+ V +G ALL+ YAKCG A +F+ + E++ V+W++MI YG G +L LF M
Sbjct: 635 NEVVMG-ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKM 693
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+ +P++V F ILSACSH G+V EG F M ++ F P+++HY C++DLL R GR
Sbjct: 694 QQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGR 753
Query: 584 LEEALEFMENMP-IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
L EA E ++ P I DV L C L+ + DLGE + + ++E PD Y+++SN
Sbjct: 754 LREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSN 813
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+YAS +W V +VR +K+ GL K+PGCS +++
Sbjct: 814 MYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEV 847
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 229/437 (52%), Gaps = 31/437 (7%)
Query: 44 FHSLPSIPCL--------NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYG 91
FH L P L ++L C G + K H +I G D + V MY
Sbjct: 285 FHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYA 344
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
+ A +FD MP D S+ +I Y+ + + +E ++ M+ + D+ +
Sbjct: 345 KCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTT 404
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
V+ +C L D++ G ++H E+V+ G D FV + LVDMY KC + +++VF++ KN
Sbjct: 405 VISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKN 464
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
VVSW SMIAGY ++ + LF RM E + TL S++ AC++ L GK++HG
Sbjct: 465 VVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHG 524
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
YI++ +E + + ++L+D+Y KCGNI A +VF + ++VSW MI GY + G +
Sbjct: 525 YIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLE 584
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
AL +FTD + A P+ +T SVL A +QL L G+ +H+ I LE + V+ AL+D
Sbjct: 585 ALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLD 644
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVT 432
MYAKC + +A +IF E+D ++W S+I+ + PD VT
Sbjct: 645 MYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVT 704
Query: 433 LVSVISACASLGAVQVG 449
++++SAC+ G V G
Sbjct: 705 FLAILSACSHAGLVDEG 721
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/610 (34%), Positives = 345/610 (56%), Gaps = 21/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV MY G + AR VFD MP D S+ +I Y + Y++ +E Y +R D
Sbjct: 147 LVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPD 206
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+F S VL A L + +G +H +K G S V GL+ MY K +R+VFD
Sbjct: 207 SFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFD 266
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E + ++ V++ +MI GY++ + +E + +F + F + + +T+ S++ AC LR L
Sbjct: 267 EMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQF-KPDILTVTSVLCACGHLRDLSL 325
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
K+++ Y+L+ G + S + L+D+Y KCG++ AR VF+ + D VSW ++I GY Q
Sbjct: 326 AKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
SG +A+KLF + +H+T ++S S +L +L G+ +HS GI+ G+ D +V
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSV 445
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNV 426
NAL+DMYAKC + D+ IF + D + WN++IS GL + V
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKV 505
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T + + CASL A ++G +H + G S + +G AL+ Y+KCG +S+
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY-ESELQIGNALIEMYSKCGCLESSF 564
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ M ++ VTW+ MI YGM G+G +L F DM + P+ V+F ++ ACSH+G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSG 624
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V +G CF M +K P ++HY C+VDLL+R+ ++ +A EF++ MPIEPD S++ +
Sbjct: 625 LVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASV 684
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C + E + ++++EL+PD Y +L SN YA+ +W +V+ +R+ ++ + +
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIK 744
Query: 667 KSPGCSLVDL 676
K+PG S +++
Sbjct: 745 KNPGYSWIEI 754
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 176/602 (29%), Positives = 305/602 (50%), Gaps = 33/602 (5%)
Query: 65 LKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVMIRWYF 122
L+ HAL+I GL +D + KL+ Y F + SVF + P + Y + +IR +
Sbjct: 23 LRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFS 82
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N + +EFY +R+ D + F V+KAC L D + G V+ +I+++G D +
Sbjct: 83 KNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFESDLY 142
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V LVDMY++ + +RQVFDE +++VSW S+I+GY + +E L +++ +R +
Sbjct: 143 VGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSW 202
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T+ S++ A A L + QG+ LHG+ LK G+ S + LL MY+K DAR
Sbjct: 203 IVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDAR 262
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFDE+ D V++ MI GY + ++++K+F + F P+ +T+ SVL A L
Sbjct: 263 RVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPDILTVTSVLCACGHLR 321
Query: 362 NLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L++ + +++ +R G + + TV N L+D+YAKC + AR +F + KD ++WNSIIS
Sbjct: 322 DLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G + D +T + +IS L ++ G LH+ K G+
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIY- 440
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
++ V AL++ YAKCG+ + +F++M +TVTW+ +I GD L + + M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+V P+ F L C+ G + + R F + ++ ++++ ++ G
Sbjct: 501 RKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGC 559
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH-----PDKACYYV 638
LE + E M DV + ++ G+Y GE ++ +++ PD +
Sbjct: 560 LESSFRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALESFVDMEKSGIVPDSVVFIA 615
Query: 639 LV 640
L+
Sbjct: 616 LI 617
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 142/508 (27%), Positives = 258/508 (50%), Gaps = 24/508 (4%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDE-TLDK 209
+ +A +++E ++H ++ +G S +G L+D Y+ R SS VF + K
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAK 69
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
NV W S+I + +N + L + ++RE V ++ T S++ ACA L G ++
Sbjct: 70 NVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
IL++G E + ++ AL+DMY + G + AR VFDE+ DLVSW ++I GY+ GY +
Sbjct: 130 KQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALV 388
+AL+++ + + + P+ T++SVL A A L + G+ +H ++ G+ +V+ N L+
Sbjct: 190 EALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLL 249
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISG---LD-------------DNVSPDAVT 432
MY K DAR +F+ +D + +N++I G L+ D PD +T
Sbjct: 250 AMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILT 309
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ SV+ AC L + + ++ Y + G + + V L++ YAKCGD +AR VF++M
Sbjct: 310 VTSVLCACGHLRDLSLAKYIYNYMLRAGFVLEST-VKNILIDVYAKCGDMITARDVFNSM 368
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
K+TV+W+++I GY GD ++ LF M+ E Q + + + ++S + + G
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFG- 427
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
K +S + ++D+ A+ G + ++L+ +M D + + C
Sbjct: 428 KGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGT-LDTVTWNTVISACVR 486
Query: 613 YSRFDLGEVMIKKML--ELHPDKACYYV 638
+ F G + +M ++ PD A + V
Sbjct: 487 FGDFATGLQVTTQMRKNKVVPDMATFLV 514
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 231/709 (32%), Positives = 372/709 (52%), Gaps = 50/709 (7%)
Query: 12 SRTKKPKLQLRFF----------------SYTNQQTPTQHELDQTFASFHSLPSIP-CLN 54
S+ ++P RFF +Y+N P +FH + + C N
Sbjct: 48 SKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRS-----AIQAFHGMRAEGVCCN 102
Query: 55 LLGL-----CKSTGSLKA-FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP 107
L C L A HA+ + G +D LV+MYG FG + AR VF+
Sbjct: 103 EFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEAD 162
Query: 108 NP-DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
+ + S+ ++ Y ND D ++ + M + F FS V+ AC R+I+ G
Sbjct: 163 SERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGR 222
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+VH +V++G D F LVDMY K + + +F++ D +VVSW ++I+G V N
Sbjct: 223 QVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNG 282
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ L +M+ + N TL S++ AC+ A G+ +HG+++K + + ++
Sbjct: 283 HDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGV 342
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
L+DMY K + DAR VFD + DL+ A+I G + G D+AL LF + +
Sbjct: 343 GLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGV 402
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIF 404
N T+A+VL ++A L + R VH+L +++G + D V+N L+D Y KC ++DA +F
Sbjct: 403 NRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVF 462
Query: 405 ETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQ 447
E S D+IA S+I+ L + PD L S+++ACASL A +
Sbjct: 463 EECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYE 522
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +HA+ K+ +S + + G AL+ YAKCG + A + F ++ E+ V+WSAMIGG
Sbjct: 523 QGKQVHAHLIKRQFMS-DAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGL 581
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G G +L LF M++E + PN + T++L AC+H G+V E + F SM F +
Sbjct: 582 AQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRT 641
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+HY CM+DLL RAG+L++A+E + +MP + + S++GA L ++ +LG++ +K+
Sbjct: 642 EEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLF 701
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L P+K+ +VL++N YAS G W V +VR+LMK + K P S +++
Sbjct: 702 ILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEV 750
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 259/531 (48%), Gaps = 27/531 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S Y AR FD +P+P S+ ++ Y N L + ++ + MR +
Sbjct: 43 LISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F VLK + D G +VH + G G D FV LV MY + +R+VF+
Sbjct: 103 EFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 205 ET-LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
E ++N VSW +++ YV+ND + + +F M ++ + +V AC R +
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H ++++G + + AL+DMY+K G + A +F+++ D+VSW A+I G
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDY 381
+G+ +A++L K++ PN T++S+L A + G ++GR +H I+ +DY
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------D 424
+ LVDMYAK H + DAR +F+ +D+I N++ISG +
Sbjct: 340 IGV-GLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKE 398
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ + TL +V+ + ASL A +HA + K G + + +V L++ Y KC
Sbjct: 399 GLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI-FDAHVVNGLIDSYWKCSCLSD 457
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A VF+ + + ++MI G G++ LF +ML + ++P+ + +++L+AC+
Sbjct: 458 ANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACAS 517
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+G + + + +F+ +V A+ G +E+A ++P
Sbjct: 518 LSAYEQGKQVHAHLIKR-QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 567
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 227/508 (44%), Gaps = 57/508 (11%)
Query: 165 GMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
G +H ++K G SF L+ Y+KCR +R+ FDE D VSW+S++ Y N
Sbjct: 23 GAHLHASLLKSGSLASF-RNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNN 81
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ + F+ MR V N+ L ++ R G +H + G + +
Sbjct: 82 GLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDVFVA 138
Query: 285 TALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
AL+ MY G + DAR VF+E S + VSW ++ Y ++ A+++F + W+
Sbjct: 139 NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P + V++A N+ GR VH++ +R+G + D NALVDMY K + A
Sbjct: 199 QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASV 258
Query: 403 IFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGA 445
IFE + DV++WN++ISG N + P+ TL S++ AC+ GA
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGA 318
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+G +H + K S+ Y+G L++ YAK AR VFD M ++ + +A+I
Sbjct: 319 FDLGRQIHGFMIKAN-ADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH--------------------- 544
G G +L+LF ++ E + N +L + +
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Query: 545 -----TGMVGEGWK--CFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALE-FMENM 594
G++ WK C R F+ S C M+ L++ E A++ FME +
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497
Query: 595 P--IEPDVSLFGAFLHGCGLYSRFDLGE 620
+EPD + + L+ C S ++ G+
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGK 525
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 173/393 (44%), Gaps = 35/393 (8%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIG--IEINSHLVTALLDMYVKCGNIRDARSVFD 305
T+ +T A +AL G LH +LK G +HL++ Y KC AR FD
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLASFRNHLIS----FYSKCRRPCCARRFFD 61
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ VSW++++ Y+ +G P A++ F + N + VL + + +
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARL 118
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGLD 423
G VH++ + G D V NALV MY + DAR +F E SE++ ++WN ++S
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N + P V++AC ++ G +HA + G +V
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG-YDKDV 237
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ AL++ Y K G A ++F+ M + + V+W+A+I G + G ++ L M
Sbjct: 238 FTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYS 297
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY--VCMVDLLARAGRL 584
+ PN ++IL ACS G G + M K Y V +VD+ A+ L
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFM---IKANADSDDYIGVGLVDMYAKNHFL 354
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
++A + + M D+ L A + GC R D
Sbjct: 355 DDARKVFDWM-FHRDLILCNALISGCSHGGRHD 386
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
A T+ ++ A+ A+ G+ LHA K G L+S L++FY+KC AR F
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHASLLKSGSLAS---FRNHLISFYSKCRRPCCARRFF 60
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
D + + V+WS+++ Y G ++ F M E V NE +L
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL 110
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/594 (33%), Positives = 331/594 (55%), Gaps = 24/594 (4%)
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M Y + +++ +++++ + M + ++ DNF LKAC ELR+++ G
Sbjct: 1 MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60
Query: 166 MKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H + K G D +V + L+ MY KC + + ++FDE ++V+W+SM++G+ +
Sbjct: 61 EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120
Query: 224 NDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
N + + F RM V +++TL +LV+AC KL G+ +HG++++ G +
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
LV +LL+ Y K ++A ++F + D++SW+ +I Y Q+G +AL +F D
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
PN T+ VL A A +L GR H L IR GLE + V ALVDMY KC +A
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 402 YIFETTSEKDVIAWNSIISG------------------LDDNVSPDAVTLVSVISACASL 443
+F KDV++W ++ISG L++N PDA+ +V V+ +C+ L
Sbjct: 301 AVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSEL 360
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G ++ H+Y K G SN ++G +L+ Y++CG +A VF+ + K+TV W+++
Sbjct: 361 GFLEQAKCFHSYVIKYGF-DSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSL 419
Query: 504 IGGYGMQGDGGGSLALFSDML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
I GYG+ G G +L F+ M+ + EV+PNEV F +ILSACSH G++ EG + F M D+
Sbjct: 420 ITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDY 479
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
+ P+++HY +VDLL R G L+ A+E + MP P + G L C ++ ++ E +
Sbjct: 480 RLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 539
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
KK+ EL + A YY+L+SN+Y G W V ++R +KQRG+ K SL+++
Sbjct: 540 AKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEI 593
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 209/424 (49%), Gaps = 22/424 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK- 142
+ L+ MY G + A +FD + PD ++ M+ + N VEF++ M
Sbjct: 81 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 140
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D ++ AC +L + G VH +++ G D ++ L++ YAK R +
Sbjct: 141 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 200
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F +K+V+SW+++IA YVQN A E L++FN M + E N T+ ++ ACA
Sbjct: 201 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 260
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L QG+ H ++ G+E + TAL+DMY+KC + +A +VF + D+VSW A+I G
Sbjct: 261 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 320
Query: 322 YTQSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
+T +G ++++ F+ + P+ + + VL + ++LG L + HS I+ G +
Sbjct: 321 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 380
Query: 381 YTVINA-LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------- 422
I A LV++Y++C + +A +F + KD + W S+I+G
Sbjct: 381 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 440
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
V P+ VT +S++SAC+ G + G + L+ N+ L++ + GD
Sbjct: 441 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 500
Query: 482 AQSA 485
+A
Sbjct: 501 LDTA 504
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 4/201 (1%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL- 126
H L I GL T K +T LV MY + A +VF +P D S+ +I + LN +
Sbjct: 268 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 327
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
++ I EF + + D + KVL +C EL +++ H ++K G + F+
Sbjct: 328 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 387
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEG 244
LV++Y++C +G++ +VF+ K+ V WTS+I GY + + L FN M + V+
Sbjct: 388 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 447
Query: 245 NQITLGSLVTACAKLRALHQG 265
N++T S+++AC+ +H+G
Sbjct: 448 NEVTFLSILSACSHAGLIHEG 468
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 223/634 (35%), Positives = 344/634 (54%), Gaps = 27/634 (4%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSM----PNPDFYSFQVMIRWYFL 123
HAL + L +D LV++YG FG V AR +FD + S+ MI Y
Sbjct: 123 HALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVK 182
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
ND D + ++ M + + F FS V+ AC RD++ G +VH +V+ G D F
Sbjct: 183 NDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFT 242
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
LVDMY+K DI + VF++ +VVSW + I+G V + L L +M+ +
Sbjct: 243 ANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGL 302
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N TL S++ ACA A + G+ +HG+++K + + + L+DMY K G + DAR
Sbjct: 303 VPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARK 362
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF--TDKKWADFFPNHVTIASVLSASAQL 360
VFD + DL+ W A+I G + G + L LF K+ D N T+ASVL ++A
Sbjct: 363 VFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASS 422
Query: 361 GNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+ R VH+L ++GL D VIN L+D Y KC + A +F+ + D+I+ +++
Sbjct: 423 EAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMM 482
Query: 420 SGLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+ L + PD+ L S+++AC SL A + G +HA+ K+
Sbjct: 483 TALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQF- 541
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+S+V+ G AL+ YAKCG + A M F + E+ V+WSAMIGG G G +L LF
Sbjct: 542 TSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHR 601
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
ML+E V PN + T++LSAC+H G+V + K F SM F + +HY CM+D+L RAG
Sbjct: 602 MLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAG 661
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
+LE+A+E + NMP + + +++GA L ++ +LG + +K+ L P+K+ +VL++N
Sbjct: 662 KLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLAN 721
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YAS G W + +VR+LMK + K P S V++
Sbjct: 722 TYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEI 755
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 173/591 (29%), Positives = 284/591 (48%), Gaps = 39/591 (6%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L G +S + H+ L+ GL N L+++Y AR+VFD +P+P
Sbjct: 10 ALARFGTSRSLFAGAHLHSHLLKSGLLAGFSN-HLLTLYSRCRLPSAARAVFDEIPDPCH 68
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ ++ Y N + +D + ++ MR R + F VLK ++R G +VH
Sbjct: 69 VSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVR---FGAQVHAL 125
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL----DKNVVSWTSMIAGYVQNDC 226
V D FV LV +Y + +R++FDE + ++N VSW +MI+ YV+ND
Sbjct: 126 AVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQ 185
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ + + +F M N+ +V AC R L G+ +HG +++ G E + A
Sbjct: 186 SGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANA 245
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+DMY K G+I A +VF+++ + D+VSW A I G G+ +AL+L K + PN
Sbjct: 246 LVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPN 305
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
T++SVL A A G N+GR +H ++ + D V LVDMYAK + DAR +F+
Sbjct: 306 VFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFD 365
Query: 406 TTSEKDVIAWNSIIS---------------------GLDDNVSPDAVTLVSVISACASLG 444
+D+I WN++IS GLD +V + TL SV+ + AS
Sbjct: 366 FMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDV--NRTTLASVLKSTASSE 423
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
A+ +HA + K GLLS + +V L++ Y KCG A VF R + ++ + M+
Sbjct: 424 AICHTRQVHALAEKIGLLSDS-HVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMM 482
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G ++ LF ML + ++P+ + +++L+AC+ +G + + + +F
Sbjct: 483 TALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKR-QF 541
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS----LFGAFLHGCG 611
+ +V A+ G +E+A +P VS + G HG G
Sbjct: 542 TSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHG 592
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/522 (27%), Positives = 227/522 (43%), Gaps = 70/522 (13%)
Query: 160 RDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
R + G +H ++K G F L+ +Y++CR ++R VFDE D VSW+S++
Sbjct: 18 RSLFAGAHLHSHLLKSGLLAGFS-NHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVT 76
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
Y N ++ L+ F MR V N+ L ++ +R G +H + +
Sbjct: 77 AYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRF---GAQVHALAVATRLVH 133
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSI----DLVSWTAMIVGYTQSGYPDKALKLF 335
+ + AL+ +Y G + +AR +FDE + + VSW MI Y ++ A+ +F
Sbjct: 134 DVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVF 193
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
+ W+ PN + V++A +L GR VH +R G E D NALVDMY+K
Sbjct: 194 REMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKL 253
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVI 437
I A +FE DV++WN+ ISG + P+ TL SV+
Sbjct: 254 GDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVL 313
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
ACA GA +G +H + K + + +V L++ YAK G AR VFD M ++
Sbjct: 314 KACAGAGAFNLGRQIHGFMVK-AVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDL 372
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNE--EVQPNEVIFTTIL------SACSHT---- 545
+ W+A+I G G G L+LF M E ++ N ++L A HT
Sbjct: 373 ILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVH 432
Query: 546 ----------------GMVGEGWKC--------FYSMCRDFKFVPSMKHYVCMVDLLARA 581
G++ WKC + R + S M+ L++
Sbjct: 433 ALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISS----TTMMTALSQC 488
Query: 582 GRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGE 620
E+A++ M +EPD + + L+ C S ++ G+
Sbjct: 489 DHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGK 530
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/452 (27%), Positives = 213/452 (47%), Gaps = 51/452 (11%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGI--EINSHLVTALLDMYVKCGNIRDARSVFD 305
T+GS + R+L G LH ++LK G+ ++HL+T +Y +C AR+VFD
Sbjct: 6 TIGSALARFGTSRSLFAGAHLHSHLLKSGLLAGFSNHLLT----LYSRCRLPSAARAVFD 61
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ VSW++++ Y+ +G P AL F + N + VL + ++
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAP---DVRF 118
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFE----TTSEKDVIAWNSIIS 420
G VH+L + L D V NALV +Y ++ +AR +F+ E++ ++WN++IS
Sbjct: 119 GAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMIS 178
Query: 421 G-LDDNVSPDAVTLVS----------------VISACASLGAVQVGSSLHAYSTKQGLLS 463
+ ++ S DA+ + V++AC ++ G +H + G
Sbjct: 179 AYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTG-YE 237
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+V+ AL++ Y+K GD + A VF+ M + V+W+A I G G +L L M
Sbjct: 238 KDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQM 297
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR---DF-KFVPSMKHYVCMVDLLA 579
+ + PN +++L AC+ G G + M + DF +FV V +VD+ A
Sbjct: 298 KSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVA-----VGLVDMYA 352
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV------MIKKMLELHPDK 633
+ G L++A + + MP D+ L+ A + GC R GEV M K+ L+L ++
Sbjct: 353 KHGFLDDARKVFDFMP-RRDLILWNALISGCSHDGRH--GEVLSLFHRMRKEGLDLDVNR 409
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
++ + +S+ QV L ++ GL
Sbjct: 410 TTLASVLKSTASSEA-ICHTRQVHALAEKIGL 440
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/680 (33%), Positives = 360/680 (52%), Gaps = 34/680 (5%)
Query: 25 SYTNQQTPTQHELDQTFASFHSLPSIP-CLNLLGL-----CKSTGSLKA-FHALLIVDGL 77
+Y+N P +FH + + C N L C L A HA+ + G
Sbjct: 77 AYSNNGLPRS-----AIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGF 131
Query: 78 TNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFLNDLYKDIVEFYK 135
+D LV+MYG FG + AR VFD + + S+ ++ Y ND D ++ +
Sbjct: 132 GSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFG 191
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCR 194
M + F FS V+ AC R+ID G +VH +V++G D F LVDMY K
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMG 251
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
+ + +F++ D +VVSW ++I+G V N + L +M+ + N L S++
Sbjct: 252 RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILK 311
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
ACA A G+ +HG+++K + + ++ L+DMY K + DA VFD + DL+
Sbjct: 312 ACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLIL 371
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W A+I G + G D+A +F + N T+A+VL ++A L + R VH+L
Sbjct: 372 WNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAE 431
Query: 375 RLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD--------- 424
++G + D V+N L+D Y KC ++DA +FE S D+IA S+I+ L
Sbjct: 432 KIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIK 491
Query: 425 --------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ PD L S+++ACASL A + G +HA+ K+ +S + + G AL+ Y
Sbjct: 492 LFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS-DAFAGNALVYTY 550
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG + A + F ++ E+ V+WSAMIGG G G +L LF M++E + PN + T
Sbjct: 551 AKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMT 610
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
++L AC+H G+V E + F SM F + +HY CM+DLL RAG+L++A+E + +MP
Sbjct: 611 SVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 670
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
+ + S++GA L ++ +LG++ +K+ L P+K+ +VL++N YAS G W V +V
Sbjct: 671 QANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKV 730
Query: 657 RELMKQRGLSKSPGCSLVDL 676
R+LMK + K P S V++
Sbjct: 731 RKLMKDSNIKKEPAMSWVEV 750
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 265/549 (48%), Gaps = 28/549 (5%)
Query: 68 FHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA L+ G N L+S Y AR VFD +P+P S+ ++ Y N L
Sbjct: 26 LHANLLKSGFLASLRN-HLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLP 84
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ ++ + MR + F VLK + D G +VH + G G D FV L
Sbjct: 85 RSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANAL 141
Query: 187 VDMYAKCRDIGSSRQVFDET-LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
V MY + +R+VFDE ++N VSW +++ YV+ND + + +F M ++
Sbjct: 142 VAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPT 201
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ +V AC R + G+ +H ++++G E + AL+DMYVK G + A +F+
Sbjct: 202 EFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFE 261
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
++ D+VSW A+I G +G+ +A++L K + PN ++S+L A A G ++
Sbjct: 262 KMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDL 321
Query: 366 GRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
GR +H I+ +DY + LVDMYAK H + DA +F+ S +D+I WN++ISG
Sbjct: 322 GRQIHGFMIKANADSDDYIGV-GLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCS 380
Query: 424 -----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
+ + + TL +V+ + ASL A +HA + K G + +
Sbjct: 381 HGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFI-FDA 439
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+V L++ Y KC A VF+ + + ++MI G G++ LF +ML +
Sbjct: 440 HVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRK 499
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
++P+ + +++L+AC+ +G + + + +F+ +V A+ G +E+
Sbjct: 500 GLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR-QFMSDAFAGNALVYTYAKCGSIED 558
Query: 587 ALEFMENMP 595
A ++P
Sbjct: 559 AELAFSSLP 567
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 226/508 (44%), Gaps = 57/508 (11%)
Query: 165 GMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
G +H ++K G S + L+ Y+KCR +R+VFDE D VSW+S++ Y N
Sbjct: 23 GAHLHANLLKSGFLAS-LRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNN 81
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ + F+ MR V N+ L +V C L G +H + G + +
Sbjct: 82 GLPRSAIQAFHGMRAEGVCCNEFAL-PVVLKCVPDAQL--GAQVHAMAMATGFGSDVFVA 138
Query: 285 TALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
AL+ MY G + DAR VFDE S + VSW ++ Y ++ A+++F + W+
Sbjct: 139 NALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P + V++A N++ GR VH++ +R+G E D NALVDMY K + A
Sbjct: 199 QPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASV 258
Query: 403 IFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGA 445
IFE + DV++WN++ISG + P+ L S++ ACA GA
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGA 318
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+G +H + K S+ Y+G L++ YAK A VFD M ++ + W+A+I
Sbjct: 319 FDLGRQIHGFMIKAN-ADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH--------------------- 544
G G + ++F + E + N +L + +
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437
Query: 545 -----TGMVGEGWK--CFYSMCRDFKFVPS--MKHYVCMVDLLARAGRLEEALE-FMENM 594
G++ WK C R F+ S + M+ L++ E A++ FME +
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 497
Query: 595 --PIEPDVSLFGAFLHGCGLYSRFDLGE 620
+EPD + + L+ C S ++ G+
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGK 525
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 178/393 (45%), Gaps = 35/393 (8%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGI--EINSHLVTALLDMYVKCGNIRDARSVFD 305
T+ +T A +AL G LH +LK G + +HL++ Y KC AR VFD
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHANLLKSGFLASLRNHLIS----FYSKCRRPCCARRVFD 61
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ VSW++++ Y+ +G P A++ F + N + VL + + +
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQL 118
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGLD 423
G VH++ + G D V NALV MY + DAR +F E SE++ ++WN ++S
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 178
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N + P V++AC + G +HA + G +V
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMG-YEKDV 237
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ AL++ Y K G A ++F+ M + + V+W+A+I G + G ++ L M +
Sbjct: 238 FTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSS 297
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY--VCMVDLLARAGRL 584
+ PN + ++IL AC+ G G + M K Y V +VD+ A+ L
Sbjct: 298 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFM---IKANADSDDYIGVGLVDMYAKNHFL 354
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
++A++ + M D+ L+ A + GC R D
Sbjct: 355 DDAMKVFDWMS-HRDLILWNALISGCSHGGRHD 386
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
A T+ ++ A+ A+ G+ LHA K G L+S + L++FY+KC AR VF
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHANLLKSGFLAS---LRNHLISFYSKCRRPCCARRVF 60
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
D + + V+WS+++ Y G ++ F M E V NE +L
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL 110
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/632 (33%), Positives = 337/632 (53%), Gaps = 21/632 (3%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA I G +D + LV +Y G + A VF MP + S+ ++ +
Sbjct: 249 KQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQM 308
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVL 183
+ ++ + M F S VLK C ++ G VH +++G D F+
Sbjct: 309 GDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFIS 368
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
LVDMY+KC G + +VF D +VVSW+++I Q ++E +F RMR V
Sbjct: 369 CCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVI 428
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
NQ TL SLV+A L L+ G+ +H + K G E ++ + AL+ MY+K G+++D V
Sbjct: 429 PNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+ + DL+SW A++ G+ + D L++F F PN T S+L + + L ++
Sbjct: 489 FEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 548
Query: 364 NMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
++G+ VH+ ++ L+ + ALVDMYAK + DA IF ++D+ AW I++G
Sbjct: 549 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 608
Query: 423 -----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+ V P+ TL S +S C+ + + G LH+ + K G S +
Sbjct: 609 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ-SGD 667
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
++V +AL++ YAKCG + A +VFD + ++TV+W+ +I GY G GG +L F ML+
Sbjct: 668 MFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLD 727
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
E P+EV F +LSACSH G++ EG K F S+ + + P+++HY CMVD+L RAG+
Sbjct: 728 EGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFH 787
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
E F+E M + +V ++ L C ++ + GE K+ EL P+ Y+L+SN++A
Sbjct: 788 EVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFA 847
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ G W V VR LM RG+ K PGCS V+++
Sbjct: 848 AKGMWDDVTNVRALMSTRGVKKEPGCSWVEVN 879
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 180/556 (32%), Positives = 285/556 (51%), Gaps = 25/556 (4%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C S G L KA H +I G+ D LV++Y G YA VF +P D
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ +I + V + MR+ E + F ++ LKAC D++ G +VH
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 171 EIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
E +KVG D FV + LVD+YAKC ++ + +VF +N VSW +++ G+ Q A++
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L LF RM + ++ TL +++ CA L G+ +H ++IG E++ + L+D
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG DA VF + D+VSW+A+I Q G +A ++F + + PN T
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+AS++SA+ LG+L G +H+ + G E D TV NALV MY K + D +FE T+
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+D+I+WN+++SG DN +P+ T +S++ +C+SL V +G
Sbjct: 494 NRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 553
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+HA K L N +VGTAL++ YAK + A +F+ + +++ W+ ++ GY G
Sbjct: 554 VHAQIVKNS-LDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDG 612
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G ++ F M E V+PNE + LS CS + G + +SM M
Sbjct: 613 QGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ-LHSMAIKAGQSGDMFVA 671
Query: 572 VCMVDLLARAGRLEEA 587
+VD+ A+ G +E+A
Sbjct: 672 SALVDMYAKCGCVEDA 687
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 164/520 (31%), Positives = 265/520 (50%), Gaps = 35/520 (6%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+S +L+ C D++EG +H +++K G PDS + LV++YAKC + +VF E
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+++VVSWT++I G+V + LF MR VE N+ T + + AC+ L GK
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H +K+G + + +AL+D+Y KCG + A VF + + VSW A++ G+ Q G
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
+K L LF ++ + T+++VL A GNL G++VHSL IR+G E D +
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
LVDMY+KC + DA +F + DV++W++II+ LD V P+
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
TL S++SA LG + G S+HA K G N V AL+ Y K G Q VF
Sbjct: 431 QFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNT-VCNALVTMYMKIGSVQDGCRVF 489
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+A ++ ++W+A++ G+ L +F+ ML E PN F +IL +CS V
Sbjct: 490 EATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVD 549
Query: 550 EGWKCFYSMCRDF----KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G + + ++ FV + +VD+ A+ LE+A E + N I+ D+ +
Sbjct: 550 LGKQVHAQIVKNSLDGNDFVGTA-----LVDMYAKNRFLEDA-ETIFNRLIKRDLFAWTV 603
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPD--KACYYVLVSNL 643
+ G Y++ GE +K +++ + K + L S+L
Sbjct: 604 IVAG---YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSL 640
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 221/662 (33%), Positives = 349/662 (52%), Gaps = 30/662 (4%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C T L K H +++V G +D+ LV +Y G ARS+FD++P+
Sbjct: 15 SVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDR 74
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
S+ + Y +D++ + V + M + F S ++ C L D +G K+H
Sbjct: 75 SVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIH 134
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
++K+G D+F LVDMYAK + + VFDE ++VSW ++IAG V ++
Sbjct: 135 GYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHH 194
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
L L M + + N TL S + ACA + G+ LH ++K+ + +S L L+
Sbjct: 195 RALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLI 254
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KC ++ DAR VF + D+++W A+I G++Q+ ++A LF N
Sbjct: 255 DMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQT 314
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
T+++VL + A L M R +H+L ++ G E D V+N+L+D Y KC + DA +FE +
Sbjct: 315 TLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEES 374
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
D++ + S+++ D + PD+ S+++ACASL A + G
Sbjct: 375 PIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGK 434
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H + K G +S +++ G +L+N YAKCG + A F + + V+WSAMIGG
Sbjct: 435 QVHVHILKFGFMS-DIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQH 493
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L LF ML V PN + ++L AC+H G+V E F SM F P +H
Sbjct: 494 GYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEH 553
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CM+DLL RAG+LE A+E + MP + + ++GA L ++ DLGE + +L L
Sbjct: 554 YACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLALE 613
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSF 684
P+K+ +VL++N+YAS G W +V +VR LMK + K PG S +++ I D S
Sbjct: 614 PEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDRSH 673
Query: 685 SR 686
SR
Sbjct: 674 SR 675
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 156/504 (30%), Positives = 267/504 (52%), Gaps = 22/504 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ F F VLKAC +D+ G +VH +V G D FV LV +YAKC G +R +F
Sbjct: 9 NEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLF 68
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D D++VVSW ++ + YV +D E + LF+ M + N+ +L S++ C L
Sbjct: 69 DAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSV 128
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QG+ +HGY++K+G + ++ AL+DMY K G + DA SVFDE+ D+VSW A+I G
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
Y +AL+L + + PN T++S L A A + +GR +HS I++ + +
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF 248
Query: 384 IN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
+ L+DMY+KC+ + DAR +F+ E+D+IAWN++ISG N
Sbjct: 249 LGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ + TL +V+ + A+L A + +HA S K G N YV +L++ Y KCG + A
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDN-YVVNSLIDTYGKCGHVEDA 367
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF+ + V +++++ Y G G +L L+ +M + ++P+ + +++L+AC+
Sbjct: 368 TRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASL 427
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
+G + + + F F+ + +V++ A+ G +E+A +P+ VS + A
Sbjct: 428 SAYEQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVS-WSA 485
Query: 606 FLHGCGLYSRFDLGEVMIKKMLEL 629
+ G + + K+ML++
Sbjct: 486 MIGGLAQHGYGKEALQLFKQMLKV 509
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 202/409 (49%), Gaps = 28/409 (6%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
++ N+ S++ AC + L GK +HG ++ G + + + +L+ +Y KCG DAR
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
S+FD + +VSW A+ Y S +A+ LF D + PN +++S+++ L
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLE 125
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+ GR +H I+LG + D NALVDMYAK ++ DA +F+ ++ D+++WN+II+
Sbjct: 126 DSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIA 185
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G + P+ TL S + ACA + ++G LH+ K +
Sbjct: 186 GCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMD-MG 244
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
S+ ++G L++ Y+KC AR+VF M E++ + W+A+I G+ + + +LF M
Sbjct: 245 SDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLM 304
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARA 581
E + N+ +T+L + + + + C K +YV ++D +
Sbjct: 305 HTEGIGFNQTTLSTVLKSIA---ALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKC 361
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
G +E+A E PI D+ LF + + Y++ GE ++ LE+
Sbjct: 362 GHVEDATRVFEESPI-VDLVLFTSLVTA---YAQDGQGEEALRLYLEMQ 406
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/669 (33%), Positives = 359/669 (53%), Gaps = 33/669 (4%)
Query: 35 HEL---DQTFASFHSLPSIPCLNLLGLCKSTGSLKA---FHALLIVDGLTNDKC-NTKLV 87
HE+ DQT S PS+ L C G L H +I G +D T L+
Sbjct: 88 HEMVYQDQTQISNFVFPSV-----LKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLL 142
Query: 88 SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
MYG + A FD+MP D ++ ++ + N + ++ + M E D+
Sbjct: 143 CMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSV 202
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDET 206
V +AC EL + G VH +V+ + L L+ MY K D+ S+ ++F+
Sbjct: 203 TMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENV 262
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ WT MI+ Y Q+ C QE L +F +M+E +E NQ+T+ ++ ACA+L + +G+
Sbjct: 263 PCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGR 322
Query: 267 WLHGYILKIGIEIN-SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+HG++++ ++ L AL+++Y GN+RD VF+ + ++SW +I +T++
Sbjct: 323 SVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRN 382
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN 385
G P++AL LF + P+ ++AS LSA + +G +H I+ G + V N
Sbjct: 383 GQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQN 442
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSP 428
AL+DMYAKC + A +FE EK ++ WNS+I G N V
Sbjct: 443 ALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKM 502
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D +T +SVI AC+ LG ++ G +H GL + Y+ TAL + Y+KCG+ Q A V
Sbjct: 503 DKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGL-RKDSYLDTALTDMYSKCGELQMAHGV 561
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
FD M E++ V+WS MI GYGM G +++LF+ ML ++PN++ F ILSACSH G V
Sbjct: 562 FDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAV 621
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
EG K +++ +F P H+ CMVDLL+RAG L A + + ++P + S++GA L+
Sbjct: 622 EEG-KLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLN 680
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
GC ++ R D+ + + K +L++ YY L+SN+YA +G W + +VR +MK +GL K
Sbjct: 681 GCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKV 740
Query: 669 PGCSLVDLD 677
PG S +++D
Sbjct: 741 PGYSTIEID 749
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 185/602 (30%), Positives = 314/602 (52%), Gaps = 36/602 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
+ L C ++ +L HA L + GL + +TKL+ Y G + ++ VFD+ P PD
Sbjct: 5 MPLFRRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDS 64
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH-DNFVFSKVLKACCELRDIDEGMKVHC 170
+ + V+I+ Y +++ V Y M + + NFVF VLKAC D+ G KVH
Sbjct: 65 FMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHG 124
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
++K G D+ V T L+ MY + + + + FD ++VV+W+S++ +VQN A E
Sbjct: 125 RVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASE 184
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
GL +F++M VE + +T+ S+ AC++L +L G+ +HGY+++ IE N+ L +L+
Sbjct: 185 GLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIV 244
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY K G++ A +F+ + WT MI Y QSG +AL +F + PN VT
Sbjct: 245 MYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVT 304
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE---DYTVINALVDMYAKCHVIADARYIFET 406
+ VL A A+LG + GR VH IR ++ D+ + AL+++YA + D +FET
Sbjct: 305 MVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDF-LGPALMELYADTGNLRDCHKVFET 363
Query: 407 TSEKDVIAWNSIISGLDDNVSPDAVTLVSV-----------------ISACASLGAVQVG 449
EK +++WN++IS N P+ L+ V +SAC ++ Q+G
Sbjct: 364 IKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 423
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+ +H Y K G + N +V AL++ YAKCG SA +F+ ++EK+ VTW++MI G+
Sbjct: 424 AQIHGYIIKTG--NFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQ 481
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG-W---KCFYSMCRDFKFV 565
G ++ LF M V+ +++ F +++ ACSH G + +G W K R ++
Sbjct: 482 NGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYL 541
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
+ + D+ ++ G L+ A + M E + + + G G++ + + + +
Sbjct: 542 DT-----ALTDMYSKCGELQMAHGVFDRMS-ERSIVSWSVMIAGYGMHGQINATISLFNQ 595
Query: 626 ML 627
ML
Sbjct: 596 ML 597
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 226/680 (33%), Positives = 364/680 (53%), Gaps = 34/680 (5%)
Query: 25 SYTNQQTPTQHELDQTFASFHSLPSIP-CLNLLGL-----CKSTGSLKA-FHALLIVDGL 77
+Y+N P +FH + + C N L C L A HA+ + G
Sbjct: 77 AYSNNGLPRS-----AIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGF 131
Query: 78 TNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFLNDLYKDIVEFYK 135
+D LV+MYG FG + AR VF+ + + S+ ++ Y ND D ++ +
Sbjct: 132 GSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFG 191
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCR 194
M + F FS V+ AC R+I+ G +VH +V++G D F LVDMY K
Sbjct: 192 EMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMG 251
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
+ + +F++ D +VVSW ++I+G V N + L +M+ + N TL S++
Sbjct: 252 RVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILK 311
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
AC+ A G+ +HG+++K + + ++ L+DMY K + DAR VFD + DL+
Sbjct: 312 ACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLIL 371
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
A+I G + G D+AL LF + + N T+A+VL ++A L + R VH+L +
Sbjct: 372 CNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAV 431
Query: 375 RLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD--------- 424
++G + D V+N L+D Y KC ++DA +FE S D+IA S+I+ L
Sbjct: 432 KIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIK 491
Query: 425 --------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ PD L S+++ACASL A + G +HA+ K+ +S + + G AL+ Y
Sbjct: 492 LFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS-DAFAGNALVYTY 550
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG + A + F ++ E+ V+WSAMIGG G G +L LF M++E + PN + T
Sbjct: 551 AKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMT 610
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
++L AC+H G+V E + F SM F + +HY CM+DLL RAG+L++A+E + +MP
Sbjct: 611 SVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 670
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
+ + S++GA L ++ +LG++ +K+ L P+K+ +VL++N YAS G W V +V
Sbjct: 671 QANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKV 730
Query: 657 RELMKQRGLSKSPGCSLVDL 676
R+LMK + K P S +++
Sbjct: 731 RKLMKDSNIKKEPAMSWIEV 750
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 144/531 (27%), Positives = 260/531 (48%), Gaps = 27/531 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S Y AR VFD +P+P S+ ++ Y N L + ++ + MR +
Sbjct: 43 LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F VLK + D G +VH + G G D FV LV MY + +R+VF+
Sbjct: 103 EFALPVVLKC---VPDARLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFN 159
Query: 205 ET-LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
E ++N VSW +++ YV+ND + + +F M ++ + +V AC R +
Sbjct: 160 EADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIE 219
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H ++++G + + AL+DMY+K G + A +F+++ D+VSW A+I G
Sbjct: 220 AGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDY 381
+G+ +A++L K++ PN T++S+L A + G ++GR +H I+ +DY
Sbjct: 280 LNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDY 339
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------D 424
+ LVDMYAK H + DAR +F+ +D+I N++ISG +
Sbjct: 340 IGV-GLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKE 398
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ + TL +V+ + ASL A +HA + K G + + +V L++ Y KC
Sbjct: 399 GLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFI-FDAHVVNGLIDSYWKCSCLSD 457
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A VF+ + + ++MI G G++ LF +ML + ++P+ + +++L+AC+
Sbjct: 458 ANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACAS 517
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+G + + + +F+ +V A+ G +E+A ++P
Sbjct: 518 LSAYEQGKQVHAHLIKR-QFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP 567
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 228/508 (44%), Gaps = 57/508 (11%)
Query: 165 GMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
G +H ++K G SF L+ Y+KCR +R+VFDE D VSW+S++ Y N
Sbjct: 23 GAHLHASLLKSGSLASF-RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNN 81
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ + F+ MR V N+ L ++ R G +H + G + +
Sbjct: 82 GLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQVHAMAMATGFGSDVFVA 138
Query: 285 TALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
AL+ MY G + DAR VF+E S + VSW ++ Y ++ A+++F + W+
Sbjct: 139 NALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGI 198
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P + V++A N+ GR VH++ +R+G + D NALVDMY K + A
Sbjct: 199 QPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASV 258
Query: 403 IFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGA 445
IFE + DV++WN++ISG N + P+ TL S++ AC+ GA
Sbjct: 259 IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGA 318
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+G +H + K S+ Y+G L++ YAK AR VFD M ++ + +A+I
Sbjct: 319 FDLGRQIHGFMIKAN-ADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH--------------------- 544
G G +L+LF ++ E + N +L + +
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437
Query: 545 -----TGMVGEGWK--CFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALE-FMENM 594
G++ WK C R F+ S C M+ L++ E A++ FME +
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497
Query: 595 P--IEPDVSLFGAFLHGCGLYSRFDLGE 620
+EPD + + L+ C S ++ G+
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGK 525
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 174/393 (44%), Gaps = 35/393 (8%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIG--IEINSHLVTALLDMYVKCGNIRDARSVFD 305
T+ +T A +AL G LH +LK G +HL++ Y KC AR VFD
Sbjct: 6 TISQQLTRYAAAQALLPGAHLHASLLKSGSLASFRNHLIS----FYSKCRRPCCARRVFD 61
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ VSW++++ Y+ +G P A++ F + N + VL + + +
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARL 118
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGLD 423
G VH++ + G D V NALV MY + DAR +F E SE++ ++WN ++S
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYV 178
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N + P V++AC ++ G +HA + G +V
Sbjct: 179 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMG-YDKDV 237
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ AL++ Y K G A ++F+ M + + V+W+A+I G + G ++ L M
Sbjct: 238 FTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYS 297
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY--VCMVDLLARAGRL 584
+ PN ++IL ACS G G + M K Y V +VD+ A+ L
Sbjct: 298 GLVPNVFTLSSILKACSGAGAFDLGRQIHGFM---IKANADSDDYIGVGLVDMYAKNHFL 354
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
++A + + M D+ L A + GC R D
Sbjct: 355 DDARKVFDWM-FHRDLILCNALISGCSHGGRHD 386
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
A T+ ++ A+ A+ G+ LHA K G L+S L++FY+KC AR VF
Sbjct: 4 AGTISQQLTRYAAAQALLPGAHLHASLLKSGSLAS---FRNHLISFYSKCRRPCCARRVF 60
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
D + + V+WS+++ Y G ++ F M E V NE +L
Sbjct: 61 DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVL 110
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 228/704 (32%), Positives = 372/704 (52%), Gaps = 65/704 (9%)
Query: 27 TNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKL 86
T+++T Q + + + S P PC K L++ H + + N +L
Sbjct: 20 TDERTVQQVIMHKFSSKVLSFPHNPC-------KFMAFLRSIHTTTAASYESIYQTN-QL 71
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-------LNDLYK----------- 128
++ G V AR +FD MP D YS+ MI Y +L+
Sbjct: 72 LNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWS 131
Query: 129 -------------DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
+ + ++ MR + F VL+ C L I G +H +VK
Sbjct: 132 SIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKN 191
Query: 176 G-GPDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
G + FV+TGLVDMYAKC+ + + +F E KN V WT+M+ GY QN + +
Sbjct: 192 GFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVE 251
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
F M VE NQ T +++TAC+ + A G+ +HG+I+K G N ++ +AL+DMY
Sbjct: 252 FFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYA 311
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
KCG++++A+++ + + D+VSW +++VG+ + G ++AL+LF + + + T S
Sbjct: 312 KCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPS 371
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKD 411
VL+ +G++N + VH L I+ G E+Y ++ NALVDMYAK + A +FE EKD
Sbjct: 372 VLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKD 429
Query: 412 VIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA 454
VI+W S+++G N V+PD + S++SACA L ++ G +H
Sbjct: 430 VISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHL 489
Query: 455 YSTKQGL-LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
K GL S +VY +L+ YAKCG A +F +M+ K+ +TW+A+I GY G G
Sbjct: 490 DFIKSGLRWSQSVY--NSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKG 547
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
SL + M++ +P+ + F +L ACSH G+V EG K F M + + P +HY C
Sbjct: 548 RNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYAC 607
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
M+DL R+G+L+EA + ++ M ++PD +++ + L C ++ +L E + EL P
Sbjct: 608 MIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMN 667
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
A YV++SN+Y++ +W V ++R+LMK +G+ K PGCS ++++
Sbjct: 668 AMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEIN 711
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/617 (34%), Positives = 340/617 (55%), Gaps = 26/617 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLK 142
T L+ Y G++ YAR VFD++P ++ MI + Y + FY+ M +
Sbjct: 187 TLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVV 246
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
D ++ S VL AC L ++ G ++H I++ G D+ ++ L+D Y KC + ++ +
Sbjct: 247 P-DGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FD +KN++SWT++++GY QN +E + LF M + ++ + S++T+CA L A
Sbjct: 306 LFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHA 365
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G +H Y +K + +S++ +L+DMY KC + +AR VFD + D+V + AMI G
Sbjct: 366 LEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEG 425
Query: 322 YTQSGYP---DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
Y++ G AL +F D ++ P+ +T S+L ASA L +L + + +H L + GL
Sbjct: 426 YSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGL 485
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------------LD 423
D +AL+ +Y+ C+ + D+R +F+ KD++ WNS+ SG L+
Sbjct: 486 NLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLE 545
Query: 424 DNVS---PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+S PD T V +++A +L ++Q+G H K+GL N Y+ ALL+ YAKCG
Sbjct: 546 LQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGL-ECNPYITNALLDMYAKCG 604
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ A FD+ ++ V W+++I Y G+G +L + M+ E ++PN + F +LS
Sbjct: 605 SPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLS 664
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSH G+V +G K F M R F P +HYVCMV LL RAGRL EA E +E MP +P
Sbjct: 665 ACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAA 723
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++ + L GC +L E + + P + + L+SN+YAS G W +VRE M
Sbjct: 724 IVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERM 783
Query: 661 KQRGLSKSPGCSLVDLD 677
K G+ K PG S ++++
Sbjct: 784 KFEGVVKEPGRSWIEIN 800
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 191/656 (29%), Positives = 322/656 (49%), Gaps = 68/656 (10%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H +IV GL D + L+++Y G + YAR VF+ MP + ++ M+ + Y
Sbjct: 67 HGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGFY 126
Query: 128 KD-IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVL 183
++ +V F R R + ++ S ++AC L M + V D +V
Sbjct: 127 EESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYVG 186
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L+D Y K +I +R VFD +K+ V+WT+MI+G V+ + L LF ++ EG V
Sbjct: 187 TLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNVV 246
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ L ++++AC+ L L GK +H +IL+ G E ++ L+ L+D YVKCG +R A +
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKL 306
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
FD + + +++SWT ++ GY Q+ +A++LFT P+ +S+L++ A L L
Sbjct: 307 FDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHAL 366
Query: 364 NMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG- 421
G VH+ I+ L D V N+L+DMYAKC + +AR +F+ + DV+ +N++I G
Sbjct: 367 EFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGY 426
Query: 422 --------LDDN-----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
L D + P +T VS++ A ASL ++ + +H K G L
Sbjct: 427 SRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFG-L 485
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ +++ G+AL+ Y+ C + +R+VFD M+ K+ V W++M GY Q + +L LF +
Sbjct: 486 NLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLE 545
Query: 523 MLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWKC----------FYSMC-- 559
+ +P+E F +++A H ++ G +C Y+ C
Sbjct: 546 LQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 560 -----RDFKFVPSMKHYVC---MVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLH 608
+ F S + VC ++ A G +AL+ +E M IEP+ F L
Sbjct: 606 PEDAHKAFDSAAS-RDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLS 664
Query: 609 GCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
C + G + ML + P+ Y +VS L GR R+N+ REL+++
Sbjct: 665 ACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLL----GRAGRLNEARELIEK 716
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 212/485 (43%), Gaps = 36/485 (7%)
Query: 29 QQTPTQHELDQTFASFHSLPSIP----CLNLLGLCKSTGSLK---AFHALLIVDGLTNDK 81
+Q E + F S P C ++L C S +L+ HA I L ND
Sbjct: 326 KQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDS 385
Query: 82 CNTK-LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYK--DIVEFYKCM 137
T L+ MY + AR VFD D F MI Y L ++ D + + M
Sbjct: 386 YVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDM 445
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
R RL F +L+A L + ++H + K G D F + L+ +Y+ C +
Sbjct: 446 RFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCL 505
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
SR VFDE K++V W SM +GYVQ +E L LF ++ ++ T +VTA
Sbjct: 506 KDSRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAA 565
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
L +L G+ H +LK G+E N ++ ALLDMY KCG+ DA FD S D+V W
Sbjct: 566 GNLASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWN 625
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++I Y G KAL++ PN++T VLSA + G + G L +R
Sbjct: 626 SVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRF 685
Query: 377 GLEDYTV-INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVS 435
G+E T +V + + + +AR + E K P A+ S
Sbjct: 686 GIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTK-----------------PAAIVWRS 728
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG--TALLNFYAKCGDAQSARMVFDAMR 493
++S CA G V+ L Y+ + +LS G T L N YA G A+ V + M+
Sbjct: 729 LLSGCAKAGNVE----LAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMK 784
Query: 494 EKNTV 498
+ V
Sbjct: 785 FEGVV 789
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 179/372 (48%), Gaps = 31/372 (8%)
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG I+ G+E++++L L+++Y + G + AR VF+++ +LV+W+ M+ G+
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 328 PDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLN--MGRMVHSLGIRLGLE-DYTV 383
+++L +F D + PN ++S + A + L M + S ++ + D V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
L+D Y K I AR +F+ EK + W ++ISG ++ NV
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD L +V+SAC+ L ++ G +HA+ + G + + L++ Y KCG ++A
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYG-HEKDASLMNVLIDSYVKCGRVRAAH 304
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+FD M KN ++W+ ++ GY ++ LF+ M ++P+ ++IL++C+
Sbjct: 305 KLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLH 364
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+ G + K YV ++D+ A+ L EA + + + DV LF
Sbjct: 365 ALEFGTQVH---AYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAAD-DVVLFN 420
Query: 605 AFLHGCGLYSRF 616
A + G YSR
Sbjct: 421 AMIEG---YSRL 429
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 345/610 (56%), Gaps = 21/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV MY G + AR VFD MP D S+ +I Y + Y++ +E Y ++ D
Sbjct: 147 LVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPD 206
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
+F S VL A L + +G +H +K G V+ LV MY K R +R+VFD
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD 266
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E ++ VS+ +MI GY++ + +E + +F + F + + +T+ S++ AC LR L
Sbjct: 267 EMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF-KPDLLTVSSVLRACGHLRDLSL 325
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
K+++ Y+LK G + S + L+D+Y KCG++ AR VF+ + D VSW ++I GY Q
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTV 383
SG +A+KLF + +H+T ++S S +L +L G+ +HS GI+ G+ D +V
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSV 445
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNV 426
NAL+DMYAKC + D+ IF + D + WN++IS GL V
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T + + CASL A ++G +H + G S + +G AL+ Y+KCG +++
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY-ESELQIGNALIEMYSKCGCLENSS 564
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ M ++ VTW+ MI YGM G+G +L F+DM + P+ V+F I+ ACSH+G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG CF M +K P ++HY C+VDLL+R+ ++ +A EF++ MPI+PD S++ +
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C + E + ++++EL+PD Y +L SN YA+ +W +V+ +R+ +K + ++
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHIT 744
Query: 667 KSPGCSLVDL 676
K+PG S +++
Sbjct: 745 KNPGYSWIEV 754
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 173/602 (28%), Positives = 304/602 (50%), Gaps = 33/602 (5%)
Query: 65 LKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVMIRWYF 122
L+ HAL+I GL ++D + KL+ Y F + SVF + P + Y + +IR +
Sbjct: 23 LRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFS 82
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N L+ + +EFY +R+ D + F V+KAC L D + G V+ +I+ +G D F
Sbjct: 83 KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V LVDMY++ + +RQVFDE +++VSW S+I+GY + +E L +++ ++ +
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T+ S++ A L + QG+ LHG+ LK G+ + L+ MY+K DAR
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFDE+ D VS+ MI GY + ++++++F + F P+ +T++SVL A L
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLR 321
Query: 362 NLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L++ + +++ ++ G + + TV N L+D+YAKC + AR +F + KD ++WNSIIS
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G + D +T + +IS L ++ G LH+ K G +
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG-IC 440
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
++ V AL++ YAKCG+ + +F +M +TVTW+ +I GD L + + M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
EV P+ F L C+ G + + R F + ++ ++++ ++ G
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGC 559
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH-----PDKACYYV 638
LE + E M DV + ++ G+Y GE ++ ++ PD +
Sbjct: 560 LENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIA 615
Query: 639 LV 640
++
Sbjct: 616 II 617
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 255/515 (49%), Gaps = 38/515 (7%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDE-TLDK 209
+ +A +++E ++H ++ +G S +G L+D Y+ R+ SS VF + K
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
NV W S+I + +N E L + ++RE V ++ T S++ ACA L G ++
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
IL +G E + + AL+DMY + G + AR VFDE+ DLVSW ++I GY+ GY +
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LGLEDYTVINALV 388
+AL+++ + K + P+ T++SVL A L + G+ +H ++ V N LV
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISG---LD-------------DNVSPDAVT 432
MY K DAR +F+ +D +++N++I G L+ D PD +T
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLT 309
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ SV+ AC L + + ++ Y K G + + V L++ YAKCGD +AR VF++M
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVFNSM 368
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH-------T 545
K+TV+W+++I GY GD ++ LF M+ E Q + + + ++S +
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+ G K +C D + ++D+ A+ G + ++L+ +M D +
Sbjct: 429 GLHSNGIKS--GICIDLSVSNA------LIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNT 479
Query: 606 FLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYV 638
+ C + F G + +M E+ PD A + V
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLV 514
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 227/648 (35%), Positives = 340/648 (52%), Gaps = 30/648 (4%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLV------SMYGSFGHVKYARSVFDSMP 107
NL+ C S SLK + I D + C LV +MYG G +K AR FD+M
Sbjct: 162 NLILACTSIRSLK--YGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQ 219
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ S+ +MI Y N D + Y M + D F ++KACC DID G +
Sbjct: 220 LRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQ 279
Query: 168 VHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H ++K G + L+ MY + I + VF K+++SW SMI G+ Q
Sbjct: 280 LHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGY 339
Query: 227 AQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
E L LF M R+GF + N+ GS+ +AC L G+ +HG K G+ N
Sbjct: 340 EIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGC 399
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+L DMY K G + A F ++ S DLVSW A+I ++ SG ++A+ F P
Sbjct: 400 SLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMP 459
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
+ +T S+L A +N G +HS I++GL+ + V N+L+ MY KC + DA +F
Sbjct: 460 DGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVF 519
Query: 405 ETTSEK-DVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
+ SE ++++WN+I+S L PD +T+ +++ CA L ++
Sbjct: 520 KDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASL 579
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+VG+ +H +S K GL+ +V V L++ YAKCG + AR VF + + + V+WS++I G
Sbjct: 580 EVGNQVHCFSVKSGLVV-DVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVG 638
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
Y G G +L LF M N VQPNEV + +LSACSH G+V EGW + +M + P
Sbjct: 639 YAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPP 698
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
+ +H CMVDLLARAG L EA F++ M PD++++ L C + D+ E + +
Sbjct: 699 TREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENI 758
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
L+L P + VL+SN++AS G W V ++R LMKQ G+ K PG S +
Sbjct: 759 LKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWI 806
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/629 (34%), Positives = 344/629 (54%), Gaps = 22/629 (3%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFLNDL 126
HA+ + G +D LV+MYG FG + AR VFD + + S+ ++ Y ND
Sbjct: 30 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQ 89
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
D ++ + M + F FS V+ AC R+ID G +VH +V++G D F
Sbjct: 90 CGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANA 149
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
LVDMY K + + +F++ D +VVSW ++I+G V N + L +M+ + N
Sbjct: 150 LVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPN 209
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
L S++ ACA A G+ +HG+++K + + ++ L+DMY K + DA VFD
Sbjct: 210 VFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFD 269
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ DL+ W A+I G + G D+A +F + N T+A+VL ++A L +
Sbjct: 270 WMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASA 329
Query: 366 GRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
R VH+L ++G + D V+N L+D Y KC ++DA +FE S D+IA S+I+ L
Sbjct: 330 TRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQ 389
Query: 425 -----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+ PD L S+++ACASL A + G +HA+ K+ +S + +
Sbjct: 390 CDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMS-DAF 448
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
G AL+ YAKCG + A + F ++ E+ V+WSAMIGG G G +L LF M++E
Sbjct: 449 AGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEG 508
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ PN + T++L AC+H G+V E + F SM F + +HY CM+DLL RAG+L++A
Sbjct: 509 INPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDA 568
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
+E + +MP + + S++GA L ++ +LG++ +K+ L P+K+ +VL++N YAS
Sbjct: 569 MELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASS 628
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
G W V +VR+LMK + K P S V++
Sbjct: 629 GMWNEVAKVRKLMKDSNIKKEPAMSWVEV 657
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 179/408 (43%), Gaps = 53/408 (12%)
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMIVGYT 323
G +H + G + + AL+ MY G + DAR VFDE S + VSW ++ Y
Sbjct: 26 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 85
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
++ A+++F + W+ P + V++A N++ GR VH++ +R+G E D
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVF 145
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
NALVDMY K + A IFE + DV++WN++ISG
Sbjct: 146 TANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSG 205
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ P+ L S++ ACA GA +G +H + K S+ Y+G L++ YAK A
Sbjct: 206 LVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKAN-ADSDDYIGVGLVDMYAKNHFLDDA 264
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH- 544
VFD M ++ + W+A+I G G + ++F + E + N +L + +
Sbjct: 265 MKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASL 324
Query: 545 -------------------------TGMVGEGWK--CFYSMCRDFKFVPS--MKHYVCMV 575
G++ WK C R F+ S + M+
Sbjct: 325 EAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMI 384
Query: 576 DLLARAGRLEEALE-FMENM--PIEPDVSLFGAFLHGCGLYSRFDLGE 620
L++ E A++ FME + +EPD + + L+ C S ++ G+
Sbjct: 385 TALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 432
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 212/646 (32%), Positives = 359/646 (55%), Gaps = 28/646 (4%)
Query: 55 LLGLCKSTGSLK---AFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
LL C+ L+ H + +G+ +N T L+ Y F ++ +FD M
Sbjct: 160 LLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFYLRFD-MRVLPLLFDLMVVR 218
Query: 110 DFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ S+ MI Y+ + D +K + F + + +K D ++AC EL + G ++
Sbjct: 219 NIVSWNAMISGYYDVGDYFKALELFVQMLVDEVK-FDCVTMLVAVQACAELGSLKLGKQI 277
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +K D ++L L++MY+ + SS Q+F+ +++ W SMI+ Y C
Sbjct: 278 HQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCH 337
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA-LHQGKWLHGYILKIGIEINSHLVTA 286
+E + LF RM+ V+ ++ T+ +++ C +L + L +GK LH +++K G+ I++ L A
Sbjct: 338 EEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNA 397
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
LL MY + + + +FD + +D++SW MI+ ++ +A +LF + ++ PN
Sbjct: 398 LLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPN 457
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
TI S+L+A + L+ GR +H ++ +E + + AL DMY C A AR +FE
Sbjct: 458 SYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFE 517
Query: 406 TTSEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLGAVQVG 449
++D+I+WN++I+ N P++VT+++V+S+ L + G
Sbjct: 518 GCPDRDLISWNAMIASYVKNNQAHKALLLFHRMISEAEPNSVTIINVLSSFTHLATLPQG 577
Query: 450 SSLHAYSTKQGL-LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
SLHAY T++G L ++ + A + YA+CG QSA +F + ++N ++W+AMI GYG
Sbjct: 578 QSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYG 637
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
M G G ++ FS ML + +PN V F ++LSACSH+G + G + F+SM +DF P +
Sbjct: 638 MNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPEL 697
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
HY C+VDLLAR G ++EA EF+++MPIEPD S++ A L C YS + + +K+ +
Sbjct: 698 VHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDK 757
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
L P A YVL+SN+YA+ G W+ V ++R +K++GL K PG S +
Sbjct: 758 LEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWI 803
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 211/419 (50%), Gaps = 23/419 (5%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVF 203
+N VLKAC ++ G +H I D V T +VD Y KC + +R VF
Sbjct: 52 NNTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVF 111
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D D++VV W +M+ GYV C +E ++L M + N T+ +L+ AC L
Sbjct: 112 DAMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELR 171
Query: 264 QGKWLHGYILKIGI-EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +HGY L+ G+ + N H+ TAL+ Y++ ++R +FD + ++VSW AMI GY
Sbjct: 172 LGRGVHGYCLRNGMFDSNPHVATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGY 230
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDY 381
G KAL+LF + + VT+ + A A+LG+L +G+ +H L I+ +ED
Sbjct: 231 YDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDL 290
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DD 424
++NAL++MY+ + + +FE+ +D WNS+IS +
Sbjct: 291 YILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSE 350
Query: 425 NVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V D T+V ++S C L + + G SLHA+ K G + + +G ALL+ Y + +
Sbjct: 351 GVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSG-MRIDASLGNALLSMYTELNCVE 409
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
S + +FD M+ + ++W+ MI + LF M E++PN +IL+AC
Sbjct: 410 SVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAAC 468
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 174/358 (48%), Gaps = 27/358 (7%)
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
K+ W S+I Q L + +M V N TL ++ ACA A+ +GK +
Sbjct: 16 KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 75
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H I + + + TA++D Y KCG + DAR VFD + D+V W AM+ GY G
Sbjct: 76 HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 135
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT--VINA 386
++A+ L + + PN T+ ++L A L +GR VH +R G+ D V A
Sbjct: 136 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATA 195
Query: 387 LVDMYAKCHVIADAR---YIFETTSEKDVIAWNSIISG-----------------LDDNV 426
L+ Y + D R +F+ +++++WN++ISG L D V
Sbjct: 196 LIGFYLRF----DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEV 251
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VT++ + ACA LG++++G +H + K + ++Y+ ALLN Y+ G +S+
Sbjct: 252 KFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFV-EDLYILNALLNMYSNNGSLESSH 310
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
+F+++ ++ W++MI Y G ++ LF M +E V+ +E +LS C
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEE 368
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/616 (33%), Positives = 349/616 (56%), Gaps = 22/616 (3%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDS--MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
CN L++MY G + AR +FDS M D S+ +I + + + ++ M++
Sbjct: 186 CNA-LIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQE 244
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGS 198
E + + F L+AC I G +H I+K D +V L+ MYA C +
Sbjct: 245 VGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMED 304
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+ +VF L K+ VSW ++++G VQND + + F M++ + +Q+++ +++ A +
Sbjct: 305 AERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGR 364
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L G +H Y +K GI+ N H+ +L+DMY KC ++ S F+ + DL+SWT +
Sbjct: 365 SANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTI 424
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I GY Q+ AL L + + + I S+L A + L + + + +H ++ GL
Sbjct: 425 IAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL 484
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII-----------------SG 421
D + NA+V++Y + ++ AR++FE+ + KD+++W S+I S
Sbjct: 485 ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSL 544
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
++ N+ PD +TLVSV+ A A+L +++ G +H + ++G + + +L++ YA+CG
Sbjct: 545 IETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGL-IANSLVDMYARCGT 603
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
++AR +F+ +++++ + W++MI GM G G ++ LFS M +E V P+ + F +L A
Sbjct: 604 MENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYA 663
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH+G+V EG + F M ++K P +HY C+VDLLAR+ LEEA F+ NMPIEP
Sbjct: 664 CSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAE 723
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ A L C ++S DLGEV KK+L+L+ + + YVLVSN +A+DGRW V +VR +MK
Sbjct: 724 VWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMK 783
Query: 662 QRGLSKSPGCSLVDLD 677
L K PGCS ++++
Sbjct: 784 GNKLKKKPGCSWIEVE 799
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 272/555 (49%), Gaps = 30/555 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+TK V MYG G A VFD M +++ MI Y + +E YK MR
Sbjct: 85 DTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGV 144
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D F F VLKAC ++ G ++H VK G G FV L+ MYAKC D+G +R
Sbjct: 145 SLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARV 204
Query: 202 VFDETL--DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
+FD L + VSW S+I+ +V + E L LF RM+E VE N T S + AC
Sbjct: 205 LFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGP 264
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ G+ +H ILK + ++ AL+ MY CG + DA VF + D VSW ++
Sbjct: 265 TFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLL 324
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
G Q+ A+ F D + + P+ V++ ++++AS + NL G VH+ I+ G++
Sbjct: 325 SGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGID 384
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
I N+L+DMY KC + FE EKD+I+W +II+G N
Sbjct: 385 SNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKV 444
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+ D + + S++ AC+ L + ++ +H Y K GL +++ + A++N Y +
Sbjct: 445 QLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGL--ADILIQNAIVNVYGELAL 502
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
AR VF+++ K+ V+W++MI G +L LF+ ++ ++P+ + ++L A
Sbjct: 503 VDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYA 562
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
+ + +G + + R F+ + +VD+ AR G +E A N + D+
Sbjct: 563 AAALSSLKKGKEIHGFLIRKGFFLEGLIAN-SLVDMYARCGTMENARNIF-NYVKQRDLI 620
Query: 602 LFGAF-----LHGCG 611
L+ + +HGCG
Sbjct: 621 LWTSMINANGMHGCG 635
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 23/417 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
+S+ L+ C + + +G ++H +K F+ T V MY KC + +VFD+
Sbjct: 49 YSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKM 108
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++ + +W +MI V E + L+ MR V + T ++ AC + G
Sbjct: 109 SERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGC 168
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE--LCSIDLVSWTAMIVGYTQ 324
+HG +K G + AL+ MY KCG++ AR +FD + D VSW ++I +
Sbjct: 169 EIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVG 228
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTV 383
G +AL LF + N T S L A + +GR +H++ ++ D V
Sbjct: 229 EGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYV 288
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
NAL+ MYA C + DA +F++ KD ++WN+++SG+ D
Sbjct: 289 SNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQ 348
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD V+++++I+A + G +HAY+ K G + SN+++G +L++ Y KC +
Sbjct: 349 KPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHG-IDSNMHIGNSLIDMYGKCCCVKYMG 407
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
F+ M EK+ ++W+ +I GY +L L + E++ + ++ +IL ACS
Sbjct: 408 SAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACS 464
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 214/469 (45%), Gaps = 44/469 (9%)
Query: 50 IPCLNLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDS 105
+ LN++ + +L A HA I G+ +N L+ MYG VKY S F+
Sbjct: 353 VSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEY 412
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP D S+ +I Y N+ + D + + ++ + D + +L AC L+
Sbjct: 413 MPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLI 472
Query: 166 MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H ++K G D + +V++Y + + +R VF+ K++VSWTSMI V N
Sbjct: 473 KEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNG 532
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A E L LFN + E +E + ITL S++ A A L +L +GK +HG++++ G + +
Sbjct: 533 LAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN 592
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+L+DMY +CG + +AR++F+ + DL+ WT+MI G A+ LF+ + P
Sbjct: 593 SLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLP 652
Query: 346 NHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADA 400
+H+T ++L A + G + G+ M + + E Y LVD+ A+ + + +A
Sbjct: 653 DHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYA---CLVDLLARSNSLEEA 709
Query: 401 RYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACA-----SLGAVQVGSSLHAY 455
+ + P A +++ AC LG V L
Sbjct: 710 YHFVRNMP-----------------IEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLN 752
Query: 456 STKQG--LLSSNVYVGTALLNFYAKCGDAQSARMVF--DAMREKNTVTW 500
+ G +L SN + N D + R + + +++K +W
Sbjct: 753 TENSGNYVLVSNTFAADGRWN------DVEEVRSIMKGNKLKKKPGCSW 795
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/589 (36%), Positives = 326/589 (55%), Gaps = 59/589 (10%)
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCR--DIG 197
L+EH + K+L C +R + +H I+K G ++ F L+ L++ A R DI
Sbjct: 27 LQEHPSL---KLLSKCQSIRTFKQ---IHAHIIKTGLHNTLFALSKLIEFSAVSRSGDIS 80
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+ +F+ + N+ W SMI G + LV F RM VE N T L+ +CA
Sbjct: 81 YAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCA 140
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG------------NIRDA----- 300
KL + H+GK +H ++LK+G + + T+L++MY + G N RDA
Sbjct: 141 KLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTA 200
Query: 301 --------------RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
R +FDE+ D+VSW AMI GY Q G +AL LF D + A+ PN
Sbjct: 201 LIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPN 260
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFE 405
TI SVLSA AQ L++G + S GL + ++NAL+DMY+KC + AR +F+
Sbjct: 261 ESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFD 320
Query: 406 TTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQV 448
E+DVI+WN +I G L V P +T +S++ +CA LGA+ +
Sbjct: 321 DMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDL 380
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +HAY K S + + T+L++ YAKCG+ +AR VFD M+ K+ +W+AMI G
Sbjct: 381 GKWIHAYINKN-FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLA 439
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
M G + LFS M ++ ++PNE+ F ILSAC H G+V G + F SM +D+K P
Sbjct: 440 MHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKS 499
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY CM+DLL RAG EEA ++NM ++PD +++G+ L C + R +LGE++ +++ E
Sbjct: 500 QHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFE 559
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
L PD YVL+SN+YA G+W V ++R + RG+ K PGC+ +++D
Sbjct: 560 LEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVD 608
Score = 229 bits (583), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 175/606 (28%), Positives = 285/606 (47%), Gaps = 91/606 (15%)
Query: 35 HELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLV--SMYG 91
H L + + L P L LL C+S + K HA +I GL N +KL+ S
Sbjct: 15 HVLPSSDPPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVS 74
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
G + YA S+F+S+ P+ + + MIR ++ + F+ M E +++ F
Sbjct: 75 RSGDISYAISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPF 134
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS------------ 198
+LK+C +L EG ++H ++K+G D F+ T L++MYA+ ++ +
Sbjct: 135 LLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRD 194
Query: 199 -------------------SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
+RQ+FDE K+VVSW +MIAGY Q ++E L+LF MR+
Sbjct: 195 AISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRK 254
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
V N+ T+ S+++ACA+ AL G + +I G+ N LV AL+DMY KCG+++
Sbjct: 255 ANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQT 314
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
AR +FD++ D++SW MI GYT +AL LF + + P +T S+L + A
Sbjct: 315 ARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAH 374
Query: 360 LGNLNMGRMVHS-LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
LG +++G+ +H+ + ++ +L+D+YAKC I AR +F+ K + +WN++
Sbjct: 375 LGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAM 434
Query: 419 ISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I GL D + P+ +T V ++SAC G V +G Q
Sbjct: 435 ICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLG---------QQF 485
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
SS MV D + + MI G G + +L
Sbjct: 486 FSS----------------------MVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQ 523
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLAR 580
+M EV+P+ I+ ++L AC G V G R F+ P + YV + ++ A
Sbjct: 524 NM---EVKPDGAIWGSLLGACRDHGRVELGELVAE---RLFELEPDNPGAYVLLSNIYAG 577
Query: 581 AGRLEE 586
AG+ ++
Sbjct: 578 AGKWDD 583
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 229/686 (33%), Positives = 347/686 (50%), Gaps = 70/686 (10%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD--FYSFQV 116
CK+ +K H L+ G+ + L+S Y S G + +A S+ P D Y +
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG 176
+IR Y N + + M DN+ F V KAC E+ + G H + +V
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHA-LSRVT 156
Query: 177 G--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
G + FV LV MY++C + +R+VFDE +VVSW S+I Y + + L +F
Sbjct: 157 GFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMF 216
Query: 235 NRMREGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
++M F + ITL +++ CA + GK HG+ + + N + L+DMY K
Sbjct: 217 SKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAK 276
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK----------WADF 343
G + +A +VF + D+VSW AM+ GY+Q G + A++LF + W+
Sbjct: 277 FGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAA 336
Query: 344 F-------------------------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
PN VT+ SVLS A +G L G+ +H I+ +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPM 396
Query: 379 E--------DYTVINALVDMYAKCHVIADARYIFETTS--EKDVIAWNSIISGL------ 422
+ + VIN L+DMYAKC + AR +F++ S E+DV+ W +I G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 423 -------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
D P+A T+ + ACASL A+ +G +HAY+ + + ++V
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQNAVPLFVS 516
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
L++ YAKCGD AR+VFD M EKN VTW++++ GYGM G G +L +F +M +
Sbjct: 517 NCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRIGFK 576
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
+ V +L ACSH+GM+ +G + F M DF P +HY C+VDLL RAGRL AL
Sbjct: 577 LDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALR 636
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
+E MP+EP ++ A L C ++ + +LGE KK+ EL + Y L+SN+YA+ GR
Sbjct: 637 LIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYANAGR 696
Query: 650 WIRVNQVRELMKQRGLSKSPGCSLVD 675
W V ++R LM+ +G+ K PGCS V+
Sbjct: 697 WKDVTRIRSLMRHKGIKKRPGCSWVE 722
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 150/311 (48%), Gaps = 23/311 (7%)
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID--LVSW 315
K + + Q K +H +L GI + +L + L+ Y+ G + A S+ D + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++I Y +G +K L F + P++ T V A ++ ++ G H+L
Sbjct: 96 NSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRV 155
Query: 376 LG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
G + + V NALV MY++C ++DAR +F+ DV++WNSII
Sbjct: 156 TGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEM 215
Query: 423 ------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ PD +TLV+V+ CAS+G +G H ++ ++ N++VG L++ Y
Sbjct: 216 FSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQ-NMFVGNCLVDMY 274
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AK G A VF M K+ V+W+AM+ GY G ++ LF M E+++ + V ++
Sbjct: 275 AKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWS 334
Query: 537 TILSACSHTGM 547
+S + G+
Sbjct: 335 AAISGYAQRGL 345
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 377 bits (969), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/642 (32%), Positives = 344/642 (53%), Gaps = 25/642 (3%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
LG+ + L H ++ G D T L+ Y G ++ AR VFD + ++
Sbjct: 50 LGVVEKGAQL---HGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTW 106
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
+I Y +E + MR+ D +V S VL AC L ++ G ++H +++
Sbjct: 107 TTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLR 166
Query: 175 VGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
G D V+ L+D Y KC + + R++FD+ + KN++SWT+MI+GY+QN E + L
Sbjct: 167 RGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKL 226
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
F M + + S++T+C L AL QG+ +H Y +K +E N + L+DMY K
Sbjct: 227 FGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAK 286
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
+ DA+ VFD + +++S+ AMI GY+ +AL+LF + + F P+ +T S+
Sbjct: 287 SNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSL 346
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDV 412
L SA L L + + +H L I+ G+ D +AL+D+Y+KC + DAR++FE +EKD+
Sbjct: 347 LGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDI 406
Query: 413 IAWNSIISGLDDNVS-----------------PDAVTLVSVISACASLGAVQVGSSLHAY 455
+ WN++ G ++ P+ T ++I+A ++L +++ G H
Sbjct: 407 VVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQ 466
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K GL +V AL++ YAKCG + AR +F++ ++ V W++MI + G+
Sbjct: 467 LVKMGL-DFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEE 525
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
+L +F +M+ E +QPN V F +LSACSH G V +G F SM F P +HY C+V
Sbjct: 526 ALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSM-PGFGIKPGTEHYACVV 584
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
LL R+G+L EA EF+E MPIEP ++ + L C + +LG+ + + P +
Sbjct: 585 SLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSG 644
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
Y+L+SN++AS G W V +VR+ M + K PG S ++++
Sbjct: 645 SYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVN 686
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 292/528 (55%), Gaps = 27/528 (5%)
Query: 137 MRKRLKEHDN-FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCR 194
++++ EH N FV + V++AC +L +++G ++H +V+ G D +V T L+D Y+K
Sbjct: 27 LQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNG 86
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
BI +R VFD+ L+K V+WT++IAGY + + L LF +MRE V ++ + S+++
Sbjct: 87 BIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLS 146
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
AC+ L L GK +H Y+L+ G E++ +V L+D Y KC ++ R +FD++ +++S
Sbjct: 147 ACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIIS 206
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
WT MI GY Q+ + +A+KLF + + P+ SVL++ L L GR VH+ I
Sbjct: 207 WTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTI 266
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------- 425
+ LE + V N L+DMYAK +++ DA+ +F+ +E++VI++N++I G
Sbjct: 267 KANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALE 326
Query: 426 ---------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
P +T VS++ ASL A+++ +H K G +S +++ G+AL++ Y
Sbjct: 327 LFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXG-VSLDLFAGSALIDVY 385
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+KC + AR VF+ M EK+ V W+AM GY + +L L+S + +PNE F
Sbjct: 386 SKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFA 445
Query: 537 TILSACSHTGMVGEGWKCFYSMCR-DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+++A S+ + G + + + F P + + +VD+ A+ G +EEA + M N
Sbjct: 446 ALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARK-MFNSS 502
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
I DV + + + + + M ++M++ + P+ + ++S
Sbjct: 503 IWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLS 550
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/332 (33%), Positives = 183/332 (55%), Gaps = 20/332 (6%)
Query: 227 AQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
++E L++F + R+ N+ L S++ AC +L + +G LHG++++ G + + ++ T
Sbjct: 17 SEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGT 76
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+L+D Y K GBI AR VFD+L V+WT +I GYT+ G +L+LF + + P
Sbjct: 77 SLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVP 136
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
+ ++SVLSA + L L G+ +H+ +R G E D +V+N L+D Y KC+ + R +F
Sbjct: 137 DRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLF 196
Query: 405 ETTSEKDVIAWNSIISGLDDNV-----------------SPDAVTLVSVISACASLGAVQ 447
+ K++I+W ++ISG N PD SV+++C SL A++
Sbjct: 197 DQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALE 256
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +HAY+ K L SN +V L++ YAK A+ VFD M E+N ++++AMI GY
Sbjct: 257 QGRQVHAYTIKAN-LESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGY 315
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
Q +L LF +M P+ + F ++L
Sbjct: 316 SSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 347
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 211/456 (46%), Gaps = 31/456 (6%)
Query: 52 CLNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
C ++L C S +L + HA I L +N+ L+ MY + A+ VFD M
Sbjct: 242 CTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMA 301
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ S+ MI Y + + +E + MR RL F +L L ++ +
Sbjct: 302 EQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQ 361
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I+K G D F + L+D+Y+KC + +R VF+E +K++V W +M GY Q+
Sbjct: 362 IHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLE 421
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+E L L++ ++ + N+ T +L+TA + L +L G+ H ++K+G++ + A
Sbjct: 422 NEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNA 481
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+DMY KCG+I +AR +F+ D+V W +MI + Q G ++AL +F + PN
Sbjct: 482 LVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPN 541
Query: 347 HVTIASVLSASAQLG----NLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARY 402
+VT +VLSA + G LN + GI+ G E Y + +L+ K + +A+
Sbjct: 542 YVTFVAVLSACSHAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGK---LFEAKE 598
Query: 403 IFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
E + P A+ S++SAC G V++G +
Sbjct: 599 FIEKMP-----------------IEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPK 641
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
S Y+ L N +A G + V D M V
Sbjct: 642 DSGSYI--LLSNIFASKGMWADVKKVRDRMDSSEVV 675
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/611 (34%), Positives = 347/611 (56%), Gaps = 29/611 (4%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
F + R VFD+M + ++ MI WY + + + ++ M + F V
Sbjct: 165 FNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNV 224
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
A + D D ++ +VK+G D FV++ + MYA+ + +R++FD L++
Sbjct: 225 FPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLER 284
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREG--FVEGNQITLGSLVTACAKLRALHQGKW 267
N W +MI GYVQN+C E + LF ++ E FV + +T S +TA ++L+ L G+
Sbjct: 285 NTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVL-DDVTFLSALTAISQLQWLELGRQ 343
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
LH YILK + ++ A++ MY +CG+I + VF + D+V+W M+ + Q+G
Sbjct: 344 LHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGL 403
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINAL 387
D+ L L + F + VT+ ++LS ++ L + +G+ H+ IR G++ + + L
Sbjct: 404 DDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDSYL 463
Query: 388 VDMYAKCHVIADARYIFETTSE--KDVIAWNSIISG-----------------LDDNVSP 428
+DMYAK +I A+ +FE S+ +D WN++I+G ++ NV P
Sbjct: 464 IDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
+AVTL S++ AC +G + +G +H ++ + L+ NV+VGTALL+ Y+K G A V
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQIHGFAIR-CFLNRNVFVGTALLDMYSKSGAITYAENV 582
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F EKN+VT++ MI YG G G +L+LF ML ++P+ V F ILSACS+ G+V
Sbjct: 583 FAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLV 642
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV-SLFGAFL 607
EG + F SM R++K PS +HY C+ D+L R GR+ EA EF++ + E + ++G+ L
Sbjct: 643 DEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLL 702
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKAC--YYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
C ++ F+LG+V+ K+LE+ + Y+VL+SN+YA++G W V++VR+ M+Q+GL
Sbjct: 703 GACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGL 762
Query: 666 SKSPGCSLVDL 676
K GCS V++
Sbjct: 763 MKEAGCSWVEV 773
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 178/674 (26%), Positives = 308/674 (45%), Gaps = 84/674 (12%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKV 152
GH A +FDS+P P + +I + N++ D + FY MR + D++ FS
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD----IGSS-------- 199
LKAC + R + G +HC +++ G V L++MY+ C +G++
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 200 -RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
R+VFD +NVV+W +MI+ YV+ + E +F M + ++ ++ A +
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230
Query: 259 LRALHQGKWLHGYILKIGIEI--NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ L+G ++K+G + + +V++ + MY + G + AR +FD + W
Sbjct: 231 MSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWN 290
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI GY Q+ P +A+ LF ++ F + VT S L+A +QL L +GR +H+ ++
Sbjct: 291 TMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILK 350
Query: 376 LG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDN---- 425
+ ++NA++ MY++C I + +F E+DV+ WN+++S GLDD
Sbjct: 351 SSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLML 410
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
D+VTL +++S ++L + ++G HAY + G+ + + L++ YA
Sbjct: 411 VFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG--MDSYLIDMYA 468
Query: 478 KCGDAQSARMVFDAMR--EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
K G +A+ +F+ +++ TW+AMI GY G A+F M+ + V+PN V
Sbjct: 469 KSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTL 528
Query: 536 TTILSACSHTGMVGEG-------WKCF--------------YSMCRDFKFVPSM------ 568
+IL AC+ G +G G +CF YS + ++
Sbjct: 529 ASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLE 588
Query: 569 ---KHYVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
Y M+ + G E AL M I+PD F A L C D G +
Sbjct: 589 KNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI 648
Query: 623 IKKM---LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP----GCSLVD 675
+ M ++ P A +Y V+++ GR RV + E +K G + G L
Sbjct: 649 FQSMEREYKIQPS-AEHYCCVADML---GRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGA 704
Query: 676 LDIANDFSFSRVVS 689
I +F +VV+
Sbjct: 705 CRIHGEFELGKVVA 718
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 202/386 (52%), Gaps = 25/386 (6%)
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHD 145
+ MY G V +AR +FD + + MI Y N+ + ++ F + M D
Sbjct: 262 IFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLD 321
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ F L A +L+ ++ G ++H I+K +L ++ MY++C IG+S +VF
Sbjct: 322 DVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFS 381
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVL-FNRMREGFVEGNQITLGSLVTACAKLRALH 263
L+++VV+W +M++ +VQN EGL+L F ++GF+ + +TL +L++ + LR+
Sbjct: 382 NMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMV-DSVTLTALLSLASNLRSQE 440
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL--VSWTAMIVG 321
GK H Y+++ GI+ + + L+DMY K G I A+ +F++ D +W AMI G
Sbjct: 441 IGKQAHAYLIRHGIQFEG-MDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAG 499
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-ED 380
YTQ+G ++ +F + PN VT+AS+L A +G + +G+ +H IR L +
Sbjct: 500 YTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRN 559
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
V AL+DMY+K I A +F T EK+ + + ++IS L
Sbjct: 560 VFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLG 619
Query: 424 DNVSPDAVTLVSVISACASLGAVQVG 449
+ PD+VT V+++SAC+ G V G
Sbjct: 620 SGIKPDSVTFVAILSACSYAGLVDEG 645
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 105/203 (51%), Gaps = 3/203 (1%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFD--SMPNPDFYSFQVMIRWYFL 123
K HA LI G+ + ++ L+ MY G + A+ +F+ S + D ++ MI Y
Sbjct: 443 KQAHAYLIRHGIQFEGMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQ 502
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
N L ++ ++ M ++ + + +L AC + I G ++H ++ + FV
Sbjct: 503 NGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFV 562
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+DMY+K I + VF ETL+KN V++T+MI+ Y Q+ + L LF+ M +
Sbjct: 563 GTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGI 622
Query: 243 EGNQITLGSLVTACAKLRALHQG 265
+ + +T ++++AC+ + +G
Sbjct: 623 KPDSVTFVAILSACSYAGLVDEG 645
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 33 TQHEL-DQTFASFHSL-------PSIPCLNLLGLCKSTGSL---KAFHALLIVDGLT-ND 80
TQ+ L ++ FA F + ++ ++L C G++ K H I L N
Sbjct: 501 TQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNV 560
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
T L+ MY G + YA +VF + ++ MI Y + + + + + M
Sbjct: 561 FVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGS 620
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ D+ F +L AC +DEG+++
Sbjct: 621 GIKPDSVTFVAILSACSYAGLVDEGLRI 648
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/632 (33%), Positives = 335/632 (53%), Gaps = 23/632 (3%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ H ++ GL+++ CN LV++Y +G++ A +F M D S+ +I
Sbjct: 233 EQLHGFIVKWGLSSETFVCNA-LVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQ 291
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL 183
++ ++ M+ + D + +L AC + +G ++H ++K+G ++
Sbjct: 292 RGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLII 351
Query: 184 TG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
G L+D+Y KC DI ++ + F T +NVV W M+ Y Q E +F +M+ +
Sbjct: 352 EGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGL 411
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
NQ T S++ C L AL G+ +H ++K G + N ++ + L+DMY K G + AR
Sbjct: 412 MPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARG 471
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+ L D+VSWTAMI GYTQ +ALKLF + + +++ +S +SA A +
Sbjct: 472 ILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQA 531
Query: 363 LNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
LN G+ +H+ G ED ++ NALV +YA+C DA FE KD I+WN++ISG
Sbjct: 532 LNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISG 591
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ V + T S +SA A+ ++ G +HA K G S
Sbjct: 592 FAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGY-DS 650
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
L+ Y+KCG + A+ F M EKN V+W+AMI GY G G +++LF +M
Sbjct: 651 ETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMK 710
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ PN V F +LSACSH G+V EG F SM ++ VP +HYVC+VDLL RA L
Sbjct: 711 QLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALL 770
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
A EF+E MPIEPD ++ L C ++ ++GE + +LEL P+ + YVL+SN+Y
Sbjct: 771 CCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMY 830
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
A G+W ++ R++MK RG+ K PG S +++
Sbjct: 831 AVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEV 862
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/567 (28%), Positives = 287/567 (50%), Gaps = 26/567 (4%)
Query: 59 CKSTGSL---KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C ++GSL K HA + G D ++L+ +Y + G V A +FD +P+ + +
Sbjct: 20 CFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFW 79
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR-DIDEGMKVHCEIV 173
+I L ++ + M D F+ VL+AC + ++H +I+
Sbjct: 80 NKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKII 139
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
G G V L+D+Y+K + ++ VF+ K+ VSW +MI+G QN E ++
Sbjct: 140 HHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAIL 199
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
LF +M + V S+++AC K+ G+ LHG+I+K G+ + + AL+ +Y
Sbjct: 200 LFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYS 259
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
+ GN+ A +F ++ D +S+ ++I G Q G+ D+AL+LF + P+ VT+AS
Sbjct: 260 RWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVAS 319
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+LSA A +G G+ +HS I++G+ D + +L+D+Y KC I A F TT ++
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379
Query: 412 VIAWNSIIS--GLDDNVS---------------PDAVTLVSVISACASLGAVQVGSSLHA 454
V+ WN ++ G N+S P+ T S++ C SLGA+ +G +H
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHT 439
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
K G NVYV + L++ YAK G+ +AR + +RE++ V+W+AMI GY
Sbjct: 440 QVIKSG-FQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFA 498
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
+L LF +M N+ ++ + + F++ +SAC+ + +G + ++ + + +
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQ-IHAQSYISGYSEDLSIGNAL 557
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVS 601
V L AR GR ++A E + + ++S
Sbjct: 558 VSLYARCGRAQDAYLAFEKIDAKDNIS 584
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 23/336 (6%)
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M E + N T L C +L K LH I K G + L + L+D+Y+ G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ +A +FD++ S ++ W +I G + L LF+ + P+ T ASVL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 357 -SAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIA 414
S + +H+ I G ++ N L+D+Y+K + A+ +FE KD ++
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 415 WNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
W ++ISGL N V P SV+SAC + ++G LH +
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K G LSS +V AL+ Y++ G+ +A +F M ++ ++++++I G +G +L
Sbjct: 241 KWG-LSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
LF M + ++P+ V ++LSAC+ VG G+K
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACAS---VGAGYK 332
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 332/594 (55%), Gaps = 24/594 (4%)
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M Y + +++ + ++ ++ + M + ++ DNF LKAC ELR++ G
Sbjct: 1 MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60
Query: 166 MKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H + K G D +V + L+ MY KC + + ++F+E ++V+W+SM++G+ +
Sbjct: 61 EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120
Query: 224 NDCAQEGLVLFNRMREGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
N + + F RM V +++TL +LV+AC KL G+ +HG++++ G +
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
LV +LL+ Y K ++A ++F + D++SW+ +I Y Q+G +AL++F +
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
PN T+ VL A A +L GR H L IR GLE + V ALVDMY KC +A
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAY 300
Query: 402 YIFETTSEKDVIAWNSIISG------------------LDDNVSPDAVTLVSVISACASL 443
+F +KDV++W ++ISG L++N PDA+ ++ V+ +C+ L
Sbjct: 301 AVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSEL 360
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G ++ H+Y K G SN ++G +L+ Y++CG +A VF+ + K+TV W+++
Sbjct: 361 GFLKQAECFHSYVIKYGF-DSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSL 419
Query: 504 IGGYGMQGDGGGSLALFSDML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
I GYG+ G G +L F+ M+ + EV+PNEV F +ILSACSH G++ EG + F M D+
Sbjct: 420 ITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDY 479
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
+ P+++HY +VDLL R G L+ A+E + MP P + G L C ++ ++ E +
Sbjct: 480 RLAPNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETV 539
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
K++ EL + A YY+L+SN+Y G W V ++R +KQRG+ K SL+++
Sbjct: 540 AKQLFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEI 593
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 207/424 (48%), Gaps = 22/424 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK- 142
+ L+ MY G + A +F+ + PD ++ M+ + N VEF++ M
Sbjct: 81 SSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMATASDV 140
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D ++ AC +L + G VH +++ G D ++ L++ YAK R +
Sbjct: 141 TPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 200
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F +K+V+SW+++IA YVQN A E L +FN M + E N T+ ++ ACA
Sbjct: 201 LFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEPNVATVLCVLQACAAAND 260
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L QG+ H ++ G+E + TAL+DMY+KC + +A +VF + D+VSW A+I G
Sbjct: 261 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPKKDVVSWVALISG 320
Query: 322 YTQSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
+T +G ++++ F+ + P+ + + VL + ++LG L HS I+ G +
Sbjct: 321 FTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAECFHSYVIKYGFDS 380
Query: 381 YTVINA-LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------- 422
I A LV++Y++C + +A +F + KD + W S+I+G
Sbjct: 381 NPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 440
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
V P+ VT +S++SAC+ G + G + L+ N+ L++ + G+
Sbjct: 441 RSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAPNLEHYAVLVDLLGRVGE 500
Query: 482 AQSA 485
+A
Sbjct: 501 LDTA 504
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 7/220 (3%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
L +L C + L + H L I GL T K +T LV MY + A +VF +P
Sbjct: 249 LCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPK 308
Query: 109 PDFYSFQVMIRWYFLNDL-YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
D S+ +I + LN + ++ I EF + + D + KVL +C EL + +
Sbjct: 309 KDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFLKQAEC 368
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
H ++K G + F+ LV++Y++C +G++ +VF+E K+ V WTS+I GY +
Sbjct: 369 FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGYGIHGK 428
Query: 227 AQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQG 265
+ L FN M R V+ N++T S+++AC+ +H+G
Sbjct: 429 GTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEG 468
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 337/617 (54%), Gaps = 27/617 (4%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK----CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
+S K H I GL + + L Y G V AR +FD + +P + +
Sbjct: 93 RSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWN 152
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
+I+ Y + D + + M K D + F V+KAC + ++ G+ +H +
Sbjct: 153 AIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALV 212
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
G + FV L+ MY C +G +RQVF+ L ++VVSW +MI+G+ QN +E L +
Sbjct: 213 SGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAV 272
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
FN M + VE + T+ S + +C L+ L G +H + K ++ + AL+DMY +
Sbjct: 273 FNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSR 332
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CG + +A VF E D+++WT+MI GY +G AL L + PN VT+AS+
Sbjct: 333 CGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASL 392
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDV 412
LSA A L L G+ +H+ +R L+ D V+ AL+DMYAKC+ ++ + +F TS K
Sbjct: 393 LSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRT 452
Query: 413 IAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+ WN+++SGL N V + T SVI A A L ++ +LH+Y
Sbjct: 453 VPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSY 512
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM--REKNTVTWSAMIGGYGMQGDG 513
+ G +S + V T L++ Y+KCG A +FD + +EK+ + WS +I GYGM G G
Sbjct: 513 LVRSGFIS-KIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHG 571
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
++ LF+ M++ +QPNE+ FT++L ACSH G+V +G F M ++ P HY C
Sbjct: 572 ETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTC 631
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
+VDLL RAGRL+EA + +++MP + + S++GA L C ++ +LGEV +++ EL P+
Sbjct: 632 VVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPES 691
Query: 634 ACYYVLVSNLYASDGRW 650
Y+L++N+YA+ GRW
Sbjct: 692 TGNYILLANIYAAVGRW 708
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 347/634 (54%), Gaps = 27/634 (4%)
Query: 68 FHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LND 125
+ L+ G D T L+ Y G++ YAR VFD++P ++ MI +
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLT 184
Y + FY+ M + D ++ S VL AC L ++ G ++H I++ G D+ ++
Sbjct: 230 SYVSLQLFYQLMEDNVVP-DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+D Y KC + ++ ++F+ +KN++SWT++++GY QN +E + LF M + ++
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ S++T+CA L AL G +H Y +K + +S++ +L+DMY KC + DAR VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 305 DELCSIDLVSWTAMIVGYTQSGYP---DKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
D + D+V + AMI GY++ G +AL +F D ++ P+ +T S+L ASA L
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L + + +H L + GL D +AL+D+Y+ C+ + D+R +F+ KD++ WNS+ +
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 421 G--------------LDDNVS---PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G L+ +S PD T ++++A +L +VQ+G H K+GL
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL-E 587
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
N Y+ ALL+ YAKCG + A FD+ ++ V W+++I Y G+G +L + M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
++E ++PN + F +LSACSH G+V +G K F M R F P +HYVCMV LL RAGR
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGR 706
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L +A E +E MP +P ++ + L GC +L E + + P + + ++SN+
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNI 766
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YAS G W +VRE MK G+ K PG S + ++
Sbjct: 767 YASKGMWTEAKKVRERMKVEGVVKEPGRSWIGIN 800
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 190/656 (28%), Positives = 328/656 (50%), Gaps = 68/656 (10%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H +IV GL D + L+++Y G + YAR VF+ MP + S+ M+ + +Y
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 128 KD-IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM--KVHCEIVKVG-GPDSFVL 183
++ +V F + R R + ++ S ++AC L M ++ +VK G D +V
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVG 186
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L+D Y K +I +R VFD +K+ V+WT+MI+G V+ + L LF ++ E V
Sbjct: 187 TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ L ++++AC+ L L GK +H +IL+ G+E+++ L+ L+D YVKCG + A +
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+ + + +++SWT ++ GY Q+ +A++LFT P+ +S+L++ A L L
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHAL 366
Query: 364 NMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
G VH+ I+ L D V N+L+DMYAKC + DAR +F+ + DV+ +N++I G
Sbjct: 367 GFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 426
Query: 423 D--------------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+ P +T VS++ A ASL ++ + +H K G L
Sbjct: 427 SRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG-L 485
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ +++ G+AL++ Y+ C + +R+VFD M+ K+ V W++M GY Q + +L LF +
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 523 MLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWKC----------FYSMC-- 559
+ +P+E F +++A H ++ G +C Y+ C
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 560 -----RDFKFVPSMKHYVC---MVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLH 608
+ F S + VC ++ A G ++AL+ +E M IEP+ F L
Sbjct: 606 PEDAHKAFDSAAS-RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 609 GCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
C + G + ML + P+ Y +VS L GR R+N+ REL+++
Sbjct: 665 ACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLL----GRAGRLNKARELIEK 716
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 213/475 (44%), Gaps = 33/475 (6%)
Query: 36 ELDQTFASFHSLPSI-PCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTK-LVSMY 90
EL + + F P + C ++L C S +L HA I L ND T L+ MY
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMY 395
Query: 91 GSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYK--DIVEFYKCMRKRLKEHDNF 147
+ AR VFD D F MI Y L ++ + + ++ MR RL
Sbjct: 396 AKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLL 455
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F +L+A L + ++H + K G D F + L+D+Y+ C + SR VFDE
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
K++V W SM AGYVQ +E L LF ++ ++ T ++VTA L ++ G+
Sbjct: 516 KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQ 575
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
H +LK G+E N ++ ALLDMY KCG+ DA FD S D+V W ++I Y G
Sbjct: 576 EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHG 635
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV-IN 385
KAL++ PN++T VLSA + G + G L +R G+E T
Sbjct: 636 EGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYV 695
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGA 445
+V + + + AR + E K P A+ S++S CA G
Sbjct: 696 CMVSLLGRAGRLNKARELIEKMPTK-----------------PAAIVWRSLLSGCAKAGN 738
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVG--TALLNFYAKCGDAQSARMVFDAMREKNTV 498
V+ L ++ + +LS G T L N YA G A+ V + M+ + V
Sbjct: 739 VE----LAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 188/387 (48%), Gaps = 37/387 (9%)
Query: 258 KLRA----LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
+LRA LH +HG I+ G+E++++L L+++Y + G + AR VF+++ +LV
Sbjct: 52 QLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLV 111
Query: 314 SWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLN--MGRMV 369
SW+ M+ G +++L +F + + D PN ++S + A + L M +
Sbjct: 112 SWSTMVSACNHHGIYEESLVVFLEFWRTRKD-SPNEYILSSFIQACSGLDGRGRWMVFQL 170
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------- 421
S ++ G + D V L+D Y K I AR +F+ EK + W ++ISG
Sbjct: 171 QSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRS 230
Query: 422 ----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
++DNV PD L +V+SAC+ L ++ G +HA+ + G L + +
Sbjct: 231 YVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG-LEMDASLMNV 289
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ Y KCG +A +F+ M KN ++W+ ++ GY ++ LF+ M ++P+
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALE 589
++IL++C+ +G G + K YV ++D+ A+ L +A +
Sbjct: 350 MYACSSILTSCASLHALGFGTQVH---AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRF 616
+ + DV LF A + G YSR
Sbjct: 407 VFD-IFAAADVVLFNAMIEG---YSRL 429
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/625 (35%), Positives = 350/625 (56%), Gaps = 69/625 (11%)
Query: 119 RWYFLNDLYKDIVEFYKCMRK--------------RLKEH----DNFVFSKVLKACCELR 160
RWY + +KD + + K R++ H +NF F +LKAC LR
Sbjct: 7 RWYHCSISHKDTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALR 66
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK--NVVSWTSM 217
+ ++VH + ++G D F LVD Y KC + QVFDE + +VVSWT++
Sbjct: 67 RLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTAL 126
Query: 218 IAGYVQNDCAQEGLVLFNRMR--EGFVEGNQ------ITLGSLVTACA---KLRALHQGK 266
I+ Y N C E F RMR G+ +G++ ++LG+LV+ACA L +G
Sbjct: 127 ISAYSSNGCVDEAFKAFGRMRWMRGW-DGSECCGVDVVSLGALVSACAVGCGSNCLRRGS 185
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD--ELCSIDLVSWTAMIVGYTQ 324
+HG ++K G +++HL +++ MY C ++ A VF+ + D+VSW ++I G+T
Sbjct: 186 AVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTL 245
Query: 325 SGYPDKALKLFTD---KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIR----L 376
+G ++AL+ F D + + PN VT+ ++L + A+LG + VH + R L
Sbjct: 246 NGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLL 305
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD------------ 424
+D V+ AL+DM+A+C +A AR IF+ K+V+ W+++I+G +
Sbjct: 306 VAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFR 365
Query: 425 -----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
V P+AVTLVSVI+AC+ LGA + S +H Y+ GL + + +AL+
Sbjct: 366 QMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGL-DQDARIASALI 424
Query: 474 NFYAKCGDAQSARMVFDAMRE--KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
+ AKCGD + R VF M E + V+WS+MIG G+ G+G +L LFS+M +PN
Sbjct: 425 DMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPN 484
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
E+ + ++LSACSH G+V +G CF SM +D+ P+ KHY C+VDLL RAG L+EA +
Sbjct: 485 EITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVI 544
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
NMPI+ D++L+G+ L C L+ LGE++ KK+L L + ++VL++N+Y GRW
Sbjct: 545 LNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWD 604
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDL 676
V ++R +++ GL K PG S +++
Sbjct: 605 DVVRMRVELRRSGLRKIPGQSFIEI 629
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 254/555 (45%), Gaps = 72/555 (12%)
Query: 14 TKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAF----- 68
T+ P+ L FF T Q H++PS L K+ +L+
Sbjct: 30 TQNPQTALTFF--TRMQA-------------HAVPSNN-FTFPALLKACAALRRLLPTLQ 73
Query: 69 -HALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMP--NPDFYSFQVMIRWYFLN 124
HA L GL D+ + LV YG GH YA VFD MP + D S+ +I Y N
Sbjct: 74 VHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSN 133
Query: 125 DLYKDIVEFYKCMR-------KRLKEHDNFVFSKVLKAC---CELRDIDEGMKVHCEIVK 174
+ + + MR D ++ AC C + G VH +VK
Sbjct: 134 GCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVK 193
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQEGL 231
G G + + +V MY+ C+D+G + +VF+ ++VVSW S+I+G+ N A+ L
Sbjct: 194 YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERAL 253
Query: 232 VLFNRM-REGF--VEGNQITLGSLVTACAKLRALHQGKWLHGYI----LKIGIEINSHLV 284
F M EG VE N++T+ +L+ +CA+L + W+H YI + + + ++
Sbjct: 254 RTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVL 313
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT------DK 338
TALLDM+ +CGN+ AR +FD + ++V W+AMI GY Q P++AL+LF +
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVI 397
+ PN VT+ SV++A ++LG M+H + GL +D + +AL+DM AKC I
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433
Query: 398 ADARYIFETTSE--KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVIS 438
R +F E + V++W+S+I P+ +T +SV+S
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NT 497
AC+ G V+ G S K +S L++ + G A V M K +
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553
Query: 498 VTWSAMIGGYGMQGD 512
W +++ + G+
Sbjct: 554 ALWGSLLAACHLHGN 568
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/618 (35%), Positives = 347/618 (56%), Gaps = 45/618 (7%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKR 140
CN VS + S K FD + N D Y++ +MI Y +++ F M
Sbjct: 21 CNQPNVSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSS 80
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSS 199
D F VLKAC R + +G K+HC +K G D +V L+ +Y++ + +G++
Sbjct: 81 GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 137
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R +FDE +++ SW +MI+GY Q+ A+E L L N +R + +T+ SL++AC +
Sbjct: 138 RILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEA 193
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
++G +H Y +K G+E S L +RD + VFD + DL+SW ++I
Sbjct: 194 GDFNRGVTIHSYSIKHGLE--SEL-------------LRDCQKVFDRMYVRDLISWNSII 238
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-- 377
Y + P +A+ LF + + + P+ +T+ S+ S +QLG++ R V +R G
Sbjct: 239 KAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWF 298
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
LED T+ NA+V MYAK ++ AR +F DVI+WN+IISG N
Sbjct: 299 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 358
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
++ + T VSV+ AC+ GA++ G LH K GL +V+V T+L + Y KC
Sbjct: 359 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL-DVFVVTSLADMYGKC 417
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G + A +F + N+V W+ +I +G G G ++ LF +ML+E V+P+ + F T+L
Sbjct: 418 GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 477
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACSH+G+V EG CF M D+ PS+KHY CMVD+ RAG+LE AL+F+++M ++PD
Sbjct: 478 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPD 537
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
S++GA L C ++ DLG++ + + E+ P+ Y+VL+SN+YAS G+W V+++R +
Sbjct: 538 ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSI 597
Query: 660 MKQRGLSKSPGCSLVDLD 677
+GL K+PG S +++D
Sbjct: 598 AHGKGLRKTPGWSSMEVD 615
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/612 (34%), Positives = 329/612 (53%), Gaps = 22/612 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++MYG +K A+ VFD+MP + S+ +I Y N + +EFY M + D
Sbjct: 104 ILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPD 163
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F F ++KAC L DI G ++H ++K G L+ MY K I + VF
Sbjct: 164 QFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFS 223
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALH 263
++++SW SMIAG+ Q E L F M +G N+ GS+ +AC+ L
Sbjct: 224 RMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE 283
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ LHG +K G+ + +L DMY KCG + AR VF ++ DLV+W A+I G+
Sbjct: 284 YGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFA 343
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
G +A+ F+ + P+ +T+ S+L A L G VH ++GL+ D
Sbjct: 344 YGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVP 403
Query: 383 VINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSIISGL--DDNVS------------ 427
V N L+ MYAKC + DA + FE D+++WN+I++ D
Sbjct: 404 VCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCIS 463
Query: 428 ---PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
PD +TL +V+ A A ++++G+ +H Y+ K GL + + V L++ YAKCG ++
Sbjct: 464 QHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGL-NCDTSVTNGLIDLYAKCGSLKT 522
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A +FD+M + V+WS++I GY G G +L LF M +V+PN V F +L+ACSH
Sbjct: 523 AHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSH 582
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G+V EGWK + +M ++F P+ +H CMVDLLARAG L EA F+ M +PD+ ++
Sbjct: 583 VGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWK 642
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
L C + D+G+ + +L++ P + +VL+ N+YAS G W V ++R LMKQRG
Sbjct: 643 TLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRG 702
Query: 665 LSKSPGCSLVDL 676
+ K PG S +++
Sbjct: 703 VRKVPGQSWIEV 714
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 159/519 (30%), Positives = 262/519 (50%), Gaps = 40/519 (7%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
++ ++ AC LR ++ G K+H ++K PD + +++MY KC+ + +++VFD
Sbjct: 65 TYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM 124
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++NVVSWTS+IAGY QN L + +M + V +Q T GS++ AC+ L + G+
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184
Query: 267 WLHGYILKIGIEINSHLV--TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
LH ++LK E +H++ AL+ MY K I DA VF + + DL+SW +MI G++Q
Sbjct: 185 QLHAHVLK--SEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQ 242
Query: 325 SGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYT 382
GY +AL F + + PN SV SA + L GR +H + I+ GL D
Sbjct: 243 LGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVF 302
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
+L DMYAKC +++ AR +F D++AWN+II+G
Sbjct: 303 AGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQG 362
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD +T+ S++ AC S + G +H Y K G L +V V LL YAKC + + A
Sbjct: 363 LIPDEITVRSLLCACTSPSELYQGMQVHGYINKMG-LDLDVPVCNTLLTMYAKCSELRDA 421
Query: 486 RMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
F+ MR + V+W+A++ L M + +P+ + T +L A +
Sbjct: 422 IFFFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAE 481
Query: 545 TGM--VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
T +G C Y++ S+ + ++DL A+ G L+ A + ++M I PDV
Sbjct: 482 TVSIEIGNQVHC-YALKTGLNCDTSVTN--GLIDLYAKCGSLKTAHKIFDSM-INPDVVS 537
Query: 603 FGAFLHGCGLYSRFDLGEVMIK-----KMLELHPDKACY 636
+ + + G Y++F GE +K + L++ P+ +
Sbjct: 538 WSSLILG---YAQFGYGEEALKLFKTMRRLDVKPNHVTF 573
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 244/485 (50%), Gaps = 55/485 (11%)
Query: 221 YVQNDCAQEGLVLFNRMREGF-----VEGNQITLGS---LVTACAKLRALHQGKWLHGYI 272
Y+ + C Q+ LFN + F G +TL + L++AC+ LR+L GK +H ++
Sbjct: 33 YITSLCKQK---LFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHM 89
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
LK + L +L+MY KC +++DA+ VFD + ++VSWT++I GY+Q+G AL
Sbjct: 90 LKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNAL 149
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMY 391
+ + + P+ T S++ A + LG++ +GR +H+ ++ + + NAL+ MY
Sbjct: 150 EFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMY 209
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVS-PDAVTL 433
K ++I DA +F + +D+I+W S+I+G L V P+
Sbjct: 210 TKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIF 269
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
SV SAC+SL + G LH S K G L +V+ G +L + YAKCG AR+VF +
Sbjct: 270 GSVFSACSSLLQPEYGRQLHGMSIKFG-LGRDVFAGCSLCDMYAKCGLLSCARVVFYQIG 328
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-----HTGMV 548
+ V W+A+I G+ GD ++A FS M ++ + P+E+ ++L AC+ + GM
Sbjct: 329 RPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQ 388
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
G+ M D VP VC ++ + A+ L +A+ F E M D+ + A
Sbjct: 389 VHGY--INKMGLDLD-VP-----VCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAI 440
Query: 607 LHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVSNLYASDGRWIRV---NQVRELMK 661
L C + + + ++K M + PD Y+ ++N+ + + + NQV
Sbjct: 441 LTACMRHDQAEEVFRLLKLMCISQHRPD----YITLTNVLGASAETVSIEIGNQVHCYAL 496
Query: 662 QRGLS 666
+ GL+
Sbjct: 497 KTGLN 501
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 332/611 (54%), Gaps = 20/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ ++ G++ AR FDS+ N ++ +I Y K+ ++ M E
Sbjct: 102 LIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPS 161
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFD 204
F VL AC + G + H +++KVG F + T LV MY K + +RQVFD
Sbjct: 162 IITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFD 221
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++V ++ MI GY ++ ++ LF RM++ + N+I+ S++ C+ AL
Sbjct: 222 GLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAW 281
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H + G+ + + TAL+ MY+ CG+I AR VFD++ D+VSWT MI GY +
Sbjct: 282 GKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAE 341
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTV 383
+ + A LF + P+ +T +++A A +L++ R +HS +R G D V
Sbjct: 342 NSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLV 401
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
ALV MYAKC I DAR +F+ S +DV++W+++I +NV
Sbjct: 402 DTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNV 461
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD VT +++++AC LGA+ +G ++ + K L+S ++ VG AL+N K G + AR
Sbjct: 462 EPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVS-HIPVGNALINMNVKHGSIERAR 520
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F+ M +++ VTW+ MIGGY + G+ +L LF ML E +PN V F +LSACS G
Sbjct: 521 YIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAG 580
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
V EG + F + VP+M+ Y CMVDLL RAG L+EA + MP++P+ S++
Sbjct: 581 FVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTL 640
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C +Y D+ E ++ L P YV +S++YA+ G W V +VR++M+ RG+
Sbjct: 641 LAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVR 700
Query: 667 KSPGCSLVDLD 677
K GC+ ++++
Sbjct: 701 KEQGCTWIEVE 711
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 268/529 (50%), Gaps = 32/529 (6%)
Query: 140 RLKEHDNFV----FSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCR 194
RL E N + + K+ + C LRD G +V I++ G + + L L+ +++ C
Sbjct: 51 RLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICG 110
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
++ +RQ FD +K VV+W ++IAGY Q +E LF +M + +E + IT ++
Sbjct: 111 NMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLD 170
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
AC+ L GK H ++K+G + + TAL+ MYVK G++ AR VFD L D+ +
Sbjct: 171 ACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVST 230
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+ MI GY +SG +KA +LF + F PN ++ S+L + L G+ VH+ +
Sbjct: 231 FNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCM 290
Query: 375 RLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------- 425
GL +D V AL+ MY C I AR +F+ +DV++W +I G +N
Sbjct: 291 NTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFG 350
Query: 426 ---------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ PD +T + +I+ACAS + + +H+ + G +++ V TAL++ Y
Sbjct: 351 LFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAG-FGTDLLVDTALVHMY 409
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG + AR VFDAM ++ V+WSAMIG Y G G + F M V+P+ V +
Sbjct: 410 AKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYI 469
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L+AC H G + G + Y+ V + ++++ + G +E A ENM +
Sbjct: 470 NLLNACGHLGALDLGME-IYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENM-V 527
Query: 597 EPDVSLFGAFLHGCGLYSR----FDLGEVMIKKMLELHPDKACYYVLVS 641
+ DV + + G L+ DL + M+K+ P+ + ++S
Sbjct: 528 QRDVVTWNVMIGGYSLHGNAREALDLFDRMLKE--RFRPNSVTFVGVLS 574
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 159/508 (31%), Positives = 253/508 (49%), Gaps = 33/508 (6%)
Query: 37 LDQTFASFHSL------PSIPC-LNLLGLCKSTGSLK---AFHALLIVDGLTND-KCNTK 85
+ + FA F + PSI L +L C S LK FHA +I G +D + T
Sbjct: 143 VKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTA 202
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEH 144
LVSMY G + AR VFD + D +F VMI Y + D K FY+ ++ K
Sbjct: 203 LVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKP- 261
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVF 203
+ F +L C + G VH + + G D V T L+ MY C I +R+VF
Sbjct: 262 NRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVF 321
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D+ ++VVSWT MI GY +N ++ LF M+E ++ ++IT ++ ACA L
Sbjct: 322 DKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLS 381
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
+ +H +++ G + + TAL+ MY KCG I+DAR VFD + D+VSW+AMI Y
Sbjct: 382 LAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYV 441
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
++G ++A + F K + P+ VT ++L+A LG L++G +++ I+ L +
Sbjct: 442 ENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIP 501
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ NAL++M K I ARYIFE ++DV+ WN +I G L +
Sbjct: 502 VGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKER 561
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
P++VT V V+SAC+ G V+ G +Y + + + +++ + G+ A
Sbjct: 562 FRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEA 621
Query: 486 RMVFDAMREK-NTVTWSAMIGGYGMQGD 512
++ + M K N+ WS ++ + G+
Sbjct: 622 ELLINRMPLKPNSSIWSTLLAACRIYGN 649
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 142/469 (30%), Positives = 223/469 (47%), Gaps = 43/469 (9%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDS 105
I L++L C + +L KA HA + GL +D + T L+ MY G ++ AR VFD
Sbjct: 264 ISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDK 323
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M D S+ VMIR Y N +D + M++ + D + ++ AC D+
Sbjct: 324 MKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLA 383
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H ++V+ G G D V T LV MYAKC I +RQVFD ++VVSW++MI YV+N
Sbjct: 384 REIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVEN 443
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
C +E F+ M+ VE + +T +L+ AC L AL G ++ +K + + +
Sbjct: 444 GCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVG 503
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL++M VK G+I AR +F+ + D+V+W MI GY+ G +AL LF F
Sbjct: 504 NALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFR 563
Query: 345 PNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
PN VT VLSA ++ G + GR ++ GI +E Y +VD+ + + +
Sbjct: 564 PNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELY---GCMVDLLGRAGELDE 620
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
A + K P++ ++++AC G + V A +
Sbjct: 621 AELLINRMPLK-----------------PNSSIWSTLLAACRIYGNLDV-----AERAAE 658
Query: 460 GLLSSNVYVGTA---LLNFYAKCG---DAQSARMVFDA--MREKNTVTW 500
L S Y G L + YA G + R V ++ +R++ TW
Sbjct: 659 RCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTW 707
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 205/438 (46%), Gaps = 52/438 (11%)
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
+ +R+ EG + T L C LR GK + +I++ G ++N + + L+ ++
Sbjct: 48 VLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHS 107
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
CGN+ +AR FD + + +V+W A+I GY Q G+ +A LF P+ +T
Sbjct: 108 ICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLI 167
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
VL A + L +G+ H+ I++G + D+ + ALV MY K + AR +F+ ++D
Sbjct: 168 VLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRD 227
Query: 412 VIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
V +N +I G + P+ ++ +S++ C++ A+ G ++HA
Sbjct: 228 VSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHA 287
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
GL+ +V V TAL+ Y CG + AR VFD M+ ++ V+W+ MI GY +
Sbjct: 288 QCMNTGLV-DDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIE 346
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWKC--------- 554
+ LF+ M E +QP+ + + I++AC+ H+ +V G+
Sbjct: 347 DAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALV 406
Query: 555 -FYSMC---RDFKFV------PSMKHYVCMVDLLARAGRLEEALE---FMENMPIEPDVS 601
Y+ C +D + V + + M+ G EEA E M+ +EPDV
Sbjct: 407 HMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVV 466
Query: 602 LFGAFLHGCGLYSRFDLG 619
+ L+ CG DLG
Sbjct: 467 TYINLLNACGHLGALDLG 484
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/662 (33%), Positives = 353/662 (53%), Gaps = 32/662 (4%)
Query: 39 QTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC---NTKLVSMYGSFGH 95
Q +SF+SL KS +A HA I+ ++ C L++ Y H
Sbjct: 6 QNLSSFNSLVQFTHQ------KSLQKGRALHAQ-IIKLASSSSCIYLANSLINFYAKCCH 58
Query: 96 VKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD--IVEFYKCMRKRLKEHDNFVFSKVL 153
+ A+ VFD + N D S+ +I Y ++E ++ MR + FS +
Sbjct: 59 LPKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIF 118
Query: 154 KACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
A L I G + H +K+ D FV + L++MY K + +R+VFD ++N V
Sbjct: 119 TAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEV 178
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+W +MI+GY A E +F MR + N+ S+++A A + GK +H
Sbjct: 179 TWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLA 238
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
+K G+ + ++ AL+ MY KCG++ D+ VF+ + ++W+AMI GY QSG KAL
Sbjct: 239 VKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKAL 298
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMY 391
KLF+ +A P+ T+ VL+A + + G+ VH+ ++LG E ++ ALVDMY
Sbjct: 299 KLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMY 358
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLV 434
AK V DAR F + D++ W S+I+G N + P+ +T+
Sbjct: 359 AKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMA 418
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
SV+ AC++L A G +HA + K GL V +G+AL YAKCG+ + +VF M E
Sbjct: 419 SVLKACSNLAAFDQGRQIHARTIKYGL-GLEVTIGSALSTMYAKCGNLEEGNIVFRRMPE 477
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
++ ++W+AMI G G G +L LF +M ++ +P++V F +LSACSH G+V GW
Sbjct: 478 RDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLY 537
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYS 614
F M +F +P ++HY CMVD+L+RAG+L EA EF+E+ I+ + L+ L C Y
Sbjct: 538 FRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYR 597
Query: 615 RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
++LG +K++EL ++ YVL+S +Y + GR V +VR +MK RG+SK PGCS +
Sbjct: 598 NYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWI 657
Query: 675 DL 676
+L
Sbjct: 658 EL 659
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/534 (37%), Positives = 305/534 (57%), Gaps = 25/534 (4%)
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
+G+ VH +VK G G V L+ YAK I + VFDE ++++SW S+I G
Sbjct: 2 DGLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCA 61
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQI---TLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
N + + LF RM ++EG ++ TL S++ AC + G +HGY ++ G+
Sbjct: 62 SNGLYDKAVELFVRM---WLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLIS 118
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ L ALLDMY C + R +F + ++VSWTAMI YT++G+ DK LF +
Sbjct: 119 ETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMG 178
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIA 398
P+ I S L A A +L G+ VH IR G+E+ V NAL++MY KC +
Sbjct: 179 LEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYME 238
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACAS 442
+AR+IF+ ++KD I+WN++I G + + P+AVT+ ++ A AS
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQLRPNAVTMACILPAAAS 298
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L +++ G +HAY+ ++G L N +V AL++ Y KCG AR +FD + KN ++W+
Sbjct: 299 LSSLERGREMHAYAVRRGYLEDN-FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTI 357
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI GYGM G G ++ALF M +QP+ F+ IL ACSH+G+ EGW+ F +M +
Sbjct: 358 MIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEH 417
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
+ P +KHY CMVDLL G L+EA EF+E MPIEPD S++ + L GC ++ L E +
Sbjct: 418 RIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKV 477
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ + EL P+ YYVL++N+YA RW V +++ + RGL ++ GCS +++
Sbjct: 478 AEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEV 531
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 215/445 (48%), Gaps = 22/445 (4%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
CN L+S Y ++ A VFD MP D S+ +I N LY VE + M
Sbjct: 22 CNA-LISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEG 80
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
+E D+ V+ AC + G VH V+ G ++ + L+DMY+ C D S+
Sbjct: 81 QELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTN 140
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++F KNVVSWT+MI Y + + LF M + + + S + A A
Sbjct: 141 KIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNE 200
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+L GK +HGY ++ GIE + AL++MYVKCG + +AR +FD + D +SW +I
Sbjct: 201 SLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIG 260
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LE 379
GY++S ++A LF ++ PN VT+A +L A+A L +L GR +H+ +R G LE
Sbjct: 261 GYSRSNLANEAFTLF-NEMLLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLE 319
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------- 422
D V NALVDMY KC + AR +F+ + K++I+W +I+G
Sbjct: 320 DNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMK 379
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ PDA + +++ AC+ G G + + + +++ G+
Sbjct: 380 GSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNL 439
Query: 483 QSARMVFDAMR-EKNTVTWSAMIGG 506
+ A + M E ++ W +++ G
Sbjct: 440 KEAYEFIETMPIEPDSSIWVSLLRG 464
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HA + G D LV MY G + AR +FD + N + S+ +MI Y ++
Sbjct: 306 REMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMH 365
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+D + ++ M+ + D FS +L AC DEG +
Sbjct: 366 GRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWR 408
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/503 (40%), Positives = 302/503 (60%), Gaps = 29/503 (5%)
Query: 202 VFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+F++ +DK NV SW S+IA ++ + E L F+ MR+ ++ N+ T + +C+ L
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
LH G+ H L G E + + +AL+DMY KCG +RDAR++FDE+ ++VSWT+MI
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 226
Query: 321 GYTQSGYPDKALKLFTD--------KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
GY Q+ +AL LF + + + + + + SVLSA +++ ++ VH
Sbjct: 227 GYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGF 286
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GL---- 422
I+ G E D V N L+D YAKC + +R +F+ +E+DVI+WNSII+ G+
Sbjct: 287 LIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346
Query: 423 ---------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
D ++ +AVTL +V+ ACA G+ ++G +H K GL SNV+VGT+++
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGL-ESNVFVGTSII 405
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y KCG + AR FD MREKN +WSAM+ GYGM G +L +F +M V+PN +
Sbjct: 406 DMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYI 465
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F ++L+ACSH G++ EGW F +M +F P ++HY CMVDLL RAG L+EA + ++
Sbjct: 466 TFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKG 525
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M + PD ++GA L C ++ DLGE+ +K+ EL P YYVL+SN+YA GRW V
Sbjct: 526 MKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDV 585
Query: 654 NQVRELMKQRGLSKSPGCSLVDL 676
++R LMK GL K PG SLVD+
Sbjct: 586 ERMRILMKNSGLVKPPGFSLVDI 608
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 212/406 (52%), Gaps = 29/406 (7%)
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
+ MRK + + F +K+C L D+ G + H + + G PD FV + LVDMY+K
Sbjct: 140 FSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSK 199
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR--MREGFVEG------ 244
C ++ +R +FDE +N+VSWTSMI GYVQND A L+LF + E EG
Sbjct: 200 CGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCV 259
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ I + S+++AC+++ + +HG+++K G E + + L+D Y KCG + +R VF
Sbjct: 260 DPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVF 319
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNL 363
D + D++SW ++I Y Q+G +++++F K + N VT+++VL A A G+
Sbjct: 320 DGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQ 379
Query: 364 NMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+G+ +H I++GLE + +++DMY KC + AR F+ EK+V +W+++++G
Sbjct: 380 RLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY 439
Query: 423 D-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
V P+ +T VSV++AC+ G ++ G + + +
Sbjct: 440 GMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPG 499
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQ 510
V +++ + G + A + M+ + V W A++G M
Sbjct: 500 VEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMH 545
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 190/355 (53%), Gaps = 23/355 (6%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRL 141
++ LV MY G ++ AR++FD + + + S+ MI Y N D ++ ++ F + + +
Sbjct: 190 SSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEES 249
Query: 142 KEH-------DNFVFSKVLKACCEL--RDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
D VL AC + + I EG VH ++K G D V L+D YA
Sbjct: 250 GSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG--VHGFLIKRGFEGDLGVENTLMDAYA 307
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLG 250
KC ++G SR+VFD +++V+SW S+IA Y QN + E + +F+RM ++G + N +TL
Sbjct: 308 KCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 367
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
+++ ACA + GK +H ++K+G+E N + T+++DMY KCG + AR FD +
Sbjct: 368 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK 427
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG---- 366
++ SW+AM+ GY G+ +AL++F + A PN++T SVL+A + G L G
Sbjct: 428 NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWF 487
Query: 367 -RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSII 419
M H + G+E Y +VD+ + + +A + + D + W +++
Sbjct: 488 KAMSHEFDVEPGVEHY---GCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALL 539
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 59 CKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C +GS K H +I GL +N T ++ MY G V+ AR FD M + S+
Sbjct: 373 CAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSW 432
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M+ Y ++ K+ +E + M + + F VL AC ++EG
Sbjct: 433 SAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 483
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/595 (34%), Positives = 328/595 (55%), Gaps = 61/595 (10%)
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKC 193
CM ++ E + + VL+ C L+ + +G KVH I+K G D + LV YA C
Sbjct: 90 CMCQK-SELETKTYGSVLQLCAGLKSLTDGKKVH-SIIKSNSVGVDEALGLKLVSFYATC 147
Query: 194 RDIGSSRQVFD------------------------------------------------- 204
D+ R+VFD
Sbjct: 148 GDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASEL 207
Query: 205 --ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
+ D++V+SW SMI+GYV N + GL ++ +M ++ + T+ S++ CA L
Sbjct: 208 FDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTL 267
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H +K E + LLDMY KCG++ A VF+++ ++VSWT+MI GY
Sbjct: 268 SLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGY 327
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIRLGLEDY 381
T+ G+ D A+ L + + V I S+L A A+ G+L+ G+ VH + +
Sbjct: 328 TRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNL 387
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACA 441
V NAL+DMYAKC + A +F T KD+I+WN+++ L PD+ T+ ++ ACA
Sbjct: 388 FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL----KPDSRTMACILPACA 443
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
SL A++ G +H Y + G SS+ +V AL++ Y KCG AR++FD + K+ V+W+
Sbjct: 444 SLSALERGKEIHGYILRNGY-SSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWT 502
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
MI GYGM G G ++A F++M + ++P+EV F +IL ACSH+G++ +GW+ FY M D
Sbjct: 503 VMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKND 562
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
F P ++HY CMVDLL+R G L +A +F+E +PI PD +++GA L GC +Y +L E
Sbjct: 563 FNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEK 622
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +++ EL P+ YYVL++N+YA + V ++RE + ++GL K+PGCS +++
Sbjct: 623 VAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEI 677
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 180/370 (48%), Gaps = 40/370 (10%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A +FD + + D S+ MI Y N L + + YK M + D VL C
Sbjct: 204 ASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAN 263
Query: 159 LRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
+ G VH +K + L+DMY+KC D+ + +VF++ ++NVVSWTSM
Sbjct: 264 SGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSM 323
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
IAGY ++ + ++L +M + V+ + + + S++ ACA+ +L GK +H YI +
Sbjct: 324 IAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNM 383
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
N + AL+DMY KCG++ A SVF + D++SW M+
Sbjct: 384 ASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV------------------ 425
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHV 396
+ P+ T+A +L A A L L G+ +H +R G D V NALVD+Y KC V
Sbjct: 426 ---GELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGV 482
Query: 397 IADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISA 439
+ AR +F+ KD+++W +I+G D + PD V+ +S++ A
Sbjct: 483 LGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYA 542
Query: 440 CASLGAVQVG 449
C+ G ++ G
Sbjct: 543 CSHSGLLEQG 552
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/512 (24%), Positives = 217/512 (42%), Gaps = 102/512 (19%)
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
T+D V + + I + Q + + L ++ +E T GS++ CA L++L G
Sbjct: 61 TIDHQVTDYNAKILHFCQLGDLENAMELVCMCQKSELETK--TYGSVLQLCAGLKSLTDG 118
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV---------------------- 303
K +H I + ++ L L+ Y CG++++ R V
Sbjct: 119 KKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178
Query: 304 -----------------------------FDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
FD+LC D++SW +MI GY +G ++ L +
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
+ + + TI SVL A G L++G+ VHSL I+ E N L+DMY+K
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSK 298
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
C + A +FE E++V++W S+I+G + V D V + S+
Sbjct: 299 CGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSI 358
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ ACA G++ G +H Y K ++SN++V AL++ YAKCG + A VF M K+
Sbjct: 359 LHACARSGSLDNGKDVHDY-IKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKD 417
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
++W+ M+G E++P+ IL AC+ + G +
Sbjct: 418 IISWNTMVG---------------------ELKPDSRTMACILPACASLSALERGKEIHG 456
Query: 557 SMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+ R+ S +H +VDL + G L A + +P D+ + + G G++
Sbjct: 457 YILRN--GYSSDRHVANALVDLYVKCGVLGLARLLFDMIP-SKDLVSWTVMIAGYGMHGY 513
Query: 616 FDLGEVMIKKMLE--LHPDKACYYVLVSNLYA 645
+ +M + + PD+ + +S LYA
Sbjct: 514 GNEAIATFNEMRDAGIEPDEVSF---ISILYA 542
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 4/117 (3%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C S +L K H ++ +G ++D+ LV +Y G + AR +FD +P+ D
Sbjct: 438 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 497
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
S+ VMI Y ++ + + + MR E D F +L AC +++G +
Sbjct: 498 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/628 (33%), Positives = 336/628 (53%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L I G +D T LV MY + + +A ++F MP + + +I Y ND +
Sbjct: 193 HCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRF 252
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ ++ YK M F+ ++C L + G ++H +K G D+ V T
Sbjct: 253 TEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTAT 312
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMYAKC + +R+VF+ + S ++I GY + D E L +F +++ +++ ++
Sbjct: 313 LDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDE 372
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
I+L +TAC+ ++ +G LHG +K G++ N + +LDMY KCG + +A +FD+
Sbjct: 373 ISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDD 432
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I + Q+ + ++ L LF + P+ T SV+ A A LN G
Sbjct: 433 MEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYG 492
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
VH I+ G+ D+ V +A++DMY KC ++ +A I E E+ ++WNSIISG
Sbjct: 493 MEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSE 552
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
L V PD T +V+ CA+L V++G +H K L S+VY+
Sbjct: 553 KQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQL-HSDVYI 611
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+ +++ Y+KCG+ Q +R++F+ +++ VTWSAMI Y G G ++ LF +M + V
Sbjct: 612 ASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNV 671
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN IF ++L AC+H G V +G F M + P M+HY CMVDLL R+G++ EAL
Sbjct: 672 KPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEAL 731
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
E +E+MP E D ++ L C L ++ E +L+L P + YVL+SN+YA G
Sbjct: 732 ELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAG 791
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
W V ++R MK L K PGCS + +
Sbjct: 792 MWGEVAKIRSFMKNYKLKKEPGCSWIQV 819
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 191/630 (30%), Positives = 313/630 (49%), Gaps = 66/630 (10%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G++++A+ +FDSMP D S+ M+ Y N ++ +E + MR +HD F
Sbjct: 114 YAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATF 173
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETL 207
+ VLKAC + D G++VHC +++G DS V+TG LVDMY+ C+ + + +F E
Sbjct: 174 AVVLKACTGIEDYGLGLQVHCLAIQMGF-DSDVVTGTALVDMYSTCKKLDHAFNIFCEMP 232
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
++N V W+++IAGYV+ND EGL L+ M + + +Q T S +CA L A G
Sbjct: 233 ERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQ 292
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
LH Y LK ++ + TA LDMY KC + DAR VF+ + S A+IVGY +
Sbjct: 293 LHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQ 352
Query: 328 PDKALKLFT--DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
+AL++F K + DF + ++++ L+A + + G +H L ++ GL+ + V
Sbjct: 353 VLEALEIFRSLQKSYLDF--DEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVA 410
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
N ++DMYAKC + +A IF+ KD ++WN+II+ + N +
Sbjct: 411 NTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME 470
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD T SV+ ACA A+ G +H K G + + +VG+A+++ Y KCG A
Sbjct: 471 PDDYTFGSVVKACAGKKALNYGMEVHGRVIKSG-MGLDWFVGSAIIDMYCKCGMLVEAEK 529
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+ + + E+ TV+W+++I G+ + G +L+ FS ML V P+ + T+L C++
Sbjct: 530 IHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLAT 589
Query: 548 VGEGWKC---------------------FYSMCRD-------FKFVPSMKH--YVCMVDL 577
V G + YS C + F+ P + + M+
Sbjct: 590 VELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICA 649
Query: 578 LARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE---LHP 631
A G E+A++ E M ++ P+ ++F + L C D G ++M L P
Sbjct: 650 YAYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDP 709
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMK 661
Y +V L GR +VN+ EL++
Sbjct: 710 QMEHYSCMVDLL----GRSGQVNEALELIE 735
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 233/525 (44%), Gaps = 56/525 (10%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKC------------ 193
FS + + C L+ I+ G + H +I G P FV L+ Y KC
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 194 ---RDIGS----------------SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
RD+ S ++ +FD +++VVSW SM++ Y+QN ++ + +F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
+MR ++ + T ++ AC + G +H +++G + + TAL+DMY C
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+ A ++F E+ + V W+A+I GY ++ + LKL+ + T AS
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278
Query: 355 SASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
+ A L +G +H+ ++ D V A +DMYAKC + DAR +F T
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQ 338
Query: 414 AWNSIISGL--DDNVSP---------------DAVTLVSVISACASLGAVQVGSSLHAYS 456
+ N++I G D V D ++L ++AC+++ G LH +
Sbjct: 339 SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLA 398
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K G L N+ V +L+ YAKCG A ++FD M K+ V+W+A+I + +
Sbjct: 399 VKCG-LDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEET 457
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACS-----HTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
LALF ML ++P++ F +++ AC+ + GM G M D+ ++
Sbjct: 458 LALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDM 517
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
C +L A ++ E LE + +S F + G S F
Sbjct: 518 YCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYF 562
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 181/408 (44%), Gaps = 57/408 (13%)
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
++T + C+ L+A++ GK H I G + LL Y KC N+ A +VFD
Sbjct: 38 KLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFD 97
Query: 306 ELCSIDLVSWTAMIVGYT-------------------------------QSGYPDKALKL 334
++ D++SW MI GY Q+G+ K++++
Sbjct: 98 KMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEI 157
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
FT + + ++ T A VL A + + +G VH L I++G + D ALVDMY+
Sbjct: 158 FTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST 217
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSV 436
C + A IF E++ + W+++I+G LD+ + T S
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+CA L A ++G+ LHAY+ K N+ VGTA L+ YAKC AR VF+
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNI-VGTATLDMYAKCDRMVDARKVFNTFPNPT 336
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
+ +A+I GY Q +L +F + + +E+ + L+ACS EG +
Sbjct: 337 RQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHG 396
Query: 557 SMCR---DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
+ DF + ++D+ A+ G L EA ++M I+ VS
Sbjct: 397 LAVKCGLDFNICVANT----ILDMYAKCGALMEACLIFDDMEIKDAVS 440
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 349/652 (53%), Gaps = 25/652 (3%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDS 105
I +++L C S L K H+ +I G D + L+SMYG G + AR VF
Sbjct: 129 ITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAG 188
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ D S+ M+ Y K+ + + M D + +L A +DEG
Sbjct: 189 ISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H V+ G D V T LV M +C D+ S++Q F D++VV + ++IA Q+
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQH 308
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E + RMR V N+ T S++ AC+ +AL GK +H +I + G + +
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIG 368
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+ MY +CG++ AR +F + DL+SW A+I GY + +A++L+ +
Sbjct: 369 NALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P VT +LSA A G+M+H +R G++ + + NAL++MY +C + +A+ +
Sbjct: 429 PGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNV 488
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
FE T +DVI+WNS+I+G ++ + PD +T SV+S C + A+
Sbjct: 489 FEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEAL 548
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++G +H T+ GL +V +G AL+N Y +CG Q AR VF +++ ++ ++W+AMIGG
Sbjct: 549 ELGKQIHGRITESGL-QLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGG 607
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNE-VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
QG+ ++ LF M NE +P + FT+ILSAC+H G+V EG++ F SM ++ +
Sbjct: 608 CADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVL 667
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P+++HY C+V LL RA R +EA + MP PD +++ L C ++ L E
Sbjct: 668 PTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANN 727
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
L+L+ Y+L+SN+YA+ GRW V ++R +M+ RG+ K PG S +++D
Sbjct: 728 ALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVD 779
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 271/526 (51%), Gaps = 26/526 (4%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
+ R E D + +L+ C R + E ++H ++V+ G GPD F+ L++MY KCR +
Sbjct: 19 QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ QVF E ++V+SW S+I+ Y Q ++ LF M+ N+IT S++TAC
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
L GK +H I+K G + + + +LL MY KCG++ AR VF + D+VS+
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
M+ Y Q Y + L LF P+ VT ++L A L+ G+ +H L +
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
GL D V ALV M +C + A+ F+ +++DV+ +N++I+ L
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQY 318
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
D V+ + T +S+++AC++ A++ G +H++ ++ G SS+V +G AL++ YA+
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDG-HSSDVQIGNALISMYAR 377
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CGD AR +F M +++ ++W+A+I GY + D G ++ L+ M +E V+P V F +
Sbjct: 378 CGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHL 437
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIE 597
LSAC+++ +G + R + S H ++++ R G L EA E
Sbjct: 438 LSACANSSAYADGKMIHEDILRS--GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR 495
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVS 641
DV + + + G + ++ + ++M EL PD + ++S
Sbjct: 496 -DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/575 (35%), Positives = 333/575 (57%), Gaps = 24/575 (4%)
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV 182
L+ L K + + + + + F+ +L C L D+ ++H +V G + +
Sbjct: 6 LSTLLKGLAPIKRVLFDFRTNYHSRSFNYLLNCCSSLPDLS---RIHALVVTNGCGQNLL 62
Query: 183 LTGLVDMYAKC--RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
L+ + + A C + +R++FD+ ++V W ++I GY +E L L++ M
Sbjct: 63 LSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGA 122
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+ + T +V +CA L AL +GK +H I+K G + + + ++L+ MY + G
Sbjct: 123 GLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGM 182
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
VF E+ ++VSWTA+I GY Q+ Y + L +F + + PN VT+ SVL A A L
Sbjct: 183 ELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGL 242
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
LN+G+++H GI+LG++ D ++ NAL+ +Y KC + AR +F+ +++++WN++I
Sbjct: 243 EFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMI 302
Query: 420 SGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+ + N V D +T+VSVISACASLGA+ G +H ++GL
Sbjct: 303 AAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGL- 361
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
NV + AL++ YAKCG+ AR VF+ + ++ V+W++MIG G G +L LFS
Sbjct: 362 EINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSR 421
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M +E V+PN F + +AC H+G+V EG K F SM RD+ +P ++H CMVDLL RAG
Sbjct: 422 MKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAG 481
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
L EA EF++ MP+EPDVS++GA L C ++S +L E++ +K+ L P +YVL+SN
Sbjct: 482 SLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSN 541
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+YA GRW ++R+LM++R L K PG SLV+++
Sbjct: 542 IYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVN 576
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/473 (34%), Positives = 245/473 (51%), Gaps = 22/473 (4%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGH-VKYARSVFDSMPNPDFY 112
LL C S L HAL++ +G N +TKL+ + YAR +FD MP D +
Sbjct: 35 LLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVF 94
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+ +IR Y ++ + Y M DN+ F V+++C L + EG +VHC I
Sbjct: 95 LWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNI 154
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
VK G D FV + LV MY++ + VF E + +N+VSWT++IAGYVQN +EGL
Sbjct: 155 VKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGL 214
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
+F M + N +TL S++ ACA L L+ GK +HGY +K+G++ + L AL+ +Y
Sbjct: 215 GVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALY 274
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
KCGN+ ARS+FD + +LVSW AMI Y Q+ A+KLF + +++T+
Sbjct: 275 GKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMV 334
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
SV+SA A LG LN GR +H L R GLE + ++ NAL+DMYAKC I AR +FE +
Sbjct: 335 SVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCR 394
Query: 411 DVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
V++W S+I D+ V P++ T +V +AC G V+ G
Sbjct: 395 SVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHF 454
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIG 505
+ + V +++ + G A D M E + W A++G
Sbjct: 455 ESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLG 507
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 344/610 (56%), Gaps = 27/610 (4%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
F + R VFD+M + ++ MI WY + + + ++ M + F V
Sbjct: 165 FNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNV 224
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
A + D D ++ +VK+G D FV++ + MYA+ + +R++FD L++
Sbjct: 225 FPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLER 284
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF-VEGNQITLGSLVTACAKLRALHQGKWL 268
N W +MI GYVQN+C E + LF ++ E + +T S +TA ++L+ L G+ L
Sbjct: 285 NTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQL 344
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H YILK + ++ A++ MY +CG+I + VF + D+V+W M+ + Q+G
Sbjct: 345 HAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLD 404
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALV 388
D+ L L + + F + VT+ ++LS ++ L + +G+ H+ IR G++ + L+
Sbjct: 405 DEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGYLI 464
Query: 389 DMYAKCHVIADARYIFETTS--EKDVIAWNSIISG-----------------LDDNVSPD 429
DMYAK +I A+ +FE S ++D WN++I+G ++ NV P+
Sbjct: 465 DMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPN 524
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
AVTL S++ AC +G + +G +H ++ + L+ NV+VGTALL+ Y+K G A VF
Sbjct: 525 AVTLASILPACNPMGTIGLGKQIHGFAIR-CFLNQNVFVGTALLDMYSKSGAITYAENVF 583
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
EKN+VT++ MI YG G G +L+LF ML ++P+ V F ILSACS+ G+V
Sbjct: 584 AETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVD 643
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV-SLFGAFLH 608
EG + F SM R++K PS +HY C+ D+L R GR+ EA EF++ + E + ++G+ L
Sbjct: 644 EGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLG 703
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKAC--YYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
C ++ F+LG+V+ K+LE+ Y+VL+SN+YA++G W V++VR+ M+Q+GL
Sbjct: 704 ACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLM 763
Query: 667 KSPGCSLVDL 676
K GCS V++
Sbjct: 764 KEAGCSWVEV 773
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 177/674 (26%), Positives = 308/674 (45%), Gaps = 84/674 (12%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKV 152
GH A +FDS+P P + +I + N++ D + FY MR + D++ FS
Sbjct: 51 GHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSST 110
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD----IGSS-------- 199
LKAC + R + G +HC +++ G V L++MY+ C +G++
Sbjct: 111 LKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDL 170
Query: 200 -RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
R+VFD +NVV+W +MI+ YV+ + E +F M + ++ ++ A +
Sbjct: 171 VRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWR 230
Query: 259 LRALHQGKWLHGYILKIGIEI--NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ L+G ++K+G + + +V++ + MY + G + AR +FD + W
Sbjct: 231 MNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWN 290
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI GY Q+ P +A+ LF ++ F + VT S L+A +QL L++GR +H+ ++
Sbjct: 291 TMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILK 350
Query: 376 LG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDN---- 425
+ ++NA++ MY++C I + +F E+DV+ WN+++S GLDD
Sbjct: 351 SSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLML 410
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
D+VTL +++S ++L + ++G HAY + G+ + L++ YA
Sbjct: 411 VFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG--MDGYLIDMYA 468
Query: 478 KCGDAQSARMVFD--AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
K G +A+ +F+ + +++ TW+AMI GY G A+F M+ + V+PN V
Sbjct: 469 KSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTL 528
Query: 536 TTILSACSHTGMVGEG-------WKCF--------------YSMCRDFKFVPSM------ 568
+IL AC+ G +G G +CF YS + ++
Sbjct: 529 ASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLE 588
Query: 569 ---KHYVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
Y M+ + G E AL M I+PD F A L C D G +
Sbjct: 589 KNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRI 648
Query: 623 IKKM---LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP----GCSLVD 675
+ M ++ P +Y V+++ GR RV + E +K G + G L
Sbjct: 649 FQSMEREYKIQPSSE-HYCCVADML---GRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGA 704
Query: 676 LDIANDFSFSRVVS 689
I +F +VV+
Sbjct: 705 CRIHGEFELGKVVA 718
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/386 (30%), Positives = 202/386 (52%), Gaps = 25/386 (6%)
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHD 145
+ MY G V +AR +FD + + MI Y N+ + ++ F + M D
Sbjct: 262 IFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLD 321
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ F L A +L+ +D G ++H I+K +L ++ MY++C IG+S +VF
Sbjct: 322 DVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFS 381
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVL-FNRMREGFVEGNQITLGSLVTACAKLRALH 263
L+++VV+W +M++ +VQN EGL+L F ++GF+ + +TL +L++ + LR+
Sbjct: 382 NMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMV-DSVTLTALLSLASNLRSQE 440
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL--VSWTAMIVG 321
GK H Y+++ GI+ + L+DMY K G I A+ +F++ D +W AMI G
Sbjct: 441 IGKQAHAYLIRHGIQFEG-MDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAG 499
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-ED 380
YTQ+G ++ +F + PN VT+AS+L A +G + +G+ +H IR L ++
Sbjct: 500 YTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQN 559
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII-----------------SGLD 423
V AL+DMY+K I A +F T EK+ + + ++I + L
Sbjct: 560 VFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLG 619
Query: 424 DNVSPDAVTLVSVISACASLGAVQVG 449
+ PD+VT V+++SAC+ G V G
Sbjct: 620 SGIKPDSVTFVAILSACSYAGLVDEG 645
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 117/239 (48%), Gaps = 4/239 (1%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFD--SMPNPDFYSFQVMIRWYFL 123
K HA LI G+ + + L+ MY G + A+ +F+ S + D ++ MI Y
Sbjct: 443 KQAHAYLIRHGIQFEGMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQ 502
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
N L ++ ++ M ++ + + +L AC + I G ++H ++ + FV
Sbjct: 503 NGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFV 562
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+DMY+K I + VF ETL+KN V++T+MI Y Q+ + L LF+ M +
Sbjct: 563 GTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGI 622
Query: 243 EGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+ + +T ++++AC+ + +G + + I+ +S + DM + G + +A
Sbjct: 623 KPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEA 681
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 33 TQHEL-DQTFASFHSL-------PSIPCLNLLGLCKSTGSL---KAFHALLIVDGLT-ND 80
TQ+ L ++ FA F + ++ ++L C G++ K H I L N
Sbjct: 501 TQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNV 560
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
T L+ MY G + YA +VF + ++ MI Y + + + + + M
Sbjct: 561 FVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGS 620
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ D+ F +L AC +DEG+++
Sbjct: 621 GIKPDSVTFVAILSACSYAGLVDEGLRI 648
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 349/647 (53%), Gaps = 28/647 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L+ S L HA +I+ G ND TKL G + YAR +F S+ PD
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF-VFSKVLKACCELRDIDEGMKVHC 170
+ F V++R + +N+ + + +RK N ++ + A RD G +H
Sbjct: 84 FLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHG 143
Query: 171 EIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ V V G DS +L G +V MY K + +R+VFD +K+ + W +MI+GY +N+
Sbjct: 144 QAV-VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 229 EGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E + +F + + E + TL ++ A A+L+ L G +H K G + +++T
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ +Y KCG I+ ++F E D+V++ AMI GYT +G + +L LF + +
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFET 406
T+ S++ S G+L + +H ++ L +V AL +Y+K + I AR +F+
Sbjct: 323 STLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE 379
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+ EK + +WN++ISG N SP+ VT+ ++SACA LGA+ +G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H + S++YV TAL+ YAKCG AR +FD M +KN VTW+ MI GYG+
Sbjct: 440 KWVHDL-VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 498
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L +F +MLN + P V F +L ACSH G+V EG + F SM + F PS+K
Sbjct: 499 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVD+L RAG L+ AL+F+E M IEP S++ L C ++ +L + +K+ EL
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 618
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
PD Y+VL+SN++++D + + VR+ K+R L+K+PG +L+++
Sbjct: 619 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/625 (35%), Positives = 349/625 (55%), Gaps = 69/625 (11%)
Query: 119 RWYFLNDLYKDIVEFYKCMRK--------------RLKEH----DNFVFSKVLKACCELR 160
RWY + +KD + + K R++ H +NF F +LKAC LR
Sbjct: 7 RWYXCSISHKDTFHWNSLIAKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALR 66
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK--NVVSWTSM 217
+ ++VH + ++G D F LVD Y KC + QVFDE + +VVSWT++
Sbjct: 67 RLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTAL 126
Query: 218 IAGYVQNDCAQEGLVLFNRMR--EGFVEGNQ------ITLGSLVTACA---KLRALHQGK 266
I+ Y N C E F RMR G+ +G++ ++LG+LV+ACA L +G
Sbjct: 127 ISAYSSNGCVDEAFXAFGRMRWMRGW-DGSECCGVDVVSLGALVSACAVGCGSNCLRRGS 185
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD--ELCSIDLVSWTAMIVGYTQ 324
+HG ++K G +++HL +++ MY C ++ A VF+ + D+VSW ++I G+
Sbjct: 186 AVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXL 245
Query: 325 SGYPDKALKLFTD---KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIR----L 376
+G ++AL+ F D + + PN VT+ ++L + A+LG + VH + R L
Sbjct: 246 NGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLL 305
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD------------ 424
+D V+ AL+DM+A+C +A AR IF+ K+V+ W+++I+G +
Sbjct: 306 VAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFR 365
Query: 425 -----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
V P+AVTLVSVI+AC+ LGA + S +H Y+ GL + + +AL+
Sbjct: 366 QMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGL-DQDARIASALI 424
Query: 474 NFYAKCGDAQSARMVFDAMRE--KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
+ AKCGD + R VF M E + V+WS+MIG G+ G+G +L LFS+M +PN
Sbjct: 425 DMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPN 484
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
E+ + ++LSACSH G+V +G CF SM +D+ P+ KHY C+VDLL RAG L+EA +
Sbjct: 485 EITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVI 544
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
NMPI+ D++L+G+ L C L+ LGE++ KK+L L + ++VL++N+Y GRW
Sbjct: 545 LNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWD 604
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDL 676
V ++R +++ GL K PG S +++
Sbjct: 605 DVVRMRVELRRSGLRKIPGQSFIEI 629
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 160/555 (28%), Positives = 253/555 (45%), Gaps = 72/555 (12%)
Query: 14 TKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAF----- 68
T+ P+ L FF T Q H++PS L K+ +L+
Sbjct: 30 TQNPQTALTFF--TRMQA-------------HAVPSNN-FTFPALLKACAALRRLLPTLQ 73
Query: 69 -HALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMP--NPDFYSFQVMIRWYFLN 124
HA L GL D+ + LV YG GH YA VFD MP + D S+ +I Y N
Sbjct: 74 VHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSN 133
Query: 125 DLYKDIVEFYKCMR-------KRLKEHDNFVFSKVLKAC---CELRDIDEGMKVHCEIVK 174
+ + MR D ++ AC C + G VH +VK
Sbjct: 134 GCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVK 193
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQEGL 231
G G + + +V MY+ C+D+G + +VF+ ++VVSW S+I+G+ N A+ L
Sbjct: 194 YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERAL 253
Query: 232 VLFNRM-REGF--VEGNQITLGSLVTACAKLRALHQGKWLHGYI----LKIGIEINSHLV 284
F M EG VE N++T+ +L+ +CA+L + W+H YI + + + ++
Sbjct: 254 RTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVL 313
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT------DK 338
TALLDM+ +CGN+ AR +FD + ++V W+AMI GY Q P++AL+LF +
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVI 397
+ PN VT+ SV++A ++LG M+H + GL +D + +AL+DM AKC I
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433
Query: 398 ADARYIFETTSE--KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVIS 438
R +F E + V++W+S+I P+ +T +SV+S
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NT 497
AC+ G V+ G S K +S L++ + G A V M K +
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553
Query: 498 VTWSAMIGGYGMQGD 512
W +++ + G+
Sbjct: 554 ALWGSLLAACHLHGN 568
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/549 (35%), Positives = 318/549 (57%), Gaps = 29/549 (5%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG---GPD--SFVLTGLVDMYAKCRDIGSSRQVFDET 206
+L+ C +RD++E +H ++K P +L + D S +F +
Sbjct: 30 ILEQCKTIRDLNE---IHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVS--IFRQI 84
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ + ++ MI G+ E ++LF M E V+ ++ T ++ C++L+AL +G+
Sbjct: 85 DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGE 144
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+H I+K G + + L+ MY CG + AR VFDE+ ++ +W +M GYT+SG
Sbjct: 145 QIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSG 204
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
++ +KLF + D + VT+ SVL+A +L +L +G ++ GL+ + T+I
Sbjct: 205 NWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLIT 264
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-----------------NVSP 428
+LVDMYAKC + AR +F+ +DV+AW+++ISG N+ P
Sbjct: 265 SLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDP 324
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
+ +T+VS++S+CA LGA++ G +H + K+ + V +GTAL++FYAKCG +S+ V
Sbjct: 325 NEITMVSILSSCAVLGALETGKWVHFF-IKKKRMKLTVTLGTALMDFYAKCGSVESSIEV 383
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F M KN ++W+ +I G G G +L F ML + V+PN+V F +LSACSH G+V
Sbjct: 384 FGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLV 443
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
EG F SM RDF P ++HY CMVD+L RAG +EEA +F++NMPI+P+ ++ L
Sbjct: 444 DEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLA 503
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C ++ ++GE +K+++ L P + Y+L+SN+YAS GRW +VR MK++G+ K+
Sbjct: 504 SCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKT 563
Query: 669 PGCSLVDLD 677
PGCSL++LD
Sbjct: 564 PGCSLIELD 572
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 172/588 (29%), Positives = 283/588 (48%), Gaps = 66/588 (11%)
Query: 30 QTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVS 88
+TPT S P P +L CK+ L HA LI L K L+
Sbjct: 11 KTPTAK------TSISLFPENPKTLILEQCKTIRDLNEIHAHLIKTRLLLKPKVAENLLE 64
Query: 89 MYGSF--GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
+ YA S+F + PD ++ +MIR + L + + +K M + + D
Sbjct: 65 SAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDE 124
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
F F +LK C L+ + EG ++H I+K G G FV L+ MYA C ++ +R+VFDE
Sbjct: 125 FTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDE 184
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
++NV +W SM AGY ++ +E + LF+ M E + +++TL S++TAC +L L G
Sbjct: 185 MSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELG 244
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+W++ Y+ + G++ N L+T+L+DMY KCG + AR +FD++ D+V+W+AMI GY+Q+
Sbjct: 245 EWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQA 304
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
+AL LF + + A+ PN +T+ S+LS+ A LG L G+ VH + ++ T+
Sbjct: 305 SRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLG 364
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVS 427
AL+D YAKC + + +F K+V++W +I G L+ NV
Sbjct: 365 TALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVE 424
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+ VT + V+SAC+ G V G L ++ + + +++ + G + A
Sbjct: 425 PNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEA-- 482
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F + N +QPN VI+ T+L++C
Sbjct: 483 --------------------------------FQFIKNMPIQPNAVIWRTLLASCKVHKN 510
Query: 548 VGEGWKCFYSMCRDFKFVPSMK-HYVCMVDLLARAGRLEEALEFMENM 594
V G + + P+ Y+ + ++ A GR E+AL+ M
Sbjct: 511 VEIGEESLKQL---IILEPTHSGDYILLSNIYASVGRWEDALKVRGEM 555
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/670 (34%), Positives = 357/670 (53%), Gaps = 36/670 (5%)
Query: 51 PCL--NLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
PCL GLC + +L + L + L++MY G V+ A +F+ MP
Sbjct: 113 PCLIKAFGGLCDVYKGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPE 172
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV--FSKVLKACCELRDIDEGM 166
D S+ MI + + Y + F++ M + N V S +L +C L+ + G
Sbjct: 173 VDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSIL-SCSSLQSLTHGR 231
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-----NVVSWTSMIAG 220
++H +VK G + ++++ L++MY KC I ++ +F+ LDK N V W MI+G
Sbjct: 232 EIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISG 291
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
YV N C + L+LF +M ++ + T+ SL + C++ + GK +HG I K G++ N
Sbjct: 292 YVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNN 351
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
+ TALLDMY+KCG++ +F + +L+ W+A+I QSG P KAL+LF + K
Sbjct: 352 IRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKM 411
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIAD 399
D + + +VL A + L G +H L ++G + D V +ALVD+YAKC +
Sbjct: 412 EDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGY 471
Query: 400 ARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACAS 442
++ +F S+KD+++WN++ISG + + P+ VT+ ++S CA
Sbjct: 472 SKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAH 531
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L + + +H Y +QGL S V V +L+ YAKCGD S+ F+ M E+N V+W++
Sbjct: 532 LSVMTLCKEVHGYLIRQGL-GSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVSWNS 590
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
+I G GM + LF M+ ++P+ V FT ILSACSH G V EG K F SM DF
Sbjct: 591 IILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKYFKSMVEDF 650
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P ++ Y CMVDLL RAG L +A + + MP PD ++G+ L C + L E++
Sbjct: 651 NLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHGDEILAEIV 710
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD----- 677
+ +L P Y VL++NLY + G+ ++VR +K GL K PGCS +++D
Sbjct: 711 ANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWIEVDNNFHI 770
Query: 678 -IANDFSFSR 686
IA D S S+
Sbjct: 771 FIAGDRSHSQ 780
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 162/560 (28%), Positives = 294/560 (52%), Gaps = 45/560 (8%)
Query: 117 MIRWYFLNDLYKDIVEFY-KCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
+IR Y + + D + Y K + +K + F ++KA L D+ +G ++H ++K+
Sbjct: 79 VIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVLKL 138
Query: 176 GGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
G D V+ L+ MY KC + + Q+F++ + ++VSW +MI+G+ ++ L+ F
Sbjct: 139 GVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLMFF 198
Query: 235 NRMREGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
M F + N++ S + +C+ L++L G+ +HG ++K G+++ +LV++L++MY+K
Sbjct: 199 RSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMK 258
Query: 294 CGNIRDARSVFDELCSIDLVS-----WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
CG+I++A ++F+ + D V W MI GY +G +AL LF P++
Sbjct: 259 CGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYS 318
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
T+ S+ S ++ ++ G+ +H L + GL+ + V AL+DMY KC + IF +
Sbjct: 319 TMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRS 378
Query: 408 SEKDVIAWNSIISGLDDNVSP-----------------DAVTLVSVISACASLGAVQVGS 450
++I W+++IS + P D+ LV+V+ AC+SL G
Sbjct: 379 QNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGM 438
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H +TK G + S+V+VG+AL++ YAKC D ++ VF + +K+ V+W+A+I GY
Sbjct: 439 QIHGLATKMGFV-SDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQD 497
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD---FKFVPS 567
+L F DM EE++PN V ILS C+H ++ ++C++ +
Sbjct: 498 ECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVM--------TLCKEVHGYLIRQG 549
Query: 568 MKHYVCMVDLL----ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+ V + + L A+ G + +L E MP DVS + + + G G++SR D V+
Sbjct: 550 LGSTVLVSNSLIATYAKCGDINSSLYTFEKMPERNDVS-WNSIILGMGMHSRTDEMIVLF 608
Query: 624 KKMLE--LHPDKACYYVLVS 641
KM+ + PD + ++S
Sbjct: 609 DKMVASGIKPDHVTFTAILS 628
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 214/633 (33%), Positives = 341/633 (53%), Gaps = 25/633 (3%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
K H +++V G D NT LV MY ++ +FD +P + S+ + Y
Sbjct: 177 KQVHGVVVVSGFEGDVFVANT-LVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235
Query: 124 NDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSF 181
D + V FY+ + +K ++ F S ++ AC LRD G +H ++K+G D F
Sbjct: 236 IDFCGEAVGLFYEMVLSGIKPNE-FSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
LVDMYAK D+ + VF++ ++VSW ++IAG V ++ ++ L L +M+
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSG 354
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ N TL S + ACA + G+ LH ++K+ +E + + L+DMY KC + DAR
Sbjct: 355 ICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 414
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
F+ L DL++W A+I GY+Q +AL LF + N T++++L ++A L
Sbjct: 415 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 474
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+++ R VH L ++ G D V+N+L+D Y KC + DA IFE + D++++ S+I+
Sbjct: 475 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 534
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
D + PD S+++ACA+L A + G LH + K G +
Sbjct: 535 AYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 594
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+++ G +L+N YAKCG A F + E+ V+WSAMIGG G G +L LF+ M
Sbjct: 595 -DIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQM 653
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
L E V PN + ++L AC+H G+V E F SM F F P +HY CM+DLL RAG+
Sbjct: 654 LKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGK 713
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
+ EA+E + MP E + S++GA L ++ +LG + + L P+K+ +VL++N+
Sbjct: 714 INEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANI 773
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YAS G+W V +VR LM+ + K PG S +++
Sbjct: 774 YASAGKWENVAEVRRLMRDSKVKKEPGMSWIEV 806
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 197/608 (32%), Positives = 320/608 (52%), Gaps = 31/608 (5%)
Query: 6 LLQR-HVSRTKKPKL--QLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKST 62
L QR H+ PKL + FS Q T + +D+ +F + S+ LL C +T
Sbjct: 13 LHQRLHLPFKPAPKLIQTVPQFSQDPQTTAILNLIDK--GNF-TPTSVSYSKLLSQCCTT 69
Query: 63 GSLKA---FHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
SL+ HA + GL++D L+++Y + YAR + D PD S+ +I
Sbjct: 70 KSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALI 129
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
Y N L + + M + + F FS VLKAC ++D+ G +VH +V G
Sbjct: 130 SGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE 189
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FV LV MYAKC + S+++FDE ++NVVSW ++ + YVQ D E + LF M
Sbjct: 190 GDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEM 249
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
++ N+ +L S+V AC LR +GK +HGY++K+G + + AL+DMY K G++
Sbjct: 250 VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDL 309
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
DA SVF+++ D+VSW A+I G + ++AL+L K + PN T++S L A
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKAC 369
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A +G +GR +HS +++ +E D V LVDMY+KC ++ DAR F EKD+IAWN
Sbjct: 370 AGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWN 429
Query: 417 SIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+IISG + + + TL +++ + A L V V +H S K
Sbjct: 430 AIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS 489
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G S++YV +L++ Y KC + A +F+ + V++++MI Y G G +L L
Sbjct: 490 G-FHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKL 548
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F +M + E++P+ + +++L+AC++ +G K + + FV + +V++ A
Sbjct: 549 FLEMQDMELKPDRFVCSSLLNACANLSAFEQG-KQLHVHILKYGFVLDIFAGNSLVNMYA 607
Query: 580 RAGRLEEA 587
+ G +++A
Sbjct: 608 KCGSIDDA 615
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 292/575 (50%), Gaps = 64/575 (11%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+SK+L CC + + G+++H I K G D + L+++Y+KCR+ G +R++ DE+
Sbjct: 59 YSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESS 118
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+ ++VSW+++I+GY QN L+ F+ M V+ N+ T S++ AC+ ++ L GK
Sbjct: 119 EPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQ 178
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG ++ G E + + L+ MY KC D++ +FDE+ ++VSW A+ Y Q +
Sbjct: 179 VHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDF 238
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
+A+ LF + + PN +++S+++A L + + G+++H I+LG + D NA
Sbjct: 239 CGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA 298
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPD 429
LVDMYAK +ADA +FE + D+++WN++I+G + P+
Sbjct: 299 LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPN 358
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
TL S + ACA +G ++G LH+ K + S+++V L++ Y+KC + ARM F
Sbjct: 359 IFTLSSALKACAGMGLKELGRQLHSSLMKMD-MESDLFVSVGLVDMYSKCDLLEDARMAF 417
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS------ 543
+ + EK+ + W+A+I GY + +L+LF +M E + N+ +TIL + +
Sbjct: 418 NLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVH 477
Query: 544 -----HTGMVGEGW---------------KCFYSMCRDFKF----VPSMKHYVCMVDLLA 579
H V G+ KC + + F + + + M+ A
Sbjct: 478 VCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYA 537
Query: 580 RAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
+ G+ EEAL+ M++M ++PD + + L+ C S F+ G K L +H K +
Sbjct: 538 QYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG-----KQLHVHILKYGF 592
Query: 637 YVLV------SNLYASDGRWIRVNQVRELMKQRGL 665
+ + N+YA G + + +RG+
Sbjct: 593 VLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGI 627
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 201/418 (48%), Gaps = 24/418 (5%)
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
+ N + +G ++ L++ C ++L G +H +I K G+ + + L+++Y
Sbjct: 43 ILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYS 102
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
KC N AR + DE DLVSW+A+I GY Q+G AL F + N T +S
Sbjct: 103 KCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSS 162
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
VL A + + +L +G+ VH + + G E D V N LV MYAKC D++ +F+ E++
Sbjct: 163 VLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERN 222
Query: 412 VIAWNSIIS------------GLD-----DNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
V++WN++ S GL + P+ +L S+++AC L G +H
Sbjct: 223 VVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
Y K G + + AL++ YAK GD A VF+ +++ + V+W+A+I G +
Sbjct: 283 YLIKLG-YDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHE 341
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
+L L M + PN ++ L AC+ G+ G + S+ + + V +
Sbjct: 342 QALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMK-MDMESDLFVSVGL 400
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
VD+ ++ LE+A +P E D+ + A + G YS++ + +E+H +
Sbjct: 401 VDMYSKCDLLEDARMAFNLLP-EKDLIAWNAIISG---YSQYWEDMEALSLFVEMHKE 454
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 221/659 (33%), Positives = 353/659 (53%), Gaps = 35/659 (5%)
Query: 45 HSLPSIPCLNLLGLCKSTGSLKAFHALLIVD------GLTNDK-CNTKLVSMYGSFGHVK 97
H+LP + KS +L A H +V GL D + L+ MY G +
Sbjct: 148 HTLPYV--------VKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLD 199
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
AR VFD M D + VM+ Y V ++ MR + + + L C
Sbjct: 200 GAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCA 259
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
D+ G+++H VK G P+ V LV MYAKC+ + + ++F ++V+W
Sbjct: 260 AEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNG 319
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
MI+G VQN + L LF M++ ++ + +TL SL+ A +L QGK +HGYI++
Sbjct: 320 MISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNC 379
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
++ LV+AL+D+Y KC ++R A++VFD SID+V + MI GY + + A+K+F
Sbjct: 380 AHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFR 439
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCH 395
PN V +AS L A A + + +G+ +H ++ E + +AL+DMY+KC
Sbjct: 440 YLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCG 499
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDNVSPDA-----------------VTLVSVIS 438
+ + Y+F S KD + WNS+IS N P+ VT+ S++S
Sbjct: 500 RLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILS 559
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
ACA L A+ G +H K G + ++++ +AL++ Y KCG+ + A VF+ M EKN V
Sbjct: 560 ACAGLPAIYYGKEIHGIIIK-GPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEV 618
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
+W+++I YG G S+ L M E + + V F ++SAC+H G V EG + F M
Sbjct: 619 SWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCM 678
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
++ P ++H CMVDL +RAG+L++A++F+ +MP +PD ++GA LH C ++ +L
Sbjct: 679 TEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVEL 738
Query: 619 GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
E+ +++ +L P YYVL+SN+ A GRW V+++R LMK + + K PG S VD++
Sbjct: 739 AEIASQELFKLDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVN 797
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 179/611 (29%), Positives = 283/611 (46%), Gaps = 41/611 (6%)
Query: 30 QTPTQHELDQTFASFHSLPS--IPC----LNLLGLCKSTGSLK---AFHALLIVDGLTND 80
+ P + L F+ S + PC L LL C + L HA + GL +
Sbjct: 11 KPPPRKWLSAAFSETASSATNASPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDA 70
Query: 81 K------CNTKLVSMYGSFGHVKYARSVFDSMPN---PDFYSFQVMIRWYFLNDLYKDIV 131
T+LV MY + A +VF S+P + +IR + + ++ V
Sbjct: 71 AGPGPAALQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAV 130
Query: 132 EFYKCM--RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVD 188
FY M D V+K+C L + G VH +G D +V + L+
Sbjct: 131 LFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIK 190
Query: 189 MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT 248
MYA + +R+VFD +++ V W M+ GYV+ + LF MR + N T
Sbjct: 191 MYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFAT 250
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L ++ CA L G LH +K G+E + L+ MY KC + +A +F +
Sbjct: 251 LACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMP 310
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
DLV+W MI G Q+G D AL+LF D + + P+ VT+AS+L A +L G+
Sbjct: 311 RDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKE 370
Query: 369 VHSLGIR-LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------ 421
+H +R D +++ALVD+Y KC + A+ +F+ T DV+ +++ISG
Sbjct: 371 IHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRM 430
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
L + P+AV + S + ACAS+ A+++G LH Y K YV +
Sbjct: 431 SEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNA-YEGRCYVES 489
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
AL++ Y+KCG + +F M K+ VTW++MI + G+ +L LF M+ E V+
Sbjct: 490 ALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKY 549
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
N V ++ILSAC+ + G K + + + ++D+ + G LE AL
Sbjct: 550 NNVTISSILSACAGLPAIYYG-KEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRV 608
Query: 591 MENMPIEPDVS 601
E+MP + +VS
Sbjct: 609 FEHMPEKNEVS 619
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 183/425 (43%), Gaps = 60/425 (14%)
Query: 283 LVTALLDMYVKCGNIRDARSVFDEL---CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
L T L+ MYV RDA +VF L + + W +I G+T +G+ A+ LF K
Sbjct: 78 LQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAV-LFYVKM 136
Query: 340 WA---DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
WA P+ T+ V+ + A LG L++GR+VH LGL+ D V +AL+ MYA
Sbjct: 137 WAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAG 196
Query: 396 VIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVIS 438
++ AR +F+ E+D + WN ++ G P+ TL +S
Sbjct: 197 LLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLS 256
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
CA+ + G LH + K G L V V L++ YAKC + A +F M + V
Sbjct: 257 VCAAEADLLSGVQLHTLAVKYG-LEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLV 315
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC---- 554
TW+ MI G G +L LF DM +QP+ V ++L A + +G +
Sbjct: 316 TWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYI 375
Query: 555 -----------------FYSMCRDFKFVPSMKHYVCMVDLLARA--------GRLEEA-- 587
Y CRD + ++ +D++ + R+ EA
Sbjct: 376 VRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAV 435
Query: 588 --LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYY-VLVSNLY 644
++ + I+P+ + + L C + +G+ + +L+ + CY + ++Y
Sbjct: 436 KMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMY 495
Query: 645 ASDGR 649
+ GR
Sbjct: 496 SKCGR 500
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 31/294 (10%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT------VINALVDMYAKCHVIA 398
P + ++L +L +G +H+ + GL D + LV MY
Sbjct: 34 PCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFR 93
Query: 399 DARYIFETTSEKDV---IAWNSIISGL-------------------DDNVSPDAVTLVSV 436
DA +F + + WN +I G + PD TL V
Sbjct: 94 DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPYV 153
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ +CA+LGA+ +G +H + G L ++YVG+AL+ YA G AR VFD M E++
Sbjct: 154 VKSCAALGALHLGRLVHRTTRALG-LDRDMYVGSALIKMYADAGLLDGAREVFDGMDERD 212
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V W+ M+ GY GD ++ LF M PN LS C+ + G + +
Sbjct: 213 CVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQ-LH 271
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
++ + P + +V + A+ LEEA MP + D+ + + GC
Sbjct: 272 TLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRD-DLVTWNGMISGC 324
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 216/638 (33%), Positives = 335/638 (52%), Gaps = 28/638 (4%)
Query: 66 KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+A HA ++V G ++ + L+++Y H A VFDS+ N D S+ +I +
Sbjct: 30 RALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQQ 89
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFV-----FSKVLKACCELRDIDEGMKVHCEIVKVG-GP 178
+ + R+ + H V + V A L D G + H VK
Sbjct: 90 QAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSH 149
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D F + L++MY K + +R +FDE ++N VSW +MI+GY + A E LF MR
Sbjct: 150 DVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMR 209
Query: 239 --EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
E N+ S+++A ++ G+ +H +K G+ + AL+ MYVKCG+
Sbjct: 210 HEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVTMYVKCGS 269
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ DA F+ + + ++W+AM+ G+ Q G DKALKLF D + P+ T+ V++A
Sbjct: 270 LEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINA 329
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ + GR +H ++LG E V++ALVDMYAKC I DAR FE + DV+ W
Sbjct: 330 CSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLW 389
Query: 416 NSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
SII+G N V P+ +T+ SV+ AC++L A+ G +HA K
Sbjct: 390 TSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIK 449
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
S + +G+AL YAKCG +F M ++ ++W+AMI G G G L
Sbjct: 450 YNF-SLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLE 508
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF M E +P+ V F +LSACSH G+V GW F M +F P+++HY CMVD+L
Sbjct: 509 LFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDIL 568
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
+RAG+L EA EF+E+ ++ + L+ L + +DLG +K++EL ++ YV
Sbjct: 569 SRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYV 628
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L+S++Y + G+W V +VR +MK RG++K PGCS ++L
Sbjct: 629 LLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIEL 666
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 201/430 (46%), Gaps = 49/430 (11%)
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C + + L +G+ LH IL G ++ + +L+++Y KC + A VFD + + D+VSW
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 316 TAMIVGYTQSGYPDKAL---KLFTDKKWAD--FFPNHVTIASVLSASAQLGNLNMGRMVH 370
+I ++Q +L LF A PN T+ V +A++ L + GR H
Sbjct: 80 NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139
Query: 371 SLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------- 422
+L ++ D ++L++MY K ++ +AR +F+ E++ ++W ++ISG
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELAD 199
Query: 423 ------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
+ + + SV+SA V G +H+ + K GL+ V V
Sbjct: 200 EAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCI-VSVAN 258
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
AL+ Y KCG + A F+ KN++TWSAM+ G+ GD +L LF DM P
Sbjct: 259 ALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELP 318
Query: 531 NEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEA 587
+E +++ACS + EG + YS+ K ++ YV +VD+ A+ G + +A
Sbjct: 319 SEFTLVGVINACSDACAIVEGRQMHGYSL----KLGYELQLYVLSALVDMYAKCGSIVDA 374
Query: 588 LEFMENMPIEPDVSLFGAFLHG----------CGLYSRFDLGEVMIKKMLELHPDKACYY 637
+ E + +PDV L+ + + G LY + LG V+ + KAC
Sbjct: 375 RKGFECIQ-QPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKAC-- 431
Query: 638 VLVSNLYASD 647
SNL A D
Sbjct: 432 ---SNLAALD 438
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/548 (35%), Positives = 318/548 (58%), Gaps = 21/548 (3%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDET 206
++ K+L+ C E D+ +G +H I++ G + L T L+ Y K + ++R+VFD
Sbjct: 39 LYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRM 98
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++NVVSWT+ I+GY +N Q+ L++F++M V NQ T GS++ AC LR L +G
Sbjct: 99 PERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGM 158
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG I K N + +AL+D++ KCGN+ DAR +F+ + D+VSW A+I GY
Sbjct: 159 QIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQD 218
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN- 385
+ D + ++F P+ T+ SVL AS++ NL +H + I+LG + +N
Sbjct: 219 FNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNG 278
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS------------------ 427
+L+D YAK + A ++++ +KDVI++ +I++G S
Sbjct: 279 SLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFME 338
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
D VT ++++ CA + ++ +G +HA + K S +V G AL++ YAK G+ + A
Sbjct: 339 IDDVTFCTMLNVCADIASLSIGRQIHALAIKYKP-SYDVATGNALVDMYAKSGEIEDATR 397
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F M+EKN ++W+++I GYG G G ++AL+ M E ++PN++ F ++L ACSH+G+
Sbjct: 398 AFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGL 457
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
GEGW+CF +M + +P +HY CM+DL AR G+LEEA + M I+P+ SL+GA L
Sbjct: 458 TGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAIL 517
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C +Y LGEV +L + P+ + YV+++ +YA+ G W + ++R LM+ R L K
Sbjct: 518 GACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKK 577
Query: 668 SPGCSLVD 675
PG S++
Sbjct: 578 IPGYSIIQ 585
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 160/561 (28%), Positives = 276/561 (49%), Gaps = 43/561 (7%)
Query: 14 TKKPKLQLRFFSYTNQQ---TPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKA--- 67
TKK + L F++ Q+ +P + EL +S + + +L LC T LK
Sbjct: 6 TKKFRYNLLQFTFLKQRFHHSPCEPELTHLSSSLY-------MKILQLCIETEDLKQGCL 58
Query: 68 FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H+ +I +G +N +TKL+ Y FG AR VFD MP + S+ I Y N
Sbjct: 59 IHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQISGYAKNGH 118
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK---VGGPDSFVL 183
Y+D + + M + + F + VL+AC LR ++ GM++H I K +G + FV
Sbjct: 119 YQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQKNRFIG--NLFVQ 176
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ LVD+++KC ++ +R +F+ +++VVSW ++I GY D + +F M V
Sbjct: 177 SALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYSMMGEGVT 236
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ TLGS++ A ++ L + +HG I+++G + L +L+D Y K ++ A ++
Sbjct: 237 PDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASAL 296
Query: 304 FDELCSIDLVSWTAMIVGYTQS-GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+ + D++S+TA++ GY + Y +AL LF D + + VT ++L+ A + +
Sbjct: 297 YKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIAS 356
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L++GR +H+L I+ D NALVDMYAK I DA F EK+VI+W S+I+G
Sbjct: 357 LSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITG 416
Query: 422 LD-----------------DNVSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLS 463
+ + P+ +T +S++ AC+ G G + TK +L
Sbjct: 417 YGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILP 476
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDG--GGSLALF 520
+ + +++ +A+ G + A + M K N+ W A++G + G G A
Sbjct: 477 RAEHY-SCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYGHMSLGEVAATH 535
Query: 521 SDMLNEEVQPNEVIFTTILSA 541
++ E N V+ I +A
Sbjct: 536 LLRMDPENSANYVVLAGIYAA 556
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/641 (34%), Positives = 361/641 (56%), Gaps = 32/641 (4%)
Query: 66 KAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYF 122
K H L+ GL D NT L+S+Y G + AR +F+ M N D S+ M+ +
Sbjct: 46 KLVHRKLMQSGLELDSVVLNT-LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFA 104
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV 182
N + + + M + + + F+ V++AC G ++ +VK G ++ V
Sbjct: 105 NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV 164
Query: 183 LTG--LVDMYAK-CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR- 238
G L+DM+ K D+GS+ +VFD+ ++N+V+WT MI + Q CA++ + LF M
Sbjct: 165 CVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMEL 224
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC---G 295
G+V ++ T S+++AC +L L GK LH ++++G+ ++ + +L+DMY KC G
Sbjct: 225 SGYVP-DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADG 283
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK-ALKLFTDKKWADFFPNHVTIASVL 354
++ D+R VF+++ +++SWTA+I Y QSG DK A++LF PNH + +SVL
Sbjct: 284 SVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVL 343
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVI 413
A L + G V+S ++LG+ + N+L+ MYA+ + DAR F+ EK+++
Sbjct: 344 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 403
Query: 414 AWNSIISGLDDNVSPD-----------------AVTLVSVISACASLGAVQVGSSLHAYS 456
++N+I+ G N+ + A T S++S AS+GA+ G +H
Sbjct: 404 SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 463
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K G SN + AL++ Y++CG+ ++A VF+ M ++N ++W++MI G+ G +
Sbjct: 464 LKGGY-KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 522
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
L +F ML +PNE+ + +LSACSH GM+ EG K F SM ++ VP M+HY CMVD
Sbjct: 523 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVD 582
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
LL R+G L EA+EF+ +MP+ D ++ L C ++ +LG + +LE PD
Sbjct: 583 LLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAA 642
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
Y+L+SNL+AS G+W V ++R+ MK+R L K GCS ++++
Sbjct: 643 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVE 683
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 191/366 (52%), Gaps = 29/366 (7%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T L+ +C + R GK +H +++ G+E++S ++ L+ +Y KCG+ AR +F+ +
Sbjct: 28 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 87
Query: 308 CSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ DLVSW+AM+ + + +A+ F D F+PN A+V+ A + +G
Sbjct: 88 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 147
Query: 367 RMVHSLGIRLG-LE-DYTVINALVDMYAK-CHVIADARYIFETTSEKDVIAWNSIISG-- 421
+++ ++ G LE D V L+DM+ K + A +F+ E++++ W +I+
Sbjct: 148 EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 207
Query: 422 ------------LDDNVS---PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
LD +S PD T SV+SAC LG + +G LH+ + G L+ +V
Sbjct: 208 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG-LALDV 266
Query: 467 YVGTALLNFYAKC---GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD-GGGSLALFSD 522
VG +L++ YAKC G +R VF+ M E N ++W+A+I Y G+ ++ LF
Sbjct: 267 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 326
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVDLLARA 581
M++ ++PN F+++L AC + G + + Y++ V + + ++ + AR+
Sbjct: 327 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN--SLISMYARS 384
Query: 582 GRLEEA 587
GR+E+A
Sbjct: 385 GRMEDA 390
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 24/274 (8%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P+ T + +L + + N +G++VH ++ GLE D V+N L+ +Y+KC AR I
Sbjct: 24 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 83
Query: 404 FETTSEK-DVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGA 445
FE K D+++W++++S +N P+ +VI AC++
Sbjct: 84 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 143
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK-CGDAQSARMVFDAMREKNTVTWSAMI 504
VG ++ + K G L ++V VG L++ + K GD SA VFD M E+N VTW+ MI
Sbjct: 144 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 203
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
+ G ++ LF DM P+ ++++LSAC+ G++ G K +S
Sbjct: 204 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG-KQLHSRVIRLGL 262
Query: 565 VPSMKHYVCMVDLLARA---GRLEEALEFMENMP 595
+ +VD+ A+ G ++++ + E MP
Sbjct: 263 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 296
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
N PD T ++ +C Q+G +H + GL +V + T L++ Y+KCGD ++
Sbjct: 21 NAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT-LISLYSKCGDTET 79
Query: 485 ARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR++F+ M +++ V+WSAM+ + ++ F DML PNE F ++ ACS
Sbjct: 80 ARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACS 139
Query: 544 HT--GMVGE 550
+ VGE
Sbjct: 140 NANYAWVGE 148
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/614 (34%), Positives = 349/614 (56%), Gaps = 30/614 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL---- 141
++M+ FG++ A VF M + +S+ V++ Y + + + C+ R+
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAM----CLYHRMLWVG 190
Query: 142 -KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSS 199
+ D + F VL+ C + D+ G +VH +V+ G D V+ L+ MY KC D+ S+
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R +FD ++++SW +MI+GY +N EGL LF MR V+ + +TL S+++AC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
G+ +H Y++ G ++ + +L MY+ G+ R+A +F + D+VSWT MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY + PDKA+ + P+ +T+A+VLSA A LG+L+ G +H L I+ L
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y ++ N L++MY+KC I A IF K+VI+W SII+GL N
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P+A+TL + ++ACA +GA+ G +HA+ + G + + ++ ALL+ Y +CG
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG-VGLDDFLPNALLDMYVRCGRM 549
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+A F++ ++K+ +W+ ++ GY +G G + LF M+ V+P+E+ F ++L C
Sbjct: 550 NTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S + MV +G F M D+ P++KHY C+VDLL RAG L+EA +F++ MP+ PD ++
Sbjct: 609 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L+ C ++ + DLGE+ + + EL YY+L+ NLYA G+W V +VR +MK+
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 663 RGLSKSPGCSLVDL 676
GL+ GCS V++
Sbjct: 728 NGLTVDAGCSWVEV 741
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 212/435 (48%), Gaps = 23/435 (5%)
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
+ G N +E + L N M+E V ++ +LV C RA +G ++ L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
+ L A L M+V+ GN+ DA VF ++ +L SW ++ GY + GY D+A+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 338 KKW-ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
W P+ T VL + +L G+ VH +R G E D V+NAL+ MY KC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVIS 438
+ AR +F+ +D+I+WN++ISG +N V PD +TL SVIS
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
AC LG ++G +HAY G + ++ V +L Y G + A +F M K+ V
Sbjct: 306 ACELLGDRRLGRDIHAYVITTG-FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
+W+ MI GY ++ + M + V+P+E+ +LSAC+ G + G + + +
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKL 423
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
+ + + ++++ ++ +++AL+ N+P + +S + + + G L +R
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLNNRCFE 482
Query: 619 GEVMIKKM-LELHPD 632
+ +++M + L P+
Sbjct: 483 ALIFLRQMKMTLQPN 497
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 204/630 (32%), Positives = 339/630 (53%), Gaps = 22/630 (3%)
Query: 68 FHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H ++ G D T L+ Y G+++ AR VFD + ++ +I Y
Sbjct: 151 LHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGR 210
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTG 185
+E + MR+ D +V S VL AC L ++ G ++H +++ G D V+
Sbjct: 211 SAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNV 270
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+D Y KC + + R++FD+ + KN++SWT+MI+GY+QN E + LF M + +
Sbjct: 271 LIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPD 330
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
S++T+C AL QG+ +H Y +K +E + + L+DMY K + DA+ VFD
Sbjct: 331 GFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFD 390
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ +++S+ AMI GY+ +AL+LF + + F P+ +T S+L SA L L +
Sbjct: 391 VMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALEL 450
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
+ +H L I+ G+ D +AL+D+Y+KC + DAR++FE +EKD++ WN++ G
Sbjct: 451 SKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQ 510
Query: 425 NVS-----------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
++ P+ T ++I+A ++L +++ G H K GL +
Sbjct: 511 HLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGL-DFCPF 569
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V AL++ YAKCG + AR +F++ ++ V W++MI + G+ +L +F +M+ E
Sbjct: 570 VTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEG 629
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+QPN V F +LSACSH G V +G F SM F P +HY C+V LL R+G+L EA
Sbjct: 630 IQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEA 688
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
EF+E MPIEP ++ + L C + +LG+ + + P + Y+L+SN++AS
Sbjct: 689 KEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASK 748
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
G W V +VR+ M + K PG S ++++
Sbjct: 749 GMWADVKKVRDRMDSSEVVKEPGRSWIEVN 778
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 185/615 (30%), Positives = 328/615 (53%), Gaps = 31/615 (5%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
NLL L S + K H +IV GL +D L+++ V AR VFD MP+
Sbjct: 32 NLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHK 91
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN-FVFSKVLKACCELRDIDEGMKV 168
+ ++ M+ Y ++ + + ++++ EH N FV + V++AC +L +++G ++
Sbjct: 92 NLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQL 151
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +V+ G D +V T L+D Y+K +I +R VFD+ +K V+WT++IAGY + +
Sbjct: 152 HGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRS 211
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
L LF +MRE V ++ + S+++AC+ L L GK +H Y+L+ G E++ +V L
Sbjct: 212 AVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVL 271
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+D Y KC ++ R +FD++ +++SWT MI GY Q+ + +A+KLF + + P+
Sbjct: 272 IDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDG 331
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
SVL++ L GR VH+ I+ LE D V N L+DMYAK +++ DA+ +F+
Sbjct: 332 FACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDV 391
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+E++VI++N++I G P +T VS++ ASL A+++
Sbjct: 392 MAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELS 451
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H K G +S +++ G+AL++ Y+KC + AR VF+ M EK+ V W+AM GY
Sbjct: 452 KQIHGLIIKFG-VSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQ 510
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR-DFKFVPSM 568
+ +L L+S + +PNE F +++A S+ + G + + + F P +
Sbjct: 511 HLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFV 570
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+ +VD+ A+ G +EEA + M N I DV + + + + + M ++M++
Sbjct: 571 TN--ALVDMYAKCGSIEEARK-MFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMK 627
Query: 629 --LHPDKACYYVLVS 641
+ P+ + ++S
Sbjct: 628 EGIQPNYVTFVAVLS 642
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 147/473 (31%), Positives = 246/473 (52%), Gaps = 32/473 (6%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA ++ G D L+ Y VK R +FD M + S+ MI Y N
Sbjct: 250 KQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQN 309
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+ ++ + M + + D F + VL +C +++G +VH +K D FV
Sbjct: 310 SFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVK 369
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
GL+DMYAK + +++VFD ++NV+S+ +MI GY + E L LF+ MR
Sbjct: 370 NGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFP 429
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ +T SL+ A L AL K +HG I+K G+ ++ +AL+D+Y KC ++DAR V
Sbjct: 430 PSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHV 489
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+E+ D+V W AM GYTQ ++ALKL++ +++ PN T A++++A++ L +L
Sbjct: 490 FEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASL 549
Query: 364 NMGRMVHSLGIRLGLEDYT--VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
G+ H+ +++GL D+ V NALVDMYAKC I +AR +F ++ +DV+ WNS+IS
Sbjct: 550 RHGQQFHNQLVKMGL-DFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIST 608
Query: 422 -----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ + + P+ VT V+V+SAC+ G V+ G L+ +++ G
Sbjct: 609 HAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDG--LNHFNSMPGF--- 663
Query: 465 NVYVGTA----LLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ GT +++ + G A+ + M E + W +++ + G+
Sbjct: 664 GIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGN 716
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/641 (34%), Positives = 361/641 (56%), Gaps = 32/641 (4%)
Query: 66 KAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYF 122
K H L+ GL D NT L+S+Y G + AR +F+ M N D S+ M+ +
Sbjct: 64 KLVHRKLMQSGLELDSVVLNT-LISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFA 122
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV 182
N + + + M + + + F+ V++AC G ++ +VK G ++ V
Sbjct: 123 NNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADV 182
Query: 183 LTG--LVDMYAK-CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR- 238
G L+DM+ K D+GS+ +VFD+ ++N+V+WT MI + Q CA++ + LF M
Sbjct: 183 CVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMEL 242
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC---G 295
G+V ++ T S+++AC +L L GK LH ++++G+ ++ + +L+DMY KC G
Sbjct: 243 SGYVP-DRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADG 301
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK-ALKLFTDKKWADFFPNHVTIASVL 354
++ D+R VF+++ +++SWTA+I Y QSG DK A++LF PNH + +SVL
Sbjct: 302 SVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVL 361
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVI 413
A L + G V+S ++LG+ + N+L+ MYA+ + DAR F+ EK+++
Sbjct: 362 KACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLV 421
Query: 414 AWNSIISGLDDNVSPD-----------------AVTLVSVISACASLGAVQVGSSLHAYS 456
++N+I+ G N+ + A T S++S AS+GA+ G +H
Sbjct: 422 SYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRL 481
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K G SN + AL++ Y++CG+ ++A VF+ M ++N ++W++MI G+ G +
Sbjct: 482 LKGGY-KSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRA 540
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
L +F ML +PNE+ + +LSACSH GM+ EG K F SM ++ VP M+HY CMVD
Sbjct: 541 LEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVD 600
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
LL R+G L EA+EF+ +MP+ D ++ L C ++ +LG + +LE PD
Sbjct: 601 LLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAA 660
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
Y+L+SNL+AS G+W V ++R+ MK+R L K GCS ++++
Sbjct: 661 YILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVE 701
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 191/366 (52%), Gaps = 29/366 (7%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T L+ +C + R GK +H +++ G+E++S ++ L+ +Y KCG+ AR +F+ +
Sbjct: 46 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 105
Query: 308 CSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ DLVSW+AM+ + + +A+ F D F+PN A+V+ A + +G
Sbjct: 106 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVG 165
Query: 367 RMVHSLGIRLG-LE-DYTVINALVDMYAK-CHVIADARYIFETTSEKDVIAWNSIISG-- 421
+++ ++ G LE D V L+DM+ K + A +F+ E++++ W +I+
Sbjct: 166 EIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFA 225
Query: 422 ------------LDDNVS---PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
LD +S PD T SV+SAC LG + +G LH+ + G L+ +V
Sbjct: 226 QLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG-LALDV 284
Query: 467 YVGTALLNFYAKC---GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD-GGGSLALFSD 522
VG +L++ YAKC G +R VF+ M E N ++W+A+I Y G+ ++ LF
Sbjct: 285 CVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCK 344
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVDLLARA 581
M++ ++PN F+++L AC + G + + Y++ V + + ++ + AR+
Sbjct: 345 MISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN--SLISMYARS 402
Query: 582 GRLEEA 587
GR+E+A
Sbjct: 403 GRMEDA 408
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 24/274 (8%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P+ T + +L + + N +G++VH ++ GLE D V+N L+ +Y+KC AR I
Sbjct: 42 PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLI 101
Query: 404 FETTSEK-DVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGA 445
FE K D+++W++++S +N P+ +VI AC++
Sbjct: 102 FEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANY 161
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK-CGDAQSARMVFDAMREKNTVTWSAMI 504
VG ++ + K G L ++V VG L++ + K GD SA VFD M E+N VTW+ MI
Sbjct: 162 AWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMI 221
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
+ G ++ LF DM P+ ++++LSAC+ G++ G K +S
Sbjct: 222 TRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALG-KQLHSRVIRLGL 280
Query: 565 VPSMKHYVCMVDLLARA---GRLEEALEFMENMP 595
+ +VD+ A+ G ++++ + E MP
Sbjct: 281 ALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMP 314
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
N PD T ++ +C Q+G +H + GL +V + T L++ Y+KCGD ++
Sbjct: 39 NAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNT-LISLYSKCGDTET 97
Query: 485 ARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR++F+ M +++ V+WSAM+ + ++ F DML PNE F ++ ACS
Sbjct: 98 ARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACS 157
Query: 544 HT--GMVGE 550
+ VGE
Sbjct: 158 NANYAWVGE 166
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/591 (35%), Positives = 326/591 (55%), Gaps = 58/591 (9%)
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYA--KCRD 195
K L+ H + +L C +++ + +H +I+K G ++ F L+ L++ A +
Sbjct: 28 KLLQNHPSLT---LLSTCKSFQNLKQ---IHSQIIKTGLHNTQFALSKLIEFCAISPFGN 81
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+ + +F+ N W +MI G + + + RM VE N T L+ +
Sbjct: 82 LSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKS 141
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN------------------- 296
CAK+ A +GK +HG++LK+G+E + + T+L++MY + G
Sbjct: 142 CAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSF 201
Query: 297 ------------IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+ DAR +F+E+ D VSW AMI GY QSG ++AL F + K A+
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYI 403
PN T+ +VLSA AQ G+L +G V S GL + ++NAL+DMY+KC + AR +
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDL 321
Query: 404 FETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV 446
FE EKD+I+WN +I G NV P+ VT VS++ ACA LGA+
Sbjct: 322 FEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGAL 381
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+G +HAY K+ L +N + T+L++ YAKCG+ ++A+ VF M+ K+ +W+AMI G
Sbjct: 382 DLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISG 441
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
M G +L LF M +E +P+++ F +LSACSH G+V G +CF SM D+ P
Sbjct: 442 LAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISP 501
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++HY CM+DLL RAG +EA M+NM ++PD +++G+ L C ++ +LGE K +
Sbjct: 502 KLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHL 561
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
EL P+ YVL+SN+YA+ GRW V ++R + +G+ K PGCS +++D
Sbjct: 562 FELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVD 612
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 181/614 (29%), Positives = 294/614 (47%), Gaps = 100/614 (16%)
Query: 32 PTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSM- 89
PT H + + L + P L LL CKS +LK H+ +I GL N + +KL+
Sbjct: 15 PTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFC 74
Query: 90 -YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
FG++ YA +F+S+ P+ + + MIR L+ ++FY M E +++
Sbjct: 75 AISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYT 134
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG---------- 197
F +LK+C ++ EG ++H ++K+G D FV T L++MYA+ ++G
Sbjct: 135 FPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSS 194
Query: 198 ---------------------SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
+R++F+E ++ VSW +MIAGY Q+ +E L F
Sbjct: 195 LRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQE 254
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M+ V N+ T+ ++++ACA+ +L G W+ +I G+ N LV AL+DMY KCG+
Sbjct: 255 MKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGD 314
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ AR +F+ +C D++SW MI GY+ +AL LF + ++ PN VT S+L A
Sbjct: 315 LDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPA 374
Query: 357 SAQLGNLNMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A LG L++G+ +H+ + LGL + ++ +L+DMYAKC I A+ +F K + +
Sbjct: 375 CAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS 434
Query: 415 WNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
WN++ISGL D+ PD +T V V+SAC+ G V++G
Sbjct: 435 WNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG-------- 486
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
R F +M E + S + YG D G
Sbjct: 487 ----------------------------RQCFSSMVEDYDI--SPKLQHYGCMIDLLGRA 516
Query: 518 ALFSD----MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK-HYV 572
LF + M N E++P+ I+ ++L AC G V G ++ F+ P YV
Sbjct: 517 GLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELG---EFAAKHLFELEPENPGAYV 573
Query: 573 CMVDLLARAGRLEE 586
+ ++ A AGR ++
Sbjct: 574 LLSNIYATAGRWDD 587
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 226/490 (46%), Gaps = 38/490 (7%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L++ Y G + AR +F+ +P D S+ MI Y + +++ + F++ M++
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
+ VL AC + ++ G V I G G + ++ L+DMY+KC D+ +R +
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDL 321
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ +K+++SW MI GY + +E L LF +M++ VE N +T S++ ACA L AL
Sbjct: 322 FEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGAL 381
Query: 263 HQGKWLHGYILK--IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
GKW+H YI K +G+ N+ L T+L+DMY KCGNI A+ VF + L SW AMI
Sbjct: 382 DLGKWIHAYIDKKFLGL-TNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMIS 440
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIR 375
G G+ + AL+LF + F P+ +T VLSA + G + +GR MV I
Sbjct: 441 GLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDIS 500
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVS 435
L+ Y ++D+ + + +A + + K PD S
Sbjct: 501 PKLQHY---GCMIDLLGRAGLFDEAEALMKNMEMK-----------------PDGAIWGS 540
Query: 436 VISACASLGAVQVG--SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
++ AC G V++G ++ H + L N L N YA G + +
Sbjct: 541 LLGACRVHGNVELGEFAAKHLFE----LEPENPGAYVLLSNIYATAGRWDDVARIRTKLN 596
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+K + G ++ D L D ++E+ Q + I G V + +
Sbjct: 597 DKGM---KKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSE 653
Query: 554 CFYSMCRDFK 563
Y M ++K
Sbjct: 654 VLYDMDEEWK 663
>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
Length = 703
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/600 (35%), Positives = 327/600 (54%), Gaps = 27/600 (4%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
AR +FD P+P ++R + ++ + +R RL D F FS +L+AC
Sbjct: 53 ARDLFDEFPSPTPRLANALLRAHIRARQWRAAILLGPRLRVRL---DGFTFSLLLRACAA 109
Query: 159 LRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
L + G VH ++ D+FV T +V MYA+C D+ + + ++V TS
Sbjct: 110 LPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKPDIVLRTS 169
Query: 217 MIAGYVQNDCAQEGLVLFNRMREG-FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
++ GY QN A+E L F R G V +TL S ++A A+L + +G+ H Y+++
Sbjct: 170 VVTGYEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRN 229
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
+ + LV +L YVK G+ + + +F+ + D+++W+ MI GY Q G + L+++
Sbjct: 230 SLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMY 289
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
+ A PN VT+ SVL A A + + G+ VH + + +G E + V ALVDMY KC
Sbjct: 290 REMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATALVDMYMKC 349
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSV 436
+A +F +KDV+AW ++I GL DD+V PDA+T+V V
Sbjct: 350 SCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHV-PDAITMVKV 408
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
++AC+ G ++ LH Y + G ++N +V ALL+ Y+KCGD SA VF+ EK+
Sbjct: 409 LAACSEFGGTRLAICLHGYLVRNGF-NNNAFVAAALLDLYSKCGDIDSAVRVFEGTTEKD 467
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V W +MI GYG G G ++AL+ M+ +QPN V F ++LSACSH+G+V EG + F
Sbjct: 468 IVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFD 527
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
SM + F VP+ +H MVDLL RAG L+EA+ F+ M + A L C ++
Sbjct: 528 SMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLAACREHNNT 587
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +V K +L+L PD YY L++N+YA D +W V R++++ R L K PG S V++
Sbjct: 588 KMSKVAAKSLLKLDPDHVGYYNLLTNIYAYDEKWESVKDTRDMVRGRDLRKVPGYSSVEV 647
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 237/480 (49%), Gaps = 30/480 (6%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNP 109
LL C + SL +A HA+ I ++ T +V MY G + A + + + P
Sbjct: 103 LLRACAALPSLAHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKP 162
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH---DNFVFSKVLKACCELRDIDEGM 166
D ++ Y N + ++ +EF+ R + + + A +L + +G
Sbjct: 163 DIVLRTSVVTGYEQNGMAEEALEFFA--RNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQ 220
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
H +V+ G D ++ ++ Y K D +S ++F+ D++V++W+ MI GYVQ+
Sbjct: 221 ACHAYVVRNSLGYDLALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHG 280
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A EGL ++ M + V+ N +TL S++ ACA + +GK +H + IG E+ + T
Sbjct: 281 DAHEGLRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVAT 340
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY+KC +A +F + D+V+W A+I G TQ+ P ++L +F D P
Sbjct: 341 ALVDMYMKCSCHEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVP 400
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIF 404
+ +T+ VL+A ++ G + +H +R G + V AL+D+Y+KC I A +F
Sbjct: 401 DAITMVKVLAACSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVF 460
Query: 405 ETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQ 447
E T+EKD++ W S+I+G + ++ P++VT VSV+SAC+ G VQ
Sbjct: 461 EGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQ 520
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGG 506
G + T+ + N +A+++ + G+ Q A M + TW A++
Sbjct: 521 EGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLAA 580
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 169/363 (46%), Gaps = 31/363 (8%)
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
LH +L+ G+ +SH +TA + + G RD +FDE S A++ + ++
Sbjct: 24 LHANLLRSGLLHSSHHLTAHVLAWYPPGLARD---LFDEFPSPTPRLANALLRAHIRARQ 80
Query: 328 PDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR--LGLEDYTVI 384
A+ L + D F T + +L A A L +L GR VH++ IR ED V
Sbjct: 81 WRAAILLGPRLRVRLDGF----TFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVA 136
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------------V 426
A+V MYA+C + A + + D++ S+++G + N V
Sbjct: 137 TAIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGV 196
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
VTLVS +SA A LG V+ G + HAY + L V T +L+FY K GD Q++
Sbjct: 197 MLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGYDLALVNT-VLSFYVKIGDFQASM 255
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F+ M +++ +TWS MI GY GD L ++ +M+ VQPN V ++L AC+
Sbjct: 256 RLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYREMVKARVQPNSVTLVSVLQACALVV 315
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
EG K + + + +VD+ + EEA+ MP + DV + A
Sbjct: 316 DAEEG-KRVHRVAVSIGCELEVGVATALVDMYMKCSCHEEAMCLFHRMP-KKDVVAWAAV 373
Query: 607 LHG 609
+ G
Sbjct: 374 IGG 376
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/655 (33%), Positives = 357/655 (54%), Gaps = 25/655 (3%)
Query: 55 LLGLCKSTG---SLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN-P 109
+LG+C + + H +I + D T L+ MY S A S+F + N
Sbjct: 553 VLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRS 612
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ ++ VMI + N +++ +E Y + + + F+ AC +D G +VH
Sbjct: 613 NIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVH 672
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
C+++K+ D +V T L+ MYAK + +++VFD+ LDK V +MI+ ++ N A
Sbjct: 673 CDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAY 732
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L L+N+M+ G + T+ SL++ C+ + + G+ +H ++K ++ N + +ALL
Sbjct: 733 DALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALL 792
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
MY KCG+ DA SVF + D+V+W +MI G+ Q+ AL LF + +
Sbjct: 793 TMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSD 852
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
+ SV+SA L N+ +G ++H I+ GLE D V +LVDMY+K A +F +
Sbjct: 853 VMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSM 912
Query: 408 SEKDVIAWNSIIS-----GLDD---NVSP---------DAVTLVSVISACASLGAVQVGS 450
K+++AWNS+IS GL + N+ P D+V++ +V+ A +S+ A+ G
Sbjct: 913 PNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGK 972
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+LHAY + + S++ V AL++ Y KCG + A+++F+ M +N VTW++MI GYG
Sbjct: 973 TLHAYQIRLQI-PSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSH 1031
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G+ ++ LF +M E P+EV F ++++CSH+GMV EG F M ++ P M+H
Sbjct: 1032 GNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEH 1091
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y +VDLL RAGRL++A F+ MPI+ D S++ L C + +LGE++ +L++
Sbjct: 1092 YASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKME 1151
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
P + YV + NLY W R +R MK RGL KSPGCS +++ D FS
Sbjct: 1152 PARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFS 1206
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 173/620 (27%), Positives = 305/620 (49%), Gaps = 34/620 (5%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN- 108
+LL C S +L + HA ++ GL +D T L++MY G + A VFD M
Sbjct: 446 SLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSES 505
Query: 109 ----PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
PD + +I YF +++ + + M++ D + S VL C L
Sbjct: 506 RDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMA 565
Query: 165 GMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-NVVSWTSMIAGYV 222
G ++H I++ + D ++ T L+ MY+ C + +F + ++ N+V+W MI G+V
Sbjct: 566 GRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFV 625
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
+N ++ L L++ + + + TAC+ L G+ +H ++K+ + + +
Sbjct: 626 ENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPY 685
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ T+LL MY K G++ DA+ VFD++ ++ AMI + +G AL L+ K +
Sbjct: 686 VCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGE 745
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADAR 401
+ TI+S+LS + +G+ + GR VH+ I+ ++ I +AL+ MY KC DA
Sbjct: 746 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 805
Query: 402 YIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLG 444
+F T E+DV+AW S+I+G N V D+ + SVISA L
Sbjct: 806 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 865
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
V++G +H ++ K+G L S+V+V +L++ Y+K G A+SA MVF +M KN V W++MI
Sbjct: 866 NVELGHLIHGFAIKRG-LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMI 924
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
Y G S+ L +L + V TT+L A S + +G K ++ +
Sbjct: 925 SCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG-KTLHAYQIRLQI 983
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
++ ++D+ + G L+ A ENMP ++ + + + G G + + + K
Sbjct: 984 PSDLQVENALIDMYVKCGCLKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFK 1042
Query: 625 KML--ELHPDKACYYVLVSN 642
+M E PD+ + L+++
Sbjct: 1043 EMKRSETAPDEVTFLALITS 1062
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/467 (28%), Positives = 233/467 (49%), Gaps = 30/467 (6%)
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
++V + M P + +++ Y +E + F F +LK C L
Sbjct: 399 KAVLELMNLPQVEEIKALVQ----QGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASL 454
Query: 160 RDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD---ETLDK--NVVS 213
++ G +H IV +G D ++ T L++MY KC +GS+ QVFD E+ D ++
Sbjct: 455 SNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITV 514
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W +I GY + +EGL F RM+E + + +L ++ C +L G+ +HGYI+
Sbjct: 515 WNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYII 574
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKAL 332
+ E + +L TAL+ MY C +A S+F +L + ++V+W MI G+ ++G +K+L
Sbjct: 575 RNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSL 634
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMY 391
+L++ K + + +A + L+ GR VH I++ +D V +L+ MY
Sbjct: 635 ELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMY 694
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLV 434
AK + DA+ +F+ +K+V N++IS N D+ T+
Sbjct: 695 AKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTIS 754
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
S++S C+ +G+ G ++HA K+ + SNV + +ALL Y KCG + A VF M+E
Sbjct: 755 SLLSGCSVVGSYDFGRTVHAEVIKRS-MQSNVAIQSALLTMYYKCGSTEDADSVFYTMKE 813
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
++ V W +MI G+ +L LF M E V+ + + T+++SA
Sbjct: 814 RDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA 860
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 196/447 (43%), Gaps = 39/447 (8%)
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
I VQ + L L ++ + + T SL+ CA L L+ G+ +H I+ +G+
Sbjct: 413 IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDEL-----CSIDLVSWTAMIVGYTQSGYPDKAL 332
+ + ++ T+L++MYVKCG + A VFD++ + D+ W +I GY + G+ ++ L
Sbjct: 473 QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMY 391
F + P+ +++ VL +L GR +H IR E D + AL+ MY
Sbjct: 533 AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 592
Query: 392 AKCHVIADARYIF-ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTL 433
+ C +A +F + + +++AWN +I G ++N + +
Sbjct: 593 SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 652
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+AC+ + G +H K + YV T+LL YAK G + A+ VFD +
Sbjct: 653 TGAFTACSHGEVLDFGRQVHCDVIKMN-FQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVL 711
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+K +AMI + G +L L++ M E + +++LS CS G G
Sbjct: 712 DKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRT 771
Query: 554 CFYSMCRDFKFVPSMKHYV----CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+ + SM+ V ++ + + G E+A M E DV +G+ + G
Sbjct: 772 VHAEVIKR-----SMQSNVAIQSALLTMYYKCGSTEDADSVFYTMK-ERDVVAWGSMIAG 825
Query: 610 CGLYSRF----DLGEVMIKKMLELHPD 632
RF DL M K+ ++ D
Sbjct: 826 FCQNRRFKDALDLFRAMEKEGVKADSD 852
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/620 (33%), Positives = 344/620 (55%), Gaps = 23/620 (3%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
+D T+L + S ++ AR VFD +P P + +MIR Y + ++ + Y M
Sbjct: 40 SDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHML 99
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+ NF F +LKAC L+ + G +H +G D +V T L+ MYAKC +
Sbjct: 100 QLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLY 159
Query: 198 SSRQVFDET--LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
++ +F+ D+++V+W +MIA + + + + +M++ V N TL S++
Sbjct: 160 QAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPT 219
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
+ ALHQGK +H Y ++ N L TALLDMY KC + AR +F+ + + V W
Sbjct: 220 IGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCW 279
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+AMI GY AL L+ D P T+A++L A AQL +L G+ +H I
Sbjct: 280 SAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMI 339
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------- 425
+ G++ D TV N+L+ MYAKC ++ +A + KD +++++IISG N
Sbjct: 340 KSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALL 399
Query: 426 ---------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
++P T+++++ AC+ L A+Q G+ H Y+ +G +++ + A+++ Y
Sbjct: 400 IFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGF-TNDTSICNAIIDMY 458
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+KCG +R +FD M+ ++ ++W+ MI GYG+ G +L+LF ++ ++P++V
Sbjct: 459 SKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLI 518
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+LSACSH+G+V EG F SM ++F P M HY+CMVDLLARAG L+EA F++ MP
Sbjct: 519 AVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPF 578
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
P+V ++GA L C + ++GE + KK+ L P+ +VL+SN+Y+S GRW +
Sbjct: 579 VPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYI 638
Query: 657 RELMKQRGLSKSPGCSLVDL 676
R + + G KSPGCS V++
Sbjct: 639 RSIQRHHGYKKSPGCSWVEI 658
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/631 (34%), Positives = 359/631 (56%), Gaps = 22/631 (3%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K+ H ++ G + D L++ Y FG ++ A +FD MP + SF + + + +
Sbjct: 23 KSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRS 82
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
++ + + E + FVF+ +LK + D + VH + K+G D+FV
Sbjct: 83 HQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVG 142
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L+D Y+ C ++ ++RQVFD K++VSWT M+A Y +N C ++ L+LF +MR
Sbjct: 143 TALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYR 202
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N T+ + + +C L A GK +HG LK+ + + ++ ALL++Y K G I +A+
Sbjct: 203 PNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQF 262
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGN 362
F+E+ DL+ W+ MI Y QS +AL+LF + + PN+ T ASVL A A L
Sbjct: 263 FEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACASLVL 322
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
LN+G +HS +++GL+ + V NAL+D+YAKC I ++ +F ++EK+ +AWN+II G
Sbjct: 323 LNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVG 382
Query: 422 -----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
L ++ P VT SV+ A ASL A++ G +H+ + K + +
Sbjct: 383 YVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKT-MYNK 441
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ V +L++ YAKCG AR+ FD M +++ V+W+A+I GY + G G +L LF M
Sbjct: 442 DSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQ 501
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+PN++ F +LSACS+ G++ +G F SM +D+ P ++HY CMV LL R+G+
Sbjct: 502 QSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQF 561
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA++ + +P +P V ++ A L C ++ DLG+V +++LE+ P +VL+SN+Y
Sbjct: 562 DEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRVLEMEPQDDATHVLLSNMY 621
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
A+ RW V VR+ MK++ + K PG S V+
Sbjct: 622 ATAKRWDNVAYVRKNMKKKKVKKEPGLSWVE 652
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 159/353 (45%), Gaps = 27/353 (7%)
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
R + GK LH +ILK G ++ LL+ YV G + DA +FDE+ + VS+ +
Sbjct: 17 RDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLA 76
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
G+++S +A +L + N ++L + + VH+ +LG +
Sbjct: 77 QGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQ 136
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
D V AL+D Y+ C + AR +F+ KD+++W +++ +N
Sbjct: 137 ADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQM 196
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
P+ T+ + + +C L A +VG S+H + K ++YVG ALL Y K G+
Sbjct: 197 RIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKV-CYDRDLYVGIALLELYTKSGE 255
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILS 540
A+ F+ M + + + WS MI Y +L LF M V PN F ++L
Sbjct: 256 IAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQ 315
Query: 541 ACSHTGMVGEGWK---CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
AC+ ++ G + C + D S ++D+ A+ G +E +++
Sbjct: 316 ACASLVLLNLGNQIHSCVLKVGLDSNVFVSNA----LMDVYAKCGEIENSVKL 364
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/649 (33%), Positives = 341/649 (52%), Gaps = 69/649 (10%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L LC + SL K H + V G D TKL+ MY H+ A+ +FD MP P+
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
Y++ + +Y + +Y V+ Y M+ DN+VF KVL+AC +L + G+ +H
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120
Query: 171 EIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+++ G + V L+DMY KC + S+R VF+E ++++ SW SMI+GYV N A
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ L N MR E + +T +L +D
Sbjct: 181 AVELLNCMRLDGFEPDVVTWNTL-----------------------------------MD 205
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF-PNHV 348
Y + G +A V ++ +++SWT +I Y++ G D +L++F D + P+
Sbjct: 206 AYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLD 265
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-----NALVDMYAKCHVIADARYI 403
+ SVL + +G L G+ +H G ++ E TV AL+ MYAKC I DA +
Sbjct: 266 CLCSVLVSCRHIGALRSGKEIHGYGTKM--ETNTVFYSSAGAALLTMYAKCGRIQDAINV 323
Query: 404 FETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAV 446
FE + D++ WN++I G + ++ D T+ +++ C +
Sbjct: 324 FELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCD----L 379
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
Q G+ +HAY K LSS V V A+++ Y KCG +SA +F +M K+ V+W+ MIGG
Sbjct: 380 QYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGG 439
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
+GM G G +L L +M+ + PN FT++LSACSH+G+V EG++ F SM D+ P
Sbjct: 440 FGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITP 499
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
M+HY C+VD+LARAG+ +A+ F+ MP+EPD S++GA L C Y D G + +++
Sbjct: 500 RMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQNLDFGRLAAEQL 559
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+ + P A +YV +SN+YA GRW +VR+ ++ +GL K G SL++
Sbjct: 560 IRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSLIE 608
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 234/722 (32%), Positives = 367/722 (50%), Gaps = 52/722 (7%)
Query: 1 MKLISLLQRHVSRTKKPKLQLRFFSYTNQQTPT---------QHELDQTFASF------- 44
M + S+ +R S K P LQ FS +++ PT QH + +F
Sbjct: 95 MTIHSVFRRMYSYVK-PSLQPAIFSNLSKELPTNSYIIFLCKQHHYKEALEAFDFHLKNS 153
Query: 45 --HSLPS------IPCLNLLGLCKSTGSLKAFH-ALLIVDGLTNDKCNTKLVSMYGSFGH 95
H PS + C N +S K H +L + + +++MYG G
Sbjct: 154 NSHFEPSTYTSLVLACANF----RSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGS 209
Query: 96 VKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKA 155
+K AR VFD+M P+ S+ MI Y N D + Y M + + D F V+KA
Sbjct: 210 MKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKA 269
Query: 156 CCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSW 214
C DID G ++H ++K G L+ MY I + VF K+++SW
Sbjct: 270 CYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISW 329
Query: 215 TSMIAGYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
+MI GY+Q E L LF + +R+G + N+ GS+ +AC+ L L GK +HG +
Sbjct: 330 GTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCV 389
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K G+ N +L DMY K G + A+ F ++ + D+VSW A+I + +G ++A+
Sbjct: 390 KFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAID 449
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYA 392
F P+ +T S+L LN GR +HS +++G + + TV N+L+ MY
Sbjct: 450 FFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYT 509
Query: 393 KCHVIADARYIFETTSEK-DVIAWNSIISGLDDNVS-----------------PDAVTLV 434
KC + DA +F S ++++WN+I+S PD++T+
Sbjct: 510 KCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITIT 569
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
+++ CA L ++ VG+ +H YS K GL+ +V V L++ YAKCG + AR VFD+ +
Sbjct: 570 TLLGTCAELTSLGVGNQVHCYSIKSGLIL-DVSVCNGLIDMYAKCGSLKHARDVFDSTQN 628
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
+ V+WS++I GY G G +L LF M N VQPNEV + LSACSH G+V EGW+
Sbjct: 629 LDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRL 688
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYS 614
+ SM + P+ +H+ C+VDLLARAG L EA F++ ++ D++ + L C ++
Sbjct: 689 YKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHN 748
Query: 615 RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
D+ E +L+L P + V++ N++AS G W V ++R+LMKQ G+ K PG S +
Sbjct: 749 NVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWI 808
Query: 675 DL 676
++
Sbjct: 809 EV 810
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 330/610 (54%), Gaps = 20/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ +Y G+V AR +FDS+ N ++ +I Y K+ ++ M E
Sbjct: 98 LIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPS 157
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFD 204
F VL AC ++ G +VH ++V G F + T LV MY K + +RQVFD
Sbjct: 158 IITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFD 217
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++V ++ M+ GY ++ ++ LF RM++ ++ N+I+ S++ C AL
Sbjct: 218 GLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAW 277
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H + G+ + + T+L+ MY CG+I AR VFD + D+VSWT MI GY +
Sbjct: 278 GKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAE 337
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTV 383
+G + A LF + P+ +T +++A A NLN R +HS G D V
Sbjct: 338 NGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLV 397
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
ALV MYAKC I DAR +F+ +DV++W+++I +N +
Sbjct: 398 STALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNI 457
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD VT +++++AC LGA+ VG ++ + K L+S +V +G AL+ AK G + AR
Sbjct: 458 EPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVS-HVPLGNALIIMNAKHGSVERAR 516
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+FD M ++ +TW+AMIGGY + G+ +L LF ML E +PN V F +LSACS G
Sbjct: 517 YIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAG 576
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
V EG + F + VP++K Y CMVDLL RAG L+EA +++MP++P S++ +
Sbjct: 577 FVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSL 636
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ D+ E ++ L + P YV +S++YA+ G W V +VR++M+ RG+
Sbjct: 637 LVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIR 696
Query: 667 KSPGCSLVDL 676
K GC+ +++
Sbjct: 697 KEQGCTWIEV 706
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 265/528 (50%), Gaps = 28/528 (5%)
Query: 139 KRLKEHDNFV----FSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKC 193
+RL E N + + K+ + C ELRD G +V I++ G + + L L+ +Y+ C
Sbjct: 46 QRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSIC 105
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLV 253
++ +RQ+FD +K VV+W ++IAGY Q +E LF +M + +E + IT S++
Sbjct: 106 GNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVL 165
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
AC+ L+ GK +H ++ G + + TAL+ MYVK G++ DAR VFD L D+
Sbjct: 166 DACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVS 225
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
++ M+ GY +SG +KA +LF + PN ++ S+L L G+ VH+
Sbjct: 226 TFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQC 285
Query: 374 IRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------- 425
+ GL +D V +L+ MY C I AR +F+ +DV++W +I G +N
Sbjct: 286 MNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAF 345
Query: 426 ----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ PD +T + +++ACA + +H+ G +++ V TAL++
Sbjct: 346 GLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAG-FGTDLLVSTALVHM 404
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
YAKCG + AR VFDAM ++ V+WSAMIG Y G G + F M ++P+ V +
Sbjct: 405 YAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTY 464
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+L+AC H G + G + Y+ V + ++ + A+ G +E A + M
Sbjct: 465 INLLNACGHLGALDVGME-IYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTM- 522
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ DV + A + G L+ + +ML+ P+ + ++S
Sbjct: 523 VRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLS 570
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 156/507 (30%), Positives = 253/507 (49%), Gaps = 31/507 (6%)
Query: 37 LDQTFASFHSL------PSIPC-LNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTK 85
+ + FA F + PSI L++L C S L K HA ++ G +D + T
Sbjct: 139 VKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTA 198
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LVSMY G + AR VFD + D +F VM+ Y + ++ E + M++ + +
Sbjct: 199 LVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPN 258
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFD 204
F +L C + G VH + + G D V T L+ MY C I +R+VFD
Sbjct: 259 KISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFD 318
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++VVSWT MI GY +N ++ LF M+E ++ ++IT ++ ACA L+
Sbjct: 319 NMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNH 378
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ +H + G + + TAL+ MY KCG I+DAR VFD + D+VSW+AMI Y +
Sbjct: 379 AREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVE 438
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+GY +A + F K ++ P+ VT ++L+A LG L++G +++ I+ L + +
Sbjct: 439 NGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPL 498
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
NAL+ M AK + ARYIF+T +DVI WN++I G L +
Sbjct: 499 GNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERF 558
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
P++VT V V+SAC+ G V G Y + + V + +++ + G+ A
Sbjct: 559 RPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAE 618
Query: 487 MVFDAMREKNTVT-WSAMIGGYGMQGD 512
++ +M K T + WS+++ + G+
Sbjct: 619 LLIKSMPVKPTSSIWSSLLVACRIHGN 645
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 213/433 (49%), Gaps = 31/433 (7%)
Query: 233 LFNRMREGFVEGNQI---TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ R+ EG GN I T L C +LR GK + +I++ G ++N + + L+
Sbjct: 44 VLQRLGEG---GNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+Y CGN+ +AR +FD + + +V+W A+I GY Q G+ +A LF P+ +T
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTS 408
SVL A + LN G+ VH+ + G + D+ + ALV MY K + DAR +F+
Sbjct: 161 FLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLH 220
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+DV +N ++ G + + P+ ++ +S++ C + A+ G +
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+HA GL+ ++ V T+L+ Y CG + AR VFD M+ ++ V+W+ MI GY G
Sbjct: 281 VHAQCMNAGLV-DDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENG 339
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+ + LF+ M E +QP+ + + I++AC+ + + + +S F +
Sbjct: 340 NIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA-REIHSQVDIAGFGTDLLVS 398
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVS---LFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+V + A+ G +++A + + MP VS + GA++ F+ +M + +E
Sbjct: 399 TALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIE 458
Query: 629 LHPDKACYYVLVS 641
PD Y L++
Sbjct: 459 --PDGVTYINLLN 469
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 142/291 (48%), Gaps = 7/291 (2%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDS 105
I ++++ C + +L + H+ + + G D +T LV MY G +K AR VFD+
Sbjct: 361 ITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDA 420
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP D S+ MI Y N + E + M++ E D + +L AC L +D G
Sbjct: 421 MPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVG 480
Query: 166 MKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
M+++ + +K L L+ M AK + +R +FD + ++V++W +MI GY +
Sbjct: 481 MEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLH 540
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK-IGIEINSHL 283
A+E L LF+RM + N +T +++AC++ + +G+ Y+L+ GI L
Sbjct: 541 GNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKL 600
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVS-WTAMIVGYTQSGYPDKALK 333
++D+ + G + +A + + S W++++V G D A +
Sbjct: 601 YGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAER 651
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/552 (36%), Positives = 316/552 (57%), Gaps = 32/552 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIV--KVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ +L+ C ++ + + +H +++ + P+SF+ A +D + F
Sbjct: 35 FNSLLQQCLSIKQLKQ---IHAQLLTNSIHKPNSFLYK-----IADLKDFAYASVFFSNI 86
Query: 207 LDKNVVSWTSMIAGYVQN-DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
LD S+ MI G + + L ++RM+ ++ N +T L AC+ L A+ G
Sbjct: 87 LDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENG 146
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ H +++ G++ + H+ +L+ MY +CG + DAR VFDE+ DLVSW +MI GY++
Sbjct: 147 RMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKM 206
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
+ +A+ LF + A F PN +++ SVL A +LG+L +G V + + +Y +
Sbjct: 207 RHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMG 266
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
+AL+ MY KC + AR IF++ +KD + WN++I+G N +
Sbjct: 267 SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTA 326
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD +TL+ ++SACAS+GA+ +G + Y++++G +VYVGTAL++ YAKCG +A
Sbjct: 327 PDQITLIGILSACASIGALDLGKQVEIYASERGF-QDDVYVGTALVDMYAKCGSLDNAFR 385
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE--EVQPNEVIFTTILSACSHT 545
VF M +KN V+W+AMI G +LALF M+NE V PN++ F +LSAC H
Sbjct: 386 VFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHA 445
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG + F+ M F VP ++HY CMVDL +RAG LEEA +F+ MP +PD + GA
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGA 505
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C D+ E ++K +LEL P + YV+ S LYA+ RW ++R LMKQ+G+
Sbjct: 506 LLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565
Query: 666 SKSPGCSLVDLD 677
SK+PGCS +D++
Sbjct: 566 SKTPGCSWIDIN 577
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 264/524 (50%), Gaps = 47/524 (8%)
Query: 13 RTK-KPKLQLRFFSYT---NQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAF 68
RTK P L R+ + ++ P + L F S LL C S LK
Sbjct: 3 RTKASPHLISRYLNLQKPHSKPNPNRQALSDKFNS-----------LLQQCLSIKQLKQI 51
Query: 69 HALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
HA L+ + + K N+ L + YA F ++ +P YSF VMIR L+ +
Sbjct: 52 HAQLLTNSI--HKPNSFLYKI-ADLKDFAYASVFFSNILDPTEYSFNVMIRG--LSTAWN 106
Query: 129 D---IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
+EFY M+ + +N + + AC L ++ G HC +++ G D V
Sbjct: 107 KSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSH 166
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ MYA+C +G +R+VFDE K++VSW SMI+GY + A E + LF M E +
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQP 226
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N+++L S++ AC +L L G W+ ++++ + +N + +AL+ MY KCG++ AR +F
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIF 286
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + D V+W AMI GY Q+G ++A+KLF D + + P+ +T+ +LSA A +G L+
Sbjct: 287 DSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALD 346
Query: 365 MGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
+G+ V G +D + ALVDMYAKC + +A +F +K+ ++WN++IS L
Sbjct: 347 LGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALA 406
Query: 423 ------------------DDNVSPDAVTLVSVISACASLGAVQVGSSL-HAYSTKQGLLS 463
VSP+ +T V V+SAC G V G L H S+ GL+
Sbjct: 407 FHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVP 466
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGG 506
+ + +++ +++ G + A M EK + V A++G
Sbjct: 467 KIEHY-SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGA 509
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/613 (33%), Positives = 340/613 (55%), Gaps = 21/613 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T+ +S Y G++K A +F++M D + + VMIR + N L+ D V+FY M
Sbjct: 64 TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
DNF + V+KAC L D+ EG +VH +++K G D ++ L+ MYAK I S+ V
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F E +++VSW SMI+GYV L F M+ ++ ++ ++ ++ AC+ L
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFL 243
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H +++ +E++ + T+L+DMY KCG + A +FD++ +V+W AMI GY
Sbjct: 244 RNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGY 303
Query: 323 TQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
+ + ++ ++ P+ +T+ ++L AQL + +G+ VH IR G +
Sbjct: 304 SLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPH 363
Query: 382 TVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V+ ALVDMY +C + A +F +E+++I+WN++I+ N
Sbjct: 364 LVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCN 423
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ PDA T+ S++ A A L +++ +H Y TK L SN +V +++ Y KCG+
Sbjct: 424 KTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKL-DSNTFVSNSIVFMYGKCGNLL 482
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR +FD M K+ ++W+ +I Y + G G S+ LFS+M + +PN F ++L +CS
Sbjct: 483 RAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCS 542
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
G+V EGW+ F SM RD+ P ++HY C++DL+ R G L+ A F+E MP+ P ++
Sbjct: 543 VAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIW 602
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
G+ L +L E+ + +L L D YVL+SN+YA GRW V +++ MK+
Sbjct: 603 GSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKE 662
Query: 664 GLSKSPGCSLVDL 676
GL KS GCS+VDL
Sbjct: 663 GLEKSVGCSVVDL 675
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 132/485 (27%), Positives = 239/485 (49%), Gaps = 28/485 (5%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
+S LT + Y + + ++ +F+ + W MI G+V N + + ++RM
Sbjct: 59 NSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRME 118
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
G V G+ T ++ AC L L +G+ +HG ++K G++++ ++ +L+ MY K G I
Sbjct: 119 FGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIE 178
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
A VF E+ DLVSW +MI GY G ++L F + + + + ++ +L A +
Sbjct: 179 SAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACS 238
Query: 359 QLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
G L G+ +H +R LE D V +LVDMYAKC + A +F+ ++K ++AWN+
Sbjct: 239 LEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNA 298
Query: 418 IISGLDDNVS------------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+I G N PD +T+++++ CA L A+ +G S+H ++ +
Sbjct: 299 MIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRN 358
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G L ++ + TAL++ Y +CG + A +F M E+N ++W+AMI Y G+ ++ L
Sbjct: 359 GFL-PHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTL 417
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F D+ N+ ++P+ +IL A + + E + + K + +V +
Sbjct: 418 FQDLCNKTLKPDATTIASILPAYAELASLREAEQ-IHGYVTKLKLDSNTFVSNSIVFMYG 476
Query: 580 RAGRLEEALEFMENMPIEPDVS----LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
+ G L A E + M + +S + +HG G S +L M +K E P+ +
Sbjct: 477 KCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRIS-IELFSEMREKGFE--PNGST 533
Query: 636 YYVLV 640
+ L+
Sbjct: 534 FVSLL 538
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 153/330 (46%), Gaps = 21/330 (6%)
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+E NS +T L YV+ G +++A +F+ + D W MI G+ +G A+ +
Sbjct: 56 VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
++ ++ T V+ A L +L G VH I+ GL+ D + N+L+ MYAK
Sbjct: 116 RMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIG 175
Query: 396 VIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVIS 438
I A +F +D+++WNS+ISG + D +++ ++
Sbjct: 176 CIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILG 235
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
AC+ G ++ G +H + L +V V T+L++ YAKCG A +FD + +K+ V
Sbjct: 236 ACSLEGFLRNGKEIHC-QMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIV 294
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLN-EEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
W+AMIGGY + S A M ++ P+ + +L C+ + G K +
Sbjct: 295 AWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLG-KSVHG 353
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
F+P + +VD+ G+L+ A
Sbjct: 354 FAIRNGFLPHLVLETALVDMYGECGKLKPA 383
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
+N + +V MYG G++ AR +FD M D S+ +I Y ++ + +E + M
Sbjct: 463 SNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEM 522
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEG 165
R++ E + F +L +C ++EG
Sbjct: 523 REKGFEPNGSTFVSLLLSCSVAGLVNEG 550
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/642 (32%), Positives = 344/642 (53%), Gaps = 25/642 (3%)
Query: 59 CKSTGSLKA---FHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C G L H L++ G D T L+ Y + AR +FD + +++
Sbjct: 151 CTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTW 210
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
+I Y + ++ + M++ D +V S VL AC L+ ++ G ++HC +++
Sbjct: 211 TTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLR 270
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
G D ++ G +D Y KC + R++FD +DKNVVSWT++IAG +QN ++ L L
Sbjct: 271 SGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDL 330
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
F M + S++ +C L AL +G+ +H Y +K+ I+ + + L+DMY K
Sbjct: 331 FVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAK 390
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
C ++ DAR VF+ + +IDLVS+ AMI GY++ +AL LF + + + P + S+
Sbjct: 391 CDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSL 450
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDV 412
L SA L +L + +H L I+ G+ D +AL+D+Y+KC + DAR +FE +KD+
Sbjct: 451 LGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDI 510
Query: 413 IAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+ W ++ SG + P+ T +VI+A +++ +++ G H
Sbjct: 511 VVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQ 570
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K G + +V L++ YAK G + A F + K+T W++MI Y G+
Sbjct: 571 VIKMGF-DDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEK 629
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
+L +F DM+ E ++PN V F +LSACSHTG++ G+ F SM + F P ++HYVCMV
Sbjct: 630 ALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVCMV 688
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
LL RAG+L EA EF+E MPI+ ++ + L C + +LG + + +P +
Sbjct: 689 SLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSG 748
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YVL+SN++AS G W+ V ++RE M G+ K PGCS ++++
Sbjct: 749 SYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVN 790
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 187/693 (26%), Positives = 333/693 (48%), Gaps = 76/693 (10%)
Query: 34 QHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK---CNTKLVSMY 90
Q ++ + A+ P IPC K H+ ++V G NT L+ Y
Sbjct: 38 QRKIGRELANLLQSPHIPCC------------KKIHSKIVVFGFHKHDIFLVNT-LLHAY 84
Query: 91 GSFGHVKYARSVFDSMPNPDFYSFQVMIRWY-FLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
V +A +FD+M + + ++ M+ Y + + ++ F + MR ++ + ++
Sbjct: 85 SKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYIL 144
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ V++AC + ++ +++H +VK G D +V T L+D Y K I +R +FD
Sbjct: 145 ASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQV 204
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
K +WT++IAGY + +Q L LF++M+EG V ++ L S+++AC L+ L GK +
Sbjct: 205 KTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQI 264
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H Y+L+ GI ++ +V +D Y KC ++ R +FD + ++VSWT +I G Q+ +
Sbjct: 265 HCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFH 324
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINAL 387
AL LF + + P+ SVL++ L L GR VH+ I++ ++ D V N L
Sbjct: 325 RDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGL 384
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDA 430
+DMYAKC + DAR +F + D++++N++I G SP
Sbjct: 385 IDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTL 444
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
+ VS++ ASL +++ + +H K G +S + + G+AL++ Y+KC AR+VF+
Sbjct: 445 LIFVSLLGVSASLYHLELSNQIHGLIIKYG-VSLDEFAGSALIDVYSKCSRVGDARLVFE 503
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
+++K+ V W+AM GY Q + SL L+ + ++PNE F +++A S+ +
Sbjct: 504 EIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRH 563
Query: 551 GWKCFYSMCR----DFKFVPSM-----------------------KHYVC---MVDLLAR 580
G + + + D FV + K C M+ A+
Sbjct: 564 GQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQ 623
Query: 581 AGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKAC 635
G E+AL+ E+M +E P+ F L C DLG M + + P
Sbjct: 624 HGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEH 683
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
Y +VS L GR ++ + +E +++ + ++
Sbjct: 684 YVCMVSLL----GRAGKLYEAKEFIEKMPIKQA 712
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/614 (34%), Positives = 345/614 (56%), Gaps = 25/614 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE-- 143
L++MYG FG V+ A VFD MP + S+ ++ N ++++ +K + +
Sbjct: 237 LIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLM 296
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQV 202
D V+ C ++ GM H +K+G V + L+DMY+KC + +R +
Sbjct: 297 PDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVL 356
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRA 261
FD T +KNV+SW SMI GY ++ + L +M+ E V+ N++TL +++ C +
Sbjct: 357 FD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQ 415
Query: 262 LHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ K +HGY L+ G I+ + + A + Y KCG++ A VF + S + SW A+I
Sbjct: 416 FLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIG 475
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
G+ Q+G+P KAL L+ + + P+ TIAS+LSA A+L +L+ G+ +H +R G E
Sbjct: 476 GHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFEL 535
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
D + +LV +Y +C I A+ F+ EK+++ WN++I+G N
Sbjct: 536 DEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQML 595
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ PD ++++ + AC+ + A+++G LH ++ K L + + +V +L++ YAKCG
Sbjct: 596 SSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHL-TEHSFVTCSLIDMYAKCGCM 654
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ ++ +FD + K VTW+ +I GYG+ G G ++ LF M N +P+ V F +L+AC
Sbjct: 655 EQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTAC 714
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H G+V EG + M F P ++HY C+VD+L RAGRL EALE + +P +PD +
Sbjct: 715 NHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRI 774
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ + L C Y D+GE + K+LEL PDKA YVL+SN YA G+W V ++R+ MK+
Sbjct: 775 WSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKE 834
Query: 663 RGLSKSPGCSLVDL 676
GL K GCS +++
Sbjct: 835 IGLQKDAGCSWIEI 848
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 161/593 (27%), Positives = 277/593 (46%), Gaps = 48/593 (8%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T+LV+MY + VF++ + + + ++ Y N L++D V + M L E
Sbjct: 133 TRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMIS-LTE 191
Query: 144 H--DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSR 200
DNF V+KAC + D+ G VH +K D FV L+ MY K + S+
Sbjct: 192 FVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAV 251
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ------ITLGSLVT 254
+VFD+ +N+VSW S++ ++N +E LF +G + G++ T+ +++
Sbjct: 252 KVFDKMPQRNLVSWNSVMYACLENGVFEESYGLF----KGLLNGDEGLMPDVATMVTVIP 307
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
CA+ + G HG LK+G+ + ++LLDMY KCG + +AR +FD +++S
Sbjct: 308 LCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NEKNVIS 366
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSLG 373
W +MI GY++ A +L + D N VT+ +VL + + +H
Sbjct: 367 WNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYA 426
Query: 374 IRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------ 425
+R G D V NA V YAKC + A +F K V +WN++I G N
Sbjct: 427 LRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKA 486
Query: 426 -----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+ PD T+ S++SACA L ++ G +H + G + ++ +L++
Sbjct: 487 LDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNG-FELDEFICISLVS 545
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y +CG A++ FD M EKN V W+ MI G+ +L +F ML+ ++ P+E+
Sbjct: 546 LYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEIS 605
Query: 535 FTTILSACSHTGM--VGEGWKCF--YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
L ACS +G+ CF S + FV ++D+ A+ G +E++
Sbjct: 606 IIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVT-----CSLIDMYAKCGCMEQSQNI 660
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ + ++ +V+ + + G G++ + K M PD + L++
Sbjct: 661 FDRVHLKGEVT-WNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLT 712
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 241/471 (51%), Gaps = 34/471 (7%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
+L+ C E ++I+ G K+H I D ++T LV MY+ C S VF+ + K
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFVEGNQITLGSLVTACAKLRALHQGKW 267
N+ W ++++GY++N ++ + +F M FV N TL ++ AC + + G+
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDN-FTLPCVIKACVGVYDVRLGEA 217
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG+ LK + + + AL+ MY K G + A VFD++ +LVSW +++ ++G
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 328 PDKALKLFTDKKWAD--FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVI 384
+++ LF D P+ T+ +V+ A+ G + +G + H L ++LGL + V
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------------LDDNV 426
++L+DMY+KC + +AR +F+ T+EK+VI+WNS+I G ++D V
Sbjct: 338 SSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV 396
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ VTL++V+ C +H Y+ + G + S+ V A + YAKCG A
Sbjct: 397 KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAE 456
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF M K +W+A+IGG+ G +L L+ M ++P+ ++LSAC+
Sbjct: 457 GVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLK 516
Query: 547 MVGEGWKCFYSMCRD-FKFVPSMKHYVC--MVDLLARAGRLEEALEFMENM 594
+ G + SM R+ F+ + ++C +V L + G++ A F +NM
Sbjct: 517 SLSCGKEIHGSMLRNGFE----LDEFICISLVSLYVQCGKILLAKLFFDNM 563
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 214/422 (50%), Gaps = 26/422 (6%)
Query: 53 LNLLGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ ++ LC G ++ FH L + GL + K N+ L+ MY G++ AR +FD+
Sbjct: 303 VTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFDT-NE 361
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV-FSKVLKACCELRDIDEGMK 167
+ S+ MI Y + ++ E + M+ K N V VL C E + +
Sbjct: 362 KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKE 421
Query: 168 VHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+H ++ G D V V YAKC + + VF K V SW ++I G+VQN
Sbjct: 422 IHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNG 481
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
++ L L+ MR +E + T+ SL++ACA+L++L GK +HG +L+ G E++ +
Sbjct: 482 FPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICI 541
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+L+ +YV+CG I A+ FD + +LV W MI G++Q+ +P AL +F + +P
Sbjct: 542 SLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWP 601
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIF 404
+ ++I L A +Q+ L +G+ +H ++ L +++ + +L+DMYAKC + ++ IF
Sbjct: 602 DEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIF 661
Query: 405 ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQ 447
+ K + WN +I+G + PD+VT +++++AC G V
Sbjct: 662 DRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVA 721
Query: 448 VG 449
G
Sbjct: 722 EG 723
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 210/608 (34%), Positives = 334/608 (54%), Gaps = 25/608 (4%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + AR VFD +P PD ++ +IR Y + ++ Y+ M + + F VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
KAC L D+ G +H VG D FV T L+D+Y +C G + VF + ++VV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 213 SWTSMIAGYVQNDCAQEGLV-LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
+W +M+AGY + + L + G + N TL SL+ A+ AL QG +H Y
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 272 ILKIGIEINSHLV---TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
L+ ++ N V TALLDMY KC ++ A VF + + V+W+A+I G+
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 329 DKALKLFTDKKWADF-FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
+A LF D F + ++AS L A L +L MG +H+L + G+ D T N+
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
L+ MYAK +I +A +F+ + KD I++ +++SG N V PD
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T+VS+I AC+ L A+Q G H +GL + + +L++ YAKCG +R VF
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSVIIRGL-ALETSICNSLIDMYAKCGRIDLSRQVF 465
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M ++ V+W+ MI GYG+ G G + LF M N+ +P++V F +++ACSH+G+V
Sbjct: 466 DKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVT 525
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG F +M + +P M+HY+CMVDLLAR G L+EA +F+++MP++ DV ++GA L
Sbjct: 526 EGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALLGA 585
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C ++ DLG+ + + + +L P+ +VL+SN++++ GR+ +VR + K +G KSP
Sbjct: 586 CRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSP 645
Query: 670 GCSLVDLD 677
GCS ++++
Sbjct: 646 GCSWIEIN 653
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 238/522 (45%), Gaps = 40/522 (7%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
C L LC + HA GL D +T L+ +Y A +VF MP D
Sbjct: 109 CSALADLCAG----RTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRD 164
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKR--LKEHDNFVFSKVLKACCELRDIDEGMKV 168
++ M+ Y + +Y + M+ R L+ + + + S +L + + +G V
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVS-LLPLLAQHGALFQGTSV 223
Query: 169 HCEIVKV----GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
H ++ + T L+DMYAKC+ + + +VF +N V+W+++I G+V
Sbjct: 224 HAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLC 283
Query: 225 DCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
D E LF M EG + ++ S + CA L L G LH + K GI +
Sbjct: 284 DRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTA 343
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
+LL MY K G I +A +FDE+ D +S+ A++ GY Q+G ++A +F + +
Sbjct: 344 GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P+ T+ S++ A + L L GR H I GL + ++ N+L+DMYAKC I +R
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQ 463
Query: 403 IFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGA 445
+F+ +D+++WN++I+G + PD VT + +I+AC+ G
Sbjct: 464 VFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGL 523
Query: 446 VQVGSSLHAYST---KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWS 501
V G H + T K G+L + +++ A+ G A +M K V W
Sbjct: 524 VTEGK--HWFDTMTHKYGILPRMEHY-ICMVDLLARGGFLDEAYQFIQSMPLKADVRVWG 580
Query: 502 AMIGGYGMQG--DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A++G + D G ++ L E N V+ + I SA
Sbjct: 581 ALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSA 622
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 179/377 (47%), Gaps = 26/377 (6%)
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L+ ++ G + AR VFD + + D ++ A+I Y+ G A+ L+ + PN
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T VL A + L +L GR +H+ +GL D V AL+D+Y +C A +F
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159
Query: 407 TSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQV 448
+DV+AWN++++G ++ + P+A TLVS++ A GA+
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219
Query: 449 GSSLHAYSTKQGLLSS--NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
G+S+HAY + L + V +GTALL+ YAKC A VF M +N VTWSA+IGG
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGG 279
Query: 507 YGMQGDGGGSLALFSDMLNEEVQ-PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
+ + + LF DML E + + + L C+ + G + +++
Sbjct: 280 FVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ-LHALLAKSGIH 338
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
+ ++ + A+AG + EA + + I+ +S +GA L G + + ++ KK
Sbjct: 339 ADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTIS-YGALLSGYVQNGKAEEAFLVFKK 397
Query: 626 M--LELHPDKACYYVLV 640
M + PD A L+
Sbjct: 398 MQACNVQPDIATMVSLI 414
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/633 (34%), Positives = 329/633 (51%), Gaps = 23/633 (3%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ H L++ G + + CN LV++Y G+ A VF++M D S+ +I
Sbjct: 291 EQLHGLVLKQGFSLETYVCNA-LVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQ 349
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL 183
+E +K M + D + +L AC + + G + H +K G +L
Sbjct: 350 QGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIIL 409
Query: 184 TG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
G L+D+Y KC DI ++ + F T +NVV W M+ Y D E +F +M+ +
Sbjct: 410 EGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGI 469
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
E NQ T S++ C+ LRA+ G+ +H +LK G + N ++ + L+DMY K G + A
Sbjct: 470 EPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALK 529
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F L D+VSWTAMI GY Q +AL LF + + +++ AS +SA A +
Sbjct: 530 IFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQA 589
Query: 363 LNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
LN G+ +H+ G +D +V NALV +YA+C + DA + F+ KD I+WNS+ISG
Sbjct: 590 LNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISG 649
Query: 422 L-DDNVSPDAVTLVSVISACAS----------------LGAVQVGSSLHAYSTKQGLLSS 464
+A++L S +S + V++G +HA K G S
Sbjct: 650 FAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGH-DS 708
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V L+ YAKCG+ A F M EKN ++W+AM+ GY G G +L+LF DM
Sbjct: 709 ETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMK 768
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
V PN V F +LSACSH G+V EG K F SM VP +HY C+VDLL R+G L
Sbjct: 769 QLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLL 828
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
A F+E MPI+PD + L C ++ D+GE +LEL P + YVL+SN+Y
Sbjct: 829 SRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMY 888
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
A G+W ++ R++MK RG+ K PG S ++++
Sbjct: 889 AVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVN 921
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 269/526 (51%), Gaps = 28/526 (5%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
+L+ +Y +FG + A +VFD MP + ++ + + ++ ++ M + +
Sbjct: 108 RLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKP 167
Query: 145 DNFVFSKVLKAC----CELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSS 199
D ++ VL+ C ++ K+H + G +S FV L+D+Y K + S+
Sbjct: 168 DERTYAGVLRGCGGGDVPFHCVE---KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSA 224
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
++VFD ++ VSW +M++G Q+ C +E ++LF +M V S+++AC K+
Sbjct: 225 KKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKV 284
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
G+ LHG +LK G + +++ AL+ +Y + GN A VF+ + D VS+ ++I
Sbjct: 285 EFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLI 344
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
G +Q GY DKAL+LF P+ VT+AS+LSA + +G L +G+ HS I+ G+
Sbjct: 345 SGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMS 404
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS--GLDDN----------- 425
D + AL+D+Y KC I A F +T ++V+ WN ++ GL DN
Sbjct: 405 SDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQM 464
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+ P+ T S++ C+SL AV +G +H K G NVYV + L++ YAK G
Sbjct: 465 QMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTG-FQFNVYVSSVLIDMYAKLGK 523
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A +F ++EK+ V+W+AMI GY +L LF +M ++ + + + F + +SA
Sbjct: 524 LDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISA 583
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
C+ + +G + C + + +V L AR G++ +A
Sbjct: 584 CAGIQALNQGQQIHAQACVS-GYSDDLSVGNALVSLYARCGKVRDA 628
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 155/537 (28%), Positives = 265/537 (49%), Gaps = 33/537 (6%)
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDM 189
+ F M +R ++ + +L C +G K+H +I+K+G VL L+D+
Sbjct: 53 INFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDL 112
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y D+ + VFDE + + W ++ +V A L LF RM + V+ ++ T
Sbjct: 113 YIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTY 172
Query: 250 GSLVTACAKLRA-LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
++ C H + +H + G E + + L+D+Y K G + A+ VFD L
Sbjct: 173 AGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQ 232
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
D VSW AM+ G +QSG ++A+ LF + +P +SVLSA ++ +G
Sbjct: 233 KRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQ 292
Query: 369 VHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD--- 423
+H L ++ G LE Y V NALV +Y++ A +F ++D +++NS+ISGL
Sbjct: 293 LHGLVLKQGFSLETY-VCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQG 351
Query: 424 --------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
D + PD VT+ S++SAC+S+GA+ VG H+Y+ K G +SS++ +
Sbjct: 352 YSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAG-MSSDIILE 410
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
ALL+ Y KC D ++A F + +N V W+ M+ YG+ + S +F+ M E ++
Sbjct: 411 GALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRD-FKFVPSMKHYV--CMVDLLARAGRLEE 586
PN+ + +IL CS V G + + + F+F YV ++D+ A+ G+L+
Sbjct: 471 PNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQF----NVYVSSVLIDMYAKLGKLDH 526
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
AL+ + E DV + A + G + +F + K+M + +H D + +S
Sbjct: 527 ALKIFRRLK-EKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAIS 582
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 214/496 (43%), Gaps = 59/496 (11%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
+V+ + R + S F + L+ N T++ Y ++ G+ + M E V N
Sbjct: 12 IVNKIKQFRPVVSIFFFFQKFLEHN----TALSYAYSNDEGEANGINFLHLMEERGVRAN 67
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T L+ C G LHG ILK+G L L+D+Y+ G++ A +VFD
Sbjct: 68 SQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFD 127
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ L W ++ + + L LF P+ T A VL G++
Sbjct: 128 EMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGG-GDVPF 186
Query: 366 G--RMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+H+ I G E+ V N L+D+Y K + A+ +F+ ++D ++W +++SGL
Sbjct: 187 HCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGL 246
Query: 423 DDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+ V P SV+SAC + +VG LH KQG S
Sbjct: 247 SQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQG-FSLE 305
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
YV AL+ Y++ G+ A VF+AM +++ V+++++I G QG +L LF M
Sbjct: 306 TYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCL 365
Query: 526 EEVQPNEVIFTTILSACSHTG--MVGEGWKCF-------------------YSMCRDFK- 563
+ ++P+ V ++LSACS G +VG+ + + Y C D K
Sbjct: 366 DCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKT 425
Query: 564 ----FVPSMKHYVCMVDLLARA----GRLEEALEFMENMP---IEPDVSLFGAFLHGCGL 612
F+ + V + +++ A L E+ + M IEP+ + + L C
Sbjct: 426 AHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSS 485
Query: 613 YSRFDLGEVMIKKMLE 628
DLGE + ++L+
Sbjct: 486 LRAVDLGEQIHTQVLK 501
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 222/684 (32%), Positives = 368/684 (53%), Gaps = 35/684 (5%)
Query: 19 LQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVD-GL 77
L+ RF S+++ T H S + S P +LL C + +LK HA LIV G
Sbjct: 26 LRFRFCSFSSVLFRTHH-----LNSHYLTCSFPYSSLLHSCNNLQALKRIHASLIVSSGF 80
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
+KL+++Y + A S+ +S P+ + +I+ + + L+ + Y M
Sbjct: 81 QPLSVASKLITLYSQLNDFRSAFSICNSFEEPNTVIWNSIIKSHVDSGLFGYALLQYGRM 140
Query: 138 RKRLKEHDNFVFSKVLKACCELR-DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD 195
R+ HD+F F + +A L ++ G VHC +K+G G D + ++++Y KC
Sbjct: 141 RELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGS 200
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
IG++ ++FDE +++VSWTS+I+GY+ + G LFN+MR +E N +T+ ++ A
Sbjct: 201 IGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMRME-MEPNSVTMVVMLQA 259
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI-RDARSVFDELCSIDLVS 314
C+ ++++G+ LH Y++K G ++ + ++L MY K G + + F E+ D++S
Sbjct: 260 CSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIIS 319
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W +I Y+ G + + F + + + + ++ V+SA A NL+ G M+H I
Sbjct: 320 WNILIAFYSFRGDIAEVAERFNEMR-REVTSSIESLTLVVSAIANCANLSEGGMLHCSAI 378
Query: 375 RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
+ GL D ++ L+ +YAKC + + +F ++ I W+S++SG N
Sbjct: 379 KTGLHDTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIEL 438
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS-----NVYVGTAL 472
+ P+ + +++ A LGA+Q+G + HA+ + LSS + + T+L
Sbjct: 439 YQQMLASGLQPNHDIISTLVIAYTHLGALQLGKATHAFFIRN--LSSWPEEDSAPLETSL 496
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
LN Y +CG SA + F+ + K+ VTW++MI G+G G +L F ML EVQPN
Sbjct: 497 LNMYIRCGSISSALICFNRVVVKDVVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNS 556
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
V F ++LSACSH+G+V EG + F+SM F+ P + HY CMVDLL R+G+L+EAL +
Sbjct: 557 VTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEPDLNHYTCMVDLLGRSGKLKEALTVIL 616
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
+ PD ++GA L ++ LGE +K+LEL PD YY L SN+ AS RW
Sbjct: 617 KLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKLLELEPDNVGYYTLWSNIEASLERWGE 676
Query: 653 VNQVRELMKQRGLSKSPGCSLVDL 676
V +VR +M +R L K PG S +++
Sbjct: 677 VEEVRRVMHERDLKKKPGWSCIEV 700
>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Brachypodium distachyon]
Length = 697
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 212/601 (35%), Positives = 331/601 (55%), Gaps = 28/601 (4%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
AR +FD +P P ++R + + D + C+R R D F S +LKAC
Sbjct: 55 ARHLFDEIPVPTPRLANALLRAHVRARQWCDALLLIPCLRVR---PDAFTLSLLLKACAM 111
Query: 159 LRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
L + G +H ++ D+FV LV MYAKCR + S ++ + ++V TS
Sbjct: 112 LPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTS 171
Query: 217 MIAGYVQNDCAQEGLVLFNR--MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
M+ GY QN A E L F+R + +GF+ + +TL S+++A A+L+ + G+ H ++++
Sbjct: 172 MVTGYEQNRMAAEALEFFSRHVVGQGFMP-SPVTLVSVISAAAQLKDVLNGQACHAFVIR 230
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
E + LV A+L Y++ G ++ AR +F+ + D+V+W+ M+ GY QSG +AL
Sbjct: 231 NNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTA 290
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
+ A PN VT+ SV+ A + ++ GR VH + +++G E + TV ALVDMY K
Sbjct: 291 YKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMK 350
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSV 436
C +A +F S+KD +AW +ISG N PDAVT+V V
Sbjct: 351 CSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKV 410
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
++AC+ G ++ LH Y G ++V AL++ Y+KCG+ A VF++ EK+
Sbjct: 411 LAACSESGVMRQAFCLHGYLVITGF-CDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKD 469
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V WS+MI GYG+ G G ++ LF M+ V+PN + F ++LSACSH+G+V EG + F
Sbjct: 470 VVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFE 529
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
SM + + VP+ H+ MVDLL RAG L+EA + + D + A L C +
Sbjct: 530 SMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNG-RADAHTWCALLAACRAHHDT 588
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++ EV+ K+L+L PD A YY L++N+Y D W + R +++ RGL+K PGCS V+L
Sbjct: 589 EMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVEL 648
Query: 677 D 677
+
Sbjct: 649 N 649
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 143/530 (26%), Positives = 255/530 (48%), Gaps = 45/530 (8%)
Query: 50 IPCLN----------LLGLCKSTGSL---KAFHALLI--VDGLTNDKCNTKLVSMYGSFG 94
IPCL LL C +L +A HAL I T+ LV MY
Sbjct: 90 IPCLRVRPDAFTLSLLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCR 149
Query: 95 HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFS---- 150
+ + + +++ PD M+ Y N + + +EF+ R F+ S
Sbjct: 150 GMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFS----RHVVGQGFMPSPVTL 205
Query: 151 -KVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT-GLVDMYAKCRDIGSSRQVFDETLD 208
V+ A +L+D+ G H +++ VL ++ Y + + ++R++F+ +
Sbjct: 206 VSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTE 265
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
K+VV+W+ M+ GYVQ+ E L + +M E ++ N +T+ S+V AC+ + +G+ +
Sbjct: 266 KDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRV 325
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H +KIG E+ + TAL+DMY+KC +A +F + D V+W +I G+TQ+G P
Sbjct: 326 HDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLP 385
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINAL 387
D+++++F + FP+ VT+ VL+A ++ G + +H + G D V AL
Sbjct: 386 DESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAAL 445
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDA 430
VD+Y+KC + A +FE+ EKDV+ W+S+ISG + +V P++
Sbjct: 446 VDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNS 505
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
+T VSV+SAC+ G VQ G + T+ + N +A+++ + G+ Q A +
Sbjct: 506 LTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLH 565
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ TW A++ D S + + +L ++ P+ + +L+
Sbjct: 566 GNGRADAHTWCALLAACRAHHDTEMSEVVAAKLL--KLDPDHAGYYNLLN 613
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 214/632 (33%), Positives = 331/632 (52%), Gaps = 23/632 (3%)
Query: 66 KAFHALLIVDG--LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ HAL+ G L CN LV++Y + A VF M + D SF +I
Sbjct: 233 EQLHALVFKYGSSLETYVCNA-LVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQ 291
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL 183
+E + M++ + D + +L AC + +G ++H ++K G ++
Sbjct: 292 QGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIV 351
Query: 184 TG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
G L+D+Y C DI ++ ++F +NVV W M+ + + D E +F +M+ +
Sbjct: 352 EGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGL 411
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
NQ T S++ C + AL G+ +H ++K G + N ++ + L+DMY K G + A
Sbjct: 412 IPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHV 471
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+ L D+VSWTA+I GY Q +ALK F + +++ +S +SA A +
Sbjct: 472 ILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQA 531
Query: 363 LNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
LN GR +H+ G ED ++ NALV +YA+C I +A FE KD I+WN +ISG
Sbjct: 532 LNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISG 591
Query: 422 L-DDNVSPDAV----------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
DA+ T S +SA A++ ++ G +HA K+G S
Sbjct: 592 FAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGF-DS 650
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
++ V AL+ FYAKCG + AR F M EKN V+W+AMI GY G G ++ LF M
Sbjct: 651 DIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMK 710
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
PN V F +LSACSH G+V +G F SM ++ VP HY C+VDL++RAG L
Sbjct: 711 QVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFL 770
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
A +F+E MPIEPD +++ L C ++ ++GE + +LEL P+ + YVL+SN+Y
Sbjct: 771 SRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMY 830
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
A G+W +Q R++M+ RG+ K PG S +++
Sbjct: 831 AVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEV 862
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 288/575 (50%), Gaps = 28/575 (4%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
LL LC ++GSL K H ++ G N+ CN KLV +Y + G + VF+ MPN
Sbjct: 16 LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCN-KLVDVYFALGDLDGVVKVFEDMPNR 74
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR-DIDEGMKV 168
S+ +I + + +++ + CM + F+ VL+AC R I ++
Sbjct: 75 SVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQI 134
Query: 169 HCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H I+ G S +++ L+ +YAK I S+R+VFD K+ VSW +MI+G+ QN
Sbjct: 135 HARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYE 194
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+E + LF M + S+++ C K++ G+ LH + K G + +++ AL
Sbjct: 195 EEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNAL 254
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ +Y + N A VF ++ S D VS+ ++I G Q G+ D AL+LFT K P+
Sbjct: 255 VTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDC 314
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFET 406
VT+AS+LSA A G L G +HS I+ G+ D V AL+D+Y C I A +F T
Sbjct: 315 VTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLT 374
Query: 407 TSEKDVIAWNSIIS--GLDDNVS---------------PDAVTLVSVISACASLGAVQVG 449
++V+ WN ++ G DN+S P+ T S++ C S+GA+ +G
Sbjct: 375 AQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLG 434
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H K G NVYV + L++ YAK G +A ++ + E + V+W+A+I GY
Sbjct: 435 EQIHTQVIKTG-FQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQ 493
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
+L F +MLN +Q + + F++ +SAC+ + +G + ++ + +
Sbjct: 494 HNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQG-RQIHAQSYVSGYSEDLS 552
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+V L AR GR++EA E + + +S G
Sbjct: 553 IGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNG 587
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/552 (36%), Positives = 315/552 (57%), Gaps = 32/552 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIV--KVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ +L+ C ++ + + +H +++ + P+SF+ A +D + F
Sbjct: 35 FNSLLQQCLSIKQLKQ---IHAQLLTNSIHKPNSFLYK-----IADLKDFAYASVFFSNI 86
Query: 207 LDKNVVSWTSMIAGYVQN-DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
LD S+ MI G + + L ++RM+ ++ N +T L AC+ L A+ G
Sbjct: 87 LDPTEYSFNVMIRGLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENG 146
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ H +++ G++ + H+ +L+ MY +CG + DAR VFDE+ DLVSW +MI GY++
Sbjct: 147 RMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKM 206
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
+ +A+ LF + A F PN +++ SVL A +LG+L +G V + + +Y +
Sbjct: 207 RHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMG 266
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
+AL+ MY KC + AR IF++ +KD + WN++I+G N +
Sbjct: 267 SALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTA 326
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD +TL+ ++SACAS+GA+ +G + Y++++G +VYVGTAL++ YAKCG +A
Sbjct: 327 PDQITLIGILSACASIGALDLGKQVEIYASERGF-QDDVYVGTALVDMYAKCGSLDNAFR 385
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE--EVQPNEVIFTTILSACSHT 545
VF M KN V+W+AMI G +LALF M+NE V PN++ F +LSAC H
Sbjct: 386 VFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHA 445
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG + F+ M F VP ++HY CMVDL +RAG LEEA +F+ MP +PD + GA
Sbjct: 446 GLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGA 505
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C D+ E ++K +LEL P + YV+ S LYA+ RW ++R LMKQ+G+
Sbjct: 506 LLGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGV 565
Query: 666 SKSPGCSLVDLD 677
SK+PGCS +D++
Sbjct: 566 SKTPGCSWIDIN 577
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 164/524 (31%), Positives = 263/524 (50%), Gaps = 47/524 (8%)
Query: 13 RTK-KPKLQLRFFSYT---NQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAF 68
RTK P L R+ + ++ P + L F S LL C S LK
Sbjct: 3 RTKASPHLISRYLNLQKPHSKPNPNRQALSDKFNS-----------LLQQCLSIKQLKQI 51
Query: 69 HALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
HA L+ + + K N+ L + YA F ++ +P YSF VMIR L+ +
Sbjct: 52 HAQLLTNSI--HKPNSFLYKI-ADLKDFAYASVFFSNILDPTEYSFNVMIRG--LSTAWN 106
Query: 129 D---IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
+EFY M+ + +N + + AC L ++ G HC +++ G D V
Sbjct: 107 KSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVSH 166
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ MYA+C +G +R+VFDE K++VSW SMI+GY + A E + LF M E +
Sbjct: 167 SLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQP 226
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N+++L S++ AC +L L G W+ ++++ + +N + +AL+ MY KCG++ AR +F
Sbjct: 227 NEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIF 286
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + D V+W AMI GY Q+G ++A+KLF D + + P+ +T+ +LSA A +G L+
Sbjct: 287 DSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALD 346
Query: 365 MGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
+G+ V G +D + ALVDMYAKC + +A +F K+ ++WN++IS L
Sbjct: 347 LGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALA 406
Query: 423 ------------------DDNVSPDAVTLVSVISACASLGAVQVGSSL-HAYSTKQGLLS 463
VSP+ +T V V+SAC G V G L H S+ GL+
Sbjct: 407 FHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVP 466
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGG 506
+ + +++ +++ G + A M EK + V A++G
Sbjct: 467 KIEHY-SCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGA 509
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/550 (35%), Positives = 313/550 (56%), Gaps = 21/550 (3%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
VF +L+ C LR +++G +VH I+K G P+ ++ L+ MYAKC + +R+VFD
Sbjct: 49 VFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSI 108
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
D+N+VSWT+MI +V + E + M+ + +++T SL+ A L G+
Sbjct: 109 RDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQ 168
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+H I++ G+E+ + T+L+ MY KCG+I AR +FD L ++V+WT +I GY Q G
Sbjct: 169 KVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQG 228
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVIN 385
D AL+L + A+ PN +T AS+L L G+ VH I+ G + V+N
Sbjct: 229 QVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVN 288
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSP 428
+L+ MY KC + +AR +F +DV+ W ++++G + P
Sbjct: 289 SLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKP 348
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D +T SV+++C+S +Q G +H G + +VY+ +AL++ YAKCG A +V
Sbjct: 349 DKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGY-NLDVYLQSALVSMYAKCGSMDDASLV 407
Query: 489 FDAMREKNTVTWSAMIGGYGMQ-GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F+ M E+N V W+A+I G Q G +L F M + ++P++V FT++LSAC+H G+
Sbjct: 408 FNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGL 467
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG K F SM D+ P ++HY C VDLL RAG LEEA + +MP P S++GA L
Sbjct: 468 VEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALL 527
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C ++S + GE + +L+L PD YV +S++YA+ GR+ +VR++M++R + K
Sbjct: 528 SACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVK 587
Query: 668 SPGCSLVDLD 677
PG S +++D
Sbjct: 588 EPGQSWIEVD 597
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 215/419 (51%), Gaps = 24/419 (5%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
LL C SL + HA ++ G+ ++ L+SMY G + AR VFDS+ + +
Sbjct: 53 LLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRN 112
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ MI + + + + Y+ M+ + D F +L A + G KVH
Sbjct: 113 IVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHM 172
Query: 171 EIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
EIV+ G + V T LV MYAKC DI +R +FD +KNVV+WT +IAGY Q
Sbjct: 173 EIVEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDV 232
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L L M++ V N+IT S++ C AL GK +H YI++ G +V +L+
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLIT 292
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG + +AR +F +L D+V+WTAM+ GY Q G+ D+A+ LF + P+ +T
Sbjct: 293 MYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMT 352
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
SVL++ + L G+ +H + G D + +ALV MYAKC + DA +F S
Sbjct: 353 FTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMS 412
Query: 409 EKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACASLGAVQVG 449
E++V+AW +II+G + PD VT SV+SAC +G V+ G
Sbjct: 413 ERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 471
>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 223/619 (36%), Positives = 335/619 (54%), Gaps = 31/619 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDF--YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
L +Y S V+ AR VFD +P+P ++ +MIR Y N + ++ Y M
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVR 100
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEI-VKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
F + VLKAC LR I++G +H + D +V T LVD YAKC ++ + +V
Sbjct: 101 PTKFTYPFVLKACAGLRAIEDGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKV 160
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG-FVEGNQITLGSLVTACAKLRA 261
FDE +++V+W +MI+G+ + C + + LF MR + N T+ + A + A
Sbjct: 161 FDEMPKRDIVAWNAMISGFSLHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGA 220
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +GK +HGY ++G + + T +LD+Y K I AR VFD + V+W+AMI G
Sbjct: 221 LREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGG 280
Query: 322 YTQSGYPDKA----LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
Y ++ +A L++ + A P V I +L A+ G+L+ GR VH I+ G
Sbjct: 281 YVENEMIKEAGEVFLQMLVNADMAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAIKAG 338
Query: 378 -LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------- 425
+ D TV N ++ YAK + DA F KD++++NS+ISG +N
Sbjct: 339 FILDLTVGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFH 398
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ PD TL+ +++AC++L A+ GSS H Y G + N + AL++ Y KC
Sbjct: 399 QMKSSGIRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGY-AVNTSICNALMDMYTKC 457
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G A+ VFD M +++ V+W+ M+ G+G+ G G +L+LF+ M + V P+EV IL
Sbjct: 458 GKLYVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAIL 517
Query: 540 SACSHTGMVGEGWKCFYSMCR-DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
SACSH+G+V EG + F SM R DF +P + HY CM DLLARAG L+EA +F+ MP EP
Sbjct: 518 SACSHSGLVDEGKQLFNSMSRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEP 577
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
D+ + G L C Y +LG + KKM L VL+SN Y++ RW ++R
Sbjct: 578 DIRVLGTLLSACWTYKNVELGNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAAKIRM 636
Query: 659 LMKQRGLSKSPGCSLVDLD 677
K+ GL K+PG S VD+D
Sbjct: 637 TQKKSGLLKTPGYSWVDVD 655
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 239/495 (48%), Gaps = 35/495 (7%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
+F ++L++C R++ G +H ++K + S VL L +YA C ++ +R VFDE
Sbjct: 1 MFLRLLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 206 TLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
N ++W MI YV N A++ L L+ +M V + T ++ ACA LRA+
Sbjct: 61 IPHPRINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIE 120
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +H ++ + ++ TAL+D Y KCG + A VFDE+ D+V+W AMI G++
Sbjct: 121 DGKLIHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFS 180
Query: 324 QSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDY 381
+ LF D + +D PN TI + A + G L G+ VH R+G D
Sbjct: 181 LHCCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
V ++D+YAK I AR +F++ +K+ + W+++I G +N
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVN 300
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
V+P A+ L ++ CA G + G +H Y+ K G + ++ VG +++FYAK G
Sbjct: 301 ADMAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYAIKAGFI-LDLTVGNTVISFYAKYG 357
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
A F + K+ V+++++I G S LF M + ++P+ IL+
Sbjct: 358 SLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILT 417
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACS+ +G G C + C + + ++D+ + G+L A + M V
Sbjct: 418 ACSNLAALGHGSSC-HGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIV 476
Query: 601 S----LFGAFLHGCG 611
S LFG +HG G
Sbjct: 477 SWNTMLFGFGIHGLG 491
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 195/412 (47%), Gaps = 24/412 (5%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
KA H G +ND T ++ +Y + YAR VFDS + ++ MI Y N
Sbjct: 225 KAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVEN 284
Query: 125 DLYKDIVEFYKCM--RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSF 181
++ K+ E + M + +L C D+ G VHC +K G D
Sbjct: 285 EMIKEAGEVFLQMLVNADMAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLT 344
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V ++ YAK + + + F E K++VS+ S+I+G V+N A+E LF++M+
Sbjct: 345 VGNTVISFYAKYGSLCDAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSG 404
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + TL ++TAC+ L AL G HGY + G +N+ + AL+DMY KCG + A+
Sbjct: 405 IRPDITTLLGILTACSNLAALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAK 464
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD + D+VSW M+ G+ G +AL LF + P+ VT+ ++LSA + G
Sbjct: 465 RVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSG 524
Query: 362 NLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
++ G+ + + + D+ VI L ++A A Y+ E + + +
Sbjct: 525 LVDEGKQLFN---SMSRGDFNVIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFE----- 576
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLH------AYSTKQGLLSSNVY 467
PD L +++SAC + V++G+ + +T+ +L SN Y
Sbjct: 577 ------PDIRVLGTLLSACWTYKNVELGNEVSKKMQSLGETTESLVLLSNTY 622
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 370 bits (951), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 220/631 (34%), Positives = 338/631 (53%), Gaps = 23/631 (3%)
Query: 69 HALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA ++V+G+ N TKL+ MY G A+++F + + MIR + + +
Sbjct: 69 HAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQF 128
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGL 186
+ FY M D + F V+KAC L + G VH +I +G D FV + L
Sbjct: 129 DFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSL 188
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ Y++ I +R +FD K+ V W M+ GYV+N +F MR N
Sbjct: 189 IKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNS 248
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT--ALLDMYVKCGNIRDARSVF 304
+T +++ CA ++ G LHG ++ G+E++S + AL+D+Y KC ++ AR +F
Sbjct: 249 VTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIF 308
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D+ +D+V TAMI GY +G + AL++F N VT+ASVL A A L L
Sbjct: 309 DQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALT 368
Query: 365 MGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
+G+ +H ++ G + +A++DMYAKC + A F S+KD + WNS+I+
Sbjct: 369 LGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCS 428
Query: 424 DNVSP-----------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N P D V++ + +SACA+L A+ G +HA+ + G S++
Sbjct: 429 QNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMR-GAFRSDL 487
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ +AL++ Y+KCG+ A VFD M EKN V+W+++I YG G SL LF ML +
Sbjct: 488 FAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGD 547
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
+QP+ V F I+SAC H G V EG F M + + M+HY CMVDL RAGRL E
Sbjct: 548 GIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNE 607
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
A + +MP PD ++G L C L+ +L EV + + +L P + YYVL+SN++A+
Sbjct: 608 AFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHAN 667
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
G+W V ++R LMK+RG+ K PGCS +D++
Sbjct: 668 AGQWESVLKIRSLMKERGVQKVPGCSWIDVN 698
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/395 (29%), Positives = 175/395 (44%), Gaps = 49/395 (12%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L S++ C L QG+ H +L GI N L T LL MYV CG DA+++F +L
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
W MI G+T G D AL + P+ T V+ A L ++ +GR+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 369 VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-- 425
VH +G E D V ++L+ Y++ I DARY+F+ KD + WN +++G N
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL-LSSNVYVG 469
+P++VT V+S CAS + GS LH GL + S V
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
AL++ Y KC D + AR +FD + V +AMI GY + G +L +F +L E ++
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 348
Query: 530 PNEVIFTTILSACS-------------HTGMVGEGWKCF--------YSMCRDFKFVP-- 566
N V ++L AC+ H G G C+ Y+ C
Sbjct: 349 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 408
Query: 567 ----SMKHYVC---MVDLLARAGRLEEALEFMENM 594
S K VC M+ ++ G+ EEA++ M
Sbjct: 409 FIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQM 443
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 111/264 (42%), Gaps = 16/264 (6%)
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
DD+++P LVS++ C + G HA G + N +GT LL Y CG
Sbjct: 42 DDSLAPQ---LVSILQTCTDPSGLSQGRQAHAQMLVNG-IGYNGILGTKLLGMYVLCGAF 97
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A+ +F +R + W+ MI G+ M G +L + ML P++ F ++ AC
Sbjct: 98 LDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKAC 157
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
V G + + + F + ++ + G + +A + MP D L
Sbjct: 158 GGLNSVALG-RVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMP-SKDGVL 215
Query: 603 FGAFLHGCGLYSRFD--LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
+ L+G +D G M + E +P+ + ++S + AS+ I +N +L
Sbjct: 216 WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLS-VCASE---IMINFGSQL- 270
Query: 661 KQRGLSKSPGCSLVDLDIANDFSF 684
GL S G + D +AN F+
Sbjct: 271 --HGLVVSSGLEM-DSPVANTFAL 291
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 215/641 (33%), Positives = 351/641 (54%), Gaps = 22/641 (3%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFL 123
+ H +I + D T L+ MY S A S+F + N + ++ VMI +
Sbjct: 162 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 221
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
N +++ +E Y + + + F+ AC +D G +VHC+++K+ D +V
Sbjct: 222 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 281
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+ MYAK + +++VFD+ LDK V +MI+ ++ N A + L L+N+M+ G
Sbjct: 282 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGET 341
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ T+ SL++ C+ + + G+ +H ++K ++ N + +ALL MY KCG+ DA S
Sbjct: 342 PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADS 401
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VF + D+V+W +MI G+ Q+ AL LF + + + SV+SA L N
Sbjct: 402 VFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLEN 461
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS- 420
+ +G ++H I+ GLE D V +LVDMY+K A +F + K+++AWNS+IS
Sbjct: 462 VELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISC 521
Query: 421 ----GLDD---NVSP---------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
GL + N+ P D+V++ +V+ A +S+ A+ G +LHAY + + S
Sbjct: 522 YSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQI-PS 580
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
++ V AL++ Y KCG + A+++F+ M +N VTW++MI GYG G+ ++ LF +M
Sbjct: 581 DLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMK 640
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
E P+EV F ++++CSH+GMV EG F M ++ P M+HY +VDLL RAGRL
Sbjct: 641 RSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRL 700
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
++A F+ MPI+ D S++ L C + +LGE++ +L++ P + YV + NLY
Sbjct: 701 DDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLY 760
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
W R +R MK RGL KSPGCS +++ D FS
Sbjct: 761 GEVEMWDRAANLRASMKGRGLKKSPGCSWIEVKNRVDVFFS 801
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 181/678 (26%), Positives = 315/678 (46%), Gaps = 67/678 (9%)
Query: 2 KLISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKS 61
K SL Q VS + K++ QQ L+ + HS + L K+
Sbjct: 10 KFYSLRQTEVSPSINSKIKALV-----QQGKYSQALELHSKTPHSALTTAKFTFPSLLKT 64
Query: 62 TGSL------KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN-----P 109
SL + HA ++ GL +D T L++MY G + A VFD M P
Sbjct: 65 CASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAP 124
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID---EGM 166
D + +I YF H F + L C ++++ G
Sbjct: 125 DITVWNPVIDGYFKYG------------------H----FEEGLAQFCRMQELSWYMAGR 162
Query: 167 KVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-NVVSWTSMIAGYVQN 224
++H I++ + D ++ T L+ MY+ C + +F + ++ N+V+W MI G+V+N
Sbjct: 163 QIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 222
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
++ L L++ + + + TAC+ L G+ +H ++K+ + + ++
Sbjct: 223 GMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVC 282
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
T+LL MY K G++ DA+ VFD++ ++ AMI + +G AL L+ K +
Sbjct: 283 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETP 342
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYI 403
+ TI+S+LS + +G+ + GR VH+ I+ ++ I +AL+ MY KC DA +
Sbjct: 343 VDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSV 402
Query: 404 FETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAV 446
F T E+DV+AW S+I+G N V D+ + SVISA L V
Sbjct: 403 FYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENV 462
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++G +H ++ K+G L S+V+V +L++ Y+K G A+SA MVF +M KN V W++MI
Sbjct: 463 ELGHLIHGFAIKRG-LESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISC 521
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
Y G S+ L +L + V TT+L A S + +G K ++ +
Sbjct: 522 YSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKG-KTLHAYQIRLQIPS 580
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++ ++D+ + G L+ A ENMP ++ + + + G G + + + K+M
Sbjct: 581 DLQVENALIDMYVKCGCLKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCEEAVRLFKEM 639
Query: 627 L--ELHPDKACYYVLVSN 642
E PD+ + L+++
Sbjct: 640 KRSETAPDEVTFLALITS 657
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 188/357 (52%), Gaps = 13/357 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+LL C GS + HA +I + +N + L++MY G + A SVF +M
Sbjct: 350 SLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKER 409
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
D ++ MI + N +KD ++ ++ M K + D+ V + V+ A L +++ G +H
Sbjct: 410 DVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIH 469
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+K G D FV LVDMY+K S+ VF +KN+V+W SMI+ Y N +
Sbjct: 470 GFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPE 529
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L ++ + + +++ +++ A + + AL +GK LH Y +++ I + + AL+
Sbjct: 530 MSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALI 589
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMYVKCG ++ A+ +F+ + +LV+W +MI GY G ++A++LF + K ++ P+ V
Sbjct: 590 DMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEV 649
Query: 349 TIASVLSASAQLGNLNMGRMVHSL-----GIRLGLEDYTVINALVDMYAKCHVIADA 400
T +++++ + G + G + L G+ +E Y ++VD+ + + DA
Sbjct: 650 TFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYA---SVVDLLGRAGRLDDA 703
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 196/466 (42%), Gaps = 58/466 (12%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
SR+ + + S S I VQ + L L ++ + + T SL+ CA
Sbjct: 8 SRKFYSLRQTEVSPSINSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCAS 67
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-----CSIDLV 313
L L+ G+ +H I+ +G++ + ++ T+L++MYVKCG + A VFD++ + D+
Sbjct: 68 LSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDIT 127
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
W +I GY + G+ ++ L F + +L GR +H
Sbjct: 128 VWNPVIDGYFKYGHFEEGLAQFCRMQ-------------------ELSWYMAGRQIHGYI 168
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGL--------- 422
IR E D + AL+ MY+ C +A +F + + +++AWN +I G
Sbjct: 169 IRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKS 228
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
++N + + +AC+ + G +H K + YV T+LL
Sbjct: 229 LELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMN-FQDDPYVCTSLLT 287
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
YAK G + A+ VFD + +K +AMI + G +L L++ M E +
Sbjct: 288 MYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFT 347
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV----CMVDLLARAGRLEEALEF 590
+++LS CS G G + + SM+ V ++ + + G E+A
Sbjct: 348 ISSLLSGCSVVGSYDFGRTVHAEVIKR-----SMQSNVAIQSALLTMYYKCGSTEDADSV 402
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRF----DLGEVMIKKMLELHPD 632
M E DV +G+ + G RF DL M K+ ++ D
Sbjct: 403 FYTMK-ERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSD 447
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 223/658 (33%), Positives = 345/658 (52%), Gaps = 37/658 (5%)
Query: 49 SIPCLNLLGLCKSTGSL-----KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSV 102
+ PC+ + TGSL + H ++I GL D L++MYG FG V A V
Sbjct: 33 TFPCV----IKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKV 88
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKD----IVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
F MP + S+ +I + N KD +VE L + V VL C
Sbjct: 89 FHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLV--TVLPVCAR 146
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
D+ G+++H VK+G D V LVDMY+KC + ++ +FD+ KN VSW +M
Sbjct: 147 EVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTM 206
Query: 218 IAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
I G E LF M+ + +E N++T+ +++ AC ++ L K LHGY ++ G
Sbjct: 207 IGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHG 266
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+ + + + Y KCG + A VF + + + SW A+I G Q+G P KAL L+
Sbjct: 267 FQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYI 326
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCH 395
++ P+ TI S+L ASA L +L G+ VH +R GLE + I +L+ +Y C
Sbjct: 327 QMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCG 386
Query: 396 VIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVIS 438
+ AR +F+ EK ++WN++ISG + D P + +VSV+
Sbjct: 387 ESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLG 446
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
AC+ A+++G H Y+ K LL +V+V + ++ YAK G + +R VFD ++ K+
Sbjct: 447 ACSQQSALRLGKETHCYALK-ALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLA 505
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
+W+A+I YG+ GDG S+ LF M P+ F IL+ CSH G+V EG K F M
Sbjct: 506 SWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEM 565
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
P ++HY C++D+L RAGRL++AL + MP +PD ++ + L C + ++
Sbjct: 566 QNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEI 625
Query: 619 GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
G+++ +K+LEL P YV +SNLYA GRW V +VR+++K GL K GCS ++L
Sbjct: 626 GQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIEL 683
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 152/516 (29%), Positives = 265/516 (51%), Gaps = 32/516 (6%)
Query: 124 NDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N+LY D ++ F K + DNF F V+KAC D G +H ++K+G D F
Sbjct: 8 NELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVF 67
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V L+ MY K + ++ +VF +N+VSW S+I+G+ +N +++ + M G
Sbjct: 68 VGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG- 126
Query: 242 VEGNQITLGSLVT---ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
EG + +LVT CA+ + G +HG +K+G+ + + +L+DMY KCG +
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLT 186
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW-ADFFPNHVTIASVLSAS 357
+A+ +FD+ + VSW MI G GY +A LF + + D N VT+ ++L A
Sbjct: 187 EAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC 246
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
++ L + +H IR G + D V N V YAKC ++ A +F + K V +WN
Sbjct: 247 LEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWN 306
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I G N + PD T+ S++ A A L +++ G +H + +
Sbjct: 307 ALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRH 366
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G L + ++G +LL+ Y CG++ SAR++FD M EK++V+W+AMI GY G +L L
Sbjct: 367 G-LEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALIL 425
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDL 577
F ++++ QP+++ ++L ACS + G + + C K + +V +D+
Sbjct: 426 FRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKE---THCYALKALLMEDVFVACSTIDM 482
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
A++G ++E+ + + D++ + A + G++
Sbjct: 483 YAKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVH 517
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 209/609 (34%), Positives = 340/609 (55%), Gaps = 20/609 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++ Y ++ A +FD MP + SF + + Y + + + F + K E +
Sbjct: 76 LLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVN 135
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFD 204
FVF+ +LK + +H + K+G D+FV T L+D Y+ ++ +R VFD
Sbjct: 136 PFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFD 195
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ K++VSWT M+A Y +N +E L LFN+MR + N T+ + +C L A +
Sbjct: 196 DICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNV 255
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +HG LK + + + ALL++Y K G I DA+ +F+E+ DL+ W+ MI Y Q
Sbjct: 256 GKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQ 315
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
S +AL LF + PN+ T ASVL A A +L++G+ +HS ++ GL + V
Sbjct: 316 SDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFV 375
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
NA++D+YAKC I ++ +FE +++ + WN+II G L+ ++
Sbjct: 376 SNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDM 435
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
P VT SV+ A ASL A++ G +H+ + K + + + V +L++ YAKCG AR
Sbjct: 436 QPTEVTYSSVLRASASLAALEPGLQIHSLTIKT-MYNKDTVVANSLIDMYAKCGRINDAR 494
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+ FD M +++ V+W+AMI GY M G +L LF M + + +PN++ F +LSACS+ G
Sbjct: 495 LTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAG 554
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
++ +G F SM +D+ P ++HY CMV LL R GR +EA++ + + +P V ++ A
Sbjct: 555 LLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRAL 614
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ + DLG V + +LE+ P +VL+SN+YA+ GRW V VR+ M+++ +
Sbjct: 615 LGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVR 674
Query: 667 KSPGCSLVD 675
K PG S V+
Sbjct: 675 KEPGLSWVE 683
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 143/443 (32%), Positives = 233/443 (52%), Gaps = 20/443 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+ Y G+V AR VFD + D S+ M+ Y N Y++ ++ + MR +
Sbjct: 175 TALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYK 234
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
+NF S LK+C L + G VH C + D FV L+++YAK +I ++++
Sbjct: 235 PNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRL 294
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+E +++ W+ MIA Y Q+D ++E L LF RMR+ V N T S++ ACA +L
Sbjct: 295 FEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSL 354
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H +LK G+ N + A++D+Y KCG I ++ +F+EL + V+W +IVGY
Sbjct: 355 DLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGY 414
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LGLEDY 381
Q G ++A+ LFT D P VT +SVL ASA L L G +HSL I+ + +D
Sbjct: 415 VQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDT 474
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------D 424
V N+L+DMYAKC I DAR F+ +++D ++WN++I G
Sbjct: 475 VVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHT 534
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P+ +T V V+SAC++ G + G + +K + + T ++ + G
Sbjct: 535 DCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDE 594
Query: 485 A-RMVFDAMREKNTVTWSAMIGG 506
A +++ + + + + W A++G
Sbjct: 595 AMKLIGEIAYQPSVMVWRALLGA 617
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 245/469 (52%), Gaps = 27/469 (5%)
Query: 165 GMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G +HC I+K G D F L++ Y + + + ++FDE N +S+ ++ GY +
Sbjct: 54 GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ + L R+ + E N +L+ + H LH + K+G ++ +
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
TAL+D Y GN+ AR VFD++C D+VSWT M+ Y ++ + +++L+LF + +
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN--ALVDMYAKCHVIADAR 401
PN+ TI+ L + L N+G+ VH ++ G D+ + AL+++YAK I DA+
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALK-GCYDHDLFVGIALLELYAKSGEIIDAQ 292
Query: 402 YIFETTSEKDVIAWNSIIS----------GLD-------DNVSPDAVTLVSVISACASLG 444
+FE + D+I W+ +I+ LD +V P+ T SV+ ACAS
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
++ +G +H+ K G L+SNV+V A+++ YAKCG+ +++ +F+ + ++N VTW+ +I
Sbjct: 353 SLDLGKQIHSCVLKFG-LNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTII 411
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GY GDG ++ LF+ ML ++QP EV ++++L A + + G + +S+ +
Sbjct: 412 VGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQ-IHSLTIKTMY 470
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS----LFGAFLHG 609
++D+ A+ GR+ +A + M +VS + G +HG
Sbjct: 471 NKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHG 519
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 212/618 (34%), Positives = 346/618 (55%), Gaps = 35/618 (5%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
ND T+ + + G + A +F+ M + D + + V+IR Y N L+++ ++FY M
Sbjct: 57 NDLNITRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRME 116
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
DNF F V+KAC EL + G KVH +++K+G D +V L+DMY K I
Sbjct: 117 CEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIE 176
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+ +VFDE +++VSW SM++GY + L+ F M + ++ + S + AC+
Sbjct: 177 LAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACS 236
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
L G +H +++ +E++ + T+L+DMY KCG + A VF+ + S ++V+W A
Sbjct: 237 IEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNA 296
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
MI G + DK + P+ +T+ ++L + +Q G L G+ +H IR
Sbjct: 297 MIGGMQED---DKVI------------PDVITMINLLPSCSQSGALLEGKSIHGFAIRKM 341
Query: 378 LEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------------- 421
Y V+ ALVDMY KC + A ++F +EK++++WN++++
Sbjct: 342 FLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQ 401
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
L++ + PDA+T+ SV+ A A L + G +H+Y K GL SN ++ A++ YAKC
Sbjct: 402 HILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGL-GSNTFISNAIVYMYAKC 460
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
GD Q+AR FD M K+ V+W+ MI Y + G G S+ FS+M + +PN F ++L
Sbjct: 461 GDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLL 520
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
+ACS +G++ EGW F SM ++ P ++HY CM+DLL R G L+EA F+E MP+ P
Sbjct: 521 TACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPT 580
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
++G+ L ++ L E+ + +L L D YVL+SN+YA GRW V++++ L
Sbjct: 581 ARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYL 640
Query: 660 MKQRGLSKSPGCSLVDLD 677
MK++GL K+ GCS+VD++
Sbjct: 641 MKEQGLVKTVGCSMVDIN 658
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 66 KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H+ ++ GL +N + +V MY G ++ AR FD M D S+ MI Y ++
Sbjct: 432 KQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIH 491
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ ++F+ MR + + + F +L AC IDEG
Sbjct: 492 GFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEG 532
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 211/619 (34%), Positives = 342/619 (55%), Gaps = 29/619 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDL-YKDIVEFYKCMRKRLKE 143
L+S+Y G + A S+F M + D S+ M+ + N++ ++ ++ F +
Sbjct: 107 LISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYP 166
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCR-DIGSSR 200
++ + F+ +AC + G + +VK G D V GL+DM+ K R D+ S+
Sbjct: 167 NE-YCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VF++ ++N V+WT MI +Q A E + LF M E ++ TL +++ACA +
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANME 285
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC---GNIRDARSVFDELCSIDLVSWTA 317
L G+ LH ++ G+ ++ + L++MY KC G++ AR +FD++ ++ SWTA
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 318 MIVGYTQSG-YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
MI GY Q G Y ++AL LF PNH T +S L A A L L +G V + ++L
Sbjct: 346 MITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKL 405
Query: 377 GLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPD------ 429
G V N+L+ MYA+ I DAR F+ EK++I++N++I N++ +
Sbjct: 406 GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 430 -----------AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
A T S++S AS+G + G +HA K GL N V AL++ Y++
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL-KLNQSVCNALISMYSR 524
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG+ +SA VF+ M ++N ++W+++I G+ G +L LF ML E V+PN V + +
Sbjct: 525 CGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAV 584
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
LSACSH G+V EGWK F SM + +P M+HY CMVD+L R+G L EA++F+ +MP +
Sbjct: 585 LSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKA 644
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
D ++ FL C ++ +LG+ K ++E P Y+L+SNLYAS +W V+ +R+
Sbjct: 645 DALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRK 704
Query: 659 LMKQRGLSKSPGCSLVDLD 677
MK++ L K GCS V+++
Sbjct: 705 AMKEKNLIKEAGCSWVEVE 723
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 178/366 (48%), Gaps = 29/366 (7%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T + C + R+ G +H + + ++++S + +L+ +Y KCG A S+F +
Sbjct: 68 TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLM 127
Query: 308 -CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
S DL+SW+AM+ + + +AL F D ++PN A+ A + +++G
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 367 RMVHSLGIRLGL--EDYTVINALVDMYAKCHV-IADARYIFETTSEKDVIAWNSIISGLD 423
+ ++ G D V L+DM+ K + A +FE E++ + W +I+ L
Sbjct: 188 DSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 424 D-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
PD TL VISACA++ + +G LH+ + + G L+ +
Sbjct: 248 QFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG-LTLDR 306
Query: 467 YVGTALLNFYAKC---GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD-GGGSLALFSD 522
VG L+N YAKC G +AR +FD + + N +W+AMI GY +G +L LF
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVDLLARA 581
M+ V PN F++ L AC++ + G + F +++ F V + + ++ + AR+
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVAN--SLISMYARS 424
Query: 582 GRLEEA 587
GR+++A
Sbjct: 425 GRIDDA 430
>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 777
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 236/692 (34%), Positives = 352/692 (50%), Gaps = 40/692 (5%)
Query: 20 QLRFFSYTNQQTPTQH--ELDQTFASFH------SLPSIPCLNLLGLCKSTGSLKAFHAL 71
+L SY N QH E TF +FH L +NL+ C + SLK +
Sbjct: 44 ELSTNSYINLMCKQQHYREALDTF-NFHLKNSSIQLEPSTYVNLILACTNVRSLK--YGK 100
Query: 72 LIVDGLTNDKCNTKLV------SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
I D + C LV +MYG G +K AR FD+M S+ +MI Y N
Sbjct: 101 RIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNG 160
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-T 184
D + Y M + D F ++KACC DID G ++H ++K G +
Sbjct: 161 QENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQN 220
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVE 243
L+ MY K I + VF K+++SW SMI G+ Q E L LF M R+G +
Sbjct: 221 ALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQ 280
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N+ GS+ +AC L G+ + G K G+ N +L DMY K G + A+
Sbjct: 281 PNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRA 340
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F ++ S DLVSW A+I S ++A+ F P+ +T ++L A L
Sbjct: 341 FYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTL 399
Query: 364 NMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISG 421
N G +HS I++GL+ V N+L+ MY KC + DA +F+ SE ++++WN+I+S
Sbjct: 400 NQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSA 459
Query: 422 -----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
L PD +T+ +++ CA L +++VG+ +H +S K GL+
Sbjct: 460 CSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKSGLVV- 518
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+V V L++ YAKCG + AR VFD+ + + V+WS++I GY G G +L LF M
Sbjct: 519 DVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALNLFRMMR 578
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
N VQPNEV + +LSACSH G+V EGW + +M + P+ +H CMVDLLARAG L
Sbjct: 579 NLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVDLLARAGCL 638
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
EA F++ +PD++++ L C + D+ E + +L+L P + VL+SN++
Sbjct: 639 YEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPSNSAALVLLSNIH 698
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
AS G W V ++R LMKQ G+ K PG S +++
Sbjct: 699 ASAGNWKEVARLRNLMKQMGVQKVPGQSWIEV 730
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 212/609 (34%), Positives = 343/609 (56%), Gaps = 28/609 (4%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + AR +FD +P P + + +IR Y L + + R+RL + +N+ F VL
Sbjct: 77 GDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVL 136
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
KAC L D+ VHC + G D FV T LVD+YAKC + VF ++VV
Sbjct: 137 KACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVV 196
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+W +M+AGY + + + M++ N TL +L+ A+ AL QG+ +H Y
Sbjct: 197 AWNAMLAGYALHGKYSDTIACLLLMQDDHAP-NASTLVALLPLLAQHGALSQGRAVHAYS 255
Query: 273 LKIGIEINSH-----LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
++ ++ H + TALLDMY KCG++ A VF+ + + V+W+A++ G+ G
Sbjct: 256 VR-ACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGR 314
Query: 328 PDKALKLFTDKKWADF-FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
+A LF D F + ++AS L A A L +L +G+ +H+L + GL D T N
Sbjct: 315 MLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGN 374
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------DD-----------NVSP 428
+L+ MYAK +I A +F+ KD +++++++SG D+ NV P
Sbjct: 375 SLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQP 434
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D T+VS+I AC+ L A+Q G H +G+ +S + AL++ YAKCG +R +
Sbjct: 435 DVATMVSLIPACSHLAALQHGKCGHGSVIVRGI-ASETSICNALIDMYAKCGRIDLSRQI 493
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
FD M ++ V+W+ MI GYG+ G G + ALF DM ++ +P++V F ++SACSH+G+V
Sbjct: 494 FDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLV 553
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
EG + F+ M + P M+HY+ MVDLLAR G L+EA +F++ MP++ DV ++GA L
Sbjct: 554 TEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLG 613
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C ++ DLG+ + + +L P+ +VL+SN++++ GR+ +VR + K++G KS
Sbjct: 614 ACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKS 673
Query: 669 PGCSLVDLD 677
PGCS ++++
Sbjct: 674 PGCSWIEIN 682
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 236/510 (46%), Gaps = 37/510 (7%)
Query: 64 SLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
S +A H GL D +T LV +Y ++A +VF MP D ++ M+ Y
Sbjct: 147 SARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYA 206
Query: 123 LNDLYKDIVEFYKCMRKRLKEH--DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
L+ Y D + C+ +H + +L + + +G VH V+
Sbjct: 207 LHGKYSDTIA---CLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHD 263
Query: 181 -----FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
V T L+DMYAKC + + +VF+ +N V+W++++ G+V E LF
Sbjct: 264 HKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFK 323
Query: 236 RM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
M +G + ++ S + ACA L L GK LH + K G+ + +LL MY K
Sbjct: 324 DMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKA 383
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G I A ++FD++ D VS++A++ GY Q+G D+A ++F + + P+ T+ S++
Sbjct: 384 GLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLI 443
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVI 413
A + L L G+ H I G+ T I NAL+DMYAKC I +R IF+ +D++
Sbjct: 444 PACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIV 503
Query: 414 AWNSIISG--------------LD---DNVSPDAVTLVSVISACASLGAVQVGSS-LHAY 455
+WN++I+G LD PD VT + +ISAC+ G V G H
Sbjct: 504 SWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMM 563
Query: 456 STKQGLLSS-NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQG-- 511
+ K G+ Y+G +++ A+ G A M K V W A++G +
Sbjct: 564 AHKYGITPRMEHYIG--MVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNI 621
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
D G ++ L E N V+ + I SA
Sbjct: 622 DLGKQVSSMIQQLGPEGTGNFVLLSNIFSA 651
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 230/499 (46%), Gaps = 50/499 (10%)
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
C D+ +R +FD+ + + ++I Y A + + R + N T +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
+ AC+ L L + +H + + G+ + + TAL+D+Y KC + R A +VF + + D+
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 313 VSWTAMIVGYTQSG-YPD--KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
V+W AM+ GY G Y D L L D D PN T+ ++L AQ G L+ GR V
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQD----DHAPNASTLVALLPLLAQHGALSQGRAV 251
Query: 370 HSLGIR-LGLEDYT----VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
H+ +R L D+ V AL+DMYAKC + A +FE + ++ + W++++ G
Sbjct: 252 HAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVL 311
Query: 422 ----------LDDN-------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
D +SP +V S + ACA+L + +G LHA K G L +
Sbjct: 312 CGRMLEAFSLFKDMLAQGLCFLSPTSVA--SALRACANLSDLCLGKQLHALLAKSG-LHT 368
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
++ G +LL+ YAK G A +FD M K+TV++SA++ GY G + +F M
Sbjct: 369 DLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQ 428
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
VQP+ +++ ACSH + G KC + ++D+ A+ GR+
Sbjct: 429 ACNVQPDVATMVSLIPACSHLAALQHG-KCGHGSVIVRGIASETSICNALIDMYAKCGRI 487
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL-----HPDKACYYVL 639
+ + + + MP D+ + + G G++ LG+ L++ PD + L
Sbjct: 488 DLSRQIFDVMPAR-DIVSWNTMIAGYGIHG---LGKEATALFLDMKHQACEPDDVTFICL 543
Query: 640 V-----SNLYASDGRWIRV 653
+ S L RW +
Sbjct: 544 ISACSHSGLVTEGKRWFHM 562
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 191/390 (48%), Gaps = 30/390 (7%)
Query: 277 IEIN-SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
+ IN H++ + + CG++ AR +FD++ + + + A+I Y+ G
Sbjct: 58 LNINFPHIICQIDHNRMICGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYR 117
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
+ ++ PN+ T VL A + L +L R VH R GL D V ALVD+YAKC
Sbjct: 118 SLRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKC 177
Query: 395 HVIADARYIFETTSEKDVIAWNSIISG----------------LDDNVSPDAVTLVSVIS 438
A +F +DV+AWN++++G + D+ +P+A TLV+++
Sbjct: 178 ASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLP 237
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSN---VYVGTALLNFYAKCGDAQSARMVFDAMREK 495
A GA+ G ++HAYS + L + V VGTALL+ YAKCG A VF+AM +
Sbjct: 238 LLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVR 297
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE---VQPNEVIFTTILSACSHTGMVGEGW 552
N VTWSA++GG+ + G + +LF DML + + P V + L AC++ + G
Sbjct: 298 NEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSV--ASALRACANLSDLCLG- 354
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
K +++ + ++ + A+AG +++A + M ++ VS + A + G
Sbjct: 355 KQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVS-YSALVSGYVQ 413
Query: 613 YSRFDLGEVMIKKM--LELHPDKACYYVLV 640
+ D + +KM + PD A L+
Sbjct: 414 NGKADEAFRVFRKMQACNVQPDVATMVSLI 443
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 123/272 (45%), Gaps = 8/272 (2%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
C NL LC K HALL GL D L+SMY G + A ++FD M D
Sbjct: 345 CANLSDLCLG----KQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKD 400
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ ++ Y N + ++ M+ + D ++ AC L + G H
Sbjct: 401 TVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHG 460
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
++ G ++ + L+DMYAKC I SRQ+FD +++VSW +MIAGY + +E
Sbjct: 461 SVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKE 520
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTALL 288
LF M+ E + +T L++AC+ + +GK W H K GI ++
Sbjct: 521 ATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMV 580
Query: 289 DMYVKCGNIRDARSVFDEL-CSIDLVSWTAMI 319
D+ + G + +A + D+ W A++
Sbjct: 581 DLLARGGFLDEAYQFIQGMPLKADVRVWGALL 612
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 66/197 (33%), Gaps = 33/197 (16%)
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CGD AR +FD + ++A+I Y ++G S QPN F +
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 539 LSACS-------------HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
L ACS H G F S +VD+ A+
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVS--------------TALVDVYAKCASFR 181
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
A MP DV + A L G L+ ++ + M + H A V + L A
Sbjct: 182 HAATVFRRMPAR-DVVAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLA 240
Query: 646 -----SDGRWIRVNQVR 657
S GR + VR
Sbjct: 241 QHGALSQGRAVHAYSVR 257
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/551 (35%), Positives = 321/551 (58%), Gaps = 30/551 (5%)
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF-DETLDKN 210
L++C + +++++G ++H ++ G P +T L++MY+KC +G + VF D ++N
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
V ++ ++I+G+V N A +G + +MR V ++ T +V C ++ + K +HG
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHG 134
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+LK+G+E++ + +AL++ Y+K G++ DA+ VF EL D+V W AMI GY + G D+
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVD 389
AL++F P+ TI +LS A G+L+ G+ VH + +++G + +V NAL+D
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALID 254
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIIS-----------------GLDDNVSPDAVT 432
MY KC I DA IFE +EKD+ +WNSIIS L + PD VT
Sbjct: 255 MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVT 314
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGL-------LSSNVYVGTALLNFYAKCGDAQSA 485
+ +V+ AC+ L A+ G +H Y GL N+ V A+++ YAKCG +A
Sbjct: 315 ITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNA 374
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+FD+M +K+ +W+ MI GYGM G +L +FS M E +PNEV +LSAC+H
Sbjct: 375 LKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHA 434
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G V G M F +P+++HY C++D+L RAG LE+A E ++ MPI+ + ++ A
Sbjct: 435 GFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRA 494
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C L+ +L E+ +++L+L P+ YVL+SN+Y GR+ V +VR+ MK++ +
Sbjct: 495 LLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNV 554
Query: 666 SKSPGCSLVDL 676
K+PGCS ++L
Sbjct: 555 KKTPGCSWIEL 565
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 148/494 (29%), Positives = 239/494 (48%), Gaps = 36/494 (7%)
Query: 52 CLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVF-DSM 106
C+ L C +L K H+L+I G + + T L++MY G + A VF D
Sbjct: 14 CVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPC 73
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
+ +++ +I + N L +FYK MR D + F V++ CCE+ ++
Sbjct: 74 HERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEVK--- 130
Query: 167 KVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
K+H ++K+G D FV + LV+ Y K + +++VF E ++VV W +MI GY +
Sbjct: 131 KIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIG 190
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
C E L +F RM V ++ T+ +++ A L GK +HG ++K+G + +
Sbjct: 191 CLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSN 250
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY KC +I DA +F+ + D+ SW ++I + Q G D L+LF + P
Sbjct: 251 ALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILP 310
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL---------EDYTVINALVDMYAKCHV 396
+ VTI +VL A + L L GR +H I GL ++ V NA++DMYAKC
Sbjct: 311 DLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGS 370
Query: 397 IADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISA 439
+ +A IF++ S+KDV +WN +I G + P+ VTLV V+SA
Sbjct: 371 MNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSA 430
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTV 498
C G V G A + + T +++ + G + A + M + N V
Sbjct: 431 CNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPV 490
Query: 499 TWSAMIGGYGMQGD 512
W A++G + G+
Sbjct: 491 VWRALLGACRLHGN 504
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 193/387 (49%), Gaps = 21/387 (5%)
Query: 49 SIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP 107
+ PC+ + C +K H L+ GL D + LV+ Y G ++ A+ VF +
Sbjct: 115 TFPCV--VRTCCEVMEVKKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELS 172
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
D + MI Y + +E ++ M + F + +L D+D G
Sbjct: 173 IRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKT 232
Query: 168 VHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
VH ++K+G V L+DMY KC+ IG + +F+ +K++ SW S+I+ + Q
Sbjct: 233 VHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGD 292
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI-------EI 279
L LF++M + + +T+ +++ AC+ L AL G+ +HGY++ G+ +
Sbjct: 293 HDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAV 352
Query: 280 NSHLVT-ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
++ LV+ A++DMY KCG++ +A +FD + D+ SW MI+GY GY +AL +F+
Sbjct: 353 DNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQM 412
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAK 393
A+F PN VT+ VLSA G ++ GR M + G+ +E YT + +DM +
Sbjct: 413 CEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCV---IDMLGR 469
Query: 394 CHVIADARYIFETTS-EKDVIAWNSII 419
+ DA I + + + + W +++
Sbjct: 470 AGHLEDAYEIVQKMPIQANPVVWRALL 496
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 196/389 (50%), Gaps = 31/389 (7%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-S 309
+ + +CA + L++GK LH ++ G + +T+L++MY KCG + +A VF + C
Sbjct: 16 AFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHE 75
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
++ ++ A+I G+ +G K + + + P+ T V+ ++ + + +
Sbjct: 76 RNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKI 132
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------L 422
H +++GLE D V +ALV+ Y K + DA+ +F S +DV+ WN++I+G L
Sbjct: 133 HGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCL 192
Query: 423 DD-----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
D+ V+P T+ ++S AS G + G ++H K G S V V A
Sbjct: 193 DEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMG-YDSGVSVSNA 251
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ Y KC A ++F+ + EK+ +W+++I + GD G+L LF ML + P+
Sbjct: 252 LIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPD 311
Query: 532 EVIFTTILSACSHT-----GMVGEGWKCFYSMCRDFK--FVPSMKHYVCMVDLLARAGRL 584
V TT+L ACSH G G+ + +D + V ++ ++D+ A+ G +
Sbjct: 312 LVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSM 371
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLY 613
AL+ ++M + DV+ + + G G++
Sbjct: 372 NNALKIFDSMS-KKDVASWNIMIMGYGMH 399
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 129/275 (46%), Gaps = 26/275 (9%)
Query: 346 NHVT-IASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYI 403
N+VT + L + A NLN G+ +HSL I G I +L++MY+KC + +A +
Sbjct: 9 NNVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILV 68
Query: 404 F-ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGA 445
F + E++V A+N+IISG N V PD T V+ C +
Sbjct: 69 FYDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVME 128
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
V+ +H K G L +V+VG+AL+N Y K G + A+ VF + ++ V W+AMI
Sbjct: 129 VK---KIHGCLLKMG-LELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMIN 184
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GY G +L +F M + V P+ T ILS + G + G K + + +
Sbjct: 185 GYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNG-KTVHGIVMKMGYD 243
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
+ ++D+ + + +AL E M E D+
Sbjct: 244 SGVSVSNALIDMYGKCKHIGDALIIFE-MINEKDI 277
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 369 bits (946), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 217/649 (33%), Positives = 358/649 (55%), Gaps = 22/649 (3%)
Query: 49 SIPC-LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSM 106
+ PC L GL K H L I +G + +V MY + AR +FD M
Sbjct: 218 TFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRM 277
Query: 107 PN-PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P D S+ MI Y N + + + M+K + + F L+AC + I +G
Sbjct: 278 PEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 337
Query: 166 MKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
M +H ++K + FV L+ MYA+ +G + +F D + +SW SM++G+VQN
Sbjct: 338 MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQN 397
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E L ++ MR+ + + + + S++ A A+ G +H Y +K G++ + +
Sbjct: 398 GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVG 457
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+L+DMY K +++ +FD++ D+VSWT +I G+ Q+G +AL+LF + +
Sbjct: 458 NSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGID 517
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
+ + I+S+L A + L ++ + +HS IR GL D + N +VD+Y +C + A +F
Sbjct: 518 LDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMF 577
Query: 405 ETTSEKDVIAWNSIIS-----GL------------DDNVSPDAVTLVSVISACASLGAVQ 447
E KDV++W S+IS GL + V PD+++LVS++SA ASL A++
Sbjct: 578 ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALK 637
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +H + ++G + T L++ YA+CG + +R VF+ +R K+ V W++MI Y
Sbjct: 638 KGKEIHGFLIRKGFVLEGSLAST-LVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAY 696
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GM G G ++ LF M +E + P+ + F +L ACSH+G++ EG + SM +++ P
Sbjct: 697 GMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPW 756
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+HYVC+VDLL RA LEEA +F++ M +EP ++ A L C ++S +LGE+ +K+L
Sbjct: 757 PEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLL 816
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
E+ P+ YVLVSN+YA++ RW V +VR MK GL K+PGCS +++
Sbjct: 817 EMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEV 865
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 308/609 (50%), Gaps = 37/609 (6%)
Query: 29 QQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIV-DGLTNDK-CNTKL 86
Q+P+Q LD+ ++S L L G K+ + HA +I + L N +T+L
Sbjct: 105 NQSPSQFSLDEAYSSV--------LELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRL 156
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
V MYG G + A +FD MP+ +++ MI Y N +E Y+ MR D
Sbjct: 157 VFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDA 216
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLTGLVDMYAKCRDIGSSRQVFDE 205
F +LKAC L+D G +VH +K G FV +V MY KC D+ +RQ+FD
Sbjct: 217 CTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDR 276
Query: 206 TLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+K +VVSW SMI+ Y N + E L LF M++ + N T + + AC + Q
Sbjct: 277 MPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQ 336
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G ++H +LK IN + AL+ MY + G + +A ++F + D +SW +M+ G+ Q
Sbjct: 337 GMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ 396
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +AL+ + + + A P+ V + S+++ASA+ GN G +H+ ++ GL+ D V
Sbjct: 397 NGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQV 456
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
N+LVDMYAK + IF+ +KDV++W +II+G N +
Sbjct: 457 GNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGI 516
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D + + S++ AC+ L + +H+Y ++GL S++ + +++ Y +CG+ A
Sbjct: 517 DLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL--SDLVLQNGIVDVYGECGNVDYAA 574
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F+ + K+ V+W++MI Y G +L LF M V+P+ + +ILSA +
Sbjct: 575 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 634
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA---LEFMENMPIEPDVSLF 603
+ +G + + R FV +VD+ AR G LE++ F+ N + S+
Sbjct: 635 ALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMI 693
Query: 604 GAF-LHGCG 611
A+ +HGCG
Sbjct: 694 NAYGMHGCG 702
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 122/297 (41%), Gaps = 59/297 (19%)
Query: 405 ETTSEKDVIAWNSI------ISGLDDNVSPDAVTL----VSVISACASLGAVQVGSSLHA 454
ET S +++ S+ ++ L N SP +L SV+ C S A+ G +HA
Sbjct: 79 ETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHA 138
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+ L ++V++ T L+ Y KCG A +FD M K TW+AMIG Y G+
Sbjct: 139 HMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPL 198
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWKCF-------- 555
GSL L+ +M + + F IL AC H + EG+
Sbjct: 199 GSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIV 258
Query: 556 --YSMCRD-------FKFVPSMKHYV---CMVDLLARAGRLEEALEF---MENMPIEPDV 600
Y+ C D F +P + V M+ + G+ EAL M+ + P+
Sbjct: 259 GMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNT 318
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD--KACYY--VLVSN----LYASDGR 649
F A L C S IK+ + +H K+ YY V V+N +YA G+
Sbjct: 319 YTFVAALQACEDSS-------FIKQGMFIHATVLKSSYYINVFVANALIAMYARFGK 368
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 235/658 (35%), Positives = 351/658 (53%), Gaps = 40/658 (6%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLT--NDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
L+LL C + +L + H L+ LT + L +Y S V+ AR VFD +P
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 108 NPDF--YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+P ++ +MIR Y ND + ++ Y M + + VLKAC LR ID+G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 166 MKVHCEI-VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H + D +V T LVD YAKC ++ + +VFDE +++V+W +MI+G+ +
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 225 DCAQEGLVLFNRMREGFVEG---NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
C + + LF MR ++G N T+ + A + AL +GK +HGY ++G +
Sbjct: 183 CCLTDVIGLFLDMRR--IDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF----TD 337
+ T +LD+Y K I AR VFD + V+W+AMI GY ++ +A ++F +
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHV 396
A P V I +L A+ G+L+ GR VH ++ G + D TV N ++ YAK
Sbjct: 301 DNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 397 IADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISA 439
+ DA F KDVI++NS+I+G N + PD TL+ V++A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C+ L A+ GSS H Y G + N + AL++ Y KCG A+ VFD M +++ V+
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGY-AVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVS 477
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+ M+ G+G+ G G +L+LF+ M V P+EV ILSACSH+G+V EG + F SM
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537
Query: 560 R-DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
R DF +P + HY CM DLLARAG L+EA +F+ MP EPD+ + G L C Y +L
Sbjct: 538 RGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAEL 597
Query: 619 GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
G + KKM L VL+SN Y++ RW ++R + K+RGL K+PG S VD+
Sbjct: 598 GNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 348/661 (52%), Gaps = 27/661 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L LC + K HA GL D + LV +Y G ++ A +F MP +
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
++ V++ Y +++ + M + + + F + VLK C +++ +G +H
Sbjct: 280 VTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
I+K G + F+ GLVDMY+KC + VF ++V W+++I Q ++E
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+ LF+ MR G NQ T+ SL++A L G+ +H + K G E + + AL+ M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y+K G + D +++ + DL+SW A + G G D+ L +F F PN T
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSE 409
S+L + + L +++ GR VH+ I+ L+D V AL+DMYAKC + DA F S
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579
Query: 410 KDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSL 452
+D+ W II+ + V P+ TL +S C+SL +++ G L
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H+ K G +S +++VG+AL++ YAKCG + A +F+A+ ++T+ W+ +I GY G
Sbjct: 640 HSMVFKSGHVS-DMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQ 698
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
G +L F ML+E + P+ V FT ILSACSH G+V EG + F SM RDF P++ H
Sbjct: 699 GNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCA 758
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
CMVD+L R G+ +E +F++ M + + ++ L +++ LGE K+ EL P+
Sbjct: 759 CMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPE 818
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSR 686
+ Y+L+SN++A++GRW V +VR LM +G+ K PGCS V+ + +++D+S +
Sbjct: 819 EESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQ 878
Query: 687 V 687
+
Sbjct: 879 I 879
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 278/555 (50%), Gaps = 22/555 (3%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
+S G KA H L++ D + D LV++Y + YAR V MP+ D S+ +I
Sbjct: 126 RSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALI 185
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
+ D + ++ M+ + F + LKAC +D G ++H + K+G
Sbjct: 186 QGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLL 245
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FV + LVD+YAKC +I + ++F ++N V+W ++ GY Q L LF M
Sbjct: 246 LDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSM 305
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
E V+ N+ TL +++ CA + L QG+ +H I+K G E N + L+DMY KCG
Sbjct: 306 MELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLA 365
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
DA VF + D+V W+A+I Q G ++++KLF + D PN TI S+LSA+
Sbjct: 366 IDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAA 425
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
GNL G+ +H+ + G E D V NALV MY K + D ++E+ ++D+I+WN
Sbjct: 426 TNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWN 485
Query: 417 SIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+ +SGL D P+ T +S++ +C+ L V G +HA+ K
Sbjct: 486 AYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKN 545
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L +N +V TAL++ YAKC + A + F+ + ++ TW+ +I Y G +L
Sbjct: 546 QLDDNN-FVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M E V+PNE LS CS + EG + +SM V M +VD+ A
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSALVDMYA 663
Query: 580 RAGRLEEALEFMENM 594
+ G +EEA E +
Sbjct: 664 KCGCMEEAEALFEAL 678
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/535 (29%), Positives = 253/535 (47%), Gaps = 58/535 (10%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDI 196
+K+LK +S +L+ C R + +H IVK V PDS + LV++YAKCR
Sbjct: 109 KKKLK-----YYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYS 163
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+R V + D++VVSWT++I G V A + + LF M+ + N+ TL + + AC
Sbjct: 164 AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC 223
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ AL GK +H K+G+ ++ + +AL+D+Y KCG I A +F + + V+W
Sbjct: 224 SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWN 283
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++ GY Q G LKLF D N T+ +VL A NL G+++HSL I+
Sbjct: 284 VLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 377 GLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD----------- 424
G E I LVDMY+KC + DA +F+T + D++ W+++I+ LD
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 425 ------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ P+ T+ S++SA + G +Q G S+HA K G ++V V AL+ Y K
Sbjct: 404 HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG-FETDVAVSNALVTMYMK 462
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
G ++++M +++ ++W+A + G G L +F ML E PN F +I
Sbjct: 463 NGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISI 522
Query: 539 LSACS-----H---------------------TGMVGEGWKCFYSMCRDFKF----VPSM 568
L +CS H T ++ KC Y D F V +
Sbjct: 523 LGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDL 582
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGE 620
+ ++ A+ + E+AL + M ++P+ L GC + + G+
Sbjct: 583 FTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQ 637
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 212/661 (32%), Positives = 348/661 (52%), Gaps = 27/661 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L LC + K HA GL D + LV +Y G ++ A +F MP +
Sbjct: 220 LKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQND 279
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
++ V++ Y +++ + M + + + F + VLK C +++ +G +H
Sbjct: 280 VTWNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSL 339
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
I+K G + F+ GLVDMY+KC + VF ++V W+++I Q ++E
Sbjct: 340 IIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEES 399
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+ LF+ MR G NQ T+ SL++A L G+ +H + K G E + + AL+ M
Sbjct: 400 IKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTM 459
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y+K G + D +++ + DL+SW A + G G D+ L +F F PN T
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSE 409
S+L + + L +++ GR VH+ I+ L+D V AL+DMYAKC + DA F S
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579
Query: 410 KDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSL 452
+D+ W II+ + V P+ TL +S C+SL +++ G L
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H+ K G +S +++VG+AL++ YAKCG + A +F+A+ ++T+ W+ +I GY G
Sbjct: 640 HSMVFKSGHVS-DMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQ 698
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
G +L F ML+E + P+ V FT ILSACSH G+V EG + F SM RDF P++ H
Sbjct: 699 GNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCA 758
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
CMVD+L R G+ +E +F++ M + + ++ L +++ LGE K+ EL P+
Sbjct: 759 CMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPE 818
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSR 686
+ Y+L+SN++A++GRW V +VR LM +G+ K PGCS V+ + +++D+S +
Sbjct: 819 EESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQ 878
Query: 687 V 687
+
Sbjct: 879 I 879
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 278/555 (50%), Gaps = 22/555 (3%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
+S G KA H L++ D + D LV++Y + YAR V MP+ D S+ +I
Sbjct: 126 RSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVSWTALI 185
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
+ D + ++ M+ + F + LKAC +D G ++H + K+G
Sbjct: 186 QGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLL 245
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FV + LVD+YAKC +I + ++F ++N V+W ++ GY Q L LF M
Sbjct: 246 LDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSM 305
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
E V+ N+ TL +++ CA + L QG+ +H I+K G E N + L+DMY KCG
Sbjct: 306 MELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLA 365
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
DA VF + D+V W+A+I Q G ++++KLF + D PN TI S+LSA+
Sbjct: 366 IDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAA 425
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
GNL G+ +H+ + G E D V NALV MY K + D ++E+ ++D+I+WN
Sbjct: 426 TNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWN 485
Query: 417 SIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+ +SGL D P+ T +S++ +C+ L V G +HA+ K
Sbjct: 486 AYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKN 545
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L +N +V TAL++ YAKC + A + F+ + ++ TW+ +I Y G +L
Sbjct: 546 QLDDNN-FVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNY 604
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M E V+PNE LS CS + EG + +SM V M +VD+ A
Sbjct: 605 FRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSALVDMYA 663
Query: 580 RAGRLEEALEFMENM 594
+ G +EEA E +
Sbjct: 664 KCGCMEEAEALFEAL 678
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 156/535 (29%), Positives = 253/535 (47%), Gaps = 58/535 (10%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDI 196
+K+LK +S +L+ C R + +H IVK V PDS + LV++YAKCR
Sbjct: 109 KKKLK-----YYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYS 163
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+R V + D++VVSWT++I G V A + + LF M+ + N+ TL + + AC
Sbjct: 164 AYARLVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKAC 223
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ AL GK +H K+G+ ++ + +AL+D+Y KCG I A +F + + V+W
Sbjct: 224 SLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWN 283
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++ GY Q G LKLF D N T+ +VL A NL G+++HSL I+
Sbjct: 284 VLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKC 343
Query: 377 GLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD----------- 424
G E I LVDMY+KC + DA +F+T + D++ W+++I+ LD
Sbjct: 344 GYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLF 403
Query: 425 ------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ P+ T+ S++SA + G +Q G S+HA K G ++V V AL+ Y K
Sbjct: 404 HLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYG-FETDVAVSNALVTMYMK 462
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
G ++++M +++ ++W+A + G G L +F ML E PN F +I
Sbjct: 463 NGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISI 522
Query: 539 LSACS-----H---------------------TGMVGEGWKCFYSMCRDFKF----VPSM 568
L +CS H T ++ KC Y D F V +
Sbjct: 523 LGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDL 582
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGE 620
+ ++ A+ + E+AL + M ++P+ L GC + + G+
Sbjct: 583 FTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQ 637
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 215/620 (34%), Positives = 340/620 (54%), Gaps = 26/620 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM--RKRLKE 143
L++ YG+ G A VFD MP D S+ +I L+ Y++ + F++ M K +
Sbjct: 178 LLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQ 237
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D VL C E D VHC +KVG G V LVD+Y KC +S++
Sbjct: 238 PDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKK 297
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFDE ++NV+SW ++I + + L +F M + + N +T+ S++ +L
Sbjct: 298 VFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGL 357
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
G +HG+ LK+ IE + + +L+DMY K G+ R A ++F+++ ++VSW AMI
Sbjct: 358 FKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIAN 417
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
+ ++ +A++L + PN+VT +VL A A+LG LN+G+ +H+ IR+G D
Sbjct: 418 FARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLD 477
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V NAL DMY+KC + A+ +F S +D +++N +I G
Sbjct: 478 LFVSNALTDMYSKCGCLNLAQNVF-NISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRL 536
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ PD V+ + V+SACA+L ++ G +H ++ L ++++V +LL+ Y +CG
Sbjct: 537 LGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRK-LFHTHLFVANSLLDLYTRCGRID 595
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A VF ++ K+ +W+ MI GYGM+G+ ++ LF M + V+ + V F +LSACS
Sbjct: 596 LATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACS 655
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G++ +G K F MC D P+ HY CMVDLL RAG +EEA + + + I PD +++
Sbjct: 656 HGGLIEKGRKYFKMMC-DLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIPDTNIW 714
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
GA L C ++ +LG + + EL P YY+L+SN+YA RW N+VRELMK R
Sbjct: 715 GALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSR 774
Query: 664 GLSKSPGCSLVDL-DIANDF 682
G K+PGCS V + D+ + F
Sbjct: 775 GAKKNPGCSWVQVGDLVHAF 794
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 168/613 (27%), Positives = 293/613 (47%), Gaps = 53/613 (8%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCN--TKLVSMYGSFGH-----------VKYA 99
L L LC + K HA ++ G + L+ Y SFGH V Y+
Sbjct: 41 LQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAYS 100
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
RS F + +IR + ++ + +R +K D + VLK C +
Sbjct: 101 RSAF---------LWNTLIRANSIAGVFDGFGTYNTMVRAGVKP-DECTYPFVLKVCSDF 150
Query: 160 RDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
++ +G +VH K+G D FV L+ Y C G + +VFDE +++ VSW ++I
Sbjct: 151 VEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVI 210
Query: 219 AGYVQNDCAQEGLVLFNRM---REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
+ +E L F M + G ++ + +T+ S++ CA+ + +H Y LK+
Sbjct: 211 GLCSLHGFYEEALGFFRVMVAAKPG-IQPDLVTVVSVLPVCAETEDKVMARIVHCYALKV 269
Query: 276 GIEINSHLV--TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
G+ + H+ AL+D+Y KCG+ + ++ VFDE+ +++SW A+I ++ G AL
Sbjct: 270 GL-LGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALD 328
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYA 392
+F PN VTI+S+L +LG +G VH +++ +E D + N+L+DMYA
Sbjct: 329 VFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYA 388
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVS 435
K A IF +++++WN++I+ N +P+ VT +
Sbjct: 389 KSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTN 448
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V+ ACA LG + VG +HA + G S +++V AL + Y+KCG A+ VF+ + +
Sbjct: 449 VLPACARLGFLNVGKEIHARIIRVG-SSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVR 506
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
+ V+++ +I GY D SL LFS+M ++P+ V F ++SAC++ + +G +
Sbjct: 507 DEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIH 566
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+ R F + ++DL R GR++ A + + DV+ + + G G+
Sbjct: 567 GLLVRKL-FHTHLFVANSLLDLYTRCGRIDLATKVFYCIQ-NKDVASWNTMILGYGMRGE 624
Query: 616 FDLGEVMIKKMLE 628
D + + M E
Sbjct: 625 LDTAINLFEAMKE 637
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 238/483 (49%), Gaps = 30/483 (6%)
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
K LV +YG G K ++ VFD + + S+ +I + Y D ++ ++ M
Sbjct: 277 KVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDE 336
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
++ S +L EL GM+VH +K+ D F+ L+DMYAK GSS
Sbjct: 337 GMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKS---GSS 393
Query: 200 R---QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
R +F++ +N+VSW +MIA + +N E + L +M+ N +T +++ AC
Sbjct: 394 RIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPAC 453
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A+L L+ GK +H I+++G ++ + AL DMY KCG + A++VF+ + D VS+
Sbjct: 454 ARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYN 512
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+I+GY+++ ++L+LF++ + P+ V+ V+SA A L + G+ +H L +R
Sbjct: 513 ILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRK 572
Query: 377 GLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
+ V N+L+D+Y +C I A +F KDV +WN++I G
Sbjct: 573 LFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLF 632
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+D V D+V+ V+V+SAC+ G ++ G + ++ + +++ +
Sbjct: 633 EAMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYA-CMVDLLGR 691
Query: 479 CGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
G + A + + +T W A++G + G+ L L++ E++P +
Sbjct: 692 AGLMEEAADLIRGLSIIPDTNIWGALLGACRIHGN--IELGLWAAEHLFELKPQHCGYYI 749
Query: 538 ILS 540
+LS
Sbjct: 750 LLS 752
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 211/427 (49%), Gaps = 29/427 (6%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+P L LGL K + F + ++ ++ + L+ MY G + A ++F+ M
Sbjct: 349 LPVLGELGLFKLGMEVHGFSLKMAIE--SDVFISNSLIDMYAKSGSSRIASTIFNKMGVR 406
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ MI + N L + VE + M+ + + +N F+ VL AC L ++ G ++H
Sbjct: 407 NIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIH 466
Query: 170 CEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
I++VG D FV L DMY+KC + ++ VF+ ++ ++ VS+ +I GY + + +
Sbjct: 467 ARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISV-RDEVSYNILIIGYSRTNDSL 525
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E L LF+ MR + + ++ +V+ACA L + QGK +HG +++ + + +LL
Sbjct: 526 ESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLL 585
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
D+Y +CG I A VF + + D+ SW MI+GY G D A+ LF K + V
Sbjct: 586 DLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSV 645
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETT 407
+ +VLSA + G + GR + L +E +T +VD+ + ++ +A
Sbjct: 646 SFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEA------- 698
Query: 408 SEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVG--SSLHAYSTKQG----- 460
D+I SII PD +++ AC G +++G ++ H + K
Sbjct: 699 --ADLIRGLSII--------PDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYY 748
Query: 461 LLSSNVY 467
+L SN+Y
Sbjct: 749 ILLSNMY 755
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ + L+ + + C +L + +HAYS G L +V + +L+ YA G ++
Sbjct: 34 TSNPPNLLQLCTLCDTLSQTK---QVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSL 90
Query: 487 MVFD--AMREKNTVTWSAMIGGYGMQG--DGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
++F ++ W+ +I + G DG G+ ++ M+ V+P+E + +L C
Sbjct: 91 LLFQHSVAYSRSAFLWNTLIRANSIAGVFDGFGT---YNTMVRAGVKPDECTYPFVLKVC 147
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S V +G + + + F + ++ G +A++ + MP VS
Sbjct: 148 SDFVEVRKG-REVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVS- 205
Query: 603 FGAFLHGCGLYSRFD--LG--EVMIKKMLELHPD 632
+ + C L+ ++ LG VM+ + PD
Sbjct: 206 WNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPD 239
>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 800
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 219/654 (33%), Positives = 362/654 (55%), Gaps = 40/654 (6%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C G+L + H +I GL D T L+ MYG G + A+ VFD+M
Sbjct: 104 SVLRACAGFGNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTR 163
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
D S+ +I Y N + +E ++ + + E D+ + AC EL + VH
Sbjct: 164 DLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVH 223
Query: 170 CEIVK----VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
I++ GP + LV MY++C D S+ ++F ++++ SWT+MI+ Y ++
Sbjct: 224 GCIIRQRIETRGP---LNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSR 280
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK-IGIEINSHLV 284
++ L +F M E V N +T+ +++++CA L +GK +H Y +K I ++ +S L
Sbjct: 281 WFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDS-LG 339
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL++ Y + G + V + +++SW +I Y G +AL +F +
Sbjct: 340 PALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQI 399
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
P+ +++S +SA A +G L +G +H I+ + D V N+L+DMY+KC + A IF
Sbjct: 400 PDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFVQNSLIDMYSKCGHVDLAYLIF 459
Query: 405 ETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQ 447
+ K V+AWNS+I G + + + VT ++ I AC+ +G ++
Sbjct: 460 DRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLE 519
Query: 448 VGSSLH----AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G LH AY K+ L ++ TAL++ YAKCGD + A VFD+M E++ V+WSAM
Sbjct: 520 KGKWLHHKLIAYGVKKDL-----FIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAM 574
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
IGG GM GD +++LF++M+ E++PN++ F ILSACSH+G V EG K +++ ++F+
Sbjct: 575 IGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEG-KFYFNSMKNFE 633
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
P+++H+ CMVDLL+RAG L+EA + +MP + S++GA L+GC ++ R D+ +
Sbjct: 634 VEPNLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIE 693
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ +L++ D YY L+SN+YA +G W +VR MK GL K PG S ++LD
Sbjct: 694 RDLLDMRTDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELD 747
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 181/605 (29%), Positives = 318/605 (52%), Gaps = 26/605 (4%)
Query: 59 CKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
C S L H+ L+V GL +D + +TKL+ Y G ++ ++ VF++ NPD + + V+
Sbjct: 11 CTSLRPLTLLHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVL 70
Query: 118 IRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
I+ + ++ + + Y M + +F+FS VL+AC ++D G +VH I+K G
Sbjct: 71 IKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGL 130
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D V T L+ MY + ++++VFD +++VSW+S+I+ YV N + EGL +F
Sbjct: 131 DVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRL 190
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+ VE + +T+ S+ AC +L L K +HG I++ IE L AL+ MY +C +
Sbjct: 191 LVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDD 250
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
A +F + + + SWTAMI Y +S + +AL++F + PN VTI +VLS+
Sbjct: 251 FSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSS 310
Query: 357 SAQLGNLNMGRMVHSLGIR-LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
A L G+ VH ++ + L+D ++ AL++ YA+ ++ + T ++++I+W
Sbjct: 311 CAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISW 370
Query: 416 NSIIS-----GL------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
N +IS GL PD+ +L S ISACA++G + +G +H Y+ K
Sbjct: 371 NMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIK 430
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
+ +L +V +L++ Y+KCG A ++FD ++ K+ V W++MI G+ G+ ++
Sbjct: 431 RHILDE--FVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIR 488
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF M + NEV F T + ACSH G + +G K + + + ++D+
Sbjct: 489 LFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKG-KWLHHKLIAYGVKKDLFIDTALIDMY 547
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACY 636
A+ G L A ++M E V + A + GCG++ D + +M+ E+ P+ +
Sbjct: 548 AKCGDLRIAHRVFDSMS-ERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITF 606
Query: 637 YVLVS 641
++S
Sbjct: 607 MNILS 611
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 367 bits (943), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 210/619 (33%), Positives = 343/619 (55%), Gaps = 29/619 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDL-YKDIVEFYKCMRKRLKE 143
L+S+Y G + A S+F M + D S+ M+ + N++ ++ ++ F +
Sbjct: 107 LISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYP 166
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCR-DIGSSR 200
++ + F+ +AC + G + ++K G D V GL+DM+ K R D+ S+
Sbjct: 167 NE-YCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VF++ ++N V+WT MI +Q A E + LF M E ++ TL +++ACA +
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANME 285
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC---GNIRDARSVFDELCSIDLVSWTA 317
L G+ LH ++ G+ ++ + L++MY KC G++ AR +FD++ ++ SWTA
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 318 MIVGYTQSG-YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
MI GY Q G Y ++AL LF PNH T +S L A A L L +G V + ++L
Sbjct: 346 MITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKL 405
Query: 377 GLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPD------ 429
G V N+L+ MYA+ I DAR F+ EK++I++N++I N++ +
Sbjct: 406 GFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELF 465
Query: 430 -----------AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
A T S++S AS+G + G +HA K GL N V AL++ Y++
Sbjct: 466 NEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGL-KLNQSVCNALISMYSR 524
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG+ +SA VF+ M ++N ++W+++I G+ G +L LF ML E V+PNEV + +
Sbjct: 525 CGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAV 584
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
LSACSH G+V EGWK F SM + +P M+HY C+VD+L R+G L EA++F+ +MP +
Sbjct: 585 LSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKA 644
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
D ++ FL C ++ +LG+ K ++E P Y+L+SNLYAS +W V+ +R+
Sbjct: 645 DALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRK 704
Query: 659 LMKQRGLSKSPGCSLVDLD 677
MK++ L K GCS V+++
Sbjct: 705 AMKEKXLIKEAGCSWVEVE 723
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 178/366 (48%), Gaps = 29/366 (7%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T + C + R+ G +H + + ++++S + +L+ +Y KCG A S+F +
Sbjct: 68 TYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLM 127
Query: 308 -CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
S DL+SW+AM+ + + +AL F D ++PN A+ A + +++G
Sbjct: 128 GSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVG 187
Query: 367 RMVHSLGIRLGL--EDYTVINALVDMYAKCHV-IADARYIFETTSEKDVIAWNSIISGLD 423
+ I+ G D V L+DM+ K + A +FE E++ + W +I+ L
Sbjct: 188 DSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLM 247
Query: 424 D-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
PD TL VISACA++ + +G LH+ + + G L+ +
Sbjct: 248 QFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG-LTLDR 306
Query: 467 YVGTALLNFYAKC---GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD-GGGSLALFSD 522
VG L+N YAKC G +AR +FD + + N +W+AMI GY +G +L LF
Sbjct: 307 CVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRG 366
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVDLLARA 581
M+ V PN F++ L AC++ + G + F +++ F V + + ++ + AR+
Sbjct: 367 MILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVAN--SLISMYARS 424
Query: 582 GRLEEA 587
GR+++A
Sbjct: 425 GRIDDA 430
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 61 STGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
+ G + HA +I GL ++ CN L+SMY G+++ A VF+ M + + S+ +I
Sbjct: 492 TIGKGEQIHARVIKSGLKLNQSVCNA-LISMYSRCGNIESAFQVFEDMEDRNVISWTSII 550
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ + +E + M + + + VL AC + ++EG K
Sbjct: 551 TGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWK 599
>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
Length = 813
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 216/618 (34%), Positives = 338/618 (54%), Gaps = 35/618 (5%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLND--LYKDIVEFYKCMRKRLKEHDNFVFSK 151
GH+ A +FD +P+PD ++ +IR Y + D + Y+ M + +N+ F
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
LKAC L D G +H + G D FV T L+DMY KC + + +F ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 211 VVSWTSMIAGYVQNDCAQEGL--VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+V+W +M+AGY + + +L +M+ + N TL +L+ A+ AL QG +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 269 HGYILKIGIEINSH----------LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
H Y ++ + N + L TALLDMY KCG++ AR VFD + + + V+W+A+
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 319 IVGYTQSGYPDKALKLFTDKKWADF-FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
I G+ +A LF F + +IAS L A A L +L MG +H+L + G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------- 425
+ D T N+L+ MYAK +I A +F+ + KD +++++++SG N
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
V PDA T+VS+I AC+ L A+Q G H +GL +S + AL++ YAKC
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL-ASETSICNALIDMYAKC 489
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G +R VF+ M ++ V+W+ MI GYG+ G G + ALF +M N P+ V F +L
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACSH+G+V EG F+ M + P M+HY+CMVDLL+R G L+EA EF+++MP+ D
Sbjct: 550 SACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
V ++ A L C +Y DLG+ + + + EL P+ +VL+SN+Y++ GR+ +VR +
Sbjct: 610 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRII 669
Query: 660 MKQRGLSKSPGCSLVDLD 677
K +G KSPGCS ++++
Sbjct: 670 QKVQGFKKSPGCSWIEIN 687
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 238/514 (46%), Gaps = 40/514 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+A H I GL D +T L+ MY + A +F +MP D ++ M+ Y +
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 125 DLYKDIVEFYKCMR---KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV-------- 173
+Y V M+ RL+ + + + + +L + + +G VH +
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVA-LLPLLAQQGALAQGTSVHAYCIRACLHPNR 263
Query: 174 --KVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
K D +L T L+DMYAKC + +R+VFD +N V+W+++I G+V +
Sbjct: 264 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 323
Query: 231 LVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+LF M +G + ++ S + ACA L L G+ LH + K G+ + +LL
Sbjct: 324 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 383
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY K G I A ++FDE+ D VS++A++ GY Q+G ++A +F + + P+ T
Sbjct: 384 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 443
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTS 408
+ S++ A + L L GR H I GL T I NAL+DMYAKC I +R +F
Sbjct: 444 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 503
Query: 409 EKDVIAWNSIISG--------------LDDN---VSPDAVTLVSVISACASLGAVQVGSS 451
+D+++WN++I+G L+ N PD VT + ++SAC+ G V G
Sbjct: 504 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 563
Query: 452 -LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGM 509
H GL + +++ ++ G A +M + V W A++G +
Sbjct: 564 WFHVMGHGYGLTPRMEHY-ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 622
Query: 510 QG--DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
D G ++ L E N V+ + I SA
Sbjct: 623 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 656
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 7/271 (2%)
Query: 56 LGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L C S L+ HALL G+ D L+SMY G + A ++FD M D
Sbjct: 347 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 406
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ ++ Y N ++ +K M+ E D ++ AC L + G H
Sbjct: 407 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 466
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
++ G ++ + L+DMYAKC I SRQVF+ +++VSW +MIAGY + +E
Sbjct: 467 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 526
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTALLD 289
LF M + +T L++AC+ + +GK W H G+ ++D
Sbjct: 527 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVD 586
Query: 290 MYVKCGNIRDARSVFDEL-CSIDLVSWTAMI 319
+ + G + +A + D+ W A++
Sbjct: 587 LLSRGGFLDEAYEFIQSMPLRADVRVWVALL 617
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMP 107
++L+ C +L + H +I+ GL ++ CN L+ MY G + +R VF+ MP
Sbjct: 445 VSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA-LIDMYAKCGRIDLSRQVFNMMP 503
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ D S+ MI Y ++ L K+ + M D F +L AC + EG
Sbjct: 504 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 561
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 207/587 (35%), Positives = 318/587 (54%), Gaps = 61/587 (10%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA--KCRDIGSSRQVFDETLD 208
++ C E + + + +H ++++ G D F + L+ A + ++QVFD+
Sbjct: 41 LIDQCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPH 97
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE-GNQITLGSLVTACAKLRALHQGKW 267
N+ +W ++I Y + + L++F RM + ++ T L+ A ++L L GK
Sbjct: 98 PNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKA 157
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
HG ++K+ + + ++ +L+ Y KCG + VF + D+VSW +MI + Q G
Sbjct: 158 FHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGC 217
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL--GIRLGLEDYTVIN 385
P++AL+LF + + + PN +T+ VLSA A+ + GR VHS R+G E T+ N
Sbjct: 218 PEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIG-ESLTLSN 276
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVI-------------------------------A 414
A++DMY KC + DA+ +F+ EKD++ A
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAA 336
Query: 415 WNSIISG------------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
WN++IS L PD VTLVS +SACA LGA+ +G +H Y
Sbjct: 337 WNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYI 396
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
KQG+ N ++ T+L++ Y KCGD Q A MVF ++ K+ WSAMI G M G G +
Sbjct: 397 KKQGM-KLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDA 455
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
+ALFS M ++V+PN V FT IL ACSH G+V EG F M + +P +KHY CMVD
Sbjct: 456 IALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVD 515
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
+L RAG LEEA+E +E MP+ P S++GA L C ++ L E +++EL P
Sbjct: 516 ILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGA 575
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD-IANDF 682
YVL+SN+YA G+W RV+ +R+LM+ GL K PGCS +++D I ++F
Sbjct: 576 YVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEF 622
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 240/457 (52%), Gaps = 55/457 (12%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCN-TKLVSMYG--SFGHVKYARSVFDSMP 107
P L+L+ C T LK HA ++ GL D + ++L++ F + YA+ VFD +P
Sbjct: 37 PTLSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96
Query: 108 NPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
+P+ Y++ +IR Y + + ++ ++ F + + + D F F ++KA EL ++ G
Sbjct: 97 HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
H ++KV G D F+L L+ YAKC ++G +VF ++VVSW SMI +VQ
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGG 216
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
C +E L LF M V+ N IT+ +++ACAK G+W+H YI + I + L
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSN 276
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT---------------------- 323
A+LDMY KCG++ DA+ +FD++ D+VSWT M+VGY
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAA 336
Query: 324 ---------QSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLG 373
Q G P +AL+LF + + + P+ VT+ S LSA AQLG +++G +H
Sbjct: 337 WNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYI 396
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------- 422
+ G++ + + +L+DMY KC + A +F + KDV W+++I+GL
Sbjct: 397 KKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAI 456
Query: 423 -------DDNVSPDAVTLVSVISACASLGAVQVGSSL 452
+D V P+AVT +++ AC+ +G V+ G +
Sbjct: 457 ALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTF 493
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 118/240 (49%), Gaps = 4/240 (1%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLK 142
T ++ Y G A+ +FD+MPN D ++ +I Y K+ +E F++ +
Sbjct: 307 TTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTA 366
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
+ D L AC +L +D G +H I K G + + T L+DMY KC D+ +
Sbjct: 367 KPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALM 426
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF K+V W++MIAG + ++ + LF++M+E V+ N +T +++ AC+ +
Sbjct: 427 VFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGL 486
Query: 262 LHQGK-WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS-WTAMI 319
+ +G+ + + L G+ ++D+ + G + +A + +++ S W A++
Sbjct: 487 VEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 546
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 214/654 (32%), Positives = 359/654 (54%), Gaps = 22/654 (3%)
Query: 44 FHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSV 102
F+ PS+ L + +K+ HA +I + ++ + KL+ +Y G + +AR+V
Sbjct: 42 FNQAPSVFSSLLHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNV 101
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
FD P+ MI + N + ++ ++ M E +++ LKAC +L D
Sbjct: 102 FDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDD 161
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
+ GM++ V+ G +V + +V+ K + +++VFD +K+VV W S+I GY
Sbjct: 162 EVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGY 221
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
VQ E + +F M G + + +T+ +L+ AC + G H Y+L +G+ +
Sbjct: 222 VQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDV 281
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
++T+L+DMY G+ A VFD +CS L+SW AMI GY Q+G ++ LF +
Sbjct: 282 FVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQS 341
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADA 400
+ T+ S++ +Q +L GR++HS IR LE + V++ A+VDMY+KC I A
Sbjct: 342 GSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQA 401
Query: 401 RYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASL 443
+F +K+VI W +++ GL N V+ ++VTLVS++ CA L
Sbjct: 402 TIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHL 461
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD-AMREKNTVTWSA 502
G++ G ++HA+ + G + + + +AL++ YAKCG SA +F+ K+ + ++
Sbjct: 462 GSLTKGRTVHAHFIRHGY-AFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNS 520
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI GYGM G G +L ++S M+ E ++PN+ F ++L+ACSH+G+V EG F+SM RD
Sbjct: 521 MIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDH 580
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P KHY C+VDL +RAGRLEEA E ++ MP +P + A L GC + ++G +
Sbjct: 581 DVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQI 640
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+++ L + YV++SN+YA +W VN +R LM+ +G+ K PG SL+++
Sbjct: 641 ADRLISLDYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEV 694
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 212/655 (32%), Positives = 344/655 (52%), Gaps = 26/655 (3%)
Query: 47 LPSIPCLNLLGLCKSTGSL----KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSV 102
L S+ +L+ C S SL K +L + + ++SMYG G +K AR++
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
FDSMP + S+ MI Y + + Y M + D+F F ++K+C L D
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
++H ++K G D L+ MY K + + VF + K+++SW SMIAG+
Sbjct: 216 KLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275
Query: 222 VQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
Q E L F M + + N+ GS +AC+KL G+ +HG +K G+ +
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
+L DMY KCG + AR+VF + DLV+W A+I G+ ++ F+ +
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRH 395
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
PN VT+ S+L A ++ LN G VHS +++G D V N+L+ MY+KC + D
Sbjct: 396 TGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLND 455
Query: 400 ARYIFETTSEK-DVIAWNSIISG-LDDN----------------VSPDAVTLVSVISACA 441
A +FE K D+++WN++++ L N + PD VTL +V+ +
Sbjct: 456 ALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+ + +VGS +H + K GL + ++ V AL+N Y KCG + AR +FD++ + ++WS
Sbjct: 516 QIASYEVGSQIHCFIMKSGL-NLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWS 574
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
++I GY G G + LF M V+PNE+ F IL+ACSH GMV EG K + +M D
Sbjct: 575 SLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQED 634
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
++ P+ +H CMVDLLARAG L+ A +F++ MP PDV ++ L C ++ ++G+
Sbjct: 635 YRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKR 694
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +L++ P + V++ N++AS G W ++R M++ + K PG S +++
Sbjct: 695 AAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEI 749
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 212/655 (32%), Positives = 343/655 (52%), Gaps = 26/655 (3%)
Query: 47 LPSIPCLNLLGLCKSTGSL----KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSV 102
L S+ +L+ C S SL K +L + + ++SMYG G +K AR++
Sbjct: 96 LKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNM 155
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
FDSMP + S+ MI Y + + Y M + D+F F ++K+C L D
Sbjct: 156 FDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDF 215
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
++H ++K G D L+ MY K + + VF + K+++SW SMIAG+
Sbjct: 216 KLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275
Query: 222 VQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
Q E L F M + + N+ GS +AC+KL G+ +HG +K G+ +
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
+L DMY KCG + AR+VF + DLV+W A+I G+ ++ F+ +
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRH 395
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
PN VT+ S+L A ++ LN G VHS +++G D V N+L+ MY+KC + D
Sbjct: 396 TGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLND 455
Query: 400 ARYIFETTSEK-DVIAWNSIISG-LDDN----------------VSPDAVTLVSVISACA 441
A +FE K D+++WN++++ L N + PD VTL +V+ +
Sbjct: 456 ALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+ + +VGS +H + K GL + ++ V AL+N Y KCG + AR +FD++ + ++WS
Sbjct: 516 QIASYEVGSQIHCFIMKSGL-NLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWS 574
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
++I GY G G + LF M V+PNE+ F IL+ACSH GMV EG K + +M D
Sbjct: 575 SLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQED 634
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
++ P+ +H CMVDLLARAG L+ A +F+ MP PDV ++ L C ++ ++G+
Sbjct: 635 YRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKR 694
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +L++ P + V++ N++AS G W ++R M++ + K PG S +++
Sbjct: 695 AAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEI 749
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 223/631 (35%), Positives = 346/631 (54%), Gaps = 24/631 (3%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP-NPDFYSFQVMIRWYFLNDL 126
HA+ + GL+ D LV+MYG FG V AR VFD + + S+ M+ + ND
Sbjct: 123 HAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDR 182
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
D VE + M + F FS V+ AC RD++ G KVH +V+ G D F
Sbjct: 183 CSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANA 242
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
LVDMY+K DI + VF + +VVSW + I+G V + Q L L +M+ + N
Sbjct: 243 LVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPN 302
Query: 246 QITLGSLVTACAKLRALHQG--KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
TL S++ ACA A + +HG+++K + + ++ AL+DMY K G + DAR V
Sbjct: 303 VFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKV 362
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+ + DL+ W A+I G + G ++L LF + N T+A+VL ++A L +
Sbjct: 363 FEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAI 422
Query: 364 NMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+ VH+L ++G L D V+N L+D Y KC+ + A +FE S ++IA+ S+I+ L
Sbjct: 423 SDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITAL 482
Query: 423 DD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+ PD L S+++ACASL A + G +HA+ K+ ++ +
Sbjct: 483 SQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMT-D 541
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
V+ G AL+ YAKCG + A + F + +K V+WSAMIGG G G +L +F M++
Sbjct: 542 VFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVD 601
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
E + PN + T++L AC+H G+V E F SM F + +HY CM+DLL RAG+L+
Sbjct: 602 ERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLD 661
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
+A+E + +MP E + +++GA L ++ +LG++ +K+ L P+K+ +VL++N YA
Sbjct: 662 DAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLLANTYA 721
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
S G W V +VR+LMK + K P S V+L
Sbjct: 722 SAGMWDEVAKVRKLMKDSKVKKEPAMSWVEL 752
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 275/571 (48%), Gaps = 34/571 (5%)
Query: 68 FHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA L+ GL + N L+S Y AR VFD P+P S+ ++ Y N L
Sbjct: 26 IHAHLLKSGLLHAFRN-HLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALP 84
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++ + ++ MR R + F VLK C D G++VH V G D FV L
Sbjct: 85 REALAAFRAMRARGVRCNEFALPIVLK-CAP--DAGLGVQVHAVAVSTGLSGDIFVANAL 141
Query: 187 VDMYAKCRDIGSSRQVFDETL-DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
V MY + +R+VFDE D+N VSW M++ +V+ND + + LF M V N
Sbjct: 142 VAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPN 201
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ +V AC R L G+ +H +++ G + + AL+DMY K G+I A VF
Sbjct: 202 EFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFG 261
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS--ASAQLGNL 363
++ D+VSW A I G G+ AL+L K + PN T++S+L A A G
Sbjct: 262 KVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAF 321
Query: 364 NMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+GR +H I+ +DY + ALVDMYAK ++ DAR +FE KD++ WN++ISG
Sbjct: 322 ALGRQIHGFMIKACADSDDYIGV-ALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISG 380
Query: 422 LD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ + TL +V+ + ASL A+ + +HA + K G LS
Sbjct: 381 CSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSD 440
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ +V L++ Y KC + A VF+ N + +++MI G ++ LF +ML
Sbjct: 441 S-HVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEML 499
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ ++P+ + +++L+AC+ +G + + + KF+ + +V A+ G +
Sbjct: 500 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR-KFMTDVFAGNALVYTYAKCGSI 558
Query: 585 EEALEFMENMPIEPDVS----LFGAFLHGCG 611
E+A +P + VS + G HG G
Sbjct: 559 EDADLAFSGLPDKGVVSWSAMIGGLAQHGHG 589
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/510 (29%), Positives = 234/510 (45%), Gaps = 59/510 (11%)
Query: 165 GMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
G +H ++K G +F L+ Y+KCR GS+R+VFDET D VSW+S++ Y N
Sbjct: 23 GAHIHAHLLKSGLLHAF-RNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNN 81
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+E L F MR V N+ L +V CA L G +H + G+ + +
Sbjct: 82 ALPREALAAFRAMRARGVRCNEFAL-PIVLKCAPDAGL--GVQVHAVAVSTGLSGDIFVA 138
Query: 285 TALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
AL+ MY G + +AR VFDE + VSW M+ + ++ A++LF + W+
Sbjct: 139 NALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGV 198
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
PN + V++A +L GR VH++ +R G + D NALVDMY+K I A
Sbjct: 199 RPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAAL 258
Query: 403 IFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGA 445
+F + DV++WN+ ISG + P+ TL S++ ACA GA
Sbjct: 259 VFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGA 318
Query: 446 VQVGS--SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
+H + K S+ Y+G AL++ YAK G AR VF+ + K+ + W+A+
Sbjct: 319 GAFALGRQIHGFMIK-ACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNAL 377
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC--------------------- 542
I G G G SL+LF M E N +L +
Sbjct: 378 ISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGF 437
Query: 543 ---SH--TGMVGEGWKC----FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE-FME 592
SH G++ WKC + + + ++ + M+ L++ E+A++ FME
Sbjct: 438 LSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFME 497
Query: 593 NMP--IEPDVSLFGAFLHGCGLYSRFDLGE 620
+ +EPD + + L+ C S ++ G+
Sbjct: 498 MLRKGLEPDPFVLSSLLNACASLSAYEQGK 527
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
SP++++ +++ A+ ++ +G+ +HA+ K GLL + LL+FY+KC SAR
Sbjct: 3 SPESIS--PLLTRYAATQSLFLGAHIHAHLLKSGLLHA---FRNHLLSFYSKCRLPGSAR 57
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD + V+WS+++ Y +LA F M V+ NE +L G
Sbjct: 58 RVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG 117
Query: 547 M 547
+
Sbjct: 118 L 118
>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
Length = 813
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 216/618 (34%), Positives = 338/618 (54%), Gaps = 35/618 (5%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLND--LYKDIVEFYKCMRKRLKEHDNFVFSK 151
GH+ A +FD +P+PD ++ +IR Y + D + Y+ M + +N+ F
Sbjct: 71 GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
LKAC L D G +H + G D FV T L+DMY KC + + +F ++
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190
Query: 211 VVSWTSMIAGYVQNDCAQEGL--VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+V+W +M+AGY + + +L +M+ + N TL +L+ A+ AL QG +
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250
Query: 269 HGYILKIGIEINSH----------LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
H Y ++ + N + L TALLDMY KCG++ AR VFD + + + V+W+A+
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310
Query: 319 IVGYTQSGYPDKALKLFTDKKWADF-FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
I G+ +A LF F + +IAS L A A L +L MG +H+L + G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------- 425
+ D T N+L+ MYAK +I A +F+ + KD +++++++SG N
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
V PDA T+VS+I AC+ L A+Q G H +GL +S + AL++ YAKC
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL-ASETSICNALIDMYAKC 489
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G +R VF+ M ++ V+W+ MI GYG+ G G + ALF +M N P+ V F +L
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACSH+G+V EG F+ M + P M+HY+CMVDLL+R G L+EA EF+++MP+ D
Sbjct: 550 SACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
V ++ A L C +Y DLG+ + + + EL P+ +VL+SN+Y++ GR+ +VR +
Sbjct: 610 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRII 669
Query: 660 MKQRGLSKSPGCSLVDLD 677
K +G KSPGCS ++++
Sbjct: 670 QKVQGFKKSPGCSWIEIN 687
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 238/514 (46%), Gaps = 40/514 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+A H I GL D +T L+ MY + A +F +MP D ++ M+ Y +
Sbjct: 145 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 204
Query: 125 DLYKDIVEFYKCMR---KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV-------- 173
+Y V M+ RL+ + + + + +L + + +G VH +
Sbjct: 205 GMYHHAVAHLLSMQMQMHRLRPNASTLVA-LLPLLAQQGALAQGTSVHAYRIRACLHSNR 263
Query: 174 --KVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
K D +L T L+DMYAKC + +R+VFD +N V+W+++I G+V +
Sbjct: 264 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 323
Query: 231 LVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+LF M +G + ++ S + ACA L L G+ LH + K G+ + +LL
Sbjct: 324 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 383
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY K G I A ++FDE+ D VS++A++ GY Q+G ++A +F + + P+ T
Sbjct: 384 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 443
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTS 408
+ S++ A + L L GR H I GL T I NAL+DMYAKC I +R +F
Sbjct: 444 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 503
Query: 409 EKDVIAWNSIISG--------------LDDN---VSPDAVTLVSVISACASLGAVQVGSS 451
+D+++WN++I+G L+ N PD VT + ++SAC+ G V G
Sbjct: 504 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 563
Query: 452 -LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGM 509
H GL + +++ ++ G A +M + V W A++G +
Sbjct: 564 WFHVMRHGYGLTPRMEHY-ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 622
Query: 510 QG--DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
D G ++ L E N V+ + I SA
Sbjct: 623 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 656
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 7/271 (2%)
Query: 56 LGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L C S L+ HALL G+ D L+SMY G + A ++FD M D
Sbjct: 347 LRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDT 406
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ ++ Y N ++ +K M+ E D ++ AC L + G H
Sbjct: 407 VSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGS 466
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
++ G ++ + L+DMYAKC I SRQVF+ +++VSW +MIAGY + +E
Sbjct: 467 VIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEA 526
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTALLD 289
LF M + +T L++AC+ + +GK W H G+ ++D
Sbjct: 527 TALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVD 586
Query: 290 MYVKCGNIRDARSVFDEL-CSIDLVSWTAMI 319
+ + G + +A + D+ W A++
Sbjct: 587 LLSRGGFLDEAYEFIQSMPLRADVRVWVALL 617
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMP 107
++L+ C +L + H +I+ GL ++ CN L+ MY G + +R VF+ MP
Sbjct: 445 VSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA-LIDMYAKCGRIDLSRQVFNMMP 503
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ D S+ MI Y ++ L K+ + M D F +L AC + EG
Sbjct: 504 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 561
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 217/633 (34%), Positives = 336/633 (53%), Gaps = 23/633 (3%)
Query: 66 KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
KA HA L+ G ++ LV++Y G + A+ VF+S+ N D S+ +I Y
Sbjct: 30 KAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQK 89
Query: 125 DL--YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSF 181
Y ++E ++ MR + FS V A + G++ H +K D F
Sbjct: 90 GTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVF 149
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L++MY K + +R+VFD ++N VSW ++I+GY A E LF MR
Sbjct: 150 VGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREE 209
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
++ S+++A +H GK +H LK G+ + + AL+ MY KCG + DA
Sbjct: 210 GAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAL 269
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
F+ D ++W+AMI GY Q+G +AL LF + P+ T V++A + +G
Sbjct: 270 KTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIG 329
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L G+ +H ++ G E + ALVDMYAKC + DAR F+ E D++ W S+IS
Sbjct: 330 ALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMIS 389
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G N + P +T+ SV+ AC+SL A++ G +HA + K G S
Sbjct: 390 GYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGF-S 448
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
V +G+AL YAKCG + +VF M ++ +TW+AMI G G+G +L LF ++
Sbjct: 449 LEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEEL 508
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+ +P+ V F +LSACSH G+V G F M +F VP ++HY CMVD+L+RAG+
Sbjct: 509 RHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGK 568
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L E EF+E+ I+ + L+ L C Y ++LG +K++EL ++ Y+L+S++
Sbjct: 569 LHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSI 628
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y + GR V +VR LMK RG++K PGCS ++L
Sbjct: 629 YTALGRSDDVERVRRLMKLRGVNKEPGCSWIEL 661
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 225/438 (51%), Gaps = 32/438 (7%)
Query: 32 PTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLI-VDGLTNDKCNTKLVSMY 90
P H F + S P ++ G L+A HAL I + + L++MY
Sbjct: 111 PNGHTFSGVFTAASSSP-----------ETFGGLQA-HALAIKTSNFYDVFVGSSLINMY 158
Query: 91 GSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFS 150
G + AR VFD++P + S+ +I Y + + + E + MR+ HD F+++
Sbjct: 159 CKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYT 218
Query: 151 KVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
VL A + G ++HC +K G + V LV MY KC + + + F+ + DK
Sbjct: 219 SVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDK 278
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+ ++W++MI GY Q + E L LF M + ++ T ++ AC+ + AL +GK +H
Sbjct: 279 DDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIH 338
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
GY LK G E + +TAL+DMY KCG++ DAR FD L D+V WT+MI GY Q+G +
Sbjct: 339 GYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENE 398
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
AL L+ + P+ +T+ASVL A + L L G+ +H+ I+ G + + +AL
Sbjct: 399 TALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALS 458
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAV 431
MYAKC + D +F +D++ WN++ISGL N PD V
Sbjct: 459 TMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYV 518
Query: 432 TLVSVISACASLGAVQVG 449
T V+V+SAC+ +G V+ G
Sbjct: 519 TFVNVLSACSHMGLVERG 536
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 201/414 (48%), Gaps = 33/414 (7%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ C + + L +GK +H +L+ G + +L +L+++Y KCG+I A+ VF+ + + D
Sbjct: 16 LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75
Query: 312 LVSWTAMIVGYTQSGYPDKA--LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW +I GY+Q G + ++LF + + PN T + V +A++ G
Sbjct: 76 VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135
Query: 370 HSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------ 422
H+L I+ D V ++L++MY K + DAR +F+T E++ ++W +IISG
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195
Query: 423 -----------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+ + D SV+SA V G +H + K GLLS VG A
Sbjct: 196 FEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSI-ASVGNA 254
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L+ Y KCG A F+ +K+ +TWSAMI GY GD +L LF +M +P+
Sbjct: 255 LVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPS 314
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
E F +++ACS G + EG K + + + +VD+ A+ G L +A +
Sbjct: 315 EFTFVGVINACSDIGALEEG-KQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGF 373
Query: 592 ENMPIEPDVSLFGAFLHGCG----------LYSRFDLGEVMIKKMLELHPDKAC 635
+ + EPD+ L+ + + G LY R + +M ++ +AC
Sbjct: 374 DYLK-EPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRAC 426
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 21/227 (9%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYI 403
P H + +L + +L G+ +H+ +R G + N+LV++YAKC I A+ +
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 404 FETTSEKDVIAWNSIISGLD-------------------DNVSPDAVTLVSVISACASLG 444
FE+ + KDV++WN +I+G +N P+ T V +A +S
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
G HA + K +V+VG++L+N Y K G AR VFD + E+NTV+W+ +I
Sbjct: 128 ETFGGLQAHALAIKTSNF-YDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATII 186
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
GY M+ + LF M EE ++ I+T++LSA + +V G
Sbjct: 187 SGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYG 233
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 220/651 (33%), Positives = 352/651 (54%), Gaps = 27/651 (4%)
Query: 53 LNLLGLCKSTGSLKA---FHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPN 108
L LL C ++ SLK H ++ GL ND K L+++Y S +A+ VFD+M N
Sbjct: 7 LPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMEN 66
Query: 109 P-DFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P + + ++ Y N +Y + +E F K + + D++ + VLKAC L G
Sbjct: 67 PCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGK 126
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+H +VK G D V + LV MYAKC + +F+E +K+V W ++I+ Y Q+
Sbjct: 127 MIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSG 186
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+E L F MR E N +T+ + +++CA+L L++G +H ++ G ++S + +
Sbjct: 187 NFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISS 246
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY KCG++ A VF+++ +V+W +MI GY G ++LF P
Sbjct: 247 ALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKP 306
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA-LVDMYAKCHVIADARYIF 404
T++S++ ++ L G+ VH IR ++ IN+ L+D+Y KC + A IF
Sbjct: 307 TLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIF 366
Query: 405 ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQ 447
+ + V++WN +ISG V PDA+T SV++AC+ L A++
Sbjct: 367 KLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALE 426
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +H ++ L ++ V +G ALL+ YAKCG A VF + +++ V+W++MI Y
Sbjct: 427 KGEEIHNLIIEKKLDNNEVVMG-ALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G G +L LF++ML ++P+ V F ILSAC H G+V EG F M + +P
Sbjct: 486 GSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPR 545
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMP-IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++HY C++DLL RAGRL EA E ++ P I DV L C L+ DLG + + +
Sbjct: 546 VEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTL 605
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
++ PD + Y+L+SN+YAS +W V VR MK+ GL K+PGCS ++++
Sbjct: 606 IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEIN 656
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 217/612 (35%), Positives = 329/612 (53%), Gaps = 52/612 (8%)
Query: 95 HVKYARSVFDSMPNPDF--------YSFQVMIRWYFLNDLYKDIVEFYKCMRKR-LKEHD 145
H + ++ F + P+P F ++ ++I Y N L + Y MR D
Sbjct: 29 HAHFIKTQFHN-PHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALD 87
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
NF+ +LKAC + D G ++H K G D FV L++MY KC + S+R VFD
Sbjct: 88 NFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFD 147
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +++VVSWT+M+ YV++ E L L M+ V+ + + L SL+ L +
Sbjct: 148 QMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKS 207
Query: 265 GKWLHGYILK-IGIE-INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +HGYI++ +G E + + TAL+DMY K G + A+ +FD L +VSWT MI G
Sbjct: 208 GRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGC 267
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
+S D+ K F FPN +T+ S+++ +G L++G+ H+ +R G
Sbjct: 268 IRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSL 327
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDD 424
++ AL+DMY KC + AR +F +KDV W+ +IS L++
Sbjct: 328 ALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNN 387
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+V P+ VT+VS++S CA GA+ +G HAY + GL +V + TAL+N YAKCGD
Sbjct: 388 DVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGL-EVDVILETALINMYAKCGDVTI 446
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR +F+ +++ W+ M+ G+ M G G +L LFS+M + V+PN++ F +I ACSH
Sbjct: 447 ARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSH 506
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+G+ M+HY C+VDLL RAG L+EA +ENMP+ P+ ++G
Sbjct: 507 SGL--------------------MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWG 546
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
A L C L+ LGEV +K+LEL P Y VL SN+YAS RW V VRE M G
Sbjct: 547 ALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSG 606
Query: 665 LSKSPGCSLVDL 676
+ K PG S +++
Sbjct: 607 MKKEPGLSWIEV 618
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 170/589 (28%), Positives = 270/589 (45%), Gaps = 80/589 (13%)
Query: 14 TKKPKLQLRFFSYTNQQTPTQ------HELDQTFASFHS--LPSIPCLNLLGLCK--STG 63
T + L SYTN P H A+ + LPS LL C S+G
Sbjct: 50 TPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPS-----LLKACAQASSG 104
Query: 64 SL-KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW 120
L + H +G +D CN L++MY G + AR VFD MP D S+ M+
Sbjct: 105 DLGRELHGFAQKNGFASDVFVCNA-LMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGC 163
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
Y + + + + + M+ + ++ L D+ G VH IV+ G +
Sbjct: 164 YVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEK 223
Query: 181 F---VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
+ T L+DMY K + S++++FD ++VVSWT MIAG +++ EG FNRM
Sbjct: 224 MEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRM 283
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
E + N+ITL SL+T C + L GKW H Y+L+ G ++ LVTAL+DMY KCG +
Sbjct: 284 LEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQV 343
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
AR++F+ + D+ W+ +I Y D+ LF + D PN+VT+ S+LS
Sbjct: 344 GYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLC 403
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A+ G L++G+ H+ R GLE D + AL++MYAKC + AR +F ++D+ WN
Sbjct: 404 AEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWN 463
Query: 417 SIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++++G V P+ +T VS+ AC+ G ++
Sbjct: 464 TMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME------------ 511
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGD------ 512
+ G L++ + G A + + M + NT+ W A++ + +
Sbjct: 512 -------HYG-CLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEV 563
Query: 513 -----------GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
G L S++ + N+V T++ A SH+GM E
Sbjct: 564 AARKILELDPQNCGYSVLKSNIYASAKRWNDV--TSVREAMSHSGMKKE 610
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 223/659 (33%), Positives = 352/659 (53%), Gaps = 31/659 (4%)
Query: 48 PSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVF 103
P I LL C +G+L K H LI GL D L+++Y G + A S+F
Sbjct: 38 PLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIF 97
Query: 104 DSMPN--PDFYSFQVMIRWYFLNDLYK----DIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
+M + D S+ +I + N + + +C R + ++ + F+ +L++C
Sbjct: 98 RNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNE-YCFTALLRSCS 156
Query: 158 ELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKC-RDIGSSRQVFDETLDKNVVSW 214
G+ + ++K G DS V G L+DM+ K DI S+R VFD+ KN+V+W
Sbjct: 157 NPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTW 216
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
T MI Y Q + + LF R+ ++ TL SL++AC +L GK LH ++++
Sbjct: 217 TLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIR 276
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
G+ + + L+DMY K + ++R +F+ + +++SWTA+I GY QS +A+KL
Sbjct: 277 SGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKL 336
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAK 393
F + PN T +SVL A A L + +G+ +H I+LGL + N+L++MYA+
Sbjct: 337 FCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYAR 396
Query: 394 CHVIADARYIFETTSEKDVIAWNSII----SGLDDN-----------VSPDAVTLVSVIS 438
+ AR F EK++I++N+ LD + V T ++S
Sbjct: 397 SGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASPFTYACLLS 456
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
A +G + G +HA K G +N+ + AL++ Y+KCG+ ++A VF+ M +N +
Sbjct: 457 GAACIGTIVKGEQIHALIVKSGF-GTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVI 515
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
TW+++I G+ G +L LF +ML V+PNEV + +LSACSH G++ E WK F SM
Sbjct: 516 TWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSM 575
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
+ P M+HY CMVDLL R+G L EA+EF+ +MP + D ++ FL C ++ L
Sbjct: 576 HYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKL 635
Query: 619 GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
GE KK+LE P Y+L+SNLYAS+GRW V +R+ MKQ+ L K G S +++D
Sbjct: 636 GEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVD 694
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 208/626 (33%), Positives = 347/626 (55%), Gaps = 38/626 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV++Y G VFD + + S+ +I + ++ +E ++CM E
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 146 NFVFSKVLKACCELRDIDEGM----KVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+F V+ AC L + EG+ +VH ++ G +SF++ LV MY K + SS+
Sbjct: 199 SFTLVSVVTACSNL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+ +++V+W ++++ QN+ E L M VE ++ T+ S++ AC+ L
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 262 LHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L GK LH Y LK G ++ NS + +AL+DMY C + R VFD + + W AMI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 321 GYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY+Q+ + +AL LF ++ A N T+A V+ A + G + +H ++ GL+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------- 421
D V N L+DMY++ I A IF ++D++ WN++I+G
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 422 --LDDNVS---------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
L+ VS P+++TL++++ +CA+L A+ G +HAY+ K L+++V VG+
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAVGS 556
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
AL++ YAKCG Q +R VFD + +KN +TW+ +I YGM G+G ++ L M+ + V+P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
NEV F ++ +ACSH+GMV EG + FY M D+ PS HY C+VDLL RAGR++EA +
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 591 MENMPIE-PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
M MP + + + L +++ ++GE+ + +++L P+ A +YVL++N+Y+S G
Sbjct: 677 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 650 WIRVNQVRELMKQRGLSKSPGCSLVD 675
W + +VR MK++G+ K PGCS ++
Sbjct: 737 WDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 232/476 (48%), Gaps = 36/476 (7%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
K HA + G N LV+MYG G + ++ + S D ++ ++ N+
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD--SFVL 183
+ +E+ + M E D F S VL AC L + G ++H +K G D SFV
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF-V 242
+ LVDMY C+ + S R+VFD D+ + W +MIAGY QN+ +E L+LF M E +
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N T+ +V AC + A + + +HG+++K G++ + + L+DMY + G I A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKAL-----------KLFTDKKWADFFPNHVTIA 351
+F ++ DLV+W MI GY S + + AL K+ PN +T+
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
++L + A L L G+ +H+ I+ L D V +ALVDMYAKC + +R +F+ +K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 411 DVIAWNSIIS--GLDDN---------------VSPDAVTLVSVISACASLGAVQVGSSL- 452
+VI WN II G+ N V P+ VT +SV +AC+ G V G +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTV-TWSAMIGG 506
+ G+ S+ + +++ + G + A + + M R+ N WS+++G
Sbjct: 642 YVMKPDYGVEPSSDHYA-CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 244/507 (48%), Gaps = 43/507 (8%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF-VLTGLVDMYAKCRDIGSSRQV 202
DN+ F +LKA +L+D++ G ++H + K G G DS V LV++Y KC D G+ +V
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL--- 259
FD ++N VSW S+I+ + + L F M + VE + TL S+VTAC+ L
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L GK +H Y L+ G E+NS ++ L+ MY K G + ++ + DLV+W ++
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
Q+ +AL+ + P+ TI+SVL A + L L G+ +H+ ++ G
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
E+ V +ALVDMY C + R +F+ ++ + WN++I+G N
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ ++ T+ V+ AC GA ++H + K+G L + +V L++ Y++
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRL 453
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-----------V 528
G A +F M +++ VTW+ MI GY +L L M N E +
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN + TIL +C+ + +G K ++ + +VD+ A+ G L+ +
Sbjct: 514 KPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 589 EFMENMP----IEPDVSLFGAFLHGCG 611
+ + +P I +V + +HG G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNG 599
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 195/408 (47%), Gaps = 33/408 (8%)
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W ++ V+++ +E ++ + M ++ + +L+ A A L+ + GK +H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 274 KIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
K G ++S V L+++Y KCG+ VFD + + VSW ++I + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLG---NLNMGRMVHSLGIRLGLEDYTVINALVD 389
+ F + P+ T+ SV++A + L L MG+ VH+ G+R G + +IN LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVT 432
MY K +A ++ + + +D++ WN+++S L N V PD T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ SV+ AC+ L ++ G LHAY+ K G L N +VG+AL++ Y C S R VFD M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGE- 550
++ W+AMI GY +L LF M + N ++ AC +G
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 551 ----GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
G+ + RD +FV + ++D+ +R G+++ A+ M
Sbjct: 425 EAIHGFVVKRGLDRD-RFVQN-----TLMDMYSRLGKIDIAMRIFGKM 466
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 207/614 (33%), Positives = 347/614 (56%), Gaps = 30/614 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL---- 141
++M+ FG++ A VF M + +S+ V++ Y + + + C+ R+
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAI----CLYHRMLWVG 190
Query: 142 -KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSS 199
+ D + F VL+ C + D+ G +VH +V+ G D V+ L+ MY KC D+ S+
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R +FD ++++SW +MI+GY +N EGL LF MR V+ + +TL S+++AC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
G+ +H Y++ G ++ + +L MY+ G+ R+A +F + D+VSWT MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMI 370
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY + P+KA+ + P+ +T+A+VLSA A LG+L+ G +H L I+ L
Sbjct: 371 SGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y ++ N L++MY+KC I A IF K+VI+W SII+GL N
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQM 490
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P+A+TL + ++ACA +GA+ G +HA+ + G + + ++ ALL+ Y +CG
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG-VGLDDFLPNALLDMYVRCGRM 549
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A F++ ++K+ +W+ ++ GY +G G + LF M+ V+P+E+ F ++L C
Sbjct: 550 NIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGC 608
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+ MV +G F M ++ P++KHY C+VDLL RAG L+EA +F++ MP+ PD ++
Sbjct: 609 GKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L+ C ++ DLGE+ +++ EL YY+L+ NLYA G+W V +VR +MK+
Sbjct: 668 WGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 663 RGLSKSPGCSLVDL 676
GL+ GCS V++
Sbjct: 728 NGLTVDAGCSWVEV 741
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 212/435 (48%), Gaps = 23/435 (5%)
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
+ G N +E + L N M+E V ++ +LV C RA +G ++ L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
++ L A L M+V+ GN+ DA VF ++ +L SW ++ GY + GY D+A+ L+
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 338 KKW-ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
W P+ T VL + +L GR VH +R G E D V+NAL+ MY KC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVIS 438
+ AR +F+ +D+I+WN++ISG +N V PD +TL SVIS
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
AC LG ++G +HAY G + ++ V +L Y G + A +F M K+ V
Sbjct: 306 ACELLGDRRLGRDIHAYVITTG-FAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIV 364
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
+W+ MI GY ++ + M + V+P+E+ +LSAC+ G + G + + +
Sbjct: 365 SWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKL 423
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
+ + + ++++ ++ +++AL+ N+P + +S + + + G L +R
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLNNRCFE 482
Query: 619 GEVMIKKM-LELHPD 632
+ ++M + L P+
Sbjct: 483 ALIFFRQMKMTLQPN 497
>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 709
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 336/644 (52%), Gaps = 53/644 (8%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK----CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
+S K H I GL + + L Y G V AR +FD + +P + +
Sbjct: 93 RSLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWN 152
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
+I+ Y + D + + M K D + F V+KAC + ++ G+ +H +
Sbjct: 153 AIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVGVLIHGRALV 212
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
G + FV L+ MY C +G +RQVF+ L ++VVSW +MI+G+ QN +E L +
Sbjct: 213 SGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAV 272
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
FN M + VE + T+ S + +C L+ L G +H + K ++ + AL+DMY +
Sbjct: 273 FNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSR 332
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CG I +A VF E D+++WT+MI GY +G AL L + PN VT+AS+
Sbjct: 333 CGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASL 392
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
LSA A +L MYAKC+ ++ + +F TS+K +
Sbjct: 393 LSACA---------------------------SLCYMYAKCNAVSYSFQVFAKTSKKRTV 425
Query: 414 AWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
WN+++SGL N V + T SVI A A L ++ +LH+Y
Sbjct: 426 PWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYL 485
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM--REKNTVTWSAMIGGYGMQGDGG 514
+ G +S + V T L++ Y+KCG A +FD + +EK+ + WS +I GYGM G G
Sbjct: 486 VRSGFIS-KIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGE 544
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
++ LF+ M++ +QPNE+ FT++L ACSH G+V +G F M ++ P HY C+
Sbjct: 545 TAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCV 604
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
VDLL RAGRL+EA + +++MP + + S++GA L C ++ +LGEV +++ EL P+
Sbjct: 605 VDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELGEVAAERLFELEPEST 664
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDI 678
Y+L++N+YA+ GRW VR +M + GL K+P S V + +
Sbjct: 665 GNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSVGVAV 708
>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 726
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 214/641 (33%), Positives = 350/641 (54%), Gaps = 27/641 (4%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKCN---TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
CK +LK HA L+V N+ + TKL+S Y F ++ A SVF + P+ S+
Sbjct: 38 CKDLRTLKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWN 97
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR-DIDEGMKVHCEIVK 174
+++R + L + + YK MR+ + D F F + +A L+ D+ G VHC+ +K
Sbjct: 98 LIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMK 157
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
+G G D + ++++YA+C + R +FDE +++VSWTSMI+GYV L
Sbjct: 158 LGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFEL 217
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
FN+MR +E N +TL ++ C +G+ LH YI+K G+ I + ++L MY
Sbjct: 218 FNKMRLE-MEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSI 276
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
G+ ++ S+F E+ D++SW +I Y G ++ + F + + + T+ V
Sbjct: 277 TGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMR-GEVALSSETLTLV 335
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
+S A++GNL G +HS I++GL D ++ +L+D YAKC + ++ +F +
Sbjct: 336 ISVFAKIGNLVEGEKLHSFSIKVGLCDDVLLASLLDFYAKCGELRNSVQLFGEIPCRSSS 395
Query: 414 AWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
W ++SG N V A L S++ AC+ LG++Q+ +H Y
Sbjct: 396 TWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYL 455
Query: 457 TKQG---LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
T+ L N+++GT++LN Y +CG SAR F+ M K+ +TW++MI GYG+ G
Sbjct: 456 TRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDNITWTSMIEGYGIHGMA 515
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+L LF+ ML E V PN V F ++LSACSH+G++ +G + F SM F P + HY C
Sbjct: 516 IEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGCELFLSMKWVFGMEPDLDHYTC 575
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
MVDLL R G+++EAL + M + D ++GA + C ++ +GE +++LE+ D
Sbjct: 576 MVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRVHGDKKVGEFAAQRLLEMESDN 635
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
YY L+SN+ A G+W V QVR+++ ++ L K+PG S +
Sbjct: 636 VGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWSCI 676
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 208/626 (33%), Positives = 348/626 (55%), Gaps = 38/626 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV++Y G VFD + + S+ +I + ++ +E ++CM E
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 146 NFVFSKVLKACCELRDIDEGM----KVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+F V+ AC L + EG+ +VH ++ G +SF++ LV MY K + SS+
Sbjct: 199 SFTLVSVVTACSNL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+ +++V+W ++++ QN+ E L M VE ++ T+ S++ AC+ L
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 262 LHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L GK LH Y LK G ++ NS + +AL+DMY C + R VFD + + W AMI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 321 GYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY+Q+ + +AL LF ++ A N T+A V+ A + G + +H ++ GL+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------- 421
D V N L+DMY++ I A IF ++D++ WN++I+G
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 422 --LDDNVS---------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
L+ VS P+++TL++++ +CA+L A+ G +HAY+ K L+++V VG+
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAVGS 556
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
AL++ YAKCG Q +R VFD + +KN +TW+ +I YGM G+G ++ L M+ + V+P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
NEV F ++ +ACSH+GMV EG + FY M D+ PS HY C+VDLL RAGR++EA +
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 591 MENMPIEPD-VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
M MP + + + + L +++ ++GE+ + +++L P+ A +YVL++N+Y+S G
Sbjct: 677 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 650 WIRVNQVRELMKQRGLSKSPGCSLVD 675
W + +VR MK++G+ K PGCS ++
Sbjct: 737 WDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 232/476 (48%), Gaps = 36/476 (7%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
K HA + G N LV+MYG G + ++ + S D ++ ++ N+
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD--SFVL 183
+ +E+ + M E D F S VL AC L + G ++H +K G D SFV
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF-V 242
+ LVDMY C+ + S R+VFD D+ + W +MIAGY QN+ +E L+LF M E +
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N T+ +V AC + A + + +HG+++K G++ + + L+DMY + G I A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKAL-----------KLFTDKKWADFFPNHVTIA 351
+F ++ DLV+W MI GY S + + AL K+ PN +T+
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
++L + A L L G+ +H+ I+ L D V +ALVDMYAKC + +R +F+ +K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 411 DVIAWNSIIS--GLDDN---------------VSPDAVTLVSVISACASLGAVQVGSSL- 452
+VI WN II G+ N V P+ VT +SV +AC+ G V G +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTV-TWSAMIGG 506
+ G+ S+ + +++ + G + A + + M R+ N WS+++G
Sbjct: 642 YVMKPDYGVEPSSDHYA-CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 244/507 (48%), Gaps = 43/507 (8%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF-VLTGLVDMYAKCRDIGSSRQV 202
DN+ F +LKA +L+D++ G ++H + K G G DS V LV++Y KC D G+ +V
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL--- 259
FD ++N VSW S+I+ + + L F M + VE + TL S+VTAC+ L
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L GK +H Y L+ G E+NS ++ L+ MY K G + ++ + DLV+W ++
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
Q+ +AL+ + P+ TI+SVL A + L L G+ +H+ ++ G
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
E+ V +ALVDMY C + R +F+ ++ + WN++I+G N
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ ++ T+ V+ AC GA ++H + K+G L + +V L++ Y++
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRL 453
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-----------V 528
G A +F M +++ VTW+ MI GY +L L M N E +
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN + TIL +C+ + +G K ++ + +VD+ A+ G L+ +
Sbjct: 514 KPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 589 EFMENMP----IEPDVSLFGAFLHGCG 611
+ + +P I +V + +HG G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNG 599
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 195/408 (47%), Gaps = 33/408 (8%)
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W ++ V+++ +E ++ + M ++ + +L+ A A L+ + GK +H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 274 KIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
K G ++S V L+++Y KCG+ VFD + + VSW ++I + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLG---NLNMGRMVHSLGIRLGLEDYTVINALVD 389
+ F + P+ T+ SV++A + L L MG+ VH+ G+R G + +IN LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVT 432
MY K +A ++ + + +D++ WN+++S L N V PD T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ SV+ AC+ L ++ G LHAY+ K G L N +VG+AL++ Y C S R VFD M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGE- 550
++ W+AMI GY +L LF M + N ++ AC +G
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 551 ----GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
G+ + RD +FV + ++D+ +R G+++ A+ M
Sbjct: 425 EAIHGFVVKRGLDRD-RFVQN-----TLMDMYSRLGKIDIAMRIFGKM 466
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 216/630 (34%), Positives = 344/630 (54%), Gaps = 27/630 (4%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA I GL +N + L++MY ++ A+ VFD++ + + M+ Y N
Sbjct: 372 HAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYA 431
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGL 186
+++ + MR D F ++ +L AC L ++ G ++H I+K + FV L
Sbjct: 432 SKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTL 491
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VDMYAKC + +RQ F+ +++ VSW ++I GYVQ + E +F RM + ++
Sbjct: 492 VDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDE 551
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L S+++ CA L+AL QG+ +H +++K G++ + ++L+DMYVKCG I AR VF
Sbjct: 552 VSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSC 611
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ S +VS A+I GY Q+ + A+ LF + + P+ +T AS+L A LN+G
Sbjct: 612 MPSRSVVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLG 670
Query: 367 RMVHSLGIRLGL---EDYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGL 422
R +H L + GL D+ ++ LV MY DA +F E K I W +IISG
Sbjct: 671 RQIHCLIQKRGLLYDGDFLGVSLLV-MYMNSQRKTDADILFSEFQYPKSTILWTAIISGH 729
Query: 423 D-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+N PD T SV+ AC+ L ++ G +H+ GL S+
Sbjct: 730 TQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGL-DSD 788
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQGDGGGSLALFSDML 524
G+A+++ YAKCGD +S+ VF+ M KN V +W++MI G+ G +L +F +M
Sbjct: 789 ELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMK 848
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ ++P++V F +L+ACSH G V EG + F M +K VP + H CM+DLL R G L
Sbjct: 849 HTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFL 908
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA EF++ + EP+ ++ L C ++ G +K++EL P+ + YVL+SN+Y
Sbjct: 909 KEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYVLLSNIY 968
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
A+ G W VN VR M+++GL K PGCS +
Sbjct: 969 AASGNWDEVNSVRRAMREKGLRKLPGCSWI 998
Score = 248 bits (634), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 186/695 (26%), Positives = 333/695 (47%), Gaps = 97/695 (13%)
Query: 5 SLLQRHVSRTKKPKLQLRFFSYTNQQ---TPTQHELDQTFASFHSLPSIPCLNLLGLCKS 61
S +QR V++T + K+ QQ +H D+T P L ++
Sbjct: 51 STIQRQVNQTSEHKIFTHLLKICLQQCQRIKIRHPFDET-------PQ-------RLAQA 96
Query: 62 TGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW 120
+ + K HA + G + + + +V +Y G+V++A F+ + D ++ ++
Sbjct: 97 SRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSM 156
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-D 179
Y + ++ + ++ + F ++ VL +C L DID G +VHC ++K+G +
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
SF L+DMY+KC + +R++FD +D + VSWT+MIAGYVQ +E L +F M++
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
+ +Q+ +++TAC L G + D
Sbjct: 277 LGLVPDQVAFVTVITACVGL-----------------------------------GRLDD 301
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A +F ++ + ++V+W MI G+ + G +A+ F + T+ SVLSA A
Sbjct: 302 ACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIAS 361
Query: 360 LGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L LN G +VH+ I+ GL + ++L++MYAKC + A+ +F+ E++++ WN++
Sbjct: 362 LEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAM 421
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ G N PD T S++SACA L +++G LH++ K
Sbjct: 422 LGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHN- 480
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
N++V L++ YAKCG + AR F+ +R ++ V+W+A+I GY + D + +F
Sbjct: 481 FEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFR 540
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMV--GEGWKCFY--SMCRDFKFVPSMKHYVCMVDL 577
M+ + + P+EV +ILS C++ + GE CF S + + S ++D+
Sbjct: 541 RMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGS-----SLIDM 595
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV--MIKKMLE--LHPDK 633
+ G +E A MP VS+ A + G Y++ DL E + ++M L+P +
Sbjct: 596 YVKCGAIEAARYVFSCMPSRSVVSM-NAIIAG---YAQNDLVEAIDLFQEMQNEGLNPSE 651
Query: 634 ACYYVLVSNLYASDGRWIRVN---QVRELMKQRGL 665
+ L L A G + ++N Q+ L+++RGL
Sbjct: 652 ITFASL---LDACTGPY-KLNLGRQIHCLIQKRGL 682
Score = 239 bits (609), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 270/534 (50%), Gaps = 66/534 (12%)
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H + +K G G + + +VD+YAKC ++ + + F++ +++++W S+++ Y +
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
++ + F ++ V NQ T ++++CA+L + GK +H ++K+G E NS +
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGS 222
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+DMY KCG++ DAR +FD + D VSWTAMI GY Q G P++ALK+F D + P+
Sbjct: 223 LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPD 282
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFET 406
V +V++A LG L+ DA +F
Sbjct: 283 QVAFVTVITACVGLGRLD----------------------------------DACDLFVQ 308
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
+V+AWN +ISG V TL SV+SA ASL A+ G
Sbjct: 309 MPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYG 368
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA + KQG L+SNVYVG++L+N YAKC ++A+ VFDA+ E+N V W+AM+GGY
Sbjct: 369 LLVHAQAIKQG-LNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQ 427
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G + LFS+M P+E +T+ILSAC+ + G + +S F ++
Sbjct: 428 NGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMG-RQLHSFIIKHNFEYNLF 486
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML-- 627
+VD+ A+ G LEEA + E + +VS + A + G D M ++M+
Sbjct: 487 VENTLVDMYAKCGALEEARQQFEFIRNRDNVS-WNAIIVGYVQEEDEDEAFNMFRRMILD 545
Query: 628 ELHPDKACYYVLVS---NLYASDGRWIRVNQVRELMKQRGLSKS--PGCSLVDL 676
+ PD+ ++S NL A + + QV + + GL G SL+D+
Sbjct: 546 GIAPDEVSLASILSGCANLQALE----QGEQVHCFLVKSGLQTCLYAGSSLIDM 595
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 365 bits (937), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 202/600 (33%), Positives = 340/600 (56%), Gaps = 27/600 (4%)
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VF +M D ++ M+ WY + Y + + ++ M K + F V A + D
Sbjct: 56 VFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVGD 115
Query: 162 IDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
++ ++K+G D FV++ + MYA+ + R+VFD L+K+ W +MI
Sbjct: 116 FKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMI 175
Query: 219 AGYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
G++QN+ EG+ LF M+ + +T S +TA ++L+ L G+ +H + +K
Sbjct: 176 GGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHT 235
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
++ ++ A+L MY +C +++ + VF+++ D+VSW MI G+ Q+G ++ L L +
Sbjct: 236 VLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYE 295
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVI 397
+ F + VT+ S+LSA++ L N +G+ H+ IR G++ + + L+DMYAK +I
Sbjct: 296 MQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMDSYLIDMYAKSGLI 355
Query: 398 ADARYIFETTS--EKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVIS 438
++ +FE + +D WN++I+G L+ N+ P+AVTL S++
Sbjct: 356 RISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILP 415
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
AC+SLG++ +G LH S + L N++V TAL++ Y+K G A VF E+N+V
Sbjct: 416 ACSSLGSINLGKQLHGVSIRYSL-DQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSV 474
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
T++ MI GYG G G +L+LF M +QP+ + F +LSACS+ G+V EG + F SM
Sbjct: 475 TYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESM 534
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV-SLFGAFLHGCGLYSRFD 617
RDFK PS HY C+ D+L R GR+ EA EF++ + E V ++G+ L C L+ +
Sbjct: 535 KRDFKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIE 594
Query: 618 LGEVMIKKMLELHP-DK-ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
LGE + ++LE++ D+ A Y VL+SN+YA + W V+++R+ M+++GL K GCS +D
Sbjct: 595 LGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSMREKGLRKEVGCSWID 654
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 232/432 (53%), Gaps = 32/432 (7%)
Query: 48 PS-IPCLNLLGLCKSTGSLKAFHALL-IVDGLTNDKCN-----TKLVSMYGSFGHVKYAR 100
PS + +N+ S G K + L ++ L N+ N + +SMY G + R
Sbjct: 98 PSPVSFVNVFPAISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCR 157
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDLY-KDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
VFDS + MI + N+ + + + F + M+ D+ F L A +L
Sbjct: 158 KVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQL 217
Query: 160 RDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
+ + G ++H +K S VL ++ MY++C + +S +VF++ +K+VVSW +MI
Sbjct: 218 QCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMI 277
Query: 219 AGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
+G++QN +EGL+L M ++GF+ + +T+ SL++A + LR GK H Y+++ GI
Sbjct: 278 SGFIQNGLDEEGLMLVYEMQKQGFI-ADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGI 336
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFD--ELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
+ + + + L+DMY K G IR ++ VF+ + + D +W A+I GYTQ+G ++A F
Sbjct: 337 KFDG-MDSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITF 395
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKC 394
+ PN VT+AS+L A + LG++N+G+ +H + IR L ++ V ALVDMY+K
Sbjct: 396 RLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKS 455
Query: 395 HVIADARYIFETTSEKDVIAWNSII-----SGLDDN------------VSPDAVTLVSVI 437
I A +F +SE++ + + ++I G+ +N + PDA+T V+V+
Sbjct: 456 GAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVL 515
Query: 438 SACASLGAVQVG 449
SAC+ G V G
Sbjct: 516 SACSYAGLVDEG 527
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/524 (25%), Positives = 239/524 (45%), Gaps = 67/524 (12%)
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VF ++V++W +M++ YV+ + E + F M + ++ + ++ ++ A + +
Sbjct: 55 KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114
Query: 261 ALHQGKWLHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L+G +LK+G E + L V++ + MY + G + R VFD W M
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTM 174
Query: 319 IVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-L 376
I G+ Q+ + + LF K + VT S L+A +QL L +G+ +H+ ++
Sbjct: 175 IGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNH 234
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------- 425
+ TV+NA++ MY++C+ + + +FE EKDV++WN++ISG N
Sbjct: 235 TVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVY 294
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
D+VT+ S++SA ++L ++G HAY + G+ + + L++ YAK
Sbjct: 295 EMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG--MDSYLIDMYAKS 352
Query: 480 GDAQSARMVFD--AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
G + ++ VF+ ++ ++ TW+A+I GY G + F ML + ++PN V +
Sbjct: 353 GLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLAS 412
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL------------- 584
IL ACS G + G K + + + ++ +VD+ +++G +
Sbjct: 413 ILPACSSLGSINLG-KQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSER 471
Query: 585 ------------------EEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
E AL +M I+PD F A L C D G +
Sbjct: 472 NSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIF 531
Query: 624 KKM---LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
+ M ++ P A Y + L GR RV + E +KQ G
Sbjct: 532 ESMKRDFKIQPSTAHYCCVADML----GRVGRVIEAYEFVKQLG 571
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 229/483 (47%), Gaps = 49/483 (10%)
Query: 29 QQTPTQHEL--DQTFASFHSLPSIPCLNLLGLCKSTGSLKAF----HALLIVDGLTNDKC 82
Q T+H + D TF S +L ++ L LGL + + AF H +L V L
Sbjct: 193 QAMKTEHTILDDVTFLS--ALTAVSQLQCLGLGQQ---MHAFTMKNHTVLSVTVL----- 242
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N LV MY V+ + VF+ MP D S+ MI + N L ++ + M+K+
Sbjct: 243 NAILV-MYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGF 301
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG----GPDSFVLTGLVDMYAKCRDIGS 198
D+ + +L A LR+ + G + H +++ G G DS+ L+DMYAK I
Sbjct: 302 IADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGMDSY----LIDMYAKSGLIRI 357
Query: 199 SRQVFDET--LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
S++VF+ +++ +W ++IAGY QN ++ + F M E + N +TL S++ AC
Sbjct: 358 SQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPAC 417
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ L +++ GK LHG ++ ++ N + TAL+DMY K G I A SVF + + V++T
Sbjct: 418 SSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYT 477
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-RMVHSLGIR 375
MI+GY Q G + AL LF K + P+ +T +VLSA + G ++ G R+ S+
Sbjct: 478 TMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRD 537
Query: 376 LGLEDYTVINALV-DMYAKC-HVIADARYIFETTSEKDVIA-WNSIISGLDDNVSPDAVT 432
++ T V DM + VI ++ + E VI W S+
Sbjct: 538 FKIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSL-------------- 583
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ AC G +++G + + + L N YA+ + ++ + +M
Sbjct: 584 ----LGACRLHGHIELGEEVSNRLLEMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSM 639
Query: 493 REK 495
REK
Sbjct: 640 REK 642
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 215/649 (33%), Positives = 356/649 (54%), Gaps = 22/649 (3%)
Query: 49 SIPC-LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSM 106
+ PC L GL K H L I +G + +V MY + AR +FD M
Sbjct: 182 TFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRM 241
Query: 107 PN-PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P D S+ MI Y N + + + M+K + + F L+AC + I +G
Sbjct: 242 PEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQG 301
Query: 166 MKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
M +H ++K + FV L+ MYA+ +G + +F D + +SW SM++G+VQN
Sbjct: 302 MFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQN 361
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E L ++ MR+ + + + + S++ A A+ G +H Y +K G++ + +
Sbjct: 362 GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVG 421
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+L+DMY K +++ +FD++ D+VSWT +I G+ Q+G +AL+LF + +
Sbjct: 422 NSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGID 481
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
+ + I+S+L A + L ++ + +HS IR GL D + N +VD+Y +C + A +F
Sbjct: 482 LDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMF 541
Query: 405 ETTSEKDVIAWNSIIS-----GL------------DDNVSPDAVTLVSVISACASLGAVQ 447
E KDV++W S+IS GL + V PD+++LVS++SA ASL A++
Sbjct: 542 ELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALK 601
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +H + ++G + T L++ YA+CG + +R VF+ +R K+ V W++MI Y
Sbjct: 602 KGKEIHGFLIRKGFVLEGSLAST-LVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAY 660
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GM G G ++ LF M +E + P+ + F +L ACSH+G++ EG + SM +++ P
Sbjct: 661 GMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPW 720
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+HY C+VDLL RA LEEA +F++ M +EP ++ A L C ++S +LGE+ +K+L
Sbjct: 721 PEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLL 780
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
E+ P+ YVLVSN+Y+++ RW V VR MK GL K+PGCS +++
Sbjct: 781 EMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEV 829
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 186/609 (30%), Positives = 308/609 (50%), Gaps = 37/609 (6%)
Query: 29 QQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIV-DGLTNDK-CNTKL 86
Q+P+Q LD+ ++S L L G K+ + HA +I + L N +T+L
Sbjct: 69 NQSPSQFSLDEAYSSV--------LELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRL 120
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
V MYG G + A +FD MP+ +++ MI Y N +E Y+ MR D
Sbjct: 121 VFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDA 180
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLTGLVDMYAKCRDIGSSRQVFDE 205
F +LKAC L+D G +VH +K G FV +V MY KC D+ +RQ+FD
Sbjct: 181 CTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLFDR 240
Query: 206 TLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+K +VVSW SMI+ Y N + E L LF M++ + N T + + AC + Q
Sbjct: 241 MPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQ 300
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G ++H +LK IN + AL+ MY + G + +A ++F + D +SW +M+ G+ Q
Sbjct: 301 GMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQ 360
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +AL+ + + + A P+ V + S+++ASA+ GN G +H+ ++ GL+ D V
Sbjct: 361 NGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQV 420
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
N+LVDMYAK + IF+ +KDV++W +II+G N +
Sbjct: 421 GNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGI 480
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D + + S++ AC+ L + +H+Y ++GL S++ + +++ Y +CG+ A
Sbjct: 481 DLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL--SDLVLQNGIVDVYGECGNVDYAA 538
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F+ + K+ V+W++MI Y G +L LF M V+P+ + +ILSA +
Sbjct: 539 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 598
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA---LEFMENMPIEPDVSLF 603
+ +G + + R FV +VD+ AR G LE++ F+ N + S+
Sbjct: 599 ALKKGKEIHGFLIRK-GFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMI 657
Query: 604 GAF-LHGCG 611
A+ +HGCG
Sbjct: 658 NAYGMHGCG 666
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 122/297 (41%), Gaps = 59/297 (19%)
Query: 405 ETTSEKDVIAWNSI------ISGLDDNVSPDAVTL----VSVISACASLGAVQVGSSLHA 454
ET S +++ S+ ++ L N SP +L SV+ C S A+ G +HA
Sbjct: 43 ETPSLREICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHA 102
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+ L ++V++ T L+ Y KCG A +FD M K TW+AMIG Y G+
Sbjct: 103 HMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIGAYVTNGEPL 162
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWKCF-------- 555
GSL L+ +M + + F IL AC H + EG+
Sbjct: 163 GSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIV 222
Query: 556 --YSMCRD-------FKFVPSMKHYV---CMVDLLARAGRLEEALEF---MENMPIEPDV 600
Y+ C D F +P + V M+ + G+ EAL M+ + P+
Sbjct: 223 GMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNT 282
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD--KACYY--VLVSN----LYASDGR 649
F A L C S IK+ + +H K+ YY V V+N +YA G+
Sbjct: 283 YTFVAALQACEDSS-------FIKQGMFIHATVLKSSYYINVFVANALIAMYARFGK 332
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 343/638 (53%), Gaps = 29/638 (4%)
Query: 66 KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPN--PDFYSFQVMIRWYF 122
+ HA ++ G +++ +++Y H+ +A ++FDS+ + D S+ +I +
Sbjct: 31 RTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFS 90
Query: 123 LNDLYKD----IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
N I F + MR + + V A L D+ G + H VK G
Sbjct: 91 QNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCS 150
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D +V + L++MY K + +R++FD ++N VSW +MI+GY +D A + + +F M
Sbjct: 151 GDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELM 210
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R N+ L S+++A ++ G+ +H +K G+ + AL+ MY KCG++
Sbjct: 211 RREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSL 270
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
DA F+ + ++W+AM+ GY Q G DKALKLF + P+ T+ V++A
Sbjct: 271 DDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINAC 330
Query: 358 AQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ L + G+ +HS +LG L+ Y V++A+VDMYAKC +ADAR FE + DV+ W
Sbjct: 331 SDLCAVVEGKQMHSFAFKLGFGLQLY-VLSAVVDMYAKCGSLADARKGFECVQQPDVVLW 389
Query: 416 NSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
SII+G N V P+ +T+ SV+ AC+SL A+ G +HA K
Sbjct: 390 TSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIK 449
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G V +G+AL Y KCG ++F M ++ ++W+AMI G G G +L
Sbjct: 450 YGF-KLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALE 508
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF ML E ++P+ V F +LSACSH G+V GW+ F M +F P ++HY CMVD+L
Sbjct: 509 LFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDIL 568
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
+RAG+L EA EF+E+ ++ + L+ L C + ++LG +K++EL ++ YV
Sbjct: 569 SRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYV 628
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L+S++Y + G V +VR +MK RG++K PGCS ++L
Sbjct: 629 LLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIEL 666
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 207/416 (49%), Gaps = 41/416 (9%)
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL--V 313
C + + +G+ LH ILK G + ++ L++Y K ++ A ++FD + D V
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80
Query: 314 SWTAMIVGYTQSGYPDK---ALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMV 369
SW ++I ++Q+ A+ LF A + PN T+A V SA++ L ++ G+
Sbjct: 81 SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-DDNVS 427
HS+ ++ G D V ++L++MY K + DAR +F+ E++ ++W ++ISG +++
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 428 PDAV----------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
AV L SV+SA S V G +H+ + K GLL+ V V A
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAI-VSVANA 259
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L+ YAKCG A F+ +KN++TWSAM+ GY GD +L LF+ M + V P+
Sbjct: 260 LVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPS 319
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALE 589
E +++ACS V EG K +S FK ++ YV +VD+ A+ G L +A +
Sbjct: 320 EFTLVGVINACSDLCAVVEG-KQMHSFA--FKLGFGLQLYVLSAVVDMYAKCGSLADARK 376
Query: 590 FMENMPIEPDVSLF----------GAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
E + +PDV L+ G + G LY + + V+ ++ +AC
Sbjct: 377 GFECVQ-QPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRAC 431
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 202/574 (35%), Positives = 322/574 (56%), Gaps = 57/574 (9%)
Query: 161 DIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYA--KCRDIGSSRQVFDETLDK--NVVSWT 215
DI ++H I+K G ++ F + L++ A RD+ + +F + N+ W
Sbjct: 37 DIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWN 96
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
++I + L LF++M + N T SL +CAK +A H+ K LH + LK+
Sbjct: 97 TLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKL 156
Query: 276 GIEINSHLVTALLDMYVKCGNIR-------------------------------DARSVF 304
+ ++ H+ T+L+ MY + G +R DAR +F
Sbjct: 157 ALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLF 216
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
DE+ + D+VSW AMI GY QSG ++AL FT + AD PN T+ SVLSA L +L
Sbjct: 217 DEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLE 276
Query: 365 MGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-- 421
+G+ + S G ++ ++NALVDMY+KC I AR +F+ +KDVI WN++I G
Sbjct: 277 LGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYC 336
Query: 422 ---------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK--QGLLS- 463
L +NV+P+ VT ++V+ ACASLGA+ +G +HAY K +G +
Sbjct: 337 HLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNV 396
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+NV + T+++ YAKCG + A VF +M ++ +W+AMI G M G +L LF +M
Sbjct: 397 NNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEM 456
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+NE QP+++ F +LSAC+ G V G + F SM +D+ P ++HY CM+DLLAR+G+
Sbjct: 457 INEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGK 516
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
+EA M NM +EPD +++G+ L+ C ++ + + GE + +++ EL P+ + YVL+SN+
Sbjct: 517 FDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNI 576
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YA GRW V ++R + +G+ K PGC+ +++D
Sbjct: 577 YAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEID 610
Score = 221 bits (564), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 171/615 (27%), Positives = 276/615 (44%), Gaps = 97/615 (15%)
Query: 32 PTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSM- 89
P H L + + L + P LNLL C SLK H+L+I GL N +KL+
Sbjct: 8 PFVHFLPSSDPPYKLLENHPHLNLLAKCPDIPSLKQIHSLIIKSGLHNTLFAQSKLIEFC 67
Query: 90 -YGSFGHVKYARSVFDSMPN--PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
+ YA S+F S+ + P+ + + +IR + L + + M ++
Sbjct: 68 ALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNS 127
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC------------ 193
F + K+C + + E ++H +K+ V T L+ MY++
Sbjct: 128 HTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDK 187
Query: 194 ---RD----------------IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
RD + +R++FDE K+VVSW +MIAGYVQ+ +E L F
Sbjct: 188 STLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACF 247
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
RM+E V NQ T+ S+++AC LR+L GKW+ ++ G N LV AL+DMY KC
Sbjct: 248 TRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKC 307
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G I AR +FD + D++ W MI GY ++AL LF + PN VT +VL
Sbjct: 308 GEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVL 367
Query: 355 SASAQLGNLNMGRMVHS-----LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSE 409
A A LG L++G+ VH+ L + + ++ +++ MYAKC + A +F +
Sbjct: 368 PACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGS 427
Query: 410 KDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSL 452
+ + +WN++ISGL ++ PD +T V V+SAC G V++G
Sbjct: 428 RSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRY 487
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
+ K +S + +++ A+ G A+++
Sbjct: 488 FSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVL------------------------ 523
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK-HY 571
M N E++P+ I+ ++L+AC G V G Y R F+ P Y
Sbjct: 524 ----------MGNMEMEPDGAIWGSLLNACRIHGQVEFG---EYVAERLFELEPENSGAY 570
Query: 572 VCMVDLLARAGRLEE 586
V + ++ A AGR ++
Sbjct: 571 VLLSNIYAGAGRWDD 585
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 154/516 (29%), Positives = 233/516 (45%), Gaps = 66/516 (12%)
Query: 5 SLLQRHVSRTKKPKLQLRFFS-------YTNQQT-----------PTQHELDQTFA---- 42
+L++ H S T P L FS Y N T HE Q A
Sbjct: 97 TLIRAH-SLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALK 155
Query: 43 -SFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLT-NDKCN-TKLVSMYGSFGHVKYA 99
+ H P + +L+ + G L+ HA L+ D T D + T L++ Y S GHV A
Sbjct: 156 LALHLHPHVHT-SLIHMYSQVGELR--HARLVFDKSTLRDAVSFTALITGYVSEGHVDDA 212
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
R +FD +P D S+ MI Y + +++ + + M++ + VL AC L
Sbjct: 213 RRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHL 272
Query: 160 RDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
R ++ G + + G G + ++ LVDMY+KC +IG++R++FD DK+V+ W +MI
Sbjct: 273 RSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMI 332
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK---- 274
GY +E LVLF M V N +T +++ ACA L AL GKW+H YI K
Sbjct: 333 GGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKG 392
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
G N L T+++ MY KCG + A VF + S L SW AMI G +G+ ++AL L
Sbjct: 393 TGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGL 452
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVD 389
F + F P+ +T VLSA Q G + +G M GI L+ Y ++D
Sbjct: 453 FEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHY---GCMID 509
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVG 449
+ A+ +A+ + + PD S+++AC G V+ G
Sbjct: 510 LLARSGKFDEAKVLMGNM-----------------EMEPDGAIWGSLLNACRIHGQVEFG 552
Query: 450 S-------SLHAYSTKQGLLSSNVYVGTALLNFYAK 478
L ++ +L SN+Y G + AK
Sbjct: 553 EYVAERLFELEPENSGAYVLLSNIYAGAGRWDDVAK 588
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 365 bits (936), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 208/626 (33%), Positives = 347/626 (55%), Gaps = 38/626 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV++Y G VFD + + S+ +I + ++ +E ++CM E
Sbjct: 52 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 111
Query: 146 NFVFSKVLKACCELRDIDEGM----KVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+F V+ AC L + EG+ +VH ++ G +SF++ LV MY K + SS+
Sbjct: 112 SFTLVSVVTACSNL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 170
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+ +++V+W ++++ QN+ E L M VE ++ T+ S++ AC+ L
Sbjct: 171 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 230
Query: 262 LHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L GK LH Y LK G ++ NS + +AL+DMY C + R VFD + + W AMI
Sbjct: 231 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 290
Query: 321 GYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY+Q+ + +AL LF ++ A N T+A V+ A + G + +H ++ GL+
Sbjct: 291 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 350
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------- 421
D V N L+DMY++ I A IF ++D++ WN++I+G
Sbjct: 351 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 410
Query: 422 --LDDNVS---------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
L+ VS P+++TL++++ +CA+L A+ G +HAY+ K L+++V VG+
Sbjct: 411 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAVGS 469
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
AL++ YAKCG Q +R VFD + +KN +TW+ +I YGM G+G ++ L M+ + V+P
Sbjct: 470 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 529
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
NEV F ++ +ACSH+GMV EG + FY M D+ PS HY C+VDLL RAGR++EA +
Sbjct: 530 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 589
Query: 591 MENMPIE-PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
M MP + + + L +++ ++GE+ + +++L P+ A +YVL++N+Y+S G
Sbjct: 590 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 649
Query: 650 WIRVNQVRELMKQRGLSKSPGCSLVD 675
W + +VR MK++G+ K PGCS ++
Sbjct: 650 WDKATEVRRNMKEQGVRKEPGCSWIE 675
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 232/476 (48%), Gaps = 36/476 (7%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
K HA + G N LV+MYG G + ++ + S D ++ ++ N+
Sbjct: 135 KQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 194
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD--SFVL 183
+ +E+ + M E D F S VL AC L + G ++H +K G D SFV
Sbjct: 195 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 254
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF-V 242
+ LVDMY C+ + S R+VFD D+ + W +MIAGY QN+ +E L+LF M E +
Sbjct: 255 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 314
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N T+ +V AC + A + + +HG+++K G++ + + L+DMY + G I A
Sbjct: 315 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 374
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKAL-----------KLFTDKKWADFFPNHVTIA 351
+F ++ DLV+W MI GY S + + AL K+ PN +T+
Sbjct: 375 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 434
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEK 410
++L + A L L G+ +H+ I+ L D V +ALVDMYAKC + +R +F+ +K
Sbjct: 435 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 494
Query: 411 DVIAWNSIIS--GLDDN---------------VSPDAVTLVSVISACASLGAVQVGSSL- 452
+VI WN II G+ N V P+ VT +SV +AC+ G V G +
Sbjct: 495 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 554
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTV-TWSAMIGG 506
+ G+ S+ + +++ + G + A + + M R+ N WS+++G
Sbjct: 555 YVMKPDYGVEPSSDHY-ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 609
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 244/507 (48%), Gaps = 43/507 (8%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF-VLTGLVDMYAKCRDIGSSRQV 202
DN+ F +LKA +L+D++ G ++H + K G G DS V LV++Y KC D G+ +V
Sbjct: 9 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 68
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL--- 259
FD ++N VSW S+I+ + + L F M + VE + TL S+VTAC+ L
Sbjct: 69 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 128
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L GK +H Y L+ G E+NS ++ L+ MY K G + ++ + DLV+W ++
Sbjct: 129 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 187
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
Q+ +AL+ + P+ TI+SVL A + L L G+ +H+ ++ G
Sbjct: 188 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 247
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
E+ V +ALVDMY C + R +F+ ++ + WN++I+G N
Sbjct: 248 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 307
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ ++ T+ V+ AC GA ++H + K+G L + +V L++ Y++
Sbjct: 308 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRL 366
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-----------V 528
G A +F M +++ VTW+ MI GY +L L M N E +
Sbjct: 367 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 426
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN + TIL +C+ + +G K ++ + +VD+ A+ G L+ +
Sbjct: 427 KPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 485
Query: 589 EFMENMP----IEPDVSLFGAFLHGCG 611
+ + +P I +V + +HG G
Sbjct: 486 KVFDQIPQKNVITWNVIIMAYGMHGNG 512
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 184/382 (48%), Gaps = 37/382 (9%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDA 300
++ + +L+ A A L+ + GK +H ++ K G ++S V L+++Y KCG+
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
VFD + + VSW ++I + AL+ F + P+ T+ SV++A + L
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 361 G---NLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
L MG+ VH+ G+R G + +IN LV MY K +A ++ + + +D++ WN+
Sbjct: 126 PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 185
Query: 418 IISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
++S L N V PD T+ SV+ AC+ L ++ G LHAY+ K G
Sbjct: 186 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 245
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
L N +VG+AL++ Y C S R VFD M ++ W+AMI GY +L LF
Sbjct: 246 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 305
Query: 521 SDMLNEE---VQPNEVIFTTILSACSHTGMVGE-----GWKCFYSMCRDFKFVPSMKHYV 572
M EE + N ++ AC +G G+ + RD +FV +
Sbjct: 306 IGM--EESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD-RFVQN----- 357
Query: 573 CMVDLLARAGRLEEALEFMENM 594
++D+ +R G+++ A+ M
Sbjct: 358 TLMDMYSRLGKIDIAMRIFGKM 379
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 214/673 (31%), Positives = 358/673 (53%), Gaps = 42/673 (6%)
Query: 33 TQHELDQTFASFHSLPSI--PCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSM 89
T+H+ D +LP + C LL L G + H + L +D L++M
Sbjct: 95 TEHKPDN-----FTLPCVIKACAGLLDL----GLGQIIHGMATKMDLVSDVFVGNALIAM 145
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV- 148
YG G V+ A VF+ MP + S+ +I + N + E + R+ L ++FV
Sbjct: 146 YGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ---ESFNAFREMLVGEESFVP 202
Query: 149 ----FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
VL C DI++GM VH VK+G + V L+DMY+KCR + ++ +F
Sbjct: 203 DVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLF 262
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR--EGFVEGNQITLGSLVTACAKLRA 261
D+ KN+VSW SMI GY + + L +M+ + ++ ++ T+ +++ C +
Sbjct: 263 DKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSE 322
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L K LHGY + G++ N + A + Y +CG + + VFD + + + SW A++ G
Sbjct: 323 LQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCG 382
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Y Q+ P KAL L+ + P+ TI S+L A +++ +L+ G +H +R GL D
Sbjct: 383 YAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVD 442
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
+ +L+ +Y C A+ +F+ + +++WN +I+G L
Sbjct: 443 PFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLS 502
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
D + P + ++ V AC+ L A+++G LH ++ K L+ +++V +++++ YAK G
Sbjct: 503 DGIQPYEIAIMCVCGACSQLSALRLGKELHCFALK-AHLTEDIFVSSSIIDMYAKGGCIG 561
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
++ +FD +REK+ +W+ +I GYG+ G G +L LF ML ++P++ FT IL ACS
Sbjct: 562 LSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACS 621
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G+V +G + F M P ++HY C+VD+L RAGR+++AL +E MP +PD ++
Sbjct: 622 HAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIW 681
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
+ L C ++ LGE + K+LEL P+K YVL+SNL+A G+W V +VR MK
Sbjct: 682 SSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDI 741
Query: 664 GLSKSPGCSLVDL 676
GL K GCS +++
Sbjct: 742 GLQKDAGCSWIEV 754
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 159/583 (27%), Positives = 284/583 (48%), Gaps = 43/583 (7%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
NT++++MY G +R VFD + + + + ++ Y N+L++D + + + +
Sbjct: 37 NTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELIS-VT 95
Query: 143 EH--DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
EH DNF V+KAC L D+ G +H K+ D FV L+ MY KC + +
Sbjct: 96 EHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEA 155
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM---REGFVEGNQITLGSLVTAC 256
+VF+ ++N+VSW S+I G+ +N QE F M E FV + TL +++ C
Sbjct: 156 VKVFEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVP-DVATLVTVLPVC 214
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A + +G +HG +K+G+ + +L+DMY KC + +A+ +FD+ ++VSW
Sbjct: 215 AGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWN 274
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWAD--FFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+MI GY + + L + D + TI +VL + L + +H
Sbjct: 275 SMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSW 334
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------ 421
R GL+ + V NA + Y +C + + +F+ K V +WN+++ G
Sbjct: 335 RHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALD 394
Query: 422 -----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
D + PD T+ S++ AC+ + ++ G +H ++ + G L+ + ++G +LL+ Y
Sbjct: 395 LYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG-LAVDPFIGISLLSLY 453
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
CG +A+++FD M ++ V+W+ MI GY G ++ LF ML++ +QP E+
Sbjct: 454 ICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIM 513
Query: 537 TILSACSHTGM--VGEGWKCF---YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
+ ACS +G+ CF + D FV S ++D+ A+ G + +
Sbjct: 514 CVCGACSQLSALRLGKELHCFALKAHLTEDI-FVSS-----SIIDMYAKGGCIGLSQRIF 567
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPD 632
+ + E DV+ + + G G++ R + +KML L PD
Sbjct: 568 DRLR-EKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPD 609
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 221/419 (52%), Gaps = 28/419 (6%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGP--DSFVL-TGLVDMYAKCRDIGSSRQVFDETLD 208
+L+AC + +DI+ G ++H E+V + FVL T ++ MY+ C SR VFD+
Sbjct: 4 LLQACGQRKDIEVGRRLH-EMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV-EGNQITLGSLVTACAKLRALHQGKW 267
KN+ W ++++ Y +N+ ++ + +F+ + + + TL ++ ACA L L G+
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG K+ + + + AL+ MY KCG + +A VF+ + +LVSW ++I G++++G+
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182
Query: 328 PDKALKLFTDKKWAD--FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVI 384
++ F + + F P+ T+ +VL A ++ G VH L ++LGL E+ V
Sbjct: 183 LQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVN 242
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------------DDN 425
N+L+DMY+KC +++A+ +F+ +K++++WNS+I G D
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ D T+++V+ C +Q LH YS + G L SN V A + Y +CG S+
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHG-LQSNELVANAFIAAYTRCGALCSS 361
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
VFD M K +W+A++ GY D +L L+ M + + P+ ++L ACS
Sbjct: 362 ERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
++ AC ++VG LH + ++ + T ++ Y+ CG +RMVFD +R K
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLN-EEVQPNEVIFTTILSACSHTGMVGEGWKC 554
N W+A++ Y ++++FS++++ E +P+ ++ AC+ +G G +
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLG-QI 122
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+ M V + ++ + + G +EEA++ E+MP
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP 163
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 226/721 (31%), Positives = 360/721 (49%), Gaps = 101/721 (14%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDG---------------------LTNDKCNTKLVSMYGS 92
+LL CKS ++ H +I G ++ T +V+ Y +
Sbjct: 42 SLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLA 101
Query: 93 FGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
G YA V + + P+P + + ++IR + + M + D+F
Sbjct: 102 CGATDYALLVLERVTPSPAVW-WNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPH 160
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK- 209
VLKAC EL G H I G + F+ LV MY++C + + +FDE +
Sbjct: 161 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 220
Query: 210 --NVVSWTSMIAGYVQNDCAQEGLVLFNRM------REGFVEGNQITLGSLVTACAKLRA 261
+V+SW S+++ +V++ A L LF++M + + I++ +++ AC L+A
Sbjct: 221 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 280
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD---------------- 305
+ Q K +HG ++ G + + AL+D Y KCG + +A VF+
Sbjct: 281 VPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 340
Query: 306 -------------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
E +D+V+WTA+I GY+Q G +AL LF ++ PN
Sbjct: 341 YSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPN 400
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-----------EDYTVINALVDMYAKCH 395
VTI SVLSA A LG + G +H+ ++ L ED V NAL+DMY+KC
Sbjct: 401 CVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 460
Query: 396 VIADARYIFE--TTSEKDVIAWNSIISGL----DDN---------------VSPDAVTLV 434
AR IF+ E++V+ W +I G D N V+P+A T+
Sbjct: 461 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 520
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALLNFYAKCGDAQSARMVFDAMR 493
++ ACA L A+++G +HAY + S+ Y V L++ Y+KCGD +AR VFD+M
Sbjct: 521 CILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS 580
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+K+ ++W++M+ GYGM G G +L +F M P+++ F +L ACSH GMV +G
Sbjct: 581 QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS 640
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F SM D+ P +HY C +DLLAR+GRL++A +++MP+EP ++ A L C ++
Sbjct: 641 YFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 700
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
S +L E + K++E++ + Y L+SN+YA+ GRW V ++R LMK+ G+ K PGCS
Sbjct: 701 SNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSW 760
Query: 674 V 674
V
Sbjct: 761 V 761
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 216/506 (42%), Gaps = 83/506 (16%)
Query: 50 IPCLNLLGLC---KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDS 105
I +N+L C K+ K H I +G D L+ Y G ++ A VF+
Sbjct: 266 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNM 325
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR------------------------- 140
M D S+ M+ Y + ++ E +K MRK
Sbjct: 326 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 385
Query: 141 LKEHDNFVFS----------KVLKACCELRDIDEGMKVHCEIVK---------VGGPDS- 180
L +FS VL AC L +G ++H +K GG D
Sbjct: 386 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 445
Query: 181 -FVLTGLVDMYAKCRDIGSSRQVFDETL--DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
V L+DMY+KCR ++R +FD+ ++NVV+WT MI G+ Q + + L LF M
Sbjct: 446 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 505
Query: 238 -REGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVT-ALLDMYVK 293
E + V N T+ ++ ACA L A+ GK +H Y+L+ E +++ V L+DMY K
Sbjct: 506 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 565
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CG++ AR VFD + +SWT+M+ GY G +AL +F + A F P+ +T V
Sbjct: 566 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 625
Query: 354 LSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS 408
L A + G ++ G M G+ E Y +D+ A+ S
Sbjct: 626 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYA---CAIDLLAR--------------S 668
Query: 409 EKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ AW ++ D + P AV V+++SAC V++ HA + + + N
Sbjct: 669 GRLDKAWRTV---KDMPMEPTAVVWVALLSACRVHSNVELAE--HALNKLVEMNAENDGS 723
Query: 469 GTALLNFYAKCGDAQSARMVFDAMRE 494
T + N YA G + + M++
Sbjct: 724 YTLISNIYATAGRWKDVARIRHLMKK 749
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 32/302 (10%)
Query: 46 SLPSIPCLNLLGLCKSTGSLKAF------HA------LLIVD----GLTND-KCNTKLVS 88
SLP+ C+ ++ + + SL AF HA LL +D G D L+
Sbjct: 397 SLPN--CVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 454
Query: 89 MYGSFGHVKYARSVFDSMP--NPDFYSFQVMI----RWYFLNDLYKDIVEFYKCMRKRLK 142
MY K ARS+FD +P + ++ VMI ++ ND K VE
Sbjct: 455 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS--EPYGV 512
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS---FVLTGLVDMYAKCRDIGSS 199
+ + S +L AC L I G ++H +++ +S FV L+DMY+KC D+ ++
Sbjct: 513 APNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTA 572
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R VFD K+ +SWTSM+ GY + E L +F++MR+ + IT ++ AC+
Sbjct: 573 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 632
Query: 260 RALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA-RSVFDELCSIDLVSWTA 317
+ QG + G+ + +D+ + G + A R+V D V W A
Sbjct: 633 GMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVA 692
Query: 318 MI 319
++
Sbjct: 693 LL 694
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 202/614 (32%), Positives = 329/614 (53%), Gaps = 23/614 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ LV++Y ++ AR V + MP D + + ++ V+ + MR
Sbjct: 28 SSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIR 87
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
+ F+F+ ++ A L D G +H + K G D + V MY K + + + Q
Sbjct: 88 LNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQF 147
Query: 203 FDETLDKNVVSWTSMIAGYVQND-CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
F + +N+ S ++++G+ + C Q +L + EGF E N T S++ CA
Sbjct: 148 FKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGF-EPNMYTFISILKTCASKGD 206
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L++GK +HG ++K GI +SHL +L+++Y KCG+ A VF E+ D+VSWTA+I G
Sbjct: 207 LNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITG 266
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
+ GY L++F F PN T S+L + + L ++++G+ VH+ ++ L+
Sbjct: 267 FVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGN 325
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------D 423
+ ALVDMYAK + DA IF ++D+ AW I++G
Sbjct: 326 DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQR 385
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ V P+ TL S +S C+ + + G LH+ + K G S +++V +AL++ YAKCG +
Sbjct: 386 EGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQ-SGDMFVASALVDMYAKCGCVE 444
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A +VFD + ++TV+W+ +I GY G GG +L F ML+E P+EV F +LSACS
Sbjct: 445 DAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACS 504
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G++ EG K F S+ + + P+++HY CMVD+L RAG+ E F+E M + +V ++
Sbjct: 505 HMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIW 564
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
L C ++ + GE K+ EL P+ Y+L+SN++A+ G W V VR LM R
Sbjct: 565 ETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTR 624
Query: 664 GLSKSPGCSLVDLD 677
G+ K PGCS V+++
Sbjct: 625 GVKKEPGCSWVEVN 638
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 208/427 (48%), Gaps = 19/427 (4%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
PDS + + LV++Y KC + +RQV +E ++V W ++ QE + LF M
Sbjct: 22 PDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLM 81
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R + NQ SL++A A L H G+ +H + K G E + + A + MY+K ++
Sbjct: 82 RHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSV 141
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+ F + +L S ++ G+ + D+ ++ F PN T S+L
Sbjct: 142 ENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTC 201
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A G+LN G+ +H I+ G+ D + N+LV++YAKC A +F E+DV++W
Sbjct: 202 ASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWT 261
Query: 417 SIISG----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
++I+G L + +P+ T +S++ +C+SL V +G +HA K
Sbjct: 262 ALITGFVAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNS 321
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
L N +VGTAL++ YAK + A +F+ + +++ W+ ++ GY G G ++ F
Sbjct: 322 -LDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCF 380
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
M E V+PNE + LS CS + G + +SM M +VD+ A+
Sbjct: 381 IQMQREGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAK 439
Query: 581 AGRLEEA 587
G +E+A
Sbjct: 440 CGCVEDA 446
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 207/410 (50%), Gaps = 37/410 (9%)
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
LRA + K + ++K GI +SHL ++L+++YVKC +++ AR V +E+ D+ W
Sbjct: 2 LRAKYILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQK 61
Query: 319 IVGYTQSGYP-DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
+ S YP +A++LF + N AS++SA+A LG+ + G +H+ + G
Sbjct: 62 L-SSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYG 120
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS--------- 427
E D + NA V MY K + + F+ +++ + N+++SG D +
Sbjct: 121 FESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILI 180
Query: 428 --------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
P+ T +S++ CAS G + G ++H K G ++ + ++ +L+N YAKC
Sbjct: 181 QLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSG-INPDSHLWNSLVNVYAKC 239
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G A A VF + E++ V+W+A+I G+ +G G G L +F+ ML E PN F +IL
Sbjct: 240 GSANYACKVFGEIPERDVVSWTALITGFVAEGYGSG-LRIFNQMLAEGFNPNMYTFISIL 298
Query: 540 SACSHTGMVGEGWKCFYSMCRDF----KFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+CS V G + + ++ FV + +VD+ A+ LE+A E + N
Sbjct: 299 RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGT-----ALVDMYAKNRFLEDA-ETIFNRL 352
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD--KACYYVLVSNL 643
I+ D+ + + G Y++ GE +K +++ + K + L S+L
Sbjct: 353 IKRDLFAWTVIVAG---YAQDGQGEKAVKCFIQMQREGVKPNEFTLASSL 399
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 155/319 (48%), Gaps = 11/319 (3%)
Query: 66 KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA ++ + L ND T LV MY ++ A ++F+ + D +++ V++ Y +
Sbjct: 311 KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQD 370
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+ V+ + M++ + + F + L C + +D G ++H +K G D FV
Sbjct: 371 GQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVA 430
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ LVDMYAKC + + VFD + ++ VSW ++I GY Q+ + L F M +
Sbjct: 431 SALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTV 490
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKI-GIEINSHLVTALLDMYVKCGNIRDARS 302
+++T +++AC+ + + +GK + KI GI ++D+ + G + S
Sbjct: 491 PDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVES 550
Query: 303 VFDEL-CSIDLVSWTAMIVGYTQSGYPD----KALKLFTDKKWADFFPNHVTIASVLSAS 357
+E+ + +++ W ++ G + A+KLF + D N++ ++++ +A
Sbjct: 551 FIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEID--SNYILLSNMFAAK 608
Query: 358 AQLGNL-NMGRMVHSLGIR 375
++ N+ ++ + G++
Sbjct: 609 GMWDDVTNVRALMSTRGVK 627
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 217/651 (33%), Positives = 356/651 (54%), Gaps = 27/651 (4%)
Query: 52 CLNLLG---LCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
C +LLG +S K HAL++ G+ ++ +KL + Y H YA +FD +
Sbjct: 14 CESLLGKFSASQSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLS 73
Query: 108 NPDFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P +S+ M+R Y + + + F + + D F + V+KAC +L ID G+
Sbjct: 74 QPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGV 133
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+H + K G D+FV L+ MY + +++ VFD ++ V+SW +MI GY +N+
Sbjct: 134 GIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNN 193
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
CA++ + ++ RM + VE + T+ S++ AC L+ + G+ +H + + G N +
Sbjct: 194 CAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRN 253
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMYVKCG +++A + + D+V+WT +I GY +G AL L + P
Sbjct: 254 ALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKP 313
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIF 404
N V+IAS+LSA L LN G+ +H+ IR +E ++ AL++MYAKC+ + +F
Sbjct: 314 NSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVF 373
Query: 405 ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQ 447
TS+K WN+++SG N V PD T S++ A A L +Q
Sbjct: 374 MGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQ 433
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD--AMREKNTVTWSAMIG 505
++H Y + G L + V + L++ Y+KCG A +F+ ++++K+ + WSA+I
Sbjct: 434 QAMNIHCYLIRSGFLY-RLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIA 492
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
YG G G ++ LF+ M+ V+PN V FT++L ACSH G+V EG+ F M + + +
Sbjct: 493 AYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQII 552
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
+ HY CM+DLL RAGRL +A + MPI P+ +++GA L C ++ +LGEV +
Sbjct: 553 SHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARW 612
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+L P+ YVL++ LYA+ GRW +VR+++ + GL K P SL+++
Sbjct: 613 TFKLEPENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGLRKLPAHSLIEV 663
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 206/555 (37%), Positives = 318/555 (57%), Gaps = 31/555 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCR-----DIGSSRQVF 203
F L+ C ++ + + +H I+K LT + A C D + +
Sbjct: 25 FLSTLQTCKSIKGLKQ---IHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLL 81
Query: 204 DETLDKNVVSWTSMIAGY-VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
+ N+ + ++I G N+ + EGLV++ +M + + T+ ++ ACA+ RA+
Sbjct: 82 AQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAV 141
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+G+ +HG +K+G+ + ++ L+ MY C IR AR VFD DLVSWT MI GY
Sbjct: 142 REGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGY 201
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR---LGLE 379
+ G+ + + LF + + + +T+ VLS+ A+LG+L +GR +H IR + L
Sbjct: 202 VKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNL- 260
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
D V NALVDMY KC AR +F+ K+V++WNS+ISGL
Sbjct: 261 DVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQ 320
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V PD VTLV+V+++CA+LG +++G +HAY + + ++ ++G AL++ YAKCG
Sbjct: 321 RLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQI-RADGFIGNALVDMYAKCGSI 379
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A VF AM K+ +++AMI G M G GG +L LFS+M ++P+EV F +L+AC
Sbjct: 380 DQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTAC 439
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH G+V EG K F M + P ++HY CMVDLL RAG + EA EF+ NMPIEPD +
Sbjct: 440 SHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFV 499
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
GA L C ++ + +LGE ++KK+ ++ P K YVL+SN+Y+S RW ++R+ MK+
Sbjct: 500 LGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKE 559
Query: 663 RGLSKSPGCSLVDLD 677
R L K+PGCS ++LD
Sbjct: 560 RNLEKTPGCSSIELD 574
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 172/575 (29%), Positives = 278/575 (48%), Gaps = 76/575 (13%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTND---KCNTKLVSMYGSFGHV--KYARSVFDSMP 107
L+ L CKS LK HA +I + D +T+L ++ + +YA S+ +
Sbjct: 26 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 85
Query: 108 NPDFYSFQVMIRWYFL--NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P+ + +IR ND + +V YK M + DN+ VLKAC E R + EG
Sbjct: 86 TPNLPLYNAIIRGLATSNNDSIEGLV-VYKQMLSKGIVPDNYTIPFVLKACAESRAVREG 144
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+VH + +K+G D +V L+ MYA C I S+R+VFD + +++VSWT+MI GYV+
Sbjct: 145 EEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKM 204
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK-IGIEINSHL 283
A+EG+ LF M ++ + +TL ++++CA+L L G+ LH YI++ + ++ +
Sbjct: 205 GFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFV 264
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
AL+DMY+KCG+ AR VF E+ ++VSW +MI G Q G ++L +F +
Sbjct: 265 GNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGV 324
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P+ VT+ +VL++ A LG L +G+ VH+ R + D + NALVDMYAKC I A +
Sbjct: 325 KPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACW 384
Query: 403 IFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGA 445
+F+ + KDV ++ ++I GL + PD VT V V++AC+ +G
Sbjct: 385 VFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGL 444
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
V+ G R F+ M +
Sbjct: 445 VEEG------------------------------------RKYFEDM--STIYNLRPQLE 466
Query: 506 GYGMQGDGGGSLALFSD----MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
YG D G L ++ + N ++P+ + +L AC G V G S+ +
Sbjct: 467 HYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELG----ESVMKK 522
Query: 562 FKFVPSMKH--YVCMVDLLARAGRLEEALEFMENM 594
+ + K YV M ++ + A R +AL+ + M
Sbjct: 523 IEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 557
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 225/669 (33%), Positives = 355/669 (53%), Gaps = 98/669 (14%)
Query: 64 SLKAFHALL---IVDGLTNDK-CNTKLV--SMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
+LK F+ +L I+ G +D ++L+ S F + Y+ +FD + N + + + M
Sbjct: 53 NLKQFNRILSQMILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTM 112
Query: 118 IRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK-VHCEIVKVG 176
+R Y ++ + + YK M K DN+ + V++AC +R ++ G K +H ++KVG
Sbjct: 113 MRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACA-VRLLEFGGKEIHDHVLKVG 171
Query: 177 -GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
D +V L++MYA C ++ +R++FDE+ + VSW S++AGYV+ +E ++F+
Sbjct: 172 FDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFD 231
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
+M + N + S++ K+ G
Sbjct: 232 QMP----QRNIVASNSMIVLLGKM-----------------------------------G 252
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+ +A +F+E+ D+VSW+A+I GY Q+G ++AL +F + + V + SVLS
Sbjct: 253 QVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLS 312
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYA---------------------- 392
A A L + G+M+H L IR+G+E Y + NAL+ MY+
Sbjct: 313 ACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQIS 372
Query: 393 ---------KCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
KC + AR +F+ EKD+++W+++ISG + +
Sbjct: 373 WNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQI 432
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD LVSVISAC L A+ G +HAY K G L NV +GT LL+ Y KCG ++A
Sbjct: 433 RPDETILVSVISACTHLAALDQGKWVHAYIRKNG-LKVNVILGTTLLDMYMKCGCVENAL 491
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ M EK +W+A+I G + G SL +FS+M N V PNE+ F +L AC H G
Sbjct: 492 EVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG 551
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG F SM P++KHY CMVDLL RAG L EA + +E+MP+ PDV+ +GA
Sbjct: 552 LVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGAL 611
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C + ++GE + +K++EL PD ++VL+SN++AS G W V +VR +MKQ+G+
Sbjct: 612 LGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVV 671
Query: 667 KSPGCSLVD 675
K+PGCSL++
Sbjct: 672 KTPGCSLIE 680
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 364 bits (935), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 212/613 (34%), Positives = 334/613 (54%), Gaps = 26/613 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T + YG G + YA+ +F+ MP D S+ +I Y N D +E + M +
Sbjct: 91 TTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLREGF 150
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
++ +C I +G +H +K G D V L MYAKC D+ ++
Sbjct: 151 PPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEV 210
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F+E +K VSW +MI Y QN E +++F +M++ VE N +T+ SL++A A L +
Sbjct: 211 LFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLSANAHLDS 270
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
H Y++K G ++ ++T+L+ Y CGNI A +++ + +LVS TAMI G
Sbjct: 271 TH------CYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISG 324
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-ED 380
Y + G ++ FT P+ V + S+L + G +H+ G++ GL D
Sbjct: 325 YAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCAD 384
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDNV--------- 426
V+N L+ MY+K I +F EK +I+WNS+IS G +
Sbjct: 385 CLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRM 444
Query: 427 ---SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
SPDA+T+ S+++ C+ +G +Q G LH Y + L + ++ TAL++ Y KCG +
Sbjct: 445 YGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMED-FLETALVDMYIKCGRLE 503
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
SA VF +++E TW+ MI GYG+ G +L+ +S+M + ++P+ + F +LSAC+
Sbjct: 504 SAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACT 563
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G+V EG + F SM DF +P ++H CMVDLL+RAG LEEA+ F++NM +EPD +++
Sbjct: 564 HGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIW 623
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
GA L C ++ LGE + K++L L YVL+SNLYAS GRW V +VR++MK
Sbjct: 624 GALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVARVRKMMKDT 683
Query: 664 GLSKSPGCSLVDL 676
G S G SL+++
Sbjct: 684 GGDGSSGISLIEV 696
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 239/484 (49%), Gaps = 35/484 (7%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-RE 239
++ T +D Y K I ++ +F+E ++VVSW ++I GY +N + L +F +M RE
Sbjct: 89 YLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLRE 148
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
GF Q TL LV +C + + QGK +HG+ +K G++++ + AL MY KC +++
Sbjct: 149 GFPP-CQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQA 207
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A +F+E+ VSW MI Y Q+G D+A+ +F + N+VTI S+LSA+A
Sbjct: 208 AEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLSANAH 267
Query: 360 LGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L + H I+ G D +VI +LV YA C I A ++ ++++++ ++
Sbjct: 268 LDS------THCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAM 321
Query: 419 ISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
ISG L + PDAV +VS++ + G +HAY K GL
Sbjct: 322 ISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGL 381
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
+ + V L++ Y+K GD ++ +F M EK ++W+++I G ++ LF
Sbjct: 382 CADCLVV-NGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFC 440
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLA 579
M P+ + ++L+ CS G + G + + R+ M+ ++ +VD+
Sbjct: 441 QMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRN---NLDMEDFLETALVDMYI 497
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYY 637
+ GRLE A +++ EP ++ + + G GL +M E L PD+ +
Sbjct: 498 KCGRLESAERVFKSIK-EPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFL 556
Query: 638 VLVS 641
++S
Sbjct: 557 GVLS 560
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 169/335 (50%), Gaps = 30/335 (8%)
Query: 240 GFVEGNQITLGSLVTACAKLRALH-----QGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
G N++++ V RAL + + ++ K G +L TA LD Y K
Sbjct: 42 GLEASNEVSVVLWVKFAVGTRALDANTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKL 101
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G I A+ +F+E+ D+VSW A+I GY+++GY AL++F F P T+ ++
Sbjct: 102 GCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLV 161
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
+ + + G+ +H GI+ GL+ D V NAL MYAKC + A +FE EK +
Sbjct: 162 PSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEV 221
Query: 414 AWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
+WN++I N V + VT++S++SA A L S H Y
Sbjct: 222 SWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLSANAHL------DSTHCYV 275
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K G +++ V T+L+ YA CG+ +SA ++++ M ++N V+ +AMI GY +G+ G
Sbjct: 276 IKTG-FATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLV 334
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+ F+ ML +++P+ V +IL + +G G
Sbjct: 335 VECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSG 369
>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
Length = 787
Score = 364 bits (934), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 331/610 (54%), Gaps = 49/610 (8%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++MY + A +FD MP + SF +I+ Y + + + +E + + + E +
Sbjct: 79 LLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELN 138
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD 204
FVF+ +LK + + G +H I K+G ++FV T L+D Y+ C + +R+VFD
Sbjct: 139 PFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFD 198
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
L K++VSWT M+ + +NDC +E L LF++MR + N T S+ AC L A
Sbjct: 199 GILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDV 258
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +HG LK E++ ++ ALLD+Y K G+I DAR F+E+ D++ W+ MI Y Q
Sbjct: 259 GKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQ 318
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
S +A+++F + A PN T ASVL A A + LN+G +H I++GL D V
Sbjct: 319 SDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 378
Query: 384 INALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISG-----------------LDDN 425
NAL+D+YAKC + ++ +F E+ DV WN++I G L+
Sbjct: 379 SNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYR 438
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V VT S + ACASL A++ G +H+ + K ++ V AL++ YAKCG + A
Sbjct: 439 VQATEVTYSSALRACASLAALEPGLQIHSLTVKT-TFDKDIVVTNALIDMYAKCGSIKDA 497
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R+VFD M +++ V+W+AMI GY M G AC++
Sbjct: 498 RLVFDLMNKQDEVSWNAMISGYSMHG----------------------------LACANA 529
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G++ +G F SM +D P ++HY CMV LL R G L++A++ ++ +P +P V ++ A
Sbjct: 530 GLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRA 589
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C +++ +LG + + +LE+ P +VL+SN+YA+ RW V VR+ MK++G+
Sbjct: 590 LLGACVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGV 649
Query: 666 SKSPGCSLVD 675
K PG S ++
Sbjct: 650 KKEPGLSWIE 659
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 265/520 (50%), Gaps = 30/520 (5%)
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQ 201
E ++ ++ L+ C + + G +HCEI+K GG D F L++MY K + + +
Sbjct: 35 EFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASK 94
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLR 260
+FDE ++N +S+ ++I GY ++ E + LF R+ REG E N +++ +
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGH-ELNPFVFTTILKLLVSMD 153
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
G +H I K+G E N+ + TAL+D Y CG + AR VFD + D+VSWT M+
Sbjct: 154 CGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVT 213
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
+ ++ +ALKLF+ + F PN+ T ASV A L ++G+ VH ++ E
Sbjct: 214 CFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL 273
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
D V AL+D+Y K I DAR FE +KDVI W+ +I+ +
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V P+ T SV+ ACA++ + +G+ +H + K G L S+V+V AL++ YAKCG
Sbjct: 334 QALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIG-LHSDVFVSNALMDVYAKCGRM 392
Query: 483 QSARMVFDAMREKNTVT-WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+++ +F +N VT W+ +I G+ GDG +L LF +ML VQ EV +++ L A
Sbjct: 393 ENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRA 452
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C+ + G + +S+ F + ++D+ A+ G +++A + M + +VS
Sbjct: 453 CASLAALEPGLQ-IHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVS 511
Query: 602 ----LFGAFLHG--CGLYSRFDLGEVMIKKMLELHPDKAC 635
+ G +HG C D G+ M++ H + C
Sbjct: 512 WNAMISGYSMHGLACANAGLLDQGQAYFTSMIQDHGIEPC 551
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 224/439 (51%), Gaps = 15/439 (3%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
+N T L+ Y G V AR VFD + D S+ M+ + ND +K+ ++ + M
Sbjct: 172 SNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQM 231
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDI 196
R + +NF F+ V KAC L D G VH C + D +V L+D+Y K DI
Sbjct: 232 RMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDI 291
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+R F+E K+V+ W+ MIA Y Q+D ++E + +F +MR+ V NQ T S++ AC
Sbjct: 292 DDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQAC 351
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-DLVSW 315
A + L+ G +H +++KIG+ + + AL+D+Y KCG + ++ +F E D+ W
Sbjct: 352 ATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPW 411
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+IVG+ Q G +KAL+LF + VT +S L A A L L G +HSL ++
Sbjct: 412 NTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVK 471
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV 434
+ D V NAL+DMYAKC I DAR +F+ +++D ++WN++ISG +
Sbjct: 472 TTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHG-------- 523
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR- 493
ACA+ G + G + + + + T ++ + G A + D +
Sbjct: 524 ---LACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPF 580
Query: 494 EKNTVTWSAMIGGYGMQGD 512
+ + + W A++G + D
Sbjct: 581 QPSVMVWRALLGACVIHND 599
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 318/573 (55%), Gaps = 55/573 (9%)
Query: 157 CELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGS---SRQVFDETLDKNVVS 213
CE +D+ +VHC+ +K G + VL V + + G +R++FDE + N+
Sbjct: 28 CE--SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFI 85
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W +MI GY + D Q G+ L+ M V+ ++ T L + AL G+ LHG++L
Sbjct: 86 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 145
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K G++ N + TAL+ MY+ CG + AR VFD D+++W +I Y + G +++ +
Sbjct: 146 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 205
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYA 392
LF + P VT+ VLSA ++L +L G+ VHS +E V+ NA++DMYA
Sbjct: 206 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 265
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISGLDD---------------------------- 424
C + A IF + + +D+I+W +I+SG +
Sbjct: 266 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 325
Query: 425 --------------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
NV PD T+VSV++ACA LGA+++G + Y + + +
Sbjct: 326 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI-KN 384
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+++V AL++ Y KCGD A +F M +++ TW+AMI G + G G +L +FS+ML
Sbjct: 385 DLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNML 444
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ P+E+ + +LSAC+HTG+V +G K F M P++ HY C+VDLLARAGRL
Sbjct: 445 KASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRL 504
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA E +ENMPI+ + ++GA L GC +Y D+ E+++K++LEL PD YVL+ N+Y
Sbjct: 505 KEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIY 564
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
A+ RW + ++R++M +G+ K+PGCSL++++
Sbjct: 565 AACKRWNDLRELRQMMMDKGIKKTPGCSLIEMN 597
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 163/556 (29%), Positives = 259/556 (46%), Gaps = 60/556 (10%)
Query: 46 SLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMY---GSFGHVKYARSV 102
S P+ P ++LL C+S L+ H I GL + V + +G +YAR +
Sbjct: 15 SPPTHPLISLLETCESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRL 74
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
FD +P P+ + + MIR Y D + V Y M +R + D + F + K +
Sbjct: 75 FDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIAL 134
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
+ G ++H ++K G + FV T LV MY C + ++R VFD +V++W +I+ Y
Sbjct: 135 EYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAY 194
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
+ +E LF M + V +TL +++AC+KL+ L GK +H Y+ +E N
Sbjct: 195 NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNL 254
Query: 282 HLVTALLDMYVKCG------------NIRD-------------------ARSVFDELCSI 310
L A++DMY CG N RD AR+ FD++
Sbjct: 255 VLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEK 314
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
D VSWTAMI GY +S +AL+LF + + + P+ T+ SVL+A A LG L +G +
Sbjct: 315 DYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIR 374
Query: 371 SLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---- 425
+ R ++ D V NAL+DMY KC + A IF S++D W ++I GL N
Sbjct: 375 TYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE 434
Query: 426 -------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
+ PD +T + V+SAC G V G T Q + N+ L
Sbjct: 435 KALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCL 494
Query: 473 LNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
++ A+ G + A V + M K N++ W A++ G + + + + +L E++P+
Sbjct: 495 VDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL--ELEPD 552
Query: 532 E----VIFTTILSACS 543
V+ I +AC
Sbjct: 553 NGAVYVLLCNIYAACK 568
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 226/721 (31%), Positives = 360/721 (49%), Gaps = 101/721 (14%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDG---------------------LTNDKCNTKLVSMYGS 92
+LL CKS ++ H +I G ++ T +V+ Y +
Sbjct: 49 SLLKECKSANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPRSLGTGVVASYLA 108
Query: 93 FGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
G YA V + + P+P + + ++IR + + M + D+F
Sbjct: 109 CGATDYALLVLERVTPSPAVW-WNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPH 167
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK- 209
VLKAC EL G H I G + F+ LV MY++C + + +FDE +
Sbjct: 168 VLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRG 227
Query: 210 --NVVSWTSMIAGYVQNDCAQEGLVLFNRM------REGFVEGNQITLGSLVTACAKLRA 261
+V+SW S+++ +V++ A L LF++M + + I++ +++ AC L+A
Sbjct: 228 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 287
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD---------------- 305
+ Q K +HG ++ G + + AL+D Y KCG + +A VF+
Sbjct: 288 VPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 347
Query: 306 -------------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
E +D+V+WTA+I GY+Q G +AL LF ++ PN
Sbjct: 348 YSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPN 407
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-----------EDYTVINALVDMYAKCH 395
VTI SVLSA A LG + G +H+ ++ L ED V NAL+DMY+KC
Sbjct: 408 CVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR 467
Query: 396 VIADARYIFE--TTSEKDVIAWNSIISGL----DDN---------------VSPDAVTLV 434
AR IF+ E++V+ W +I G D N V+P+A T+
Sbjct: 468 SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTIS 527
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALLNFYAKCGDAQSARMVFDAMR 493
++ ACA L A+++G +HAY + S+ Y V L++ Y+KCGD +AR VFD+M
Sbjct: 528 CILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMS 587
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+K+ ++W++M+ GYGM G G +L +F M P+++ F +L ACSH GMV +G
Sbjct: 588 QKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLS 647
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F SM D+ P +HY C +DLLAR+GRL++A +++MP+EP ++ A L C ++
Sbjct: 648 YFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVH 707
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
S +L E + K++E++ + Y L+SN+YA+ GRW V ++R LMK+ G+ K PGCS
Sbjct: 708 SNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSW 767
Query: 674 V 674
V
Sbjct: 768 V 768
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 216/506 (42%), Gaps = 83/506 (16%)
Query: 50 IPCLNLLGLC---KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDS 105
I +N+L C K+ K H I +G D L+ Y G ++ A VF+
Sbjct: 273 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNM 332
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR------------------------- 140
M D S+ M+ Y + ++ E +K MRK
Sbjct: 333 MEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEA 392
Query: 141 LKEHDNFVFS----------KVLKACCELRDIDEGMKVHCEIVK---------VGGPDS- 180
L +FS VL AC L +G ++H +K GG D
Sbjct: 393 LNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDED 452
Query: 181 -FVLTGLVDMYAKCRDIGSSRQVFDETL--DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
V L+DMY+KCR ++R +FD+ ++NVV+WT MI G+ Q + + L LF M
Sbjct: 453 LMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEM 512
Query: 238 -REGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVT-ALLDMYVK 293
E + V N T+ ++ ACA L A+ GK +H Y+L+ E +++ V L+DMY K
Sbjct: 513 ISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSK 572
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CG++ AR VFD + +SWT+M+ GY G +AL +F + A F P+ +T V
Sbjct: 573 CGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVV 632
Query: 354 LSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS 408
L A + G ++ G M G+ E Y +D+ A+ S
Sbjct: 633 LYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYA---CAIDLLAR--------------S 675
Query: 409 EKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ AW ++ D + P AV V+++SAC V++ HA + + + N
Sbjct: 676 GRLDKAWRTV---KDMPMEPTAVVWVALLSACRVHSNVELAE--HALNKLVEMNAENDGS 730
Query: 469 GTALLNFYAKCGDAQSARMVFDAMRE 494
T + N YA G + + M++
Sbjct: 731 YTLISNIYATAGRWKDVARIRHLMKK 756
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 136/302 (45%), Gaps = 32/302 (10%)
Query: 46 SLPSIPCLNLLGLCKSTGSLKAF------HA------LLIVD----GLTND-KCNTKLVS 88
SLP+ C+ ++ + + SL AF HA LL +D G D L+
Sbjct: 404 SLPN--CVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALID 461
Query: 89 MYGSFGHVKYARSVFDSMP--NPDFYSFQVMI----RWYFLNDLYKDIVEFYKCMRKRLK 142
MY K ARS+FD +P + ++ VMI ++ ND K VE
Sbjct: 462 MYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS--EPYGV 519
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS---FVLTGLVDMYAKCRDIGSS 199
+ + S +L AC L I G ++H +++ +S FV L+DMY+KC D+ ++
Sbjct: 520 APNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTA 579
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R VFD K+ +SWTSM+ GY + E L +F++MR+ + IT ++ AC+
Sbjct: 580 RHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHC 639
Query: 260 RALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA-RSVFDELCSIDLVSWTA 317
+ QG + G+ + +D+ + G + A R+V D V W A
Sbjct: 640 GMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVA 699
Query: 318 MI 319
++
Sbjct: 700 LL 701
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 223/651 (34%), Positives = 349/651 (53%), Gaps = 24/651 (3%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPN 108
IP L KS K H ++ GL ND K L+S+Y S YA++VFD + N
Sbjct: 7 IPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIEN 66
Query: 109 PDFYSF-QVMIRWYFLNDLYKDIVEFY-KCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P S ++ Y N +Y + + + K M + D++ + VLKAC LR + G
Sbjct: 67 PFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQ 126
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+H +VK G D V + LV MYAKC + + ++FDE DK+V W ++I+ Y Q+
Sbjct: 127 MIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSG 186
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+E L F MR E + +T+ + +++CA+L L +G+ +H ++ G ++S +
Sbjct: 187 KFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSA 246
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY KCG + A VF+++ + +V+W +MI GY G ++LF P
Sbjct: 247 ALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKP 306
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA-LVDMYAKCHVIADARYIF 404
T+ S L A +Q L G+ VH IR ++ +N+ L+D+Y KC + A IF
Sbjct: 307 TLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIF 366
Query: 405 ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQ 447
+ + ++WN +ISG V PDA+T SV++AC+ L A++
Sbjct: 367 KLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALE 426
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +H ++ L ++ V +G ALL+ YAKCG + A VF + E++ V+W++MI Y
Sbjct: 427 KGREIHNLIVERNLGNNEVVMG-ALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAY 485
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G G +L LF++ML V+P+ V F ILSACSH G+V +G F M + +P
Sbjct: 486 GSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPR 545
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMP-IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++HY C++ LL RAGRL EA E +++ P I D L C L+ DLG + + +
Sbjct: 546 IEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENL 605
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
++ PD + Y+++SN+YAS G+W V VR MK GL K+PGCS ++++
Sbjct: 606 IDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEIN 656
>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
Length = 1118
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 206/599 (34%), Positives = 323/599 (53%), Gaps = 25/599 (4%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
AR +FD + +P ++R + ++ + + +R R D F S +L+AC
Sbjct: 522 ARDLFDEIRSPTPRLANALLRAHIRARQWRAAILLGQRLRVR---RDGFTLSLLLRACTA 578
Query: 159 LRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
L + G VH V+ D+FV T +V MY++C D+ + + ++V TS
Sbjct: 579 LPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTS 638
Query: 217 MIAGYVQNDCAQEGLVLFNRMREG-FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
++ GY QN A+E L F R G V +TL S+++A A+L + +G+ H Y+++
Sbjct: 639 VVTGYEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQACHAYVVRN 698
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
+ + LV A+L YVK G+++ + +F+ + D+++W+ MI GY Q G +++
Sbjct: 699 SLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMY 758
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
+ A PN VT+ SVL A A + + G+ +H + + +G E + V ALVDMY KC
Sbjct: 759 REMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYMKC 818
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGLDDNV-----------------SPDAVTLVSVI 437
+A +F +KDV+AW ++I GL N PDAVT+V V+
Sbjct: 819 SCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVL 878
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
+AC+ G ++ LH Y + G ++N +V ALL+ Y+KCGD SA VF+ EK+
Sbjct: 879 AACSEFGGNRLAICLHGYLVRNGF-NNNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDI 937
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V W +MI GYG G G ++AL+ M+ +QPN V F ++LSACSH+G+V EG + F S
Sbjct: 938 VVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQEGIQIFDS 997
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
M + F VP+ +H MVDLL RAG L+EA+ + +M + A L C ++
Sbjct: 998 MTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAACRKHNNTK 1057
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ EV K +L+L PD YY L++NLYA D +W V R+++K R L K G S V++
Sbjct: 1058 MSEVAAKNLLKLDPDHVGYYNLLTNLYAFDEKWENVKDTRDMVKGRDLRKVAGYSSVEV 1116
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 235/480 (48%), Gaps = 30/480 (6%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNP 109
LL C + SL +A HA + ++ T +V MY G + A + + + P
Sbjct: 572 LLRACTALPSLTHGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKP 631
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH---DNFVFSKVLKACCELRDIDEGM 166
D ++ Y N + ++ +EF+ R + + V+ A +L + +G
Sbjct: 632 DIVLRTSVVTGYEQNGMAEEALEFFA--RNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQ 689
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
H +V+ D ++ ++ Y K D+ +S ++F+ D++V++W+ MI GYVQ+
Sbjct: 690 ACHAYVVRNSLSYDLALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHG 749
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A G ++ M + V+ N +TL S++ ACA + +GK LH + IG E+ + T
Sbjct: 750 DAHTGFRMYREMVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVAT 809
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY+KC +A +F + D+V+W A+I G TQ+ P ++L F D P
Sbjct: 810 ALVDMYMKCSCHEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVP 869
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIF 404
+ VT+ VL+A ++ G + +H +R G + V AL+D+Y+KC + A +F
Sbjct: 870 DAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVF 929
Query: 405 ETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQ 447
E T+EKD++ W S+I+G + ++ P+ VT +SV+SAC+ G VQ
Sbjct: 930 EGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQ 989
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGG 506
G + T+ + N +A+++ + G+ Q A R++ D TW A++
Sbjct: 990 EGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAA 1049
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/384 (28%), Positives = 179/384 (46%), Gaps = 35/384 (9%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L L+ A A LH IL+ G+ +SH +TA + + C AR +FDE+
Sbjct: 474 LQKLLEAAAATSTPLAAAHLHANILRSGLLHSSHHLTAHV---LACYPPGLARDLFDEIR 530
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGR 367
S A++ + ++ A+ L + D F T++ +L A L +L GR
Sbjct: 531 SPTPRLANALLRAHIRARQWRAAILLGQRLRVRRDGF----TLSLLLRACTALPSLTHGR 586
Query: 368 MVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
VH+ +R ED V A+V MY++C +A A + + D++ S+++G + N
Sbjct: 587 AVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVVTGYEQN 646
Query: 426 --------------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
V+P VTLVSV+SA A LG V+ G + HAY + LS +
Sbjct: 647 GMAEEALEFFARNVVGQGVLVTP--VTLVSVMSAAAQLGHVRKGQACHAYVVRNS-LSYD 703
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+ + A+L FY K GD Q++ +F+ M +++ +TWS MI GY GD ++ +M+
Sbjct: 704 LALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMYREMVK 763
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
VQPN V ++L AC+ EG K + + + +VD+ + E
Sbjct: 764 ARVQPNSVTLVSVLQACALVVDAEEG-KRLHRVAVSIGCELELGVATALVDMYMKCSCHE 822
Query: 586 EALEFMENMPIEPDVSLFGAFLHG 609
EA+ MP + DV + A + G
Sbjct: 823 EAMRLFHRMP-KKDVVAWAAVIGG 845
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 89/203 (43%), Gaps = 15/203 (7%)
Query: 33 TQHELD-QTFASF-------HSLPSIPCLNLLGLCKSTGSLK---AFHALLIVDGLTNDK 81
TQ+EL ++ SF H ++ + +L C G + H L+ +G N+
Sbjct: 847 TQNELPGESLHSFKCMLLNDHVPDAVTMVKVLAACSEFGGNRLAICLHGYLVRNGFNNNA 906
Query: 82 -CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
L+ +Y G + A VF+ D + MI Y + L ++ V Y+ M
Sbjct: 907 FVAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVWGSMIAGYGAHGLGQEAVALYQRMIAS 966
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGS 198
+ +N F VL AC + EG+++ + +V G P++ + +VD+ + ++
Sbjct: 967 SIQPNNVTFLSVLSACSHSGLVQEGIQIFDSMTQVFGVVPNAEHQSAMVDLLGRAGELQE 1026
Query: 199 SRQVFDETLDKNVV-SWTSMIAG 220
+ +V + + V +W +++A
Sbjct: 1027 AIRVIRDMDGRAVAHTWCALLAA 1049
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 213/648 (32%), Positives = 348/648 (53%), Gaps = 28/648 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKC-----NTKLVSMYGSFGHVKYARSVFDSMP 107
+++L L + L+ + + G +C + L+ MY G VK A +FD M
Sbjct: 230 VSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMW 289
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCM-RKRLKEHDNFVFSKVLKACCELRDIDEGM 166
D S+ M+ Y + Y ++++ M RK +K + V + VL A E RD+++G
Sbjct: 290 VKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVL-AATETRDLEKGK 348
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+VH +++G D V T +V MYAKC ++ +++ F +++V W++ ++ VQ
Sbjct: 349 EVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAG 408
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
E L +F M+ ++ ++ L SLV+ACA++ + GK +H Y++K + + + T
Sbjct: 409 YPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVAT 468
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
L+ MY +C + A ++F+ + D+V+W +I G+T+ G P AL++F + + P
Sbjct: 469 TLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQP 528
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
+ T+ S+LSA A L +L +G H I+ G+E + V AL+DMYAKC + A +F
Sbjct: 529 DSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLF 588
Query: 405 ETTSE-KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAV 446
KD ++WN +I+G N V P+ VT V+++ A + L +
Sbjct: 589 HLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSIL 648
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ + HA + G +SS + +G +L++ YAK G + F M K T++W+AM+ G
Sbjct: 649 REAMAFHACIIRMGFISSTL-IGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSG 707
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
Y M G G +LALFS M V + V + ++LSAC H G++ EG F SM P
Sbjct: 708 YAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEP 767
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
SM+HY CMVDLL AG +E L ++ MP EPD ++GA L C ++S LGE+ + +
Sbjct: 768 SMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHL 827
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
L+L P A +Y+++S++YA GRWI + R M GL K+PG S V
Sbjct: 828 LKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 171/587 (29%), Positives = 286/587 (48%), Gaps = 57/587 (9%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
L+LL CK L HA LIV T +S+ NP
Sbjct: 56 LHLLRSCKYLNPLLQIHARLIVQQCTLAP----------------------NSITNPSLI 93
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+ +IR Y L+++ ++ Y+ M E D + F+ VLKAC D EG+ +H +I
Sbjct: 94 LWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDI 153
Query: 173 V-KVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+ D F+ TGLVDMY K + ++R+VFD+ K+V SW +MI+G Q+ E L
Sbjct: 154 ASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEAL 213
Query: 232 VLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK---IGIEINSHLVTAL 287
+F RM+ E VE + +++ +L A ++L + K +HGY+++ G+ NS L
Sbjct: 214 EIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVSNS-----L 268
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY KCG ++ A +FD++ D +SW M+ GY G + L+L + K N
Sbjct: 269 IDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNK 328
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFET 406
+++ + + A+ + +L G+ VH+ ++LG+ D V +V MYAKC + A+ F +
Sbjct: 329 ISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLS 388
Query: 407 TSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
+D++ W++ +S L + + PD L S++SACA + + ++G
Sbjct: 389 LEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLG 448
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H Y K + S++ V T L++ Y +C A +F+ M K+ V W+ +I G+
Sbjct: 449 KMMHCYVIKAD-MGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTK 507
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
GD +L +F + VQP+ ++LSAC+ + G CF+ M
Sbjct: 508 CGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGI-CFHGNIIKNGIESEMH 566
Query: 570 HYVCMVDLLARAGRLEEALE-FMENMPIEPDVS---LFGAFLH-GCG 611
V ++D+ A+ G L A F N ++ +VS + +LH GC
Sbjct: 567 VKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCA 613
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 229/463 (49%), Gaps = 53/463 (11%)
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+ +++ W S+I Y + QE + + M +E ++ T ++ AC H+G
Sbjct: 89 NPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVA 148
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H I +E + + T L+DMY K G++ +AR VFD++ D+ SW AMI G +QS
Sbjct: 149 IHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSN 208
Query: 328 PDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA 386
P +AL++F + + P+ V+I ++ A ++L +++ + +H +R + V N+
Sbjct: 209 PCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFG-VVSNS 267
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------LDD----NVSPD 429
L+DMY+KC + A IF+ KD I+W ++++G LD+ ++ +
Sbjct: 268 LIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMN 327
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+++V+ + A ++ G +H Y+ + G ++S++ V T +++ YAKCG+ + A+ F
Sbjct: 328 KISVVNSVLAATETRDLEKGKEVHNYALQLG-MTSDIVVATPIVSMYAKCGELKKAKEFF 386
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH--TGM 547
++ ++ V WSA + G G +L++F +M +E ++P++ I ++++SAC+ +
Sbjct: 387 LSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSR 446
Query: 548 VGEGWKCF-------------------YSMCRDFKFVPSM---KHYV------CMVDLLA 579
+G+ C+ Y+ C+ F + ++ HY +++
Sbjct: 447 LGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFT 506
Query: 580 RAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLG 619
+ G ALE + ++PD + L C L LG
Sbjct: 507 KCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLG 549
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 344/629 (54%), Gaps = 23/629 (3%)
Query: 69 HALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L + G D + L+ MY + + F SMP ++ S+ +I ND
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ +E +K M+K F+ V ++C L + G ++H +K G D + T
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTAT 316
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMY KC ++ ++++F+ + N+ S+ ++I GY ++D E L +F +++ + ++
Sbjct: 317 LDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDE 376
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L ACA ++ +G +HG +K + N + A+LDMY KCG + +A VF+E
Sbjct: 377 VSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE 436
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ S D VSW A+I + Q+G +K L LF + P+ T SVL A A LN G
Sbjct: 437 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCG 496
Query: 367 RMVHSLGI--RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
+H+ I RLGL+ + I AL+DMY+KC ++ A + + +E+ V++WN+IISG
Sbjct: 497 MEIHNRIIKSRLGLDSFVGI-ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSL 555
Query: 422 --------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
L+ V PD T +++ CA+L V++G +HA K+ L S+ Y
Sbjct: 556 QKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKEL-QSDAY 614
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
+ + L++ Y+KCG+ Q +++F+ ++ VTW+AM+ GY G G +L +F M E
Sbjct: 615 ISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLEN 674
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
V+PN F +L AC H G+V +G F+SM ++ P ++HY C+VD++ R+G++ +A
Sbjct: 675 VKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKA 734
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
LE +E MP E D ++ L C ++ ++ E +L+L P+ + YVL+SN+YA+
Sbjct: 735 LELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANA 794
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
G W V ++R++M+ GL K PGCS +++
Sbjct: 795 GMWNEVTKLRKMMRFNGLKKEPGCSWIEI 823
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 198/628 (31%), Positives = 309/628 (49%), Gaps = 62/628 (9%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G + A+ +FD+MP D S+ +I Y N ++ +++ + M + D F
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETL 207
+ VLK+C L D G+++H VK+G D V+TG L+DMYAKC+ + S Q F
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGF-DCDVVTGSALLDMYAKCKKLDCSIQFFHSMP 236
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+KN VSW+++IAG VQND + GL LF M++ V +Q T S+ +CA L AL G
Sbjct: 237 EKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQ 296
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
LHG+ LK + + TA LDMY+KC N+ DA+ +F+ L + +L S+ A+IVGY +S
Sbjct: 297 LHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDK 356
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LGLEDYTVINA 386
+AL +F + + + V+++ A A + G VH L ++ L + V NA
Sbjct: 357 GIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANA 416
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
++DMY KC + +A +FE +D ++WN+II+ + N + PD
Sbjct: 417 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPD 476
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T SV+ ACA A+ G +H K L + +VG AL++ Y+KCG + A +
Sbjct: 477 EFTYGSVLKACAGWQALNCGMEIHNRIIKS-RLGLDSFVGIALIDMYSKCGMMEKAEKLH 535
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D + E+ V+W+A+I G+ +Q + FS ML V P+ + TIL C++ V
Sbjct: 536 DRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVE 595
Query: 550 EGWKC---------------------FYSMC---RDFKFV----PSMKH--YVCMVDLLA 579
G + YS C +DF+ + P+ + MV A
Sbjct: 596 LGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYA 655
Query: 580 RAGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE---LHPDK 633
+ G EEAL+ E M +E P+ + F A L CG + G ML L P
Sbjct: 656 QHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQL 715
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMK 661
Y +V + GR +V++ EL++
Sbjct: 716 EHYSCVVDIM----GRSGQVSKALELIE 739
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 147/585 (25%), Positives = 270/585 (46%), Gaps = 62/585 (10%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCR------------ 194
FS + + C + + + G + H ++ P FV L+ MY KC
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 195 -------------------DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
DIG ++++FD +++VVSW S+I+GY+ N ++ + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
+M ++ T ++ +C+ L G +HG +K+G + + +ALLDMY KC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+ + F + + VSW+A+I G Q+ L+LF + + A + T ASV
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 356 ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
+ A L L +G +H ++ D + A +DMY KC+ ++DA+ +F + ++ +
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343
Query: 415 WNSIISGL---DDNVSP--------------DAVTLVSVISACASLGAVQVGSSLHAYST 457
+N+II G D + D V+L ACA + G +H S
Sbjct: 344 YNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSM 403
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K L SN+ V A+L+ Y KCG A +VF+ M ++ V+W+A+I + G+ +L
Sbjct: 404 KS-LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTL 462
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
+LF ML ++P+E + ++L AC+ + G + + + + S + ++D+
Sbjct: 463 SLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVG-IALIDM 521
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL--HPDKAC 635
++ G +E+A E + + E V + A + G L + + + KMLE+ PD
Sbjct: 522 YSKCGMMEKA-EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 580
Query: 636 YYVLV---SNLYASD-GRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y ++ +NL + G+ I +++ ++ S +LVD+
Sbjct: 581 YATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS---TLVDM 622
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 197/573 (34%), Positives = 317/573 (55%), Gaps = 55/573 (9%)
Query: 157 CELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGS---SRQVFDETLDKNVVS 213
CE +D+ +VHC+ +K G + VL V + + G +R++FDE + N+
Sbjct: 49 CE--SMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFI 106
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W +MI GY + D Q G+ L+ M V+ ++ T L + AL G+ LHG++L
Sbjct: 107 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 166
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K G++ N + TAL+ MY+ CG + AR VFD D+++W +I Y + G +++ +
Sbjct: 167 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 226
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYA 392
LF + P VT+ VLSA ++L +L G+ VHS +E V+ NA++DMYA
Sbjct: 227 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYA 286
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISGLDD---------------------------- 424
C + A IF + + +D+I+W +I+SG +
Sbjct: 287 DCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDG 346
Query: 425 --------------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
NV PD T+VSV++ACA LGA+++G + Y + + +
Sbjct: 347 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI-KN 405
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+++V AL++ Y KCGD A +F M +++ TW+AMI G + G G +L +FS+ML
Sbjct: 406 DLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNML 465
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ P+E+ + +LSAC+HTG+V +G K F M P++ HY C+VDLLARAGRL
Sbjct: 466 KASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRL 525
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA E +ENMPI+ + ++GA L GC +Y D+ E+++K++LEL PD YVL+ N+Y
Sbjct: 526 KEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIY 585
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
A+ RW + ++R++M +G+ K PGCSL++++
Sbjct: 586 AACKRWNDLRELRQMMMDKGIKKXPGCSLIEMN 618
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 175/596 (29%), Positives = 271/596 (45%), Gaps = 75/596 (12%)
Query: 6 LLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSL 65
L RHV KKPK Q T SF S P+ P ++LL C+S L
Sbjct: 11 LHHRHV---KKPK-----------QMTTIAATSSALKSF-SPPTHPLISLLETCESMDQL 55
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMY---GSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+ H I GL + V + +G +YAR +FD +P P+ + + MIR Y
Sbjct: 56 QQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYS 115
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
D + V Y M +R + D + F + K ++ G ++H ++K G + F
Sbjct: 116 RLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVF 175
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V T LV MY C + ++R VFD +V++W +I+ Y + +E LF M +
Sbjct: 176 VHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQ 235
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG------ 295
V +TL +++AC+KL+ L GK +H Y+ +E N L A++DMY CG
Sbjct: 236 VLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSAL 295
Query: 296 ------NIRD-------------------ARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
N RD AR+ FD++ D VSWTAMI GY +S +
Sbjct: 296 GIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKE 355
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
AL+LF + + + P+ T+ SVL+A A LG L +G + + R ++ D V NAL+D
Sbjct: 356 ALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALID 415
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVT 432
MY KC + A IF S++D W ++I GL N + PD +T
Sbjct: 416 MYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEIT 475
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ V+SAC G V G T Q + N+ L++ A+ G + A V + M
Sbjct: 476 YIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM 535
Query: 493 REK-NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE----VIFTTILSACS 543
K N++ W A++ G + + + + +L E++P+ V+ I +AC
Sbjct: 536 PIKANSIVWGALLAGCRVYRESDMAEMVVKQIL--ELEPDNGAVYVLLCNIYAACK 589
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 217/642 (33%), Positives = 347/642 (54%), Gaps = 30/642 (4%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
C + HA ++V G + +LV Y G V +A VFD MP + +++ +
Sbjct: 66 CPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAV 125
Query: 118 IRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV- 175
I+ + + +E F+ + D F + V+KAC L + +G KV E+V+
Sbjct: 126 IKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVW-EMVETD 184
Query: 176 -----GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
P+ FV LVDM+AKC + +R VF+ +++ +WT+MI G V + E
Sbjct: 185 IASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEV 244
Query: 231 LVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ LFN MR EGF + I ++++AC + L G LHG +K G + ++ AL+D
Sbjct: 245 VDLFNHMRSEGFGVDSLIA-ATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVD 303
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG + A +F S D+VSW+++IVGY+Q+G + ++ LF + PN T
Sbjct: 304 MYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSST 363
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTS 408
+AS+L + L + G+ +H IR GLE V++AL+D+Y+K +I A IF T
Sbjct: 364 LASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTL 423
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+KD+ WNS+++G N + PD VT+VSV+ C + G
Sbjct: 424 DKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKE 483
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
LHAY K ++S V ALL+ Y KCG + A+ VF M E+NTVT++ +I +G
Sbjct: 484 LHAYVIKY-CINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHN 542
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+L+ F M + + P++V F +LS CSH G++ +G ++SM D+ P +HY
Sbjct: 543 HEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY 602
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C+VDL +R G+L+EA FM NM EP++ + G L C +++R D+ E++ K++ E +P
Sbjct: 603 SCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNP 662
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
+ Y++L+SN+YA G W V ++R ++++R L K G SL
Sbjct: 663 NDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNSL 704
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 217/642 (33%), Positives = 347/642 (54%), Gaps = 30/642 (4%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
C + HA ++V G + +LV Y G V +A VFD MP + +++ +
Sbjct: 61 CPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAV 120
Query: 118 IRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV- 175
I+ + + +E F+ + D F + V+KAC L + +G KV E+V+
Sbjct: 121 IKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVW-EMVEAD 179
Query: 176 -----GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
P+ FV LVDM+AKC + +R VF+ +++ +WT+MI G V + E
Sbjct: 180 IASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEV 239
Query: 231 LVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ LFN MR EGF + I ++++AC + L G LHG +K G + ++ AL+D
Sbjct: 240 VDLFNHMRSEGFGVDSLIA-ATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVD 298
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG + A +F S D+VSW+++IVGY+Q+G + ++ LF + PN T
Sbjct: 299 MYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSST 358
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTS 408
+AS+L + L + G+ +H IR GLE V++AL+D+Y+K +I A IF T
Sbjct: 359 LASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTL 418
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+KD+ WNS+++G N + PD VT+VSV+ C + G
Sbjct: 419 DKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKE 478
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
LHAY K ++S V ALL+ Y KCG + A+ VF M E+NTVT++ +I +G
Sbjct: 479 LHAYVIKY-CINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHN 537
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+L+ F M + + P++V F +LS CSH G++ +G ++SM D+ P +HY
Sbjct: 538 HEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY 597
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C+VDL +R G+L+EA FM NM EP++ + G L C +++R D+ E++ K++ E +P
Sbjct: 598 SCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNP 657
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
+ Y++L+SN+YA G W V ++R ++++R L K G SL
Sbjct: 658 NDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNSL 699
>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1274
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/610 (34%), Positives = 333/610 (54%), Gaps = 25/610 (4%)
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
S G + AR VFD +P PD ++ +IR Y + ++ Y+ M + + + F
Sbjct: 46 SRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPF 105
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
VLKAC L D+ G +H G D FV T L+D+Y +C G +R VF + ++
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165
Query: 211 VVSWTSMIAGYVQNDCAQEGLV-LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
VV+W +M+AGY + + L + G + N TL SL+ A+ AL QG +H
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Query: 270 GYILKIGIEINSHLV---TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
Y L+ +E N V TALLDMY KC + A VF + + V+W+A+I G+
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285
Query: 327 YPDKALKLFTDKKWADF-FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
+A LF D F + ++AS L A L +L+MG +H+L + G+ D T
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
N+L+ MYAK +I +A F+ + KD I++ +++SG N +
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD T+VS+I AC+ L A+Q G H +GL + + +L++ YAKCG +R
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGL-ALETSICNSLIDMYAKCGKIDLSRQ 464
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VFD M ++ V+W+ MI GYG+ G G + LF M N+ P++V F +++ACSH+G+
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG F +M + +P M+HY+CMVDLLAR G L+EA +F+++MP++ DV ++GA L
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C ++ DLG+ + + + +L P+ +VL+SN++++ GR+ +VR + K +G K
Sbjct: 585 GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644
Query: 668 SPGCSLVDLD 677
SPG S ++++
Sbjct: 645 SPGYSWIEIN 654
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 228/491 (46%), Gaps = 35/491 (7%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR-- 140
+T L+ +Y AR+VF MP D ++ M+ Y + +Y + M+
Sbjct: 138 STALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGG 197
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV----GGPDSFVLTGLVDMYAKCRDI 196
L+ + + + S +L + + +G +H ++ + T L+DMYAKC+ +
Sbjct: 198 LRPNASTLVS-LLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQL 256
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTA 255
+ +VF +N V+W+++I G+V D E LF M EG + ++ S +
Sbjct: 257 VYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRV 316
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA L LH G LH I K GI + +LL MY K G I +A FDE+ D +S+
Sbjct: 317 CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY 376
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A++ G Q+G ++A +F + + P+ T+ S++ A + L L G+ H I
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII 436
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
GL + ++ N+L+DMYAKC I +R +F+ +DV++WN++I+G
Sbjct: 437 RGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTL 496
Query: 423 -----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST---KQGLLSSNVYVGTALLN 474
+ +PD VT + +I+AC+ G V G H + T K G+L + +++
Sbjct: 497 FLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK--HWFDTMTHKYGILPRMEHY-ICMVD 553
Query: 475 FYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQG--DGGGSLALFSDMLNEEVQPN 531
A+ G A +M K V W A++G + D G ++ L E N
Sbjct: 554 LLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGN 613
Query: 532 EVIFTTILSAC 542
V+ + I SA
Sbjct: 614 FVLLSNIFSAA 624
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 180/377 (47%), Gaps = 26/377 (6%)
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L+ ++ G + AR VFD + + D ++ A+I Y+ G A+ L+ PN
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T VL A + L +L GR +H+ GL D V AL+D+Y +C AR +F
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 407 TSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQV 448
+DV+AWN++++G ++ + P+A TLVS++ A GA+
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 449 GSSLHAYSTKQGLLSS--NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
G+S+HAY + L + V +GTALL+ YAKC A VF M +N VTWSA+IGG
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280
Query: 507 YGMQGDGGGSLALFSDMLNEEV-QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
+ + + LF DML E + + + L C+ + G + +++
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ-LHALIAKSGIH 339
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
+ ++ + A+AG + EA F + + ++ +S +GA L GC + + ++ KK
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAFLVFKK 398
Query: 626 M--LELHPDKACYYVLV 640
M + PD A L+
Sbjct: 399 MQACNMEPDIATMVSLI 415
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 7/271 (2%)
Query: 56 LGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L +C S L HAL+ G+ D + L+SMY G + A FD + D
Sbjct: 314 LRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDT 373
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ ++ N ++ +K M+ E D ++ AC L + G H
Sbjct: 374 ISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGS 433
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
++ G ++ + L+DMYAKC I SRQVFD+ ++VVSW +MIAGY + +E
Sbjct: 434 VIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEA 493
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTALLD 289
LF M+ + +T L+ AC+ + +GK W K GI ++D
Sbjct: 494 TTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVD 553
Query: 290 MYVKCGNIRDARSVFDEL-CSIDLVSWTAMI 319
+ + G + +A + D+ W A++
Sbjct: 554 LLARGGLLDEAYQFIQSMPLKADVRVWGALL 584
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 48 PSIPCL-NLLGLCKSTGSL---KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARS 101
P I + +L+ C +L K H +I+ GL + CN+ L+ MY G + +R
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNS-LIDMYAKCGKIDLSRQ 464
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VFD MP D S+ MI Y ++ L K+ + M+ + D+ F ++ AC
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524
Query: 162 IDEG 165
+ EG
Sbjct: 525 VTEG 528
>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
Length = 1174
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 210/610 (34%), Positives = 333/610 (54%), Gaps = 25/610 (4%)
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
S G + AR VFD +P PD ++ +IR Y + ++ Y+ M + + + F
Sbjct: 46 SRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPF 105
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
VLKAC L D+ G +H G D FV T L+D+Y +C G +R VF + ++
Sbjct: 106 VLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRD 165
Query: 211 VVSWTSMIAGYVQNDCAQEGLV-LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
VV+W +M+AGY + + L + G + N TL SL+ A+ AL QG +H
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225
Query: 270 GYILKIGIEINSHLV---TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
Y L+ +E N V TALLDMY KC + A VF + + V+W+A+I G+
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285
Query: 327 YPDKALKLFTDKKWADF-FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVI 384
+A LF D F + ++AS L A L +L+MG +H+L + G+ D T
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
N+L+ MYAK +I +A F+ + KD I++ +++SG N +
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD T+VS+I AC+ L A+Q G H +GL + + +L++ YAKCG +R
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGL-ALETSICNSLIDMYAKCGKIDLSRQ 464
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VFD M ++ V+W+ MI GYG+ G G + LF M N+ P++V F +++ACSH+G+
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG F +M + +P M+HY+CMVDLLAR G L+EA +F+++MP++ DV ++GA L
Sbjct: 525 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL 584
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C ++ DLG+ + + + +L P+ +VL+SN++++ GR+ +VR + K +G K
Sbjct: 585 GACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 644
Query: 668 SPGCSLVDLD 677
SPG S ++++
Sbjct: 645 SPGYSWIEIN 654
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 135/490 (27%), Positives = 228/490 (46%), Gaps = 35/490 (7%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR-- 140
+T L+ +Y AR+VF MP D ++ M+ Y + +Y + M+
Sbjct: 138 STALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGG 197
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV----GGPDSFVLTGLVDMYAKCRDI 196
L+ + + + S +L + + +G +H ++ + T L+DMYAKC+ +
Sbjct: 198 LRPNASTLVS-LLPLLAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQL 256
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTA 255
+ +VF +N V+W+++I G+V D E LF M EG + ++ S +
Sbjct: 257 VYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRV 316
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA L LH G LH I K GI + +LL MY K G I +A FDE+ D +S+
Sbjct: 317 CASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISY 376
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A++ G Q+G ++A +F + + P+ T+ S++ A + L L G+ H I
Sbjct: 377 GALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVII 436
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
GL + ++ N+L+DMYAKC I +R +F+ +DV++WN++I+G
Sbjct: 437 RGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTL 496
Query: 423 -----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST---KQGLLSSNVYVGTALLN 474
+ +PD VT + +I+AC+ G V G H + T K G+L + +++
Sbjct: 497 FLGMKNQGFAPDDVTFICLIAACSHSGLVTEGK--HWFDTMTHKYGILPRMEHY-ICMVD 553
Query: 475 FYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQG--DGGGSLALFSDMLNEEVQPN 531
A+ G A +M K V W A++G + D G ++ L E N
Sbjct: 554 LLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGN 613
Query: 532 EVIFTTILSA 541
V+ + I SA
Sbjct: 614 FVLLSNIFSA 623
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 180/377 (47%), Gaps = 26/377 (6%)
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L+ ++ G + AR VFD + + D ++ A+I Y+ G A+ L+ PN
Sbjct: 41 LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T VL A + L +L GR +H+ GL D V AL+D+Y +C AR +F
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160
Query: 407 TSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQV 448
+DV+AWN++++G ++ + P+A TLVS++ A GA+
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220
Query: 449 GSSLHAYSTKQGLLSS--NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
G+S+HAY + L + V +GTALL+ YAKC A VF M +N VTWSA+IGG
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280
Query: 507 YGMQGDGGGSLALFSDMLNEEVQ-PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
+ + + LF DML E + + + L C+ + G + +++
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQ-LHALIAKSGIH 339
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
+ ++ + A+AG + EA F + + ++ +S +GA L GC + + ++ KK
Sbjct: 340 ADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTIS-YGALLSGCVQNGKAEEAFLVFKK 398
Query: 626 M--LELHPDKACYYVLV 640
M + PD A L+
Sbjct: 399 MQACNMEPDIATMVSLI 415
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 119/271 (43%), Gaps = 7/271 (2%)
Query: 56 LGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L +C S L HAL+ G+ D + L+SMY G + A FD + D
Sbjct: 314 LRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDT 373
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ ++ N ++ +K M+ E D ++ AC L + G H
Sbjct: 374 ISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGS 433
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
++ G ++ + L+DMYAKC I SRQVFD+ ++VVSW +MIAGY + +E
Sbjct: 434 VIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEA 493
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTALLD 289
LF M+ + +T L+ AC+ + +GK W K GI ++D
Sbjct: 494 TTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVD 553
Query: 290 MYVKCGNIRDARSVFDEL-CSIDLVSWTAMI 319
+ + G + +A + D+ W A++
Sbjct: 554 LLARGGLLDEAYQFIQSMPLKADVRVWGALL 584
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 7/124 (5%)
Query: 48 PSIPCL-NLLGLCKSTGSL---KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARS 101
P I + +L+ C +L K H +I+ GL + CN+ L+ MY G + +R
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNS-LIDMYAKCGKIDLSRQ 464
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VFD MP D S+ MI Y ++ L K+ + M+ + D+ F ++ AC
Sbjct: 465 VFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGL 524
Query: 162 IDEG 165
+ EG
Sbjct: 525 VTEG 528
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 239/760 (31%), Positives = 374/760 (49%), Gaps = 93/760 (12%)
Query: 5 SLLQRHVSRTKKPKLQLRFFSYTNQQT--------------PTQHELDQ---TFASFHSL 47
+++Q S KP +++ F S Q P + +L Q T S
Sbjct: 101 AIMQHQSSIAGKPAIRIVFVSVLQQLHHRYRCSISMLLRCFPIKSKLLQSQFTNTRLLSC 160
Query: 48 PSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
+IP + L C S K H I+ GL T L+ Y + YA + + +P
Sbjct: 161 ATIP-ITALKECNSLAHAKLLHQQSIMQGLLF-HLATNLIGTYIASNSTAYAILLLERLP 218
Query: 108 -NPD--FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
+P F+ Q++ R L +D+ Y+ M+ D++ F V KAC L +
Sbjct: 219 PSPSSVFWWNQLIRRALHLGSP-RDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSL 277
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV---VSWTSMIAG 220
G +H + + G + FV +V MY KC + + +FD+ + + VSW S+++
Sbjct: 278 GASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSA 337
Query: 221 YVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
Y+ A L LF++M + + I+L +++ ACA L A +G+ +HG+ ++ G+
Sbjct: 338 YMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVD 397
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF---T 336
+ + A++DMY KCG + +A VF + D+VSW AM+ GY+Q+G + AL LF T
Sbjct: 398 DVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMT 457
Query: 337 DKK-------WA----------------DFF---------PNHVTIASVLSASAQLGNLN 364
++ W D F PN VT+ S+LSA +G L
Sbjct: 458 EENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALL 517
Query: 365 MGRMVHSLGIRL---------GLEDYTVINALVDMYAKCHVIADARYIFETTSEKD--VI 413
G+ H I+ G +D VIN L+DMYAKC AR +F++ S KD V+
Sbjct: 518 HGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVV 577
Query: 414 AWNSIISG-------------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
W +I G +D ++ P+ TL + ACA L A++ G +HA
Sbjct: 578 TWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHA 637
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
Y + S ++V L++ Y+K GD +A++VFD M ++N V+W++++ GYGM G G
Sbjct: 638 YVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGE 697
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
+L +F +M + P+ + F +L ACSH+GMV G F M +DF P +HY CM
Sbjct: 698 DALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACM 757
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
VDL RAGRL EA++ + MP+EP ++ A L C L+S +LGE ++LEL
Sbjct: 758 VDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGND 817
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
Y L+SN+YA+ RW V ++R MK+ G+ K PGCS +
Sbjct: 818 GSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWI 857
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 362 bits (929), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 214/629 (34%), Positives = 337/629 (53%), Gaps = 25/629 (3%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA + GL +N + LVSMY G ++ A+ VFD++ + + M+ Y N
Sbjct: 350 HAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYA 409
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+++E + M+ D+F +S +L AC L+ +D G ++H I+K + FV L
Sbjct: 410 NEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNAL 469
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VDMYAK + +RQ F+ +++ VSW +I GYVQ + E LF RM + ++
Sbjct: 470 VDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDE 529
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L S+++ACA +R L QGK +H +K G E + ++L+DMY KCG I A +
Sbjct: 530 VSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILAC 589
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ +VS A+I GY Q ++A+ LF D +T AS+L A + LN+G
Sbjct: 590 MPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLG 648
Query: 367 RMVHSLGIRLGLE--DYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGLD 423
R +HSL +++GL+ D + +L+ MY DA +F E ++ K + W ++ISGL
Sbjct: 649 RQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLS 708
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N V PD T VS + ACA + +++ G+ H+ G S+
Sbjct: 709 QNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGF-DSDE 767
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+AL++ YAKCGD +S+ VF M R+K+ ++W++MI G+ G +L +F +M
Sbjct: 768 LTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQ 827
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
V P++V F +L+ACSH+G V EG F M + P H CMVDLL R G L+
Sbjct: 828 SHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLK 887
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
EA EF+ + EPD ++ L C ++ G+ +K++EL P + YVL+SN+YA
Sbjct: 888 EAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYA 947
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+ G W VN +R M+++G+ K PGCS +
Sbjct: 948 ASGNWDEVNTLRREMREKGVKKLPGCSWI 976
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 183/654 (27%), Positives = 297/654 (45%), Gaps = 58/654 (8%)
Query: 64 SLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
++K F + V + +++ Y G + A +F MPN + ++ +MI +
Sbjct: 245 AVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAK 304
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+ +EF++ MRK + VL A L +D G+ VH E +K G + +V
Sbjct: 305 GGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYV 364
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ LV MYAKC + ++++VFD ++NVV W +M+ GYVQN A E + LF M+
Sbjct: 365 GSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGF 424
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ T S+++ACA L+ L G LH I+K N + AL+DMY K G + DAR
Sbjct: 425 YPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQ 484
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F+ + + D VSW +IVGY Q +A LF P+ V++AS+LSA A +
Sbjct: 485 QFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRG 544
Query: 363 LNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L G+ VH L ++ G E ++L+DMYAKC I A I E+ V++ N++I+G
Sbjct: 545 LEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAG 604
Query: 422 ----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
L + ++ +T S++ AC + +G +H+ K GL +
Sbjct: 605 YAQINLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDD 664
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
++G +LL Y A ++F K+ V W+AMI G +L L+ +M
Sbjct: 665 EFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMR 724
Query: 525 NEEVQPNEVIFTTILSACS----------------HTG-----MVGEGWKCFYSMCRD-- 561
+ V P++ F + L AC+ HTG + Y+ C D
Sbjct: 725 SCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVK 784
Query: 562 -----FKFVPSMKHYV---CMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGC 610
FK + K + M+ A+ G E+AL + M + PD F L C
Sbjct: 785 SSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTAC 844
Query: 611 GLYSRFDLGEVMIKKMLELH--PDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
R G ++ M+ L+ +A + + +L GRW + + E + +
Sbjct: 845 SHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLL---GRWGSLKEAEEFINK 895
Score = 245 bits (625), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 153/479 (31%), Positives = 243/479 (50%), Gaps = 54/479 (11%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
C L+ MY + ARS+FD D S+ MI Y L ++ V+ ++ M K
Sbjct: 197 CEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVG 256
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+E PD +++ Y + ++
Sbjct: 257 QE----------------------------------PDQVAFVTVINAYVDLGRLDNASD 282
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F ++NVV+W MI+G+ + E + F MR+ ++ + TLGS+++A A L A
Sbjct: 283 LFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAA 342
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G +H LK G+ N ++ ++L+ MY KCG + A+ VFD L ++V W AM+ G
Sbjct: 343 LDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGG 402
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-ED 380
Y Q+GY ++ ++LF + K F+P+ T +S+LSA A L L++G +HS+ I+ +
Sbjct: 403 YVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASN 462
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---DDNVS---------- 427
V NALVDMYAK + DAR FE +D ++WN II G +D V
Sbjct: 463 LFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNL 522
Query: 428 ----PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
PD V+L S++SACAS+ ++ G +H S K G + +Y G++L++ YAKCG
Sbjct: 523 LGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTG-QETKLYSGSSLIDMYAKCGAID 581
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
SA + M E++ V+ +A+I GY Q + ++ LF DML E + E+ F ++L AC
Sbjct: 582 SAHKILACMPERSVVSMNALIAGYA-QINLEQAVNLFRDMLVEGINSTEITFASLLDAC 639
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 256/477 (53%), Gaps = 24/477 (5%)
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG 185
+Y I++ C++K + + +F ++ + + ++ +H + +K+G VL
Sbjct: 43 IYTHILQ--NCLQKSKQVKTHSLFDEIPQRLSQFSTTNK--IIHAQSLKLGFWSKGVLGN 98
Query: 186 -LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
+VD+YAKC D+ + + F + DK++++W S+++ + + + F + V
Sbjct: 99 VIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWP 158
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N+ T ++++CA+L + G+ +H ++K+G E S+ AL+ MY KC + DARS+F
Sbjct: 159 NEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIF 218
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D +D VSWT+MI GY + G P++A+K+F + + P+ V +V++A LG L+
Sbjct: 219 DGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLD 278
Query: 365 MGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
+ S R+ + N ++ +AK +A F+ + + + S
Sbjct: 279 NASDLFS---RMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRS------- 328
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
TL SV+SA ASL A+ G +HA + KQG L SNVYVG++L++ YAKCG ++
Sbjct: 329 -------TLGSVLSAIASLAALDFGLLVHAEALKQG-LHSNVYVGSSLVSMYAKCGKMEA 380
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A+ VFD + E+N V W+AM+GGY G + LF +M + P++ +++ILSAC+
Sbjct: 381 AKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACAC 440
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
+ G + +S+ KF ++ +VD+ A++G LE+A + E + +VS
Sbjct: 441 LKYLDLGHQ-LHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVS 496
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 234/723 (32%), Positives = 369/723 (51%), Gaps = 103/723 (14%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDG---------------------LTNDKCNTKLVSMYGS 92
+LL C+S +++ H +I G ++ T +V+ Y +
Sbjct: 36 SLLKECRSVNTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSPKSLGTGVVASYLA 95
Query: 93 FGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
G K A SV + + P+P + + +++R + + M + + D+F
Sbjct: 96 CGATKDALSVLERVTPSPAVW-WNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPY 154
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK- 209
LKAC EL G +H I G + FV LV MY++C + + VFDE K
Sbjct: 155 ALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKG 214
Query: 210 --NVVSWTSMIAGYVQNDCAQEGLVLFNRM------REGFVEGNQITLGSLVTACAKLRA 261
+V+SW S++A +V+ + L LF+ M + + I++ +++ ACA L+A
Sbjct: 215 IDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKA 274
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L Q K +H Y ++ G ++ + AL+D Y KCG++ DA VF+ + D+VSW AM+ G
Sbjct: 275 LPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTG 334
Query: 322 YTQSGYPDKALKLFTDKK----------WA----------------DFF---------PN 346
YTQSG A +LF + + W+ D F PN
Sbjct: 335 YTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPN 394
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-------------EDYTVINALVDMYAK 393
VTI S+LSA A LG L+ G +H+ ++ L ED V NAL+DMY+K
Sbjct: 395 SVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSK 454
Query: 394 CHVIADARYIFETTS--EKDVIAWNSIISGL----DDN---------------VSPDAVT 432
C AR IF++ E++V+ W +I G D N V+P+A T
Sbjct: 455 CRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYT 514
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALLNFYAKCGDAQSARMVFDA 491
+ ++ ACA L A+++G +HAY T+ +VY V L++ Y+KCGD +AR VFD+
Sbjct: 515 ISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDS 574
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
M ++N V+W++M+ GYGM G G +L +F M P+++ F +L ACSH+GMV +G
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCG 611
F M RD+ V S +HY C++DLLAR GRL++A + ++ MP+EP ++ A L C
Sbjct: 635 LNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACR 694
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 671
++S +L E + K++ + + Y L+SN+YA+ RW V ++R+LMK+ G+ K PGC
Sbjct: 695 VHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGC 754
Query: 672 SLV 674
S V
Sbjct: 755 SWV 757
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 343/652 (52%), Gaps = 26/652 (3%)
Query: 46 SLPSIPCLNLLGLCKSTGSL-KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFD 104
++ S C++L L +S +L + H + D ++K +LV GH+ AR +FD
Sbjct: 18 AVASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKT----GHLGNARRMFD 73
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR-KRLKEHDNFVFSKVLKACCELRDID 163
M D S+ +I Y + + + +K MR + D F+ S KAC D++
Sbjct: 74 KMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVN 133
Query: 164 EGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G +H VK G +S FV + L+DMY K I R+VF E +NVVSWT++I G V
Sbjct: 134 YGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLV 193
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
+ +E LV F+ M VE + T + ACA AL+ G+ +H +K G +++S
Sbjct: 194 RAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSF 253
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ L MY KCG + ++F+++ D+VSWT +I Q G + A++ F + +D
Sbjct: 254 VANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESD 313
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
PN T A+V+S A L + G +H+L + LGL +V N+++ MYAKC + +
Sbjct: 314 VSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSS 373
Query: 402 YIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLG 444
IF + +D+++W++II+G + P L SV+SAC ++
Sbjct: 374 VIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMA 433
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
++ G LHAY GL V +AL+N Y KCG + A +FDA + V+W+AMI
Sbjct: 434 ILEHGKQLHAYVLSIGL-EHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMI 492
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GY G + LF + ++P+ V F +LSACSH G+V G++ F +M + ++
Sbjct: 493 NGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQI 552
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
PS +HY CM+DLL RAGRL +A +E MP D ++ L C ++ + G +
Sbjct: 553 SPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAE 612
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++L+L P+ A ++ ++N+YAS G+W +R+LMK +G+ K PG S + +
Sbjct: 613 RILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKV 664
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 223/657 (33%), Positives = 347/657 (52%), Gaps = 39/657 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHV-------KYARSV 102
+++L C GS+ KA H L+ L ++ + L+ ++ HV + A V
Sbjct: 68 IDVLRDCAEKGSIREAKAVHGLV----LKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGV 123
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
FD MP + +S+ VMI + L+ D +F+ M D F +S ++++C L +
Sbjct: 124 FDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSL 183
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
+ G VH +IV G FV T L++MYAK I S VF+ + N VSW +MI+G
Sbjct: 184 ELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGC 243
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
N E LF RM+ G N TL S+ A KL ++ GK + ++GIE N
Sbjct: 244 TSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNV 303
Query: 282 HLVTALLDMYVKCGNIRDARSVFDEL---CSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ TAL+DMY KCG++ DARSVFD C ++ W AMI GY+QSG +AL+L+
Sbjct: 304 LVGTALIDMYSKCGSLHDARSVFDTNFINCGVN-TPWNAMISGYSQSGCSQEALELYVQM 362
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE--DYTVINALVDMYAKCHV 396
+ T SV +A A +L GR+VH + ++ GL+ +V NA+ D Y+KC
Sbjct: 363 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF 422
Query: 397 IADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISA 439
+ D R +F+ E+D+++W ++++ ++ +P+ T SV+ +
Sbjct: 423 LEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLIS 482
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
CASL ++ G +H K GL + + +AL++ YAKCG A VFD + + V+
Sbjct: 483 CASLCFLEYGRQVHGLLCKAGLDTEKC-IESALIDMYAKCGSITEAGKVFDKISNPDIVS 541
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+A+I GY G +L LF M ++ N V +L ACSH GMV EG F M
Sbjct: 542 WTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQME 601
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
+ VP M+HY C++DLL R GRL++A+EF+ MP+EP+ ++ L GC ++ +LG
Sbjct: 602 DGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELG 661
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
E+ +K+L + P+ + YVL+SN Y G + +R +MK +G+ K PG S + +
Sbjct: 662 EIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISV 718
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 213/657 (32%), Positives = 349/657 (53%), Gaps = 35/657 (5%)
Query: 49 SIPCLNLLGLCKSTGSLKAFHAL-LIVDGLT------NDKCNTKLVSMYGSFGHVKYARS 101
+ PCL K+ +LK F + + D ++ N+ + L+ Y +G +
Sbjct: 140 TFPCL-----VKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+FD + D + VM+ Y +++ + MR + F VL C
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 162 IDEGMKVHCEIVKVGGPD--SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
ID G+++H +V V G D + L+ MY+KC + ++F + V+W MI+
Sbjct: 255 IDLGVQLH-GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GYVQ+ +E L F M V + IT SL+ + +K L K +H YI++ I +
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ L +AL+D Y KC + A+++F + S+D+V +TAMI GY +G +L++F
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIA 398
PN +T+ S+L L L +GR +H I+ G ++ I A++DMYAKC +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDNVSP-----------------DAVTLVSVISACA 441
A IFE S++D+++WNS+I+ + +P D V++ + +SACA
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+L + G ++H + K L +S+VY + L++ YAKCG+ ++A VF M+EKN V+W+
Sbjct: 554 NLPSESFGKAIHGFMIKHSL-ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
++I G G SL LF +M+ + ++P+++ F I+S+C H G V EG + F SM
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
D+ P +HY C+VDL RAGRL EA E +++MP PD ++G L C L+ +L E
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAE 732
Query: 621 VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
V K+++L P + YYVL+SN +A+ W V +VR LMK+R + K PG S ++++
Sbjct: 733 VASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 213/468 (45%), Gaps = 25/468 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
S +L+AC + +G +VH IV DS+ ++ MYA C ++F L
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF-YRL 96
Query: 208 D---KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
D ++ W S+I+ +V+N + L + +M V + T LV AC L+
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+L + +G++ N + ++L+ Y++ G I +FD + D V W M+ GY +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
G D +K F+ + PN VT VLS A +++G +H L + G++ + ++
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
N+L+ MY+KC DA +F S D + WN +ISG + V
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PDA+T S++ + + ++ +H Y + +S ++++ +AL++ Y KC A+
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS-ISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F + V ++AMI GY G SL +F ++ ++ PNE+ +IL
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ G + + F ++D+ A+ GR+ A E E +
Sbjct: 456 ALKLGRE-LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 223/657 (33%), Positives = 347/657 (52%), Gaps = 39/657 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHV-------KYARSV 102
+++L C GS+ KA H L+ L ++ + L+ ++ HV + A V
Sbjct: 122 IDVLRDCAEKGSIREAKAVHGLV----LKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGV 177
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
FD MP + +S+ VMI + L+ D +F+ M D F +S ++++C L +
Sbjct: 178 FDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSL 237
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
+ G VH +IV G FV T L++MYAK I S VF+ + N VSW +MI+G
Sbjct: 238 ELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGC 297
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
N E LF RM+ G N TL S+ A KL ++ GK + ++GIE N
Sbjct: 298 TSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNV 357
Query: 282 HLVTALLDMYVKCGNIRDARSVFDEL---CSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ TAL+DMY KCG++ DARSVFD C ++ W AMI GY+QSG +AL+L+
Sbjct: 358 LVGTALIDMYSKCGSLHDARSVFDTNFINCGVN-TPWNAMISGYSQSGCSQEALELYVQM 416
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE--DYTVINALVDMYAKCHV 396
+ T SV +A A +L GR+VH + ++ GL+ +V NA+ D Y+KC
Sbjct: 417 CQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGF 476
Query: 397 IADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISA 439
+ D R +F+ E+D+++W ++++ ++ +P+ T SV+ +
Sbjct: 477 LEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLIS 536
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
CASL ++ G +H K GL + + +AL++ YAKCG A VFD + + V+
Sbjct: 537 CASLCFLEYGRQVHGLLCKAGLDTEKC-IESALIDMYAKCGSITEAGKVFDKISNPDIVS 595
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+A+I GY G +L LF M ++ N V +L ACSH GMV EG F M
Sbjct: 596 WTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQME 655
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
+ VP M+HY C++DLL R GRL++A+EF+ MP+EP+ ++ L GC ++ +LG
Sbjct: 656 DGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELG 715
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
E+ +K+L + P+ + YVL+SN Y G + +R +MK +G+ K PG S + +
Sbjct: 716 EIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISV 772
>gi|357143056|ref|XP_003572787.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Brachypodium distachyon]
Length = 594
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 216/593 (36%), Positives = 316/593 (53%), Gaps = 30/593 (5%)
Query: 106 MPNPDFYSF-QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
MP P S ++R Y Y++ V Y MR D+ F KAC LR
Sbjct: 1 MPQPVPVSLANSLLRSYTGLGHYREAVALYSGMRS----FDHLTFPFAAKACGGLRLSRH 56
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G VHC + G G D++V L+ MY C D+ ++ VF ++ VVSW ++IAG V+
Sbjct: 57 GRAVHCRALAAGFGDDTYVQNALISMYMGCGDVAAAEAVFCAMQNRTVVSWNAVIAGCVK 116
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
NDCA+ L +F M E ++ T+ S++ ACA+ + L G+ +H + + G+ + +
Sbjct: 117 NDCAERALEVFGEMAGDGTEIDRATVVSVLPACAQAKNLSIGRAVHQLVEERGLADYAAV 176
Query: 284 VTALLDMYVKCGNIRDARSVFDE-LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
AL+DMY KC N+ AR VFD+ D+VSWT MI Y + + ++A L +
Sbjct: 177 KNALIDMYGKCRNLEGARKVFDDHKYDKDVVSWTVMIGAYVLNDHVEEAFALGHEMLMTS 236
Query: 343 F--FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
+PN VT+A +LSA ++L + + +H++ IRLGLE D V AL+D YAKCH +
Sbjct: 237 GAPWPNGVTMAYLLSACSRLSGRH-AKCMHAMCIRLGLESDIIVETALMDAYAKCHNMKM 295
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACAS 442
E S + WN+ ISG N PD+ T+ S++ A A
Sbjct: 296 MELTLENGSRR-TETWNATISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAYAE 354
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
V+ +++H Y G L S + T L+N YAK GD + +FD + EK+ V W+
Sbjct: 355 SADVRQATNIHCYLLTLGFLRST-EITTGLINVYAKAGDLDVSWSLFDGLPEKDVVAWTT 413
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
+I GYGM G S+ L++ M+ V+PN V F ++L ACSH GMV EG + F M
Sbjct: 414 VIAGYGMHGQAQTSILLYNRMVQLGVKPNTVTFASLLYACSHVGMVDEGLQLFEDMRGIH 473
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
+P+ HY +VD++ RAGR+EEA +E+MP+EP S++GA L C L+ GEV
Sbjct: 474 GVMPNADHYSSLVDMVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGACVLHKNVKFGEVA 533
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
K + EL P +VL+ N+YA+ RW V VR M ++GLSK G SLV+
Sbjct: 534 AKHLFELEPKNTGNHVLLGNIYAAADRWSDVQDVRRRMAEKGLSKESGSSLVE 586
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 226/467 (48%), Gaps = 30/467 (6%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+A H + G +D L+SMY G V A +VF +M N S+ +I N
Sbjct: 58 RAVHCRALAAGFGDDTYVQNALISMYMGCGDVAAAEAVFCAMQNRTVVSWNAVIAGCVKN 117
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVL 183
D + +E + M E D VL AC + +++ G VH + + G D + V
Sbjct: 118 DCAERALEVFGEMAGDGTEIDRATVVSVLPACAQAKNLSIGRAVHQLVEERGLADYAAVK 177
Query: 184 TGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR--MREG 240
L+DMY KCR++ +R+VFD+ DK+VVSWT MI YV ND +E L + M G
Sbjct: 178 NALIDMYGKCRNLEGARKVFDDHKYDKDVVSWTVMIGAYVLNDHVEEAFALGHEMLMTSG 237
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
N +T+ L++AC++L H K +H +++G+E + + TAL+D Y KC N++
Sbjct: 238 APWPNGVTMAYLLSACSRLSGRH-AKCMHAMCIRLGLESDIIVETALMDAYAKCHNMKMM 296
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
E S +W A I GYT + KA++L P+ T+AS+L A A+
Sbjct: 297 ELTL-ENGSRRTETWNATISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAYAES 355
Query: 361 GNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
++ +H + LG L + L+++YAK + + +F+ EKDV+AW ++I
Sbjct: 356 ADVRQATNIHCYLLTLGFLRSTEITTGLINVYAKAGDLDVSWSLFDGLPEKDVVAWTTVI 415
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL- 461
+G + V P+ VT S++ AC+ +G V G L + +G+
Sbjct: 416 AGYGMHGQAQTSILLYNRMVQLGVKPNTVTFASLLYACSHVGMVDEG--LQLFEDMRGIH 473
Query: 462 -LSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGG 506
+ N ++L++ + G + A R++ D E +T W A++G
Sbjct: 474 GVMPNADHYSSLVDMVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGA 520
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 117/265 (44%), Gaps = 10/265 (3%)
Query: 1 MKLISL-LQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLC 59
MK++ L L+ RT+ + +++ Q+ L + A S ++L
Sbjct: 293 MKMMELTLENGSRRTETWNATISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAY 352
Query: 60 KSTGSLKA---FHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
+ ++ H L+ G L + + T L+++Y G + + S+FD +P D ++
Sbjct: 353 AESADVRQATNIHCYLLTLGFLRSTEITTGLINVYAKAGDLDVSWSLFDGLPEKDVVAWT 412
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
+I Y ++ + + Y M + + + F+ +L AC + +DEG+++ ++ +
Sbjct: 413 TVIAGYGMHGQAQTSILLYNRMVQLGVKPNTVTFASLLYACSHVGMVDEGLQLFEDMRGI 472
Query: 176 GG--PDSFVLTGLVDMYAKCRDIGSS-RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
G P++ + LVDM + I + R + D L+ + W +++ V + + G V
Sbjct: 473 HGVMPNADHYSSLVDMVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGACVLHKNVKFGEV 532
Query: 233 LFNRM--REGFVEGNQITLGSLVTA 255
+ E GN + LG++ A
Sbjct: 533 AAKHLFELEPKNTGNHVLLGNIYAA 557
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 218/674 (32%), Positives = 347/674 (51%), Gaps = 43/674 (6%)
Query: 51 PCL-NLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN 108
PCL G K H L+ G D L+ MY G A +F+ M
Sbjct: 43 PCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEE 102
Query: 109 PDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKE-----HDNFVFSKVLKACCELRDI 162
D S+ MI + + D K +V F R+ +KE H+ L +C ++ +
Sbjct: 103 RDSVSWNTMISGFCQSGDYVKSLVMF----RRMVKECGGSYHNRVACLAALSSCASIKCL 158
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD-----ETLDKNVVSWTS 216
G+++H +VK G D F+++ L++MY KC DI ++ VF+ E + +N+ W
Sbjct: 159 THGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNV 218
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
MI GYV N+C L LF M E + + T+ ++ C++L L GK +HG IL +G
Sbjct: 219 MILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLG 278
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
++ + + TAL++MY KCG+ + +F + +LV W ++++ Q+GYP++AL+ F+
Sbjct: 279 LDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFS 338
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ FP+ V + + L A + L G +H I++G + D V ALVD Y KC
Sbjct: 339 EFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCG 398
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVIS 438
+ A+ +F S +D+++WN++ISG N + P+ VT+ ++S
Sbjct: 399 DMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILS 458
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
C L + + +H Y + +N V +L++ YAKCGD S+R VF+ + +N V
Sbjct: 459 VCTHLSVMILCKEVHCYLLRH-WFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEV 517
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
TW++++ G+GM G A F M ++P+ FT++LS+CSH+G V GWK F SM
Sbjct: 518 TWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSM 577
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
D+ P ++ Y CMVDLL RAG L +A + + +MP PD ++G+ L C + L
Sbjct: 578 MEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKL 637
Query: 619 GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD- 677
EV+ + EL Y VL++NLY G V +VR +KQ GL K PGCS +++D
Sbjct: 638 AEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDN 697
Query: 678 -----IANDFSFSR 686
+A D+S R
Sbjct: 698 SIHIFVAGDYSHDR 711
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 162/576 (28%), Positives = 295/576 (51%), Gaps = 53/576 (9%)
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDS 180
F D + ++F +C + F ++KA L D+++G ++H ++K G D
Sbjct: 18 FFEDAIRVYLDFIEC---GFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKFGFLQDI 74
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE- 239
FV L+ MY KC G++ +F+ +++ VSW +MI+G+ Q+ + LV+F RM +
Sbjct: 75 FVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMVKE 134
Query: 240 -GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
G N++ + +++CA ++ L G +HG+++K G++ + LV+AL++MY+KCG+I+
Sbjct: 135 CGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIK 194
Query: 299 DARSVFD-----ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
+A +VF+ EL ++ W MI+GY + AL+LF + P+ T+ V
Sbjct: 195 NAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVV 254
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDV 412
L +QL +L +G+ +H L + LGL +D V AL++MY KC + IF+ + ++
Sbjct: 255 LVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNL 314
Query: 413 IAWNSIISGLDDNVS-----------------PDAVTLVSVISACASLGAVQVGSSLHAY 455
+ W S++ N PD V L++ + AC+ L G ++H +
Sbjct: 315 VMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHGF 374
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
+ K G S+V+VG AL++FY KCGD + A+ VF + ++ V+W+A+I G+
Sbjct: 375 AIKMG-FDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADE 433
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--- 572
+L F DM +++++PN V ILS C+H ++ +C++ ++H+
Sbjct: 434 ALKAFRDMQSKQIKPNTVTMACILSVCTHLSVM--------ILCKEVH-CYLLRHWFETN 484
Query: 573 -----CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
++ A+ G + + E +P+ +V+ + + L G G++ R D +KM
Sbjct: 485 ALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVT-WNSILLGFGMHGRTDEMFATFEKMK 543
Query: 628 E--LHPDKACYYVLVSNLYAS---DGRWIRVNQVRE 658
E + PD + L+S+ S D W N + E
Sbjct: 544 EANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMME 579
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 350/662 (52%), Gaps = 30/662 (4%)
Query: 38 DQTFASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSF 93
Q A+ ++ PS+ L C G L + H +I G D NT L+S+YG
Sbjct: 93 QQIQANSYTFPSV-----LRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGEL 147
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G++ AR VF MP D S+ +I N + ++ ++CM D+ + V+
Sbjct: 148 GYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVV 207
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
+AC EL + H I+K G D FV + L+ MYAKC + S+ VF+ ++
Sbjct: 208 EACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTS 267
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+WT+MI+ Y +E L LF M++ VE N +T+ ++ +C L L +GK +H +
Sbjct: 268 TWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVV 327
Query: 273 LKIGIEINSH-LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
+K ++ N L LL++Y + E+ + W +I Y Q G +
Sbjct: 328 IKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKET 387
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMY 391
+ LF + F P+ ++AS LSAS G L +G +H I+ D V N+L++MY
Sbjct: 388 VDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLINMY 447
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-VSPDAVTL----------------V 434
+KC + A IF+ K V+ WNS+ISGL N S A++L V
Sbjct: 448 SKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFV 507
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
SVI AC+ LG ++ G +H G+ +++ TAL++ YAKCGD Q+A+ VFD M E
Sbjct: 508 SVIQACSHLGFLEKGKWIHHKLITCGVRKC-IFIETALVDMYAKCGDLQTAQRVFDNMSE 566
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
++ V+WS++I YG+ G + LFS ML ++PN+V +LSACSH G V EG
Sbjct: 567 RSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLF 626
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYS 614
F SM RDF P +H+VC+VDLL+RAG L+EA E ++ MP P S++GA L+GC ++
Sbjct: 627 FNSM-RDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQ 685
Query: 615 RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
R D+ + + +++ + D +Y L+SN+YA+ G W +VR +MK GL K P S+V
Sbjct: 686 RMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVV 745
Query: 675 DL 676
+L
Sbjct: 746 EL 747
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 179/589 (30%), Positives = 291/589 (49%), Gaps = 33/589 (5%)
Query: 65 LKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
L HA +IV L ND +TKL+ Y G ++ + SVF + +PD + + V+++ +
Sbjct: 17 LAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHVW 76
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
N Y++ + Y M + + +++ F VL+AC D+ G +VH I+K G D V
Sbjct: 77 NGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPVV 136
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+ +Y + + S+R+VF E +++VSW+S+I+ V+N EGL F M
Sbjct: 137 NTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGG 196
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + + ++V AC +L L K HGYILK GIE + + ++L+ MY KCG++R A
Sbjct: 197 TPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEI 256
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VF+ + +WTAMI Y GY +AL LF + + PN VT+ +L + L
Sbjct: 257 VFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSL 316
Query: 363 LNMGRMVHSLGIRLGLEDY--TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L G+ VH + I+ L+ + L+++YA I + + WN++IS
Sbjct: 317 LREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLIS 376
Query: 421 -----GL------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
GL PD+ +L S +SA + G +Q+G +H + K+ +
Sbjct: 377 VYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMD 436
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
YV +L+N Y+KCG A M+FD M K VTW++MI G G +++LF M
Sbjct: 437 E--YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLM 494
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEG-W---KCFYSMCRDFKFVPSMKHYVCMVDLLA 579
+ EV F +++ ACSH G + +G W K R F+ + +VD+ A
Sbjct: 495 YVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIET-----ALVDMYA 549
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+ G L+ A +NM E V + + + G++ + + KMLE
Sbjct: 550 KCGDLQTAQRVFDNMS-ERSVVSWSSLISSYGVHGQISEVIFLFSKMLE 597
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 163/318 (51%), Gaps = 22/318 (6%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L A LR L Q LH +I+ + + T L++ Y + G+++ + SVF S D
Sbjct: 7 LFKASTTLRQLAQ---LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPD 63
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
W ++ + +G +A+ L+ N T SVL A + G+L +G+ VH
Sbjct: 64 SFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHG 123
Query: 372 LGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAW----------NSIIS 420
I+ G + V+N AL+ +Y + + AR +F +D+++W I
Sbjct: 124 RIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINE 183
Query: 421 GLD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
GLD + +PD+V +++V+ AC LG +++ S H Y K+G + ++ +V ++L+
Sbjct: 184 GLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRG-IENDRFVDSSLI 242
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
YAKCG +SA +VF+ + ++T TW+AMI Y + G +LALF M EV+PN V
Sbjct: 243 FMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSV 302
Query: 534 IFTTILSACSHTGMVGEG 551
IL +C++ ++ EG
Sbjct: 303 TMRIILRSCTNLSLLREG 320
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 228/662 (34%), Positives = 350/662 (52%), Gaps = 30/662 (4%)
Query: 38 DQTFASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSF 93
Q A+ ++ PS+ L C G L + H +I G D NT L+S+YG
Sbjct: 93 QQIQANSYTFPSV-----LRACSGFGDLGVGQRVHGRIIKSGFDMDPVVNTALLSVYGEL 147
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G++ AR VF MP D S+ +I N + ++ ++CM D+ + V+
Sbjct: 148 GYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEGGTPDSVLVLTVV 207
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
+AC EL + H I+K G D FV + L+ MYAKC + S+ VF+ ++
Sbjct: 208 EACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTS 267
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+WT+MI+ Y +E L LF M++ VE N +T+ ++ +C L L +GK +H +
Sbjct: 268 TWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVV 327
Query: 273 LKIGIEINSH-LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
+K ++ N L LL++Y + E+ + W +I Y Q G +
Sbjct: 328 IKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKET 387
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMY 391
+ LF + F P+ ++AS LSAS G L +G +H I+ D V N+L++MY
Sbjct: 388 VDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMDEYVFNSLINMY 447
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-VSPDAVTL----------------V 434
+KC + A IF+ K V+ WNS+ISGL N S A++L V
Sbjct: 448 SKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFV 507
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
SVI AC+ LG ++ G +H G+ +++ TAL++ YAKCGD Q+A+ VFD M E
Sbjct: 508 SVIQACSHLGFLEKGKWIHHKLITCGVRKC-IFIETALVDMYAKCGDLQTAQRVFDNMSE 566
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
++ V+WS++I YG+ G + LFS ML ++PN+V +LSACSH G V EG
Sbjct: 567 RSVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLF 626
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYS 614
F SM RDF P +H+VC+VDLL+RAG L+EA E ++ MP P S++GA L+GC ++
Sbjct: 627 FNSM-RDFGIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQ 685
Query: 615 RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
R D+ + + +++ + D +Y L+SN+YA+ G W +VR +MK GL K P S+V
Sbjct: 686 RMDIAKNIQRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVV 745
Query: 675 DL 676
+L
Sbjct: 746 EL 747
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 179/590 (30%), Positives = 292/590 (49%), Gaps = 33/590 (5%)
Query: 64 SLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+L HA +IV L ND +TKL+ Y G ++ + SVF + +PD + + V+++ +
Sbjct: 16 TLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLKSHV 75
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N Y++ + Y M + + +++ F VL+AC D+ G +VH I+K G D
Sbjct: 76 WNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDMDPV 135
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V T L+ +Y + + S+R+VF E +++VSW+S+I+ V+N EGL F M
Sbjct: 136 VNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMVSEG 195
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + + ++V AC +L L K HGYILK GIE + + ++L+ MY KCG++R A
Sbjct: 196 GTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAE 255
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF+ + +WTAMI Y GY +AL LF + + PN VT+ +L + L
Sbjct: 256 IVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLS 315
Query: 362 NLNMGRMVHSLGIRLGLEDY--TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
L G+ VH + I+ L+ + L+++YA I + + WN++I
Sbjct: 316 LLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLI 375
Query: 420 S-----GL------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
S GL PD+ +L S +SA + G +Q+G +H + K+ +
Sbjct: 376 SVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFM 435
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
YV +L+N Y+KCG A M+FD M K VTW++MI G G +++LF
Sbjct: 436 DE--YVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDL 493
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEG-W---KCFYSMCRDFKFVPSMKHYVCMVDLL 578
M + EV F +++ ACSH G + +G W K R F+ + +VD+
Sbjct: 494 MYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGVRKCIFIET-----ALVDMY 548
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
A+ G L+ A +NM E V + + + G++ + + KMLE
Sbjct: 549 AKCGDLQTAQRVFDNMS-ERSVVSWSSLISSYGVHGQISEVIFLFSKMLE 597
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 203/581 (34%), Positives = 318/581 (54%), Gaps = 58/581 (9%)
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYA--KCRD 195
K L+ H + +L C +++ + +H +I+K G ++ F L+ L++ A +
Sbjct: 28 KLLQNHPSLT---LLSTCKSFQNLKQ---IHSQIIKTGLHNTQFALSKLIEFCAISPFGN 81
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+ + +F+ N W +MI G + + + RM VE N T L+ +
Sbjct: 82 LSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKS 141
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN------------------- 296
CAK+ A +GK +HG++LK+G+E + + T+L++MY + G
Sbjct: 142 CAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSF 201
Query: 297 ------------IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+ DAR +F+E+ D VSW AMI GY QSG ++AL F + K A+
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYI 403
PN T+ +VLSA AQ G+L +G V S GL + ++NAL+DMY+KC + AR +
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDL 321
Query: 404 FETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV 446
FE EKD+I+WN +I G NV P+ VT VS++ ACA LGA+
Sbjct: 322 FEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGAL 381
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+G +HAY K+ L +N + T+L++ YAKCG+ ++A+ VF M+ K+ +W+AMI G
Sbjct: 382 DLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISG 441
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
M G +L LF M +E +P+++ F +LSACSH G+V G +CF SM D+ P
Sbjct: 442 LAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISP 501
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++HY CM+DLL RAG +EA M+NM ++PD +++G+ L C ++ +LGE K +
Sbjct: 502 KLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHL 561
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
EL P+ YVL+SN+YA+ GRW V ++R + +G+ K
Sbjct: 562 FELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 181/614 (29%), Positives = 294/614 (47%), Gaps = 100/614 (16%)
Query: 32 PTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSM- 89
PT H + + L + P L LL CKS +LK H+ +I GL N + +KL+
Sbjct: 15 PTLHFQPTSDPPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFC 74
Query: 90 -YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
FG++ YA +F+S+ P+ + + MIR L+ ++FY M E +++
Sbjct: 75 AISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYT 134
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG---------- 197
F +LK+C ++ EG ++H ++K+G D FV T L++MYA+ ++G
Sbjct: 135 FPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSS 194
Query: 198 ---------------------SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
+R++F+E ++ VSW +MIAGY Q+ +E L F
Sbjct: 195 LRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQE 254
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M+ V N+ T+ ++++ACA+ +L G W+ +I G+ N LV AL+DMY KCG+
Sbjct: 255 MKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGD 314
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ AR +F+ +C D++SW MI GY+ +AL LF + ++ PN VT S+L A
Sbjct: 315 LDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPA 374
Query: 357 SAQLGNLNMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A LG L++G+ +H+ + LGL + ++ +L+DMYAKC I A+ +F K + +
Sbjct: 375 CAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGS 434
Query: 415 WNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
WN++ISGL D+ PD +T V V+SAC+ G V++G
Sbjct: 435 WNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG-------- 486
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
R F +M E + S + YG D G
Sbjct: 487 ----------------------------RQCFSSMVEDYDI--SPKLQHYGCMIDLLGRA 516
Query: 518 ALFSD----MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK-HYV 572
LF + M N E++P+ I+ ++L AC G V G ++ F+ P YV
Sbjct: 517 GLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELG---EFAAKHLFELEPENPGAYV 573
Query: 573 CMVDLLARAGRLEE 586
+ ++ A AGR ++
Sbjct: 574 LLSNIYATAGRWDD 587
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 214/652 (32%), Positives = 342/652 (52%), Gaps = 26/652 (3%)
Query: 46 SLPSIPCLNLLGLCKSTGSL-KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFD 104
++ S C++L L +S +L + H + D ++K +LV GH+ AR +FD
Sbjct: 18 AVASTECIDLQVLERSNDNLSQNIHFISQTDLPESNKQLKELVKT----GHLGNARRMFD 73
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR-KRLKEHDNFVFSKVLKACCELRDID 163
M D S+ +I Y + + + +K MR + D F+ S KAC D++
Sbjct: 74 KMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVN 133
Query: 164 EGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G +H VK G +S FV + L+DMY K I R+VF E +NVVSWT++I G V
Sbjct: 134 YGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLV 193
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
+ +E LV F+ M VE + T + ACA AL+ G+ +H +K G +++S
Sbjct: 194 RAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSF 253
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ L MY KCG + ++F+++ D+VSWT +I Q G + A++ F + +D
Sbjct: 254 VANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESD 313
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
PN T A+V+S A L + G +H+L + LGL +V N+++ MYAKC + +
Sbjct: 314 VSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSS 373
Query: 402 YIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLG 444
IF + +D+++W++II+G + P L SV+SAC ++
Sbjct: 374 VIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMA 433
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
++ G LHAY GL V +AL+N Y KCG + A +FDA + V+W+AMI
Sbjct: 434 ILEHGKQLHAYVLSIGL-EHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMI 492
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GY G + LF + ++P+ V F +LSACSH G+V G+ F +M + ++
Sbjct: 493 NGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQI 552
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
PS +HY CM+DLL RAGRL +A +E MP D ++ L C ++ + G +
Sbjct: 553 SPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAE 612
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++L+L P+ A ++ ++N+YAS G+W +R+LMK +G+ K PG S + +
Sbjct: 613 RILQLEPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKV 664
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 217/652 (33%), Positives = 351/652 (53%), Gaps = 29/652 (4%)
Query: 53 LNLLGLCKSTGSLKA---FHALLIVDGLTND--KCNTKLVSMYGSFGHVKYARSVFDSMP 107
L LL C ++ SLK H ++ GL ND C T L++ Y S +A+ VFD+M
Sbjct: 7 LPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKT-LINQYLSCHLYDHAKCVFDNME 65
Query: 108 NP-DFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
NP + + ++ Y N +Y + +E F K + + D++ + V KAC L G
Sbjct: 66 NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLG 125
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H ++K G D V + LV MY KC + +F+E +K+V W ++I+ Y Q+
Sbjct: 126 KMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
++ L F MR E N +T+ + +++CA+L L++G +H ++ G ++S +
Sbjct: 186 GNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS 245
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+AL+DMY KCG++ A +F+++ +V+W +MI GY G ++LF
Sbjct: 246 SALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVK 305
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P T++S++ ++ L G+ VH IR ++ D V ++L+D+Y KC + A I
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKI 365
Query: 404 FETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV 446
F+ + V++WN +ISG V DA+T SV++AC+ L A+
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAAL 425
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ G +H ++ L ++ V +G ALL+ YAKCG A VF + +++ V+W++MI
Sbjct: 426 EKGKEIHNLIIEKKLDNNEVVMG-ALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITA 484
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
YG G G+L LF++ML V+P+ V F ILSAC H G+V EG F M + +P
Sbjct: 485 YGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIP 544
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMP-IEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
++HY C++DLL RAGRL EA E ++ P I DV L C L+ DLG + +
Sbjct: 545 RVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIART 604
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+++ PD + Y+L+SN+YAS +W V VR MK+ GL K+PGCS ++++
Sbjct: 605 LIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEIN 656
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 214/668 (32%), Positives = 363/668 (54%), Gaps = 30/668 (4%)
Query: 37 LDQTFASFHSLP---SIPCLNLLGLCKSTGSLKA---FHALLIVDG---LTNDKCNTKLV 87
LD AS +LP S C LL C + G +A HA ++ G + C L+
Sbjct: 33 LDDELASL-ALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLL 91
Query: 88 SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
++Y G + AR +FD MP + SF +++ Y L +++ ++ +++ E ++F
Sbjct: 92 NLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHF 151
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
V + +LK + +H K+G ++FV + L+D Y+ C + +R VFD
Sbjct: 152 VLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGI 211
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ K+ V+WT+M++ Y +ND ++ L F++MR + N L S++ A L + GK
Sbjct: 212 IWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGK 271
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG +K + H+ ALLDMY KCG I DAR+VF+ + D++ W+ +I Y QS
Sbjct: 272 GIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSY 331
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
++A ++F + PN +++ VL A A + L++G+ +H+L I+LG E + V N
Sbjct: 332 QNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGN 391
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-LDDNVSPDA-------------- 430
AL+D+YAKC + ++ IF + + + ++WN+II G + DA
Sbjct: 392 ALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLS 451
Query: 431 --VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
VT SV+ ACA+ +++ +H+ ++ +++ V +L++ YAKCG + A V
Sbjct: 452 TQVTFSSVLRACANTASIKHTVQIHSL-IEKSTFNNDTIVCNSLIDTYAKCGCIRDALKV 510
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+++ + + V+W+A+I GY + G +L LF+ M + +PN+V F +LS C TG+V
Sbjct: 511 FESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLV 570
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
+G F SM D + PSM HY C+V LL RAGRL +AL+F+ ++P P ++ A L
Sbjct: 571 NQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLS 630
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C ++ LG+ +K+LE+ P YVL+SN+YA+ G +V +R+ M+ G+ K
Sbjct: 631 SCVVHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKE 690
Query: 669 PGCSLVDL 676
G S V++
Sbjct: 691 VGLSWVEI 698
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 211/671 (31%), Positives = 350/671 (52%), Gaps = 32/671 (4%)
Query: 37 LDQTFASFHSLPSIP------CLNLLGLCKSTGSLK---AFHALLIVDGLTNDK---CNT 84
L+ S LPS+P C L C + G + A H ++ G C
Sbjct: 41 LEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCAN 100
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L++MYG G + AR +FD MP + SF +++ + ++ ++ +R E
Sbjct: 101 VLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEV 160
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ FV + +LK + VH K+G ++FV +GL+D Y+ C + + VF
Sbjct: 161 NQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVF 220
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ + K+ V WT+M++ Y +NDC + +F++MR + N L S++ A L ++
Sbjct: 221 NGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVV 280
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +HG +K + H+ ALLDMY KCG+I+DAR F+ + D++ + MI Y
Sbjct: 281 LGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYA 340
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
QS ++A +LF + PN +++SVL A + L+ G+ +H+ I++G E D
Sbjct: 341 QSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLF 400
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NAL+D YAKC+ + + IF + + + ++WN+I+ G +
Sbjct: 401 VGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ 460
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ VT SV+ ACAS +++ +H S ++ +++ +G +L++ YAKCG + A
Sbjct: 461 MPCTQVTYSSVLRACASTASIRHAGQIHC-SIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF + E++ ++W+A+I GY + G +L LF M V+ N++ F +LS CS T
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V G F SM D PSM+HY C+V LL RAGRL +AL+F+ ++P P ++ A
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ LG +K+LE+ P YVL+SN+YA+ G +V +R+ M+ G+
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGV 699
Query: 666 SKSPGCSLVDL 676
K PG S V++
Sbjct: 700 RKVPGLSWVEI 710
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 212/647 (32%), Positives = 340/647 (52%), Gaps = 31/647 (4%)
Query: 53 LNLLGLCKSTGSLK---AFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
LN + LCK L FH L + + L+ +Y G++ A+ +FD +P
Sbjct: 190 LNNVPLCKMVHELARSMGFHMDLFI--------GSSLIKLYTDNGYIHDAKYLFDELPVR 241
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
D + VM+ Y N + + ++ MR + ++ F +L C + G+++H
Sbjct: 242 DCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLH 301
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+++ G D V ++ MY+KC ++ +R++FD + V+W +IAGYVQN
Sbjct: 302 GLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTD 361
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E + LF M V+ + IT S + + K +L K +H YI++ G+ + +L +AL+
Sbjct: 362 EAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALV 421
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
D+Y K G++ A F + +D+ TAMI GY +G +AL LF PN +
Sbjct: 422 DIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCL 481
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETT 407
T+ASVL A A L +L +G+ +H ++ GLE+ V +++ MYAK + A F
Sbjct: 482 TMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRM 541
Query: 408 SEKDVIAWNSIISGLDDNVSP-----------------DAVTLVSVISACASLGAVQVGS 450
KD + WN +I N P D+V+L + +SACA+ A+ G
Sbjct: 542 PVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGK 601
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
LH + + +S + +V + L++ Y+KCG AR VFD M KN V+W+++I YG
Sbjct: 602 ELHCFVVRNSFIS-DTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNH 660
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G L LF +M+ +QP+ V F I+SAC H G+V EG F M ++ M+H
Sbjct: 661 GRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEH 720
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
+ CMVDL RAGRL EA + +++MP PD +G+ L C L+ +L ++ K ++EL
Sbjct: 721 FACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELD 780
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P+ + YYVL+SN++A G W V +VR LMK++G+ K PG S +D++
Sbjct: 781 PNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVN 827
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 256/522 (49%), Gaps = 32/522 (6%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQV 202
D + F V+KAC L ++ VH E+ + G D F+ + L+ +Y I ++ +
Sbjct: 176 DKYTFPYVIKACGGLNNVPLCKMVH-ELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYL 234
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FDE ++ + W M+ GYV+N L F MR V+ N ++ L++ CA +
Sbjct: 235 FDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIV 294
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G LHG +++ G E + + ++ MY KCGN+ DAR +FD + D V+W +I GY
Sbjct: 295 RAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGY 354
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
Q+G+ D+A+ LF + + +T AS L + + G+L + VHS +R G+ D
Sbjct: 355 VQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDV 414
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDD 424
+ +ALVD+Y K + A F+ + DV ++ISG + +
Sbjct: 415 YLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQE 474
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV-YVGTALLNFYAKCGDAQ 483
+ P+ +T+ SV+ ACA+L ++++G LH K+GL NV VG+++ YAK G
Sbjct: 475 GMVPNCLTMASVLPACAALASLKLGKELHCDILKKGL--ENVCQVGSSITYMYAKSGRLD 532
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A F M K++V W+ MI + G ++ LF M + + V + LSAC+
Sbjct: 533 LAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACA 592
Query: 544 HTGMV--GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
+ + G+ CF + R+ F+ ++D+ ++ G+L A + M + +VS
Sbjct: 593 NYPALYYGKELHCF--VVRN-SFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVS 649
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ + + G + R + +M+E + PD + V++S
Sbjct: 650 -WNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMS 690
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/460 (26%), Positives = 212/460 (46%), Gaps = 35/460 (7%)
Query: 167 KVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H +++ G S L + ++ MY CR +F + W +I G+
Sbjct: 97 QIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLG 156
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
C L+ F RM V ++ T ++ AC L + K +H +G ++ + +
Sbjct: 157 CFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGS 216
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+L+ +Y G I DA+ +FDEL D + W M+ GY ++G + AL F + + + P
Sbjct: 217 SLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP 276
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
N V+ +LS A G + G +H L IR G E D TV N ++ MY+KC + DAR IF
Sbjct: 277 NSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIF 336
Query: 405 ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQ 447
+ + D + WN +I+G N V D++T S + + G+++
Sbjct: 337 DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLK 396
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+H+Y + G + +VY+ +AL++ Y K GD + A F + +AMI GY
Sbjct: 397 YCKEVHSYIVRHG-VPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGY 455
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG--MVGEGWKCFYSMCRDFKFV 565
+ G +L LF ++ E + PN + ++L AC+ +G+ C +
Sbjct: 456 VLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHC--------DIL 507
Query: 566 PSMKHYVCMVD-----LLARAGRLEEALEFMENMPIEPDV 600
VC V + A++GRL+ A +F MP++ V
Sbjct: 508 KKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSV 547
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 148/302 (49%), Gaps = 19/302 (6%)
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
Q + +H +L G+ + L + +L MYV C + +D ++F L + W +I G+
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
+ G D AL F ++ P+ T V+ A L N+ + +MVH L +G D
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
+ ++L+ +Y I DA+Y+F+ +D I WN +++G N
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNS 272
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V P++V+ V ++S CA+ G V+ G LH + G S+ V ++ Y+KCG+
Sbjct: 273 CVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSG-FESDPTVANTIITMYSKCGNLFD 331
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR +FD M + +TVTW+ +I GY G ++ALF M+ V+ + + F + L +
Sbjct: 332 ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLK 391
Query: 545 TG 546
+G
Sbjct: 392 SG 393
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 310/537 (57%), Gaps = 23/537 (4%)
Query: 159 LRDIDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
+R + G ++H + + G DS V T ++ MYA+C ++ +++Q+F E +++V+W++
Sbjct: 1 MRALGRGTEIH-DFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSA 59
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
+IA +VQ+ QE L LF M+ ++ N++ L S + ACA++ +L GK +H +K
Sbjct: 60 IIAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKAN 119
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
++++ + TAL+ MY KCG A ++F+ + D+V+W AMI GY Q G P AL++F
Sbjct: 120 VDLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFH 179
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ ++ PN T+ +L A A L +L+ G +H I+ G E + V AL+DMYAKC
Sbjct: 180 KLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCG 239
Query: 396 VIADARYIFETTS-EKDVIAWNSIISG-------LD----------DNVSPDAVTLVSVI 437
++ A ++F T KD ++WN +I+G +D +N+ P+ VT+V+V+
Sbjct: 240 SLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVL 299
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
A A L A++ G +LHAY + G S VG L++ YAKCG + +F M+ K+T
Sbjct: 300 PAVAHLSALRAGMTLHAYVIRMGF-QSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDT 358
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V+W+ M+ GY + G G ++ LFS M + E++ + F +LSAC H G++GEG K F S
Sbjct: 359 VSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDS 418
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
M + + P ++HY CM DLL RAG E L+ +++MP+EPD ++GA L ++S
Sbjct: 419 MSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQ 478
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
L E + + +L +Y +SN YA GRW V R + + GL KSPG S V
Sbjct: 479 LAEFALHHLDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 212/450 (47%), Gaps = 21/450 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T +++MY G V A+ +F + D ++ +I + + ++ + ++ M+ +
Sbjct: 27 TPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQ 86
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
+ + L AC E+ + G +HC VK D V T LV MYAKC + +
Sbjct: 87 ANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTL 146
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ K+VV+W +MI GY Q L +F++++ + N T+ L+ A A L L
Sbjct: 147 FNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLSELNPNSGTMVGLLPAFALLNDL 206
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVG 321
QG +HG I+K G E H+ TAL+DMY KCG++ A +F C D VSW MI G
Sbjct: 207 DQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAG 266
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Y SG+ A F K + PN VTI +VL A A L L G +H+ IR+G +
Sbjct: 267 YMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSK 326
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------D 423
T + N L+DMYAKC + + IF KD ++WN +++G D
Sbjct: 327 TPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQD 386
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ D+ + ++V+SAC G + G + +KQ L ++ + + + G
Sbjct: 387 SEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFN 446
Query: 484 SARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ +M E + W A++G M +
Sbjct: 447 EVLDLIKSMPMEPDAGVWGALLGASTMHSN 476
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 211/671 (31%), Positives = 350/671 (52%), Gaps = 32/671 (4%)
Query: 37 LDQTFASFHSLPSIP------CLNLLGLCKSTGSLK---AFHALLIVDGLTNDK---CNT 84
L+ S LPS+P C L C + G + A H ++ G C
Sbjct: 41 LEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCAN 100
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L++MYG G + AR +FD MP + SF +++ + ++ ++ +R E
Sbjct: 101 VLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEV 160
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ FV + +LK + VH K+G ++FV +GL+D Y+ C + + VF
Sbjct: 161 NQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVF 220
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ + K+ V WT+M++ Y +NDC + +F++MR + N L S++ A L ++
Sbjct: 221 NGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVV 280
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +HG +K + H+ ALLDMY KCG+I+DAR F+ + D++ + MI Y
Sbjct: 281 LGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYA 340
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
QS ++A +LF + PN +++SVL A + L+ G+ +H+ I++G E D
Sbjct: 341 QSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLF 400
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NAL+D YAKC+ + + IF + + + ++WN+I+ G +
Sbjct: 401 VGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ 460
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ VT SV+ ACAS +++ +H S ++ +++ +G +L++ YAKCG + A
Sbjct: 461 MPCTQVTYSSVLRACASTASIRHAGQIHC-SIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF + E++ ++W+A+I GY + G +L LF M V+ N++ F +LS CS T
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V G F SM D PSM+HY C+V LL RAGRL +AL+F+ ++P P ++ A
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ LG +K+LE+ P YVL+SN+YA+ G +V +R+ M+ G+
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGV 699
Query: 666 SKSPGCSLVDL 676
K PG S V++
Sbjct: 700 RKVPGLSWVEI 710
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/601 (33%), Positives = 314/601 (52%), Gaps = 20/601 (3%)
Query: 96 VKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKA 155
++ A +F MP + S+ ++ Y K +++ + M++ + F S VLK
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 156 CCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSW 214
C + EG +H ++ G D F+ LVDMY+KC + + +VF + + +VV+W
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
++MI G Q QE LF+ MR NQ TL SLV+ + L G+ +HG I K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
G E ++ + L+ MY+K + D VF+ + + DLVSW A++ G+ S + ++
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAK 393
F F PN T SVL + + L + G+ VH+ I+ +D + ALVDMYAK
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAK 300
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
+ DA F+ +D+ +W IISG + + P+ TL S
Sbjct: 301 ARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASC 360
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+S C+ + ++ G LHA + K G +++VG+AL++ Y KCG + A +F + ++
Sbjct: 361 LSGCSHMATLENGRQLHAVAVKAGHFG-DIFVGSALVDLYGKCGCMEHAEAIFKGLISRD 419
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V+W+ +I GY G G +L F ML+E + P+E F +LSACS G+V EG K F
Sbjct: 420 IVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFD 479
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
SM + + PS++HY CMVD+L RAG+ E F+E M + P ++ L C L+
Sbjct: 480 SMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNV 539
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
D GE KK+ E+ P Y+L+SN++AS GRW V +R LM RG+ K PGCS V++
Sbjct: 540 DFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEV 599
Query: 677 D 677
D
Sbjct: 600 D 600
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 150/553 (27%), Positives = 251/553 (45%), Gaps = 63/553 (11%)
Query: 59 CKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C +TGSL K HAL + G D+ LV MY G V A VF + NPD ++
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MI ++ E + MR++ + F S ++ + D+ G +H I K
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG-YVQNDCAQEGLV 232
G D+ V L+ MY K R + +VF+ + ++VSW ++++G Y C + +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
+ + EGF + N T S++ +C+ L GK +H +I+K + + + TAL+DMY
Sbjct: 241 FYQMLLEGF-KPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA 299
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K + DA FD L + D+ SWT +I GY Q+ +KA+K F + PN T+AS
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
LS + + L GR +H++ ++ G D V +ALVD+Y KC + A IF+ +D
Sbjct: 360 CLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRD 419
Query: 412 VIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
+++WN+IISG L + + PD T + V+SAC+ +G V+ G
Sbjct: 420 IVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFD 479
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+K ++ ++ +++ + G ++ + M
Sbjct: 480 SMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEM---------------------- 517
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM-KHYVC 573
+ P +I+ T+L AC G V G K + F+ P M Y+
Sbjct: 518 ------------NLTPYSLIWETVLGACKLHGNVDFGEKAAKKL---FEMEPMMDSSYIL 562
Query: 574 MVDLLARAGRLEE 586
+ ++ A GR ++
Sbjct: 563 LSNIFASKGRWDD 575
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 221/675 (32%), Positives = 364/675 (53%), Gaps = 58/675 (8%)
Query: 59 CKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFG---HVKYARSVFDSMPN-PDFYS 113
CK+ LK FH L GL +D TKLV+ G + +A+ VF++ + +
Sbjct: 41 CKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFM 100
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ +IR Y + L K+ + + M D + F L C + RD G+++H I+
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
K+ D FV LV YA+C ++ +R+VFDE ++NVVSWTSMI GY + + A++ +
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220
Query: 233 LFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
LF RM R+ V N +T+ +++ACAKL L G+ ++ +I GIE+N +++AL+DMY
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMY 280
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
+KC I A+ +FDE + +L AM Y + G +AL + + P+ +++
Sbjct: 281 MKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISML 340
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSEK 410
S +S+ +QL N+ G+ H +R G E + + NAL+DMY KCH A IF+ S K
Sbjct: 341 SAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 400
Query: 411 DVIAWNSIISGLDDN--------------------------------------------- 425
V+ WNSI++G +N
Sbjct: 401 TVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQ 460
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
V+ D VT++S+ SAC LGA+ + ++ Y ++ + +V +GT L++ +++CGD
Sbjct: 461 SQECVNVDGVTMMSIASACGHLGALDLAKWIYYY-IEKNRIQLDVRLGTTLVDMFSRCGD 519
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+SA +F+++ ++ W+A IG M G+ ++ LF++M+ + ++P+ V+F L+A
Sbjct: 520 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTA 579
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C H G+V +G + F SM + P HY CMVDLL RAG LEEAL+ +++MP EP+
Sbjct: 580 CCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDV 639
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ + L C + ++ +K+ L P++ YVL+SN+YAS GRW + +VR MK
Sbjct: 640 IWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 699
Query: 662 QRGLSKSPGCSLVDL 676
++GL K PG S++ +
Sbjct: 700 EKGLRKPPGTSVIQI 714
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/523 (25%), Positives = 240/523 (45%), Gaps = 72/523 (13%)
Query: 53 LNLLGLCKSTGSLKAFHALLI-VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L++ + G+ H L+I +D + LV Y G + AR VFD M +
Sbjct: 140 LSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNV 199
Query: 112 YSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ MI Y + KD V+ F++ +R ++ V+ AC +L D++ G KV+
Sbjct: 200 VSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVY- 258
Query: 171 EIVKVGGPD--SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ ++ G + +++ LVDMY KC I ++++FDE N+ +M + YV+ +
Sbjct: 259 DFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTK 318
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E L + N M + + ++I++ S +++C++LR + GK HGY+L+ G E ++ AL+
Sbjct: 319 EALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 378
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK------KWAD 342
DMY+KC A +FD + + +V+W +++ GY ++G D A + F W
Sbjct: 379 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNT 438
Query: 343 FFP--------------------------NHVTIASVLSASAQLGNLNMGRMVH------ 370
+ VT+ S+ SA LG L++ + ++
Sbjct: 439 IISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKN 498
Query: 371 --SLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------- 421
L +RLG LVDM+++C A IF + + +DV AW + I
Sbjct: 499 RIQLDVRLG-------TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNV 551
Query: 422 ----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK-QGLLSSNVYVGT 470
++ + PD V + ++AC G VQ G + K G+ +V+ G
Sbjct: 552 ERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYG- 610
Query: 471 ALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
+++ + G + A +++ D E N V W++++ +QG+
Sbjct: 611 CMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGN 653
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 232/723 (32%), Positives = 368/723 (50%), Gaps = 103/723 (14%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGL---------------------TNDKCNTKLVSMYGS 92
+LL C+S +++ H +I GL + T +V+ Y +
Sbjct: 36 SLLKECRSVNTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPKSLGTGVVASYLA 95
Query: 93 FGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
G A SV + + P+P + + +++R + + M + + D+F
Sbjct: 96 CGATSDALSVLERVVPSPAVW-WNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPY 154
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK- 209
LKAC EL G H I G + FV LV MY++ + + VFDE K
Sbjct: 155 ALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKG 214
Query: 210 --NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE------GNQITLGSLVTACAKLRA 261
+V+SW S++A +V+ + L LF+ M E + I++ +++ ACA L+A
Sbjct: 215 IDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKA 274
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L Q K +H Y ++ G ++ + AL+D Y KCG+++DA +VF+ + D+VSW AM+ G
Sbjct: 275 LPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTG 334
Query: 322 YTQSGYPDKALKLFTDKK----------WA----------------DFF---------PN 346
YTQSG A +LF + + W+ D F PN
Sbjct: 335 YTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPN 394
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-------------EDYTVINALVDMYAK 393
VTI S+LSA A LG L+ G H+ ++ L ED V NAL+DMY+K
Sbjct: 395 SVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSK 454
Query: 394 CHVIADARYIFETTS--EKDVIAWNSIISGL----DDN---------------VSPDAVT 432
C AR IF + E++V+ W +I G D N V+P+A T
Sbjct: 455 CRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYT 514
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALLNFYAKCGDAQSARMVFDA 491
+ ++ ACA L ++++G +HAY T+ S+VY V L++ Y+KCGD +AR VFD+
Sbjct: 515 ISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDS 574
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
M ++N V+W++M+ GYGM G G +L +F M P+++ F +L ACSH+GMV +G
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCG 611
F M D+ + S +HY C++DLLAR+GRL++A + ++ MP+EP +++ A L C
Sbjct: 635 LDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACR 694
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 671
++S +L E + K++ + + Y L+SN+YA+ RW V ++R+LMK+ G+ K PGC
Sbjct: 695 VHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGC 754
Query: 672 SLV 674
S V
Sbjct: 755 SWV 757
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 210/620 (33%), Positives = 332/620 (53%), Gaps = 30/620 (4%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MYG G V A +VF ++ +P+ S+ +++ + N Y++ + +Y+ M D +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F + C +D+ +G +H I++ D + T L+ MYA+CRD+ +R+ FDE
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG---NQITLGSLVTACAKLRALH 263
K +V+W ++IAGY +N + L ++ M EG + IT S + AC+ + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QG+ + + G +S + AL++MY KCG++ AR VFD L + D+++W MI GY
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
+ G +AL+LF D PN VT +L+A L +L GR +H G E D
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLV 300
Query: 383 VINALVDMYAKCHV-IADARYIFETTSEKDVIAWNSII----------SGLD-------D 424
+ N L++MY KC + +AR +FE +DVI WN +I LD +
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
NV+P+ +TL +V+SACA LGA + G ++HA G ++V + +L+N Y +CG
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHAL-IASGRCKADVVLENSLMNMYNRCGSLDD 419
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
VF A+R+K+ V+WS +I Y G L F ++L E + ++V + LSACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
GM+ EG + F SM D P +H++CMVDLL+RAGRLE A + +MP PD +
Sbjct: 480 GGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELH-PDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
+ L GC L++ + K+ EL D+ L+SN+YA GRW + VR+ +R
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW---DDVRKTRNRR 596
Query: 664 GLSKSPGCSLVDL-DIANDF 682
K+PGCS +++ D ++F
Sbjct: 597 AARKNPGCSYIEINDTVHEF 616
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 149/516 (28%), Positives = 259/516 (50%), Gaps = 34/516 (6%)
Query: 56 LGLCKSTGSLKA---FHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+G+C S+ LK HA+++ L T L++MY ++ AR FD M
Sbjct: 65 IGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKT 124
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE---HDNFVFSKVLKACCELRDIDEGMK 167
++ +I Y N ++ ++ Y+ M + E D FS L AC + DI +G +
Sbjct: 125 LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGRE 184
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+ V G DS V L++MY+KC + S+R+VFD +++V++W +MI+GY +
Sbjct: 185 IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA 244
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
A + L LF RM + N +T L+TAC L L QG+ +H + + G E + +
Sbjct: 245 ATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNV 304
Query: 287 LLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
LL+MY KC ++ +AR VF+ L + D+++W +IV Y Q G AL +F + + P
Sbjct: 305 LLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAP 364
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYI 403
N +T+++VLSA A LG G+ VH+L I G D + N+L++MY +C + D +
Sbjct: 365 NEITLSNVLSACAVLGAKRQGKAVHAL-IASGRCKADVVLENSLMNMYNRCGSLDDTVGV 423
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
F +K +++W+++I+ L + ++ D VT+VS +SAC+ G +
Sbjct: 424 FAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGML 483
Query: 447 QVG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR-MVFDAMREKNTVTWSAMI 504
+ G S + GL + +++ ++ G ++A ++ D + V W++++
Sbjct: 484 KEGVQSFLSMVGDHGLAPDYRHF-LCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLL 542
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
G + D + A +D L E +E T+LS
Sbjct: 543 SGCKLHNDTKRA-ARVADKLFELESEDEHSTVTLLS 577
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 199/614 (32%), Positives = 332/614 (54%), Gaps = 20/614 (3%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
C L++MY G A VFD +P + SF +++ + L +++ ++ +R
Sbjct: 467 CANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEG 526
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
E + FV + VLK + + VH K+G ++FV + L+D Y+ C + +R
Sbjct: 527 HEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDAR 586
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VFD + K+ V+WT+M++ Y +NDC + L +F++MR + N L S++ A L
Sbjct: 587 RVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLS 646
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
++ GK +H +K + H+ ALLDMY KCGNI DAR F+ + + D++ W+ MI
Sbjct: 647 SVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMIS 706
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
Y Q ++A +LF + PN +++SVL A A + L++G+ +H+ I++G E
Sbjct: 707 RYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHES 766
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
+ V NAL+D+YAKC + + IF + + + ++WN+II G +
Sbjct: 767 ELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMR 826
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V VT SV+ ACAS ++ +H ++ +S+ V +L++ YAKCG
Sbjct: 827 AASVPSTQVTYSSVLRACASTASINHVGQVHCL-IEKSTFNSDTIVSNSLIDSYAKCGCI 885
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ AR +F+ ++E + V+W+A+I GY + G + LF M ++ N++ F +LS C
Sbjct: 886 RDAREIFETLKECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVC 945
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
TG+V +G F SM D PSM+HY C+V LL RAGRL +AL F+ ++P P +
Sbjct: 946 GSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMV 1005
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ A L C ++ +LG +K+LE+ P YVL+SN+Y++ G +V R+ M+
Sbjct: 1006 WRALLSSCIVHKNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRN 1065
Query: 663 RGLSKSPGCSLVDL 676
G+ K PG S V++
Sbjct: 1066 IGVRKEPGLSWVEI 1079
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 262/503 (52%), Gaps = 24/503 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQ 201
D++ ++++L+ C D G VH +V+ GG D F L++MY K GS+ +
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFD ++N+VS+ +++ G+ +E LF R+R E NQ L +++ +
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +H K+G + N+ + +AL+D Y CG + DAR VFD + D V+WTAM+
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LGLED 380
Y+++ P+ L++F+ + A N + SVL A+ L ++ +G+ +H+ ++ L +
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTE 666
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
V AL+DMYAKC I DAR FE + DVI W+ +IS +
Sbjct: 667 RHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMR 726
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+VSP+ +L SV+ ACA++ + +G +H ++ K G S ++VG AL++ YAKC D +
Sbjct: 727 SSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIG-HESELFVGNALIDLYAKCSDME 785
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
S+ +F ++R+ N V+W+ +I GY G G +L++F +M V +V ++++L AC+
Sbjct: 786 SSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACA 845
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
T + + + + F ++D A+ G + +A E E + E D+ +
Sbjct: 846 STASINHVGQ-VHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLK-ECDLVSW 903
Query: 604 GAFLHGCGLYSRFDLGEVMIKKM 626
A + G ++ + + + + M
Sbjct: 904 NAIISGYAVHGQAAMAQELFDMM 926
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 182/531 (34%), Positives = 315/531 (59%), Gaps = 23/531 (4%)
Query: 167 KVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H ++ +G S F++T L+ + DI +RQVFD+ + W ++I GY +N+
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
Q+ L++++ M+ V + T L+ AC+ L L G+++H + ++G + + +
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 286 ALLDMYVKCGNIRDARSVFD--ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
L+ +Y KC + AR+VF+ L +VSWTA++ Y Q+G P +AL++F+ + D
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDV 218
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P+ V + SVL+A L +L GR +H+ +++GLE + ++ +L MYAKC +A A+
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 403 IFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
+F+ ++I WN++ISG ++ +V PD +++ S ISACA +G+
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
++ S++ Y + +V++ +AL++ +AKCG + AR+VFD +++ V WSAMI
Sbjct: 339 LEQARSMYEYVGRSDY-RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GYG+ G +++L+ M V PN+V F +L AC+H+GMV EGW F+++ D K
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGW-WFFNLMADHKIN 456
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P +HY C++DLL RAG L++A E ++ MP++P V+++GA L C + +LGE ++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ + P +YV +SNLYA+ W RV +VR MK++GL+K GCS V++
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Score = 251 bits (642), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 233/418 (55%), Gaps = 22/418 (5%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
+L+ LK HA L+V GL + TKL+ SFG + +AR VFD +P P +
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+ +IR Y N+ ++D + Y M+ D+F F +LKAC L + G VH ++
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQE 229
++G D FV GL+ +YAKCR +GS+R VF+ ++ +VSWT++++ Y QN E
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L +F+ MR+ V+ + + L S++ A L+ L QG+ +H ++K+G+EI L+ +L
Sbjct: 206 ALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG + A+ +FD++ S +L+ W AMI GY ++GY +A+ +F + D P+ ++
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 350 IASVLSASAQLGNLNMGR-MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS 408
I S +SA AQ+G+L R M +G +D + +AL+DM+AKC + AR +F+ T
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 409 EKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
++DV+ W+++I G V P+ VT + ++ AC G V+ G
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial; Flags: Precursor
gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 787
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 344/629 (54%), Gaps = 23/629 (3%)
Query: 69 HALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H +I G+ +D T L+ MYG G++ A VFD MP D ++ ++ N
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV-KVGGPDSFVLTGL 186
+ +KCM E D V++ C EL + VH +I K+ D + L
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ MY+KC D+ SS ++F++ KN VSWT+MI+ Y + + +++ L F+ M + +E N
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN-SHLVTALLDMYVKCGNIRDARSVFD 305
+TL S++++C + + +GK +HG+ ++ ++ N L AL+++Y +CG + D +V
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ ++V+W ++I Y G +AL LF P+ T+AS +SA G + +
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
G+ +H IR + D V N+L+DMY+K + A +F + V+ WNS++ G N
Sbjct: 424 GKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ + VT ++VI AC+S+G+++ G +H GL +++
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL--KDLFT 541
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
TAL++ YAKCGD +A VF AM ++ V+WS+MI YGM G G +++ F+ M+
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PNEV+F +LSAC H+G V EG K ++++ + F P+ +H+ C +DLL+R+G L+EA
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAY 660
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
++ MP D S++G+ ++GC ++ + D+ + + + ++ D YY L+SN+YA +G
Sbjct: 661 RTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEG 720
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
W ++R MK L K PG S +++D
Sbjct: 721 EWEEFRRLRSAMKSSNLKKVPGYSAIEID 749
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 170/556 (30%), Positives = 297/556 (53%), Gaps = 35/556 (6%)
Query: 59 CKSTGSLKAFHALLIVDG-LTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQV 116
C S + HA L+V G L D TKL+ Y G +R VF++ P PD + + V
Sbjct: 11 CSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGV 70
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD-IDEGMKVHCEIVKV 175
+I+ L ++ Y + + FVF VL+AC R+ + G KVH I+K
Sbjct: 71 LIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKG 130
Query: 176 GGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
G D V+ T L+ MY + ++ + +VFD +++V+W+++++ ++N + L +F
Sbjct: 131 GVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMF 190
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
M + VE + +T+ S+V CA+L L + +HG I + +++ L +LL MY KC
Sbjct: 191 KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKC 250
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G++ + +F+++ + VSWTAMI Y + + +KAL+ F++ + PN VT+ SVL
Sbjct: 251 GDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVL 310
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN-ALVDMYAKCHVIADARYIFETTSEKDV 412
S+ +G + G+ VH +R L+ +Y ++ ALV++YA+C ++D + S++++
Sbjct: 311 SSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
Query: 413 IAWNSIIS------------GL-----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+AWNS+IS GL + PDA TL S ISAC + G V +G +H +
Sbjct: 371 VAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGH 430
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
+ + S+ +V +L++ Y+K G SA VF+ ++ ++ VTW++M+ G+ G+
Sbjct: 431 VIRTDV--SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG-W---KCFYSMCRDFKFVPSMKHY 571
+++LF M + ++ NEV F ++ ACS G + +G W K S +D F +
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL-FTDT---- 543
Query: 572 VCMVDLLARAGRLEEA 587
++D+ A+ G L A
Sbjct: 544 -ALIDMYAKCGDLNAA 558
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 59 CKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
C++ G + K H +I ++++ L+ MY G V A +VF+ + + ++
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 474
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
M+ + N + + + M E + F V++AC + +++G VH +++
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 534
Query: 176 GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
G D F T L+DMYAKC D+ ++ VF +++VSW+SMI Y + + FN
Sbjct: 535 GLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFN 594
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
+M E + N++ ++++AC ++ +GK+ + G+ NS +D+ + G
Sbjct: 595 QMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSG 654
Query: 296 NIRDARSVFDELCSI-DLVSWTAMIVG 321
++++A E+ + D W +++ G
Sbjct: 655 DLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 39.3 bits (90), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
+C+SL V S LHA+ G L + T L+ YA G S+R+VF+A ++
Sbjct: 10 SCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ +I ++ L+ +++E Q ++ +F ++L AC+
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA 111
>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
Length = 667
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 214/617 (34%), Positives = 326/617 (52%), Gaps = 38/617 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSF-QVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L +Y + G A ++ MP P SF ++R Y +++ + Y MR
Sbjct: 51 LFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRA----F 106
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+ F KAC LR G VHC + G G D++V L+ MY C D+G++ VF
Sbjct: 107 DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVF 166
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
++ VVSW ++IAG V+N A+ L +F M V ++ T+ S++ ACA+ + L+
Sbjct: 167 GAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLN 226
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS--IDLVSWTAMIVG 321
G+ +H + G+ + AL+DMY KC ++ DAR VFD C D+VSWTAMI
Sbjct: 227 TGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDH-CKHDKDVVSWTAMIGA 285
Query: 322 YTQSGYPDKALKL-----FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
Y + +A+ L + W PN VT+ +LSA A + + + H+L IRL
Sbjct: 286 YVLNDRAFEAISLGCQMLMSGAAW----PNGVTMVYLLSACASMPSGKHAKCTHALCIRL 341
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------- 421
GL+ D V AL+D YA+C + R E S + WN+ +SG
Sbjct: 342 GLKSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELF 400
Query: 422 ---LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ ++V PD+ T+ S++ A A ++ G ++H + G L S + T L++ Y+K
Sbjct: 401 KRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRST-EIATGLIDVYSK 459
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
GD +A +F + EK+ V W+ +I GYG+ G ++ L+ M+ +PN V T+
Sbjct: 460 AGDLDAAWALFQWLPEKDVVAWTTIIAGYGIHGHARTAILLYDRMVESGGKPNTVTIATL 519
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L ACSH GM+ EG K F M +P+ +HY C+VD+L RAGR+EEA +++MP EP
Sbjct: 520 LYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEP 579
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
S++GA L C L+ + GEV K++ +L P+ YVL+ N+YA+ RW V VR
Sbjct: 580 STSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRR 639
Query: 659 LMKQRGLSKSPGCSLVD 675
+M +RGL K PG SLV+
Sbjct: 640 MMVERGLLKEPGSSLVE 656
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 168/376 (44%), Gaps = 31/376 (8%)
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT-AMIVGYTQSGYPDKALKLFTDKKW 340
H + L +Y CG A ++ ++ VS++ +++ YT G +AL +++ +
Sbjct: 46 HGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRA 105
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIAD 399
D H+T A A L GR VH + G D V NAL+ MY C +
Sbjct: 106 FD----HLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGA 161
Query: 400 ARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACAS 442
A +F + V++WN++I+G D V D T+VSV+ ACA
Sbjct: 162 AEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQ 221
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWS 501
+ G ++H +G L V V AL++ Y KC + AR VFD + +K+ V+W+
Sbjct: 222 AKDLNTGRAVHRLVEDKG-LGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWT 280
Query: 502 AMIGGYGMQGDGGGSLALFSDML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
AMIG Y + +++L ML + PN V +LSAC+ + G+ KC +++C
Sbjct: 281 AMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACA-SMPSGKHAKCTHALCI 339
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ ++D AR G+++ +E + + A L G + R
Sbjct: 340 RLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAET--WNAALSGYTVSGREKKAI 397
Query: 621 VMIKKML--ELHPDKA 634
+ K+M+ + PD A
Sbjct: 398 ELFKRMIAESVRPDSA 413
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 206/619 (33%), Positives = 327/619 (52%), Gaps = 94/619 (15%)
Query: 149 FSKVLKACCELRDIDEGMK-VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+K+L +C +L+ ++ VH ++K G + F+ L+D YAKC + RQ+FD+
Sbjct: 22 FAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKM 81
Query: 207 LDKNVVSWTS-------------------------------MIAGYVQNDCAQEGLVLFN 235
+NV +W S M++G+ Q+D +E L F
Sbjct: 82 PQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFA 141
Query: 236 RM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
M +EGFV N+ T S ++AC+ L +++G +H I K + ++ +AL+DMY KC
Sbjct: 142 MMHKEGFVL-NEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKC 200
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIAS 352
GN+ DA+ VFDE+ ++VSW ++I Y Q+G +ALK+F + W + P+ VT+AS
Sbjct: 201 GNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVE--PDEVTLAS 258
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETT--- 407
V+SA A L + +G+ VH+ +++ D + NA VDMYAKC I +AR+IF++
Sbjct: 259 VISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIR 318
Query: 408 ----------------------------SEKDVIAWNSIISGLDDN-------------- 425
+E++V++WN++I+G N
Sbjct: 319 NVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLK 378
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL-----SSNVYVGTALLNFYA 477
V P T +++ ACA L + +G H + K G +++VG +L++ Y
Sbjct: 379 RESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYV 438
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG + +VF M E++ V+W+AMI G+ G G +L LF +ML+ +P+ +
Sbjct: 439 KCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIG 498
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+LSAC H G V EG F SM RDF P HY CMVDLL RAG LEEA +E MP++
Sbjct: 499 VLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQ 558
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
PD ++G+ L C ++ LG+ + +K+ E+ + YVL+SN+YA G+W VR
Sbjct: 559 PDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVR 618
Query: 658 ELMKQRGLSKSPGCSLVDL 676
+LM++ G++K PGCS + +
Sbjct: 619 KLMRKEGVTKQPGCSWIKI 637
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/481 (29%), Positives = 243/481 (50%), Gaps = 62/481 (12%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V+ G + A S+F SMP D ++ M+ + +D ++ + ++ M K +
Sbjct: 92 VVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLN 151
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQV 202
+ F+ L AC L D++ G+++H I K P D ++ + LVDMY+KC ++ ++QV
Sbjct: 152 EYTFASGLSACSGLNDMNRGVQIHSLIAK--SPCLSDVYIGSALVDMYSKCGNVNDAQQV 209
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FDE D+NVVSW S+I Y QN A E L +F M E +VE +++TL S+++ACA L A+
Sbjct: 210 FDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAI 269
Query: 263 HQGKWLHGYILKIGIEINSHLVT-ALLDMYVKCGNIRDARSVFD---------------- 305
G+ +H ++K+ N +++ A +DMY KC I++AR +FD
Sbjct: 270 KVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSG 329
Query: 306 ---------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
++ ++VSW A+I GYTQ+G ++AL LF K P H T
Sbjct: 330 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTF 389
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGL-------EDYTVINALVDMYAKCHVIADARYI 403
A++L A A L +L++G H ++ G +D V N+L+DMY KC + + +
Sbjct: 390 ANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 449
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
F E+D ++WN++I G LD PD +T++ V+SAC G V
Sbjct: 450 FRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFV 509
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIG 505
+ G + T+ ++ T +++ + G + A+ + + M + ++V W +++
Sbjct: 510 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLA 569
Query: 506 G 506
Sbjct: 570 A 570
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 9/254 (3%)
Query: 77 LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC 136
+ N T +VS Y K AR +F M + S+ +I Y N ++ + +
Sbjct: 317 IRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-------GPDSFVLTGLVDM 189
+++ ++ F+ +LKAC +L D+ GM+ H ++K G D FV L+DM
Sbjct: 377 LKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y KC + VF + ++++ VSW +MI G+ QN E L LF M + + + IT+
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITM 496
Query: 250 GSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL- 307
+++AC + +G+ + G+ T ++D+ + G + +A+S+ +E+
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMP 556
Query: 308 CSIDLVSWTAMIVG 321
D V W +++
Sbjct: 557 VQPDSVIWGSLLAA 570
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 36/199 (18%)
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
SP A L S I L A+ V +HA K G S+ V++ L++ YAKCG + R
Sbjct: 20 SPFAKLLDSCIKL--KLSAIDV-RCVHASVIKSGF-SNEVFIQNRLIDAYAKCGSLEDGR 75
Query: 487 MVFDAMREKNTV-------------------------------TWSAMIGGYGMQGDGGG 515
+FD M ++N TW++M+ G+
Sbjct: 76 QLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEE 135
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
+L F+ M E NE F + LSACS + G + +S+ + + +V
Sbjct: 136 ALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQ-IHSLIAKSPCLSDVYIGSALV 194
Query: 576 DLLARAGRLEEALEFMENM 594
D+ ++ G + +A + + M
Sbjct: 195 DMYSKCGNVNDAQQVFDEM 213
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 202/595 (33%), Positives = 346/595 (58%), Gaps = 30/595 (5%)
Query: 110 DFYSFQVMIRWYFLND-LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D S+ +I Y N+ ++ I F+ + ++ + F+ V +AC +I G +
Sbjct: 6 DLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNE-YCFTGVFRACSNKENISLGKII 64
Query: 169 HCEIVKVGGPDSFVLTG--LVDMYAKCR-DIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++K G +S V G L+DM+ K D+ S+ +VFD D+NVV+WT MI + Q
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 226 CAQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+++ + LF + + G+V ++ TL +V+ACA++ L G+ H ++K G++++ +
Sbjct: 125 FSRDAVDLFLDMVLSGYVP-DRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 285 TALLDMYVKC---GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK-ALKLFTDKKW 340
+L+DMY KC G++ DAR VFD + +++SWTA+I GY QSG D+ A++LF +
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIAD 399
PNH T +SVL A A L ++ +G V++L +++ L + N+L+ MY++C + +
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNVSPD-----------------AVTLVSVISACAS 442
AR F+ EK+++++N+I++ +++ + A T S++S +S
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
+GA+ G +H+ K G SN+++ AL++ Y++CG+ ++A VF+ M + N ++W++
Sbjct: 364 IGAIGKGEQIHSRILKSGF-KSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTS 422
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI G+ G +L F ML V PNEV + +LSACSH G++ EG K F SM +
Sbjct: 423 MITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEH 482
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
VP M+HY C+VDLL R+G LEEA+E + +MP + D + FL C ++ DLG+
Sbjct: 483 GIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHA 542
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ +LE P Y+L+SNL+AS G+W V ++R+ MK+R L+K GCS ++++
Sbjct: 543 AEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVE 597
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/379 (32%), Positives = 206/379 (54%), Gaps = 23/379 (6%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G ++ A VFD MP+ + ++ +MI + +D V+ + M D F S V+
Sbjct: 93 GDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVV 152
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS---SRQVFDETLDK 209
AC E+ + G + HC ++K G D V LVDMYAKC GS +R+VFD
Sbjct: 153 SACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVH 212
Query: 210 NVVSWTSMIAGYVQN-DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
NV+SWT++I GYVQ+ C +E + LF M +G V+ N T S++ ACA L + G+ +
Sbjct: 213 NVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQV 272
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
+ ++K+ + + + +L+ MY +CGN+ +AR FD L +LVS+ ++ Y +S
Sbjct: 273 YALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNS 332
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINAL 387
++A +LF + + A N T AS+LS ++ +G + G +HS ++ G + + + NAL
Sbjct: 333 EEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNAL 392
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDA 430
+ MY++C I A +F + +VI+W S+I+G L+ VSP+
Sbjct: 393 ISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNE 452
Query: 431 VTLVSVISACASLGAVQVG 449
VT ++V+SAC+ +G + G
Sbjct: 453 VTYIAVLSACSHVGLISEG 471
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 235/459 (51%), Gaps = 29/459 (6%)
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+++VSW+++I+ Y N+ A E + F M E N+ + AC+ + GK +
Sbjct: 5 RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64
Query: 269 HGYILKIG-IEINSHLVTALLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
G++LK G E + + AL+DM+VK G++ A VFD + ++V+WT MI + Q G
Sbjct: 65 FGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLG 124
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
+ A+ LF D + + P+ T++ V+SA A++G L++GR H L ++ GL+ D V
Sbjct: 125 FSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGC 184
Query: 386 ALVDMYAKCHV---IADARYIFETTSEKDVIAWNSIISG------------------LDD 424
+LVDMYAKC + DAR +F+ +V++W +II+G +
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V P+ T SV+ ACA+L + +G ++A K L S N VG +L++ Y++CG+ ++
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINC-VGNSLISMYSRCGNMEN 303
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR FD + EKN V+++ ++ Y + + LF+++ N F ++LS S
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G +G+G + +S F ++ ++ + +R G +E A + M + +V +
Sbjct: 364 IGAIGKGEQ-IHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWT 421
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ + G + KMLE + P++ Y ++S
Sbjct: 422 SMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLS 460
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 221/456 (48%), Gaps = 36/456 (7%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYG---SFGHVKYARSVFDSMP 107
++ C G L + FH L++ GL D C LV MY + G V AR VFD MP
Sbjct: 151 VVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMP 210
Query: 108 NPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
+ S+ +I Y + ++ +E + M + + ++F FS VLKAC L DI G
Sbjct: 211 VHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGE 270
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+V+ +VK+ + V L+ MY++C ++ ++R+ FD +KN+VS+ +++ Y ++
Sbjct: 271 QVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSL 330
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
++E LFN + N T SL++ + + A+ +G+ +H ILK G + N H+
Sbjct: 331 NSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICN 390
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+ MY +CGNI A VF+E+ +++SWT+MI G+ + G+ +AL+ F A P
Sbjct: 391 ALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSP 450
Query: 346 NHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA 400
N VT +VLSA + +G ++ G M GI +E Y + VD+ + + +A
Sbjct: 451 NEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACV---VDLLGRSGHLEEA 507
Query: 401 RYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+ + K DA+ L + + AC G + +G +Q
Sbjct: 508 MELVNSMPFK-----------------ADALVLRTFLGACRVHGNMDLGKHAAEMILEQD 550
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
Y+ L N +A G + + M+E+N
Sbjct: 551 PHDPAAYI--LLSNLHASAGQWEEVAEIRKKMKERN 584
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+++ V+WSA+I Y +++ F DML PNE FT + ACS+ + G
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARA-GRLEEALEFMENMP 595
F + + F + ++D+ + G LE A + + MP
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMP 106
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 198/552 (35%), Positives = 320/552 (57%), Gaps = 25/552 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVF 203
D+F FS +L R +++ +H ++V G +S F++T V+ +IG +R+VF
Sbjct: 71 DSF-FSSLLDHSVHKRHLNQ---IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVF 126
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
DE + +V W ++I GY ++ + + +++RM+ V + TL ++ AC+ + L
Sbjct: 127 DEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLE 186
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +HG I ++G E + + L+ +Y KCG + AR VF+ L ++VSWT+MI GY
Sbjct: 187 VGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYG 246
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q+G P +AL++F + + P+ + + SVL A + +L G+ +H +++GLE +
Sbjct: 247 QNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPD 306
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
++ +L MYAKC + AR F+ +V+ WN++ISG + N
Sbjct: 307 LLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKN 366
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ D++T+ S I ACA +G++ + + Y K ++V+V TAL++ +AKCG A
Sbjct: 367 IRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEY-RNDVFVNTALIDMFAKCGSVDLA 425
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R VFD +K+ V WSAMI GYG+ G G ++ LF M V PN+V F +L+AC+H+
Sbjct: 426 REVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHS 485
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EGW+ F+SM + + +HY C+VDLL R+G L EA +F+ MPIEP VS++GA
Sbjct: 486 GLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGA 544
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C +Y LGE +++ L P +YV +SNLYAS W V +VR LM+++GL
Sbjct: 545 LLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGL 604
Query: 666 SKSPGCSLVDLD 677
SK G SL++++
Sbjct: 605 SKDLGYSLIEIN 616
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/466 (33%), Positives = 242/466 (51%), Gaps = 28/466 (6%)
Query: 65 LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
L HA L+V GL TK V+ + G + YAR VFD P P + + +IR Y
Sbjct: 87 LNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSS 146
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
++ + D +E Y M+ D F VLKAC + ++ G +VH +I ++G D FV
Sbjct: 147 HNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFV 206
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
GLV +YAKC + +R VF+ D+N+VSWTSMI+GY QN E L +F +MR+ V
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNV 266
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + I L S++ A + L QGK +HG ++K+G+E L+ +L MY KCG + ARS
Sbjct: 267 KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARS 326
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
FD++ +++ W AMI GY ++GY ++A+ LF + + + +T+ S + A AQ+G+
Sbjct: 327 FFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGS 386
Query: 363 LN----MGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L+ MG ++ R D V AL+DM+AKC + AR +F+ T +KDV+ W+++
Sbjct: 387 LDLAKWMGDYINKTEYR---NDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAM 443
Query: 419 ISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I G V P+ VT V +++AC G V+ G L G+
Sbjct: 444 IVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGI 503
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ + + +++ + G A M E W A++G
Sbjct: 504 EARHQHYA-CVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGA 548
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 210/620 (33%), Positives = 332/620 (53%), Gaps = 30/620 (4%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MYG G V A +VF ++ +P+ S+ +++ + N Y++ + +Y+ M D +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 149 FSKVLKACCELRDIDEGMKVHCEIV--KVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F + C +D+ +G +H I+ ++ D + T L+ MYA+CRD+ +R+ FDE
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG---NQITLGSLVTACAKLRALH 263
K +V+W ++IAGY +N + L ++ M EG + IT S + AC + +
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QG+ + + G +S + AL++MY KCG++ AR VFD L + D+++W MI GY
Sbjct: 181 QGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYA 240
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
+ G +AL+LF D PN VT +L+A L +L GR +H G E D
Sbjct: 241 KQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLV 300
Query: 383 VINALVDMYAKCHV-IADARYIFETTSEKDVIAWNSII----------SGLD-------D 424
+ N L++MY KC + +AR +FE +DVI WN +I LD +
Sbjct: 301 IGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLE 360
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
NV+P+ +TL +V+SACA LGA + G ++HA G ++V + +L+N Y +CG
Sbjct: 361 NVAPNEITLSNVLSACAVLGAKRQGKAVHAL-IASGRCKADVVLENSLMNMYNRCGSLDD 419
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
VF A+R+K+ V+WS +I Y G L F ++L E + ++V + LSACSH
Sbjct: 420 TVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSH 479
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
GM+ EG + F SM D P +H++CMVDLL+RAGRLE A + +MP PD +
Sbjct: 480 GGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWT 539
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELH-PDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
+ L GC L++ + K+ EL D+ L+SN+YA GRW + VR+ +R
Sbjct: 540 SLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRW---DDVRKTRNRR 596
Query: 664 GLSKSPGCSLVDL-DIANDF 682
K+PGCS +++ D ++F
Sbjct: 597 AARKNPGCSYIEINDTVHEF 616
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 146/515 (28%), Positives = 257/515 (49%), Gaps = 32/515 (6%)
Query: 56 LGLCKSTGSLKA---FHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+G+C S+ LK HA+++ L T L++MY ++ AR FD M
Sbjct: 65 IGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKT 124
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE---HDNFVFSKVLKACCELRDIDEGMK 167
++ +I Y N ++ ++ Y+ M + E D FS L AC + DI +G +
Sbjct: 125 LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGRE 184
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+ V G DS V L++MY+KC + S+R+VFD +++V++W +MI+GY +
Sbjct: 185 IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA 244
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
A + L LF RM + N +T L+TAC L L QG+ +H + + G E + +
Sbjct: 245 ATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNV 304
Query: 287 LLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
LL+MY KC ++ +AR VF+ + + D+++W +IV Y Q G AL +F + + P
Sbjct: 305 LLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAP 364
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYI 403
N +T+++VLSA A LG G+ VH+L I G D + N+L++MY +C + D +
Sbjct: 365 NEITLSNVLSACAVLGAKRQGKAVHAL-IASGRCKADVVLENSLMNMYNRCGSLDDTVGV 423
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
F +K +++W+++I+ L + ++ D VT+VS +SAC+ G +
Sbjct: 424 FAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGML 483
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR-MVFDAMREKNTVTWSAMIG 505
+ G L+ + +++ ++ G ++A ++ D + V W++++
Sbjct: 484 KEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLS 543
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
G + D + A +D L E +E T+LS
Sbjct: 544 GCKLHNDTKRA-ARVADKLFELESEDEHSTVTLLS 577
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 344/632 (54%), Gaps = 23/632 (3%)
Query: 66 KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H +I G+ +D T L+ MYG G++ A VFD MP D ++ ++ N
Sbjct: 679 RKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 738
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV-KVGGPDSFVL 183
+ +KCM E D V++ C EL + VH +I K+ D +
Sbjct: 739 CEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLC 798
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+ MY+KC D+ SS ++F++ KN VSWT+MI+ Y + + +++ L F+ M + +E
Sbjct: 799 NSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIE 858
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN-SHLVTALLDMYVKCGNIRDARS 302
N +TL S++++C + +GK +HG+ ++ ++ N L AL+++Y +CG + D +
Sbjct: 859 PNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCET 918
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+ + ++V W + I Y G +AL LF P+ T+AS++SA G
Sbjct: 919 ILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGL 978
Query: 363 LNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+ +G+ +H IR + D V N+++DMY+K + A +F+ + ++ WNS++ G
Sbjct: 979 VRLGKQIHGHVIRTDVSDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGF 1038
Query: 423 DDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
N + + VT ++VI AC+S+G+++ G +H G+ +
Sbjct: 1039 SQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLIVCGI--KD 1096
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
++ TAL++ YAKCGD +A VF AM ++ V+WS+MI YGM G G +++ F+ M+
Sbjct: 1097 LFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSAISTFNQMVE 1156
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
+PNEV+F +LSAC H+G V EG K ++++ + F P+ +H+ C +DLL+R+G L+
Sbjct: 1157 SGTKPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKLFGVSPNSEHFACFIDLLSRSGDLK 1215
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
EA ++ MP D S++G+ ++GC ++ + D+ + + + ++ D YY L+SN+YA
Sbjct: 1216 EAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDISDIVTDDTGYYTLLSNIYA 1275
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+G W ++R MK L K PG S +++D
Sbjct: 1276 EEGEWEEFRRMRSAMKSLNLKKVPGYSAIEID 1307
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 169/602 (28%), Positives = 305/602 (50%), Gaps = 34/602 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDG-LTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPD 110
+ L C S + HA L+V G L D TKL+ Y G +R VF++ P PD
Sbjct: 563 MPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPD 622
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD-IDEGMKVH 169
+ + V+I+ L ++ Y + + FVF VL+AC R+ + G KVH
Sbjct: 623 SFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRACAGSREHLSVGRKVH 682
Query: 170 CEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
I+K G D V+ T L+ MY + ++ + +VFD +++V+W+++++ ++N
Sbjct: 683 GRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVL 742
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L +F M + VE + +T+ S+V CA+L L + +HG I + + + L +LL
Sbjct: 743 KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDFDETLCNSLL 802
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
MY KCG++ + +F+++ + VSWTAMI Y + + +KAL+ F++ + PN V
Sbjct: 803 TMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLV 862
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN-ALVDMYAKCHVIADARYIFET 406
T+ S+LS+ G + G+ VH IR L+ +Y ++ ALV++YA+C + D I
Sbjct: 863 TLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHV 922
Query: 407 TSEKDVIAWNSIIS-----------------GLDDNVSPDAVTLVSVISACASLGAVQVG 449
+++++ WNS IS + + PD+ TL S+ISAC + G V++G
Sbjct: 923 VGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLG 982
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H + + + S+ +V ++++ Y+K G A VFD ++ ++ VTW++M+ G+
Sbjct: 983 KQIHGHVIRTDV--SDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQ 1040
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G+ ++ LF M + ++ N+V F ++ ACS G + +G + + V +K
Sbjct: 1041 NGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHHKL-----IVCGIK 1095
Query: 570 HY---VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++D+ A+ G L A M VS + + ++ G++ R +M
Sbjct: 1096 DLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVS-WSSMINAYGMHGRIGSAISTFNQM 1154
Query: 627 LE 628
+E
Sbjct: 1155 VE 1156
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 135/272 (49%), Gaps = 4/272 (1%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+++ C++TG + K H +I ++++ ++ MY G V A +VFD + +
Sbjct: 968 SIISACENTGLVRLGKQIHGHVIRTDVSDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRS 1027
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
++ M+ + N + + + M E + F V++AC + +++G VH
Sbjct: 1028 IVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSLEKGRWVHH 1087
Query: 171 EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
+++ G D F T L+DMYAKC D+ ++ VF ++++VSW+SMI Y +
Sbjct: 1088 KLIVCGIKDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAYGMHGRIGSA 1147
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+ FN+M E + N++ ++++AC ++ +GK+ + G+ NS +D+
Sbjct: 1148 ISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKLFGVSPNSEHFACFIDL 1207
Query: 291 YVKCGNIRDARSVFDELCSI-DLVSWTAMIVG 321
+ G++++A E+ + D W +++ G
Sbjct: 1208 LSRSGDLKEAYRTIKEMPFLADASVWGSLVNG 1239
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 313/531 (58%), Gaps = 23/531 (4%)
Query: 167 KVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H ++ +G S F++T L+ + DI +RQVFD+ + W ++I GY +N+
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
Q+ L++++ M+ V + T L+ AC+ L L G+++H + ++G + + +
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 286 ALLDMYVKCGNIRDARSVFD--ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
L+ +Y KC + AR+VF+ L +VSWTA++ Y Q+G P +AL++F+ + D
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P+ V + SVL+A L +L GR +H+ +++GLE + ++ +L MYAKC +A A+
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 403 IFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
+F+ ++I WN++ISG ++ +V PD +++ S ISACA +G+
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
++ S++ Y + +V++ +AL++ +AKCG + AR+VFD +++ V WSAMI
Sbjct: 339 LEQARSMYEYVGRSDY-RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GYG+ G +++L+ M V PN+V F +L AC+H+GMV EGW F M D K
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKIN 456
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P +HY C++DLL RAG L++A E ++ MP++P V+++GA L C + +LGE ++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ + P +YV +SNLYA+ W RV +VR MK++GL+K GCS V++
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 234/418 (55%), Gaps = 22/418 (5%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
+L+ LK HA L+V GL + TKL+ SFG + +AR VFD +P P +
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+ +IR Y N+ ++D + Y M+ D+F F +LKAC L + G VH ++
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQE 229
++G D FV GL+ +YAKCR +GS+R VF+ ++ +VSWT++++ Y QN E
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L +F++MR+ V+ + + L S++ A L+ L QG+ +H ++K+G+EI L+ +L
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG + A+ +FD++ S +L+ W AMI GY ++GY +A+ +F + D P+ ++
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 350 IASVLSASAQLGNLNMGR-MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS 408
I S +SA AQ+G+L R M +G +D + +AL+DM+AKC + AR +F+ T
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 409 EKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
++DV+ W+++I G V P+ VT + ++ AC G V+ G
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 358 bits (918), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 213/620 (34%), Positives = 325/620 (52%), Gaps = 89/620 (14%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+ FSK+L C R + +VH I+K ++F+ L+D+Y KC + +R++F
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 204 DETLDKNV-------------------------------VSWTSMIAGYVQNDCAQEGLV 232
D L++N+ SW SMI+G+ Q+ E LV
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALV 137
Query: 233 LFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
F +M GF+ N+ + GS ++ACA L+ L G +H + + + ++ +AL+DMY
Sbjct: 138 YFAQMHGHGFLV-NEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMY 196
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
KCG + A+SVFDE+ VSW ++I Y Q+G D+ALK+F + P+ VT+A
Sbjct: 197 SKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLA 256
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFE---- 405
SV+SA A + + G+ +H+ ++ D + NAL+DMYAKC+ I +AR IF+
Sbjct: 257 SVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPI 316
Query: 406 --TTSE-------------------------KDVIAWNSIISGLDDN------------- 425
SE KDVI WN++I+G N
Sbjct: 317 RSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLL 376
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL-----SSNVYVGTALLNFY 476
V P T ++++ACA+L +Q+G H++ K G S+V+VG +L++ Y
Sbjct: 377 KRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMY 436
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
KCG ++ VF M EK+ V+W+AMI GY G G +L +F ML P+ V
Sbjct: 437 MKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMI 496
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L ACSH G++ EG F SM +P HY CMVDLL RAG LEEA +E M +
Sbjct: 497 GVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSM 556
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
+PD ++G+ L C ++ LGE ++KK+LE+ P+ + YVL+SN+YA + W V +V
Sbjct: 557 QPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRV 616
Query: 657 RELMKQRGLSKSPGCSLVDL 676
R+LM+QRG+ K PGCS +++
Sbjct: 617 RKLMRQRGVVKQPGCSWIEI 636
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 146/555 (26%), Positives = 251/555 (45%), Gaps = 97/555 (17%)
Query: 47 LPSIPCLNLLGLCKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSV 102
L S P LL C + S + HA +I ++ +L+ +YG G V AR +
Sbjct: 17 LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKL 76
Query: 103 FD-------------------------------SMPNPDFYSFQVMIRWYFLNDLYKDIV 131
FD MP D S+ MI + + + + +
Sbjct: 77 FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEAL 136
Query: 132 EFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMY 190
++ M + + F L AC L+D+ G ++H + + D ++ + LVDMY
Sbjct: 137 VYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMY 196
Query: 191 AKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLG 250
+KC + ++ VFDE ++ VSW S+I Y QN E L +F M + VE +++TL
Sbjct: 197 SKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLA 256
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRDARSVFD--- 305
S+V+ACA + A+ +G+ +H ++K E + L+ ALLDMY KC I +AR +FD
Sbjct: 257 SVVSACATISAIKEGQQIHARVVKCD-EFRNDLILGNALLDMYAKCNRINEARIIFDMMP 315
Query: 306 ----------------------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
+ D+++W A+I G TQ+G ++AL LF
Sbjct: 316 IRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRL 375
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-------DYTVINALVDM 390
K +P H T ++L+A A L +L +GR HS ++ G D V N+L+DM
Sbjct: 376 LKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDM 435
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTL 433
Y KC + + +F+ EKD ++WN++I G L+ +PD VT+
Sbjct: 436 YMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTM 495
Query: 434 VSVISACASLGAVQVGS-SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ V+ AC+ G + G + + + GL+ + T +++ + G + A+ + + M
Sbjct: 496 IGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHY-TCMVDLLGRAGYLEEAKNLIEEM 554
Query: 493 R-EKNTVTWSAMIGG 506
+ + + W +++
Sbjct: 555 SMQPDAIVWGSLLAA 569
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 358 bits (918), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 217/670 (32%), Positives = 346/670 (51%), Gaps = 80/670 (11%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T +V+ Y + G YA V + + P+P + + ++IR + + M +
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVW-WNLLIREHIKQGRLDSAINVSCRMLRAGT 113
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D+F VLKAC EL G H I G + F+ LV MY++C + +
Sbjct: 114 RLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASM 173
Query: 202 VFDETLDK---NVVSWTSMIAGYVQNDCAQEGLVLFNRM------REGFVEGNQITLGSL 252
+FDE + +V+SW S+++ +V++ A L LF++M + + I++ ++
Sbjct: 174 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 233
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD------- 305
+ AC L+A+ Q K +HG ++ G ++ + AL+D Y KCG + +A VF+
Sbjct: 234 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 293
Query: 306 ----------------------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
E +D+V+WTA+I GY+Q G +AL +F
Sbjct: 294 VSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQ 353
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-----------EDYTVINA 386
++ PN VTI SVLSA A LG + G +H+ ++ L ED V NA
Sbjct: 354 MIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNA 413
Query: 387 LVDMYAKCHVIADARYIFE--TTSEKDVIAWNSIISGL----DDN--------------- 425
L+DMY+KC AR IF+ E++V+ W +I G D N
Sbjct: 414 LIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYG 473
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALLNFYAKCGDAQS 484
V+P+A T+ ++ ACA L A+++G +HAY + S+ Y V L+N Y+KCGD +
Sbjct: 474 VAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDT 533
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR VFD+M +K+ ++W++M+ GYGM G G +L +F M P+++ F +L ACSH
Sbjct: 534 ARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 593
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
GMV +G F SM D+ P +HY +DLLAR GRL++A + +++MP+EP ++
Sbjct: 594 CGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWV 653
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
A L C ++S +L E + K++E++ + Y L+SN+YA+ GRW V ++R LMK+ G
Sbjct: 654 ALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSG 713
Query: 665 LSKSPGCSLV 674
+ K PGCS V
Sbjct: 714 IKKRPGCSWV 723
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 157/337 (46%), Gaps = 32/337 (9%)
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
L T ++ Y+ CG A V + + V W +I + + G D A+ + A
Sbjct: 53 LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADAR 401
+H T+ VL A +L + G H L G E I NALV MY++C + +A
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172
Query: 402 YIFETTSEK---DVIAWNSIIS----------GLD-------------DNVSPDAVTLVS 435
IF+ +++ DVI+WNSI+S LD N D +++V+
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
++ AC SL AV +H + + G +V+VG AL++ YAKCG ++A VF+ M K
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTF-LDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 291
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
+ V+W+AM+ GY G+ + LF +M E + + V +T +++ S G E F
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
R F S+ + V ++ +L+ L + ME
Sbjct: 352 ----RQMIFSGSLPNCVTIISVLSACASLGAFSQGME 384
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 206/611 (33%), Positives = 338/611 (55%), Gaps = 24/611 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T ++ +Y + A F MP + S+ +I + D F+K MRK ++
Sbjct: 287 TAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEK 346
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQV 202
+N+ + VL AC E I E +++H I K G DS V + L++MY+K + S +V
Sbjct: 347 INNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERV 406
Query: 203 FDETLD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
F E KN+ W MI+ + Q+ + LF RM + + ++ S+++ + +
Sbjct: 407 FREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDS 463
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G+ +H YILKIG+ + + ++L MY KCG++ ++ +VF+++ D VSW +MI G
Sbjct: 464 LSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITG 523
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-ED 380
+++ + ++A++LF + + P+ +T+ + L+A + L +L G+ VH +R + ++
Sbjct: 524 FSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKE 583
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V ALV+MY+KC I AR +F+ +KD + +S++SG N
Sbjct: 584 VLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRM 643
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ D+ T+ SVI A A L ++ +G+ LHA TK GL ++ V VG++L+ Y+KCG
Sbjct: 644 ADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGL-NAEVSVGSSLVTMYSKCGSID 702
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
VF+ + + + ++W+AMI Y G G +L ++ M E +P+ V F +LSACS
Sbjct: 703 ECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACS 762
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H GMV EG+ SM +++ P HY CMVDLL R+GRL+EA F+ NMPIEPD L+
Sbjct: 763 HNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLW 822
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
G L C ++ +LG + K+++EL P +A YV +SN+ A G W V ++R LM+
Sbjct: 823 GILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGT 882
Query: 664 GLSKSPGCSLV 674
G+ K PG S V
Sbjct: 883 GVKKEPGWSSV 893
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 160/575 (27%), Positives = 268/575 (46%), Gaps = 56/575 (9%)
Query: 66 KAFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
K HA + + +N L+ Y + +A +FD P+P+ S+ ++I
Sbjct: 65 KILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQ 124
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFV 182
N ++D + MR + + F + VL AC L G V+ +K G + +V
Sbjct: 125 NFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYV 184
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
G++D++AK + +VF + L +NVV W ++I+G V+N L LF +M F
Sbjct: 185 RAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFF 244
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N T S++TACA L L G+ + G+++K G + + TA++D+Y KC ++ A
Sbjct: 245 MPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVK 304
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F + ++VSWT +I G+ Q A F + + N+ TI SVL+A +
Sbjct: 305 EFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVM 364
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIIS 420
+ +HS + G D V +AL++MY+K V+ + +F E S K++ W +IS
Sbjct: 365 IKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMIS 424
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
L + + PD SV+S SL +G +H Y K GL
Sbjct: 425 AFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSL---SLGRLIHCYILKIGLF- 480
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+++ VG++L Y+KCG + + VF+ M +K+ V+W++MI G+ ++ LF +M
Sbjct: 481 TDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREM 540
Query: 524 LNEEVQPNEVIFTTILSACS---------------------HTGMVGEGWKCFYSMC--- 559
L EE++P+++ T L+ACS +VG YS C
Sbjct: 541 LLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAI 600
Query: 560 ----RDFKFVPSMKHYVC--MVDLLARAGRLEEAL 588
R F +P + C +V A+ G +E+AL
Sbjct: 601 VLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDAL 635
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 198/555 (35%), Positives = 314/555 (56%), Gaps = 26/555 (4%)
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
NF+ VLKAC ++ G ++H ++K G D FV L+ MY +C + +R VFD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ ++++VVSW++MI +N L L M V +++ + S+V A +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 265 GKWLHGYILKIGIEINSHL----VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
GK +H Y+++ N H+ TALLDMY KCG++ AR +F+ L +VSWTAMI
Sbjct: 214 GKAMHAYVIRN--SNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIA 271
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
G +S ++ KLF + + FPN +T+ S++ G L +G+ +H+ +R G
Sbjct: 272 GCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSV 331
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------- 422
+ ALVDMY KC I +AR +F++T +DV+ W +++S
Sbjct: 332 SLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V P VT+VS++S CA GA+ +G +H+Y K+ + + + TAL++ YAKCGD
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE-RVEVDCILNTALVDMYAKCGDI 450
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+A +F ++ W+A+I G+ M G G +L +F++M + V+PN++ F +L AC
Sbjct: 451 NAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHAC 510
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH G+V EG K F M F VP ++HY CMVDLL RAG L+EA E +++MPI+P+ +
Sbjct: 511 SHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIV 570
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA + C L+ LGE+ ++LE+ P+ Y VL+SN+YA+ RW VR+ MK
Sbjct: 571 WGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKT 630
Query: 663 RGLSKSPGCSLVDLD 677
G+ K PG S+++++
Sbjct: 631 VGMKKEPGHSVIEVN 645
Score = 233 bits (593), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 160/502 (31%), Positives = 248/502 (49%), Gaps = 33/502 (6%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H ++ GL D L+ MYG V+YAR VFD M D S+ MIR N
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 173
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK------VGGP 178
+ +E + M ++ + ++ G +H +++ +G P
Sbjct: 174 KEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVP 233
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
+ T L+DMYAKC +G +RQ+F+ K VVSWT+MIAG ++++ +EG LF RM+
Sbjct: 234 TT---TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQ 290
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
E + N+IT+ SL+ C AL GK LH YIL+ G ++ L TAL+DMY KC +IR
Sbjct: 291 EENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIR 350
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
+AR++FD + D++ WTAM+ Y Q+ D+A LF + + P VTI S+LS A
Sbjct: 351 NARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCA 410
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
G L++G+ VHS + +E ++N ALVDMYAKC I A +F +D+ WN+
Sbjct: 411 VAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNA 470
Query: 418 IISG----------LD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
II+G LD V P+ +T + ++ AC+ G V G L
Sbjct: 471 IITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF 530
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGG-GSLA 518
L + +++ + G A + +M K NT+ W A++ + + G LA
Sbjct: 531 GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELA 590
Query: 519 LFSDMLNEEVQPNEVIFTTILS 540
+ E++P + ++S
Sbjct: 591 ATQLL---EIEPENCGYNVLMS 609
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/630 (33%), Positives = 339/630 (53%), Gaps = 26/630 (4%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H ++V GL+ D + L++ Y FG AR VFD MP + + +I Y
Sbjct: 83 LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGR 142
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTG 185
+ + MR++ + + +L EL + +H C I+ D +
Sbjct: 143 VPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSELAHVQ---CLHGCAILYGFMSDINLSNS 199
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEG 244
++++Y KC +I SR++FD +++VSW S+I+ Y Q E L+L MR +GF G
Sbjct: 200 MLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAG 259
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
Q T GS+++ A L G+ LHG IL+ G +++H+ T+L+ +Y+K G I A +F
Sbjct: 260 PQ-TFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMF 318
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ D+V WTAMI G Q+G DKAL +F P+ T+ASV++A AQLG+ N
Sbjct: 319 ERSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYN 378
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
+G + +R L D N+LV MYAKC + + +F+ + +D+++WN++++G
Sbjct: 379 LGTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYA 438
Query: 423 ----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
DN +PD++T+VS++ CAS G + +G +H++ + GL +
Sbjct: 439 QNGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPC-I 497
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
V T+L++ Y KCGD +A+ F+ M + V+WSA+I GYG G G +L +S L
Sbjct: 498 LVDTSLVDMYCKCGDLDTAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLES 557
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
++PN VIF ++LS+CSH G+V +G + SM +DF P ++H+ C+VDLL+RAGR+EE
Sbjct: 558 GMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEE 617
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
A + +P + + G L C +LG+ + +L L P A +V +++ YAS
Sbjct: 618 AYNVYKKKFPDPVLDVLGIILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYAS 677
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W V + M+ GL K PG S +D+
Sbjct: 678 INKWEEVGEAWTYMRSLGLKKIPGWSFIDI 707
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 180/375 (48%), Gaps = 23/375 (6%)
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L + M + V + T SL+ AC+ L G LH IL G+ +++++ ++L++
Sbjct: 46 LATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILVSGLSLDAYIASSLINF 105
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y K G AR VFD + ++V WT +I Y+++G +A LF + + P+ VT+
Sbjct: 106 YAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTV 165
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSE 409
S+L ++L ++ + +H I G + D + N+++++Y KC I +R +F+
Sbjct: 166 LSLLFGVSELAHV---QCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDH 222
Query: 410 KDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSL 452
+D+++WNS+IS T SV+S AS G +++G L
Sbjct: 223 RDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCL 282
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H + G + +V T+L+ Y K G A +F+ +K+ V W+AMI G G
Sbjct: 283 HGQILRAGFY-LDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGS 341
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
+LA+F ML V+P+ ++++AC+ G G + R + +
Sbjct: 342 ADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQ-ELPLDVATQN 400
Query: 573 CMVDLLARAGRLEEA 587
+V + A+ G L+++
Sbjct: 401 SLVTMYAKCGHLDQS 415
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 220/692 (31%), Positives = 358/692 (51%), Gaps = 35/692 (5%)
Query: 5 SLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGS 64
+++ H S+ ++ + S P+ TF S L + LNL L S
Sbjct: 39 AIINHHSSQGAHRQVLATYASMLKTHVPSD---AYTFPSL--LKACSSLNLFSLGLS--- 90
Query: 65 LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
H ++V GL+ D + L++ Y FG AR VFD MP + + +I Y
Sbjct: 91 ---LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSR 147
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL 183
+ + MR++ + + +L EL + +H + G L
Sbjct: 148 TGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQ---CLHGSAILYGFMSDINL 204
Query: 184 TG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ ++ MY KCR+I SR++FD +++VSW S+++ Y Q E L+L MR
Sbjct: 205 SNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGF 264
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
E + T GS+++ A L G+ LHG IL+ ++++H+ T+L+ MY+K GNI A
Sbjct: 265 EPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFR 324
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F+ D+V WTAMI G Q+G DKAL +F + T+ASV++A AQLG+
Sbjct: 325 MFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGS 384
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
N+G VH R L D N+LV M+AKC + + +F+ +++++++WN++I+G
Sbjct: 385 YNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITG 444
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
D+ +PD++T+VS++ CAS G + +G +H++ + GL
Sbjct: 445 YAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPC 504
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ V T+L++ Y KCGD A+ F+ M + V+WSA+I GYG G G +L +S L
Sbjct: 505 -ILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKGETALRFYSKFL 563
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
++PN VIF ++LS+CSH G+V +G + SM RDF P+++H+ C+VDLL+RAGR+
Sbjct: 564 ESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHACVVDLLSRAGRV 623
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
EEA + +P + + G L C +LG+ + +L L P A +V +++ Y
Sbjct: 624 EEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMDAGNFVQLAHCY 683
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
AS +W V + M+ GL K PG S +D+
Sbjct: 684 ASINKWEEVGEAWTHMRSLGLKKIPGWSFIDI 715
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 190/393 (48%), Gaps = 23/393 (5%)
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
S+ ++I + ++ L + M + V + T SL+ AC+ L G LH I
Sbjct: 36 SFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRI 95
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
L G+ +++++ ++L++ Y K G AR VFD + ++V WT++I Y+++G +A
Sbjct: 96 LVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAF 155
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMY 391
LF + + P+ VT+ S+L ++L ++ + +H I G + D + N+++ MY
Sbjct: 156 SLFDEMRRQGIQPSSVTMLSLLFGVSELAHV---QCLHGSAILYGFMSDINLSNSMLSMY 212
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLV 434
KC I +R +F+ ++D+++WNS++S PD T
Sbjct: 213 GKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFG 272
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
SV+S AS G +++G LH + + +V T+L+ Y K G+ A +F+ +
Sbjct: 273 SVLSVAASRGELKLGRCLHGQILRT-CFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLD 331
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
K+ V W+AMI G G +LA+F ML V+ + ++++AC+ G G
Sbjct: 332 KDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSV 391
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
M R + + +V + A+ G L+++
Sbjct: 392 HGYMFRH-ELPMDIATQNSLVTMHAKCGHLDQS 423
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 223/657 (33%), Positives = 358/657 (54%), Gaps = 72/657 (10%)
Query: 47 LPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSV 102
L S +LL LC ++ +L K H +I+ GL + TKLV MY G + A+++
Sbjct: 21 LSSFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQAL 80
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
FD + P+ +++ ++ +Y N L + V Y M+ + D +VF KV +AC +L +
Sbjct: 81 FDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWL 140
Query: 163 DEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
+ G++VH ++V G D V L+DMY+K D+GS R+VFDE ++++V+SW SMI+GY
Sbjct: 141 EVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGY 200
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
V N GF+E + L S+ ++R G E +
Sbjct: 201 VCN---------------GFLEFSVELLASM-----RIR---------------GFEPDM 225
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD---K 338
++D Y + G +A +F+++ +++S T ++ GY++ G +K+L +F + +
Sbjct: 226 VTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSR 285
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN----ALVDMYAKC 394
+ A FP+ +++SVL + LG L G+ +H GIR ++ + AL+ MY KC
Sbjct: 286 RVA--FPDLDSLSSVLVSCRHLGALVCGQEIHGYGIR-SVDSSSFYKSAGAALLTMYVKC 342
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVI 437
I DA +FE DV+ WN++I G D + + +T+ +V+
Sbjct: 343 KRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVL 402
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
AC ++ G +HAY TK SS + V AL++ Y+KCG +A +F M ++
Sbjct: 403 PACD----LKSGKQVHAYITKNSF-SSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDL 457
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V+W+ MIGG+GM G G +L L DM + +V PN V FT+ LSACSH+G+V EG + F++
Sbjct: 458 VSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHT 517
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
M RDF F P M+H+ C+VDLLARA RLE+A+ F+E MP++P ++ A L C
Sbjct: 518 MTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVS 577
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+ ++ +++ +L P+ A YV +SN+YA GRW VR+LM+ RGL K G S +
Sbjct: 578 VAKLAAEQLFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRKLMEDRGLVKPSGYSWI 634
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 203/664 (30%), Positives = 347/664 (52%), Gaps = 56/664 (8%)
Query: 64 SLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
S K H ++ G+ D ++ V+ Y V+ A++VFD MP+ D ++ + Y
Sbjct: 159 SGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYV 218
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
+ + ++ M + D S +L AC +L+D+ G +H +K G ++ F
Sbjct: 219 NCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVF 278
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V LV++Y C + ++ VFD +NV++W S+ + YV Q+GL +F M
Sbjct: 279 VSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNG 338
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V+ + + + S++ AC++L+ L GK +HG+ +K G+ + + TAL+++Y C +R+A+
Sbjct: 339 VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQ 398
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+VFD + ++V+W ++ Y G+P K L +F + P+ VT+ S+L A + L
Sbjct: 399 TVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQ 458
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L G+++H +R G+ ED V NAL+ +YAKC + +A+ +F+ ++V +WN I++
Sbjct: 459 DLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILT 518
Query: 421 GLDDN----------------------------------------------------VSP 428
N P
Sbjct: 519 AYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKP 578
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D T+ S++ AC+ +++G +H Y + ++ AL++ YAKCG +R V
Sbjct: 579 DETTIYSILRACSLSECLRMGKEIHCYVFRH-WKDWDLARTNALVDMYAKCGGLSLSRNV 637
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
FD M K+ +W+ MI GM G+G +L+LF ML V+P+ FT +LSACSH+ +V
Sbjct: 638 FDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLV 697
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
EG + F SM RD P +HY C+VD+ +RAG LEEA F++ MP+EP + AFL
Sbjct: 698 EEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLA 757
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
GC +Y +L ++ KK+ E+ P+ + YV + N+ + W +++R+LMK+RG++K+
Sbjct: 758 GCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKT 817
Query: 669 PGCS 672
PGCS
Sbjct: 818 PGCS 821
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 166/636 (26%), Positives = 312/636 (49%), Gaps = 64/636 (10%)
Query: 65 LKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+K FH G+ +D + YG V+ AR VFD + D ++ + Y
Sbjct: 59 VKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVN 118
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFV 182
+ + ++ M + + S +L C +L+D+ G ++H +V+ G D FV
Sbjct: 119 CGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFV 178
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ V+ YAKC + ++ VFD ++VV+W S+ + YV Q+GL +F M V
Sbjct: 179 SSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGV 238
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + +T+ +++AC+ L+ L GK +HG+ LK G+ N + AL+++Y C +R+A++
Sbjct: 239 KPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQA 298
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VFD + ++++W ++ Y G+P K L +F + P+ + ++S+L A +QL +
Sbjct: 299 VFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKD 358
Query: 363 LNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS- 420
L G+ +H ++ G+ ED V ALV++YA C + +A+ +F+ ++V+ WNS+ S
Sbjct: 359 LKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSC 418
Query: 421 ---------GLD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
GL+ + V PD VT++S++ AC+ L ++ G +H ++ + G++
Sbjct: 419 YVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVE- 477
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+V+V ALL+ YAKC + A++VFD + + +W+ ++ Y + L +FS M
Sbjct: 478 DVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMN 537
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS----------------- 567
+EV+ +E+ ++ ++ C + E + F M + F P
Sbjct: 538 RDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKM-QTMGFKPDETTIYSILRACSLSECL 596
Query: 568 ----------MKHYV--------CMVDLLARAGRLEEALEFMENMPIEP----DVSLFGA 605
+H+ +VD+ A+ G L + + MPI+ + +F
Sbjct: 597 RMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFAN 656
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
+HG G + L E M+ M++ PD A + ++S
Sbjct: 657 GMHGNGKEA-LSLFEKMLLSMVK--PDSATFTCVLS 689
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/565 (27%), Positives = 290/565 (51%), Gaps = 42/565 (7%)
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
L + ++ Y R R + D VF V KAC RD + + H + + G D +
Sbjct: 20 LPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGN 79
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
+ Y KC+ + +R+VFD+ + ++VV+W S+ A YV Q+GL +F +M V+
Sbjct: 80 AFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKA 139
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N +T+ S++ C+ L+ L GK +HG++++ G+ + + +A ++ Y KC +R+A++VF
Sbjct: 140 NPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVF 199
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + D+V+W ++ Y G+P K L +F + P+ VT++ +LSA + L +L
Sbjct: 200 DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLK 259
Query: 365 MGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS--- 420
G+ +H ++ G+ E+ V NALV++Y C + +A+ +F+ ++VI WNS+ S
Sbjct: 260 SGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYV 319
Query: 421 -------GLD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
GL+ + V PD + + S++ AC+ L ++ G ++H ++ K G++ +V
Sbjct: 320 NCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMV-EDV 378
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+V TAL+N YA C + A+ VFD M +N VTW+++ Y G L +F +M+
Sbjct: 379 FVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLN 438
Query: 527 EVQPNEVIFTTILSACS-----HTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLA 579
V+P+ V +IL ACS +G V G+ + M D +VC ++ L A
Sbjct: 439 GVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV--------FVCNALLSLYA 490
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYY 637
+ + EA + +P +V+ + L ++ G M +M E+ D+ +
Sbjct: 491 KCVCVREAQVVFDLIP-HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWS 549
Query: 638 VLVSNLYASDGRWIRVNQVRELMKQ 662
V++ + R+ + E+ ++
Sbjct: 550 VVIGGCVKNS----RIEEAMEIFRK 570
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 176/405 (43%), Gaps = 46/405 (11%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
K S K H + G+ D T LV++Y + V+ A++VFD MP+ + ++ +
Sbjct: 357 KDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLS 416
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG- 177
Y + + ++ M + D +L AC +L+D+ G +H V+ G
Sbjct: 417 SCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMV 476
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FV L+ +YAKC + ++ VFD + V SW ++ Y N ++GL +F++M
Sbjct: 477 EDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQM 536
Query: 238 REGFVEGNQITLGSLVTACAK-----------------------------LRA------L 262
V+ ++IT ++ C K LRA L
Sbjct: 537 NRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECL 596
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H Y+ + + + AL+DMY KCG + +R+VFD + D+ SW MI
Sbjct: 597 RMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFAN 656
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL---- 378
G +AL LF + P+ T VLSA + + G + + R L
Sbjct: 657 GMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPE 716
Query: 379 -EDYTVINALVDMYAKCHVIADAR-YIFETTSEKDVIAWNSIISG 421
E YT + VD+Y++ + +A +I E IAW + ++G
Sbjct: 717 AEHYTCV---VDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAG 758
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 121/236 (51%), Gaps = 19/236 (8%)
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVI 384
G P++A+K++T + P+ +V A A + + H R G + D ++
Sbjct: 19 GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNVS 427
NA + Y KC + AR +F+ +DV+ WNS+ + GL+ + V
Sbjct: 79 NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
+ +T+ S++ C+ L ++ G +H + + G++ +V+V +A +NFYAKC + A+
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMV-EDVFVSSAFVNFYAKCLCVREAQT 197
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
VFD M ++ VTW+++ Y G L +F +M+ + V+P+ V + ILSACS
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 172/411 (41%), Gaps = 73/411 (17%)
Query: 53 LNLLGLCKSTGSLKA---FHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMP 107
L++L C LK+ H + G+ D CN L+S+Y V+ A+ VFD +P
Sbjct: 448 LSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNA-LLSLYAKCVCVREAQVVFDLIP 506
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ + S+ ++ YF N Y+ + + M + + D +S V+ C + I+E M+
Sbjct: 507 HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAME 566
Query: 168 VHCEIVKVG-GPDSFVL-----------------------------------TGLVDMYA 191
+ ++ +G PD + LVDMYA
Sbjct: 567 IFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYA 626
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC + SR VFD K+V SW +MI + +E L LF +M V+ + T
Sbjct: 627 KCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTC 686
Query: 252 LVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDEL-CS 309
+++AC+ + +G + + + +E + T ++D+Y + G + +A +
Sbjct: 687 VLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPME 746
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP----NHVTIASVL------SASAQ 359
++W A + G Y + L + KK + P N+VT+ ++L S +++
Sbjct: 747 PTAIAWKAFLAGCRV--YKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASK 804
Query: 360 LGNL---------------NMGRMVHSL--GIRLGLEDYTVINALVDMYAK 393
+ L ++G VH+ G + +E + N L +++AK
Sbjct: 805 IRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAK 855
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 212/642 (33%), Positives = 347/642 (54%), Gaps = 30/642 (4%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H I G D T LV MY V+ VFD M + S+ ++ Y N
Sbjct: 112 KQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQN 171
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT 184
L + ++ + M+ + + F F+ VL +++G++VH ++K G DS +
Sbjct: 172 GLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-SGLDSTIFV 230
Query: 185 G--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
G +V+MY+K + ++ VFD ++N VSW SMIAG+V N E LF RMR V
Sbjct: 231 GNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV 290
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ Q +++ CA ++ + K LH ++K G + + ++ TAL+ Y KC I DA
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350
Query: 303 VFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+F + + ++VSWTA+I GY Q+G D+A+ LF + PNH T +++L+A+A +
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTANAAVS 410
Query: 362 NLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+H+L ++ E+ +V AL D Y+K +A IFE EKD++AW++++S
Sbjct: 411 ----PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLS 466
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLL 462
G + V P+ T SV++ACA+ A V+ G H+ S K G
Sbjct: 467 GYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGF- 525
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S+ + V +AL+ YAK G+ +SA VF +++ V+W++MI GY G G SL +F +
Sbjct: 526 SNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEE 585
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M ++ ++ + + F ++SAC+H G+V EG + F M +D+ VP+M+HY CMVDL +RAG
Sbjct: 586 MRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAG 645
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
LE+A++ + MP +++ L C ++ LGE+ +K++ L P + YVL+SN
Sbjct: 646 MLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSN 705
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSF 684
+YA+ G W +VR+LM + + K G S +++ FSF
Sbjct: 706 IYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVK-NKTFSF 746
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 169/556 (30%), Positives = 276/556 (49%), Gaps = 30/556 (5%)
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
+++ +FD P ++ + ND K+ + + +R+ D S VLK C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
L D G +VHC+ +K G D V T LVDMY K + +VFDE KNVVSWTS
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
++AGY QN ++ L LF++M+ ++ N T +++ A A+ +G +H ++K G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
++ + ++++MY K + DA++VFD + + + VSW +MI G+ +G +A +LF
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ A+V+ A + ++ + +H I+ G + D + AL+ Y+KC
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343
Query: 396 VIADARYIF-ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVI 437
I DA +F ++V++W +IISG N V P+ T +++
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTIL 403
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
+A A++ Q+ HA K +S VGTAL + Y+K GDA A +F+ + EK+
Sbjct: 404 TANAAVSPSQI----HALVVKTNYENSP-SVGTALSDSYSKIGDANEAAKIFELIDEKDI 458
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V WSAM+ GY GD G++ +F + E V+PNE F+++L+AC+ E K F+S
Sbjct: 459 VAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHS 518
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS----LFGAFLHGCGLY 613
F ++ +V + A+ G +E A E + VS + G HGCG
Sbjct: 519 CSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKK 578
Query: 614 SRFDLGEVMIKKMLEL 629
S + E M K LEL
Sbjct: 579 S-LKIFEEMRSKNLEL 593
>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 213/617 (34%), Positives = 325/617 (52%), Gaps = 38/617 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSF-QVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L +Y + G A ++ MP P SF ++R Y +++ + Y MR
Sbjct: 51 LFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRA----F 106
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+ F KAC LR G VHC + G G D++V L+ MY C D+G++ VF
Sbjct: 107 DHLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVF 166
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
++ VVSW ++IAG V+N A+ L +F M V ++ T+ S++ ACA+ + L+
Sbjct: 167 GAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQAKDLN 226
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS--IDLVSWTAMIVG 321
G+ +H + G+ + AL+DMY KC ++ DAR VFD C D+VSWTAMI
Sbjct: 227 TGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDH-CKHDKDVVSWTAMIGA 285
Query: 322 YTQSGYPDKALKL-----FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
Y + +A+ L + W PN VT+ +LSA A + + + H+L IRL
Sbjct: 286 YVLNDRAFEAISLGCQMLMSGAAW----PNGVTMVYLLSACASMPSGKHAKCTHALCIRL 341
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------- 421
GL+ D V AL+D YA+C + R E S + WN+ +SG
Sbjct: 342 GLKSDIAVETALIDAYARCGKMKLMRLTLERGSWR-AETWNAALSGYTVSGREKKAIELF 400
Query: 422 ---LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ ++V PD+ T+ S++ A A ++ G ++H + G L S + T L++ Y+K
Sbjct: 401 KRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLLTLGFLRST-EIATGLIDVYSK 459
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
GD +A +F + EK+ V W+ +I GY + G ++ L+ M+ +PN V T+
Sbjct: 460 AGDLDAAWALFQWLPEKDVVAWTTIIAGYSIHGHARTAILLYDRMVESGGKPNTVTIATL 519
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L ACSH GM+ EG K F M +P+ +HY C+VD+L RAGR+EEA +++MP EP
Sbjct: 520 LYACSHAGMIDEGIKVFKDMRNVHGLMPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEP 579
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
S++GA L C L+ + GEV K++ +L P+ YVL+ N+YA+ RW V VR
Sbjct: 580 STSVWGALLGACVLHKNVEFGEVAAKRLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRR 639
Query: 659 LMKQRGLSKSPGCSLVD 675
+M +RGL K PG SLV+
Sbjct: 640 MMVERGLLKEPGSSLVE 656
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 167/376 (44%), Gaps = 31/376 (8%)
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT-AMIVGYTQSGYPDKALKLFTDKKW 340
H + L +Y CG A ++ ++ VS++ +++ YT G +AL +++ +
Sbjct: 46 HGLHPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRA 105
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIAD 399
D H+T A A L GR VH + G D V NAL+ MY C +
Sbjct: 106 FD----HLTFPFAAKACAGLRLGRHGRAVHCRALAAGFGGDTYVQNALISMYMSCGDVGA 161
Query: 400 ARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACAS 442
A +F + V++WN++I+G D V D T+VSV+ ACA
Sbjct: 162 AEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVVSVLPACAQ 221
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWS 501
+ G ++H +G L V V AL++ Y KC + AR VFD + +K+ V+W+
Sbjct: 222 AKDLNTGRAVHRLVEDKG-LGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHDKDVVSWT 280
Query: 502 AMIGGYGMQGDGGGSLALFSDML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
AMIG Y + +++L ML + PN V +LSAC+ G+ KC +++C
Sbjct: 281 AMIGAYVLNDRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMP-SGKHAKCTHALCI 339
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ ++D AR G+++ +E + + A L G + R
Sbjct: 340 RLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAET--WNAALSGYTVSGREKKAI 397
Query: 621 VMIKKML--ELHPDKA 634
+ K+M+ + PD A
Sbjct: 398 ELFKRMIAESVRPDSA 413
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 204/614 (33%), Positives = 335/614 (54%), Gaps = 27/614 (4%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
M + R VFD+M ++ +I WY + Y + V+ + M K +
Sbjct: 153 MVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVS 212
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDE 205
F V A L D VH +VK+G D +V++ + MYA+ + +++VFD
Sbjct: 213 FVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN 272
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG-NQITLGSLVTACAKLRALHQ 264
L++N W +MI+ +VQN+ + EG+ LF + E +++TL S ++A + L+
Sbjct: 273 CLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFEL 332
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ LH +++K ++ AL+ MY +C +I + +FD + D+VSW MI + Q
Sbjct: 333 AEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQ 392
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+G D+AL LF + K D + VT+ ++LSA++ L N ++G+ H +R G++ +
Sbjct: 393 NGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD 452
Query: 385 NALVDMYAKCHVIADARYIFETT--SEKDVIAWNSIISG-----------------LDDN 425
+ L+DMYAK +I A+ +FE + E+D WNS++SG LD
Sbjct: 453 SYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQK 512
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V P+ VTL S++ AC G + G LH +S + L NV+V TAL++ Y+K G A
Sbjct: 513 VMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDL-DQNVFVATALIDMYSKSGSIAHA 571
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF EK+ VT+S MI GYG G G +L +F M +QP+ V +LSACS+
Sbjct: 572 ENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYA 631
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV-SLFG 604
G+V EG + F SM + PS +H+ C+ D+L RAGR+++A EF+ + + +V ++G
Sbjct: 632 GLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWG 691
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHP--DKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ L C ++ +F+LG+++ KK+LE+ K Y+VL+SN+YA + W V+ VR+ M++
Sbjct: 692 SLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRE 751
Query: 663 RGLSKSPGCSLVDL 676
RGL K G S +++
Sbjct: 752 RGLKKETGSSWIEI 765
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 148/593 (24%), Positives = 289/593 (48%), Gaps = 53/593 (8%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH--DNFVFSK 151
G + AR +FD++P P + +I N+ + + FY M+ + D++ +S
Sbjct: 42 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 101
Query: 152 VLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSS----------- 199
VLKAC + R++ G VH ++ + P V L++MY+ C
Sbjct: 102 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 161
Query: 200 --RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
R+VFD + VV+W ++IA YV+ + E + F+ M + ++ + ++ ++ A +
Sbjct: 162 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 221
Query: 258 KLRALHQGKWLHGYILKIGIE-INS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
L +HG ++K+G E +N ++V++ + MY + G + A+ VFD + W
Sbjct: 222 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 281
Query: 316 TAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
MI + Q+ + + ++LF + D + VT+ S +SA++ L + +H+ I
Sbjct: 282 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 341
Query: 375 R-LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDD---- 424
+ + + V+NAL+ MY++C+ I + IF+ EKDV++WN++IS GL+D
Sbjct: 342 KNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALM 401
Query: 425 --------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
++ D+VT+ +++SA + L +G H Y + G+ + + L++ Y
Sbjct: 402 LFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG--MDSYLIDMY 459
Query: 477 AKCGDAQSARMVFDA--MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
AK G ++A+ VF+ E++ TW++M+ GY G + + ML+++V PN V
Sbjct: 460 AKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVT 519
Query: 535 FTTILSACSHTGMVGEGWKCF-YSMCRDFK---FVPSMKHYVCMVDLLARAGRLEEALEF 590
+IL AC+ +G + G + +S+ D FV + ++D+ +++G + A E
Sbjct: 520 LASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVAT-----ALIDMYSKSGSIAHA-EN 573
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ + E + + + G G + + M +M + + PD ++S
Sbjct: 574 VFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLS 626
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 173/331 (52%), Gaps = 17/331 (5%)
Query: 49 SIPCLNLLGLCKSTGSLKAF------HALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARS 101
+I + LL + L+ F HA +I + C L++MY + +
Sbjct: 311 AIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFK 370
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+FD+MP D S+ MI + N L + + + M+K+ D+ + +L A +LR+
Sbjct: 371 IFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRN 430
Query: 162 IDEGMKVHCEIVKVG----GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL--DKNVVSWT 215
D G + H +++ G G DS+ L+DMYAK I +++ VF+++ +++ +W
Sbjct: 431 PDIGKQTHGYLLRNGIQFEGMDSY----LIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 486
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
SM++GY QN + ++ +M + V N +TL S++ AC + GK LHG+ ++
Sbjct: 487 SMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRN 546
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
++ N + TAL+DMY K G+I A +VF + +V+++ MI+GY Q G + AL +F
Sbjct: 547 DLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMF 606
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ + P+ VT+ +VLSA + G ++ G
Sbjct: 607 HRMQKSGIQPDAVTLVAVLSACSYAGLVDEG 637
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 212/657 (32%), Positives = 347/657 (52%), Gaps = 35/657 (5%)
Query: 49 SIPCLNLLGLCKSTGSLKAFHALLIVDGLTND---KCN----TKLVSMYGSFGHVKYARS 101
+ PCL K+ +LK F + + + CN + L+ Y +G + A
Sbjct: 136 TFPCL-----VKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGK 190
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+FD + D + VM+ Y +++ + MR + F VL C
Sbjct: 191 LFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLL 250
Query: 162 IDEGMKVHCEIVKVGGPD--SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
ID G+++H +V V G D + L+ MY+KC + ++F + V+W MI+
Sbjct: 251 IDLGVQLH-GLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMIS 309
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GYVQ+ +E L+ F M V + IT SL+ + +K L + +H YI++ I +
Sbjct: 310 GYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISL 369
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ L +AL+D Y KC + A+ +F + S+D+V +TAMI GY +G AL++F
Sbjct: 370 DIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLV 429
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIA 398
PN +T+ S+L L L +GR +H I+ G ++ I A++DMYAKC +
Sbjct: 430 KVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 489
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDNVSP-----------------DAVTLVSVISACA 441
A IF S++D+++WNS+I+ + +P D V++ + +SACA
Sbjct: 490 LAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACA 549
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+L + G ++H + K L + +VY + L++ YAKCG+ ++A VFD M+EKN V+W+
Sbjct: 550 NLPSESFGKAIHGFMIKHSL-ALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWN 608
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
++I YG G SL LF +M+ + +P+++ F I+S C H G V EG + F SM +
Sbjct: 609 SIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQ 668
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
D+ P +HY C+VDL RAGRL EA E +++MP PD ++G L L+ +L +
Sbjct: 669 DYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAK 728
Query: 621 VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
V ++++L P + YYVL+SN +A+ G W V +VR LMK+R + K PG S ++++
Sbjct: 729 VASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEIN 785
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 200/414 (48%), Gaps = 26/414 (6%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIV--KVGGPDSFVLTGLVDMYAKCRDIGSSRQVF--- 203
S +L+ C L + +G +VH ++ ++ G DS+ ++ MYA C + ++F
Sbjct: 34 LSLLLQDCSNLTLLRQGKQVHAFVIVNRISG-DSYTDERILGMYAMCGSFSNCGKMFYRL 92
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D L ++ W S+I+ +V+ + L + +M V + T LV AC L+
Sbjct: 93 DSRLS-SIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 151
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
++L + +G++ N + ++L+ Y++ G I A +FD + D V W M+ GY
Sbjct: 152 GIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYA 211
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
+ G D +K F+ + PN VT VLS A +++G +H L + GL+ + +
Sbjct: 212 KCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGS 271
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ N+L+ MY+KC DA +F S D + WN +ISG +
Sbjct: 272 IKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSG 331
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V PDA+T S++ + + ++ +H Y + +S ++++ +AL++ Y KC A
Sbjct: 332 VLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHS-ISLDIFLTSALIDAYFKCRGVSMA 390
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
+ +F + V ++AMI GY G +L +F ++ ++ PNE+ +IL
Sbjct: 391 QKIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSIL 444
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 144/315 (45%), Gaps = 21/315 (6%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L L+ C+ L L QGK +H +++ I +S+ +L MY CG+ + +F L
Sbjct: 34 LSLLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLD 93
Query: 309 S--IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
S + W ++I + + G ++AL + P+ T ++ A L N
Sbjct: 94 SRLSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 153
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN--------- 416
+ LG++ + V ++L+ Y + I A +F+ +KD + WN
Sbjct: 154 EFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKC 213
Query: 417 ----SIISGLD----DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
S+I G D +SP+AVT V+S CAS + +G LH G L +
Sbjct: 214 GASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG-LDFEGSI 272
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+LL+ Y+KCG A +F M +TVTW+ MI GY G SL F +M++ V
Sbjct: 273 KNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGV 332
Query: 529 QPNEVIFTTILSACS 543
P+ + F+++L + S
Sbjct: 333 LPDAITFSSLLPSVS 347
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 220/649 (33%), Positives = 353/649 (54%), Gaps = 22/649 (3%)
Query: 49 SIPC-LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSM 106
+ PC L G+ + H L+I G + LVSMY + AR +FD M
Sbjct: 12 TFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRM 71
Query: 107 -PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
D S+ +I Y LN + + ++ M+K + + L+AC + G
Sbjct: 72 NERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLG 131
Query: 166 MKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
M++H I+K D +V LV M+ + + + ++FDE +K+ ++W SMIAG+ QN
Sbjct: 132 MEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQN 191
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E L F +++ ++ ++++L S++ A +L L GK +H Y +K ++ N +
Sbjct: 192 GLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIG 251
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
L+DMY KC + A VFD++ + DL+SWT +I Y Q+ +ALKL +
Sbjct: 252 NTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMD 311
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
+ + I S L A + L L+ + VH ++ GL D + N ++D+YA C I A +F
Sbjct: 312 VDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMF 371
Query: 405 ETTSEKDVIAWNSIIS-----GL------------DDNVSPDAVTLVSVISACASLGAVQ 447
E+ KDV++W S+IS GL + +V PD++TLVS++SA ASL A+
Sbjct: 372 ESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALN 431
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +H + ++G + V +L++ YA CG ++A VF R K+ V W+ MI Y
Sbjct: 432 KGKEIHGFIFRKGFMLEGSTV-NSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAY 490
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GM G G ++ LFS M ++++ P+ + F +L ACSH+G++ EG + +M ++ P
Sbjct: 491 GMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPW 550
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+HY C+VDLL RA LEEA F+++M IEP ++ AFL C ++S LGE+ +K+L
Sbjct: 551 PEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEIAAQKLL 610
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+L PD YVL+SN++A+ GRW V +VR MK GL K+PGCS +++
Sbjct: 611 DLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEV 659
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 166/553 (30%), Positives = 277/553 (50%), Gaps = 60/553 (10%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQV 202
D+F F VLKAC + DI G ++H I+K G DS FV LV MYAKC DI +R++
Sbjct: 9 DSFTFPCVLKACGVVEDIHRGAEIHGLIIKC-GYDSIVFVANSLVSMYAKCNDILGARKL 67
Query: 203 FDETLDKN-VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
FD ++N VVSW S+I+ Y N E L LF M++ V N TL + + AC
Sbjct: 68 FDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSF 127
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
G +H ILK ++ ++ AL+ M+V+ G + A +FDEL D ++W +MI G
Sbjct: 128 KKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAG 187
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
+TQ+G ++AL+ F + A+ P+ V++ S+L+AS +LG L G+ +H+ ++ L+ +
Sbjct: 188 FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN 247
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
+ N L+DMY+KC +A A +F+ KD+I+W ++I+ N
Sbjct: 248 LRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQT 307
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ D + + S + AC+ L + +H Y+ K+GL S++ + +++ YA CG+
Sbjct: 308 KGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL--SDLMMQNMIIDVYADCGNIN 365
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A +F++++ K+ V+W++MI Y G +L +F M V+P+ + +ILSA +
Sbjct: 366 YATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAA 425
Query: 544 ----------------HTGMVGEG---------WKCFYSMCRDFKFV-----PSMKHYVC 573
G + EG + C S+ +K S+ +
Sbjct: 426 SLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTT 485
Query: 574 MVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM---L 627
M++ GR + A+E ME+ + PD F A L+ C + G+ +++ M
Sbjct: 486 MINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKY 545
Query: 628 ELHPDKACYYVLV 640
+L P Y LV
Sbjct: 546 QLEPWPEHYACLV 558
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 203/426 (47%), Gaps = 43/426 (10%)
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
MR V + T ++ AC + +H+G +HG I+K G + + +L+ MY KC +
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 297 IRDARSVFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
I AR +FD + D+VSW ++I Y+ +G +AL LF + + A N T+ + L
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120
Query: 356 ASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A +G +H+ ++ + D V NALV M+ + ++ A IF+ EKD I
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNIT 180
Query: 415 WNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
WNS+I+G D N+ PD V+L+S+++A LG + G +HAY+
Sbjct: 181 WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAM 240
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K L SN+ +G L++ Y+KC A +VFD M K+ ++W+ +I Y +L
Sbjct: 241 KN-WLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEAL 299
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF--------YSMCRDFKFVPSMK 569
L + + + + ++ + L ACS G +C Y++ R + M+
Sbjct: 300 KLLRKVQTKGMDVDTMMIGSTLLACS-------GLRCLSHAKEVHGYTLKRGLSDL-MMQ 351
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDV---SLFGAFLHGCGLYSRFDLGEVMIKKM 626
+ + +D+ A G + A E++ + V S+ ++H GL + LG + K
Sbjct: 352 NMI--IDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHN-GLANE-ALGVFYLMKE 407
Query: 627 LELHPD 632
+ PD
Sbjct: 408 TSVEPD 413
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 204/614 (33%), Positives = 335/614 (54%), Gaps = 27/614 (4%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
M + R VFD+M ++ +I WY + Y + V+ + M K +
Sbjct: 129 MVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVS 188
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDE 205
F V A L D VH +VK+G D +V++ + MYA+ + +++VFD
Sbjct: 189 FVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDN 248
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG-NQITLGSLVTACAKLRALHQ 264
L++N W +MI+ +VQN+ + EG+ LF + E +++TL S ++A + L+
Sbjct: 249 CLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFEL 308
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ LH +++K ++ AL+ MY +C +I + +FD + D+VSW MI + Q
Sbjct: 309 AEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQ 368
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+G D+AL LF + K D + VT+ ++LSA++ L N ++G+ H +R G++ +
Sbjct: 369 NGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMD 428
Query: 385 NALVDMYAKCHVIADARYIFETT--SEKDVIAWNSIISG-----------------LDDN 425
+ L+DMYAK +I A+ +FE + E+D WNS++SG LD
Sbjct: 429 SYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQK 488
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V P+ VTL S++ AC G + G LH +S + L NV+V TAL++ Y+K G A
Sbjct: 489 VMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDL-DQNVFVATALIDMYSKSGSIAHA 547
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF EK+ VT+S MI GYG G G +L +F M +QP+ V +LSACS+
Sbjct: 548 ENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYA 607
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV-SLFG 604
G+V EG + F SM + PS +H+ C+ D+L RAGR+++A EF+ + + +V ++G
Sbjct: 608 GLVDEGLQIFESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWG 667
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHP--DKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ L C ++ +F+LG+++ KK+LE+ K Y+VL+SN+YA + W V+ VR+ M++
Sbjct: 668 SLLAACRIHKQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRE 727
Query: 663 RGLSKSPGCSLVDL 676
RGL K G S +++
Sbjct: 728 RGLKKETGSSWIEI 741
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/593 (24%), Positives = 289/593 (48%), Gaps = 53/593 (8%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH--DNFVFSK 151
G + AR +FD++P P + +I N+ + + FY M+ + D++ +S
Sbjct: 18 GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77
Query: 152 VLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSS----------- 199
VLKAC + R++ G VH ++ + P V L++MY+ C
Sbjct: 78 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137
Query: 200 --RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
R+VFD + VV+W ++IA YV+ + E + F+ M + ++ + ++ ++ A +
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFS 197
Query: 258 KLRALHQGKWLHGYILKIGIE-INS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
L +HG ++K+G E +N ++V++ + MY + G + A+ VFD + W
Sbjct: 198 SLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 257
Query: 316 TAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
MI + Q+ + + ++LF + D + VT+ S +SA++ L + +H+ I
Sbjct: 258 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 317
Query: 375 R-LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDD---- 424
+ + + V+NAL+ MY++C+ I + IF+ EKDV++WN++IS GL+D
Sbjct: 318 KNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALM 377
Query: 425 --------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
++ D+VT+ +++SA + L +G H Y + G+ + + L++ Y
Sbjct: 378 LFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG--MDSYLIDMY 435
Query: 477 AKCGDAQSARMVFDA--MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
AK G ++A+ VF+ E++ TW++M+ GY G + + ML+++V PN V
Sbjct: 436 AKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVT 495
Query: 535 FTTILSACSHTGMVGEGWKCF-YSMCRDFK---FVPSMKHYVCMVDLLARAGRLEEALEF 590
+IL AC+ +G + G + +S+ D FV + ++D+ +++G + A E
Sbjct: 496 LASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVAT-----ALIDMYSKSGSIAHA-EN 549
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ + E + + + G G + + M +M + + PD ++S
Sbjct: 550 VFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLS 602
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 173/331 (52%), Gaps = 17/331 (5%)
Query: 49 SIPCLNLLGLCKSTGSLKAF------HALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARS 101
+I + LL + L+ F HA +I + C L++MY + +
Sbjct: 287 AIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFK 346
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+FD+MP D S+ MI + N L + + + M+K+ D+ + +L A +LR+
Sbjct: 347 IFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRN 406
Query: 162 IDEGMKVHCEIVKVG----GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL--DKNVVSWT 215
D G + H +++ G G DS+ L+DMYAK I +++ VF+++ +++ +W
Sbjct: 407 PDIGKQTHGYLLRNGIQFEGMDSY----LIDMYAKSGLIEAAQNVFEKSFSHERDQATWN 462
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
SM++GY QN + ++ +M + V N +TL S++ AC + GK LHG+ ++
Sbjct: 463 SMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRN 522
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
++ N + TAL+DMY K G+I A +VF + +V+++ MI+GY Q G + AL +F
Sbjct: 523 DLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMF 582
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ + P+ VT+ +VLSA + G ++ G
Sbjct: 583 HRMQKSGIQPDAVTLVAVLSACSYAGLVDEG 613
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 195/551 (35%), Positives = 307/551 (55%), Gaps = 20/551 (3%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ F S VL AC L D + GMKVH ++K+G D F L+DMYAK ++ VF
Sbjct: 187 NEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVF 246
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
E ++VSW ++IAG V ++ L L +M V + TL S + ACA + +
Sbjct: 247 YEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVK 306
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ LH ++K+ +E +S + L+DMY KCG ++DAR VFD + D++ W ++I GY+
Sbjct: 307 LGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYS 366
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
GY +A+ LFT+ N T++++L ++A VH++ I+ G + D
Sbjct: 367 NCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGY 426
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
V N+L+D Y KC ++ DA +FE +D++A+ S+I+ D +
Sbjct: 427 VANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRD 486
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PDA S+ +ACA+L A + G +H + K GLLS +V+ G +L+N YAKCG A
Sbjct: 487 IKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLS-DVFAGNSLVNMYAKCGSIDDA 545
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+F+ + + V+WSAMIGG G G +L LF ML + PN + ++LSAC+H
Sbjct: 546 SCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHA 605
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V E + F M + F P+ +HY CMVD+L R GRL+EA+ ++ MP + +++GA
Sbjct: 606 GLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGA 665
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L ++ +LG + +L L P+K+ ++L++N+YAS G W V +VR MK +
Sbjct: 666 LLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLV 725
Query: 666 SKSPGCSLVDL 676
K PG S ++L
Sbjct: 726 KKEPGMSWIEL 736
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 224/461 (48%), Gaps = 61/461 (13%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ K+L +D+ GM +H I+++G + LV++Y+KC+ +R++ ++ +
Sbjct: 53 YPKLLLQFTASKDVSSGMAIHARIIRLG--LLGLRNRLVNLYSKCQCFRVARKLVIDSSE 110
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
++VSW+++I+GYVQN +E L+ + M +GN+ T S++ C+ R L GK +
Sbjct: 111 PDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQI 170
Query: 269 H----------------------------------------GYILKIGIEINSHLVTALL 288
H GY++K+G + + ALL
Sbjct: 171 HRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALL 230
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY K G A +VF E+ D+VSW A+I G D ALKL P+
Sbjct: 231 DMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMF 290
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
T++S L A A +G + +GR +HS +++ +E D V L+DMY+KC ++ DAR +F+
Sbjct: 291 TLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLM 350
Query: 408 SEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVGS 450
KDVI WNSIISG + + + TL +++ + A A
Sbjct: 351 PXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCE 410
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H S K G + YV +LL+ Y KC + A VF+ ++ V +++MI Y
Sbjct: 411 QVHTISIKSG-YQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQY 469
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
G G +L ++ M + +++P+ IF+++ +AC++ +G
Sbjct: 470 GLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQG 510
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 123/251 (49%), Gaps = 3/251 (1%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
++ G + H + I G D L+ YG ++ A VF+ P D ++ MI
Sbjct: 404 QANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMI 463
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
Y L ++ ++ Y M+ R + D F+FS + AC L ++G ++H ++K G
Sbjct: 464 TAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLL 523
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D F LV+MYAKC I + +F+E + +VSW++MI G Q+ ++ L LF +M
Sbjct: 524 SDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQM 583
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI-GIEINSHLVTALLDMYVKCGN 296
+ + N ITL S+++AC + + + G + K+ GI ++D+ + G
Sbjct: 584 LKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGR 643
Query: 297 IRDARSVFDEL 307
+ +A + E+
Sbjct: 644 LDEAMVLVKEM 654
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 48/222 (21%)
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
V G ++HA + GLL L+N Y+KC + AR + E + V+WSA+I
Sbjct: 66 VSSGMAIHARIIRLGLLGLR----NRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALIS 121
Query: 506 GYGMQGDGGGSL----------------------------------------ALFSDMLN 525
GY G G +L AL ++M++
Sbjct: 122 GYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMIS 181
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ PNE +T+L+AC+ G K Y + + P + ++D+ A++G
Sbjct: 182 TGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSAN--ALLDMYAKSGCP 239
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
E A+ +P +PD+ + A + GC L+ + DL ++ KM
Sbjct: 240 EAAIAVFYEIP-KPDIVSWNAVIAGCVLHEKNDLALKLLGKM 280
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 210/637 (32%), Positives = 340/637 (53%), Gaps = 29/637 (4%)
Query: 66 KAFHAL-LIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+A HAL L G ++ L++MYG G V+ A VF++M N + S+ ++ N
Sbjct: 215 EAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSEN 274
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFV-----FSKVLKACCELRDIDEGMKVHCEIVKVGGPD 179
+ + +K R + E + V V+ AC + ++ GM VH K+G +
Sbjct: 275 GGFGECCGVFK--RLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITE 332
Query: 180 SFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM- 237
+ LVDMY+KC +G +R +FD KNVVSW ++I GY + + L M
Sbjct: 333 EVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQ 392
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
RE V N++T+ +++ AC+ L K +HGY + G + + A + Y KC ++
Sbjct: 393 REEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSL 452
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
A VF + + SW A+I + Q+G+P K+L LF + P+ TI S+L A
Sbjct: 453 DCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLAC 512
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A+L L G+ +H +R GLE D + +L+ +Y +C + + IF+ K ++ WN
Sbjct: 513 ARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWN 572
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+I+G N + P + + V+ AC+ + A+++G +H+++ K
Sbjct: 573 VMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALK- 631
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
LS + +V AL++ YAKCG + ++ +FD + EK+ W+ +I GYG+ G G ++ L
Sbjct: 632 AHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIEL 691
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M N+ +P+ F +L AC+H G+V EG K M + P ++HY C+VD+L
Sbjct: 692 FELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLG 751
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
RAG+L EAL+ + MP EPD ++ + L C Y ++GE + KK+LEL P+KA YVL
Sbjct: 752 RAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVL 811
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+SNLYA G+W V +VR+ MK+ GL K GCS +++
Sbjct: 812 LSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEI 848
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 165/591 (27%), Positives = 286/591 (48%), Gaps = 35/591 (5%)
Query: 66 KAFHALLIVD-GLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ HAL+ L ND +T++++MY + G +R VFD+ D + + ++ Y
Sbjct: 112 RKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSR 171
Query: 124 NDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSF 181
N L++D + F + + DNF V KAC + D++ G VH +K GG D+F
Sbjct: 172 NALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAF 231
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM---- 237
V L+ MY KC + S+ +VF+ ++N+VSW S++ +N E +F R+
Sbjct: 232 VGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISE 291
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
EG V + T+ +++ ACA + + G +HG K+GI + +L+DMY KCG +
Sbjct: 292 EEGLVP-DVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYL 350
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSA 356
+AR++FD ++VSW +I GY++ G +L + ++ N VT+ +VL A
Sbjct: 351 GEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPA 410
Query: 357 SAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ L + +H R G L+D V NA V YAKC + A +F K V +W
Sbjct: 411 CSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSW 470
Query: 416 NSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
N++I +D + PD T+ S++ ACA L ++ G +H + +
Sbjct: 471 NALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLR 530
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G L + ++G +L++ Y +C +++FD M K+ V W+ MI G+ +L
Sbjct: 531 NG-LELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALD 589
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
F ML+ ++P E+ T +L ACS + G K +S ++D+
Sbjct: 590 TFRQMLSGGIKPQEIAVTGVLGACSQVSALRLG-KEVHSFALKAHLSEDAFVTCALIDMY 648
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR----FDLGEVMIKK 625
A+ G +E++ + + E D +++ + G G++ +L E+M K
Sbjct: 649 AKCGCMEQSQNIFDRVN-EKDEAVWNVIIAGYGIHGHGLKAIELFELMQNK 698
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 212/417 (50%), Gaps = 26/417 (6%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
+L+AC ++I G KVH + D + T ++ MY+ C SR VFD +K
Sbjct: 98 LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF-VEGNQITLGSLVTACAKLRALHQGKWL 268
++ + ++++GY +N ++ + LF + + + TL + ACA + + G+ +
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H LK G ++ + AL+ MY KCG + A VF+ + + +LVSW +++ +++G
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277
Query: 329 DKALKLFTD---KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVI 384
+ +F + P+ T+ +V+ A A +G + MG +VH L +LG+ E+ TV
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVN 337
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------------DDNV 426
N+LVDMY+KC + +AR +F+ K+V++WN+II G ++ V
Sbjct: 338 NSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKV 397
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ VT+++V+ AC+ + +H Y+ + G L + V A + YAKC A
Sbjct: 398 RVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDEL-VANAFVAAYAKCSSLDCAE 456
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
VF M K +W+A+IG + G G SL LF M++ + P+ ++L AC+
Sbjct: 457 RVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACA 513
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 177/339 (52%), Gaps = 28/339 (8%)
Query: 232 VLFNRMREGFVEGNQIT---LGSLVTACAKLRALHQGKWLHGYI-LKIGIEINSHLVTAL 287
+L + + G V + I+ +G L+ AC + +H G+ +H + + + L T +
Sbjct: 75 LLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRI 134
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA-DFFPN 346
+ MY CG+ D+R VFD DL + A++ GY+++ A+ LF + A D P+
Sbjct: 135 IAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPD 194
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFE 405
+ T+ V A A + ++ +G VH+L ++ G D V NAL+ MY KC + A +FE
Sbjct: 195 NFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFE 254
Query: 406 TTSEKDVIAWNSIISGLDDN--------------------VSPDAVTLVSVISACASLGA 445
T +++++WNS++ +N + PD T+V+VI ACA++G
Sbjct: 255 TMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGE 314
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
V++G +H + K G ++ V V +L++ Y+KCG AR +FD KN V+W+ +I
Sbjct: 315 VRMGMVVHGLAFKLG-ITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIW 373
Query: 506 GYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACS 543
GY +GD G L +M EE V+ NEV +L ACS
Sbjct: 374 GYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 35/267 (13%)
Query: 414 AWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
A N +S D +S +A+ ++ + AC + VG +HA + L ++V + T ++
Sbjct: 80 AQNGTVSSSD--ISKEAIGIL--LRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRII 135
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQPNE 532
Y+ CG +R VFDA +EK+ ++A++ GY +++LF ++L+ ++ P+
Sbjct: 136 AMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDN 195
Query: 533 VIFTTILSACSHTGMV--GEGWKCFYSMCRDFK--FVPSMKHYVCMVDLLARAGRLEEAL 588
+ AC+ V GE F FV + ++ + + G +E A+
Sbjct: 196 FTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGN-----ALIAMYGKCGFVESAV 250
Query: 589 EFMENMPIEPDVSL---------FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
+ E M VS G F CG++ R ++I + L PD A +
Sbjct: 251 KVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKR-----LLISEEEGLVPDVATMVTV 305
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLS 666
+ A V +VR M GL+
Sbjct: 306 IPACAA-------VGEVRMGMVVHGLA 325
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 307/540 (56%), Gaps = 21/540 (3%)
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
+L+D+ ++H +I+ G ++F+ L++ Y C + ++Q+F T KNVVSWT
Sbjct: 33 KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTI 92
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
+I+G +NDC E + +F M G + N +T+ S++ A A L + K +H + ++ G
Sbjct: 93 LISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
E N + TAL+DMY K G + AR +F+ + ++V+W A++ GY+ G+ ++A+ LF
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFN 212
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ + TI S++ AS +G L +G +H IR G E D + AL+D+Y +
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLD------------------DNVSPDAVTLVSVI 437
+ DA +F S KDV AW +++G N+ D++ L+ ++
Sbjct: 273 CVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGIL 332
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
S+C+ GA+Q G +HA + K ++N++VG+A+++ YA CG+ + A+ F M EK+
Sbjct: 333 SSCSHSGALQQGRRVHALAIKT-CFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V W+AMI G GM G G ++ LF M + P+E F ++L ACSH GMV EG + FY
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
M + +P+++HY C++D+L RAG+L+ A F+ NMP +PD ++ L C ++
Sbjct: 452 MVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
LG + +K+ E+ P+ A YYVL+SN+YA G W V R ++ + + K PG S ++++
Sbjct: 512 LGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEIN 571
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 151/550 (27%), Positives = 266/550 (48%), Gaps = 42/550 (7%)
Query: 17 PKLQLRFFSYTNQQTPTQH--ELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIV 74
P + F+ + + PTQ L Q AS +L K L+ HA +I
Sbjct: 2 PPVNFNFYRHLSSN-PTQRLSPLAQPHAS-----------ILRKLKDLKPLQQIHAQIIT 49
Query: 75 DGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEF 133
GLT N + L++ Y G + A+ +F P + S+ ++I ND + + ++
Sbjct: 50 SGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDV 109
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
++ M + + S VL A L I VHC V+ G + FV T LVDMY+K
Sbjct: 110 FREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSK 169
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
+G +RQ+F+ ++NVV+W ++++GY + ++E + LFN MR + + T+ SL
Sbjct: 170 FGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSL 229
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
+ A + L G +HG+I++ G E + H+ TAL+D+YV + DA VF E+ D+
Sbjct: 230 IPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDV 289
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+WT M+ G++ + D+A+K F + + + + +LS+ + G L GR VH+
Sbjct: 290 AAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHA 349
Query: 372 LGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----- 425
L I+ + + +A++DMYA C + DA+ F EKDV+ WN++I+G N
Sbjct: 350 LAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTD 409
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
+ PD T VSV+ AC+ G V G + + K + N+ ++
Sbjct: 410 AIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVI 469
Query: 474 NFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE--EVQP 530
+ + G +A + M + + +S ++G + G+ + L ++ + E++P
Sbjct: 470 DILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGN----IKLGHEISQKIFEMEP 525
Query: 531 NEVIFTTILS 540
N+ + +LS
Sbjct: 526 NDAGYYVLLS 535
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 200/457 (43%), Gaps = 36/457 (7%)
Query: 47 LPSIPCLNLLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDS 105
LP+ L L+ + KS H + G N T LV MY FG + AR +F+S
Sbjct: 129 LPAFANLGLIRIAKSV------HCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFES 182
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M + ++ ++ Y + ++ ++ + MR++ D + ++ A + + G
Sbjct: 183 MSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H I++ G D + T L+D+Y + + +VF E K+V +WT M+ G+
Sbjct: 243 TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSG 302
Query: 225 DCAQEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ FN+M ++ + I L ++++C+ AL QG+ +H +K N +
Sbjct: 303 RHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFV 362
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
+A++DMY CGN+ DA+ F + D+V W AMI G +GY A+ LF K +
Sbjct: 363 GSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGL 422
Query: 344 FPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIA 398
P+ T SVL A + G + G MV + + L+ Y + +D+ + +
Sbjct: 423 DPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACV---IDILGRAGQL- 478
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
DA Y F PD +++ AC G +++G + +
Sbjct: 479 DAAYSFINNMP----------------FQPDFDVYSTLLGACRIHGNIKLGHEISQKIFE 522
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ YV L N YA G+ + +M ++R K
Sbjct: 523 MEPNDAGYYV--LLSNMYALAGNWEGVKMTRASLRSK 557
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 200/566 (35%), Positives = 320/566 (56%), Gaps = 23/566 (4%)
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDM 189
+E Y M + D+ F VLKAC + ++ +G +VH +VK+G D FV L+
Sbjct: 26 LEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSF 85
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA-QEGLVLFNRMREGFVEGNQIT 248
Y C + + +VFDE +K++VSW +MI + N ++ L +F M + ++ N IT
Sbjct: 86 YGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSIT 145
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
+ S + +L G+ +HG +++G+E + + +L+DMY K G+ +A +VF +L
Sbjct: 146 ISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLD 205
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
+ ++VSW AMI + Q+ + A+ L + PN VT +VL A A++G + G+
Sbjct: 206 AKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKE 265
Query: 369 VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-- 425
+H+ I +G D V NAL DMYAK + AR +F+T S +D +++N +I G
Sbjct: 266 IHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT-SLRDEVSYNILIVGHSQTSD 324
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
+ D V+ + +SACA+L A++ G +H + ++ L +++V
Sbjct: 325 CSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRK-LFHIHLFVAN 383
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
+LL+FY KCG AR +FD M K+ +W+ MI GYGM G+ ++ LF +M ++V+
Sbjct: 384 SLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEY 443
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
+ V F +LSACSH G++ +G K F + + P+ HY CMVDLL RAG +EEA E
Sbjct: 444 DSVSFIAVLSACSHGGLLEKGRKYFDEL-KARGIEPTQMHYACMVDLLGRAGLMEEAAEL 502
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
++ +PI PD +++GA L C +Y +L + + EL P+ + YY L+SN+YA GRW
Sbjct: 503 IKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRW 562
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDL 676
N++RELMK RG+ KSPGCS V +
Sbjct: 563 DEANRIRELMKSRGVKKSPGCSWVQI 588
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 244/497 (49%), Gaps = 26/497 (5%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H ++ G +D L+S YG+ G ++ A VFD MP D S+ MI + +N
Sbjct: 61 REVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVN 120
Query: 125 DL-YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
Y+D ++ ++ M + ++ S L EL G +VH +++G D F+
Sbjct: 121 GWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFI 180
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
L+DMYAK + VF + KNVVSW +MIA + QN + L +M++
Sbjct: 181 ANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGE 240
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N +T +++ ACA++ + GK +H + +G + + AL DMY K G+++ AR+
Sbjct: 241 LPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARN 300
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VFD D VS+ +IVG++Q+ ++L LF++ + ++V+ LSA A L
Sbjct: 301 VFDTSLR-DEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTA 359
Query: 363 LNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+ G+ +H +R + V N+L+D Y KC I AR IF+ + KDV +WN++I G
Sbjct: 360 IKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILG 419
Query: 422 ------LD-----------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
LD D+V D+V+ ++V+SAC+ G ++ G +G+ +
Sbjct: 420 YGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPT 479
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
++ +++ + G + A + + + W A++G + G+ LA ++
Sbjct: 480 QMHY-ACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGN--LELAAWAAE 536
Query: 524 LNEEVQPNEVIFTTILS 540
E++P + T+LS
Sbjct: 537 HLFELKPEHSGYYTLLS 553
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 213/432 (49%), Gaps = 24/432 (5%)
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W ++I GY GL ++N+M V + T ++ ACA + +G+ +HG ++
Sbjct: 10 WNTLIRGYSIAGVGG-GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK-AL 332
K+G E + + LL Y CG +RDA VFDE+ DLVSW MI ++ +G+ + AL
Sbjct: 69 KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMY 391
+F PN +TI+S L +L GR VH IR+GLE D + N+L+DMY
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMY 188
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS-----------------PDAVTLV 434
AK +A +F K+V++WN++I+ N P++VT
Sbjct: 189 AKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFT 248
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
+V+ ACA +G V+ G +HA S G + +++V AL + YAK G + AR VFD
Sbjct: 249 NVLPACARMGLVRPGKEIHARSIHMG-CAFDLFVSNALTDMYAKSGHLKLARNVFDT-SL 306
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
++ V+++ +I G+ D SL+LFS+M ++ + V F LSAC++ + +G +
Sbjct: 307 RDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEI 366
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYS 614
+ R F + ++D + GR+ A + M DV+ + + G G+
Sbjct: 367 HGFLLRKL-FHIHLFVANSLLDFYTKCGRIGLARNIFDRM-TNKDVASWNTMILGYGMLG 424
Query: 615 RFDLGEVMIKKM 626
D + + M
Sbjct: 425 ELDTAIDLFENM 436
>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 203/628 (32%), Positives = 331/628 (52%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L I G ND + LV MY + A +F MP + + +I Y ND +
Sbjct: 161 HCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRF 220
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ ++ +K M K ++ V ++C L G ++H +K DS + T
Sbjct: 221 IEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTAT 280
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMYAKC + + +VF+ + S+ ++I GY + D + L +F ++ ++ ++
Sbjct: 281 LDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDE 340
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
I+L +TAC+ ++ +G LHG +K G+ N + +LDMY KCG + +A ++FD+
Sbjct: 341 ISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDD 400
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I + Q+ K L LF + P+ T SV+ A A LN G
Sbjct: 401 MERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG 460
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+H ++ G+ D+ V +ALVDMY KC ++ +A I + EK ++WNSIISG
Sbjct: 461 MEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQ 520
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
L+ V PD T +V+ CA++ +++G +HA K L S+VY+
Sbjct: 521 KQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNL-HSDVYI 579
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+ L++ Y+KCG+ Q +R++F+ +++ VTWSAMI Y G G ++ LF +M V
Sbjct: 580 ASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNV 639
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN IF ++L AC+H G V +G F M + P M+HY CMVDLL R+ ++ EAL
Sbjct: 640 KPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEAL 699
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+ +E+M E D ++ L C + ++ E +L+L P + YVL++N+YA+ G
Sbjct: 700 KLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVG 759
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
W V ++R +MK L K PGCS +++
Sbjct: 760 MWGEVAKIRSIMKNCKLKKEPGCSWIEV 787
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 187/627 (29%), Positives = 306/627 (48%), Gaps = 60/627 (9%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G++ +A+S+FD+MP D S+ ++ Y N + + +E + MR HD F
Sbjct: 82 YAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATF 141
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLD 208
S VLKAC + D G++VHC +++G + V + LVDMY+KC+ + + ++F E +
Sbjct: 142 SVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPE 201
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+N+V W+++IAGYVQND EGL LF M + + +Q T S+ +CA L A G L
Sbjct: 202 RNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQL 261
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
HG+ LK +S + TA LDMY KC + DA VF+ L + S+ A+IVGY +
Sbjct: 262 HGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQG 321
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINAL 387
KAL++F + + ++++ L+A + + G +H L ++ GL + V N +
Sbjct: 322 LKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTI 381
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDA 430
+DMY KC + +A IF+ +D ++WN+II+ + N + PD
Sbjct: 382 LDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDD 441
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
T SV+ ACA A+ G +H K G + + +VG+AL++ Y KCG A + D
Sbjct: 442 FTYGSVVKACAGQQALNYGMEIHGRIVKSG-MGLDWFVGSALVDMYGKCGMLMEAEKIHD 500
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
+ EK TV+W+++I G+ Q + FS ML V P+ + T+L C++ +
Sbjct: 501 RLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIEL 560
Query: 551 GWKC---------------------FYSMCRD-------FKFVPSMKH--YVCMVDLLAR 580
G + YS C + F+ P + + M+ A
Sbjct: 561 GKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAY 620
Query: 581 AGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE---LHPDKA 634
G E+A++ E M ++P+ ++F + L C D G + M L P
Sbjct: 621 HGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHME 680
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMK 661
Y +V L GR +VN+ +L++
Sbjct: 681 HYSCMVDLL----GRSDQVNEALKLIE 703
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 142/547 (25%), Positives = 245/547 (44%), Gaps = 65/547 (11%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCE-IVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
F FS +L+ C L+ ++ G + H + IV P +V LV Y K ++ + +VFD
Sbjct: 7 FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66
Query: 206 TLDKNVVSWTSMIAGYVQ-------------------------------NDCAQEGLVLF 234
++V+SW +MI GY + N ++ + +F
Sbjct: 67 MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
RMR + + T ++ AC+ + G +H +++G E + +AL+DMY KC
Sbjct: 127 VRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+ A +F E+ +LV W+A+I GY Q+ + LKLF D + T ASV
Sbjct: 187 KKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
+ A L +G +H ++ D + A +DMYAKC ++DA +F T
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQ 306
Query: 414 AWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
++N+II G +S D ++L ++AC+ + G LH +
Sbjct: 307 SYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLA 366
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K G L N+ V +L+ Y KCG A +FD M ++ V+W+A+I + + +
Sbjct: 367 VKCG-LGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKT 425
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACS-----HTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
L+LF ML ++P++ + +++ AC+ + GM G M D+ FV S
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDW-FVGS---- 480
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH- 630
+VD+ + G L EA + + + + VS + + + G + + + +MLE+
Sbjct: 481 -ALVDMYGKCGMLMEAEKIHDRLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQMLEMGV 538
Query: 631 -PDKACY 636
PD Y
Sbjct: 539 IPDNFTY 545
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 157/347 (45%), Gaps = 50/347 (14%)
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T ++ C+ L+AL+ GK H ++ ++ L+ Y K N+ A VFD
Sbjct: 6 KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65
Query: 306 ELCSIDLVSWTAMIVGYTQ-------------------------------SGYPDKALKL 334
+ D++SW MI GY + +G K++++
Sbjct: 66 RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAK 393
F + ++ T + VL A + + + +G VH L I++G E+ V +ALVDMY+K
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSV 436
C + A IF E++++ W+++I+G N + T SV
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+CA L A ++G+ LH ++ K ++ +GTA L+ YAKC A VF+ +
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSI-IGTATLDMYAKCDRMSDAWKVFNTLPNPP 304
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+++A+I GY Q G +L +F + + +E+ + L+ACS
Sbjct: 305 RQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACS 351
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 308/549 (56%), Gaps = 28/549 (5%)
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVF-DETLDKN 210
L+A +++ +G ++H ++ G +S +T L++MY+KC + + +F D T + N
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
V ++ ++I+G++ N +EG + +MR V ++ T + AC + + K +HG
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHG 160
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+ K G+E++ + +AL++ Y+K G + A+ F+EL D+V W AM+ GY Q G +
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVD 389
L+ F P+ T+ VLS A +G+LN GR++H +++G + V N+L+D
Sbjct: 221 VLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIIS-----------------GLDDNVSPDAVT 432
MY KC I DA IFE EKD+ +WNSI+S L + PD VT
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVT 340
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSS-----NVYVGTALLNFYAKCGDAQSARM 487
+ +V+ AC+ L A+ G +H Y GL +V + A+++ YAKCG + A +
Sbjct: 341 VTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHL 400
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF+ M K+ +W+ MI GYGM G G +L +FS M +++P+EV F +LSACSH G
Sbjct: 401 VFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGF 460
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V +G M + P+++HY C++D+L RAG+L+EA E MPIE + ++ A L
Sbjct: 461 VSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C L+ L EV +++ EL P+ YVL+SN+Y + GR+ V +VR M+Q+ + K
Sbjct: 521 AACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRK 580
Query: 668 SPGCSLVDL 676
+PGCS ++L
Sbjct: 581 TPGCSWIEL 589
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 244/513 (47%), Gaps = 37/513 (7%)
Query: 23 FFSYTNQQTPTQHELDQTFASFHSLPS-IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK 81
FF++++ T Q +F ++L + I L K+ K H+ ++++G N
Sbjct: 18 FFNFSSISTAIQ-----SFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSP 72
Query: 82 CN-TKLVSMYGSFGHVKYARSVF-DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
+ T L++MY + +A S+F D + ++F +I + N ++ EFY+ MR
Sbjct: 73 LSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRN 132
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGS 198
D F F +KAC ++ +I K+H + K G D F+ + LV+ Y K +
Sbjct: 133 EGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEH 189
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
++ F+E ++VV W +M+ GY Q + L F RM + V ++ T+ +++ A
Sbjct: 190 AQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAV 249
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ L+ G+ +HG+ +K+G + + +L+DMY KC I DA +F+ + D+ SW ++
Sbjct: 250 MGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSI 309
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
+ + Q G D L+L A P+ VT+ +VL A + L L GR +H I GL
Sbjct: 310 VSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGL 369
Query: 379 -------EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
+D + NA++DMYAKC + DA +FE S KDV +WN +I G
Sbjct: 370 GKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEA 429
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+ + PD VT V V+SAC+ G V G + + ++ + T +++
Sbjct: 430 LEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVID 489
Query: 475 FYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGG 506
+ G A + E N V W A++
Sbjct: 490 MLGRAGQLDEAYELALTMPIEANPVVWRALLAA 522
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 37/436 (8%)
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL-VTALLDMYVKCGNIRDARSV 303
N T + + A A + L +GK +H Y+L G +NS L +T+L++MY KC + A S+
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGF-LNSPLSITSLINMYSKCNQMNFALSI 94
Query: 304 F-DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F D I++ ++ A+I G+ +G+P++ + + + P+ T + A +
Sbjct: 95 FSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLE 154
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+ + +H L + GLE D + +ALV+ Y K ++ A+ FE +DV+ WN++++G
Sbjct: 155 I---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNG 211
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
D++V P T+ V+S A +G + G +H ++ K G S
Sbjct: 212 YAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMG-YDS 270
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V V +L++ Y KC + A +F+ MREK+ +W++++ + GD G+L L ML
Sbjct: 271 GVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRML 330
Query: 525 NEEVQPNEVIFTTILSACSHT-----GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
+QP+ V TT+L ACSH G G+ + +D K + + ++D+ A
Sbjct: 331 GAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYA 390
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYY 637
+ G + +A E M DV+ + + G G++ + M +M E L PD+ +
Sbjct: 391 KCGSMRDAHLVFERMS-NKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFV 449
Query: 638 VLVSNL----YASDGR 649
++S + S GR
Sbjct: 450 GVLSACSHAGFVSQGR 465
>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 355 bits (911), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 216/696 (31%), Positives = 368/696 (52%), Gaps = 35/696 (5%)
Query: 13 RTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCL-------NLLGLCKSTGSL 65
RT ++F+ + + Q ++F S+ + L +LL C S L
Sbjct: 3 RTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRL 62
Query: 66 K---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
+ H ++V+G ++D ++ LV++Y FG + +AR VF+ M D + MI Y
Sbjct: 63 SFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCY 122
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
+ + MR + + ++L E+ + +H V G D
Sbjct: 123 SRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDI 179
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
V+ ++++Y KC +G ++ +FD+ +++VSW +MI+GY E L L RMR
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+ +Q T G+ ++ + L G+ LH I+K G +++ HL TAL+ MY+KCG +
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
V + + + D+V WT MI G + G +KAL +F++ + + IASV+++ AQL
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
G+ ++G VH +R G D +N+L+ MYAKC + + IFE +E+D+++WN+II
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 420 SGLDDNV------------------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
SG NV D+ T+VS++ AC+S GA+ VG +H + +
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI 479
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
++ V TAL++ Y+KCG ++A+ FD++ K+ V+W +I GYG G G +L ++S
Sbjct: 480 RPCSL-VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYS 538
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+ L+ ++PN VIF +LS+CSH GMV +G K F SM RDF P+ +H C+VDLL RA
Sbjct: 539 EFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRA 598
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
R+E+A +F + P + + G L C + ++ +++ + M+EL P A +YV +
Sbjct: 599 KRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLG 658
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ +A+ RW V++ M+ GL K PG S ++++
Sbjct: 659 HSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMN 694
>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 601
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 320/583 (54%), Gaps = 22/583 (3%)
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
Y + + IR + +E Y MR +NF F +LKAC L I +G +H
Sbjct: 18 LYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHA 77
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
++ VG D FV T LVDMY+K ++ +SRQVFDET ++V+SW SMIA Y ++ E
Sbjct: 78 HLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNE 137
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLR--ALHQGKWLHGYILKIGIEINSHLVTAL 287
L LF M G E N T SL++ A +L QG+ LHG + K + ++ + +L
Sbjct: 138 ALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSL 197
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MYV G I A SVF + ++SWT M+ GY ++G K + F+ + + +
Sbjct: 198 VQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDK 257
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINAL-VDMYAKCHVIADARYIFET 406
++S+ QLGNL +G +HSL ++ GL+ I L + MY+KC + AR +F+
Sbjct: 258 FVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDL 317
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
SEK + +W S+ISG +NV P+ L + ISACA LG++ +
Sbjct: 318 LSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMR 377
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+ A+ + GL +S+ V T+L++ Y K G + A VF++M ++ WS+M+ GY +
Sbjct: 378 REIEAFIQQDGL-ASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAV 436
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G ++ LF +M ++P+ ++ +IL ACSH+G+V +G + F +M D+ VP+M
Sbjct: 437 HGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMV 496
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY C+VD+L+RAG LE AL ++ MP + + FL C Y +LGEV + +L
Sbjct: 497 HYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSS 556
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+P +VL++NLY S G+W +VR L+ +GL K PGCS
Sbjct: 557 NPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCS 599
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/420 (29%), Positives = 199/420 (47%), Gaps = 26/420 (6%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
C NL S G HA LI G +D T LV MY F +++ +R VFD
Sbjct: 63 CANL----ASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRS 118
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR--DIDEGMKV 168
S+ MI Y + + ++ ++ M E ++ F +L + + +G +
Sbjct: 119 VISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLL 178
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H + K D+ V LV MY I S+ VF +K V+SWT M+ GY++
Sbjct: 179 HGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAV 238
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ F++MR+ V ++ ++++C +L L G LH +LK G++ + L
Sbjct: 239 AKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLL 298
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MY KCG++ AR+VFD L + SWT+MI GY +GYP +AL LF+ + PN
Sbjct: 299 ISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNG 358
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFET 406
+A+ +SA A LG+L+M R + + + GL D V +L+ +Y K I A +F +
Sbjct: 359 AMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNS 418
Query: 407 TSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
+D+ AW+S+++G + PD S++ AC+ G V+ G
Sbjct: 419 MIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDG 478
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 174/344 (50%), Gaps = 12/344 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV MY +FG + A SVF ++ S+ +M+ Y + E + MR+ D
Sbjct: 197 LVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLD 256
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
FVF ++ +C +L ++ G +H ++K G + + L+ MY+KC D+ S+R VFD
Sbjct: 257 KFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFD 316
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+K++ SWTSMI+GY +E L LF+ + V N L + ++ACA L +L
Sbjct: 317 LLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSM 376
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ + +I + G+ +S + T+L+ +Y K G+I A VF+ + DL +W++M+ GY
Sbjct: 377 RREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAV 436
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
G +K + LF + + + P+ AS+L A + G + G + H ++L DY ++
Sbjct: 437 HGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDG-LEHFKNMQL---DYGIV 492
Query: 385 ------NALVDMYAKC-HVIADARYIFETTSEKDVIAWNSIISG 421
LVD+ ++ H+ I E ++ AW +S
Sbjct: 493 PTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSA 536
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 104/230 (45%), Gaps = 2/230 (0%)
Query: 80 DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
D L+SMY G + AR+VFD + YS+ MI Y ++ + + +
Sbjct: 292 DPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQ 351
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
+ + + + AC +L + ++ I + G DS V T L+ +Y K I
Sbjct: 352 NNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEK 411
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+ +VF+ + +++ +W+SM+ GY + ++ + LF+ M+ ++ + S++ AC+
Sbjct: 412 AEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSH 471
Query: 259 LRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
+ G + L GI T L+D+ + G++ A + E+
Sbjct: 472 SGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEM 521
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Query: 59 CKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C GSL + A + DGL +D + +T L+ +Y FG ++ A VF+SM + D ++
Sbjct: 368 CADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAW 427
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
M+ Y ++ + + + + M++ + D V++ +L AC +++G++
Sbjct: 428 SSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 199/555 (35%), Positives = 307/555 (55%), Gaps = 33/555 (5%)
Query: 153 LKACCELRDIDEGMKVHCEIVK---VGGPDSFVLTGLVDMYAKCRDIGSSRQVFD--ETL 207
L++C ++ +G ++H ++K G P +T L++MY+KC I S +VF+
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSP--LAITSLINMYSKCSLIDHSLRVFNFPTHH 93
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+KNV ++ ++IAG++ N Q L L+N+MR + ++ T ++ AC
Sbjct: 94 NKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTK 153
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG + K+G+E++ + +AL++ Y+K + +A VF+EL D+V W AM+ G+ Q G
Sbjct: 154 IHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGR 213
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NA 386
++AL +F P T+ VLS + +G+ + GR VH ++G E V+ NA
Sbjct: 214 FEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNA 273
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD------------------DNVSP 428
L+DMY KC + DA +FE E D+ +WNSI+S + V P
Sbjct: 274 LIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQP 333
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS-------NVYVGTALLNFYAKCGD 481
D VT+ +V+ AC L A+ G +H Y GL +V + AL++ YAKCG+
Sbjct: 334 DLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGN 393
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ ARMVF MREK+ +W+ MI GYGM G GG +L +FS M ++ PNE+ F +LSA
Sbjct: 394 MRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSA 453
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH GMV EG M + PS++HY C++D+L RAG+L EA + + MP + D
Sbjct: 454 CSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPV 513
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
+ + L C L++ DL EV K++EL PD YVL+SN+Y GR+ V + R MK
Sbjct: 514 GWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMK 573
Query: 662 QRGLSKSPGCSLVDL 676
Q+ + K PGCS ++L
Sbjct: 574 QQNVKKRPGCSWIEL 588
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 143/519 (27%), Positives = 244/519 (47%), Gaps = 43/519 (8%)
Query: 32 PTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCN-TKLV 87
P QH S + L + C+ L C +L K H L+ + T L+
Sbjct: 14 PQQHHHHCRGFSTYDLGT--CIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLI 71
Query: 88 SMYGSFGHVKYARSVFD--SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+MY + ++ VF+ + N + +++ +I + N L + + Y MR D
Sbjct: 72 NMYSKCSLIDHSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPD 131
Query: 146 NFVFSKVLKACCELRDIDEGM---KVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
F F V++AC D D+G K+H + KVG D FV + LV+ Y K R +G + +
Sbjct: 132 KFTFPCVIRAC---GDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYR 188
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF+E ++VV W +M+ G+ Q +E L +F RM V + T+ +++ + +
Sbjct: 189 VFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGD 248
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
G+ +HG++ K+G E + AL+DMY KC + DA SVF+ + ID+ SW +++
Sbjct: 249 FDNGRAVHGFVTKMGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSV 308
Query: 322 YTQSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-- 378
+ + G L+LF + P+ VT+ +VL A L L GR +H + GL
Sbjct: 309 HERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAK 368
Query: 379 -------EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
+D + NAL+DMYAKC + DAR +F EKDV +WN +I+G
Sbjct: 369 EESHDVFDDVLLNNALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEA 428
Query: 422 LD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
LD + P+ ++ V ++SAC+ G V+ G + + +S ++ T +++
Sbjct: 429 LDIFSRMCQAQMVPNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVID 488
Query: 475 FYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
+ G A +V + + V W +++ + D
Sbjct: 489 MLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAACRLHND 527
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 190/404 (47%), Gaps = 32/404 (7%)
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
GF + T + + +CA L +GK LH ++LK + +T+L++MY KC I
Sbjct: 22 RGFSTYDLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLID 81
Query: 299 DARSVFD--ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ VF+ + ++ ++ A+I G+ + P +AL L+ + P+ T V+ A
Sbjct: 82 HSLRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRA 141
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ + +H L ++GLE D V +ALV+ Y K + +A +FE +DV+ W
Sbjct: 142 CGDDDDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLW 201
Query: 416 NSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
N++++G + V P T+ V+S + +G G ++H + TK
Sbjct: 202 NAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTK 261
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G S V V AL++ Y KC A VF+ M E + +W++++ + GD G+L
Sbjct: 262 MG-YESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLR 320
Query: 519 LFSDML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV----- 572
LF M+ + VQP+ V TT+L AC+H + G + M + H V
Sbjct: 321 LFDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVN-GLAKEESHDVFDDVL 379
Query: 573 ---CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
++D+ A+ G + +A NM E DV+ + + G G++
Sbjct: 380 LNNALMDMYAKCGNMRDARMVFVNMR-EKDVASWNIMITGYGMH 422
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 214/641 (33%), Positives = 341/641 (53%), Gaps = 39/641 (6%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H ++I GL D LV MYG G V A VFD MP + S+ MI + N
Sbjct: 166 EVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSEN 225
Query: 125 DLYKDIVEFYKCMRKRLKEH----DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPD 179
+D + + + L E D +L C ++D GM +H VK+G +
Sbjct: 226 GFSRD---SFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEE 282
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
V +V MY+KC + ++ F + +KNVVSW +MI+ + E FN ++E
Sbjct: 283 VMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEA---FNLLQE 339
Query: 240 GFVEG-----NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
++G N++T+ +++ AC L K LHGY + + + L A + Y KC
Sbjct: 340 MQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKC 398
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G + A VF + + SW A+I G+ Q+G P KAL L ++ P+ TI+S+L
Sbjct: 399 GALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLL 458
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
A A L +L G+ +H +R GLE D+ V +L+ Y C + AR +F+ +K+++
Sbjct: 459 LACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLV 518
Query: 414 AWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
+WN++ISG L + + + +VSV AC+ L A+++G H Y
Sbjct: 519 SWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYV 578
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K L + + +VG ++++ YAK G + +R VFD +++KN +W+A+I +G+ G G +
Sbjct: 579 LK-ALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEA 637
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV-PSMKHYVCMV 575
+ L+ M P+ + IL AC H G+V EG K F M ++F + P ++HY C++
Sbjct: 638 IELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEM-QNFNLIEPKLEHYACLI 696
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
D+LARAGRL++AL + MP E D ++ + L C + ++GE + KK+LEL PDKA
Sbjct: 697 DMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAE 756
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YVL+SNLYA G+W V +VR++MK+ GL K GCS +++
Sbjct: 757 NYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEV 797
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 173/583 (29%), Positives = 296/583 (50%), Gaps = 37/583 (6%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRL 141
NT+L+ MY G +R VFD+M + + ++ Y N LY D+V+ F +
Sbjct: 82 NTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTD 141
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSR 200
+ DNF F V+KAC + D+ G +H ++K+G D FV LV MY KC + +
Sbjct: 142 FQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAM 201
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFVEGNQITLGSLVTACAK 258
+VFD + N+VSW SMI + +N +++ L M EG + + +T+ +++ CA
Sbjct: 202 KVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLP-DVVTVVTILPVCAG 260
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ G +HG +K+G+ + A++ MY KCG + +A+ F + + ++VSW M
Sbjct: 261 EGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTM 320
Query: 319 IVGYTQSGYPDKALKLFTDK--KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
I ++ G ++A L + + + N VTI +VL A L + +H R
Sbjct: 321 ISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRH 380
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------- 425
+ + NA + YAKC + A +F +K V +WN++I G N
Sbjct: 381 CFQHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLF 440
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
PD T+ S++ ACA L ++Q G +H Y + G L ++ +VGT+LL+ Y C
Sbjct: 441 QMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNG-LETDFFVGTSLLSHYIHC 499
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G A SAR++FD M++KN V+W+AMI GY G SLALF L+E +Q +E+ ++
Sbjct: 500 GKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVF 559
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIE 597
ACS + G + + K + + +V ++D+ A++G ++E+ + + + +
Sbjct: 560 GACSQLSALRLGKEAHGYV---LKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLK-D 615
Query: 598 PDVSLFGAFLHGCGLYSR----FDLGEVMIKKMLELHPDKACY 636
+V+ + A + G++ +L E M KK+ ++ PD+ Y
Sbjct: 616 KNVASWNAIIVAHGIHGHGKEAIELYERM-KKVGQM-PDRFTY 656
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 220/417 (52%), Gaps = 26/417 (6%)
Query: 152 VLKACCELRDIDEGMKVHCEIV-KVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDK 209
+L+AC +DI+ G ++H + + +VL T L+ MYA C SR VFD K
Sbjct: 49 LLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETK 108
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
N++ W ++++GY +N + + +F + + + + + T S++ AC + + G+ +
Sbjct: 109 NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVI 168
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
HG ++K+G+ ++ + AL+ MY KCG + +A VFD + +LVSW +MI ++++G+
Sbjct: 169 HGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFS 228
Query: 329 DKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINA 386
+ L + + P+ VT+ ++L A G +++G +H L ++LGL E+ V NA
Sbjct: 229 RDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNA 288
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-------------------DNVS 427
+V MY+KC + +A+ F + K+V++WN++IS + +
Sbjct: 289 MVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMK 348
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
+ VT+++V+ AC ++ LH YS + +V + A + YAKCG SA
Sbjct: 349 ANEVTILNVLPACLDKLQLRSLKELHGYSFRHCF--QHVELSNAFILAYAKCGALNSAEK 406
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
VF + +K +W+A+IGG+ GD +L L M QP+ +++L AC+H
Sbjct: 407 VFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAH 463
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 189/549 (34%), Positives = 308/549 (56%), Gaps = 28/549 (5%)
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVF-DETLDKN 210
L+A +++ +G ++H ++ G +S +T L++MY+KC + + +F D T + N
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
V ++ ++I+G++ N +EG + +MR V ++ T + AC + + K +HG
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHG 160
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+ K G+E++ + +AL++ Y+K G + A+ F+EL D+V W AM+ GY Q G +
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVD 389
L+ F P+ T+ VLS A +G+LN GR++H +++G + V N+L+D
Sbjct: 221 VLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIIS-----------------GLDDNVSPDAVT 432
MY KC I DA IFE EKD+ +WNSI+S L + PD VT
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVT 340
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSS-----NVYVGTALLNFYAKCGDAQSARM 487
+ +V+ AC+ L A+ G +H Y GL +V + A+++ YAKCG + A +
Sbjct: 341 VTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHL 400
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF+ M K+ +W+ MI GYGM G G +L +FS M +++P+EV F +LSACSH G
Sbjct: 401 VFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGF 460
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V +G M + P+++HY C++D+L RAG+L+EA E MPIE + ++ A L
Sbjct: 461 VSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C L+ L EV +++ EL P+ YVL+SN+Y + GR+ V +VR M+Q+ + K
Sbjct: 521 AACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRK 580
Query: 668 SPGCSLVDL 676
+PGCS ++L
Sbjct: 581 TPGCSWIEL 589
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 244/513 (47%), Gaps = 37/513 (7%)
Query: 23 FFSYTNQQTPTQHELDQTFASFHSLPS-IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK 81
FF++++ T Q +F ++L + I L K+ K H+ ++++G N
Sbjct: 18 FFNFSSISTAIQ-----SFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSP 72
Query: 82 CN-TKLVSMYGSFGHVKYARSVF-DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
+ T L++MY + +A S+F D + ++F +I + N ++ EFY+ MR
Sbjct: 73 LSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRN 132
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGS 198
D F F +KAC ++ +I K+H + K G D F+ + LV+ Y K +
Sbjct: 133 EGVIPDKFTFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEH 189
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
++ F+E ++VV W +M+ GY Q + L F RM + V ++ T+ +++ A
Sbjct: 190 AQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAV 249
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ L+ G+ +HG+ +K+G + + +L+DMY KC I DA +F+ + D+ SW ++
Sbjct: 250 MGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSI 309
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
+ + Q G D L+L A P+ VT+ +VL A + L L GR +H I GL
Sbjct: 310 VSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGL 369
Query: 379 -------EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
+D + NA++DMYAKC + DA +FE S KDV +WN +I G
Sbjct: 370 GKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEA 429
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+ + PD VT V V+SAC+ G V G + + ++ + T +++
Sbjct: 430 LEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVID 489
Query: 475 FYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGG 506
+ G A + E N V W A++
Sbjct: 490 MLGRAGQLDEAYELALTMPIEANPVVWRALLAA 522
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 213/436 (48%), Gaps = 37/436 (8%)
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL-VTALLDMYVKCGNIRDARSV 303
N T + + A A + L +GK +H Y+L G +NS L +T+L++MY KC + A S+
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGF-LNSPLSITSLINMYSKCNQMNFALSI 94
Query: 304 F-DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F D I++ ++ A+I G+ +G+P++ + + + P+ T + A +
Sbjct: 95 FSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACLDVLE 154
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+ + +H L + GLE D + +ALV+ Y K ++ A+ FE +DV+ WN++++G
Sbjct: 155 I---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNG 211
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
D++V P T+ V+S A +G + G +H ++ K G S
Sbjct: 212 YAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMG-YDS 270
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V V +L++ Y KC + A +F+ MREK+ +W++++ + GD G+L L ML
Sbjct: 271 GVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRML 330
Query: 525 NEEVQPNEVIFTTILSACSHT-----GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
+QP+ V TT+L ACSH G G+ + +D K + + ++D+ A
Sbjct: 331 GAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYA 390
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYY 637
+ G + +A E M DV+ + + G G++ + M +M E L PD+ +
Sbjct: 391 KCGSMRDAHLVFERMS-NKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFV 449
Query: 638 VLVSNL----YASDGR 649
++S + S GR
Sbjct: 450 GVLSACSHAGFVSQGR 465
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 206/628 (32%), Positives = 329/628 (52%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L I G ND + LV MY + A VF MP + + +I Y ND +
Sbjct: 161 HCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRF 220
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ ++ +K M K ++ V ++C L G ++H +K DS + T
Sbjct: 221 IEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTAT 280
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMYAKC + + +VF+ + S+ ++I GY + D + L +F ++ + ++
Sbjct: 281 LDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDE 340
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
I+L +TAC+ ++ +G LHG +K G+ N + +LDMY KCG + +A +F+E
Sbjct: 341 ISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEE 400
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I + Q+ K L LF + P+ T SV+ A A LN G
Sbjct: 401 MERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG 460
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+H I+ G+ D+ V +ALVDMY KC ++ +A I EK ++WNSIISG
Sbjct: 461 TEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQ 520
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
L+ + PD T +V+ CA++ +++G +HA K L S+VY+
Sbjct: 521 KQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQL-HSDVYI 579
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+ L++ Y+KCG+ Q +R++F+ +++ VTWSAMI Y G G ++ LF +M V
Sbjct: 580 ASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNV 639
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN IF ++L AC+H G V +G F M + P M+HY CMVDLL R+G++ EAL
Sbjct: 640 KPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEAL 699
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+ +E+MP E D ++ L C + ++ E +L+L P + YVL++N+YA G
Sbjct: 700 KLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVG 759
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
W V ++R +MK L K PGCS +++
Sbjct: 760 MWGEVAKMRSIMKNCKLKKEPGCSWIEV 787
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 189/631 (29%), Positives = 309/631 (48%), Gaps = 60/631 (9%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ Y G++ +A+S+FDSMP D S+ ++ Y N + + +E + MR HD
Sbjct: 78 LIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHD 137
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFD 204
F+ +LKAC + D G++VHC +++G + V + LVDMY+KC+ + + +VF
Sbjct: 138 YATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFR 197
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E ++N+V W+++IAGYVQND EGL LF M + + +Q T S+ +CA L A
Sbjct: 198 EMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKL 257
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G LHG+ LK +S + TA LDMY KC + DA VF+ L + S+ A+IVGY +
Sbjct: 258 GTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYAR 317
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
KAL +F + + + ++++ L+A + + G +H L ++ GL + V
Sbjct: 318 QDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICV 377
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
N ++DMY KC + +A IFE +D ++WN+II+ + N +
Sbjct: 378 ANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTM 437
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T SV+ ACA A+ G+ +H K G + + +VG+AL++ Y KCG A
Sbjct: 438 EPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSG-MGLDWFVGSALVDMYGKCGMLMEAE 496
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+ + EK TV+W+++I G+ Q + FS ML + P+ + T+L C++
Sbjct: 497 KIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMA 556
Query: 547 MVGEGWKC---------------------FYSMCRD-------FKFVPSMKH--YVCMVD 576
+ G + YS C + F+ P + + M+
Sbjct: 557 TIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMIC 616
Query: 577 LLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE---LH 630
A G E+A+ E M ++P+ ++F + L C D G +KML L
Sbjct: 617 AYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLD 676
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
P Y +V L GR +VN+ +L++
Sbjct: 677 PQMEHYSCMVDLL----GRSGQVNEALKLIE 703
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 138/544 (25%), Positives = 246/544 (45%), Gaps = 59/544 (10%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
FS +L+ C L+ ++ G +VH +++ G P +V L+ Y K + + +VFD
Sbjct: 7 LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66
Query: 206 TLDKNVVSWTSMIAG-------------------------------YVQNDCAQEGLVLF 234
++V+SW ++I G Y+ N ++ + +F
Sbjct: 67 MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
RMR + + T ++ AC+ + G +H +++G E + +AL+DMY KC
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKC 186
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+ DA VF E+ +LV W+A+I GY Q+ + LKLF D + T ASV
Sbjct: 187 KKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVF 246
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
+ A L +G +H ++ D + A +DMYAKC + DA +F T
Sbjct: 247 RSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQ 306
Query: 414 AWNSIISG----------LD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
++N+II G LD +N+ D ++L ++AC+ + G LH +
Sbjct: 307 SYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLA 366
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K G L N+ V +L+ Y KCG A ++F+ M ++ V+W+A+I + + +
Sbjct: 367 VKCG-LGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKT 425
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CM 574
L+LF ML ++P++ + +++ AC+ + G + R K + +V +
Sbjct: 426 LSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIH---GRIIKSGMGLDWFVGSAL 482
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH--PD 632
VD+ + G L EA + + + VS + + + G + + + +MLE+ PD
Sbjct: 483 VDMYGKCGMLMEAEKIHARLEEKTTVS-WNSIISGFSSQKQSENAQRYFSQMLEMGIIPD 541
Query: 633 KACY 636
Y
Sbjct: 542 NYTY 545
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 159/347 (45%), Gaps = 50/347 (14%)
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
++T ++ C+ L+AL+ GK +H ++ G ++ LL Y K + A VFD
Sbjct: 6 KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65
Query: 306 ELCSIDLVSWTAMIVGYT-------------------------------QSGYPDKALKL 334
+ D++SW +I GY +G K++++
Sbjct: 66 RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAK 393
F + ++ T A +L A + + + +G VH L I++G E+ V +ALVDMY+K
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSV 436
C + DA +F E++++ W+++I+G N + T SV
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+CA L A ++G+ LH ++ K ++ +GTA L+ YAKC A VF+ +
Sbjct: 246 FRSCAGLSAFKLGTQLHGHALKSDFAYDSI-IGTATLDMYAKCERMFDAWKVFNTLPNPP 304
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+++A+I GY Q G +L +F + + +E+ + L+ACS
Sbjct: 305 RQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACS 351
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 200/611 (32%), Positives = 319/611 (52%), Gaps = 22/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++++Y G + A VF MP+ D +F +I + + +E ++ M+ D
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
S +L AC L D+ +G ++H + K G +++ G L+D+Y KC D+ ++ +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 205 ETLDKNVVSWTSMIAGYVQ-NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ NVV W M+ + Q ND A+ LF +M+ + NQ T ++ C R +
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H +K G E + ++ L+DMY K G + AR V + L D+VSWT+MI GY
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q AL F + + +P+++ +AS +S A + + G +H+ G D +
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
+ NALV++YA+C I +A FE KD I WN ++SG
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V + T VS +SA A+L ++ G +HA K G S VG AL++ Y KCG + A
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDA 601
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+M F M E+N V+W+ +I G G +L LF M E ++PN+V F +L+ACSH
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG F SM ++ P HY C++D+ RAG+L+ A +F+E MPI D ++
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ ++GE K +LEL P + YVL+SN YA +W +QVR++M+ RG+
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGV 781
Query: 666 SKSPGCSLVDL 676
K PG S +++
Sbjct: 782 RKEPGRSWIEV 792
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 233/457 (50%), Gaps = 21/457 (4%)
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H + V G G V L+D+Y+K + +R+VF+E ++ VSW +M++GY QN
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+E L L+ +M V L S++++C K QG+ +H K G +
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
A++ +Y++CG+ R A VF ++ D V++ +I G+ Q G+ + AL++F + +++ P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF 404
+ VTI+S+L+A A LG+L G +HS + G+ DY + +L+D+Y KC + A IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 405 ETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQ 447
++ +V+ WN ++ + P+ T ++ C +
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G +H+ S K G S++YV L++ Y+K G + AR V + ++EK+ V+W++MI GY
Sbjct: 363 LGEQIHSLSVKTG-FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
+LA F +M + P+ + + +S C+ + +G + ++ +
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGD 480
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+ + +V+L AR GR+ EA E + + +++ G
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/540 (33%), Positives = 306/540 (56%), Gaps = 21/540 (3%)
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
+L+D+ ++H +I+ G ++F+ L++ Y C + ++Q+F T KNVVSWT
Sbjct: 33 KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTI 92
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
+I+G +NDC E + +F M G + N +T+ S++ A A L + K +H + ++ G
Sbjct: 93 LISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
E N + TAL+DMY K G + AR +F+ + ++VSW A++ GY+ G+ ++A+ LF
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFN 212
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ + TI S++ AS +G L +G +H IR G E D + AL+D+Y +
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLD------------------DNVSPDAVTLVSVI 437
+ DA +F KDV AW +++G N+ D++ L+ ++
Sbjct: 273 CVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGIL 332
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
S+C+ GA+Q G +HA + K ++N++VG+A+++ YA CG+ + A+ F M EK+
Sbjct: 333 SSCSHSGALQQGRRVHALAIKT-CFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDV 391
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V W+AMI G GM G G ++ LF M + P+E F ++L ACSH GMV EG + FY
Sbjct: 392 VCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYH 451
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
M + +P+++HY C++D+L RAG+L+ A F+ NMP +PD ++ L C ++
Sbjct: 452 MVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
LG + +K+ E+ P+ A YYVL+SN+YA G W V R ++ + L K PG S ++++
Sbjct: 512 LGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEIN 571
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 266/550 (48%), Gaps = 42/550 (7%)
Query: 17 PKLQLRFFSYTNQQTPTQH--ELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIV 74
P + F+ + + PTQ L Q+ AS +L K L+ HA +I
Sbjct: 2 PPVNFNFYRHLSSN-PTQRLCPLAQSHAS-----------ILRKLKDLKPLQQIHAQIIT 49
Query: 75 DGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEF 133
GLT N + L++ Y G + A+ +F P + S+ ++I ND + + ++
Sbjct: 50 SGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDV 109
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
++ M + + S VL A L I VHC V+ G + FV T LVDMY+K
Sbjct: 110 FREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSK 169
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
+G +RQ+F+ ++NVVSW ++++GY + ++E + LFN MR + + T+ SL
Sbjct: 170 FGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSL 229
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
+ A + L G +HG+I++ G E + H+ TAL+D+YV + DA VF E+ D+
Sbjct: 230 IPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDV 289
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+WT M+ G++ + D+A+K F + + + + +LS+ + G L GR VH+
Sbjct: 290 AAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHA 349
Query: 372 LGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----- 425
L I+ + + +A++DMYA C + DA+ F EKDV+ WN++I+G N
Sbjct: 350 LAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTD 409
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
+ PD T VSV+ AC+ G V G + + K N+ ++
Sbjct: 410 AIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVI 469
Query: 474 NFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE--EVQP 530
+ + G +A + M + + +S ++G + G+ + L ++ + E++P
Sbjct: 470 DILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGN----IKLGHEISQKIFEMEP 525
Query: 531 NEVIFTTILS 540
N+ + +LS
Sbjct: 526 NDAGYYVLLS 535
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 30/454 (6%)
Query: 47 LPSIPCLNLLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDS 105
LP+ L L+ + KS H + G N T LV MY FG + AR +F+S
Sbjct: 129 LPAFANLGLIRIAKSV------HCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFES 182
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M + S+ ++ Y + ++ ++ + MR++ D + ++ A + + G
Sbjct: 183 MSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H I++ G D + T L+D+Y + + +VF E K+V +WT M+ G+
Sbjct: 243 TGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSG 302
Query: 225 DCAQEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ FN+M ++ + I L ++++C+ AL QG+ +H +K N +
Sbjct: 303 RHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFV 362
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
+A++DMY CGN+ DA+ F + D+V W AMI G +GY A+ LF K +
Sbjct: 363 GSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGL 422
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMV--HSLGIRLGLEDYTVINALVDMYAKCHVIADAR 401
P+ T SVL A + G + G + H + + + ++D+ + + DA
Sbjct: 423 DPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQL-DAA 481
Query: 402 YIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
Y F PD +++ AC G +++G + +
Sbjct: 482 YSFINNMP----------------FQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEP 525
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ YV L N YA G+ + +M ++R K
Sbjct: 526 NDAGYYV--LLSNMYALAGNWEGVKMTRASLRSK 557
>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53360, mitochondrial; Flags: Precursor
gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 768
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 337/652 (51%), Gaps = 30/652 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKC------NTKLVSMYGSFGHVKYARSVFDSM 106
++L+ C S+ SL I D + N C N ++SMYG G ++ AR VFD M
Sbjct: 71 ISLICACSSSRSLA--QGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P + S+ +I Y N + + Y M + D F F ++KAC D+ G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 167 KVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H +++K+ + L+ MY + + + +VF K+++SW+S+IAG+ Q
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 226 CAQEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E L M G N+ GS + AC+ L G +HG +K + N+
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+L DMY +CG + AR VFD++ D SW +I G +GY D+A+ +F+ + + F
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYI 403
P+ +++ S+L A + L+ G +HS I+ G L D TV N+L+ MY C + +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 404 FET-TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
FE + D ++WN+I++ L PD +T+ +++ C + +
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+++GS +H YS K GL + ++ L++ YAKCG AR +FD+M ++ V+WS +I
Sbjct: 489 LKLGSQVHCYSLKTGL-APEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GY G G +L LF +M + ++PN V F +L+ACSH G+V EG K + +M +
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P+ +H C+VDLLARAGRL EA F++ M +EPDV ++ L C L + +
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+L++ P + +VL+ +++AS G W +R MK+ + K PG S ++++
Sbjct: 668 ILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIE 719
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 259/537 (48%), Gaps = 49/537 (9%)
Query: 124 NDLYKDIVEFYKCMRK------RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG 177
++ Y++ +E + +K RL+ + ++ AC R + +G K+H I+
Sbjct: 44 SNFYREALEAFDFAQKNSSFKIRLR-----TYISLICACSSSRSLAQGRKIHDHILNSNC 98
Query: 178 P-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D+ + ++ MY KC + +R+VFD ++N+VS+TS+I GY QN E + L+ +
Sbjct: 99 KYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLK 158
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKC 294
M + + +Q GS++ ACA + GK LH ++K +E +SHL+ AL+ MYV+
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRF 216
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASV 353
+ DA VF + DL+SW+++I G++Q G+ +AL + + F PN S
Sbjct: 217 NQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDV 412
L A + L + G +H L I+ L + +L DMYA+C + AR +F+ D
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 413 IAWNSIISGL------DDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAY 455
+WN II+GL D+ VS PDA++L S++ A A+ G +H+Y
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGG 514
K G L +++ V +LL Y C D +F+ R ++V+W+ ++
Sbjct: 397 IIKWGFL-ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-- 572
L LF ML E +P+ + +L C + G + C K + + ++
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH---CYSLKTGLAPEQFIKN 512
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE---VMIKKM 626
++D+ A+ G L +A ++M DV + + G Y++ GE ++ K+M
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVG---YAQSGFGEEALILFKEM 565
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 200/611 (32%), Positives = 319/611 (52%), Gaps = 22/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++++Y G + A VF MP+ D +F +I + + +E ++ M+ D
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
S +L AC L D+ +G ++H + K G +++ G L+D+Y KC D+ ++ +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 205 ETLDKNVVSWTSMIAGYVQ-NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ NVV W M+ + Q ND A+ LF +M+ + NQ T ++ C R +
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H +K G E + ++ L+DMY K G + AR V + L D+VSWT+MI GY
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q AL F + + +P+++ +AS +S A + + G +H+ G D +
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
+ NALV++YA+C I +A FE KD I WN ++SG
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V + T VS +SA A+L ++ G +HA K G S VG AL++ Y KCG + A
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDA 601
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+M F M E+N V+W+ +I G G +L LF M E ++PN+V F +L+ACSH
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG F SM ++ P HY C++D+ RAG+L+ A +F+E MPI D ++
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ ++GE K +LEL P + YVL+SN YA +W +QVR++M+ RG+
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGV 781
Query: 666 SKSPGCSLVDL 676
K PG S +++
Sbjct: 782 RKEPGRSWIEV 792
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 233/457 (50%), Gaps = 21/457 (4%)
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H + V G G V L+D+Y+K + +R+VF+E ++ VSW +M++GY QN
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+E L L+ +M V L S++++C K QG+ +H K G +
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
A++ +Y++CG+ R A VF ++ D V++ +I G+ Q G+ + AL++F + +++ P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF 404
+ VTI+S+L+A A LG+L G +HS + G+ DY + +L+D+Y KC + A IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 405 ETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQ 447
++ +V+ WN ++ + P+ T ++ C +
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G +H+ S K G S++YV L++ Y+K G + AR V + ++EK+ V+W++MI GY
Sbjct: 363 LGEQIHSLSVKTG-FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
+LA F +M + P+ + + +S C+ + +G + ++ +
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGD 480
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+ + +V+L AR GR+ EA E + + +++ G
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 304/562 (54%), Gaps = 30/562 (5%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
++ C + + + +G+ +H +K D V ++++YAKCR + +RQVFDE ++N
Sbjct: 9 LIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERN 68
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
+VSW++MI+GY Q L LF+++ + N+ S+++ACA L+ L QGK +HG
Sbjct: 69 LVSWSAMISGYEQIGEPISALGLFSKLN---IVPNEYVYASVISACASLKGLVQGKQIHG 125
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
LK G++ S + AL+ MY+KCG DA ++E ++ V++ A+I G+ ++ PDK
Sbjct: 126 QALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDK 185
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVD 389
++ FFP+ T +L +L G ++H I+L L I N ++
Sbjct: 186 GFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLIIT 245
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD------------------NVSPDAV 431
MY+K +++ +A F + EKD+I+WN+ IS V PD
Sbjct: 246 MYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDEF 305
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
T S ++AC+ L ++ G +H + + L +V G AL+N YAKCG A +F
Sbjct: 306 TFASALAACSGLASMCNGKQIHGHLIRTRLYQ-DVGAGNALINMYAKCGCIAKAYYIFSK 364
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
M +N V+W+ MI G+G G GG + LF+ M V+P+ V F +L+A +H G+V EG
Sbjct: 365 MEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEG 424
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCG 611
F SM + P ++H+ C++DLL RAGRL EA E+M+ P D + G+ L C
Sbjct: 425 LVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACR 484
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 671
L+ D G+ +++L+L P YVL+SNLYASD W V + +L+K GL K PG
Sbjct: 485 LHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGH 544
Query: 672 SLVDLD------IANDFSFSRV 687
SL++++ DFS SR+
Sbjct: 545 SLIEVNGTFEKFTVVDFSHSRI 566
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/469 (28%), Positives = 214/469 (45%), Gaps = 63/469 (13%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
+GSL+ C+K +AL QG LH +K + + +L++Y KC +R+AR VFDE+
Sbjct: 6 VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
+LVSW+AMI GY Q G P AL LF+ + PN ASV+SA A L L G+
Sbjct: 66 ERNLVSWSAMISGYEQIGEPISALGLFSK---LNIVPNEYVYASVISACASLKGLVQGKQ 122
Query: 369 VHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS 427
+H ++ GL+ + + NAL+ MY KC +DA + E + +A+N++I+G +N
Sbjct: 123 IHGQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQ 182
Query: 428 PDA-----------------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
PD T V ++ C S ++ G LH + K L+S ++G
Sbjct: 183 PDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLK-LNSTAFIGN 241
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQ 529
++ Y+K + A F ++ EK+ ++W+ I D +L F +MLNE V+
Sbjct: 242 LIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVR 301
Query: 530 PNEVIFTTILSACS-----------HTGMV----------GEGWKCFYSMC----RDFKF 564
P+E F + L+ACS H ++ G Y+ C + +
Sbjct: 302 PDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYI 361
Query: 565 VPSMKH-----YVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRF 616
M+H + M+ G +A E M+ M ++PD F L
Sbjct: 362 FSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLV 421
Query: 617 DLGEVMIKKMLE---LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
D G V M E + P+ + L+ L GR R+N+ +E MK+
Sbjct: 422 DEGLVYFNSMEETYGISPEIEHFSCLIDLL----GRAGRLNEAKEYMKK 466
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 201/421 (47%), Gaps = 29/421 (6%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+L+ C T +L+ HA+ I +D + ++++Y ++ AR VFD M
Sbjct: 8 SLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSER 67
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ MI Y + + + K + +V++ V+ AC L+ + +G ++H
Sbjct: 68 NLVSWSAMISGY---EQIGEPISALGLFSKLNIVPNEYVYASVISACASLKGLVQGKQIH 124
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ +K G SFV L+ MY KC + ++E L+ N V++ ++I G+V+N
Sbjct: 125 GQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPD 184
Query: 229 EGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+G + M ++GF ++ T L+ C L +G+ LH +K+ + + + +
Sbjct: 185 KGFEVLRMMYQDGFFP-DRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLI 243
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPN 346
+ MY K + +A F + DL+SW I + +KAL+ F + P+
Sbjct: 244 ITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPD 303
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFE 405
T AS L+A + L ++ G+ +H IR L +D NAL++MYAKC IA A YIF
Sbjct: 304 EFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFS 363
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
+++++WN++I+G ++ V PD+VT V +++A G V
Sbjct: 364 KMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDE 423
Query: 449 G 449
G
Sbjct: 424 G 424
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/636 (32%), Positives = 336/636 (52%), Gaps = 25/636 (3%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ H L+I G ++ CN LV++Y + A +F +M + D S+ +I
Sbjct: 281 EQLHCLVIKWGFHSETYVCN-GLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ 339
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL 183
+E + M++ + D + +L AC + + +GM++H +K G +L
Sbjct: 340 QGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIIL 399
Query: 184 TG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGF 241
G L+D+Y+KC D+ ++ + F T +N+V W M+ Y Q D + +F +M+ EG
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGM 459
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ NQ T S++ C L AL+ G+ +H +++K G ++N ++ + L+DMY K G + A
Sbjct: 460 IP-NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALAL 518
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+ L D+VSWTAMI GY Q +AL+LF + ++ +++ AS +SA A +
Sbjct: 519 RILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIR 578
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L G+ +H+ G D ++ NAL+ +YA+C I +A FE +K+ I+WNS++S
Sbjct: 579 ALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638
Query: 421 GLDDN--VSPDAVTLVSVISACASLGA---------------VQVGSSLHAYSTKQGLLS 463
GL + V ++ A + ++ G +H+ K G
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY-D 697
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
S V +L++ YAK G A F+ M E+N ++W+AMI GY G G +L LF +M
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+ PN V F +LSACSH G+V EG F SM + VP +HYVC+VDLL RAG+
Sbjct: 758 KVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQ 817
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L+ A+E+++ MPI D ++ L C ++ ++GE +LEL P+ + YVL+SN+
Sbjct: 818 LDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNI 877
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
YA +WI + R+LMK RG+ K PG S +++ A
Sbjct: 878 YAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNA 913
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 157/540 (29%), Positives = 267/540 (49%), Gaps = 30/540 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE-- 143
LV Y G A VFD N +S+ MI + K + + R+ L E
Sbjct: 99 LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ---KSNFQVFCLFRRMLAEGI 155
Query: 144 -HDNFVFSKVLKACCELRDI--DEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSS 199
+ + F+ VLKAC DI + +VH G S V L+D+Y+K I S+
Sbjct: 156 TPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
++VF+ K++V+W +MI+G QN +E ++LF M + L S+++A K+
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ G+ LH ++K G +++ L+ +Y + + A +F + S D VS+ ++I
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLI 334
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
G Q G+ D+AL+LFT + P+ +T+AS+LSA A +G L+ G +HS I+ G+
Sbjct: 335 SGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS--GLDDNVS--------- 427
D + +L+D+Y+KC + A F TT ++++ WN ++ G DN+S
Sbjct: 395 ADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454
Query: 428 ------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
P+ T S++ C SLGA+ +G +H + K G NVYV + L++ YAK G
Sbjct: 455 QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG-FQLNVYVCSVLIDMYAKYGQ 513
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A + + E + V+W+AMI GY +L LF +M +Q + + F + +SA
Sbjct: 514 LALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISA 573
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C+ + +G + ++ F + ++ L AR GR++EA E + + ++S
Sbjct: 574 CAGIRALRQGQQ-IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS 632
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 22/339 (6%)
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
L N M E V N L+ C +L + LH I K G + L+ +L+D Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
+ G+ A VFDE + + SW MI + + LF PN T A
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 353 VLSASAQLGNL--NMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSE 409
VL A G++ N + VHS G + ++ N L+D+Y+K I A+ +F
Sbjct: 165 VLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
KD++ W ++ISGL N + P L SV+SA + ++G L
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL 283
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H K G S YV L+ Y++ SA +F M ++ V+++++I G QG
Sbjct: 284 HCLVIKWG-FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+L LF+ M + ++P+ + ++LSAC+ G + +G
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
Length = 795
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 324/604 (53%), Gaps = 21/604 (3%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + A F + P + VMIR + DL D + Y+ M D F F VL
Sbjct: 68 GRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVL 127
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
K C + EG H ++K+G G D + LV +YAK +G + +VFD +++V
Sbjct: 128 KCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIV 187
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG-NQITLGSLVTACAKLRALHQGKWLHGY 271
SW +M+ GYV N L F M + G + + + + + AC AL G+ +HGY
Sbjct: 188 SWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGY 247
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
++ G+E + + T+L+DMY KCGN+ A +VF ++ +V+W MI GY + P A
Sbjct: 248 AIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDA 307
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDM 390
F + F VT ++L+A AQ + GR VH+ +R + V+ AL++M
Sbjct: 308 FDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEM 367
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTL 433
Y K + + IF ++K +++WN++I+ L+ + PD T+
Sbjct: 368 YGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTM 427
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+V+ A LG+++ +H+Y K G S + + A+++ YA+CG+ ++R +FD M
Sbjct: 428 TTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTL-IMNAVMHMYARCGNIVASREIFDKMP 486
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
K+ ++W+ +I GY + G G +L +F +M ++PNE F ++L+ACS +G+ EGWK
Sbjct: 487 GKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWK 546
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F SM +++ +P ++HY CM DLL RAG L E L F+ENMPI P ++G+ L
Sbjct: 547 EFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNK 606
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
+ D+ E +++ +L + YV++S++YA GRW V ++R LMK++GL ++ SL
Sbjct: 607 NDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSL 666
Query: 674 VDLD 677
V+L+
Sbjct: 667 VELN 670
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 154/298 (51%), Gaps = 2/298 (0%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H I GL D K T LV MY G+V +A +VF MP ++ MI Y LN
Sbjct: 242 REIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALN 301
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVL 183
+ D + + MR + + +L AC + G VH +V+ P +
Sbjct: 302 ERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLE 361
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L++MY K + SS ++F + DK +VSW +MIA Y+ + QE + LF + +
Sbjct: 362 TALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLY 421
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ T+ ++V A L ++ Q K +H YI+K+G ++ ++ A++ MY +CGNI +R +
Sbjct: 422 PDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREI 481
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
FD++ D++SW +I+GY G AL++F + K + PN T SVL+A + G
Sbjct: 482 FDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSG 539
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 113/213 (53%), Gaps = 5/213 (2%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
+ +NLL C T S ++ HA ++ L + T L+ MYG G V+ + +F
Sbjct: 324 VTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQ 383
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ + S+ MI Y ++Y++ + + + + D F + V+ A L I +
Sbjct: 384 ITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQC 443
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H IVK+G G + ++ ++ MYA+C +I +SR++FD+ K+V+SW ++I GY +
Sbjct: 444 KQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIH 503
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+ L +F+ M+ +E N+ T S++TAC+
Sbjct: 504 GQGKIALEMFDEMKCSGMEPNESTFVSVLTACS 536
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 312/531 (58%), Gaps = 23/531 (4%)
Query: 167 KVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H ++ +G S F++T L+ + DI +RQVFD+ V W ++I GY +N+
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNN 98
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
Q+ L+++++M+ V + T L+ AC L L G+++H + ++G E + +
Sbjct: 99 HFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQN 158
Query: 286 ALLDMYVKCGNIRDARSVFD--ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
L+ +Y KC + AR+VF+ L +VSWTA++ Y Q+G P +AL++F+ + D
Sbjct: 159 GLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDV 218
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P+ V + SVL+A L +L GR +H+ +++GLE + ++ +L MYAKC +A A+
Sbjct: 219 KPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKI 278
Query: 403 IFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
+F+ ++I WN++ISG ++ +V PD +++ S ISACA +G+
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
++ + Y ++ +V++ +AL++ +AKCG + AR VFD +++ V WSAMI
Sbjct: 339 LEQARWMDEYVSRSDY-RDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIV 397
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GYG+ G +++L+ M + V PN+V F +L AC+H+GMV EGW F M D K
Sbjct: 398 GYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA-DHKIN 456
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P +HY C++DLL RAG L++A E ++ MP++P V+++GA L C + +LG+ ++
Sbjct: 457 PQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQ 516
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ + P +YV +SNLYA+ W RV +VR MK++GL+K GCS V++
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 227/409 (55%), Gaps = 22/409 (5%)
Query: 63 GSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
L+ HA L+V GL + TKL+ S+G + +AR VFD +P P + + +IR Y
Sbjct: 35 AQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGY 94
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
N+ ++D + Y M+ D+F F +LKAC L + G VH ++ ++G D
Sbjct: 95 SRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADV 154
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
FV GL+ +YAKCR +G +R VF+ ++ +VSWT++++ Y QN E L +F++MR
Sbjct: 155 FVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMR 214
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ V+ + + L S++ A L+ L QG+ +H ++K+G+E L+ +L MY KCG +
Sbjct: 215 KMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVA 274
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
A+ +FD++ S +L+ W AMI GY ++G+ A+ LF + D P+ ++I S +SA A
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACA 334
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
Q+G+L R + R D I +AL+DM+AKC + AR +F+ T ++DV+ W++
Sbjct: 335 QVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSA 394
Query: 418 IISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
+I G D V P+ VT + ++ AC G V+ G
Sbjct: 395 MIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREG 443
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 207/403 (51%), Gaps = 33/403 (8%)
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
Q + +H +L +G++ + L+T L+ G+I AR VFD+L + W A+I GY+
Sbjct: 36 QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYS 95
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
++ + AL +++ + A P+ T +L A L +L MGR VH+ RLG E D
Sbjct: 96 RNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVF 155
Query: 383 VINALVDMYAKCHVIADARYIFE--TTSEKDVIAWNSIISGLDDN--------------- 425
V N L+ +YAKC + AR +FE E+ +++W +I+S N
Sbjct: 156 VQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK 215
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V PD V LVSV++A L ++ G S+HA K GL + + +L YAKCG
Sbjct: 216 MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLL-ISLNTMYAKCGQVA 274
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+A+++FD M+ N + W+AMI GY G ++ LF +M+N++V+P+ + T+ +SAC+
Sbjct: 275 TAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACA 334
Query: 544 HTGMVGEG-WKCFY---SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
G + + W Y S RD F+ S ++D+ A+ G +E A + ++ D
Sbjct: 335 QVGSLEQARWMDEYVSRSDYRDDVFISS-----ALIDMFAKCGSVECARSVFDRT-LDRD 388
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLV 640
V ++ A + G GL+ + + + M +HP+ + L+
Sbjct: 389 VVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLL 431
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 301/547 (55%), Gaps = 22/547 (4%)
Query: 152 VLKACCELRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
+L++ + +G ++H ++ + ++++ T L YA C + + +FD + K
Sbjct: 65 LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
N W MI GY N + LVL+ M + T ++ AC L + G+ +H
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVH 184
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
++ G+E + ++ +LL MY K G++ AR VFD + DL SW MI GY ++
Sbjct: 185 SEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSG 244
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT--VINAL 387
A +F A F + T+ +LSA A L + G+++H +R + +Y N+L
Sbjct: 245 TAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSL 304
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDA 430
++MY C+ + DAR +FE KD ++WNS+I G D PD
Sbjct: 305 IEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQ 364
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
VT ++V+ AC + A++ G S+H+Y K+G +N VGTAL++ Y+KCG +R VFD
Sbjct: 365 VTFIAVLGACDQIAALRYGMSIHSYLVKKGF-DANTIVGTALVDMYSKCGSLACSRRVFD 423
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
M +K+ V+WSAM+ GYG+ G G ++++ M V P+ +FT+ILSACSH G+V E
Sbjct: 424 EMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVE 483
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G + FY M +++ P++ HY CMVDLL RAG L+EA + M I+P ++ A L
Sbjct: 484 GKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTAS 543
Query: 611 GLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
L+ L E+ +K+ +++P Y+ +SN+YA++ RW V +VR +++++GL KSPG
Sbjct: 544 RLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPG 603
Query: 671 CSLVDLD 677
CS ++LD
Sbjct: 604 CSFIELD 610
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/497 (30%), Positives = 256/497 (51%), Gaps = 31/497 (6%)
Query: 34 QHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKA---FHALLIVDGL--TNDKCNTKLVS 88
+H L Q + L S+ C LL +T S K HA +I + N NTKL +
Sbjct: 49 EHPLQQ-----YPLTSLQCGALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAA 103
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
Y G + A +FD + + + + MIR Y N L + Y+ M + DNF
Sbjct: 104 FYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFT 163
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ VLKAC +L ++ G +VH E+V G D +V L+ MYAK D+G++R VFD
Sbjct: 164 YPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMA 223
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
++++ SW +MI+GY +N + ++F+ M + + + TL L++ACA L+A+ +GK
Sbjct: 224 ERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKV 283
Query: 268 LHGYILKIGI-EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HGY ++ I N +L++MY C + DAR +F+ + D VSW +MI+GY ++G
Sbjct: 284 IHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNG 343
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-N 385
++L+LF P+ VT +VL A Q+ L G +HS ++ G + T++
Sbjct: 344 DAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGT 403
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------LD----DNVSP 428
ALVDMY+KC +A +R +F+ +K +++W+++++G LD ++V P
Sbjct: 404 ALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIP 463
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D S++SAC+ G V G + K+ + + + +++ + G A ++
Sbjct: 464 DNGVFTSILSACSHAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVI 523
Query: 489 FDAMREKNTV-TWSAMI 504
M K T W+A++
Sbjct: 524 IRTMEIKPTSDIWAALL 540
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 204/608 (33%), Positives = 329/608 (54%), Gaps = 22/608 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV+ Y + G AR VFD MP D S+ ++ + +N ++ D M + +
Sbjct: 160 LVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLN 219
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT-GLVDMYAKCRDIGSSRQVFD 204
V+ AC ++ G+ +H VKVG L LVDMY K D+ +S QVFD
Sbjct: 220 VASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFD 279
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
L++N VSW S I ++ + L +F +M E V ITL SL+ A +L +
Sbjct: 280 GMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDL 339
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY +K ++++ + +L+DMY K G++ A ++F+++ ++VSW AMI Q
Sbjct: 340 GREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQ 399
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +A +L TD + + PN +T+ +VL A A++ +L MG+ +H+ IR GL D +
Sbjct: 400 NGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFI 459
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
NAL+DMY+KC ++ AR IFE SEKD +++N++I G + +
Sbjct: 460 SNALIDMYSKCGQLSLARNIFE-RSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGI 518
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
DAV+ + +SAC +L + G +H ++ LLS + ++ +LL+ Y K G +A
Sbjct: 519 DYDAVSFMGALSACTNLSVFKHGKEIHCVLVRR-LLSGHPFLSNSLLDLYTKGGMLVTAS 577
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F+ + +K+ +W+ MI GYGM G + LF M + + + V + +L+ACSH G
Sbjct: 578 KIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGG 637
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V +G K F M P HY CMVDLL RAG+L + E + +MP + ++GA
Sbjct: 638 LVDKGKKYFSQMVAQ-NIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGAL 696
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ +L + + + EL P+ + YY L+ N+YA GRW N++R+LMK R +
Sbjct: 697 LGACRIHGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQ 756
Query: 667 KSPGCSLV 674
K+P S V
Sbjct: 757 KNPAYSWV 764
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 200/556 (35%), Positives = 312/556 (56%), Gaps = 32/556 (5%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFD- 204
F+ ++L + + I ++H ++ G D FVL+ + + + K IG FD
Sbjct: 3 FLKLRLLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGK--HIGFVDYAFDF 60
Query: 205 ---ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLR 260
L + + ++IA Y + + +++ R+ GFV + T ++ AC K
Sbjct: 61 LNQTDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVP-DMYTFPVVLKACTKFL 119
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ +G+ +HG +K+G + ++ +LL Y CG A VFDE+ D+VSWT +I
Sbjct: 120 GVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLIS 179
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
GY ++G D+A+ LF D PN T SVL A ++G L+MG+ VH L +
Sbjct: 180 GYVRTGLFDEAINLFLK---MDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGI 236
Query: 381 YTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD--------------- 424
V+ NALVDMY KC + +AR +F+ ++D+++W SIISGL
Sbjct: 237 GLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQ 296
Query: 425 --NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V PD + L SV+SACASLGA+ G + Y +QG+ ++++GTAL++ YAKCG
Sbjct: 297 ISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGI-EWDIHIGTALVDMYAKCGCI 355
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ A +F+ + +N TW+A++GG M G G +L F M+ ++PNEV F IL+AC
Sbjct: 356 EMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTAC 415
Query: 543 SHTGMVGEGWKCFYSMC-RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
H+G+V EG FY M + F F P ++HY CM+DLL RAG L+EA +F+ NMP+ PDV
Sbjct: 416 CHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVL 475
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++GA L C +L + ++ +LEL + YVL+SN+YA++ RW V +VR LMK
Sbjct: 476 IWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMK 535
Query: 662 QRGLSKSPGCSLVDLD 677
+G+ K PG S++++D
Sbjct: 536 DKGIRKFPGSSVIEVD 551
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 244/507 (48%), Gaps = 31/507 (6%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFG-HVKYARSVFDSMPNPDF 111
LN + CK+ SLK HA LI GL +D+ VS + FG H+ + FD + D
Sbjct: 9 LNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEF--FGKHIGFVDYAFDFLNQTDL 66
Query: 112 Y----SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ + +I Y + K Y + D + F VLKAC + + EG +
Sbjct: 67 HVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQ 126
Query: 168 VHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
VH VK+G D +V L+ Y+ C G + +VFDE L ++VVSWT +I+GYV+
Sbjct: 127 VHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGL 186
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E + LF +M V N T S++ AC ++ L GK +HG + K I + A
Sbjct: 187 FDEAINLFLKMD---VVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNA 243
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+DMYVKC + +AR +FDEL D+VSWT++I G Q P +L+LF D + + P+
Sbjct: 244 LVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPD 303
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
+ + SVLSA A LG L+ GR V R G+E D + ALVDMYAKC I A +IF
Sbjct: 304 RIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFN 363
Query: 406 TTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQV 448
+++ WN+++ GL + P+ VT +++++AC G V
Sbjct: 364 GIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAE 423
Query: 449 GSSLHAYSTKQGL-LSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGG 506
G S Q S + +++ + G A + + + + + W A++
Sbjct: 424 GRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSA 483
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEV 533
G+ S + S +L + Q + V
Sbjct: 484 CKANGNVELSQEILSHLLELKSQDSGV 510
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 196/421 (46%), Gaps = 34/421 (8%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
L+ Y G A VFD M D S+ +I Y L+ + + + M
Sbjct: 143 QNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINLFLKMDVV-- 200
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ F VL AC + + G VH + K G V LVDMY KC + +R+
Sbjct: 201 -PNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVKCECLCEARK 259
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FDE D+++VSWTS+I+G VQ ++ L LF M+ VE ++I L S+++ACA L A
Sbjct: 260 LFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGA 319
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G+W+ YI + GIE + H+ TAL+DMY KCG I A +F+ + + ++ +W A++ G
Sbjct: 320 LDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGG 379
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR------MVHSLGIR 375
G+ +ALK F A PN VT ++L+A G + GR +
Sbjct: 380 LAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFS 439
Query: 376 LGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV 434
LE Y ++D+ + ++ +A ++I DV+ W ++
Sbjct: 440 PRLEHY---GCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGAL---------------- 480
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
+SAC + G V++ + ++ + S VYV L N YA V M++
Sbjct: 481 --LSACKANGNVELSQEILSHLLELKSQDSGVYV--LLSNIYATNERWDDVTRVRRLMKD 536
Query: 495 K 495
K
Sbjct: 537 K 537
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/643 (31%), Positives = 346/643 (53%), Gaps = 27/643 (4%)
Query: 59 CKSTGSLKA---FHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C G+L H ++ G D T L+ Y G+V AR +FD + ++
Sbjct: 164 CTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTW 223
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
+I Y + ++ + MR+ D +V S VL AC L ++ G ++H +++
Sbjct: 224 TAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLR 283
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
G D V+ G++D Y KC + + R++F+ +DK+VVSWT+MIAG +QN + + L
Sbjct: 284 RGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDL 343
Query: 234 FNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
F M R+G+ + + S++ +C L+AL +G+ +H Y +K+ I+ + + L+DMY
Sbjct: 344 FVEMVRKGW-KPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYA 402
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
KC ++ +AR VFD + +I++VS+ AMI GY++ +AL LF + + + P +T S
Sbjct: 403 KCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVS 462
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+L S+ L L + +H L I+ G+ D +AL+D+Y+KC + DAR +FE ++D
Sbjct: 463 LLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRD 522
Query: 412 VIAWNSIISGLDDNVS-----------------PDAVTLVSVISACASLGAVQVGSSLHA 454
++ WN++ SG + P+ T +VI+A +++ +++ G H
Sbjct: 523 IVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHN 582
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
K GL + +V +L++ YAKCG + + F + +++ W++MI Y GD
Sbjct: 583 QVIKMGL-DDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAA 641
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
+L +F M+ E V+PN V F +LSACSH G++ G+ F SM + F P + HY CM
Sbjct: 642 KALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSK-FGIEPGIDHYACM 700
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
V LL RAG++ EA EF++ MPI+P ++ + L C + +LG + + P +
Sbjct: 701 VSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPADS 760
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
Y+L+SN++AS G W V VRE M + K PG S ++++
Sbjct: 761 GSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVN 803
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 190/679 (27%), Positives = 336/679 (49%), Gaps = 78/679 (11%)
Query: 47 LPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC---NTKLVSMYGSFGHVKYARSVF 103
L +P N+L ++ K HA ++V G NT L+ Y A+ +F
Sbjct: 56 LLQLPSPNIL----TSHYYKKIHAHIVVLGFHQHDVFLVNT-LLHAYSKMNLQSDAQKLF 110
Query: 104 DSMPNPDFYSFQVMIRWYFLNDL-YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
D+MP+ + ++ M+ Y + + ++ F + MR ++ + ++ + V++AC +L ++
Sbjct: 111 DTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNL 170
Query: 163 DEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
+ +++H +VK G D +V T L+D YAK + +R +FD K V+WT++IAGY
Sbjct: 171 SQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGY 230
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
+ ++ L LFN+MREG V ++ + S+++AC+ L L GK +HGY+L+ G +++
Sbjct: 231 AKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDV 290
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+V ++D Y+KC ++ R +F+ L D+VSWT MI G Q+ + A+ LF +
Sbjct: 291 SVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRK 350
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADA 400
+ P+ SVL++ L L GR VH+ I++ ++ D V N L+DMYAKC + +A
Sbjct: 351 GWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNA 410
Query: 401 RYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASL 443
R +F+ + +V+++N++I G P +T VS++ +SL
Sbjct: 411 RKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSL 470
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
+++ S +H K G +S + + G+AL++ Y+KC AR+VF+ + +++ V W+AM
Sbjct: 471 FLLELSSQIHCLIIKFG-VSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAM 529
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR--- 560
GY Q + SL L+ D+ ++PNE F +++A S+ + G + + +
Sbjct: 530 FSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGL 589
Query: 561 -DFKFVPSMKHYVCMVDLLARAGRLEE-------------------------------AL 588
D FV + +VD+ A+ G +EE AL
Sbjct: 590 DDDPFVTN-----SLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKAL 644
Query: 589 EFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIKKM--LELHPDKACYYVLVSNL 643
E E M +E P+ F L C DLG + M + P Y +VS L
Sbjct: 645 EVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPGIDHYACMVSLL 704
Query: 644 YASDGRWIRVNQVRELMKQ 662
GR ++ + +E +K+
Sbjct: 705 ----GRAGKIYEAKEFVKK 719
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 213/615 (34%), Positives = 333/615 (54%), Gaps = 25/615 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPN--PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
L+++Y V ARSVFD MP D S+ M N + + + +
Sbjct: 90 LLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLL 149
Query: 144 HDNFVFSKVLKAC--CELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSS 199
+ F +AC EL + G V + K+G G D V L+DM+AK D+ +
Sbjct: 150 PNAFTLCAATQACFASELFHL-AGGAVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAM 208
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R+VFD ++ VV WT +I Y Q+ + E + LF M E + +Q TL S+++AC +L
Sbjct: 209 RRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPDQYTLSSMLSACTEL 268
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN---IRDARSVFDELCSIDLVSWT 316
+ G+ LH L++G+E +S + L+DMY K N + +AR VF+ + ++++WT
Sbjct: 269 GSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWT 328
Query: 317 AMIVGYTQSGYPD-KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A++ GY Q G D + + LF PNH+T +S+L A A LG+ + GR +H+ ++
Sbjct: 329 ALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVK 388
Query: 376 LGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-DNVSPD---- 429
L D V+ NALV MYA+ I +AR+ F+ EK++++++ + G N D
Sbjct: 389 SNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIE 448
Query: 430 -------AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
T S+ISA AS+G + G LHA S K G S+ +G +L++ Y++CG
Sbjct: 449 RMELGISTFTFGSLISAAASVGMLTKGQRLHALSLKAGF-GSDRAIGNSLVSMYSRCGYL 507
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A VFD M + N ++W++MI G G +L LF DM+ V+PN+V + +LSAC
Sbjct: 508 VDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSAC 567
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH G+V EG + F M + +P M+HY CMVDLL R+G +E+AL+F+ MP + D +
Sbjct: 568 SHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALV 627
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ L C ++ D+GE+ +++L P YVL+SNLYA G W +V ++R LM+
Sbjct: 628 WKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRD 687
Query: 663 RGLSKSPGCSLVDLD 677
+ L K G S + +D
Sbjct: 688 KNLMKEKGLSWMHVD 702
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 235/465 (50%), Gaps = 40/465 (8%)
Query: 161 DIDEGMKVHCEIVKVGG---PDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWT 215
DI G + +++ G D+ V L+ +Y+KC + ++R VFD +++VSWT
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH-QGKWLHGYILK 274
+M + +N E L LF E + N TL + AC H G + G + K
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181
Query: 275 IGI-EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
+G + + AL+DM+ K G++ R VFD L +V WT +I Y QSGY D+A++
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYA 392
LF D F P+ T++S+LSA +LG+ +G+ +HSL +RLGLE D V LVDMYA
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYA 301
Query: 393 KCH---VIADARYIFETTSEKDVIAWNSIISG------------------LDDNVSPDAV 431
K H + +AR +F + +V+AW +++SG L++ + P+ +
Sbjct: 302 KSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHI 361
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
T S++ ACA+LG G +H + K L NV VG AL++ YA+ G + AR FD
Sbjct: 362 TYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNV-VGNALVSMYAESGSIEEARHAFDQ 420
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT--TILSACSHTGMVG 549
+ EKN V++S + DG G + D E ++ FT +++SA + GM+
Sbjct: 421 LYEKNMVSFSGNL-------DGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLT 473
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+G + +++ F +V + +R G L +A + + M
Sbjct: 474 KGQR-LHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM 517
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 196/383 (51%), Gaps = 41/383 (10%)
Query: 262 LHQGKWLHGYILKIG--IEINSHLVTALLDMYVKCGNIRDARSVFDELCS--IDLVSWTA 317
+H G+ L G++L+ G +E ++ + +LL +Y KC + ARSVFD + DLVSWTA
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA--SAQLGNLNMGRMVHSLGIR 375
M +++G +AL+LF + PN T+ + A +++L +L G V L +
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHL-AGGAVLGLVFK 181
Query: 376 LGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------ 421
LG D +V AL+DM+AK + R +F+ E+ V+ W +I+
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241
Query: 422 -----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
L++ PD TL S++SAC LG+ ++G LH+ + + G L S+ V L++ Y
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLG-LESDSCVSCGLVDMY 300
Query: 477 AKCGDAQS---ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS-LALFSDMLNEEVQPNE 532
AK + QS AR VF+ M + N + W+A++ GY +G + LF MLNE ++PN
Sbjct: 301 AKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNH 360
Query: 533 VIFTTILSACSHTGMVGEGWK----CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+ ++++L AC++ G G + C S D V + +V + A +G +EEA
Sbjct: 361 ITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGN-----ALVSMYAESGSIEEAR 415
Query: 589 EFMENMPIEPDVSLFGAFLHGCG 611
+ + E ++ F L G G
Sbjct: 416 HAFDQL-YEKNMVSFSGNLDGDG 437
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 155/330 (46%), Gaps = 37/330 (11%)
Query: 362 NLNMGRMVHSLGIRLG--LE-DYTVINALVDMYAKCHVIADARYIFE--TTSEKDVIAWN 416
++++GR + +R G LE D V N+L+ +Y+KC +A AR +F+ +D+++W
Sbjct: 62 DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121
Query: 417 SIIS-----------------GLDDNVSPDAVTLVSVISAC-ASLGAVQVGSSLHAYSTK 458
++ S L++ + P+A TL + AC AS G ++ K
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G ++V VG AL++ +AK GD + R VFD + E+ V W+ +I Y G ++
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVE 241
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF DML QP++ +++LSAC+ G G + +S+ +VD+
Sbjct: 242 LFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQ-LHSLALRLGLESDSCVSCGLVDMY 300
Query: 579 ARAGR---LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK--KMLE--LHP 631
A++ L A E MP + +V + A L G D +VMI KML + P
Sbjct: 301 AKSHNGQSLHNAREVFNRMP-KHNVMAWTALLSGYVQRGSQD-NQVMILFCKMLNEGIRP 358
Query: 632 DKACYYVLV---SNLYASD-GRWIRVNQVR 657
+ Y ++ +NL D GR I + V+
Sbjct: 359 NHITYSSMLKACANLGDQDSGRQIHTHCVK 388
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 103/256 (40%), Gaps = 39/256 (15%)
Query: 446 VQVGSSLHAYSTKQG-LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE--KNTVTWSA 502
+ +G +L + + G LL ++ V +LL Y+KC +AR VFD M ++ V+W+A
Sbjct: 63 IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC--------SHTGMVGEGWKC 554
M G +L LF + L E + PN AC + ++G +K
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182
Query: 555 FY----------------------SMCRDFK--FVPSMKHYVCMVDLLARAGRLEEALEF 590
+ +M R F F ++ + ++ A++G +EA+E
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVEL 242
Query: 591 MENM---PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYAS 646
+M +PD + L C F LG+ + L L + +C + ++YA
Sbjct: 243 FLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAK 302
Query: 647 DGRWIRVNQVRELMKQ 662
++ RE+ +
Sbjct: 303 SHNGQSLHNAREVFNR 318
>gi|357495605|ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 210/618 (33%), Positives = 349/618 (56%), Gaps = 30/618 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++MY S H +YA +VFD M + ++ +I + + Y VE + M +
Sbjct: 162 LLNMYASCQH-EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPS 220
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGG---PDSFVLTGLVDMYAKCRDIGSSRQV 202
F + A +L D + + K G D FV++ + M++ + +R V
Sbjct: 221 PVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMV 280
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG--NQITLGSLVTACAKLR 260
FD L+KN W +MI YVQN+C E + +F + E EG + +TL S++TA ++L+
Sbjct: 281 FDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALES-EEGVCDDVTLLSVLTAVSQLQ 339
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ + H +++K ++ A++ MY +C ++ + VFD++ D VSW +I
Sbjct: 340 QIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIIS 399
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
+ Q+G+ ++AL L + + F + VT ++LSA++ L NL +G+ H+ IR G++
Sbjct: 400 AFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQF 459
Query: 381 YTVINALVDMYAKCHVIADARYIFET--TSEKDVIAWNSIISG----------------- 421
+ + L+DMYAK I A +FE +S++D WN+II+G
Sbjct: 460 EGMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQM 519
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
L NV P+AVTL S++ AC+S+G++ + LH +S ++ L NVYVGT+L + Y+KCG
Sbjct: 520 LVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRR-FLEKNVYVGTSLTDTYSKCGA 578
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A VF EKN+VT++ M+ YG G G +L L+ ML ++P+ V F ILSA
Sbjct: 579 ISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSA 638
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD-V 600
C+++G+V EG + F SM + K PS++HY C+ D+L R GR+ EA EF++ + + + +
Sbjct: 639 CNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTM 698
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK--ACYYVLVSNLYASDGRWIRVNQVRE 658
++G+ L C + F+LG+ + KK+L + DK A Y+VL+SN+YA +G W +V++VR+
Sbjct: 699 EIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRK 758
Query: 659 LMKQRGLSKSPGCSLVDL 676
MK++GL K GCS V++
Sbjct: 759 QMKEKGLHKETGCSWVEI 776
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 167/636 (26%), Positives = 284/636 (44%), Gaps = 71/636 (11%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR--LKEHDNFVFSK 151
G A + DS+P P + +I + N+L + Y MR D + FS
Sbjct: 63 GQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSS 122
Query: 152 VLKACCELRDIDEGMKVHCEIVKV-----GGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
LKAC +DI G +H ++ GP V L++MYA C+ + VFD
Sbjct: 123 TLKACALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMYASCQH-EYALNVFDVM 181
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+NVV+W ++I +V+ + + + F M V + +T +L A +KL K
Sbjct: 182 RRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVK 241
Query: 267 WLHGYILKIGIEINSH--LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+G++ K G + S +V++ + M+ G + AR VFD + + W MIV Y Q
Sbjct: 242 MFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQ 301
Query: 325 SGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LGLEDYT 382
+ P +A+ +F + + + VT+ SVL+A +QL + + H+ I+ L
Sbjct: 302 NNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLII 361
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDNVSP--------- 428
++NA++ MY++C+ + + +F+ E+D ++WN+IIS G D+
Sbjct: 362 ILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQK 421
Query: 429 ---DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
D+VT +++SA ++L + VG HAY ++G+ + + L++ YAK G ++A
Sbjct: 422 FLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEG--MESYLIDMYAKSGSIRTA 479
Query: 486 RMVFDA--MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
++F+ +++ TW+A+I GY G ++ L ML + V PN V +IL ACS
Sbjct: 480 ELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACS 539
Query: 544 HTG---------------------MVGEGWKCFYSMCRDFKFVPSM---------KHYVC 573
G VG YS C + ++ Y
Sbjct: 540 SMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTT 599
Query: 574 MVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
M+ + G + AL ++M I PD F A L C D G + + M ++H
Sbjct: 600 MMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVH 659
Query: 631 PDKAC--YYVLVSNLYASDGRWIRVNQVRELMKQRG 664
K +Y V+++ GR RV + E +K G
Sbjct: 660 KIKPSIEHYCCVADML---GRVGRVVEAYEFVKGLG 692
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 3/194 (1%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDS--MPNPDFYSFQVMIRWYFL 123
K HA LI G+ + + L+ MY G ++ A +F+ + D ++ +I Y
Sbjct: 446 KQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQ 505
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFV 182
N L + + K M + + + +L AC + + ++H I + + +V
Sbjct: 506 NGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYV 565
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L D Y+KC I + VF T +KN V++T+M+ Y Q+ + L L++ M +
Sbjct: 566 GTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGI 625
Query: 243 EGNQITLGSLVTAC 256
+ +T ++++AC
Sbjct: 626 RPDAVTFVAILSAC 639
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C S GS+ + H I L N T L Y G + YA +VF P
Sbjct: 533 SILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEK 592
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ ++ M+ Y + + K + Y M + D F +L AC +DEG+++
Sbjct: 593 NSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIF 652
Query: 170 CEIVKV 175
+ KV
Sbjct: 653 ESMEKV 658
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/621 (32%), Positives = 325/621 (52%), Gaps = 90/621 (14%)
Query: 145 DNFVFSKVLKACCELRDIDEGMK-VHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQV 202
D+ F+K+L +C + + ++ VH ++K G + F+ L+D Y+KC + RQV
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 203 FDETLDKNV-------------------------------VSWTSMIAGYVQNDCAQEGL 231
FD+ +N+ +W SM++G+ Q+D +E L
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 232 VLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
F M +EGFV N+ + S+++AC+ L +++G +H I K + ++ +AL+DM
Sbjct: 138 CYFAMMHKEGFVL-NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KCGN+ DA+ VFDE+ ++VSW ++I + Q+G +AL +F + P+ VT+
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETT- 407
ASV+SA A L + +G+ VH ++ D + NA VDMYAKC I +AR+IF++
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 408 ------------------------------SEKDVIAWNSIISGLDDN------------ 425
+E++V++WN++I+G N
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL-----SSNVYVGTALLNF 475
V P + +++ ACA L + +G H + K G +++VG +L++
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
Y KCG + +VF M E++ V+W+AMI G+ G G +L LF +ML +P+ +
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+LSAC H G V EG F SM RDF P HY CMVDLL RAG LEEA +E MP
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
++PD ++G+ L C ++ LG+ + +K+LE+ P + YVL+SN+YA G+W V
Sbjct: 557 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616
Query: 656 VRELMKQRGLSKSPGCSLVDL 676
VR+ M++ G++K PGCS + +
Sbjct: 617 VRKSMRKEGVTKQPGCSWIKI 637
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 158/554 (28%), Positives = 268/554 (48%), Gaps = 98/554 (17%)
Query: 49 SIPCLNLLGLC-KSTGS---LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVF 103
S P LL C KS S ++ HA +I G +N+ +L+ Y G ++ R VF
Sbjct: 19 SSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 104 DSMPNPDFYSFQVMI----RWYFLND---LYKDIVEFYKC----MRKRLKEHD------- 145
D MP + Y++ ++ + FL++ L++ + E +C M +HD
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 146 -------------NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDM 189
+ F+ VL AC L D+++G++VH I K P D ++ + LVDM
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK--SPFLSDVYIGSALVDM 196
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y+KC ++ +++VFDE D+NVVSW S+I + QN A E L +F M E VE +++TL
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT-ALLDMYVKCGNIRDARSVFD--- 305
S+++ACA L A+ G+ +HG ++K N +++ A +DMY KC I++AR +FD
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 306 ----------------------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
++ ++VSW A+I GYTQ+G ++AL LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-------EDYTVINALVDM 390
K P H + A++L A A L L++G H ++ G +D V N+L+DM
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTL 433
Y KC + + +F E+D ++WN++I G L+ PD +T+
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+ V+SAC G V+ G + T+ ++ T +++ + G + A+ + + M
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 494 -EKNTVTWSAMIGG 506
+ ++V W +++
Sbjct: 557 MQPDSVIWGSLLAA 570
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 206/612 (33%), Positives = 333/612 (54%), Gaps = 23/612 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLK 142
T LV Y F V R VF M + S+ +I + + D K + + Y M
Sbjct: 201 TALVGFYMRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKAL-KLYSSMLIEGI 258
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ D V++AC E + GM++H +K D F+L L++MY+ + SS
Sbjct: 259 KFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWA 318
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR- 260
+F+ + W SMI+ Y+ E + LF +MR ++ + T+ +++ C L
Sbjct: 319 LFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLND 378
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
G+ LH + +K GIE++++L ALL MYVK I A+ VF+++ +D++SW MI
Sbjct: 379 GSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMIS 438
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
+ QS + KA +LF ++ N TI S+L+ +L GR +H I+ GLE
Sbjct: 439 AFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEI 498
Query: 381 YTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--DDN------------ 425
T +N +L +MY C A +F ++D+++WNS+IS +DN
Sbjct: 499 NTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI 558
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL-LSSNVYVGTALLNFYAKCGDA 482
+ P++VT+++++++C L + +G LHAY+T++ + L + + A + YA+CG
Sbjct: 559 SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKL 618
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
Q A +F ++ ++ V+W+AMI GYGM G G + F+ ML++ +PN V F ++LSAC
Sbjct: 619 QYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSAC 678
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH+G+ G + F+SM RDF P + HY CMVDLL R G EA+ F+ +MPIEPD S+
Sbjct: 679 SHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASI 738
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ A L C + S L E + K++EL P ++L+SN+YA+ G W V Q+R+ +++
Sbjct: 739 WRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRE 798
Query: 663 RGLSKSPGCSLV 674
RGL K PG S +
Sbjct: 799 RGLGKPPGTSWI 810
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 171/641 (26%), Positives = 306/641 (47%), Gaps = 40/641 (6%)
Query: 35 HELDQTFASFHSLPSIP-------CLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKL 86
H + T+ SL P L G + G+ H+ + L ND + T L
Sbjct: 42 HAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTAL 101
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
V Y G V A VF MP D S+ +I Y YK+ V + M+K ++
Sbjct: 102 VDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNS 161
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+L AC E+ ++ G ++H ++ G D++V T LV Y + + S R VF
Sbjct: 162 RTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHR-VFS 220
Query: 205 ETLDKNVVSWTSMIAGYVQ-NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
L +N+VSW ++I G++ DCA+ L L++ M ++ + +T+ ++ ACA+ L
Sbjct: 221 LMLVRNIVSWNAIITGFLNVGDCAK-ALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLR 279
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G LH +K + + ++ ALL+MY G++ + ++F+ + + D W +MI Y
Sbjct: 280 LGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYI 339
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM-GRMVHSLGIRLGLE-DY 381
G+ +A+ LF + + TIA +LS L + ++ GR +H+ ++ G+E D
Sbjct: 340 GFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDA 399
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DD 424
+ NAL+ MY K + I A+Y+FE DVI+WN++IS +
Sbjct: 400 YLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCES 459
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ ++ T+VS+++ C + G S+H ++ K G L N + T+L Y CGD ++
Sbjct: 460 EIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNG-LEINTSLNTSLTEMYINCGDERA 518
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A +F +++ V+W+++I Y + G +L LF+ M++ E++PN V IL++C+
Sbjct: 519 ATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQ 577
Query: 545 TGMVGEGWKCF--YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+ G +C Y+ R+ + + AR G+L+ A + + VS
Sbjct: 578 LAHLPLG-QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVS- 635
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ A + G G++ R + +ML+ P+ + ++S
Sbjct: 636 WNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLS 676
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 176/349 (50%), Gaps = 21/349 (6%)
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W S+I + + L + +M + + T+ ++ AC +L A+ G +H +I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSFIR 87
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
+ + + + TAL+D Y KCG + +A VF E+ DLVSW A+I GY +A+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMY 391
LF + K A PN T+ ++L A ++ L +G+ +H +R GL D V ALV Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLV 434
+ + R +F +++++WN+II+G L + + DAVT++
Sbjct: 208 MRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
VI ACA G +++G LH + K L+ +++++ ALLN Y+ G +S+ +F+A+
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIKFNLI-NDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ W++MI Y G ++ALF M E ++ + +LS C+
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCN 374
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 211/636 (33%), Positives = 337/636 (52%), Gaps = 35/636 (5%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA I GL +N + LVSMY ++ A VF+++ + + MIR Y N
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGES 409
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++E + M+ D+F F+ +L C D++ G + H I+K + FV L
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNAL 469
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VDMYAKC + +RQ+F+ D++ VSW ++I GYVQ++ E LF RM + +
Sbjct: 470 VDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDG 529
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
L S + AC + L+QGK +H +K G++ H ++L+DMY KCG I DAR VF
Sbjct: 530 ACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSS 589
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ +VS A+I GY+Q+ ++A+ LF + P+ +T A+++ A + +L +G
Sbjct: 590 MPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLG 648
Query: 367 RMVHSLGIRLGLE---DYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGL 422
H I+ G +Y I +L+ +Y +A+A +F E +S K ++ W ++SG
Sbjct: 649 TQFHGQIIKWGFSSEGEYLGI-SLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGH 707
Query: 423 DDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA--YSTKQGL-- 461
N PD T V+V+ C+ L +++ G ++H+ + L
Sbjct: 708 SQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALF 520
L+SN L++ YAKCGD +S+ VFD MR + N V+W+++I GY G +L +F
Sbjct: 768 LTSNT-----LIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
M + P+E+ F +L+ACSH G V +G K F M + + H CMVDLL R
Sbjct: 823 DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGR 882
Query: 581 AGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
G L+EA +F+E ++PD L+ + L C ++ GE+ ++++EL P + YVL+
Sbjct: 883 WGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELEPQNSSAYVLL 942
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
SN+YAS GRW N +R+ M+ RG+ K PG S +D+
Sbjct: 943 SNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDV 978
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 167/597 (27%), Positives = 285/597 (47%), Gaps = 38/597 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++ Y S G +K AR +F MP+PD ++ VMI + +E++ MRK +
Sbjct: 267 VINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKST 326
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
VL A + ++D G+ VH E +K+G + +V + LV MY+KC + ++ +VF+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++N V W +MI GY N + + + LF M+ + T SL++ CA L
Sbjct: 387 ALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEM 446
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G H I+K + N + AL+DMY KCG + DAR +F+ +C D VSW +I GY Q
Sbjct: 447 GSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQ 506
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-V 383
+A LF + +AS L A + L G+ VH L ++ GL+
Sbjct: 507 DENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHT 566
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------VS 427
++L+DMY+KC +I DAR +F + E V++ N++I+G N V+
Sbjct: 567 GSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTKGVN 626
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P +T +++ AC ++ +G+ H K G S Y+G +LL Y A
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACA 686
Query: 488 VFDAMRE-KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F + K+ V W+ M+ G+ G +L + +M ++ P++ F T+L CS
Sbjct: 687 LFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLS 746
Query: 547 MVGEG---WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
+ EG + + D + S ++D+ A+ G ++ + + + M +V +
Sbjct: 747 SLREGRAIHSLIFHLAHDLDELTSNT----LIDMYAKCGDMKSSSQVFDEMRRRSNVVSW 802
Query: 604 GAFLHGCGLYSRFDLGEVMIK---KMLELH--PDKACYY-VLVSNLYA---SDGRWI 651
+ ++G Y++ E +K M + H PD+ + VL + +A SDGR I
Sbjct: 803 NSLING---YAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/607 (27%), Positives = 296/607 (48%), Gaps = 82/607 (13%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
KA H+ ++ G+ ++ + +V +Y V YA F+S+ + W +
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEKD-------VTAWNSML 132
Query: 125 DLYKDIVEFYKCMRKRLKEHDN------FVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
+Y I + K +R + +N F FS VL +++ G ++HC ++K+G
Sbjct: 133 SMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLE 192
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
+S+ LVDMYAKC +G +++VFD +D N V WT + +GYV+ +E +++F RM
Sbjct: 193 RNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERM 252
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R EG++ + VT +++ Y+ G +
Sbjct: 253 RG---EGHRPDHLAFVT--------------------------------VINTYISLGKL 277
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+DAR +F E+ S D+V+W MI G+ + G A++ F + + + T+ SVLSA
Sbjct: 278 KDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAI 337
Query: 358 AQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ NL++G +VH+ I+LGL + V ++LV MY+KC + A +FE E++ + WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWN 397
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I G N + D T S++S CA +++GS H+ K+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKK 457
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L+ N++VG AL++ YAKCG + AR +F+ M +++ V+W+ +IGGY + + L
Sbjct: 458 K-LTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDL 516
Query: 520 FSDMLNEEVQPNEVIFTTILSACS--HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
F M + + + + L AC+ H G+ C C + + + ++D+
Sbjct: 517 FMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGS---SLIDM 573
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE--VMIKKMLE--LHPDK 633
++ G +E+A + +MP E V A + G YS+ +L E V+ ++ML ++P +
Sbjct: 574 YSKCGIIEDARKVFSSMP-EWSVVSMNALIAG---YSQNNLEEAVVLFQEMLTKGVNPSE 629
Query: 634 ACYYVLV 640
+ +V
Sbjct: 630 ITFATIV 636
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 186/656 (28%), Positives = 294/656 (44%), Gaps = 97/656 (14%)
Query: 66 KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H +I GL N C LV MY + A+ VFD + +P+ + + Y
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKA 239
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT 184
L ++ V ++ MR EG + PD
Sbjct: 240 GLPEEAVIVFERMR------------------------GEGHR----------PDHLAFV 265
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
+++ Y + +R +F E +VV+W MI+G+ + C + F MR+ V+
Sbjct: 266 TVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKS 325
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ TLGS+++A + L G +H +K+G+ N ++ ++L+ MY KC + A VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ L + V W AMI GY +G K ++LF D K + + + T S+LS A +L
Sbjct: 386 EALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLE 445
Query: 365 MGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
MG HS+ I+ L ++ V NALVDMYAKC + DAR IFE ++D ++WN+II G
Sbjct: 446 MGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYV 505
Query: 423 -DDNVSP---------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
D+N S D L S + AC ++ + G +H S K G L +
Sbjct: 506 QDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCG-LDRVL 564
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ G++L++ Y+KCG + AR VF +M E + V+ +A+I GY Q + ++ LF +ML +
Sbjct: 565 HTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTK 623
Query: 527 EVQPNEVIFTTILSACSHT----------------GMVGEGWKCFYSM------------ 558
V P+E+ F TI+ AC G EG S+
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAE 683
Query: 559 -CRDFKFVPSMKHYVCMVDLL---ARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCG 611
C F + S K V ++ ++ G EEAL+F + M + PD + F L C
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCS 743
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSN----LYASDGRWIRVNQVRELMKQR 663
+ S G + + L D L SN +YA G +QV + M++R
Sbjct: 744 VLSSLREGRAIHSLIFHLAHD---LDELTSNTLIDMYAKCGDMKSSSQVFDEMRRR 796
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/477 (28%), Positives = 236/477 (49%), Gaps = 62/477 (12%)
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G VH + + +G + + +VD+YAKC + + + F+ +L+K+V +W SM++ Y
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFN-SLEKDVTAWNSMLSMY-- 135
Query: 224 NDCAQEGLVL--FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
+ Q G VL F + E + N+ T +++ A+ + G+ +H ++K+G+E NS
Sbjct: 136 SSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNS 195
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ AL+DMY KC + DA+ VFD + + V WT + GY ++G P++A+ +F +
Sbjct: 196 YCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGE 255
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADAR 401
P+H+ +V++ LG L DAR
Sbjct: 256 GHRPDHLAFVTVINTYISLGKLK----------------------------------DAR 281
Query: 402 YIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLG 444
+F DV+AWN +ISG +V TL SV+SA +
Sbjct: 282 LLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+ +G +HA + K G L+SN+YVG++L++ Y+KC ++A VF+A+ E+N V W+AMI
Sbjct: 342 NLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMI 400
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GY G+ + LF DM + ++ FT++LS C+ + + G + F+S+ K
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQ-FHSIIIKKKL 459
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS---LFGAFLHGCGLYSRFDL 618
++ +VD+ A+ G LE+A + E+M +VS + G ++ FDL
Sbjct: 460 TKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDL 516
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 157/352 (44%), Gaps = 27/352 (7%)
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
AL GK +H L +GI+ L A++D+Y KC + A F+ L D+ +W +M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLS 133
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
Y+ G P K L+ F FPN T + VLS SA+ N+ GR +H I++GLE
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193
Query: 381 YTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISA 439
+ ALVDMYAKC + DA+ +F+ + + + W + SG P+
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEE--------- 244
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
AV V + + L+ ++N Y G + AR++F M + V
Sbjct: 245 -----AVIVFERMRGEGHRPDHLAF-----VTVINTYISLGKLKDARLLFGEMPSPDVVA 294
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+ MI G+G +G ++ F +M V+ ++LSA G+V
Sbjct: 295 WNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSA---IGIVANLDLGLVVHA 351
Query: 560 RDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
K + YV +V + ++ ++E A + E + DV L+ A + G
Sbjct: 352 EAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDV-LWNAMIRG 402
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 206/612 (33%), Positives = 333/612 (54%), Gaps = 23/612 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLK 142
T LV Y F V R VF M + S+ +I + + D K + + Y M
Sbjct: 201 TALVGFYMRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKAL-KLYSSMLIEGI 258
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ D V++AC E + GM++H +K D F+L L++MY+ + SS
Sbjct: 259 KFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWA 318
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR- 260
+F+ + W SMI+ Y+ E + LF +MR ++ + T+ +++ C L
Sbjct: 319 LFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLND 378
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
G+ LH + +K GIE++++L ALL MYVK I A+ VF+++ +D++SW MI
Sbjct: 379 GSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMIS 438
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
+ QS + KA +LF ++ N TI S+L+ +L GR +H I+ GLE
Sbjct: 439 AFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEI 498
Query: 381 YTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--DDN------------ 425
T +N +L +MY C A +F ++D+++WNS+IS +DN
Sbjct: 499 NTSLNTSLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMI 558
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL-LSSNVYVGTALLNFYAKCGDA 482
+ P++VT+++++++C L + +G LHAY+T++ + L + + A + YA+CG
Sbjct: 559 SELEPNSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKL 618
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
Q A +F ++ ++ V+W+AMI GYGM G G + F+ ML++ +PN V F ++LSAC
Sbjct: 619 QYAEKIFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSAC 678
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH+G+ G + F+SM RDF P + HY CMVDLL R G EA+ F+ +MPIEPD S+
Sbjct: 679 SHSGLTVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASI 738
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ A L C + S L E + K++EL P ++L+SN+YA+ G W V Q+R+ +++
Sbjct: 739 WRALLSSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRE 798
Query: 663 RGLSKSPGCSLV 674
RGL K PG S +
Sbjct: 799 RGLGKPPGTSWI 810
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 171/641 (26%), Positives = 306/641 (47%), Gaps = 40/641 (6%)
Query: 35 HELDQTFASFHSLPSIP-------CLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKL 86
H + T+ SL P L G + G+ H+ + L ND + T L
Sbjct: 42 HAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTAL 101
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
V Y G V A VF MP D S+ +I Y YK+ V + M+K ++
Sbjct: 102 VDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNS 161
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+L AC E+ ++ G ++H ++ G D++V T LV Y + + S R VF
Sbjct: 162 RTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFYMRFDAVLSHR-VFS 220
Query: 205 ETLDKNVVSWTSMIAGYVQ-NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
L +N+VSW ++I G++ DCA+ L L++ M ++ + +T+ ++ ACA+ L
Sbjct: 221 LMLVRNIVSWNAIITGFLNVGDCAK-ALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLR 279
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G LH +K + + ++ ALL+MY G++ + ++F+ + + D W +MI Y
Sbjct: 280 LGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYI 339
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM-GRMVHSLGIRLGLE-DY 381
G+ +A+ LF + + TIA +LS L + ++ GR +H+ ++ G+E D
Sbjct: 340 GFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAMKSGIELDA 399
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DD 424
+ NAL+ MY K + I A+Y+FE DVI+WN++IS +
Sbjct: 400 YLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCES 459
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ ++ T+VS+++ C + G S+H ++ K G L N + T+L Y CGD ++
Sbjct: 460 EIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNG-LEINTSLNTSLTEMYINCGDERA 518
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A +F +++ V+W+++I Y + G +L LF+ M++ E++PN V IL++C+
Sbjct: 519 ATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHMIS-ELEPNSVTIINILTSCTQ 577
Query: 545 TGMVGEGWKCF--YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+ G +C Y+ R+ + + AR G+L+ A + + VS
Sbjct: 578 LAHLPLG-QCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTLQTRSIVS- 635
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ A + G G++ R + +ML+ P+ + ++S
Sbjct: 636 WNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLS 676
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 175/349 (50%), Gaps = 21/349 (6%)
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W S+I + + L + +M + + T+ ++ AC +L A+ G +H I
Sbjct: 28 WNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGNGVRIHSCIR 87
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
+ + + + TAL+D Y KCG + +A VF E+ DLVSW A+I GY +A+
Sbjct: 88 GLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVGCLCYKEAVL 147
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMY 391
LF + K A PN T+ ++L A ++ L +G+ +H +R GL D V ALV Y
Sbjct: 148 LFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFDMDAYVGTALVGFY 207
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLV 434
+ + R +F +++++WN+II+G L + + DAVT++
Sbjct: 208 MRFDAVLSHR-VFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTML 266
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
VI ACA G +++G LH + K L+ +++++ ALLN Y+ G +S+ +F+A+
Sbjct: 267 VVIQACAEYGCLRLGMQLHQLAIKFNLI-NDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ W++MI Y G ++ALF M E ++ + +LS C+
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCN 374
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 205/608 (33%), Positives = 321/608 (52%), Gaps = 78/608 (12%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+F VLKAC EL G H I G + F+ LV MY++C + + +F
Sbjct: 9 DHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIF 68
Query: 204 DETLDK---NVVSWTSMIAGYVQNDCAQEGLVLFNRM------REGFVEGNQITLGSLVT 254
DE + +V+SW S+++ +V++ A L LF++M + + I++ +++
Sbjct: 69 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 128
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD--------- 305
AC L+A+ Q K +HG ++ G ++ + AL+D Y KCG + +A VF+
Sbjct: 129 ACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 188
Query: 306 --------------------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
E +D+V+WTA+I GY+Q G +AL +F
Sbjct: 189 WNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMI 248
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-----------EDYTVINALV 388
++ PN VTI SVLSA A LG + G +H+ ++ L ED V NAL+
Sbjct: 249 FSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 308
Query: 389 DMYAKCHVIADARYIFETT--SEKDVIAWNSIISGL----DDN---------------VS 427
DMY+KC AR IF+ E++V+ W +I G D N V+
Sbjct: 309 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 368
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALLNFYAKCGDAQSAR 486
P+A T+ ++ ACA L A+++G +HAY + S+ Y V L+N Y+KCGD +AR
Sbjct: 369 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTAR 428
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD+M +K+ ++W++M+ GYGM G G +L +F M P+++ F +L ACSH G
Sbjct: 429 HVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCG 488
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
MV +G F SM D+ P +HY +DLLAR GRL++A + +++MP+EP ++ A
Sbjct: 489 MVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVAL 548
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++S +L E + K++E++ + Y L+SN+YA+ GRW V ++R LMK+ G+
Sbjct: 549 LSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIK 608
Query: 667 KSPGCSLV 674
K PGCS V
Sbjct: 609 KRPGCSWV 616
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 159/569 (27%), Positives = 259/569 (45%), Gaps = 91/569 (15%)
Query: 46 SLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVF 103
+LP + L G S AFH L+ +G ++ CN LV+MY G ++ A +F
Sbjct: 12 TLPHV--LKACGELPSYRCGSAFHGLICCNGFESNVFICNA-LVAMYSRCGSLEEASMIF 68
Query: 104 DSMPN---PDFYSFQVMIRWYFLNDLYKDIVEFYKCM-----RKRLKEHDNFV-FSKVLK 154
D + D S+ ++ + + ++ + M K E + + +L
Sbjct: 69 DEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILP 128
Query: 155 ACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFD--------- 204
AC L+ + + +VH ++ G D FV L+D YAKC + ++ +VF+
Sbjct: 129 ACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVS 188
Query: 205 --------------------------ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
E + ++V+WT++IAGY Q C+ E L +F +M
Sbjct: 189 WNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMI 248
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK---------IGIEINSHLV-TALL 288
N +T+ S+++ACA L A QG +H Y LK G E +V AL+
Sbjct: 249 FSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALI 308
Query: 289 DMYVKCGNIRDARSVFDE--LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF--F 344
DMY KC + + ARS+FD+ L ++V+WT MI G+ Q G + ALKLF + +
Sbjct: 309 DMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVA 368
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED---YTVINALVDMYAKCHVIADAR 401
PN TI+ +L A A L + +G+ +H+ +R D Y V N L++MY+KC + AR
Sbjct: 369 PNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTAR 428
Query: 402 YIFETTSEKDVIAWNSIISG----------LD-------DNVSPDAVTLVSVISACASLG 444
++F++ S+K I+W S+++G LD PD +T + V+ AC+ G
Sbjct: 429 HVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCG 488
Query: 445 AVQVG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSA 502
V G S + S GL + A ++ A+ G A + V D E V W A
Sbjct: 489 MVDQGLSYFDSMSADYGLTPRAEHYAYA-IDLLARFGRLDKAWKTVKDMPMEPTAVVWVA 547
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
++ + + + L LN+ V+ N
Sbjct: 548 LLSACRVHSN----VELAEHALNKLVEMN 572
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 142/339 (41%), Gaps = 36/339 (10%)
Query: 15 KKPKLQLRFFSYTN-----QQTPTQHELDQTFASFHSLPSIP-CLNLLGLCKSTGSLKAF 68
+K + L ++T Q HE F S+P C+ ++ + + SL AF
Sbjct: 213 RKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAF 272
Query: 69 HALLIVDGLTNDKC-----------------NTKLVSMYGSFGHVKYARSVFDSMP--NP 109
+ + + C L+ MY K ARS+FD +P
Sbjct: 273 SQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEER 332
Query: 110 DFYSFQVMI----RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ ++ VMI ++ ND K VE + + S +L AC L I G
Sbjct: 333 NVVTWTVMIGGHAQYGDSNDALKLFVEMIS--EPYGVAPNAYTISCILMACAHLAAIRIG 390
Query: 166 MKVHCEIVKVGGPDS---FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
++H +++ DS FV L++MY+KC D+ ++R VFD K+ +SWTSM+ GY
Sbjct: 391 KQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG 450
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINS 281
+ E L +F++MR+ + IT ++ AC+ + QG + G+ +
Sbjct: 451 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 510
Query: 282 HLVTALLDMYVKCGNIRDA-RSVFDELCSIDLVSWTAMI 319
+D+ + G + A ++V D V W A++
Sbjct: 511 EHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALL 549
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 206/633 (32%), Positives = 330/633 (52%), Gaps = 52/633 (8%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
K H +++V G D NT LV MY ++ +FD +P + S+ + Y
Sbjct: 177 KQVHGVVVVSGFEGDVFVANT-LVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQ 235
Query: 124 NDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSF 181
D + V FY+ + +K ++ F S ++ AC LRD G +H ++K+G D F
Sbjct: 236 XDFCGEAVGLFYEMVLSGIKPNE-FSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPF 294
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
LVDMYAK D+ + VF++ ++VSW ++IAG V ++ ++ L L +M+
Sbjct: 295 SANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK--- 351
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ LH ++K+ +E + + L+DMY KC + DAR
Sbjct: 352 ------------------------RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDAR 387
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
F+ L DL++W A+I GY+Q +AL LF + N T++++L ++A L
Sbjct: 388 MAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQ 447
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+++ R VH L ++ G D V+N+L+D Y KC + DA IFE + D++++ S+I+
Sbjct: 448 VVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMIT 507
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
D + PD S+++ACA+L A + G LH + K G +
Sbjct: 508 AYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVL 567
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+++ G +L+N YAKCG A F + E+ V+WSAMIGG G G +L LF+ M
Sbjct: 568 -DIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQM 626
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
L E V PN + ++L AC+H G+V E F SM F F P +HY CM+DLL RAG+
Sbjct: 627 LKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGK 686
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
+ EA+E + MP E + S++GA L ++ +LG + + L P+K+ +VL++N+
Sbjct: 687 INEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANI 746
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YAS G+W V +VR LM+ + K PG S +++
Sbjct: 747 YASAGKWENVAEVRRLMRDSKVKKEPGMSWIEV 779
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 188/608 (30%), Positives = 305/608 (50%), Gaps = 58/608 (9%)
Query: 6 LLQR-HVSRTKKPKL--QLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKST 62
L QR H+ PKL + FS Q T + +D+ +F + S+ LL C +T
Sbjct: 13 LHQRLHLPFKPAPKLIQTVPQFSEDPQTTAILNLIDK--GNF-TPTSVSYSKLLSQCCTT 69
Query: 63 GSLKA---FHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
SL+ HA + GL++D L+++Y YAR + D PD S+ +I
Sbjct: 70 KSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALI 129
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
Y N L + + M + + F FS VLKAC ++D+ G +VH +V G
Sbjct: 130 SGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE 189
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FV LV MYAKC + S+++FDE ++NVVSW ++ + YVQ D E + LF M
Sbjct: 190 GDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEM 249
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
++ N+ +L S+V AC LR +GK +HGY++K+G + + AL+DMY K G++
Sbjct: 250 VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDL 309
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
DA SVF+++ D+VSW A+I G + ++AL+L
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLG--------------------- 348
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
M R +HS +++ +E D V LVDMY+KC ++ DAR F EKD+IAWN
Sbjct: 349 ------QMKRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWN 402
Query: 417 SIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+IISG + + + TL +++ + A L V V +H S K
Sbjct: 403 AIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS 462
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G S++YV +L++ Y KC + A +F+ + V++++MI Y G G +L L
Sbjct: 463 G-FHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKL 521
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F +M + E++P+ + +++L+AC++ +G K + + FV + +V++ A
Sbjct: 522 FLEMQDMELKPDRFVCSSLLNACANLSAFEQG-KQLHVHILKYGFVLDIFAGNSLVNMYA 580
Query: 580 RAGRLEEA 587
+ G +++A
Sbjct: 581 KCGSIDDA 588
Score = 234 bits (598), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 155/534 (29%), Positives = 275/534 (51%), Gaps = 54/534 (10%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+SK+L CC + + G+++H I K G D + L+++Y+KCR G +R++ DE+
Sbjct: 59 YSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESS 118
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+ ++VSW+++I+GY QN L+ F+ M V+ N+ T S++ AC+ ++ L GK
Sbjct: 119 EPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQ 178
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG ++ G E + + L+ MY KC D++ +FDE+ ++VSW A+ Y Q +
Sbjct: 179 VHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDF 238
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
+A+ LF + + PN +++S+++A L + + G+++H I+LG + D NA
Sbjct: 239 CGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANA 298
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAV 446
LVDMYAK +ADA +FE + D+++WN++I+G V A LG
Sbjct: 299 LVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAG--------CVLHEHHEQALELLG-- 348
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
Q+ LH+ K + S+++V L++ Y+KC + ARM F+ + EK+ + W+A+I G
Sbjct: 349 QMKRQLHSSLMKMD-MESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISG 407
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEGW--- 552
Y + +L+LF +M E + N+ +TIL + + H V G+
Sbjct: 408 YSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSD 467
Query: 553 ------------KCFYSMCRDFKF----VPSMKHYVCMVDLLARAGRLEEALEF---MEN 593
KC + + F + + + M+ A+ G+ EEAL+ M++
Sbjct: 468 IYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQD 527
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
M ++PD + + L+ C S F+ G K L +H K Y V +++A +
Sbjct: 528 MELKPDRFVCSSLLNACANLSAFEQG-----KQLHVHILK---YGFVLDIFAGN 573
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 202/610 (33%), Positives = 321/610 (52%), Gaps = 20/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+++Y FG + A VF MP D +F +I + + +E ++ MR D
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +L AC + D+++G ++H ++K G PD + L+D+Y KC I + ++F
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
NVV W M+ Y Q + LF +M V N+ T L+ C ++
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +K G E + ++ L+DMY K G + AR + + L + D+VSWT+MI GY Q
Sbjct: 364 GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQ 423
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+ +AL+ F D + +P+++ +AS +SA A + + G+ +HS G D ++
Sbjct: 424 HEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSI 483
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
NALV++YA+C +A +FE KD I WN ++SG + V
Sbjct: 484 WNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGV 543
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ T VS ISA A+L ++ G +HA K G +S V AL++ Y KCG + A+
Sbjct: 544 KYNVFTFVSSISASANLADIKQGKQIHATVIKTGC-TSETEVANALISLYGKCGSIEDAK 602
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
M F M E+N V+W+ +I G G +L LF M E ++PN+V F +L+ACSH G
Sbjct: 603 MQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 662
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG F SM + P HY C+VD+L RAG+L+ A +F+E MP+ + ++
Sbjct: 663 LVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTL 722
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ ++GE+ K +LEL P + YVL+SN YA G+W + VR++MK RG+
Sbjct: 723 LSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVR 782
Query: 667 KSPGCSLVDL 676
K PG S +++
Sbjct: 783 KEPGRSWIEV 792
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 280/585 (47%), Gaps = 27/585 (4%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA I GL D+ L+ +Y G V+ AR VF+ + D S+ M+ Y N L
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTG 185
++ V Y M +V S VL AC + ++G VH ++ K G ++ V
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ +Y + + + +VF E + V++ ++I+ + Q + L +F MR +
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+T+ SL+ ACA + L++GK LH Y+LK G+ + + +LLD+YVKCG I +A +F
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
++V W M+V Y Q K+ LF A PN T +L G +N+
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
G +H L I+ G E D V L+DMY+K + AR I E KDV++W S+I+G
Sbjct: 364 GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQ 423
Query: 425 N-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+ + PD + L S ISACA + A++ G +H+ G S++V
Sbjct: 424 HEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG-YSADVS 482
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
+ AL+N YA+CG ++ A +F+A+ K+ +TW+ M+ G+ G +L +F M
Sbjct: 483 IWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAG 542
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
V+ N F + +SA ++ + +G K ++ + ++ L + G +E+A
Sbjct: 543 VKYNVFTFVSSISASANLADIKQG-KQIHATVIKTGCTSETEVANALISLYGKCGSIEDA 601
Query: 588 ----LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
E E + + + HG GL + DL + M ++ L+
Sbjct: 602 KMQFFEMSERNHVSWNTIITSCSQHGWGLEA-LDLFDQMKQEGLK 645
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 242/474 (51%), Gaps = 28/474 (5%)
Query: 157 CELRDIDEGMK-------VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
C LR+ +K +H + + G G D L+D+YAK + +R+VF++
Sbjct: 46 CALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSA 105
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
++ VSW +M++GY +N +E + L+++M V L S+++AC K QG+ +
Sbjct: 106 RDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLV 165
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H + K G + + AL+ +Y++ G++ A VF E+ D V++ +I + Q G
Sbjct: 166 HAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNG 225
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINAL 387
+ AL++F + + + + P+ VTIAS+L+A A +G+LN G+ +HS ++ G+ DY + +L
Sbjct: 226 ESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSL 285
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSI------ISGLDDN-----------VSPDA 430
+D+Y KC VI +A IF++ +V+ WN + IS L + V P+
Sbjct: 286 LDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNE 345
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
T ++ C G + +G +H S K G S++YV L++ Y+K G AR + +
Sbjct: 346 FTYPCLLRTCTYAGEINLGEQIHLLSIKTG-FESDMYVSGVLIDMYSKYGWLDKARRILE 404
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
+ K+ V+W++MI GY +L F DM + P+ + + +SAC+ + +
Sbjct: 405 VLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQ 464
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G + +S + + + +V+L AR GR +EA E + + ++ G
Sbjct: 465 GQQ-IHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNG 517
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 211/668 (31%), Positives = 356/668 (53%), Gaps = 30/668 (4%)
Query: 37 LDQTFASFHSLP---SIPCLNLLGLCKSTGSLKA---FHALLIVDG---LTNDKCNTKLV 87
LD AS +LP S C L C + G +A HA ++ G + C L+
Sbjct: 31 LDDELASL-ALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLL 89
Query: 88 SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
+ Y G + AR +FD MP + SF +++ Y L +++ +E ++ +++ E ++F
Sbjct: 90 NFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHF 149
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
V + +LK + +H K+G ++FV T L+D Y+ C + +R VFD
Sbjct: 150 VLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGI 209
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ K+ V+WT+M++ Y +ND + L F++MR + N L S + A L + GK
Sbjct: 210 VGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGK 269
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG +K + H+ ALLDMY KCG+I DA ++F+ + D++ W+ +I Y QS
Sbjct: 270 GIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSC 329
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
++A ++F + PN +++ VL A A + L +G +H+L I+LG E + V N
Sbjct: 330 QNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGN 389
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-DDNVSPDA-------------- 430
AL+DMYAKC + ++ IF + + + ++WN+II G + DA
Sbjct: 390 ALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLS 449
Query: 431 --VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
VT SV+ ACA+ +++ +H+ ++ +++ V +L++ YAKCG + A V
Sbjct: 450 TQVTFSSVLRACANTSSIKHAVQIHSL-IEKSTFNNDTIVCNSLIDTYAKCGFIRDALKV 508
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+++ E + V+W+++I Y + G +L LF M +++ N+V F ++LS C TG+V
Sbjct: 509 FESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLV 568
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
+G F SM D + PSM+HY C+V LL RAGRL +AL+F+ ++P P ++ A L
Sbjct: 569 NQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLS 628
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C ++ LG +K+L++ P YVL+SN+YA+ G V R+ M+ G+ K
Sbjct: 629 SCVVHKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKE 688
Query: 669 PGCSLVDL 676
G S V++
Sbjct: 689 AGLSWVEI 696
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 215/670 (32%), Positives = 341/670 (50%), Gaps = 86/670 (12%)
Query: 36 ELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFG 94
E +A F +L S L C ++ +L HA L + GL + +TKL+ Y G
Sbjct: 335 EASAEYACFFTLNSSRSLTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIG 394
Query: 95 HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH-DNFVFSKVL 153
+ ++ VFD+ P PD + + V+I+ Y +++ V Y M + + NFVF VL
Sbjct: 395 IFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVL 454
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS 213
KAC D+ VGG
Sbjct: 455 KACSGFGDLS-----------VGG------------------------------------ 467
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH--------QG 265
+N A EGL +F++M VE + +T+ S+ AC++L +L +G
Sbjct: 468 ---------KNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEG 518
Query: 266 KWLHGYILKIGIEIN-SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ +HG++++ ++ L AL+++Y GN+RD VF+ + ++SW +I +T+
Sbjct: 519 RSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTR 578
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+G P++AL LF + P+ ++AS LSA + +G +H I+ G + V
Sbjct: 579 NGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQ 638
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
NAL+DMYAKC + A +FE EK ++ WNS+I G N V
Sbjct: 639 NALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVK 698
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
D +T +SVI AC+ LG ++ G +H GL + Y+ TAL + Y+KCG+ Q A
Sbjct: 699 MDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGL-RKDSYLDTALTDMYSKCGELQMAHG 757
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VFD M E++ V+WS MI GYGM G +++LF+ ML ++PN++ F ILSACSH G
Sbjct: 758 VFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGA 817
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG K +++ +F P H+ CMVDLL+RAG L A + + ++P + S++GA L
Sbjct: 818 VEEG-KLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALL 876
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
+GC ++ R D+ + + K +L++ YY L+SN+YA +G W + +VR +MK +GL K
Sbjct: 877 NGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRK 936
Query: 668 SPGCSLVDLD 677
PG S +++D
Sbjct: 937 VPGYSTIEID 946
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 333/612 (54%), Gaps = 20/612 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+++Y G + A VF ++P ++ +I Y +E + M
Sbjct: 159 TALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVR 218
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQV 202
D FV + + AC L ++ G ++H + D+ V+ L+D+Y KC + ++R++
Sbjct: 219 PDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKL 278
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD +N+VSWT+MI+GY+QN E + +F M + + + S++ +C L A+
Sbjct: 279 FDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAI 338
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
QG+ +H +++K +E + ++ AL+DMY KC ++ +AR+VFD L D +S+ AMI GY
Sbjct: 339 WQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGY 398
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
+++ +A+ +F ++ P+ +T S+L S+ + + + +H L I+ G D
Sbjct: 399 SKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDL 458
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
+AL+D+Y+KC ++ DA+ +F KD++ WNS+I G N
Sbjct: 459 YAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLS 518
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
++P+ T V++++ ++L ++ G HA+ K G+ ++ +V AL++ YAKCG +
Sbjct: 519 GMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGV-DNDPHVSNALIDMYAKCGFIKE 577
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
RM+F++ ++ + W++MI Y G +L +F M EV+PN V F +LSAC+H
Sbjct: 578 GRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAH 637
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G VGEG F SM ++ P ++HY +V+L R+G+L A EF+E MPI+P +++
Sbjct: 638 AGFVGEGLNHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWR 697
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
+ L C L+ ++G + L P + YVL+SN+YAS G W V+ +R+ M G
Sbjct: 698 SLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSG 757
Query: 665 LSKSPGCSLVDL 676
K GCS +++
Sbjct: 758 TVKETGCSWIEV 769
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 187/515 (36%), Positives = 295/515 (57%), Gaps = 27/515 (5%)
Query: 189 MYAKCRDIGSSRQVFDETLD--KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
MYAKC + + V + T D +NV ++ ++I+G+V N Q+GL + MR+ V ++
Sbjct: 1 MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
T L+ ++ + Q K +HG + K+G++++ ++ ++L+ Y+K +++AR +FDE
Sbjct: 61 YTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDE 120
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D+V W +M+ GY Q G D+AL + + + T++ VLS A G+ + G
Sbjct: 121 IPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNG 180
Query: 367 RMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
R+VH I++G + +V NAL+DMY KC + DA IFET +EKD+ +WNSI+S
Sbjct: 181 RLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELC 240
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL----SS 464
L D V D VT+ +++ AC+ L A+ G +H Y G + S
Sbjct: 241 SDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESE 300
Query: 465 NVY---VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
N+Y AL++ YAKCG + A MVF M ++T +W+ MI GYGM G G +L +FS
Sbjct: 301 NMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFS 360
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
DM ++PNE+ F +L ACSH G + +G K M VP+++HY C++D+L RA
Sbjct: 361 DMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRA 420
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G+LEEA + MPI+ + ++ A L C LY DL EV +K+ EL+P YVL+S
Sbjct: 421 GQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVLMS 480
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
N Y + GR+ V +R M+Q+ + K+PGCS ++L
Sbjct: 481 NAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIEL 515
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 211/445 (47%), Gaps = 41/445 (9%)
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
YAR+VF ++ +I + LN L +D + Y+ MR+ D + F ++K C
Sbjct: 21 YARNVF---------AYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKYTFPCLIKGLC 71
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
E+ ++ + K+H + K+G D +V + LV Y K + +R++FDE D++VV W S
Sbjct: 72 EVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRDVVLWNS 131
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
M+ GY Q E L + M + V ++ T+ +++ A G+ +HG+++K+G
Sbjct: 132 MVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMIKMG 191
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+ + AL+DMY KC + DA +F+ + D+ SW +++ D L+LF
Sbjct: 192 FDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGTLRLF- 250
Query: 337 DKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSLGIRLG---------LEDYTVINA 386
D+ D + VTI ++L A + L L GR +H I G + + INA
Sbjct: 251 DRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTINA 310
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPD 429
L+DMYAKC + DA +F S +D +WN +I G + P+
Sbjct: 311 LMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSGLKPN 370
Query: 430 AVTLVSVISACASLGAVQVGSS-LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RM 487
+T V V+ AC+ G + G L K G++ + + T +++ + G + A ++
Sbjct: 371 EITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHY-TCVIDMLGRAGQLEEAYKL 429
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGD 512
+ N V W A++ + G+
Sbjct: 430 AVTMPIQTNPVVWRALLAACQLYGN 454
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 192/616 (31%), Positives = 342/616 (55%), Gaps = 22/616 (3%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDS--MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
CN L++MYG G + AR +FD M D S+ +I + + + ++ M++
Sbjct: 183 CNA-LIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQE 241
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGS 198
+ + F L+ + + GM +H ++K D +V L+ MYAKC +
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMED 301
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+ +VF+ L ++ VSW ++++G VQN+ + L F M+ + +Q+++ +L+ A +
Sbjct: 302 AGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGR 361
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L +GK +H Y ++ G++ N + L+DMY KC ++ F+ + DL+SWT +
Sbjct: 362 SGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTI 421
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I GY Q+ + +A+ LF + + + I SVL A + L + N R +H + L
Sbjct: 422 IAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL 481
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GL----------- 422
D + NA+V++Y + I AR FE+ KD+++W S+I+ GL
Sbjct: 482 ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSL 541
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
N+ PD++ ++S +SA A+L +++ G +H + ++G + ++L++ YA CG
Sbjct: 542 KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP-IASSLVDMYACCGT 600
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+++R +F ++++++ + W++MI GM G G ++ALF M ++ V P+ + F +L A
Sbjct: 601 VENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYA 660
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH+G++ EG + F M ++ P +HY CMVDLL+R+ LEEA F+ NMPI+P
Sbjct: 661 CSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSE 720
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ A L C ++S +LGE+ K++L+ + + Y L+SN++A+DGRW V +VR MK
Sbjct: 721 IWCALLGACHIHSNKELGELAAKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMK 780
Query: 662 QRGLSKSPGCSLVDLD 677
GL K+PGCS +++D
Sbjct: 781 GNGLKKNPGCSWIEVD 796
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 202/677 (29%), Positives = 324/677 (47%), Gaps = 50/677 (7%)
Query: 14 TKKPKLQ-LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSL---KAFH 69
T KP Q L S TP++ E HSL LL LC + +L + H
Sbjct: 23 TLKPAFQSLTLLSTHPLATPSRLE------HAHSL-------LLDLCVAAKALPQGQQLH 69
Query: 70 ALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD 129
ALL+ L+ TKLV MYG G ++ A VFD M +S+ ++ + + Y +
Sbjct: 70 ALLLKSHLS-AFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLE 128
Query: 130 IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVD 188
+E YK MR D F VLKAC L + G ++H VK G G FV L+
Sbjct: 129 AIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIA 188
Query: 189 MYAKCRDIGSSRQVFDETL--DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
MY KC D+G +R +FD + ++ VSW S+I+ +V E L LF RM+E V N
Sbjct: 189 MYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNT 248
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
T + + + G +HG +LK + ++ AL+ MY KCG + DA VF+
Sbjct: 249 YTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFES 308
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW ++ G Q+ AL F D + + P+ V++ ++++AS + GNL G
Sbjct: 309 MLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKG 368
Query: 367 RMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ VH+ IR GL+ I N LVDMYAKC + + FE EKD+I+W +II+G N
Sbjct: 369 KEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQN 428
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ D + + SV+ AC+ L + +H Y K+ L +++ +
Sbjct: 429 EFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL--ADIML 486
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
A++N Y + G AR F+++R K+ V+W++MI G +L LF + +
Sbjct: 487 QNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNI 546
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
QP+ + + LSA ++ + +G + + R F+ +VD+ A G +E +
Sbjct: 547 QPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEG-PIASSLVDMYACCGTVENSR 605
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH--PDKACYYVLVSNLYAS 646
+ ++ + D+ L+ + ++ G++ + + KKM + + PD + L LYA
Sbjct: 606 KMFHSVK-QRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLAL---LYAC 661
Query: 647 DGRWIRVNQVR--ELMK 661
+ V R E+MK
Sbjct: 662 SHSGLMVEGKRFFEIMK 678
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 209/638 (32%), Positives = 333/638 (52%), Gaps = 90/638 (14%)
Query: 88 SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
S + F H+ Y R +F+ + N + + + +MIR Y + YK M DN+
Sbjct: 20 STHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNY 79
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
+ +++AC R E +VH ++K+G D +V L++ ++ C ++ + +VF+E+
Sbjct: 80 TYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNES 139
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ VSW S++AGY++ +E ++++M E +
Sbjct: 140 SVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI------------------------ 175
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
I S+ + L M G + +A +FDE+ D+V+W+A+I + Q+
Sbjct: 176 ------------IASNSMIVLFGMR---GLVVEACKLFDEMLEKDMVTWSALIACFQQNE 220
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-N 385
++A++ F + V S LSA A L +NMG+++HSL +++G E Y + N
Sbjct: 221 MYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQN 280
Query: 386 ALVDMYAKC-------------------------------HVIADARYIFETTSEKDVIA 414
AL+ MY+KC +++ +A+ IF++ EKDV++
Sbjct: 281 ALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVS 340
Query: 415 WNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
W+S+ISG N PD TLVSVISACA L A++ G +HAY
Sbjct: 341 WSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIK 400
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
+ GL + NV +GT L++ Y KCG ++A VF M EK TW+A+I G M G SL
Sbjct: 401 RNGL-TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSL 459
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
+FS+M V PNE+ F +L AC H G+V EG FYSM D K P++KHY CMVDL
Sbjct: 460 DMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDL 519
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYY 637
L RAG+L+EA E + MP+ PDV+ +GA L C + ++G + +K++EL PD ++
Sbjct: 520 LGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFH 579
Query: 638 VLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
VL+SN+YAS G+W V ++R +M + + K PGCS+++
Sbjct: 580 VLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIE 617
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 132/265 (49%), Gaps = 5/265 (1%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S Y V A+++FDSMP D S+ MI Y NDL+ + + ++ M+ + D
Sbjct: 313 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 372
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFD 204
V+ AC L +++G VH I + G + +L T L+DMY KC + ++ +VF
Sbjct: 373 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 432
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++K + +W ++I G N + L +F+ M++ V N+IT ++ AC + + +
Sbjct: 433 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 492
Query: 265 GK-WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGY 322
G+ + I I+ N ++D+ + G +++A + + + + D+ +W A++
Sbjct: 493 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 552
Query: 323 TQSGYPDKALKLFTDKKWADFFPNH 347
+ G D + +K + P+H
Sbjct: 553 KKHG--DSEMGRRVGRKLIELQPDH 575
>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Glycine max]
Length = 750
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 213/634 (33%), Positives = 345/634 (54%), Gaps = 36/634 (5%)
Query: 67 AFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
+ HAL GL + + VS+Y G ++ AR VFD +P D ++ +I + N
Sbjct: 127 SLHALASKTGLFHS--SASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNG- 183
Query: 127 YKDIVEFYKCMRK--RLKEHDNFVFSKVLK----ACCELRDIDEGMKVHCEIVKVGGPDS 180
+ + +C+R + E D +K + AC L + EG +H +VK G S
Sbjct: 184 --EPEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVK-NGVAS 240
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
F+ + ++DMY+KC + + F E + K+++ WTS+I Y + E L LF M+E
Sbjct: 241 FIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQEN 300
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+ + + +G +++ + QGK HG I++ + + +LL MY K G + A
Sbjct: 301 EIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLA 360
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F LC W M+ GY + G K ++LF + +W + IAS +++ AQL
Sbjct: 361 ERIFP-LCQGSGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQL 419
Query: 361 GNLNMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
G +N+GR +H I+ L ++ +V N+LV+MY KC + A IF TSE DV++WN++
Sbjct: 420 GAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIF-NTSETDVVSWNTL 478
Query: 419 ISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
IS + ++ P+ TLV V+SAC+ L +++ G +H Y + G
Sbjct: 479 ISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERVHCYINESGF 538
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
+ N+ +GTAL++ YAKCG Q +RMVFD+M EK+ + W+AMI GYGM G +L +F
Sbjct: 539 -TLNLPLGTALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQ 597
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
M V PN + F ++LSAC+H G+V EG K ++ + + P++KHY CMVDLL R
Sbjct: 598 HMEESNVMPNGITFLSLLSACAHAGLVEEG-KYMFARMKSYSVNPNLKHYTCMVDLLGRY 656
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G ++EA + +MPI PD ++GA L C +++ ++G + K ++L P+ YY++++
Sbjct: 657 GNVQEAEAMVLSMPISPDGGVWGALLGHCKTHNQIEMGIRIAKYAIDLEPENDGYYIIMA 716
Query: 642 NLYASDGRWIRVNQVRELMKQR-GLSKSPGCSLV 674
N+Y+ GRW VR MK+R + K G SL+
Sbjct: 717 NMYSFIGRWEEAENVRRTMKERCSMGKKAGWSLL 750
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 215/438 (49%), Gaps = 33/438 (7%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFD-SMPNPDFYSFQVMIRWYFL 123
KAFH ++I +D K N L+ MY FG + A +F + D ++F M+ Y
Sbjct: 326 KAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIFPLCQGSGDGWNF--MVFGYGK 383
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK--VGGPDSF 181
VE ++ M+ + + + +C +L ++ G +HC ++K + G +
Sbjct: 384 VGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNIS 443
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V LV+MY KC + + ++F+ T + +VVSW ++I+ +V +E + LF++M
Sbjct: 444 VTNSLVEMYGKCGKMTFAWRIFN-TSETDVVSWNTLISSHVHIKQHEEAVNLFSKMVRED 502
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ N TL +++AC+ L +L +G+ +H YI + G +N L TAL+DMY KCG ++ +R
Sbjct: 503 QKPNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSR 562
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD + D++ W AMI GY +GY + AL++F + ++ PN +T S+LSA A G
Sbjct: 563 MVFDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAG 622
Query: 362 NLNMGRM----VHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ G+ + S + L+ YT +VD+ + + +A +
Sbjct: 623 LVEEGKYMFARMKSYSVNPNLKHYT---CMVDLLGRYGNVQEAEAMV------------- 666
Query: 418 IISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
L +SPD +++ C + +++G + Y+ + Y+ A N Y+
Sbjct: 667 ----LSMPISPDGGVWGALLGHCKTHNQIEMGIRIAKYAIDLEPENDGYYIIMA--NMYS 720
Query: 478 KCGDAQSARMVFDAMREK 495
G + A V M+E+
Sbjct: 721 FIGRWEEAENVRRTMKER 738
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 197/449 (43%), Gaps = 28/449 (6%)
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCR-DIGSSRQVFDETLDKNVVSWT 215
+R +D ++ H V G + F+ + L+ +Y D S +F K+ +
Sbjct: 16 HIRTLDSLLRFHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCSTLFHSLPSKDTFLYN 75
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
S + L LF+ MR + N TL +V+A A L L G LH K
Sbjct: 76 SFLKSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALASKT 135
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G+ H + + +Y +CG + AR VFDE+ D+V+WTA+I+G+ +G P+K L+
Sbjct: 136 GL---FHSSASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCL 192
Query: 336 TDKKWA---DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYA 392
D PN T A LG ++ G +H + ++ G+ + + ++++DMY+
Sbjct: 193 RHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVASF-IQSSVLDMYS 251
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIIS-----GL------------DDNVSPDAVTLVS 435
KC V +A F KD++ W S+I G+ ++ + PD V +
Sbjct: 252 KCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGC 311
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V+S + V G + H ++ + V +LL Y K G A +F + +
Sbjct: 312 VLSGFGNSMDVFQGKAFHGVIIRRYYVDDE-KVNDSLLFMYCKFGMLSLAERIF-PLCQG 369
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
+ W+ M+ GYG G+ + LF +M + + + +++C+ G V G
Sbjct: 370 SGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAVNLGRSIH 429
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
++ + F ++ +V++ + G++
Sbjct: 430 CNVIKGFLDGKNISVTNSLVEMYGKCGKM 458
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 172/363 (47%), Gaps = 35/363 (9%)
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN-IRDARSVFDELC 308
G L+ +R L H + G N + + L+ +Y N ++F L
Sbjct: 8 GELILVSKHIRTLDSLLRFHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCSTLFHSLP 67
Query: 309 SIDLVSWTAMIVG-YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
S D + + + +++S +P + L LF+ + ++ PNH T+ V+SA+A L L G
Sbjct: 68 SKDTFLYNSFLKSLFSRSLFP-RVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGA 126
Query: 368 MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------ 421
+H+L + GL + + V +Y++C + AR +F+ ++DV+AW ++I G
Sbjct: 127 SLHALASKTGL--FHSSASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGE 184
Query: 422 --------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
++D+ P+A T AC +LGAV GS LH K G+ S +
Sbjct: 185 PEKGLRCLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKNGVAS---F 241
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
+ +++L+ Y+KCG + A F + K+ + W+++IG Y G G L LF +M E
Sbjct: 242 IQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENE 301
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSM------CRDFKFVPSMKHYVCMVDLLARA 581
++P+ V+ +LS ++ V +G K F+ + D K S+ C +L+ A
Sbjct: 302 IRPDGVVVGCVLSGFGNSMDVFQG-KAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLA 360
Query: 582 GRL 584
R+
Sbjct: 361 ERI 363
>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
Length = 1008
Score = 352 bits (902), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 207/673 (30%), Positives = 357/673 (53%), Gaps = 31/673 (4%)
Query: 28 NQQTPTQHELDQTFASFHSLPSIPC-LNLLGLCKSTGSL---KAFHALLIVDGLTND-KC 82
NQ++ ++ Q + P++ ++++ C+++ + K+ HA ++ L +
Sbjct: 335 NQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSV 394
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T L+SMY G + A +F MP + S+ MI Y N L++ ++ + M+
Sbjct: 395 ATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGYGHNGLWEASMDAFCDMQFEGF 454
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ D +L AC +L I G H K + + L+ Y+ C + SS +
Sbjct: 455 DPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFK 514
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F + +N +SW ++I+G V N ++ + L ++M++ +E + +TL S++ C
Sbjct: 515 LFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAEN 574
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L QG LHGY +K G + LV AL+ MY CG+I + +F+ + +VSW A+I G
Sbjct: 575 LIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITG 634
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LED 380
Y ++ + F PN+VT+ ++L + L G+ +H+ +R G + +
Sbjct: 635 YRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSCRTLLQ---GKSIHAFAVRTGVIVE 691
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
+I +L+ MYA+ I ++FE ++D+ WN+I+S L
Sbjct: 692 TPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLH 751
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V PD +T +S+ISAC L ++ + +S+ AY ++G ++ + AL++ +A+CG+
Sbjct: 752 ARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGF-DKHIVISNALIDLFARCGNIS 810
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A+ +F+ + K+ V+WS MI GYG+ GD +LAL S M ++P+ + + ++LSACS
Sbjct: 811 IAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACS 870
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPS-MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
H G + +GW F SM + VP M+HY CMVDLL R G+L EA +F+E +P +P VSL
Sbjct: 871 HGGFIDQGWMIFNSMVEEG--VPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSL 928
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ L C ++ LGE + + EL P + YV++ N+YA+ GRW+ N+VR M++
Sbjct: 929 LESLLGACIIHGNVKLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEE 988
Query: 663 RGLSKSPGCSLVD 675
R L K PG SLV+
Sbjct: 989 RQLRKIPGFSLVE 1001
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/561 (28%), Positives = 282/561 (50%), Gaps = 24/561 (4%)
Query: 5 SLLQRHVSRTKKPKLQLRF-FSYTNQQTPTQHELDQTFASFHSL-PSIPC-LNLLGLCKS 61
SL ++ + P + F F +TN + + + + + +S P + L L LC++
Sbjct: 10 SLSSSYLLKPTPPLFRFSFAFPFTNLTSFSNKQFIKNTSKHNSSNPKVTSFLRLFDLCRN 69
Query: 62 TGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW 120
+LK ++LIV L D+ + + G + A S F+++ P + +MIR
Sbjct: 70 IENLKPLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRR 129
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
+ L++D++ Y R D+F F V+KAC L + VHC +++ ++
Sbjct: 130 LCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEEN 189
Query: 181 FVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
V+ T LVD YAK + +R V D+ ++V+W ++I+GY N +E + ++ E
Sbjct: 190 LVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINE 249
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
++ N T S++ C +++ L GK +HG+++K G + L AL+ MY GN+
Sbjct: 250 MGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFI 309
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
AR +FD ++V W +MI Y Q+ +A K+F A+ PN VT S++
Sbjct: 310 ARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCEN 369
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
N G+ +H+ ++ L+ +V AL+ MYAK + A +IF +++++WNS+
Sbjct: 370 SANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSM 429
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
ISG N PDA+++V+++SAC+ L A+ +G + HA+S ++
Sbjct: 430 ISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKE- 488
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
SN+ + ALL FY+ CG S+ +F M +N ++W+ +I G GD ++AL
Sbjct: 489 FDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLH 548
Query: 522 DMLNEEVQPNEVIFTTILSAC 542
M E+++ + V +I+ C
Sbjct: 549 KMQQEKMELDLVTLISIIPIC 569
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 245/478 (51%), Gaps = 20/478 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T LV Y G + AR V D + PD ++ +I Y LN K++ E + + + +
Sbjct: 194 TALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLK 253
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
+ F+ ++ C ++ +D G +H +VK G D F+ L+ MYA ++ +R +
Sbjct: 254 PNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDL 313
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD +KNVV W SMI+ Y QN + E +F +M + ++ N +T S++ C
Sbjct: 314 FDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANF 373
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK LH +++K ++ + TALL MY K G++ A +F ++ +L+SW +MI GY
Sbjct: 374 WYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSMISGY 433
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
+G + ++ F D ++ F P+ ++I ++LSA ++L + +G+ H+ R + +
Sbjct: 434 GHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEFDSNL 493
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
+ NAL+ Y+ C ++ + +F+ ++ I+WN++ISG N
Sbjct: 494 NISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQE 553
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ D VTL+S+I C + G +LH Y+ K G + +V + AL++ Y CGD +
Sbjct: 554 KMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTG-FACDVSLVNALISMYFNCGDINA 612
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ +F+ M ++ V+W+A+I GY +A F M+ E +PN V +L +C
Sbjct: 613 GKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLLNLLPSC 670
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 20/265 (7%)
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETT 407
T V+ A LG + + VH + +R E+ VI ALVD YAK + AR + +
Sbjct: 157 TFPFVIKACTALGAVWIAEGVHCIVLRTSFEENLVIQTALVDFYAKTGRMVKARLVLDKI 216
Query: 408 SEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGS 450
S+ D++ WN++ISG N + P+ T S+I C + + +G
Sbjct: 217 SQPDLVTWNALISGYSLNGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGK 276
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
S+H + K G SS+ ++ AL++ YA G+ AR +FD+ EKN V W++MI Y
Sbjct: 277 SIHGFVVKSGF-SSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQN 335
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
+ +F ML +QPN V F +I+ C ++ G K ++ ++ +
Sbjct: 336 QKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWYG-KSLHAHVMKYRLDSQLSV 394
Query: 571 YVCMVDLLARAGRLEEALEFMENMP 595
++ + A+ G L A MP
Sbjct: 395 ATALLSMYAKLGDLNSADFIFYQMP 419
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 194/565 (34%), Positives = 310/565 (54%), Gaps = 54/565 (9%)
Query: 167 KVHCEIVKVGGPDS-FVLTGLVDMYAKCR--DIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
++H +I+K G ++ F L+ L++ A D+ + +F + N V W MI G
Sbjct: 46 QIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSS 105
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
++ L + M E N+ T S+ +C K+R H+GK +H ++LK+G+E N+ +
Sbjct: 106 SESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFV 165
Query: 284 VTALLDMYVKCG------------NIRDA-------------------RSVFDELCSIDL 312
T+L++MY + G ++RDA R +FDE+ D+
Sbjct: 166 HTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDV 225
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN-LNMGRMVHS 371
VSW AMI GY QSG ++A+ F + + A PN T+ SVLSA AQ G+ L +G V S
Sbjct: 226 VSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRS 285
Query: 372 LGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------- 421
GL + ++N L+DMY KC + +A +FE +K+V++WN +I G
Sbjct: 286 WIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKE 345
Query: 422 --------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ-GLLSSNVYVGTAL 472
+ N+ P+ VT +S++ ACA+LGA+ +G +HAY K + + V + T+L
Sbjct: 346 ALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSL 405
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
++ YAKCGD A+ +FD M K+ TW+AMI G+ M G +L LFS M +E P++
Sbjct: 406 IDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDD 465
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
+ F +L+AC H G++ G + F SM +D+K P + HY CM+DL RAG +EA ++
Sbjct: 466 ITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVK 525
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
NM ++PD +++ + L C ++ R +L E + K + EL P+ YVL+SN+YA GRW
Sbjct: 526 NMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWED 585
Query: 653 VNQVRELMKQRGLSKSPGCSLVDLD 677
V ++R + + K PGCS +++D
Sbjct: 586 VAKIRTRLNDNRMKKVPGCSSIEVD 610
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 154/547 (28%), Positives = 261/547 (47%), Gaps = 68/547 (12%)
Query: 17 PKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDG 76
P L+ S+++ P + D P L LL CK+ +LK H+ +I G
Sbjct: 7 PVSTLQVLSFSDPSPPYKLVHDH-----------PSLTLLSNCKTLQTLKQIHSQIIKTG 55
Query: 77 LTNDK-CNTKLVSM--YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEF 133
L N +KL+ G + YA S+F ++ NP+ + MIR ++ +E+
Sbjct: 56 LHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEY 115
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
Y M E + + F + K+C ++R EG +VH ++K+G ++FV T L++MYA+
Sbjct: 116 YVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQ 175
Query: 193 ---------------CRD----------------IGSSRQVFDETLDKNVVSWTSMIAGY 221
RD + +R++FDE ++VVSW +MI+GY
Sbjct: 176 NGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGY 235
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL-RALHQGKWLHGYILKIGIEIN 280
Q+ +E + F MR V N T+ S+++ACA+ +L G W+ +I G+ N
Sbjct: 236 AQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSN 295
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
LV L+DMYVKCG++ +A ++F+++ ++VSW MI GYT +AL LF
Sbjct: 296 IRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQ 355
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSL---GIRLGLEDYTVINALVDMYAKCHVI 397
++ PN VT S+L A A LG L++G+ VH+ ++ + +L+DMYAKC +
Sbjct: 356 SNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDL 415
Query: 398 ADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISAC 440
A A+ IF+ + K + WN++ISG + PD +T V V++AC
Sbjct: 416 AVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTAC 475
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVT 499
G + +G + + +S + +++ + + G A + M K +
Sbjct: 476 KHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAI 535
Query: 500 WSAMIGG 506
W +++G
Sbjct: 536 WCSLLGA 542
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 196/412 (47%), Gaps = 38/412 (9%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L++ Y S G + AR +FD +P D S+ MI Y + ++ + F++ MR+
Sbjct: 198 TALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVT 257
Query: 144 HDNFVFSKVLKACCEL-RDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ VL AC + + G V I G G + ++ GL+DMY KC D+ +
Sbjct: 258 PNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASN 317
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F++ DKNVVSW MI GY C +E L LF RM + ++ N +T S++ ACA L A
Sbjct: 318 LFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGA 377
Query: 262 LHQGKWLHGYILK--IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L GKW+H Y+ K ++ L T+L+DMY KCG++ A+ +FD + + L +W AMI
Sbjct: 378 LDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMI 437
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
G+ G+ D AL LF+ F P+ +T VL+A G L++GR S I +
Sbjct: 438 SGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMI----Q 493
Query: 380 DYTVINAL------VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTL 433
DY V L +D++ + + +A + + K PD
Sbjct: 494 DYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMK-----------------PDGAIW 536
Query: 434 VSVISACASLGAVQVGSS-------LHAYSTKQGLLSSNVYVGTALLNFYAK 478
S++ AC +++ S L + +L SN+Y G AK
Sbjct: 537 CSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAK 588
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 192/554 (34%), Positives = 316/554 (57%), Gaps = 26/554 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D F F +L+A + ++H +++G D+F LV Y + + + +
Sbjct: 70 DAFTFPPLLRAA---QGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FDE ++V +W +M++G +N A E + LF RM V G+ +T+ S++ C L
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+H Y +K G++ + A++D+Y K G + + R VFD + S DLV+W ++I G+
Sbjct: 187 ALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGH 246
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE--D 380
Q G A+++F + + P+ +T+ S+ SA AQ G++ GR VH +R G + D
Sbjct: 247 EQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGD 306
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
NA+VDMYAK I A+ +F++ +D ++WN++I+G N
Sbjct: 307 IIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQK 366
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P T VSV+ A + LGA+Q G+ +HA S K GL + +VYVGT +++ YAKCG
Sbjct: 367 HEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGL-NLDVYVGTCVIDLYAKCGKL 425
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A ++F+ ++T W+A+I G G+ G G +L+LFS M E + P+ V F ++L+AC
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH G+V +G F M + P KHY CMVD+ RAG+L++A +F+ NMPI+PD ++
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAI 545
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L C ++ ++G+V + + EL P YYVL+SN+YA G+W V++VR L+++
Sbjct: 546 WGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 605
Query: 663 RGLSKSPGCSLVDL 676
+ L K+PG S +++
Sbjct: 606 QNLQKTPGWSSIEV 619
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 227/486 (46%), Gaps = 32/486 (6%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
LL + G+ HA + GL + LV Y FG V+ A FD M + D
Sbjct: 77 LLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVP 136
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
++ M+ N + V + M D S VL C L D + +H
Sbjct: 137 AWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYA 196
Query: 173 VKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
VK G D FV ++D+Y K + R+VFD +++V+W S+I+G+ Q +
Sbjct: 197 VKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAV 256
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDM 290
+F MR+ V + +TL SL +A A+ + G+ +H Y+++ G ++ + A++DM
Sbjct: 257 EMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDM 316
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVT 349
Y K I A+ +FD + D VSW +I GY Q+G +A+ ++ +K P T
Sbjct: 317 YAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGT 376
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
SVL A + LG L G +H+L I+ GL D V ++D+YAKC + +A +FE T
Sbjct: 377 FVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP 436
Query: 409 EKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSS 451
+ WN++ISG+ + +SPD VT VS+++AC+ G V G +
Sbjct: 437 RRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRN 496
Query: 452 -LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR----EKNTVTWSAMIGG 506
+ T G+ + +++ + + G A FD +R + ++ W A++G
Sbjct: 497 FFNMMQTAYGIKPIAKHY-ACMVDMFGRAGQLDDA---FDFIRNMPIKPDSAIWGALLGA 552
Query: 507 YGMQGD 512
+ G+
Sbjct: 553 CRIHGN 558
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 209/451 (46%), Gaps = 38/451 (8%)
Query: 67 AFHALLIVDGLTND--KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
A H + GL ++ CN ++ +YG G ++ R VFD M + D ++ +I +
Sbjct: 191 AMHLYAVKHGLDDELFVCNA-MIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQG 249
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT 184
VE + MR D + A + DI G VHC +V+ G ++
Sbjct: 250 GQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIA 309
Query: 185 G--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR--EG 240
G +VDMYAK I +++++FD ++ VSW ++I GY+QN A E + +++ M+ EG
Sbjct: 310 GNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEG 369
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
++ Q T S++ A + L AL QG +H +K G+ ++ ++ T ++D+Y KCG + +A
Sbjct: 370 -LKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEA 428
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F++ W A+I G G+ KAL LF+ + P+HVT S+L+A +
Sbjct: 429 MLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHA 488
Query: 361 GNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
G ++ GR M + GI+ + Y +VDM+ + + DA
Sbjct: 489 GLVDQGRNFFNMMQTAYGIKPIAKHYA---CMVDMFGRAGQLDDAFDFIRNMP------- 538
Query: 416 NSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ PD+ +++ AC G V++G A L NV + N
Sbjct: 539 ----------IKPDSAIWGALLGACRIHGNVEMGKV--ASQNLFELDPKNVGYYVLMSNM 586
Query: 476 YAKCGDAQSARMVFDAMREKN---TVTWSAM 503
YAK G V +R +N T WS++
Sbjct: 587 YAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 192/550 (34%), Positives = 299/550 (54%), Gaps = 23/550 (4%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ +L + R + ++H +I+ F+ L+++YAKC + + +F T
Sbjct: 145 LNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITH 204
Query: 208 D--KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
K +V+WTS+I + + L LFN+MR NQ T S+++A A + G
Sbjct: 205 HHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHG 264
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ LH I K G + N + TAL+DMY KC ++ A VFD++ +LVSW +MIVG+ +
Sbjct: 265 QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHN 324
Query: 326 GYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-V 383
D+A+ +F D + PN V+++SVLSA A +G LN GR VH + ++ GL T V
Sbjct: 325 NLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYV 384
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+N+L+DMY KC + +F+ ++DV+ WN ++ G N +
Sbjct: 385 MNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGI 444
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD + +V+ + ASL A+ G+++H K G + + +G+ L+ YAKCG A
Sbjct: 445 LPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGS-LITMYAKCGSLVDAY 503
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ + + N ++W+AMI Y + G + LF ML+E ++P+ V F +LSACSHTG
Sbjct: 504 QVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTG 563
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
V EG F SM + P +HY CMVDLL RAG L+EA F+E+MP++P S++GA
Sbjct: 564 RVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGAL 623
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C Y +G +++ E+ P YVL++N+ GR N+VR LM G+
Sbjct: 624 LGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVR 683
Query: 667 KSPGCSLVDL 676
K PGCS +D+
Sbjct: 684 KEPGCSWIDV 693
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 185/365 (50%), Gaps = 16/365 (4%)
Query: 66 KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H+L+ G N T LV MY + A VFD MP + S+ MI +F N
Sbjct: 265 QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHN 324
Query: 125 DLYKDIVEFYK-CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+LY V +K +R++ + S VL AC + ++ G +VH +VK G P ++V
Sbjct: 325 NLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYV 384
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ L+DMY KCR ++F D++VV+W ++ G+VQND +E F MR +
Sbjct: 385 MNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGI 444
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
++ + +++ + A L ALHQG +H I+K+G N ++ +L+ MY KCG++ DA
Sbjct: 445 LPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQ 504
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VF+ + +++SWTAMI Y G ++ ++LF P+HVT VLSA + G
Sbjct: 505 VFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGR 564
Query: 363 LNMG-------RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA- 414
+ G + +H + G E Y +VD+ + + +A+ E+ K +
Sbjct: 565 VEEGLAHFNSMKKIHDMNP--GPEHYA---CMVDLLGRAGWLDEAKRFIESMPMKPTPSV 619
Query: 415 WNSII 419
W +++
Sbjct: 620 WGALL 624
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 139/319 (43%), Gaps = 38/319 (11%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + G L + H +++ GL L+ MY +F + +
Sbjct: 352 SVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR 411
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
D ++ V++ + ND +++ ++ MR+ D FS VL + L + +G +H
Sbjct: 412 DVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIH 471
Query: 170 CEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+I+K+G + + G L+ MYAKC + + QVF+ D NV+SWT+MI+ Y + CA
Sbjct: 472 DQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCAN 531
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ + LF M +E + +T +++AC+ + +G + KI H +
Sbjct: 532 QVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKI------HDMNPGP 585
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
+ Y C +DL+ ++G+ D+A + P
Sbjct: 586 EHYA---------------CMVDLLG---------RAGWLDEAKRFIESMPMK---PTPS 618
Query: 349 TIASVLSASAQLGNLNMGR 367
++L A + GNL MGR
Sbjct: 619 VWGALLGACRKYGNLKMGR 637
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 90/212 (42%), Gaps = 10/212 (4%)
Query: 67 AFHALLIVDGLTNDKCNT-KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
A H +I G + C L++MY G + A VF+ + + + S+ MI Y L+
Sbjct: 469 AIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHG 528
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV----GGPDSF 181
++E ++ M E + F VL AC ++EG+ + K+ GP+ +
Sbjct: 529 CANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHY 588
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS-WTSMIAGYVQNDCAQEGLVLFNRM--R 238
+VD+ + + +++ + K S W +++ + + G R+
Sbjct: 589 AC--MVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEM 646
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
E + GN + L ++ T +L ++ + L G
Sbjct: 647 EPYNPGNYVLLANMCTRSGRLEEANEVRRLMG 678
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 195/544 (35%), Positives = 304/544 (55%), Gaps = 48/544 (8%)
Query: 181 FVLTGLVD-------MYAKC-----RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
VLTGL++ + A C RD+ + T + N SW I G++ ++ +
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 60
Query: 229 EGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E +VL+ R+ + + + T L ACA+L + G + G++L +G + + + A+
Sbjct: 61 EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 120
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ + V CG++ AR +FD+ C DLVSW +MI GY + G+ +AL + + K P+
Sbjct: 121 IHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDE 180
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
VT+ V+S+ AQL +L++GR H GL+ + NAL+DMY KC + AR +F++
Sbjct: 181 VTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDS 240
Query: 407 TS----------------EKDVIAWNSIISGLDD-----------------NVSPDAVTL 433
+ +KDV+ WN++I G N++PD VT+
Sbjct: 241 MTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTM 300
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
VS +SAC+ LGA+ VG +H Y K L S NV +GTAL++ YAKCG A VF +
Sbjct: 301 VSCLSACSQLGALDVGIWIHHYIEKHEL-SLNVALGTALIDMYAKCGKITKAIQVFQELP 359
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+N++TW+A+I G + G+ G++A FS+M++ V P+EV F +LSAC H G+V EG K
Sbjct: 360 GRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRK 419
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F M F P +KHY CMVDLL RAG LEEA E +++MPIE D ++GA C ++
Sbjct: 420 YFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIH 479
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
+GE K+L++ P + YVL++N+Y W + R+LM+QRG+ K+PGCS
Sbjct: 480 GNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSS 539
Query: 674 VDLD 677
++++
Sbjct: 540 IEVN 543
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 168/618 (27%), Positives = 289/618 (46%), Gaps = 99/618 (16%)
Query: 72 LIVDGLTNDK-CNTKLVSM--YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
+++ GL D +++L++ + + Y ++ + NP+ +S+ V IR + ++ +
Sbjct: 1 MVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPR 60
Query: 129 DIVEFYK-CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ V YK ++ + DN+ + + KAC L I G ++ ++ +G D FV +
Sbjct: 61 EAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAV 120
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ + C D+ +R++FD++ +++VSW SMI GYV+ A E L + M+ ++ ++
Sbjct: 121 IHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDE 180
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS---- 302
+T+ +V++CA+L L G+ H YI + G+++ L AL+DMY+KCGN+ AR
Sbjct: 181 VTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDS 240
Query: 303 ------------VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
+FDE+ D+V W AMI GY + +AL LF + + + P+ VT+
Sbjct: 241 MTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTM 300
Query: 351 ASVLSASAQLGNLNMGRMVH--------SLGIRLGLEDYTVINALVDMYAKCHVIADARY 402
S LSA +QLG L++G +H SL + LG AL+DMYAKC I A
Sbjct: 301 VSCLSACSQLGALDVGIWIHHYIEKHELSLNVALG-------TALIDMYAKCGKITKAIQ 353
Query: 403 IFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGA 445
+F+ ++ + W +IISGL D++V PD VT + ++SAC G
Sbjct: 354 VFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGL 413
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAM- 503
V+ G + + + LS + + +++ + G + A + +M E + V W A+
Sbjct: 414 VEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALF 473
Query: 504 ----IGGYGMQGDGGGS------------LALFSDMLNEEVQPNE------------VIF 535
I G + G+ S L ++M E E V
Sbjct: 474 FACRIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEK 533
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
T S+ G+V E + RD S + Y C++ +L LE +E P
Sbjct: 534 TPGCSSIEVNGIVYE------FIVRDKSHPQSEQIYECLI-------QLTRQLELVECTP 580
Query: 596 IEP---DVSLFGAFLHGC 610
+ P D SLFG+ C
Sbjct: 581 VFPIFGDNSLFGSDFGRC 598
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 220/667 (32%), Positives = 343/667 (51%), Gaps = 33/667 (4%)
Query: 31 TPTQHELDQTFASFHSLPSIP-CLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSM 89
+P ++ + L ++P C+ + +S G FH L V + L+ +
Sbjct: 142 SPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLG----FHVDLFV--------GSALIKL 189
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G++ AR VFD +P D + VM+ Y + + + + + MR ++ +
Sbjct: 190 YADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTY 249
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ +L C G +VH ++ G D V LV MY+KC ++ +R++F+
Sbjct: 250 TCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQ 309
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+ V+W +IAGYVQN E LFN M V+ + +T S + + + +L K +
Sbjct: 310 TDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEV 369
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H YI++ + + +L +AL+D+Y K G++ AR +F + +D+ TAMI GY G
Sbjct: 370 HSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLN 429
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINAL 387
A+ F PN +T+ASVL A A L L +G+ +H ++ LE+ V +A+
Sbjct: 430 IDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAI 489
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPD-AVTLVSVISACAS---- 442
DMYAKC + A F SE D I WNS+IS N P+ AV L + +
Sbjct: 490 TDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDS 549
Query: 443 ------------LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
L A+ G +H Y + SS+ +V +AL++ Y+KCG AR VF+
Sbjct: 550 VSLSSALSSAANLPALYYGKEMHGYVIRNAF-SSDTFVASALIDMYSKCGKLALARCVFN 608
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
M KN V+W+++I YG G L LF +ML V P+ V F I+SAC H G+VGE
Sbjct: 609 LMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGE 668
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G F+ M R++ M+HY CMVDL RAGRL EA + +++MP PD ++G L C
Sbjct: 669 GIHYFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGAC 728
Query: 611 GLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
L+ +L ++ + +LEL P + YYVL+SN++A G W V +VR LMK++G+ K PG
Sbjct: 729 RLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPG 788
Query: 671 CSLVDLD 677
S +D++
Sbjct: 789 YSWIDVN 795
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 140/479 (29%), Positives = 238/479 (49%), Gaps = 23/479 (4%)
Query: 66 KAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ H +IV G++ D C +++++ +Y G + ++F + + + MIR ++
Sbjct: 64 RQVHTQIIVGGMS-DVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYM 122
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+ + FY M D + F V+KAC L ++ M VH +G D FV
Sbjct: 123 LGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFV 182
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ L+ +YA I +R+VFDE ++ + W M+ GYV++ + F MR +
Sbjct: 183 GSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYS 242
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N +T +++ CA G +HG ++ G E + + L+ MY KCGN+ DAR
Sbjct: 243 MVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARK 302
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F+ + D V+W +I GY Q+G+ D+A LF A P+ VT AS L + + G+
Sbjct: 303 LFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGS 362
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L + VHS +R + D + +AL+D+Y K + AR IF+ + DV ++ISG
Sbjct: 363 LRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISG 422
Query: 422 -----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ + + P+++T+ SV+ ACA+L A+++G LH K+ L +
Sbjct: 423 YVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKK-QLEN 481
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
V VG+A+ + YAKCG A F M E +++ W++MI + G ++ LF M
Sbjct: 482 IVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQM 540
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 209/465 (44%), Gaps = 21/465 (4%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLV-DMYAKCRDIGSSRQVFDETL 207
+ +AC + + + +VH +I+ G D L+ V +Y C I +F
Sbjct: 47 LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE 106
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
N + W MI G L+ + +M V ++ T ++ AC L +
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMV 166
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H +G ++ + +AL+ +Y G I DAR VFDEL D + W M+ GY +SG
Sbjct: 167 VHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGD 226
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
+ A+ F + + N VT +LS A G +G VH L I G E D V N
Sbjct: 227 FNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANT 286
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
LV MY+KC + DAR +F T + D + WN +I+G N V PD
Sbjct: 287 LVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPD 346
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+VT S + + G+++ +H+Y + + +VY+ +AL++ Y K GD + AR +F
Sbjct: 347 SVTFASFLPSILESGSLRHCKEVHSYIVRH-RVPFDVYLKSALIDIYFKGGDVEMARKIF 405
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+ +AMI GY + G ++ F ++ E + PN + ++L AC+ +
Sbjct: 406 QQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALK 465
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
G + + + + + + D+ A+ GRL+ A EF M
Sbjct: 466 LGKELHCDILKK-QLENIVNVGSAITDMYAKCGRLDLAYEFFRRM 509
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 192/632 (30%), Positives = 334/632 (52%), Gaps = 24/632 (3%)
Query: 66 KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HA + GL N + L+++Y G + A+ VFD + + M+ + N
Sbjct: 347 QQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQN 406
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
DL ++ ++ ++ MR+ E D+F F VL AC L +D G +VHC +K D FV
Sbjct: 407 DLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVA 466
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
++DMY+K I ++ +F K+ VSW ++I G N+ +E + + RM+ +
Sbjct: 467 NAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIA 526
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
++++ + + AC+ +RA GK +H +K + N + ++L+D+Y K G++ +R V
Sbjct: 527 PDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKV 586
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
+ + +V A+I G Q+ D+A++LF F P++ T AS+LS +
Sbjct: 587 LAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSS 646
Query: 364 NMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIIS 420
+G+ VHS ++ L +D ++ +LV +Y KC ++ DA + + E K+++ W + IS
Sbjct: 647 VIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATIS 706
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G N V D T SV+ AC+ + A+ G +H K G +S
Sbjct: 707 GYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVS 766
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALFSD 522
+AL++ Y+KCGD S+ +F ++ K N + W++MI G+ G +L LF
Sbjct: 767 YET-AASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQK 825
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M +++P+EV +L ACSH G++ EG F SM + + VP + HY C++DLL R G
Sbjct: 826 MQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGG 885
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
L+EA E ++ +P D ++ FL C ++ + G+V KK++E+ P ++ YV +S+
Sbjct: 886 HLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSS 945
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
L+A+ G W+ RE M+++G+ K PGCS +
Sbjct: 946 LHAAAGNWVEAKVAREAMREKGVMKFPGCSWI 977
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 150/590 (25%), Positives = 289/590 (48%), Gaps = 27/590 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S S G + AR++ + P ++ +I Y + L ++ YK M+++
Sbjct: 267 IISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPT 326
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F+ +L A + DEG ++H VK G + FV + L+++Y K I +++VFD
Sbjct: 327 RSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFD 386
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +KN+V W +M+ G+VQND +E + +F MR +E + T S++ AC L +L
Sbjct: 387 FSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDI 446
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +K ++ + + A+LDMY K G I A+++F + D VSW A+IVG
Sbjct: 447 GRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAH 506
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTV 383
+ ++A+ + K P+ V+ A+ ++A + + G+ +H I+ + ++ V
Sbjct: 507 NEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAV 566
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
++L+D+Y+K + +R + ++ N++I+G L D
Sbjct: 567 GSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGF 626
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA- 485
P T S++S C + +G +H+Y+ K LL+ + +G +L+ Y KC + A
Sbjct: 627 KPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDAN 686
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+++ + KN V W+A I GY G SL +F M + +V+ +E F ++L ACS
Sbjct: 687 KLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEI 746
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
+ +G K + + FV ++D+ ++ G + + E + + + ++ + +
Sbjct: 747 AALTDG-KEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNS 805
Query: 606 FLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYY-VLVSNLYA---SDGR 649
+ G + ++ +KM E L PD+ VL++ +A S+GR
Sbjct: 806 MIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGR 855
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 141/552 (25%), Positives = 267/552 (48%), Gaps = 64/552 (11%)
Query: 68 FHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFD--SMPNPDFYSFQVMIRWYFLN 124
HA ++ GL + LV +YG G V YA + + ++ + +
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 125 DLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+D+++ ++ +R + D F + VL AC L +++G +VHC+++K G +F
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
GLVDMYAKC ++ +R+VFD + + W SMIAGY + Q+ L LF+RM +
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+Q+T ++++ A + G + DAR+
Sbjct: 258 APDQVTYVTIISTLASM-----------------------------------GRLSDART 282
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+ + V+W A+I Y+QSG + L+ D K P T AS+LSA+A +
Sbjct: 283 LLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTA 342
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+ G+ +H+ ++ GL+ + V ++L+++Y K I+DA+ +F+ ++EK+++ WN+++ G
Sbjct: 343 FDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYG 402
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
N + D T VSV+ AC +L ++ +G +H + K + +
Sbjct: 403 FVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNS-MDA 461
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+++V A+L+ Y+K G A+ +F + K++V+W+A+I G + ++ + M
Sbjct: 462 DLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMK 521
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAG 582
+ P+EV F T ++ACS+ G + C K+ H V ++DL ++ G
Sbjct: 522 CYGIAPDEVSFATAINACSNIRATETGKQIH---CASIKYNVCSNHAVGSSLIDLYSKFG 578
Query: 583 RLEEALEFMENM 594
+E + + + ++
Sbjct: 579 DVESSRKVLAHV 590
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/511 (26%), Positives = 236/511 (46%), Gaps = 57/511 (11%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C G+L + H ++ G + C LV MY VK AR VFD + PD
Sbjct: 166 VLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPD 225
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ MI Y Y+ + + M K
Sbjct: 226 TICWASMIAGYHRVGRYQQALALFSRMEK------------------------------- 254
Query: 171 EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
PD ++ A + +R + + V+W ++I+ Y Q+ E
Sbjct: 255 ---MGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEV 311
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L+ M+ + + T S+++A A + A +G+ +H +K G++ N + ++L+++
Sbjct: 312 FGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINL 371
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
YVK G I DA+ VFD ++V W AM+ G+ Q+ ++ +++F + AD + T
Sbjct: 372 YVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTF 431
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE 409
SVL A L +L++GR VH + I+ ++ D V NA++DMY+K I A+ +F
Sbjct: 432 VSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPG 491
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
KD ++WN++I GL N ++PD V+ + I+AC+++ A + G +
Sbjct: 492 KDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQI 551
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H S K + SN VG++L++ Y+K GD +S+R V + + V +A+I G
Sbjct: 552 HCASIKYN-VCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNR 610
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
++ LF +L + +P+ F +ILS C+
Sbjct: 611 EDEAIELFQQVLKDGFKPSNFTFASILSGCT 641
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 135/524 (25%), Positives = 254/524 (48%), Gaps = 43/524 (8%)
Query: 168 VHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQN 224
+H ++++G P L LVD+Y + +G + + + + +S+++ + ++
Sbjct: 78 LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137
Query: 225 DCAQEGLVLFNRMREGFV-EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
++ L F R+R +Q L +++AC++L AL QG+ +H +LK G ++
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
L+DMY KC ++DAR VFD + D + W +MI GY + G +AL LF+ +
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYI 403
P+ VT +++S A +G L+ R +L R+ + NA++ Y++ + ++ +
Sbjct: 258 APDQVTYVTIISTLASMGRLSDAR---TLLKRIQMPSTVAWNAVISSYSQSGLESEVFGL 314
Query: 404 FETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
++ + ++ P T S++SA AS+ A G +HA + K G L
Sbjct: 315 YKDMKRQGLM--------------PTRSTFASMLSAAASMTAFDEGQQIHAAAVKHG-LD 359
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+NV+VG++L+N Y K G A+ VFD EKN V W+AM+ G+ ++ +F M
Sbjct: 360 ANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYM 419
Query: 524 LNEEVQPNEVIFTTILSACSHTGM--VGEGWKCFY---SMCRDFKFVPSMKHYVCMVDLL 578
+++ ++ F ++L AC + +G C SM D FV + M+D+
Sbjct: 420 RRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADL-FVAN-----AMLDMY 473
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM--LELHPDKACY 636
++ G ++ A +P + VS + A + G + M+K+M + PD+ +
Sbjct: 474 SKLGAIDVAKALFSLIPGKDSVS-WNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSF 532
Query: 637 YVLV---SNLYASD-GRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ SN+ A++ G+ I ++ + + + G SL+DL
Sbjct: 533 ATAINACSNIRATETGKQIHCASIKYNVCS---NHAVGSSLIDL 573
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 211/636 (33%), Positives = 339/636 (53%), Gaps = 25/636 (3%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ H L+I G ++ CN LV++Y + A +F +M + D S+ +I
Sbjct: 281 EQLHCLVIKWGFHSETYVCNG-LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQ 339
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL 183
+E + M++ + D + +L AC + + +GM++H +K G +L
Sbjct: 340 QGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIIL 399
Query: 184 TG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGF 241
G L+D+Y+KC D+ ++ + F T +N+V W M+ Y Q D + +F +M+ EG
Sbjct: 400 EGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGM 459
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ NQ T S++ C L AL+ G+ +H +++K G ++N ++ + L+DMY K G + A
Sbjct: 460 IP-NQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALAL 518
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+ L D+VSWTAMI GY Q +AL+LF + ++ +++ AS +SA A +
Sbjct: 519 RILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIR 578
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L G+ +H+ G D ++ NAL+ +YA+C I +A FE +K+ I+WNS++S
Sbjct: 579 ALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVS 638
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
GL + + T S ISA ASL ++ G +H+ K G
Sbjct: 639 GLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGY-D 697
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
S V +L++ YAK G A F+ M E+N ++W+AMI GY G G +L LF +M
Sbjct: 698 SEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEM 757
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+ PN V F +LSACSH G+V EG F SM + VP +HYVC+VDLL RAG+
Sbjct: 758 KVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQ 817
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L+ A+E+++ MPI D ++ L C ++ ++GE +LEL P+ + YVL+SN+
Sbjct: 818 LDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNI 877
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
YA +WI + R+LMK G+ K PG S +++ A
Sbjct: 878 YAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNA 913
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 266/540 (49%), Gaps = 30/540 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE-- 143
LV Y G A VFD N +S+ MI + K + + R+ L E
Sbjct: 99 LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQ---KSNFQVFCLFRRMLAEGI 155
Query: 144 -HDNFVFSKVLKACCELRDI--DEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSS 199
+ + F+ VLKAC DI + +VH G S V L+D+Y+K I S+
Sbjct: 156 TPNGYTFAGVLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
++VF+ K++V+W +MI+G QN +E ++LF M + L S+++A K+
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ G+ LH ++K G +++ L+ +Y + + A +F + S D VS+ ++I
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLI 334
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
G Q G+ D+AL+LFT + P+ +T+AS+LSA A +G L+ G +HS I+ G+
Sbjct: 335 SGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS--GLDDNVS--------- 427
D + +L+D+Y+KC + A F T ++++ WN ++ G DN+S
Sbjct: 395 ADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQM 454
Query: 428 ------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
P+ T S++ C SLGA+ +G +H + K G NVYV + L++ YAK G
Sbjct: 455 QMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTG-FQLNVYVCSVLIDMYAKYGQ 513
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A + + E + V+W+AMI GY +L LF +M +Q + + F + +SA
Sbjct: 514 LALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISA 573
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C+ + +G + ++ F + ++ L AR GR++EA E + + ++S
Sbjct: 574 CAGIRALRQGQQ-IHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNIS 632
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 22/339 (6%)
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
L N M E V N L+ C +L + LH I K G + L+ +L+D Y
Sbjct: 45 LMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYF 104
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
+ G+ A VFDE + + SW MI + + LF PN T A
Sbjct: 105 RHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAG 164
Query: 353 VLSASAQLGNL--NMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSE 409
VL A G++ N + VHS G + ++ N L+D+Y+K I A+ +F
Sbjct: 165 VLKACVG-GDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICM 223
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
KD++ W ++ISGL N + P L SV+SA + ++G L
Sbjct: 224 KDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQL 283
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H K G S YV L+ Y++ SA +F M ++ V+++++I G QG
Sbjct: 284 HCLVIKWG-FHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+L LF+ M + ++P+ + ++LSAC+ G + +G
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKG 381
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 205/638 (32%), Positives = 331/638 (51%), Gaps = 31/638 (4%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K+ H + + GL D ++++YG G + A +FD MP + S+ +IR + N
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSEN 289
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFV-----FSKVLKACCELRDIDEGMKVHCEIVKVG-GP 178
+ +E Y+ R L+ D + +L C ++D GM +H VK+G
Sbjct: 290 GFW---LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVH 346
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM- 237
+ V L+DMY+KC + + +F + +K+VVSW SMI Y + E L +M
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMW 406
Query: 238 -REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
E +E N++T+ +L+ AC + L + LHGY L+ + + A + Y KCG+
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ A VF + + + SW A+I G+ Q+G P KAL + + P+ +I S+L A
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLA 526
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+LG L G+ +H +R GLE + V +L+ +Y C R FET +K+ + W
Sbjct: 527 CGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCW 586
Query: 416 NSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
N+++SG L D + PD + + S++ AC+ L A+ +G +H ++ K
Sbjct: 587 NAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALK 646
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
L+ N +V +L++ YAK G ++ +F+ + K +W+ MI G+G+ G G ++
Sbjct: 647 NSLMEDN-FVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVE 705
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF DM + QP+ F +L AC H G+V EG M +K P ++HY C++D+L
Sbjct: 706 LFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDML 765
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
RAGRL EAL F+ MP EPD ++ + L Y ++GE +K+L L +KA Y+
Sbjct: 766 GRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYI 825
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L+SNLYA+ G+W V VR+ MK L K GCS ++L
Sbjct: 826 LLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIEL 863
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 252/495 (50%), Gaps = 29/495 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRL 141
NT+L++MY G+ +R VFD + N + + + ++ Y N+LY + + F + +
Sbjct: 146 NTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTE 205
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
+ DNF F ++KAC DI G VH VK+G D FV ++ +Y KC + +
Sbjct: 206 FQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE---GFVEGNQITLGSLVTACA 257
++FD+ ++N++SW S+I G+ +N E F + E G + + T+ +L+ C+
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIP-DVATMVTLLPVCS 324
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
+ G +HG +K+G+ + AL+DMY KCG + +A +F ++ + +VSW +
Sbjct: 325 GEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNS 384
Query: 318 MIVGYTQSGYPDKALKLFTDKKWAD---FFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
MI Y++ G+ + L K W + N VTI ++L A + L R +H +
Sbjct: 385 MIGAYSREGFVFETFDLLR-KMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSL 443
Query: 375 RLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------- 425
R + +I NA + YAKC + A ++F + K V +WN++I G N
Sbjct: 444 RHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALD 503
Query: 426 ---------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ PD ++VS++ AC LG +Q G +H + + G L N +V +LL+ Y
Sbjct: 504 FYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG-LEMNSFVAVSLLSLY 562
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
C R F+ M +KN+V W+AM+ GY +L+LF ML++ ++P+E+
Sbjct: 563 FHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIA 622
Query: 537 TILSACSHTGMVGEG 551
+IL ACS +G G
Sbjct: 623 SILGACSQLSALGLG 637
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 224/426 (52%), Gaps = 28/426 (6%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDS--FVL-TGLVDMYAKCRDIGSSRQVFDETLD 208
+L+ C + ++++ G K+ E++ V S FVL T L+ MY+ C SR VFD L+
Sbjct: 113 LLQKCGQYKNVEIGRKLD-EMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
KN+ W ++++GYV+N+ E + F + + + T L+ AC +H GK
Sbjct: 172 KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS 231
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG +K+G+ ++ + A++ +Y KCG + +A +FD++ +L+SW ++I G++++G+
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291
Query: 328 PDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVI 384
+A + F + P+ T+ ++L + GN+++G ++H + ++LGL + V
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVC 351
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------------DDN 425
NAL+DMY+KC +++A +F K V++WNS+I ++
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ + VT+++++ AC + +LH YS + + + A + YAKCG A
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKEL-INNAFIAAYAKCGSLVFA 470
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF M K+ +W+A+IGG+ GD +L + +M + P++ ++L AC
Sbjct: 471 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRL 530
Query: 546 GMVGEG 551
G++ G
Sbjct: 531 GLLQYG 536
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 351 bits (900), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 200/628 (31%), Positives = 334/628 (53%), Gaps = 22/628 (3%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFLNDL 126
H L + GL L++MY G + A VF+ M + D S+ MI N +
Sbjct: 187 HGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGM 246
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGL 186
+ ++ ++ M++ + +++ VL+ C EL ++ G ++H ++K G + L
Sbjct: 247 FLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNAL 306
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ MY KC + S+ +VF E +K+ +SW SM++ YVQN E + + M G + +
Sbjct: 307 LVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDH 366
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+ SL +A L L GK +H Y +K ++ ++ + L+DMY+KC I + VFD
Sbjct: 367 ACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDR 426
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D +SWT +I Y QS +AL++F + + + + I S+L A + L + +
Sbjct: 427 MRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLA 486
Query: 367 RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII-----SG 421
+ +H IR GL D V N ++D+Y +C + + +FET +KD++ W S+I SG
Sbjct: 487 KQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSG 546
Query: 422 L------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
L +V PD+V LVS++ A L ++ G +H + ++ V
Sbjct: 547 LLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIV- 605
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
++L++ Y+ CG A VF+A++ K+ V W+AMI GM G G ++ LF ML V
Sbjct: 606 SSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVT 665
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYS-MCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
P+ V F +L ACSH+ +V EG KC+ M ++ P +HY C+VDLL R+G+ EEA
Sbjct: 666 PDHVSFLALLYACSHSKLVNEG-KCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAY 724
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF+++MP++P ++ + L C ++ +L V ++LEL PD YVLVSN++A G
Sbjct: 725 EFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMG 784
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W +VR + +RGL K P CS +++
Sbjct: 785 KWNNAKEVRARISERGLRKDPACSWIEI 812
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 178/588 (30%), Positives = 293/588 (49%), Gaps = 35/588 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
TKL+ MYG G V AR +FD M + +S+ +I Y + + + Y+ MR
Sbjct: 99 TKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAAS 158
Query: 144 ---HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
D + VLKA D G +VH VK G +FV L+ MYAKC + S+
Sbjct: 159 GVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSA 218
Query: 200 RQVFDETLD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+VF+ D ++V SW SMI+G +QN + L LF M+ + N T ++ C +
Sbjct: 219 MRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTE 278
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L L+ G+ LH +LK G E+N ALL MY KCG + A VF E+ D +SW +M
Sbjct: 279 LAQLNLGRELHAALLKSGSEVNIQ-CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSM 337
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
+ Y Q+G +A++ ++ F P+H I S+ SA LG L G+ VH+ I+ L
Sbjct: 338 LSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRL 397
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------------- 420
+ D V N L+DMY KC I + ++F+ KD I+W +II+
Sbjct: 398 DSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFRE 457
Query: 421 GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ + D + + S++ AC+ L + + LH Y+ + GLL ++ V +++ Y +CG
Sbjct: 458 AQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLL--DLVVKNRIIDIYGECG 515
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + +F+ + +K+ VTW++MI Y G +L LF++M + +VQP+ V +IL
Sbjct: 516 EVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILG 575
Query: 541 ACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
A + +G + + + R+F ++ +VD+ + G L AL+ + + D
Sbjct: 576 AIGGLSSLAKGKEVHGFLIRRNFHMEEAI--VSSLVDMYSGCGSLSGALKVFNAVKCK-D 632
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYA 645
+ L+ A ++ G++ + K+ML+ + PD + L LYA
Sbjct: 633 MVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLAL---LYA 677
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 157/564 (27%), Positives = 258/564 (45%), Gaps = 76/564 (13%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCR 194
R +EH +V V + + +G++VH V G G D F+ T L+ MY KC
Sbjct: 54 RSPPQEHYGWVLDLVAAK----KAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCG 109
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG---NQITLGS 251
+ +R +FD + V SW ++I Y+ + A E L ++ MR G + TL S
Sbjct: 110 RVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLAS 169
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SI 310
++ A G +HG +K G++ ++ + AL+ MY KCG + A VF+ +
Sbjct: 170 VLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGR 229
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
D+ SW +MI G Q+G +AL LF + A N T VL +L LN+GR +H
Sbjct: 230 DVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELH 289
Query: 371 SLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----- 425
+ ++ G E NAL+ MY KC + A +F EKD I+WNS++S N
Sbjct: 290 AALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAE 349
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
PD +VS+ SA LG + G +HAY+ KQ L S+ VG L+
Sbjct: 350 AIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQ-RLDSDTQVGNTLM 408
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y KC + + VFD MR K+ ++W+ +I Y +L +F + E ++ + +
Sbjct: 409 DMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPM 468
Query: 534 IFTTILSACS--HTGMVGEGWKCF------------------YSMCRD----FKFVPSMK 569
+ +IL ACS T ++ + C+ Y C + K +++
Sbjct: 469 MIGSILEACSGLETILLAKQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVE 528
Query: 570 H-----YVCMVDLLARAGRLEEALEF---MENMPIEPD----VSLFGAF----------- 606
+ M++ A +G L EAL M++ ++PD VS+ GA
Sbjct: 529 QKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKE 588
Query: 607 LHGCGLYSRFDLGEVMIKKMLELH 630
+HG + F + E ++ +++++
Sbjct: 589 VHGFLIRRNFHMEEAIVSSLVDMY 612
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
K H I +GL + +++ +YG G V ++ +F+++ D ++ MI Y +
Sbjct: 487 KQLHCYAIRNGLLDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSG 546
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
L + + + M+ + D+ +L A L + +G +VH +++ + +++
Sbjct: 547 LLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVS 606
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LVDMY+ C + + +VF+ K++V WT+MI + ++ + LF RM + V
Sbjct: 607 SLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTP 666
Query: 245 NQITLGSLVTACAKLRALHQGK 266
+ ++ +L+ AC+ + +++GK
Sbjct: 667 DHVSFLALLYACSHSKLVNEGK 688
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/657 (31%), Positives = 337/657 (51%), Gaps = 87/657 (13%)
Query: 76 GLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFY 134
G + C ++ M+ G + AR F+ + D + + +M+ Y +K ++
Sbjct: 220 GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCI 279
Query: 135 KCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCR 194
M+ + D ++ ++ + +E K E+ GG F
Sbjct: 280 SDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEM---GGLKDF------------- 323
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
NVVSWT++IAG QN E L +F +M V+ N IT+ S V+
Sbjct: 324 -------------KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVS 370
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRDARSVFDELCSIDL 312
AC L L G+ +HGY +K+ E++S L+ +L+D Y KC ++ AR F + DL
Sbjct: 371 ACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL 429
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWA--------------------------DFF-- 344
VSW AM+ GY G ++A++L ++ K+ +FF
Sbjct: 430 VSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQR 489
Query: 345 -------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHV 396
PN TI+ L+A Q+ NL +G+ +H +R +E T V +AL+ MY+ C
Sbjct: 490 MHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDS 549
Query: 397 IADARYIFETTSEKDVIAWNSIISG----------LD-------DNVSPDAVTLVSVISA 439
+ A +F S +DV+ WNSIIS LD NV + VT+VS + A
Sbjct: 550 LEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPA 609
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C+ L A++ G +H + + GL + N ++ +L++ Y +CG Q +R +FD M +++ V+
Sbjct: 610 CSKLAALRQGKEIHQFIIRCGLDTCN-FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVS 668
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+ MI YGM G G ++ LF ++PN + FT +LSACSH+G++ EGWK F M
Sbjct: 669 WNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMK 728
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
++ P+++ Y CMVDLL+RAG+ E LEF+E MP EP+ +++G+ L C ++ DL
Sbjct: 729 TEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLA 788
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
E + + EL P + YVL++N+Y++ GRW ++R LMK+RG++K PGCS +++
Sbjct: 789 EYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV 845
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/506 (25%), Positives = 240/506 (47%), Gaps = 90/506 (17%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPD--SFVLTGLVDMYAKCRDIGSSRQVFDE 205
+++ +L+ C +L ++ G +VH ++V V G D F+ + L+++Y + + +R++FD+
Sbjct: 91 IYASILQKCRKLYNLRLGFQVHAQLV-VNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK 149
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
++NV SWT+++ Y +E + LF M V + + AC++L+ G
Sbjct: 150 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
K ++ Y+L IG E NS + ++LDM++KCG + AR F+E+ D+ W M+ GYT
Sbjct: 210 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 269
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL-NMGRMVHSLGIRLGLEDYTVI 384
G KALK +D K + P+ VT +++S AQ G + +G GL+D+
Sbjct: 270 GEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMG---GLKDF--- 323
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
+ +V++W ++I+G + N V
Sbjct: 324 ------------------------KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+++T+ S +SAC +L ++ G +H Y K L S++ VG +L+++YAKC + AR
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F +++ + V+W+AM+ GY ++G ++ L S+M + ++P+ + + +++
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTG------ 473
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFG 604
+ G + ALEF M +M ++P+ +
Sbjct: 474 ------------------------------FTQYGDGKAALEFFQRMHSMGMDPNTTTIS 503
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELH 630
L CG LG+ + +L H
Sbjct: 504 GALAACGQVRNLKLGKEIHGYVLRNH 529
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/617 (24%), Positives = 273/617 (44%), Gaps = 118/617 (19%)
Query: 69 HALLIVDGLTNDKCN---TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
HA L+V+G+ D C ++L+ +Y G V+ AR +FD M + +S+ ++ Y
Sbjct: 112 HAQLVVNGV--DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
Y++ ++ + M D+FVF KV KAC EL++ G V+ ++ +G +S V
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
++DM+ KC + +R+ F+E K+V W M++GY ++ L + M+ V+
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+Q+T ++++ A+ + +++ G ++D +
Sbjct: 290 DQVTWNAIISGYAQSGQFEEAS----------------------KYFLEMGGLKDFKP-- 325
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
++VSWTA+I G Q+GY +AL +F PN +TIAS +SA L L
Sbjct: 326 ------NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLR 379
Query: 365 MGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
GR +H I++ D V N+LVD YAKC + AR F + D+++WN++++G
Sbjct: 380 HGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGY 439
Query: 423 D-----------------DNVSPDAV---------------------------------- 431
+ PD +
Sbjct: 440 ALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNT 499
Query: 432 -TLVSVISACASLGAVQVGSSLHAYSTKQGL-LSSNVYVGTALLNFYAKCGDAQSARMVF 489
T+ ++AC + +++G +H Y + + LS+ VG+AL++ Y+ C + A VF
Sbjct: 500 TTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTG--VGSALISMYSGCDSLEVACSVF 557
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+ ++ V W+++I G +L L +M V+ N V + L ACS +
Sbjct: 558 SELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALR 617
Query: 550 EG-------WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD--- 599
+G +C C F+ + ++D+ R G ++++ + MP + D
Sbjct: 618 QGKEIHQFIIRCGLDTC---NFILN-----SLIDMYGRCGSIQKSRRIFDLMP-QRDLVS 668
Query: 600 ----VSLFGAFLHGCGL 612
+S++G +HG G+
Sbjct: 669 WNVMISVYG--MHGFGM 683
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 208/657 (31%), Positives = 337/657 (51%), Gaps = 87/657 (13%)
Query: 76 GLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFY 134
G + C ++ M+ G + AR F+ + D + + +M+ Y +K ++
Sbjct: 220 GFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCI 279
Query: 135 KCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCR 194
M+ + D ++ ++ + +E K E+ GG F
Sbjct: 280 SDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEM---GGLKDF------------- 323
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
NVVSWT++IAG QN E L +F +M V+ N IT+ S V+
Sbjct: 324 -------------KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVS 370
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRDARSVFDELCSIDL 312
AC L L G+ +HGY +K+ E++S L+ +L+D Y KC ++ AR F + DL
Sbjct: 371 ACTNLSLLRHGREIHGYCIKVE-ELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDL 429
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWA--------------------------DFF-- 344
VSW AM+ GY G ++A++L ++ K+ +FF
Sbjct: 430 VSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQR 489
Query: 345 -------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHV 396
PN TI+ L+A Q+ NL +G+ +H +R +E T V +AL+ MY+ C
Sbjct: 490 MHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDS 549
Query: 397 IADARYIFETTSEKDVIAWNSIISG----------LD-------DNVSPDAVTLVSVISA 439
+ A +F S +DV+ WNSIIS LD NV + VT+VS + A
Sbjct: 550 LEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPA 609
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C+ L A++ G +H + + GL + N ++ +L++ Y +CG Q +R +FD M +++ V+
Sbjct: 610 CSKLAALRQGKEIHQFIIRCGLDTCN-FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVS 668
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+ MI YGM G G ++ LF ++PN + FT +LSACSH+G++ EGWK F M
Sbjct: 669 WNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMK 728
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
++ P+++ Y CMVDLL+RAG+ E LEF+E MP EP+ +++G+ L C ++ DL
Sbjct: 729 TEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLA 788
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
E + + EL P + YVL++N+Y++ GRW ++R LMK+RG++K PGCS +++
Sbjct: 789 EYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV 845
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 217/419 (51%), Gaps = 51/419 (12%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPD--SFVLTGLVDMYAKCRDIGSSRQVFDE 205
+++ +L+ C +L ++ G +VH ++V V G D F+ + L+++Y + + +R++FD+
Sbjct: 91 IYASILQKCRKLYNLRLGFQVHAQLV-VNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDK 149
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
++NV SWT+++ Y +E + LF M V + + AC++L+ G
Sbjct: 150 MSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVG 209
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
K ++ Y+L IG E NS + ++LDM++KCG + AR F+E+ D+ W M+ GYT
Sbjct: 210 KDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSK 269
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL-NMGRMVHSLGIRLGLEDYTVI 384
G KALK +D K + P+ VT +++S AQ G + +G GL+D+
Sbjct: 270 GEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMG---GLKDF--- 323
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
+ +V++W ++I+G + N V
Sbjct: 324 ------------------------KPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVK 359
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+++T+ S +SAC +L ++ G +H Y K L S++ VG +L+++YAKC + AR
Sbjct: 360 PNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARR 419
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F +++ + V+W+AM+ GY ++G ++ L S+M + ++P+ + + +++ + G
Sbjct: 420 KFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYG 478
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/617 (24%), Positives = 273/617 (44%), Gaps = 118/617 (19%)
Query: 69 HALLIVDGLTNDKCN---TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
HA L+V+G+ D C ++L+ +Y G V+ AR +FD M + +S+ ++ Y
Sbjct: 112 HAQLVVNGV--DVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
Y++ ++ + M D+FVF KV KAC EL++ G V+ ++ +G +S V
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
++DM+ KC + +R+ F+E K+V W M++GY ++ L + M+ V+
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+Q+T ++++ A+ + +++ G ++D +
Sbjct: 290 DQVTWNAIISGYAQSGQFEEAS----------------------KYFLEMGGLKDFKP-- 325
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
++VSWTA+I G Q+GY +AL +F PN +TIAS +SA L L
Sbjct: 326 ------NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLR 379
Query: 365 MGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
GR +H I++ D V N+LVD YAKC + AR F + D+++WN++++G
Sbjct: 380 HGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGY 439
Query: 423 D-----------------DNVSPDAV---------------------------------- 431
+ PD +
Sbjct: 440 ALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNT 499
Query: 432 -TLVSVISACASLGAVQVGSSLHAYSTKQGL-LSSNVYVGTALLNFYAKCGDAQSARMVF 489
T+ ++AC + +++G +H Y + + LS+ VG+AL++ Y+ C + A VF
Sbjct: 500 TTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTG--VGSALISMYSGCDSLEVACSVF 557
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+ ++ V W+++I G +L L +M V+ N V + L ACS +
Sbjct: 558 SELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALR 617
Query: 550 EG-------WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD--- 599
+G +C C F+ + ++D+ R G ++++ + MP + D
Sbjct: 618 QGKEIHQFIIRCGLDTC---NFILN-----SLIDMYGRCGSIQKSRRIFDLMP-QRDLVS 668
Query: 600 ----VSLFGAFLHGCGL 612
+S++G +HG G+
Sbjct: 669 WNVMISVYG--MHGFGM 683
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 199/582 (34%), Positives = 310/582 (53%), Gaps = 61/582 (10%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYA--KCRDIGSSRQVFDETLD 208
++ C LR + + H +++ G D + + L + A + +R+VFDE
Sbjct: 37 LIDRCSSLRQLKQ---THAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQ 93
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFVEGNQITLGSLVTACAKLRALHQGK 266
N +W ++I Y + F M E N+ T L+ A A++ +L G+
Sbjct: 94 PNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 153
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
LHG +K + + + +L+ Y CG++ A VF + D+VSW +MI G+ Q G
Sbjct: 154 SLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 213
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL--GIRLGLEDYTVI 384
PDKAL+LF + D +HVT+ VLSA A++ +L GR V S R+ + + T+
Sbjct: 214 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNV-NLTLA 272
Query: 385 NALVDMYAKCHVIADARYIFETTSEKD-------------------------------VI 413
NA++DMY KC I DA+ +F+ EKD ++
Sbjct: 273 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIV 332
Query: 414 AWNSIISGLDDNVSPDA------------------VTLVSVISACASLGAVQVGSSLHAY 455
AWN++IS + N P+ +TLVS +SACA +GA+++G +H+Y
Sbjct: 333 AWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSY 392
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K G+ N YV +AL++ Y+KCGD + AR VF+++ +++ WSAMIGG M G G
Sbjct: 393 IKKNGI-KMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSE 451
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
++ +F M V+PN V FT + ACSHTG+V E FY M + VP KHY C+V
Sbjct: 452 AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIV 511
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
D+L R+G LE+A++F+E MPI P S++GA L C +++ L E+ ++LEL P
Sbjct: 512 DVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDG 571
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+VL+SN+YA G+W V+++R+ M+ GL K PGCS +++D
Sbjct: 572 AHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEID 613
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 161/557 (28%), Positives = 272/557 (48%), Gaps = 69/557 (12%)
Query: 14 TKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLI 73
T +P R +++N PT + S H++ +L+ C S LK HA +I
Sbjct: 6 TAQPLSLPRHPNFSNPNQPTTN----NERSRHTI------SLIDRCSSLRQLKQTHAHMI 55
Query: 74 VDGLTNDKCN-TKL--VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN-DLYKD 129
G+ +D + +KL ++ SF ++YAR VFD +P P+ +++ +IR Y D
Sbjct: 56 RTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYASGPDPVCS 115
Query: 130 IVEFYKCMRKRLKEHDN-FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLV 187
I F + + + N + F ++KA E+ + G +H +K G D FV L+
Sbjct: 116 IWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLI 175
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
Y C D+ S+ +VF +K+VVSW SMI G+VQ + L LF +M V+ + +
Sbjct: 176 HCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHV 235
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T+ +++ACAK+R L G+ + YI + + +N L A+LDMY KCG+I DA+ +FD +
Sbjct: 236 TMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAM 295
Query: 308 CSIDLVSWTAMIVGYT-------------------------------QSGYPDKALKLFT 336
D V+WT M+ GY Q+G P++AL +F
Sbjct: 296 EEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFH 355
Query: 337 DKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
+ + N +T+ S LSA AQ+G L +GR +HS + G++ ++ V +AL+ MY+KC
Sbjct: 356 ELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKC 415
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVI 437
+ AR +F + ++DV W+++I GL + NV P+ VT +V
Sbjct: 416 GDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVF 475
Query: 438 SACASLGAVQVGSSL-HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EK 495
AC+ G V SL + + G++ + + +++ + G + A +AM
Sbjct: 476 CACSHTGLVDEAESLFYKMESSYGIVPEDKHYA-CIVDVLGRSGYLEKAVKFIEAMPIPP 534
Query: 496 NTVTWSAMIGGYGMQGD 512
+T W A++G + +
Sbjct: 535 STSVWGALLGACKIHAN 551
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 199/423 (47%), Gaps = 71/423 (16%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV--KCGNIRDARSVFDELC 308
SL+ C+ LR L Q H ++++ G+ + + + L + ++ AR VFDE+
Sbjct: 36 SLIDRCSSLRQLKQ---THAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIP 92
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ +W +I Y P ++ F D + +PN T ++ A+A++ +L++G
Sbjct: 93 QPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLG 152
Query: 367 RMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ +H + I+ + D V N+L+ Y C + A +F T EKDV++WNS+I+G
Sbjct: 153 QSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 212
Query: 426 VSPDA-----------------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
SPD VT+V V+SACA + ++ G + +Y ++ ++ N+ +
Sbjct: 213 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSY-IEENRVNVNLTL 271
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM------------------- 509
A+L+ Y KCG + A+ +FDAM EK+ VTW+ M+ GY +
Sbjct: 272 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDI 331
Query: 510 ------------QGDGGGSLALFSDM-LNEEVQPNEVIFTTILSACSHTGMVGEG-WKCF 555
G +L +F ++ L + ++ N++ + LSAC+ G + G W
Sbjct: 332 VAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHS 391
Query: 556 YSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF-----LH 608
Y K M YV ++ + ++ G LE+A E ++ + DV ++ A +H
Sbjct: 392 YIKKNGIK----MNFYVTSALIHMYSKCGDLEKAREVFNSVE-KRDVFVWSAMIGGLAMH 446
Query: 609 GCG 611
GCG
Sbjct: 447 GCG 449
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/609 (30%), Positives = 328/609 (53%), Gaps = 20/609 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T LV++Y G + A SVFD++P + ++ +I Y +E + M
Sbjct: 175 GTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGV 234
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQ 201
D FV + AC L ++ G ++H + D+ V+ L+D+Y KC + +R+
Sbjct: 235 RPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARR 294
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FD ++N+VSWT+MIAGY+QN E + +F ++ + + + S++ +C L A
Sbjct: 295 LFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAA 354
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+ QG+ +H +++K +E + ++ AL+DMY KC ++ +AR+VF+ L D +S+ AMI G
Sbjct: 355 IWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEG 414
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Y + G A+++F ++ P+ +T S+L S+ +L + + +H L ++ G D
Sbjct: 415 YARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLD 474
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
+AL+D+Y+K ++ DA+ +F +D++ WN++I GL N
Sbjct: 475 LYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRV 534
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
++P+ T V++++ ++L ++ G HA K G S+ ++ AL++ YAKCG +
Sbjct: 535 SGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGA-DSDPHISNALIDMYAKCGFIE 593
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
R++F++ K+ + W++MI Y G +L +F M V+PN V F ++LSAC+
Sbjct: 594 EGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACA 653
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G+V EG F SM + P +HY +V+L R+G+L A EF+E MPIEP +++
Sbjct: 654 HAGLVDEGLHHFNSMKTKYAVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIW 713
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
+ L C L+ ++G + L P + VL+SN+YAS G W ++R+ M
Sbjct: 714 RSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCA 773
Query: 664 GLSKSPGCS 672
G+ K PG S
Sbjct: 774 GVVKEPGYS 782
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 191/658 (29%), Positives = 303/658 (46%), Gaps = 64/658 (9%)
Query: 65 LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
L HA +V GL D L+ Y G + AR +FDSMP+ + S+ I Y
Sbjct: 49 LPPAHARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQ 108
Query: 124 NDLYKDIVEFYKCM------RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
+ D + + + + F+ + L+AC + R G +VH K+G
Sbjct: 109 HGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGL 168
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
+ FV T LV++YAK I ++ VFD +N V+WT++I GY Q A L LF R
Sbjct: 169 DANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGR 228
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M V ++ L S +AC+ L + G+ +HGY + E ++ +V AL+D+Y KC
Sbjct: 229 MGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSR 288
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ AR +FD + + +LVSWT MI GY Q+ +A+ +F A + P+ S+L++
Sbjct: 289 LLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNS 348
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
L + GR VH+ I+ LE D V NAL+DMYAKC + +AR +FE +E D I++
Sbjct: 349 CGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISY 408
Query: 416 NSIISG---LDD--------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
N++I G L D ++ P +T VS++ +S +++ +H K
Sbjct: 409 NAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVK 468
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G S ++Y G+AL++ Y+K A++VF M+ ++ V W+AMI G G ++
Sbjct: 469 SG-TSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVK 527
Query: 519 LFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEG---------------W 552
LF+ + + PNE F +++ S H ++ G
Sbjct: 528 LFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGADSDPHISNALIDMYA 587
Query: 553 KCFYSMCRDFKFVPSM-KHYVC---MVDLLARAGRLEEALE---FMENMPIEPDVSLFGA 605
KC + F ++ K +C M+ A+ G EEAL ME +EP+ F +
Sbjct: 588 KCGFIEEGRLLFESTLGKDVICWNSMISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVS 647
Query: 606 FLHGCGLYSRFDLGEVMIKKM---LELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
L C D G M + P +Y V NL+ G+ + E M
Sbjct: 648 VLSACAHAGLVDEGLHHFNSMKTKYAVEPGTE-HYASVVNLFGRSGKLHAAKEFIERM 704
>gi|242062998|ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
gi|241932619|gb|EES05764.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
Length = 662
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 229/654 (35%), Positives = 335/654 (51%), Gaps = 37/654 (5%)
Query: 52 CLNLLGLCKSTGS------LKAFHALLIVDG--LTNDKCNTKLVSMYGSFGHVKYARSVF 103
CL LL KS+ + HALL+ G L D + L+ Y + G A ++
Sbjct: 10 CLALLLRSKSSATPLVPTTAAQLHALLLKSGHLLHCDSIHL-LLGSYCACGRPFDAHNLL 68
Query: 104 DSMPNPDFYSF-QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
MP P S ++R Y + + Y MR D+ F+ KAC +LR
Sbjct: 69 VQMPQPPPVSVSNTLLRSYTGLGFNRQALALYSQMRA----FDHLTFTFAAKACADLRRR 124
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
G VH + G G D +V LV MY +CRD+ S+ VF + VSW ++I G
Sbjct: 125 RHGRAVHGRALTAGFGGDGYVQNALVSMYMRCRDVVSAEAVFGALRSRTTVSWNTVITGC 184
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
V++ A+ L +F M V ++ T+ S++ ACA+ R LH G+ +H + G+ +
Sbjct: 185 VKDGRAERALEVFETMVGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNYA 244
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDK-K 339
+ AL+DMY KC ++ DA+ VFDE D+VSWTAMI Y + + KA L ++
Sbjct: 245 AVKNALIDMYGKCRSLEDAKRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAFALGSEMLV 304
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIA 398
++ PN VT+ +LSA L + + H+L IRLGL TV+ ALVD YAKC +
Sbjct: 305 TSEAQPNAVTMVHLLSACTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDCYAKCGYMG 364
Query: 399 DARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACA 441
+ E S + WN+ ISG L ++V PD+ T+ SVI A A
Sbjct: 365 MIDMVVEKGSRR-TETWNAAISGYTHREQGKKALALFKQMLAESVRPDSATMASVIPAYA 423
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+ ++H +G L S + T L+N YAK GD A +F + EK+ V W+
Sbjct: 424 ESADLVQAKNIHCCLLIRGCLGST-DIATGLINVYAKAGDLGVAWELFQCLPEKDVVAWT 482
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
+I GYGM G ++ L+S M+ V PN V +++ +CSH GMV EG + F M
Sbjct: 483 TVIAGYGMHGHAQTAILLYSRMIEMGVTPNTVTMASLMYSCSHAGMVDEGLRLFNDMRGV 542
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
+P+ +HY+C+VD+L RAGR+EEA +++MP EP S++ A L C L+ + GEV
Sbjct: 543 HGLMPNAEHYLCLVDMLGRAGRIEEAYRLIQDMPFEPSTSVWSALLGACVLHENVEFGEV 602
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
K + EL PD YVL+ +YA+ RW V + +M+ RGL K PG S+VD
Sbjct: 603 AAKHLFELEPDNVGNYVLLGKVYAAADRWSDVQDLWRVMEGRGLHKDPGSSVVD 656
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 209/637 (32%), Positives = 338/637 (53%), Gaps = 35/637 (5%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA I GL +N + LVSMY ++ A VF+++ + + MIR Y N
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGES 409
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++E + M+ D+F F+ +L C D++ G + H I+K + FV L
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNAL 469
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VDMYAKC + +RQ+F+ D++ V+W ++I YVQ++ E LF RM + +
Sbjct: 470 VDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
L S + AC + L+QGK +H +K G++ + H ++L+DMY KCG I+DAR VF
Sbjct: 530 ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
L +VS A+I GY+Q+ ++A+ LF + P+ +T A+++ A + +L +G
Sbjct: 590 LPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG 648
Query: 367 RMVHSLGIRLGLE---DYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGL 422
H + G +Y I +L+ MY + +A +F E +S K ++ W ++SG
Sbjct: 649 TQFHGQITKRGFSSEGEYLGI-SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 423 DDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA--YSTKQGL-- 461
N V PD T V+V+ C+ L +++ G ++H+ + L
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALF 520
L+SN L++ YAKCGD + + VFD MR + N V+W+++I GY G +L +F
Sbjct: 768 LTSNT-----LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
M + P+E+ F +L+ACSH G V +G K F M + + H CMVDLL R
Sbjct: 823 DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGR 882
Query: 581 AGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
G L+EA +F+E ++PD L+ + L C ++ GE+ +K++EL P + YVL+
Sbjct: 883 WGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLL 942
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
SN+YAS G W + N +R++M+ RG+ K PG S +D++
Sbjct: 943 SNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVE 979
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 175/663 (26%), Positives = 318/663 (47%), Gaps = 110/663 (16%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
KA H+ ++ G+ ++ + +V +Y V YA FD + + W +
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD-------VTAWNSML 132
Query: 125 DLYKDIVEFYKCMRKRLKEHDN------FVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
+Y I + K +R + +N F FS VL C +++ G ++HC ++K+G
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
+S+ LVDMYAKC I +R+VF+ +D N V WT + +GYV+ +E +++F RM
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R+ EG++ + VT +++ Y++ G +
Sbjct: 253 RD---EGHRPDHLAFVT--------------------------------VINTYIRLGKL 277
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+DAR +F E+ S D+V+W MI G+ + G A++ F + + + T+ SVLSA
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 358 AQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ NL++G +VH+ I+LGL + V ++LV MY+KC + A +FE EK+ + WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I G N + D T S++S CA+ +++GS H+ K+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L+ N++VG AL++ YAKCG + AR +F+ M +++ VTW+ +IG Y + + L
Sbjct: 458 K-LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK--CFYSMC---RDFKFVPSMKHYVCM 574
F M + + + L AC+H + +G + C C RD S +
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS------L 570
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE--VMIKKMLE--LH 630
+D+ ++ G +++A + ++P E V A + G YS+ +L E V+ ++ML ++
Sbjct: 571 IDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAG---YSQNNLEEAVVLFQEMLTRGVN 626
Query: 631 PDKACYYVLVSNL--------------------YASDGRWIRVNQVRELMKQRGLSKSPG 670
P + + +V ++S+G ++ ++ + M RG++++
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA-- 684
Query: 671 CSL 673
C+L
Sbjct: 685 CAL 687
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 185/656 (28%), Positives = 294/656 (44%), Gaps = 97/656 (14%)
Query: 66 KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H +I GL N C LV MY + AR VF+ + +P+ + + Y
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT 184
L ++ V ++ MR DEG + PD
Sbjct: 240 GLPEEAVLVFERMR------------------------DEGHR----------PDHLAFV 265
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
+++ Y + + +R +F E +VV+W MI+G+ + C + F MR+ V+
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ TLGS+++A + L G +H +K+G+ N ++ ++L+ MY KC + A VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ L + V W AMI GY +G K ++LF D K + + + T S+LS A +L
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 365 MGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
MG HS+ I+ L ++ V NALVDMYAKC + DAR IFE ++D + WN+II
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 423 -DDNVSP---------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
D+N S D L S + AC + + G +H S K G L ++
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG-LDRDL 564
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ G++L++ Y+KCG + AR VF ++ E + V+ +A+I GY Q + ++ LF +ML
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTR 623
Query: 527 EVQPNEVIFTTILSAC----------------SHTGMVGEGWKCFYSM------------ 558
V P+E+ F TI+ AC + G EG S+
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTE 683
Query: 559 -CRDFKFVPSMKHYVCMVDLL---ARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCG 611
C F + S K V ++ ++ G EEAL+F + M + PD + F L C
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSN----LYASDGRWIRVNQVRELMKQR 663
+ S G + + L D L SN +YA G +QV + M++R
Sbjct: 744 VLSSLREGRAIHSLIFHLAHD---LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 262/537 (48%), Gaps = 67/537 (12%)
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G VH + + +G + + +VD+YAKC + + + FD L+K+V +W SM++ Y
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMY-- 135
Query: 224 NDCAQEGLVL--FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
+ + G VL F + E + N+ T +++ CA+ + G+ +H ++K+G+E NS
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ AL+DMY KC I DAR VF+ + + V WT + GY ++G P++A+ +F +
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADAR 401
P+H+ +V++ +LG L DAR
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLK----------------------------------DAR 281
Query: 402 YIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLG 444
+F S DV+AWN +ISG +V TL SV+SA +
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+ +G +HA + K G L+SN+YVG++L++ Y+KC ++A VF+A+ EKN V W+AMI
Sbjct: 342 NLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GY G+ + LF DM + ++ FT++LS C+ + + G + F+S+ K
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKL 459
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV---SLFGAFLHGCGLYSRFDLGEV 621
++ +VD+ A+ G LE+A + E M +V ++ G+++ FDL +
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS--PGCSLVDL 676
M + + D AC + G + + QV L + GL + G SL+D+
Sbjct: 520 M--NLCGIVSDGACLASTLKACTHVHGLY-QGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 21/282 (7%)
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
AL GK +H L +GI+ L A++D+Y KC + A FD L D+ +W +M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
Y+ G P K L+ F FPN T + VLS A+ N+ GR +H I++GLE
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 381 YTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISA 439
+ ALVDMYAKC I+DAR +FE + + + W + SG P+ LV
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV----- 248
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
+G ++ T ++N Y + G + AR++F M + V
Sbjct: 249 -------------FERMRDEGHRPDHLAFVT-VINTYIRLGKLKDARLLFGEMSSPDVVA 294
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
W+ MI G+G +G ++ F +M V+ ++LSA
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 224/682 (32%), Positives = 345/682 (50%), Gaps = 96/682 (14%)
Query: 49 SIPCLNL-LGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGS---FGHVKYARSVFD 104
++P L L C++ + +I+ G D + + + F ++ + +F
Sbjct: 25 TLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFS 84
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC-ELRDID 163
+ NP+ + M++ Y + + YK M + DN+ + + ++C L + D
Sbjct: 85 HIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFD 144
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G + ++KVG D ++ L++MYA C ++ +R+VFD + ++VSW SM+AGYV
Sbjct: 145 -GKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYV 203
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
+E +++RM E V I NS
Sbjct: 204 LVGNVEEAKDVYDRMPERNV----------------------------------IASNSM 229
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+V ++ K GN+ +A +F+E+ DLVSW+A+I Y Q+ ++AL LF +
Sbjct: 230 IV-----LFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANG 284
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADAR 401
+ V + SVLSA ++L + G++VH L +++G+E Y + NAL+ MY+ C + A+
Sbjct: 285 IMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQ 344
Query: 402 YIFETTSEKDVIAWNSIISGL------------------DDNVS---------------- 427
+F + D I+WNS+ISG DNVS
Sbjct: 345 KLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTE 404
Query: 428 --------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
PD LVSVISAC L A+ G +HAY K GL N+ +GT L+
Sbjct: 405 TLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGL-KINIILGTTLI 463
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
N Y K G + A VF + EK TW+A+I G M G SL FS+M V PNE+
Sbjct: 464 NMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEI 523
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +L AC H G+V EG + F SM ++ K P++KHY CMVDLL RAG L+EA E +E+
Sbjct: 524 TFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIES 583
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
MP+ PDVS +GA L C Y + GE + +K++ELHPD + VL+SN+YAS G W+ V
Sbjct: 584 MPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDV 643
Query: 654 NQVRELMKQRGLSKSPGCSLVD 675
+VR +M+Q G+ K+PGCS+++
Sbjct: 644 LEVRGMMRQHGVVKTPGCSMIE 665
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/515 (34%), Positives = 296/515 (57%), Gaps = 20/515 (3%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
F++ LV+ + ++ +R++FD+ D +V W +++ Y ++ + ++ RM+
Sbjct: 108 FLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVA 167
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V + + ++ AC+ L AL G+ +HG I + G E + + L+ +Y KCG I A
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRA 227
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+VF L +VSWT++I GY Q+G P +AL++F++ + + P+ + + SVL A +
Sbjct: 228 NAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDV 287
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+L G+ +H I++GLE ++ ++ +L +YAKC + AR F +I WN++I
Sbjct: 288 EDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMI 347
Query: 420 SGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
SG N+ PD++T+ S I+ACA +G++++ + Y
Sbjct: 348 SGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEY-ISMSEF 406
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
++V V T+L++ YAKCG AR VFD + +K+ V WSAM+ GYG+ G G S+ LF
Sbjct: 407 RNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHA 466
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M V PN+V F +L+AC ++G+V EGW F+ M RD+ P +HY C+VDLL RAG
Sbjct: 467 MRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAG 525
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
L+ A F+ NMPIEP VS++GA L C ++ LGE +++ L P +YV +SN
Sbjct: 526 HLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSN 585
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
LYAS W V +VR LM+++GL+K G S+++++
Sbjct: 586 LYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEIN 620
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 240/463 (51%), Gaps = 22/463 (4%)
Query: 65 LKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
L +A L+V GL KLV+ + G V AR +FD P+PD + + ++R Y
Sbjct: 91 LNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSR 150
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+ + +E Y M+ D F F VLKAC L ++ G +VH +I + G D FV
Sbjct: 151 HGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFV 210
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
GLV +YAKC +I + VF +D+ +VSWTS+I+GY QN E L +F+ MR+ V
Sbjct: 211 QNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNV 270
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ I L S++ A + L GK +HG ++K+G+E L+ +L +Y KCG++ AR
Sbjct: 271 RPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARL 330
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F+++ + L+ W AMI GY ++GY ++A++LF K + P+ +T+ S ++A AQ+G+
Sbjct: 331 FFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGS 390
Query: 363 LNMGR-MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L + R M + + D V +L+D YAKC + AR++F+ +KDV+ W++++ G
Sbjct: 391 LELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVG 450
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
VSP+ VT V +++AC + G V+ G L G+
Sbjct: 451 YGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPR 510
Query: 465 NVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGG 506
+ + +++ + G A V + E W A++
Sbjct: 511 HQHYA-CVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSA 552
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 329/613 (53%), Gaps = 20/613 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L+ +Y G+++ AR VFD +P D + VM+R Y + + + + + MR
Sbjct: 151 SALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSM 210
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQV 202
++ ++ +L C + G ++H ++ G D V LV MY+KC ++ +R++
Sbjct: 211 VNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKL 270
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ + V+W +IAGYVQN E LFN M V+ + +T S + + + +L
Sbjct: 271 FNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSL 330
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
K +H YI++ + + +L +AL+D+Y K G++ AR +F + +D+ TAMI GY
Sbjct: 331 RHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGY 390
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-Y 381
G A+ F N +T+ASVL A A + L G+ +H ++ LE+
Sbjct: 391 VLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIV 450
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP------------- 428
V +A+ DMYAKC + A F S++D + WNS+IS N P
Sbjct: 451 NVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMS 510
Query: 429 ----DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
D+V+L S +SA A+L A+ G +H Y + SS+ +V + L++ Y+KCG+
Sbjct: 511 GAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAF-SSDTFVASTLIDMYSKCGNLAL 569
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A VF+ M KN V+W+++I YG G L L+ +ML + P+ V F I+SAC H
Sbjct: 570 AWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGH 629
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G+V EG F+ M R++ M+HY CMVDL RAGR+ EA + +++MP PD ++G
Sbjct: 630 AGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWG 689
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
L C L+ +L ++ + +LEL P + YYVL+SN++A G W V +VR LMK++G
Sbjct: 690 TLLGACRLHGNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKG 749
Query: 665 LSKSPGCSLVDLD 677
+ K PG S +D++
Sbjct: 750 VQKIPGYSWIDVN 762
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/605 (27%), Positives = 287/605 (47%), Gaps = 39/605 (6%)
Query: 66 KAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ H +IV G+ D C +++++ +Y G + A ++F + + MIR ++
Sbjct: 31 RQVHTQVIVGGM-GDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRGLYM 89
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+ + FY M D + F V+KAC L ++ M VH +G D F
Sbjct: 90 LGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFA 149
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ L+ +YA I +R+VFDE ++ + W M+ GYV++ + F MR +
Sbjct: 150 GSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYS 209
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N +T +++ CA G LHG ++ G E + + L+ MY KCGN+ AR
Sbjct: 210 MVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARK 269
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F+ + D V+W +I GY Q+G+ D+A LF A P+ VT AS L + + G+
Sbjct: 270 LFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGS 329
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L + VHS +R + D + +AL+D+Y K + AR IF+ DV ++ISG
Sbjct: 330 LRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISG 389
Query: 422 -----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ + + +++T+ SV+ ACA++ A++ G LH + K+ L +
Sbjct: 390 YVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKK-RLEN 448
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V VG+A+ + YAKCG A F M ++++V W++MI + G ++ LF M
Sbjct: 449 IVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMG 508
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF----KFVPSMKHYVCMVDLLAR 580
+ + V ++ LSA ++ + G + + R+ FV S ++D+ ++
Sbjct: 509 MSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVAST-----LIDMYSK 563
Query: 581 AGRLEEALEFMENMPIEPDV---SLFGAF-LHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
G L A M + +V S+ A+ HGC DL M++ +HPD +
Sbjct: 564 CGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPREC-LDLYHEMLRA--GIHPDHVTF 620
Query: 637 YVLVS 641
V++S
Sbjct: 621 LVIIS 625
>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/632 (32%), Positives = 337/632 (53%), Gaps = 22/632 (3%)
Query: 66 KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H ++ GL D T L+ MYG G + AR VFD + D S+ ++ Y N
Sbjct: 122 RKVHGRIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVEN 181
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV-KVGGPDSFVL 183
++ +E + M D+ V +AC ++ + VH ++ K D+ +
Sbjct: 182 GRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLR 241
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+ MY +C + ++ +F+ D + WTSMI+ QN C +E + F +M+E VE
Sbjct: 242 NSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVE 301
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE-INSHLVTALLDMYVKCGNIRDARS 302
N +T+ S++ CA+L L +GK +H +IL+ ++ + L AL+D Y C I
Sbjct: 302 VNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEK 361
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+ + + +VSW +I Y + G ++A+ LF P+ ++AS +SA A +
Sbjct: 362 LLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASS 421
Query: 363 LNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+ G+ +H + G D V N+L+DMY+KC + A IF+ EK ++ WN +I G
Sbjct: 422 VRFGQQIHGHVTKRGFADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGF 481
Query: 423 DDN-VSPDA----------------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
N +S +A VT +S I AC++ G + G +H G+ +
Sbjct: 482 SQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGV-QKD 540
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+Y+ TAL++ YAKCGD ++A+ VF++M EK+ V+WSAMI YG+ G + LF+ M+
Sbjct: 541 LYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVE 600
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
++PNEV F ILSAC H G V EG K +++ RD+ VP+ +H+ +VDLL+RAG ++
Sbjct: 601 SHIKPNEVTFMNILSACRHAGSVEEG-KFYFNSMRDYGIVPNAEHFASIVDLLSRAGDID 659
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
A E +++ D S++GA L+GC ++ R DL + K++ E+ + YY L+SN+YA
Sbjct: 660 GAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKELREIRTNDTGYYTLLSNIYA 719
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
G W +VR M+ GL K PG S +++D
Sbjct: 720 EGGNWYESRKVRSRMEGMGLKKVPGYSSIEID 751
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 321/613 (52%), Gaps = 38/613 (6%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
C + SL HA L+V GL +D +TKL+ Y G + +R VF++ P+PD + F V+
Sbjct: 11 CSTLRSLSQLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVL 70
Query: 118 IRWYFLNDLYKDIVEFYKCMRK---RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
I+ Y + L+ +V Y + RL ++ F++ V+KA + + G KVH IVK
Sbjct: 71 IKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVK 130
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
G G D + T L+ MY + + +R+VFDE +++VSW+S++A YV+N +EGL +
Sbjct: 131 TGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEM 190
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
M V + +T+ S+ AC K+ L K +HGY+++ + ++ L +L+ MY +
Sbjct: 191 LRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQ 250
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
C +R A+ +F+ + WT+MI Q+G ++A+ F + ++ N VT+ SV
Sbjct: 251 CSYLRGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISV 310
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLE--DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
L A+LG L G+ VH +R ++ D + AL+D YA C I+ +
Sbjct: 311 LCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSS 370
Query: 412 VIAWNSIIS-----GLDDN------------VSPDAVTLVSVISACASLGAVQVGSSLHA 454
V++WN++IS GL++ + PD+ +L S ISACA +V+ G +H
Sbjct: 371 VVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHG 430
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+ TK+G ++ +V +L++ Y+KCG A +FD + EK+ VTW+ MI G+ G
Sbjct: 431 HVTKRGF--ADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISV 488
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG-W---KCFYSMCRDFKFVPSMKH 570
+L LF +M + NEV F + + ACS++G + +G W K S + ++ +
Sbjct: 489 EALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDT--- 545
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
+VD+ A+ G L+ A +MP E V + A + G++ + + KM+E H
Sbjct: 546 --ALVDMYAKCGDLKTAQGVFNSMP-EKSVVSWSAMIAAYGIHGQITAATTLFTKMVESH 602
Query: 631 --PDKACYYVLVS 641
P++ + ++S
Sbjct: 603 IKPNEVTFMNILS 615
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 186/377 (49%), Gaps = 13/377 (3%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
C LG K S+ F +DG D L+ Y + + + + N
Sbjct: 313 CCARLGWLKEGKSVHCFILRREMDGADLD-LGPALMDFYAACWKISSCEKLLCLIGNSSV 371
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ +I Y L ++ + + CM ++ D+F + + AC + G ++H
Sbjct: 372 VSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGH 431
Query: 172 IVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+ K G D FV L+DMY+KC + + +FD+ +K++V+W MI G+ QN + E L
Sbjct: 432 VTKRGFADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEAL 491
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
LF+ M ++ N++T S + AC+ L +GKW+H ++ G++ + ++ TAL+DMY
Sbjct: 492 KLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMY 551
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
KCG+++ A+ VF+ + +VSW+AMI Y G A LFT + PN VT
Sbjct: 552 AKCGDLKTAQGVFNSMPEKSVVSWSAMIAAYGIHGQITAATTLFTKMVESHIKPNEVTFM 611
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI------NALVDMYAKCHVIADARYIFE 405
++LSA G++ G+ + + DY ++ ++VD+ ++ I A I +
Sbjct: 612 NILSACRHAGSVEEGKFYFN-----SMRDYGIVPNAEHFASIVDLLSRAGDIDGAYEIIK 666
Query: 406 TTSEK-DVIAWNSIISG 421
+T + D W ++++G
Sbjct: 667 STCQHIDASIWGALLNG 683
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 225/758 (29%), Positives = 372/758 (49%), Gaps = 100/758 (13%)
Query: 3 LISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKST 62
++SL H+ + LQ R + +PT F + L S +L L +S
Sbjct: 1 MLSLKPTHLFKHCSSLLQQRLYC-----SPTWSHEPNDFNYLNHLLSNQISSLKTLLQS- 54
Query: 63 GSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
HA +I G +N+ +KL+S+Y SF + +FD +P+ D + + +I+ +
Sbjct: 55 ------HAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAH 108
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPD 179
F N Y ++FY+ MR ++F ++ +C EL ++ G +H + K+G
Sbjct: 109 FSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGS 168
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
S V + V MY+KC + + VFDE L ++VV+WT+++ G VQN ++ GL M
Sbjct: 169 SAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHR 228
Query: 240 GFVEG---NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+G N TL AC L AL +G+ LHG ++K G++ + + + LL MY KCGN
Sbjct: 229 IGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGN 288
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+A F E+ + D++SWT+MI Y++ G+ + + +F + + +P+ + I+ +LS+
Sbjct: 289 PEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSS 348
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ + + H L IR D V NAL+ MY K + A F +E++ AW
Sbjct: 349 FSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAW 408
Query: 416 NSIISG------------------LDDNVS--------------------------PDAV 431
N ++SG +D+NVS D V
Sbjct: 409 NLMVSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPRDIV 468
Query: 432 TLVSVISACASLG-----------------------------------AVQVGSSLHAYS 456
T ++IS+ A G +++ G +H Y
Sbjct: 469 TWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNY- 527
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
G N+ + TAL++ YAKCG + +R +F++M E++ +TW+ MI GYGM GD +
Sbjct: 528 INGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSA 587
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
+ F M +PN + F +LSAC+H G+V EG K + +D+ P++KHY CMVD
Sbjct: 588 IEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEG-KYLFGKMQDYSVAPNLKHYACMVD 646
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
LL R+G L+EA + +MPI PD ++GA L C +++ ++G + K ++ + Y
Sbjct: 647 LLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGY 706
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
YV++SN+Y+S G+W + R +MK+RG+ K G S V
Sbjct: 707 YVMISNMYSSIGKWEEAEKARGIMKERGVRKKTGWSAV 744
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 211/623 (33%), Positives = 335/623 (53%), Gaps = 32/623 (5%)
Query: 82 CN---TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD--IVEFYKC 136
CN L+ Y GH+ A+ VF+++ + + S+ +I N ++E ++
Sbjct: 42 CNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRR 101
Query: 137 MRKRLKEHDNFVFSKVLKACC-ELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCR 194
M D F V A L + +VH +K D FV + LV+ Y K
Sbjct: 102 MIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVG 161
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN--QITLGSL 252
+ +R++FD ++N+VSWT+MI+GY A+E L +F MR VEGN + S+
Sbjct: 162 CVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMR--LVEGNLNEFVFTSV 219
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
++A + GK +H ++K G+ ++ AL+ MY KCGN+ + +F+ +
Sbjct: 220 LSALVCPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNA 279
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
++W+A+I GY+Q+G KALKLF+ +A F P+ T+ VL A + + + G+ H
Sbjct: 280 ITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGY 339
Query: 373 GIRLGLED--YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----- 425
++ G E YT ALVDMYAK DAR F+ E D++ W SII+G N
Sbjct: 340 LLKSGYETQIYTA-TALVDMYAKFGFTGDARKGFDFLLEPDLVLWTSIIAGYVQNGKNEE 398
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
+ P+ +T+ SV+ AC++L A++ G +HA + K GL + + +AL
Sbjct: 399 ALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHARTIKYGL-GPELSIRSALS 457
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
YAKCG + ++F M +++ V+W+AMI G G G +L LF +M E +P+ +
Sbjct: 458 TMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGREALELFEEMRLEGTKPDHI 517
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F T+LSACSH G+V GW F M +F VP ++HY CMVD+L+RAG+L EA EF+E+
Sbjct: 518 TFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMVDVLSRAGKLNEAKEFIES 577
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
I+ + L+ L C + ++LG +K++EL ++ YVL+S++Y + GR V
Sbjct: 578 AIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESSAYVLLSSIYTAMGRLADV 637
Query: 654 NQVRELMKQRGLSKSPGCSLVDL 676
+VR +MK RG+ K GCS ++L
Sbjct: 638 VRVRRMMKVRGVRKETGCSWIEL 660
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 213/444 (47%), Gaps = 49/444 (11%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
+L+ A ++L +G+ LH +I+KI + ++L L+ Y KCG++ A+ VF+ L
Sbjct: 12 NLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKH 71
Query: 310 IDLVSWTAMIVGYTQSGYPDK--ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG- 366
++VS+ +I G + +G L+LF + P+ T V +A+A LN+G
Sbjct: 72 KNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAA----LNLGC 127
Query: 367 ----RMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
R VH LGI+ ++D V ++LV+ Y K + +AR +F+ E+++++W ++ISG
Sbjct: 128 NFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISG 187
Query: 422 L-DDNVSPDAV----------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
++ +A+ SV+SA V G +H K G+L
Sbjct: 188 YASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLEF 247
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V V AL+ YAKCG+ + M+F+ +KN +TWSA+I GY GD +L LFS M
Sbjct: 248 -VSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMH 306
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
P+E +L ACS + EG + + + + + +VD+ A+ G
Sbjct: 307 YAGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKS-GYETQIYTATALVDMYAKFGFT 365
Query: 585 EEALEFMENMPIEPDVSLFGAFLHG----------CGLYSRFDLGEVMIKKMLELHPDKA 634
+A + + + +EPD+ L+ + + G +Y R + +++ ++ KA
Sbjct: 366 GDARKGFDFL-LEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKA 424
Query: 635 CYYVLVSNLYA-SDGRWIRVNQVR 657
C SNL A G+ I ++
Sbjct: 425 C-----SNLAALEQGKQIHARTIK 443
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P + +++ A +++ G LHA+ K LSS Y+ L+ FYAKCG A++
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGS--LALFSDMLNEEVQPNEVIFTTILSACS 543
VF+ ++ KN V+++ +I G G G + L LF M+ + P+ F + +A +
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAA 122
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 313/553 (56%), Gaps = 21/553 (3%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVF 203
D + + VLKAC L + G ++H ++K G D FV + L++MYAKC + ++F
Sbjct: 105 DFYTYPVVLKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLF 164
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
DE ++V W ++I+ Y ++ A+ L F++M+E E N +T +V++C +L L
Sbjct: 165 DEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLE 224
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
+GK +H +++ I +++ +++AL+DMY KCG + A+ VF+++ + ++W AMI GY+
Sbjct: 225 RGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYS 284
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
G ++L P +T+ S++ AS++ L G+ +H +R ++ D
Sbjct: 285 LKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIF 344
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------LDDN----- 425
+ +L+D Y KC ++ A IF T S+ +V++WN +ISG + DN
Sbjct: 345 IDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHH 404
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V PDA+T S +SAC+ L A+ G LH Y L +N V ALL+ YAKCGD A
Sbjct: 405 VKPDALTFSSTLSACSQLAALDKGRELH-YCIINHKLEANEIVMGALLDMYAKCGDVDEA 463
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R +F + +++ V+W++MI YG G +L LF +M V+ + V F +LSACSH
Sbjct: 464 RKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHA 523
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME-NMPIEPDVSLFG 604
G+V EG+ F M + P ++HY C++DLL RAGRL EA E ++ + D+ L
Sbjct: 524 GLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLS 583
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
C L++ F LG + K ++E+ PD Y+L+SN+YAS +W V +VR MK+ G
Sbjct: 584 TLFSACLLHNNFVLGIQIGKMLIEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELG 643
Query: 665 LSKSPGCSLVDLD 677
L KSPGCS ++++
Sbjct: 644 LKKSPGCSWIEIN 656
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 239/477 (50%), Gaps = 28/477 (5%)
Query: 44 FHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYA 99
F++ P + L C G + + H L+ GL D + L++MY A
Sbjct: 106 FYTYPVV-----LKACGGLGRVIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDA 160
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
+FD P D + +I YF + + ++ + M++ E ++ F+ V+ +C L
Sbjct: 161 IKLFDEFPQRDVGCWNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRL 220
Query: 160 RDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
+++ G +VH E+++ D+FVL+ LVDMY KC + +++VF++ KN ++W +MI
Sbjct: 221 LNLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMI 280
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
GY ++ + L RM + + +TL S++ A ++ L GK++HGYIL+ I+
Sbjct: 281 TGYSLKGDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRID 340
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
++ + +L+D Y KCG + A ++F + ++VSW MI G+ G +AL ++ +
Sbjct: 341 VDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNM 400
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVI 397
K P+ +T +S LSA +QL L+ GR +H I LE + V+ AL+DMYAKC +
Sbjct: 401 KEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCGDV 460
Query: 398 ADARYIFETTSEKDVIAWNSIISG-------------LDD----NVSPDAVTLVSVISAC 440
+AR +F ++D+++W S+I D+ NV D+VT ++V+SAC
Sbjct: 461 DEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSAC 520
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
+ G V G Q + + + L++ + G A + +E +
Sbjct: 521 SHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRS 577
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 22/270 (8%)
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIF 404
++VT+ S L L G+++H G + V++ +L+ Y CH A A +F
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 405 ETTS-EKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGA 445
+T DV WN+++S +N V PD T V+ AC LG
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
V G +H + K GL+ +V+VG++L+N YAKC A +FD +++ W+A+I
Sbjct: 122 VIYGRRIHNHLLKTGLI-WDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVIS 180
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
Y G +L F M +PN V FT ++S+C+ + G + + +
Sbjct: 181 CYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILL 240
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+ +VD+ + G LE A E E +P
Sbjct: 241 DAFV-LSALVDMYGKCGCLEMAKEVFEKIP 269
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 109/249 (43%), Gaps = 23/249 (9%)
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D VTL+S + C S ++ G +H G SN+ + +L+ FY C D SA +V
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCG-FQSNIVLSKSLIGFYFSCHDYASAELV 60
Query: 489 FDAMREKNTVT-WSAMIGGYGMQGDGGGSLALFSDM-LNEEVQPNEVIFTTILSACSHTG 546
F V+ W+A++ Y +L LF + N V+P+ + +L AC G
Sbjct: 61 FQTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLG 120
Query: 547 MVGEGWKCFYSMCRDF----KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
V G + + + FV S ++++ A+ + +A++ + P + DV
Sbjct: 121 RVIYGRRIHNHLLKTGLIWDVFVGS-----SLMNMYAKCDQFVDAIKLFDEFP-QRDVGC 174
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLEL--HPDKACYYVLVSN----LYASDGRWIRVNQV 656
+ A + + ++ KM EL P+ + V+VS+ L G+ +
Sbjct: 175 WNAVISCYFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVH---- 230
Query: 657 RELMKQRGL 665
REL+++R L
Sbjct: 231 RELIERRIL 239
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 216/679 (31%), Positives = 360/679 (53%), Gaps = 32/679 (4%)
Query: 33 TQHELDQTFASFHSLPS-IPCLNLLGLCKSTGSLKAF------HALLIVDGLTNDK-CNT 84
H++ QT+ S + + L K+ +L F H ++V+GL++D +
Sbjct: 29 AHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGS 88
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L+S Y FG + R VFD+M + + +I Y +K MR+ +
Sbjct: 89 SLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQP 148
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVF 203
+ +L +L + +HC I+ G L+ +V+MY KC I +R++F
Sbjct: 149 TSVTLLSLLPGISKL---PLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLF 205
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ +++VSW S+++ Y + +E L L M+ ++ ++ T S ++A A L
Sbjct: 206 ESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLR 265
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +HG +LK G+ I+ H+ +AL+ +Y++C + A VF D+V WTAMI G
Sbjct: 266 LGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLV 325
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q+ DKAL +F ++ P+ T+AS L+A AQLG ++G +H +R G+ D
Sbjct: 326 QNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIP 385
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
N+LV MYAKC+ + + IF EKD+++WN+I++G N
Sbjct: 386 AQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSF 445
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD++T+ S++ AC S GA+ G +H + + L+ + TAL++ Y KCG+ ++A
Sbjct: 446 LRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPC-IMTETALVDMYFKCGNLENA 504
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ FD M +++ V WS +I GYG G G +L +S+ L ++PN VIF ++LSACSH
Sbjct: 505 QKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHG 564
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G++ +G + SM +DF+ P+++H C+VDLL+RAG+++EA F + M EP + + G
Sbjct: 565 GLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGM 624
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C + R +LG+V+ + M EL P +V ++N YAS RW V + M+ GL
Sbjct: 625 LLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGL 684
Query: 666 SKSPGCSLVDLDIANDFSF 684
K PG S +++ F+F
Sbjct: 685 KKYPGWSSIEVH-GTTFTF 702
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 279/536 (52%), Gaps = 28/536 (5%)
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
SF ++ + +++ Y M+K + D + F + KAC L G+ +H +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
V G DS++ + L+ YAK I R+VFD L +NVV WT++I Y +
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
+F +MRE ++ +TL SL+ +KL L LH I+ G E + L ++++MY
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPGISKLPLLLC---LHCLIILHGFESDLALSNSMVNMY 192
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
KCG I DAR +F+ + D+VSW +++ Y++ G ++ L+L K D P+ T
Sbjct: 193 GKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
S LSASA G+L +G++VH L ++ GL D V +ALV +Y +C + A +F++T+EK
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 411 DVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
DV+ W ++ISGL + NV P TL S ++ACA LG +G+S+H
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
Y +QG++ ++ +L+ YAKC Q + +F+ M EK+ V+W+A++ G+ G
Sbjct: 373 GYVLRQGIM-LDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+ F++M ++P+ + T++L AC G + +G K ++ +P +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQG-KWIHNFVLRSSLIPCIMTETA 490
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
+VD+ + G LE A + + M ++ D+ + + G G + GE+ ++K E
Sbjct: 491 LVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGK---GEIALRKYSEF 542
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 210/465 (45%), Gaps = 34/465 (7%)
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
S+ S+++ + L + M++ + + T SL AC L G LH +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
+ G+ +S++ ++L+ Y K G I R VFD + ++V WT +I Y++ G D A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMY 391
+F + + P VT+ S+L + L + +H L I G E D + N++V+MY
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLV 434
KC IADAR +FE+ +D+++WNS++S +++ PD T
Sbjct: 193 GKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
S +SA A G +++G +H K G L+ + +V +AL+ Y +C A VF + E
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDG-LNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
K+ V W+AMI G +L +F M+ V+P+ + L+AC+ G G
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 555 FYSMCRDFKF--VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ R +P+ V M A+ +L+++ M +E D+ + A + G
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTM---YAKCNKLQQSCSIFNKM-VEKDLVSWNAIVAGHAK 427
Query: 613 YSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYAS----DGRWI 651
G +M + L PD L+ ++ G+WI
Sbjct: 428 NGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWI 472
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/613 (31%), Positives = 329/613 (53%), Gaps = 22/613 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ LV MY ++ + VF +P+ ++ S+ I ND ++ +K M+++
Sbjct: 196 SALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIG 255
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
++ V ++C L G ++HC +K G D V T +DMYAKC ++ + ++
Sbjct: 256 VSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKL 315
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F D N+ S+ +MI GY +N+ + LF ++++ ++++L ++A A ++
Sbjct: 316 FSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGH 375
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+G LHG +K + N + A+LDMY KCG + +A +FDE+ D VSW A+I
Sbjct: 376 SEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITAC 435
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR--LGLED 380
Q+ K L F + P+ T SVL A A + G VH I+ +GL+
Sbjct: 436 EQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKM 495
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
+ V +ALVDMY+KC ++ +A I E+ +++WN+IISG L+
Sbjct: 496 F-VGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLE 554
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V PD T +V+ CA+L V +G +HA K LLS +VY+ + L++ Y+KCG+
Sbjct: 555 MGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLS-DVYITSTLVDMYSKCGNMH 613
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ ++F ++++VTW+AMI G+ G G +L LF ML+E ++PN F ++L ACS
Sbjct: 614 DSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACS 673
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G +G F M + P ++HY CMVD+L R+G++EEAL +++MP E D ++
Sbjct: 674 HVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIW 733
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
L C + ++ E +L+L P+ + Y L+SN+YA G W +V+++R+ M+
Sbjct: 734 RTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSH 793
Query: 664 GLSKSPGCSLVDL 676
L K PGCS +++
Sbjct: 794 NLKKEPGCSWIEV 806
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 293/580 (50%), Gaps = 34/580 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKR 140
NT + G+ G ++ A++VF+SMP+ D S+ +I Y N D+ K I F K MR
Sbjct: 94 NTMVFGCAGA-GRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLK-MRDL 151
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGS 198
D+ + LK C L D G+++H V++G D V+TG LVDMYAKC +
Sbjct: 152 GVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGF-DYDVVTGSALVDMYAKCNSLED 210
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
S VF E DKN +SW++ IAG VQND GL LF M+ + +Q T S+ +CA
Sbjct: 211 SLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAG 270
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L A G LH + LK + + TA LDMY KC N+ DA +F L +L S+ AM
Sbjct: 271 LSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAM 330
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I+GY ++ +A KLF + F + V+++ LSA+A + + G +H L I+ L
Sbjct: 331 IIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNL 390
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS---------- 427
+ V NA++DMY KC + +A +F+ +D ++WN+II+ + N S
Sbjct: 391 SSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGA 450
Query: 428 -------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
PD T SV+ ACA A G +H K G + ++VG+AL++ Y+KCG
Sbjct: 451 MLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSG-MGLKMFVGSALVDMYSKCG 509
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ A + + E+ V+W+A+I G+ +Q S FS ML V+P+ + T+L
Sbjct: 510 MMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLD 569
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
C++ VG G + M + + + + +VD+ ++ G + ++L P V
Sbjct: 570 TCANLATVGLGKQIHAQMIK-LELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSV 628
Query: 601 S----LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
+ + G HG G +L E M+ + + P+ A +
Sbjct: 629 TWNAMICGFAYHGLG-EEALELFEHMLHE--NIKPNHATF 665
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 250/548 (45%), Gaps = 60/548 (10%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
FS + + C R + G + H ++ G P FV L+ MY KC + + +VF+E
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 207 LDKNVVSWTSM--------------------------------IAGYVQNDCAQEGLVLF 234
+++VSW +M I+GY+QN Q+ + +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
+MR+ V + TL + C+ L G +HG +++G + + +AL+DMY KC
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKC 205
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
++ D+ VF EL + +SW+A I G Q+ + LKLF + + + T ASV
Sbjct: 206 NSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 355 SASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
+ A L +G +H ++ D V A +DMYAKC ++DA +F + ++
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325
Query: 414 AWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
++N++I G N S D V+L +SA A + G LH +
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLA 385
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K LSSN+ V A+L+ Y KCG A +FD M ++ V+W+A+I G +
Sbjct: 386 IKSN-LSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKT 444
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CM 574
L+ F ML +++P+E + ++L AC+ G + R K +K +V +
Sbjct: 445 LSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVH---GRIIKSGMGLKMFVGSAL 501
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL--HPD 632
VD+ ++ G +EEA + + + VS + A + G L + + + MLE+ PD
Sbjct: 502 VDMYSKCGMMEEAEKIHYRLEEQTMVS-WNAIISGFSLQKKSEDSQRFFSHMLEMGVEPD 560
Query: 633 KACYYVLV 640
Y ++
Sbjct: 561 NFTYATVL 568
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 216/635 (34%), Positives = 328/635 (51%), Gaps = 29/635 (4%)
Query: 67 AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+ H L++ G +N ++ L+SMY +K AR +FD MP D S+ MI Y
Sbjct: 62 SLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRG 121
Query: 126 LYKDIVEFY-----KCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPD 179
L ++ + C +L D F + VLKAC L G VH VK+G D
Sbjct: 122 LNEEACGLFCSMINSCENWKLLVSD-FTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR- 238
FV V MY KC + + FD+ +K++V+W +MI GY QN +E + LF +M
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
EGF + N T ++ A + G+ H +LK+G ++ + TAL+DMY K +I
Sbjct: 241 EGF-KPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIE 299
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
D F E+ +LVS+ A+I GY+ G ++AL++++ + P+ T + S+ +
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359
Query: 359 QLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ G VH ++ GL+ D +V N++V+ Y+KC A FE+ + + + W
Sbjct: 360 VSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAG 419
Query: 418 IISGLDDNVS-----------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
IISG N D + SVI A +S AV+ G LHA+ K G
Sbjct: 420 IISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSG 479
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
L +YVG+A+++ Y+KCG + A+ VF M EKN V+W++MI GY G +L LF
Sbjct: 480 L-DCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLF 538
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
+M + + P V F IL ACSH G+V EG + M ++ PSM+H CMVDLL R
Sbjct: 539 QEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGR 598
Query: 581 AGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
AG LEEA F+ + + ++G+ L CG++ D+G + L L P + Y +
Sbjct: 599 AGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLFLEPHYSSSYTAL 658
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
SN+YAS W V+++R+LMK G+ K PGCS ++
Sbjct: 659 SNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 252/490 (51%), Gaps = 26/490 (5%)
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQ 201
E + +S + AC + +HC I+K G + FV +GL+ MY+K I +R
Sbjct: 38 EPNAITYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARF 97
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF----NRMREGFVEGNQITLGSLVTACA 257
+FD+ +++ VSW SMIAGY Q +E LF N + + TL +++ AC
Sbjct: 98 LFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACG 157
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
L GK +HGY +KIG + + + + + MY KCG + A FD++ + D+V+W
Sbjct: 158 GLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNT 217
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
MI GY Q+ Y ++A++LF + F PN T VL AS + + +GR H+ ++LG
Sbjct: 218 MITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLG 277
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------- 422
D V ALVDMY+K + I D F S+++++++N++I+G
Sbjct: 278 CSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYS 337
Query: 423 ---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ + PD+ T V + S+C+ V G+ +H +S K G L S+V VG +++NFY+KC
Sbjct: 338 QLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFG-LDSDVSVGNSIVNFYSKC 396
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G SA F+++ N+V W+ +I G+ G+G +L F M + +E ++++
Sbjct: 397 GFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVI 456
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
A S V +G + ++ ++ ++D+ ++ G +E+A + MP E +
Sbjct: 457 KAVSSWAAVEQG-RHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKN 514
Query: 600 VSLFGAFLHG 609
V + + + G
Sbjct: 515 VVSWNSMITG 524
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 225/478 (47%), Gaps = 33/478 (6%)
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
L+ NVV WTS I + + L F +M +E N IT + ++ACA+
Sbjct: 2 LETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLAT 61
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
LH ILK G + + L+ MY K I++AR +FD++ D VSW +MI GY+Q G
Sbjct: 62 SLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRG 121
Query: 327 YPDKALKLFTD-----KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
++A LF + W + T+A+VL A LG +G+ VH +++G + D
Sbjct: 122 LNEEACGLFCSMINSCENW-KLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSD 180
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV-------------- 426
V + V MY KC ++ A F+ KD++AWN++I+G N
Sbjct: 181 LFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMEL 240
Query: 427 ---SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
P+ T V+ A ++ VG HA K G S +V+V TAL++ Y+K D +
Sbjct: 241 EGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLG-CSMDVFVATALVDMYSKFYDIE 299
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
F M ++N V+++A+I GY + G +L ++S + +E ++P+ F + S+CS
Sbjct: 300 DVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCS 359
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
+ V EG + + F + +V+ ++ G + ALE E++ P+ +
Sbjct: 360 VSSTVAEGAQVHVHSVK-FGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVCW 417
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHP--DKACYYVLVSNLYASDGRWIRVNQVREL 659
+ G +++ GE + + ++ DK + S++ + W V Q R L
Sbjct: 418 AGIISG---FAQNGEGEKALMQFCKMRKFIDKTDEFS-SSSVIKAVSSWAAVEQGRHL 471
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM--VG 549
M E N V W++ I +G +L+ F ML ++PN + ++ +SAC+ + +
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 550 EGWKCFYSMCRDFK---FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C + + F FV S ++ + ++ R++EA ++MP DVS
Sbjct: 61 TSLHCLI-LKKGFSNQLFVSSG-----LISMYSKHDRIKEARFLFDDMPERDDVS 109
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 309/556 (55%), Gaps = 24/556 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQV 202
D+ +L++ + + + +++H + G ++++ T L YA C + ++ +
Sbjct: 21 DSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHI 80
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD+ + KN W SMI GY N+ L L+ +M + + T ++ AC L
Sbjct: 81 FDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLR 140
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +H ++ G+E + ++ ++L MY K G++ AR VFD + DL SW M+ G+
Sbjct: 141 EMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGF 200
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
++G A ++F D + F + T+ ++LSA + +L +G+ +H +R G
Sbjct: 201 VKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRV 260
Query: 383 ----VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-------------- 424
++N+++DMY C ++ AR +FE KDV++WNS+ISG +
Sbjct: 261 CNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRM 320
Query: 425 ---NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
PD VT++SV++AC + A+++G+++ +Y K+G + NV VGTAL+ YA CG
Sbjct: 321 VVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVV-NVVVGTALIGMYANCGS 379
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A VFD M EKN + M+ G+G+ G G ++++F +ML + V P+E IFT +LSA
Sbjct: 380 LVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSA 439
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH+G+V EG + FY M RD+ P HY C+VDLL RAG L+EA +ENM ++P+
Sbjct: 440 CSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNED 499
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ A L C L+ L + +K+ EL+PD YV +SN+YA++ RW V VR L+
Sbjct: 500 VWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVA 559
Query: 662 QRGLSKSPGCSLVDLD 677
+R L K P S V+L+
Sbjct: 560 KRRLRKPPSYSFVELN 575
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 171/585 (29%), Positives = 276/585 (47%), Gaps = 66/585 (11%)
Query: 29 QQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGL--TNDKCNTKL 86
+ T T + ++F SL L L KS HA + G N TKL
Sbjct: 5 KTTATLIPKPSSTSTFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKL 64
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
+ Y GH+ YA+ +FD + + + + MIR Y N+ + Y M ++ DN
Sbjct: 65 AACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDN 124
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F + VLKAC +L + G KVH +V VGG D +V ++ MY K D+ ++R VFD
Sbjct: 125 FTYPFVLKACGDLLLREMGRKVHALVV-VGGLEEDVYVGNSILSMYFKFGDVEAARVVFD 183
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALH 263
L +++ SW +M++G+V+N A+ +F M R+GFV G++ TL +L++AC + L
Sbjct: 184 RMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFV-GDRTTLLALLSACGDVMDLK 242
Query: 264 QGKWLHGYILKIGIE---INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
GK +HGY+++ G N L+ +++DMY C ++ AR +F+ L D+VSW ++I
Sbjct: 243 VGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLIS 302
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LE 379
GY + G +AL+LF P+ VT+ SVL+A Q+ L +G V S ++ G +
Sbjct: 303 GYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVV 362
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
+ V AL+ MYA C + A +F+ EK++ A +++G L
Sbjct: 363 NVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEML 422
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V+PD +V+SAC+ G V G + FY
Sbjct: 423 GKGVTPDEGIFTAVLSACSHSGLVDEGKEI----------------------FY------ 454
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+M D E +S ++ G G + A+ +M +++PNE ++T +LSAC
Sbjct: 455 ---KMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENM---KLKPNEDVWTALLSAC 508
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEE 586
V S + F+ P + YVC+ ++ A R E+
Sbjct: 509 RLHRNVKLA---VISAQKLFELNPDGVSGYVCLSNIYAAERRWED 550
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 212/696 (30%), Positives = 371/696 (53%), Gaps = 48/696 (6%)
Query: 17 PKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALL--IV 74
P L F+S + P + T++S L C T +LKA A+ ++
Sbjct: 86 PHEALLFYSRMKKTAPFTNCDAYTYSS-----------TLKACAETKNLKAGKAVHCHLI 134
Query: 75 DGLTNDK--CNTKLVSMYGSFGHVK------YARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
L N + L++MY S + R VFD+M + ++ +I WY
Sbjct: 135 RCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGR 194
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVL 183
+ + M + + F V A R I + + ++K+G D FV+
Sbjct: 195 NAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVV 254
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF-NRMREGFV 242
+ + MYA+ DI SSR+VFD +++N+ W +MI YVQNDC E + LF + +
Sbjct: 255 SSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEI 314
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+++T +A + L+ + G+ HG++ K E+ +V +L+ MY +CG++ +
Sbjct: 315 VSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFG 374
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VF + D+VSW MI + Q+G D+ L L + + F +++T+ ++LSA++ L N
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 363 LNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETT--SEKDVIAWNSIIS 420
+G+ H+ IR G++ + + L+DMY+K +I ++ +FE + +E+D WNS+IS
Sbjct: 435 KEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G L+ N+ P+AVT+ S++ AC+ +G+V +G LH +S +Q L
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ-YLD 553
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
NV+V +AL++ Y+K G + A +F +E+N+VT++ MI GYG G G +++LF M
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
++P+ + F +LSACS++G++ EG K F M + PS +HY C+ D+L R GR
Sbjct: 614 QESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGR 673
Query: 584 LEEALEFMENMPIEPDVS-LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK--ACYYVLV 640
+ EA EF++ + E +++ L+G+ L C L+ +L E + +++ + K + Y VL+
Sbjct: 674 VNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLL 733
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
SN+YA + +W V++VR M+++GL K G S +++
Sbjct: 734 SNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEI 769
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 165/639 (25%), Positives = 291/639 (45%), Gaps = 74/639 (11%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR--LKEHDNFVFSK 151
G+ + AR +FD++P P + +I + N+L + + FY M+K D + +S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 152 VLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSS------RQVFD 204
LKAC E +++ G VHC +++ + V L++MY C + R+VFD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
KNVV+W ++I+ YV+ E F M V+ + ++ ++ A + R++ +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 265 GKWLHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+G +LK+G E L V++ + MY + G+I +R VFD ++ W MI Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 323 TQSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Q+ ++++LF + + + + VT SA + L + +GR H + E
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDN---------- 425
++N+L+ MY++C + + +F + E+DV++WN++IS GLDD
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
D +T+ +++SA ++L ++G HA+ +QG+ + + L++ Y+K G +
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG--MNSYLIDMYSKSGLIR 470
Query: 484 SARMVFD--AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
++ +F+ E++ TW++MI GY G + +F ML + ++PN V +IL A
Sbjct: 471 ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPA 530
Query: 542 CSHTGMVGEGWKC---------------------FYSMCRDFKFVPSM---------KHY 571
CS G V G + YS K+ M Y
Sbjct: 531 CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590
Query: 572 VCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
M+ + G E A+ M+ I+PD F A L C D G + ++M E
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 629 LH---PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
++ P Y + L GR RVN+ E +K G
Sbjct: 651 VYNIQPSSEHYCCITDML----GRVGRVNEAYEFVKGLG 685
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 198/563 (35%), Positives = 306/563 (54%), Gaps = 30/563 (5%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFV-LTGLVDMYAKCRDIGSSRQVFD--ETLD 208
+L +L+ + ++H ++V S + L+ +YAKC I + +F+
Sbjct: 103 LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPS 162
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
NVV+WT++I +++ + L FNRMR + N T +++ ACA L +G+ +
Sbjct: 163 TNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQI 222
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H I K + + TALLDMY KCG++ A +VFDE+ +LVSW +MIVG+ ++
Sbjct: 223 HALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLY 282
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINAL 387
+A+ +F ++ P+ V+I+SVLSA A L L+ G+ VH ++ GL V N+L
Sbjct: 283 GRAIGVF--REVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSL 340
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDA 430
VDMY KC + DA +F ++DV+ WN +I G + + V PD
Sbjct: 341 VDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDE 400
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
+ S+ A AS+ A+ G+ +H++ K G + N + ++L+ Y KCG A VF
Sbjct: 401 ASYSSLFHASASIAALTQGTMIHSHVLKTGHVK-NSRISSSLVTMYGKCGSMLDAYQVFR 459
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
+E N V W+AMI + G ++ LF +MLNE V P + F ++LSACSHTG + +
Sbjct: 460 ETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDD 519
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G+K F SM P ++HY CMVDLL R GRLEEA F+E+MP EPD ++GA L C
Sbjct: 520 GFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALLGAC 579
Query: 611 GLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
G ++ ++G + +++ +L PD Y+L+SN+Y G ++VR LM G+ K G
Sbjct: 580 GKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESG 639
Query: 671 CSLVDLD------IANDFSFSRV 687
CS +D+ AND S SR
Sbjct: 640 CSWIDVKNRTFVFNANDRSHSRT 662
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 153/513 (29%), Positives = 238/513 (46%), Gaps = 56/513 (10%)
Query: 5 SLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGS 64
+ L +SR+ KP L FF+ +T + TF++ LP+ LL S G
Sbjct: 169 TTLINQLSRSNKPFQALTFFN--RMRTTGIYPNHFTFSAI--LPACAHAALL----SEG- 219
Query: 65 LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ HAL+ ND T L+ MY G + A +VFD MP+ + S+ MI +
Sbjct: 220 -QQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVK 278
Query: 124 NDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SF 181
N LY + + R+ L D S VL AC L ++D G +VH IVK G +
Sbjct: 279 NKLYGRAIGVF---REVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVY 335
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REG 240
V LVDMY KC + ++F D++VV+W MI G + ++ F M REG
Sbjct: 336 VKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREG 395
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
VE ++ + SL A A + AL QG +H ++LK G NS + ++L+ MY KCG++ DA
Sbjct: 396 -VEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDA 454
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
VF E ++V WTAMI + Q G ++A+KLF + P ++T SVLSA +
Sbjct: 455 YQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHT 514
Query: 361 GNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIA 414
G ++ G M + I+ GLE Y +VD+ + + +A R+I E D +
Sbjct: 515 GKIDDGFKYFNSMANVHNIKPGLEHYA---CMVDLLGRVGRLEEACRFIESMPFEPDSLV 571
Query: 415 WNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSS-------LHAYSTKQGLLSSNVY 467
W ++ + AC V++G L + +L SN+Y
Sbjct: 572 WGAL------------------LGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIY 613
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
+ +L + D M + +R+++ +W
Sbjct: 614 IRHGML----EEADEVRRLMGINGVRKESGCSW 642
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 212/477 (44%), Gaps = 60/477 (12%)
Query: 231 LVLFNRMREGFVEGNQIT----LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
L LF + G + +Q + L L+ AKL++L +H ++ + +
Sbjct: 78 LQLFTSYQSGVPKFHQFSSVPDLKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINT 137
Query: 287 LLDMYVKCGNIRDARSVFDEL--CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
LL +Y KCG+I +F+ S ++V+WT +I ++S P +AL F + +
Sbjct: 138 LLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIY 197
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSL-GIRLGLEDYTVINALVDMYAKCHVIADARYI 403
PNH T +++L A A L+ G+ +H+L L D V AL+DMYAKC + A +
Sbjct: 198 PNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENV 257
Query: 404 FETTSEKDVIAWNSIISGLDDN---------------VSPDAVTLVSVISACASLGAVQV 448
F+ +++++WNS+I G N + PD V++ SV+SACA L +
Sbjct: 258 FDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVELDF 317
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H K+GL+ VYV +L++ Y KCG + A +F +++ VTW+ MI G
Sbjct: 318 GKQVHGSIVKRGLVGL-VYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCF 376
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW---------------- 552
+ + F M+ E V+P+E ++++ A + + +G
Sbjct: 377 RCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSR 436
Query: 553 ----------KCFYSMCRDFKFVPSMKHY--VC---MVDLLARAGRLEEALEFMENMPIE 597
KC SM ++ K + VC M+ + + G EA++ E M E
Sbjct: 437 ISSSLVTMYGKC-GSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNE 495
Query: 598 ---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC--YYVLVSNLYASDGR 649
P+ F + L C + D G M +H K +Y + +L GR
Sbjct: 496 GVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGR 552
>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
Length = 711
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 209/639 (32%), Positives = 345/639 (53%), Gaps = 32/639 (5%)
Query: 65 LKAFHALLIVDGLTNDKC-NTKLVSMYGSF--GHVKYARSVFDSMPNPDFYSFQVMIRWY 121
++ HA L+V G +LV Y G + +A VFD MP + +++ +I+
Sbjct: 76 VRRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVIKGL 135
Query: 122 FLNDLYKDIVEFYKCM-RKRLKEHDNFVFSKVLKACCELRDIDEGMKVH----CEIVK-V 175
+ + + +Y M R D F + VLKAC L ++++G KV +I + +
Sbjct: 136 VDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVETDIARGI 195
Query: 176 GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
+ FV LVDM+AKC +G +R +F+ +++ SWT+MI G V+ E + L
Sbjct: 196 AKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLK 255
Query: 236 RMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
RM+ EGF + + +++ AC K++ L G LHGY +K G+ + + AL+DMY KC
Sbjct: 256 RMKSEGF-RPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKC 314
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+ A S+F + D+ SW+ +I G++Q+ + ++ LFT+ + PN TIAS+L
Sbjct: 315 ARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASIL 374
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVI 413
+ ++L L G+ +H +R LE + +AL+D Y + I DA+ +FE + D++
Sbjct: 375 PSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLV 434
Query: 414 AWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
NS+I G L + + PD VT+VSV+ C + G LHAY+
Sbjct: 435 VLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYA 494
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
+ + SS V AL + Y KCG + A +F M E+NTVT++ +I G G +
Sbjct: 495 IRHNI-SSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLGKHGHADQA 553
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY-SMCRDFKFVPSMKHYVCMV 575
LF M + V P++V F +LS CSH G++ +G CFY SM RD+ P +HY C+V
Sbjct: 554 FILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGL-CFYDSMLRDYNIPPDKEHYSCIV 612
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DL +R+G+L++A F+ N+ P++ + G L C + R D+ E++ +++ E +P+
Sbjct: 613 DLYSRSGKLDDAWSFIANLQEVPEIDVLGCLLSACRDHHRMDIAELVAERIFEQNPNDPG 672
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
Y++L+SN+YAS G W V ++R ++++R L K G SL+
Sbjct: 673 YHILLSNVYASAGMWSEVTRIRTMIEERSLKKRTGNSLI 711
>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 769
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 337/652 (51%), Gaps = 30/652 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKC------NTKLVSMYGSFGHVKYARSVFDSM 106
++L+ C S+ SL I D + N C N ++SMYG G ++ AR VFD M
Sbjct: 68 ISLICACSSSRSLA--QGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 125
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P + S+ +I Y N + + Y M + D F F ++KAC D+ G
Sbjct: 126 PERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGK 185
Query: 167 KVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H +++K+ + L+ MY + + + +VF K+++SW+S+IAG+ Q
Sbjct: 186 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLG 245
Query: 226 CAQEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E L M G N+ GS + AC+ L G +HG +K+ + N+
Sbjct: 246 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAG 305
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+L DMY +CG + AR VF+++ D SW +I G +GY D+A+ +F++ + + F
Sbjct: 306 CSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFI 365
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYI 403
P+ +++ S+L A + L G +HS I+ G L D +V N+L+ MY C + +
Sbjct: 366 PDAISLRSLLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNL 425
Query: 404 FETTSEK-DVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
FE K D ++WN+I++ L PD +T+ +++ C + +
Sbjct: 426 FEDFRNKADSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 485
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+++GS +H YS K GL+ ++ L++ YAKCG + AR +FD+M + V+WS +I
Sbjct: 486 LKLGSQVHCYSWKTGLVLEQ-FIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIV 544
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GY G G +L LF +M + ++PN V F +L+ACSH G+V EG K + M +
Sbjct: 545 GYAQSGFGEEALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGIS 604
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P+ +H C+VDLLARAG L EA F++ M +EPDV ++ L C DL + +
Sbjct: 605 PTKEHCSCVVDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAEN 664
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+L++ P + +VL+ +++AS G W +R MK+ + K PG S +D++
Sbjct: 665 ILKIDPFNSTAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVE 716
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 143/502 (28%), Positives = 247/502 (49%), Gaps = 42/502 (8%)
Query: 124 NDLYKDIVEFYKCMRK------RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG 177
N Y++ +E + +K RL+ + ++ AC R + +G K+H I+
Sbjct: 41 NSFYREALEAFDFAQKNSSFKIRLR-----TYISLICACSSSRSLAQGRKIHDHILNSNC 95
Query: 178 P-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D+ + ++ MY KC + +R+VFD ++N+VS+TS+I GY QN E + L+ +
Sbjct: 96 KYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLK 155
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKC 294
M + + +Q GS++ ACA + GK LH ++K +E +SHL+ AL+ MYV+
Sbjct: 156 MLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIK--LESSSHLIAQNALIAMYVRF 213
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASV 353
+ DA VF + + DL+SW+++I G++Q G+ +AL + + F PN S
Sbjct: 214 NQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 273
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDV 412
L A + L + G +H L I+L L + +L DMYA+C + AR +F D
Sbjct: 274 LKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDT 333
Query: 413 IAWNSIISGL------DDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAY 455
+WN II+GL D+ VS PDA++L S++ A A+ G +H++
Sbjct: 334 ASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSF 393
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGG 514
K G L +++ V +LL Y C D +F+ R K ++V+W+A++
Sbjct: 394 IIKCGFL-ADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQPV 452
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-- 572
L LF ML E +P+ + +L C + G + C +K ++ ++
Sbjct: 453 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH---CYSWKTGLVLEQFIKN 509
Query: 573 CMVDLLARAGRLEEALEFMENM 594
++D+ A+ G L +A ++M
Sbjct: 510 GLIDMYAKCGSLRQARRIFDSM 531
>gi|449522919|ref|XP_004168473.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like, partial [Cucumis sativus]
Length = 670
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 327/610 (53%), Gaps = 52/610 (8%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KLV+ Y S G ++ AR VFD +P P M+ Y N+ Y D +E K M + E
Sbjct: 94 KLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCHLEF 153
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
D++ + LKAC L D + GM E++ + V GL A R +GSS F
Sbjct: 154 DSYTCNFALKACMFLLDYEMGM----EVIGLA-----VCKGL----AGGRFLGSSILNFL 200
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E L + EG LF M +E + +T+ SL+ +C ++R L
Sbjct: 201 EGLFR-------------------EGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTF 241
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +HG++L G+ ++ ++T L+DMY K G++ AR +F+ + S +LVSW MI GY Q
Sbjct: 242 GKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQ 301
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G + L+LF D + T+ S++ ++ +L+ G+++H R GL+ + +
Sbjct: 302 NGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVL 361
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
A+VD+YAKC +A A +FE K+VI+W +++ GL N V
Sbjct: 362 PTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERV 421
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ +A+TLVS++ C LG ++ G S+HA T+ +S V V TAL++ YAKC SA
Sbjct: 422 TFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHF-ASEVVVMTALIDMYAKCSKINSAE 480
Query: 487 MVFD-AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
MVF + K+ + +++MI GYGM G G +L ++ M E +QPNE F ++LSACSH+
Sbjct: 481 MVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHS 540
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG F +M +D P+ K Y C+VDLL+RAGRL +A E + MP P +
Sbjct: 541 GLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQMPFTPTSGILET 600
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L+GC L+ +LG + ++L L Y+ +SN+YA RW V VR LM ++ +
Sbjct: 601 LLNGCLLHKDIELGVKLADRLLSLESRNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEI 660
Query: 666 SKSPGCSLVD 675
K PG S ++
Sbjct: 661 KKIPGYSSIE 670
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 165/323 (51%), Gaps = 9/323 (2%)
Query: 53 LNLLGLCKSTGSL------KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDS 105
+ ++ L +S G + K H ++ G++ D + T L+ MY G V+ AR +F++
Sbjct: 224 VTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFEN 283
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP+ + S+ VMI Y N L + + ++ + D+ +++ C D+D G
Sbjct: 284 MPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGG 343
Query: 166 MKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H I + G + VL T +VD+YAKC + + VF+ +KNV+SWT+M+ G QN
Sbjct: 344 KILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQN 403
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
A++ L LF++M+ V N +TL SLV C L L +G+ +H + + ++
Sbjct: 404 GHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVM 463
Query: 285 TALLDMYVKCGNIRDARSVFD-ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
TAL+DMY KC I A VF L D++ + +MI GY G KAL ++
Sbjct: 464 TALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGL 523
Query: 344 FPNHVTIASVLSASAQLGNLNMG 366
PN T S+LSA + G + G
Sbjct: 524 QPNESTFVSLLSACSHSGLVEEG 546
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 137/317 (43%), Gaps = 27/317 (8%)
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
LV L+ Y G + +AR VFDE+ V AM+ GY Q+ + ++L
Sbjct: 91 LVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCIELLKMMSRCH 150
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-----DYTVINALVDMYAKCHVI 397
+ T L A L + MG V L + GL +++N L ++ +
Sbjct: 151 LEFDSYTCNFALKACMFLLDYEMGMEVIGLAVCKGLAGGRFLGSSILNFLEGLFRE---- 206
Query: 398 ADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
+N + L + + P AVT++S+I +C + + G +H +
Sbjct: 207 ----------------GYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVL 250
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
G +S + V T L++ Y K GD +SAR +F+ M +N V+W+ MI GY G +L
Sbjct: 251 GFG-MSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETL 309
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
LF ++ ++V + +++ CS T + +G K + ++ +VDL
Sbjct: 310 RLFQKLIMDDVGFDSGTVVSLIQLCSRTADL-DGGKILHGFIYRRGLDLNLVLPTAIVDL 368
Query: 578 LARAGRLEEALEFMENM 594
A+ G L A E M
Sbjct: 369 YAKCGSLAYASSVFERM 385
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 200/569 (35%), Positives = 308/569 (54%), Gaps = 28/569 (4%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
++ M++ E +N F V KAC +L ++ VH +VK D FV T +VDMY
Sbjct: 41 LFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYV 100
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC +G + +F ++V SW SMI G+ Q + LF M + + +T+
Sbjct: 101 KCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIG 160
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L + L+ L + +H + +KIGI+ + + + Y KCG A +VFD ID
Sbjct: 161 LTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFD---GID 217
Query: 312 L-----VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
VSW +MI GY KA+ F F + TI S+LS+ Q L G
Sbjct: 218 KGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHG 277
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+++H+ GI++G + D VIN L+ MY+KC I ARY+F+ K ++W ++I+G
Sbjct: 278 KLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEK 337
Query: 422 --LDDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
LD+ ++ PD VT++S++S C GA+++G + Y+T GL N+ V
Sbjct: 338 GDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGL-KDNLMV 396
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
AL++ YAKCG +AR +F M EK+ V+W+ +I G + G+ +L LF M+ +
Sbjct: 397 CNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGL 456
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN + F +L AC+H G + +GW+CF M + +K P + HY CM DLL R GRL+EA
Sbjct: 457 KPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAF 516
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF++NMP +PDV ++ L C ++ +GE + + EL P A YV ++N+YAS G
Sbjct: 517 EFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAG 576
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+W RV +R +MK KSPG SLV ++
Sbjct: 577 KWDRVAAIRTMMKCNKAMKSPGKSLVQVN 605
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 223/441 (50%), Gaps = 25/441 (5%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
V W S I V A + L+LF +M++ +E N +T S+ AC+KL L + +H
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
+++K + + + T+++DMYVKC + A ++F + D+ SW +MI+G+ Q G+ D
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVD 137
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
+ + LF + + VT+ + ++ L +L M +HS GI++G++ D +V N +
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWI 197
Query: 389 DMYAKCHVIADARYIFETTSE--KDVIAWNSIISG-----------------LDDNVSPD 429
YAKC A +F+ + K ++WNS+I+G L D
Sbjct: 198 AAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRAD 257
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T++S++S+C + G +HA+ + G S++ V L++ Y+KCGD SAR +F
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVG-CDSDIQVINTLISMYSKCGDIGSARYLF 316
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M K V+W+AMI GY +GD ++ LFS M +P+ V +++S C TG +
Sbjct: 317 DNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALE 376
Query: 550 EG-WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
G W Y+ K ++ ++D+ A+ G ++ A E MP + VS + +
Sbjct: 377 LGKWIDTYATANGLK--DNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVS-WTTLIA 433
Query: 609 GCGLYSRFDLGEVMIKKMLEL 629
GC L F + +M+EL
Sbjct: 434 GCALNGEFKEALGLFFQMVEL 454
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 145/527 (27%), Positives = 237/527 (44%), Gaps = 61/527 (11%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T +V MY + +A ++F MP D S+ MI + +V + M
Sbjct: 92 QTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDRVVSLFCEMGIEGI 151
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D+ + + L+D+ +H +K+G D V + YAKC + G +
Sbjct: 152 RADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAET 211
Query: 202 VFDETLDKNV---VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
VFD +DK + VSW SMIAGY + + + F +M G + T+ SL+++C +
Sbjct: 212 VFD-GIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRADLSTILSLLSSCVQ 270
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L GK +H + +++G + + ++ L+ MY KCG+I AR +FD + VSWTAM
Sbjct: 271 PEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAM 330
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I GY + G D+A+ LF+ + P+ VTI S++S Q G L +G+ + + GL
Sbjct: 331 IAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGL 390
Query: 379 ED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
+D V NAL+D+YAKC + +AR +F T EK +++W ++I+G N
Sbjct: 391 KDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQ 450
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ P+ +T ++V+ AC G ++ G TK VY L+ Y+
Sbjct: 451 MVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTK-------VYKINPGLDHYSCMA 503
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
D + G G F + N +P+ I++ +LS
Sbjct: 504 D---------------------------LLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLS 536
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMK-HYVCMVDLLARAGRLEE 586
AC V G Y + F+ P YV M ++ A AG+ +
Sbjct: 537 ACKIHQNVVIGECVAYHL---FELEPQTAVPYVQMANIYASAGKWDR 580
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 5/239 (2%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA I G +D + L+SMY G + AR +FD+M S+ MI Y
Sbjct: 278 KLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEK 337
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VL 183
+ + + M ++ D ++ C + ++ G + G D+ V
Sbjct: 338 GDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVC 397
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+D+YAKC + ++R++F +K++VSWT++IAG N +E L LF +M E ++
Sbjct: 398 NALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLK 457
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL--VTALLDMYVKCGNIRDA 300
N IT +++ AC L +G + K+ +IN L + + D+ + G +++A
Sbjct: 458 PNHITFLAVLQACNHAGFLEKGWECFNLMTKV-YKINPGLDHYSCMADLLGRKGRLKEA 515
>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
Length = 766
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 207/620 (33%), Positives = 334/620 (53%), Gaps = 23/620 (3%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N + L++MYG G AR VFD M + + S+ +I + N D + + M
Sbjct: 81 NTILSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSML 140
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIG 197
+ D F + AC EL D+ G +VH + +K G D V LV MY+K +G
Sbjct: 141 RSGTMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVG 200
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTAC 256
+F+ DK+++SW S+IAG Q + L +F M EG N+ GS+ AC
Sbjct: 201 DGFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRAC 260
Query: 257 AKL-RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
+ + +L G+ +HG +K ++ NS+ +L DMY +C + AR VF + S DLVSW
Sbjct: 261 SVVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSW 320
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++I ++ G +A+ LF++ + + P+ +T+ ++L A L+ GR +HS ++
Sbjct: 321 NSLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVK 380
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDDNV-- 426
LGL D V N+L+ MYA+C + A +F T ++DV+ WNSI++ L+D
Sbjct: 381 LGLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKL 440
Query: 427 ---------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
S D ++L +V+SA A LG ++ +HAY+ K GL+ + + L++ YA
Sbjct: 441 FSLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKVGLVG-DAMLSNGLIDTYA 499
Query: 478 KCGDAQSARMVFDAMRE-KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
KCG A +F+ M ++ +WS++I GY G +L LF+ M N V+PN V F
Sbjct: 500 KCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFV 559
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L+ACS G+V EG + M ++ VP+ +H C++DLLARAGRL EA +F++ MP
Sbjct: 560 GVLTACSRVGLVDEGCYYYSIMKPEYGIVPTREHCSCVLDLLARAGRLSEAAKFVDQMPF 619
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
EPD+ ++ L ++ D+G+ + +L + P + YVL+ N+YAS G W ++
Sbjct: 620 EPDIIMWKTLLAASRTHNDVDMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARL 679
Query: 657 RELMKQRGLSKSPGCSLVDL 676
++ M+ G+ KSPG S + L
Sbjct: 680 KKDMRSSGVQKSPGKSWIKL 699
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/489 (28%), Positives = 231/489 (47%), Gaps = 35/489 (7%)
Query: 156 CCELRDIDEGMKVHCEIVKVGGPDSFVL------TGLVDMYAKCRDIGSSRQVFDETLDK 209
C LR + +G VH ++ D F+ L+ MY +C S+R VFD LD+
Sbjct: 52 CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
N VSW ++IA + QN + + LF+ M +Q LGS + AC++L L G+ +H
Sbjct: 112 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQVH 171
Query: 270 GYILKIGIEINSHLV--TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+K E S L+ AL+ MY K G++ D ++F+ + DL+SW ++I G Q G
Sbjct: 172 AQAIK--WESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGR 229
Query: 328 PDKALKLFTDK-KWADFFPNHVTIASVLSA-SAQLGNLNMGRMVHSLGIRLGLEDYTVIN 385
AL++F + PN SV A S + +L G +H + ++ L+ +
Sbjct: 230 EMDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRNSYAG 289
Query: 386 -ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVS 427
+L DMYA+C+ + AR +F D+++WNS+I+ D +
Sbjct: 290 CSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGLR 349
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD +T+++++ AC A+ G S+H+Y K G L +V V +LL+ YA+C D SA
Sbjct: 350 PDGITVMALLCACVGYDALHQGRSIHSYLVKLG-LGGDVIVSNSLLSMYARCLDFSSAMD 408
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF +++ VTW++++ LFS + + + +LSA + G
Sbjct: 409 VFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGY 468
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
E K ++ V ++D A+ G L++A + E M DV + + +
Sbjct: 469 F-EMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLI 527
Query: 608 HGCGLYSRF 616
G Y++F
Sbjct: 528 VG---YAQF 533
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 202/610 (33%), Positives = 326/610 (53%), Gaps = 20/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
LV++Y + AR +FD M D S+ +I Y N + + + + M K
Sbjct: 99 LVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVT 158
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVF 203
+ + F+ L+AC + I GM++H I+K G D +V LV MY + + + +F
Sbjct: 159 NTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIF 218
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
K++V+W SM+ G++QN E L F ++ ++ +Q+++ S++ A +L L
Sbjct: 219 GNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLL 278
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +H Y +K G + N + L+DMY KC + FD + DL+SWT GY
Sbjct: 279 NGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYA 338
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
Q+ +AL+L + + I S+L A L L + +H IR GL D +
Sbjct: 339 QNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVL 398
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GL------------DDNV 426
N ++D+Y +C +I A IFE+ KDV++W S+IS GL + +
Sbjct: 399 QNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGL 458
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD VTLVS++SA SL ++ G +H + ++G + + L++ YA+CG + A
Sbjct: 459 EPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGS-ISNTLVDMYARCGSVEDAY 517
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F + +N + W+AMI YGM G G ++ LF M +E++ P+ + F +L ACSH+G
Sbjct: 518 KIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSG 577
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG M +++ P +HY C+VDLL R LEEA + +++M EP ++ A
Sbjct: 578 LVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCAL 637
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++S ++GEV +K+LEL D YVLVSN++A++GRW V +VR MK GL+
Sbjct: 638 LGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLT 697
Query: 667 KSPGCSLVDL 676
K+PGCS +++
Sbjct: 698 KNPGCSWIEV 707
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 160/520 (30%), Positives = 265/520 (50%), Gaps = 25/520 (4%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MYG G V A +FD M +++ M+ Y N +E Y+ MR D++
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDET 206
F +LKAC + D+ G ++H +K G DS FV+ LV +YAKC DI +R++FD
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKY-GCDSFVFVVNSLVALYAKCNDINGARKLFDRM 119
Query: 207 LDKN-VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
+N VVSW S+I+ Y N E L LF+ M + V N T + + AC + G
Sbjct: 120 YVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLG 179
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+H ILK G ++ ++ AL+ MYV+ G + +A +F L D+V+W +M+ G+ Q+
Sbjct: 180 MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI- 384
G +AL+ F D + AD P+ V+I S++ AS +LG L G+ +H+ I+ G + ++
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
N L+DMYAKC ++ F+ + KD+I+W + +G N +
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
DA + S++ AC L + +H Y+ + GL S+ + +++ Y +CG A
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL--SDPVLQNTIIDVYGECGIIDYAVR 417
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F+++ K+ V+W++MI Y G +L +FS M ++P+ V +ILSA
Sbjct: 418 IFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLST 477
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ +G + + R F+ +VD+ AR G +E+A
Sbjct: 478 LKKGKEIHGFIIRK-GFILEGSISNTLVDMYARCGSVEDA 516
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 225/479 (46%), Gaps = 30/479 (6%)
Query: 189 MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT 248
MY KC + + +FD+ ++++ +W +M+ GYV N A L ++ MR V + T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL- 307
L+ AC + L G +HG +K G + +V +L+ +Y KC +I AR +FD +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
D+VSW ++I Y+ +G +AL LF++ A N T A+ L A + +G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 368 MVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN- 425
+H+ ++ G + D V NALV MY + + +A IF KD++ WNS+++G N
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 426 ----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
+ PD V+++S+I A LG + G +HAY+ K G SN+ VG
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNG-FDSNILVG 299
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
L++ YAKC FD M K+ ++W+ GY +L L + E +
Sbjct: 300 NTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
+ + +IL AC +G+ + R P +++ + +D+ G ++ A+
Sbjct: 360 VDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTI--IDVYGECGIIDYAVR 417
Query: 590 FMENMPIEPDV---SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
E++ + V S+ ++H ++ M + LE PD Y LVS L A
Sbjct: 418 IFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLE--PD---YVTLVSILSA 471
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 9/209 (4%)
Query: 63 GSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
G +K H I GL++ ++ +YG G + YA +F+S+ D S+ MI Y
Sbjct: 379 GKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYV 438
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV 182
N L +E + M++ E D +L A C L + +G ++H I++ G F+
Sbjct: 439 HNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKG----FI 494
Query: 183 LTG-----LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
L G LVDMYA+C + + ++F T ++N++ WT+MI+ Y + + + LF RM
Sbjct: 495 LEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRM 554
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGK 266
++ + + IT +L+ AC+ +++GK
Sbjct: 555 KDEKIIPDHITFLALLYACSHSGLVNEGK 583
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/603 (32%), Positives = 338/603 (56%), Gaps = 27/603 (4%)
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
R VFD+M + ++ +I WY + + M + + F V A
Sbjct: 172 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATS 231
Query: 160 RDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
R I + + ++K+G D FV++ + MYA+ D+ SSR+VFD +++N+ W +
Sbjct: 232 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNT 291
Query: 217 MIAGYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
MI YVQNDC E + LF + + +++T +A + L+ + G+ HG++ K
Sbjct: 292 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKN 351
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
E+ ++ +L+ MY +CG ++ + VF + D+VSW MI + Q+G D+ L L
Sbjct: 352 FRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLV 411
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCH 395
+ + F +++T+ ++LSA++ L N +G+ H IR G++ + + L+DMYAK
Sbjct: 412 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGMNSYLIDMYAKSG 471
Query: 396 VIADARYIFETT--SEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSV 436
+I ++ +FE + +E+D WNS+ISG L+ N+ P+AVT+ S+
Sbjct: 472 LIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASI 531
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ AC+ +G+V +G LH +S +Q L NV+V +AL++ Y+K G + A +F +E+N
Sbjct: 532 LPACSQVGSVDLGKQLHGFSIRQ-YLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERN 590
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
+VT++ MI GYG G G +++LF M ++P+ + F +LSACS++G+V EG K F
Sbjct: 591 SVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFE 650
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS-LFGAFLHGCGLYSR 615
M + PS +HY C+ D+L R GR+ EA EF++ + E +++ L+G+ L C L+
Sbjct: 651 DMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGE 710
Query: 616 FDLGEVMIKKMLELHPDK--ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
+L E + +++ +L K + Y VL+SN+YA + W V++VR+ M+++GL K G S
Sbjct: 711 LELAETVSERLAKLDKGKNFSGYEVLLSNMYAEEQNWKSVDRVRKGMREKGLKKEVGRSG 770
Query: 674 VDL 676
+++
Sbjct: 771 IEV 773
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/643 (25%), Positives = 293/643 (45%), Gaps = 78/643 (12%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR--LKEHDNFVFSK 151
G+ + AR +FD++P P + +I + N+L + + FY M+K + D + +S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSS 112
Query: 152 VLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSS----------R 200
LKAC E +++ G VHC +++ + V L++MY C + S R
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVR 172
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VFD KNVV+W ++I+ YV+ E F M ++ + ++ ++ A A R
Sbjct: 173 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSR 232
Query: 261 ALHQGKWLHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
++ + +G +LK+G E L V++ + MY + G++ +R VFD ++ W M
Sbjct: 233 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTM 292
Query: 319 IVGYTQSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
I Y Q+ ++++LF + + + + VT SA + L + +GR H +
Sbjct: 293 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNF 352
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDN------ 425
E +IN+L+ MY++C + + +F + E+DV++WN++IS GLDD
Sbjct: 353 RELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 412
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
D +T+ +++SA ++L ++G H + +QG+ + + L++ YAK
Sbjct: 413 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEG--MNSYLIDMYAKS 470
Query: 480 GDAQSARMVFD--AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
G + ++ +F+ E++ TW++MI GY G + +F ML + ++PN V +
Sbjct: 471 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVAS 530
Query: 538 ILSACSHTGMVGEGWKC---------------------FYSMCRDFKFVPSM-------- 568
IL ACS G V G + YS K+ +M
Sbjct: 531 ILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERN 590
Query: 569 -KHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
Y M+ + G E A+ M+ + I+PD F A L C D G + +
Sbjct: 591 SVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFE 650
Query: 625 KMLELH---PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
M E++ P Y + L GR RVN+ E +K G
Sbjct: 651 DMREVYNIQPSSEHYCCITDML----GRVGRVNEAYEFVKGLG 689
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 201/385 (52%), Gaps = 23/385 (5%)
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND-LYKDIVEFYKCMRKRLKEHD 145
+SMY G ++ +R VFDS + + MI Y ND L + I F + + + D
Sbjct: 262 ISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSD 321
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV-LTGLVDMYAKCRDIGSSRQVFD 204
F A L+ ++ G + H + K V + L+ MY++C + S VF
Sbjct: 322 EVTFLLAASAVSGLQQVELGRQFHGFVSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFH 381
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+++VVSW +MI+ +VQN EGL+L M++ + + IT+ +L++A + LR
Sbjct: 382 SMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEI 441
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD--ELCSIDLVSWTAMIVGY 322
GK HG++++ GI+ + + L+DMY K G IR ++ +F+ D +W +MI GY
Sbjct: 442 GKQTHGFLIRQGIQFEG-MNSYLIDMYAKSGLIRISQKLFEGSGYAERDQATWNSMISGY 500
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDY 381
TQ+G+ ++ +F + PN VT+AS+L A +Q+G++++G+ +H IR L ++
Sbjct: 501 TQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNV 560
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
V +ALVDMY+K I A +F T E++ + + ++I G +
Sbjct: 561 FVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQEL 620
Query: 426 -VSPDAVTLVSVISACASLGAVQVG 449
+ PDA+ V+V+SAC+ G V G
Sbjct: 621 GIKPDAIAFVAVLSACSYSGLVDEG 645
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Query: 38 DQTFASFHSL-------PSIPCLNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKL 86
++TF F + ++ ++L C GS+ K H I L N + L
Sbjct: 507 EETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLHGFSIRQYLDQNVFVASAL 566
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
V MY G +KYA ++F + ++ MI Y + + + + + M++ + D
Sbjct: 567 VDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQELGIKPDA 626
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKV 175
F VL AC +DEG+K+ ++ +V
Sbjct: 627 IAFVAVLSACSYSGLVDEGLKIFEDMREV 655
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 323/618 (52%), Gaps = 50/618 (8%)
Query: 80 DKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
D+C+ ++ Y + G + AR +F P ++ +I Y + +E + M+
Sbjct: 71 DECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQ 130
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+ + F + VL+ C +++G ++H +K ++FV+TGLVDMYAKC+ I
Sbjct: 131 YEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCIL 190
Query: 198 SSRQVFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ +F+ DK N V WT+M+ GY QN + + F MR +E NQ T S++TAC
Sbjct: 191 EAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTAC 250
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ A G +HG I++ G N + +AL+DMY KCG++ +AR + + + D VSW
Sbjct: 251 GSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWN 310
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+MIVG + G ++AL LF + T SVL+ + + ++ VHSL ++
Sbjct: 311 SMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKT 370
Query: 377 GLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
G E Y ++N ALVDMYAK A +FE ++KDVI+W S+++G N
Sbjct: 371 GFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLF 430
Query: 426 -------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ PD + + +V+SACA L ++ G +HA K GL SS + V +L++ YAK
Sbjct: 431 CEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSS-LSVDNSLVSMYAK 489
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG + A VFD+M ++ +TW+A+I GY G G
Sbjct: 490 CGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGR------------------------ 525
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
H G+V G F SM + P +HY CM+DLL R+G+L EA E + M ++P
Sbjct: 526 ----DHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQP 581
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
D +++ A L C ++ +LGE + EL P A YVL+SNLY++ G+W + R
Sbjct: 582 DATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRR 641
Query: 659 LMKQRGLSKSPGCSLVDL 676
LMK RG+SK PGCS +++
Sbjct: 642 LMKLRGVSKEPGCSWIEM 659
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 183/404 (45%), Gaps = 77/404 (19%)
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK------WADFF-- 344
KCG + DAR +FD + D SW MI Y SG ++A KLF + W+
Sbjct: 53 KCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISG 112
Query: 345 -----------------------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
PN T SVL + L G+ +H+ I+ +
Sbjct: 113 YCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSN 172
Query: 382 T-VINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISGLDDN-------------- 425
V+ LVDMYAKC I +A Y+FE +K + + W ++++G N
Sbjct: 173 AFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMR 232
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ + T S+++AC S+ A G+ +H + G +NV+VG+AL++ Y+KCGD
Sbjct: 233 GEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSG-FGANVFVGSALVDMYSKCGDL 291
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+AR + + M + V+W++MI G QG G +L+LF M ++ +E + ++L+
Sbjct: 292 SNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCF 351
Query: 543 S-----------HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
S H+ +V G++ +K V + +VD+ A+ G + A +
Sbjct: 352 SFVMDMRNAMSVHSLIVKTGFEA-------YKLVNN-----ALVDMYAKRGYFDYAFDVF 399
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM--LELHPDK 633
E M + DV + + + GC ++ + +M + +HPD+
Sbjct: 400 EKM-TDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQ 442
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 78/201 (38%), Gaps = 33/201 (16%)
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C L ++ + + G + S+ L N +KCG AR +FD M +++ +
Sbjct: 16 CHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNL-SKCGRVDDARKLFDVMPDRDECS 74
Query: 500 WSAMIGGYGMQGDGG-------------------------------GSLALFSDMLNEEV 528
W+ MIG Y G +L LF +M E
Sbjct: 75 WNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGE 134
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN+ + ++L CS ++ +G K ++ +F + +VD+ A+ + EA
Sbjct: 135 RPNQFTWGSVLRVCSMYVLLEKG-KQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAE 193
Query: 589 EFMENMPIEPDVSLFGAFLHG 609
E P + + L+ A + G
Sbjct: 194 YLFELAPDKRNHVLWTAMVTG 214
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 195/554 (35%), Positives = 319/554 (57%), Gaps = 26/554 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D F F +++A ++H +++G P F LV Y + I + +V
Sbjct: 69 DGFTFPSLIRAA---PSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKV 125
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FDE +++V +W +M++G +N A E + LF RM V G+ +T+ S++ C L
Sbjct: 126 FDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQ 185
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+H Y +K G++ + AL+D+Y K G + +A+ VF + DLV+W ++I G
Sbjct: 186 VLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGC 245
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG--LED 380
Q G ALK+F + + P+ +T+ S+ SA AQ G+ + +H +R G ++D
Sbjct: 246 EQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDD 305
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-LDDNVSPDAV-------- 431
NA+VDMYAK I A+ +F++ +D ++WN++I+G + + ++ +AV
Sbjct: 306 IIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQK 365
Query: 432 ---------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
T VSV+ A + LGA+Q G +HA S K GL + +VYVGT L++ YAKCG
Sbjct: 366 HEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGL-NVDVYVGTCLIDLYAKCGKL 424
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A ++F+ M ++T W+A+I G G+ G G +L LFS M E ++P+ V F ++L+AC
Sbjct: 425 AEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAAC 484
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH G+V +G F M + VP KHY CM D+L RAG+L+EA F++NMPI+PD ++
Sbjct: 485 SHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAV 544
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L C ++ ++G+V + + EL P+ YYVL+SN+YA G+W V++VR L+++
Sbjct: 545 WGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRR 604
Query: 663 RGLSKSPGCSLVDL 676
+ L K+PG S +++
Sbjct: 605 QNLQKTPGWSSIEV 618
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 240/554 (43%), Gaps = 61/554 (11%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLTNDKCNTK--LVSMYGSFGHVKYARSVFDSMPNPDF 111
+L+ S S HA + GL T LV Y FG + A VFD M D
Sbjct: 75 SLIRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDV 134
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
++ M+ N + V + M D S VL C L D + +H
Sbjct: 135 PAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVY 194
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
VK G + FV L+D+Y K + ++ VF +++V+W S+I+G Q
Sbjct: 195 AVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAA 254
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLD 289
L +F MR V + +TL SL +A A+ K LH Y+++ G +++ + A++D
Sbjct: 255 LKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVD 314
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHV 348
MY K NI A+ +FD + D VSW +I GY Q+G ++A++ + +K
Sbjct: 315 MYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQG 374
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
T SVL A + LG L G +H+L I++GL D V L+D+YAKC +A+A +FE
Sbjct: 375 TFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKM 434
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
+ WN+IISGL + + PD VT VS+++AC+ G V G
Sbjct: 435 PRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGR 494
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
S + Q Y + YA D M
Sbjct: 495 SF--FDVMQ-----VTYDIVPIAKHYACMAD---------------------------ML 520
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP-SMK 569
G G F+ + N ++P+ ++ +L AC G V G ++ F+ P ++
Sbjct: 521 GRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNL---FELDPENVG 577
Query: 570 HYVCMVDLLARAGR 583
+YV M ++ A+ G+
Sbjct: 578 YYVLMSNMYAKVGK 591
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 231/767 (30%), Positives = 376/767 (49%), Gaps = 110/767 (14%)
Query: 10 HVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSI---------PCLNLLGLCK 60
H SR P +RFF ++P + F+S+ + P+ C + LC
Sbjct: 4 HTSRHLFP---IRFFFNFQSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCP 60
Query: 61 STGSLKAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
K HA +I+ T L+ MY + +A VFD MP D S+ M+
Sbjct: 61 G----KQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLF 116
Query: 120 WY-------FLNDLYK-------DIVEFYKCMRKRLKE-HDNFVFSKVLKACCELRDIDE 164
Y L+ +VE + R+ D F+ VLK+C L D
Sbjct: 117 GYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGG 176
Query: 165 GMKVHCEIVKVGGPDSFVLTG--LVDMYAKC----------------------------- 193
G+++H VK+ G D V+TG L+DMYAKC
Sbjct: 177 GIQIHGLAVKM-GFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHG 235
Query: 194 ----RDIGS---------------------SRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
D G+ S Q+F+ + N+ S+ ++I GY ++D
Sbjct: 236 HALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGI 295
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E L +F +++ + ++++L ACA ++ +G +HG +K + N + A+L
Sbjct: 296 EALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAIL 355
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KCG + +A VF+E+ S D VSW A+I + Q+G +K L LF + P+
Sbjct: 356 DMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEF 415
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGI--RLGLEDYTVINALVDMYAKCHVIADARYIFET 406
T SVL A A LN G +H+ I R+GL+ + I AL+DMY+KC ++ A + +
Sbjct: 416 TYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGI-ALIDMYSKCGMMEKAEKLHDR 474
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
+E+ V++WN+IISG L+ V PD T +++ CA+L V++G
Sbjct: 475 LAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELG 534
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA K+ L S+ Y+ + L++ Y+KCG+ Q +++F+ ++ VTW+AM+ GY
Sbjct: 535 KQIHAQIIKKEL-QSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQ 593
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L +F M E V+PN F +L AC H G+V +G F+SM ++ P ++
Sbjct: 594 HGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLE 653
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY C+VD++ R+G++ +ALE +E MP E D ++ L C ++ ++ E +L+L
Sbjct: 654 HYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQL 713
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P+ + YVL+SN+YA+ G W V ++R++M+ GL K PGCS +++
Sbjct: 714 EPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEI 760
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 204/595 (34%), Positives = 324/595 (54%), Gaps = 62/595 (10%)
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYA--KCRD 195
K L++H + +L+ C ++I+ ++H I+K G ++ FV + L+ A D
Sbjct: 24 KILEQHP---YLNLLEKC---KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGD 77
Query: 196 IGSSRQVFDETLDK---NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
+ + +F+E NV W S+I GY + L LF+RM V+ N T L
Sbjct: 78 LSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFL 137
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN---------------- 296
+C K +A H+GK LH + LK+ + N H+ T+++ MY G
Sbjct: 138 FKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDA 197
Query: 297 ---------------IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ DAR +FDE+ D+VSW AMI GY QSG ++A+ F + + A
Sbjct: 198 VSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEA 257
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADA 400
+ PN T+ VLSA + +G+ + S G + + NAL+DMY KC A
Sbjct: 258 NVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIA 317
Query: 401 RYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASL 443
R +F+ EKDVI+WN++I G L NV P+ VT + ++ ACA L
Sbjct: 318 RELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACL 377
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
GA+ +G +HAY K SSN + T+L++ YAKCG ++A VF +M +N +W+AM
Sbjct: 378 GALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAM 437
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEV-QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
+ G+ M G +LALFS+M+N+ + +P+++ F +LSAC+ G+V G + F SM +D+
Sbjct: 438 LSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDY 497
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P ++HY CM+DLLARA + EEA M+NM +EPD +++G+ L C + R + GE +
Sbjct: 498 GISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYV 557
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+++ +L P+ A +VL+SN+YA GRW V ++R + +G+ K PGC+ +++D
Sbjct: 558 AERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEID 612
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 179/720 (24%), Positives = 311/720 (43%), Gaps = 134/720 (18%)
Query: 27 TNQQTPT-QHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNT 84
T+ +P+ H L + + L P LNLL CK+ + K H+L+I GL N +
Sbjct: 5 TSSPSPSILHFLPASDPPYKILEQHPYLNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQS 64
Query: 85 KLVSM--YGSFGHVKYARSVFDSMPN---PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
KL+ G + YA S+F+ + + + +IR Y L+ + + M
Sbjct: 65 KLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLY 124
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC----- 193
+ ++ F + K+C + + EG ++H +K+ + V T ++ MYA
Sbjct: 125 YGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDF 184
Query: 194 ----------RD----------------IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
RD + +R++FDE K+VVSW +MI+GYVQ+
Sbjct: 185 ARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRF 244
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+E +V F M+E V N+ T+ +++AC R+ GKW+ ++ G N L AL
Sbjct: 245 EEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNAL 304
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY KCG AR +FD + D++SW MI GY+ ++AL LF ++ PN
Sbjct: 305 IDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPND 364
Query: 348 VTIASVLSASAQLGNLNMGRMVHSL---GIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
VT +L A A LG L++G+ VH+ +R + ++ +L+DMYAKC I A +F
Sbjct: 365 VTFLGILHACACLGALDLGKWVHAYIDKNLR-NSSNASLWTSLIDMYAKCGCIEAAERVF 423
Query: 405 ETTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAV 446
+ +++ +WN+++SG + PD +T V V+SAC G V
Sbjct: 424 RSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLV 483
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+G + +S + +++ A+ + A ++
Sbjct: 484 DLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEIL------------------ 525
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
M N E++P+ I+ ++LSAC G V G Y R F+ P
Sbjct: 526 ----------------MKNMEMEPDGAIWGSLLSACKAHGRVEFGE---YVAERLFQLEP 566
Query: 567 -SMKHYVCMVDLLARAGRLEEALEF--------MENMPIEPDVSLFGAFLHGCGLYSRFD 617
+ +V + ++ A AGR ++ M+ +P + + G D
Sbjct: 567 ENAGAFVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDG------------D 614
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ E ++ + HP+ +N+Y +N+V +L+++ G + L D+D
Sbjct: 615 VHEFLVGD--KFHPE-------CNNIYK------MLNEVDKLLEENGFVPNTSEVLYDMD 659
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 330/638 (51%), Gaps = 31/638 (4%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K+ H + + GL D ++++YG G + A +FD MP + S+ +IR + N
Sbjct: 230 KSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSEN 289
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFV-----FSKVLKACCELRDIDEGMKVHCEIVKVG-GP 178
+ +E Y+ R L+ D + +L C ++D GM +H VK+G
Sbjct: 290 GFW---LEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVH 346
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM- 237
+ V L+DMY+KC + + +F + +K+VVSW SMI Y + E L +M
Sbjct: 347 ELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMW 406
Query: 238 -REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
E +E N++T+ +L+ AC + L + LHGY L+ + + A + Y KCG+
Sbjct: 407 MEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGS 466
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ A VF + + + SW A+I G+ Q+G P KAL + + P+ +I S+L A
Sbjct: 467 LVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLA 526
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+LG L G+ +H +R GLE + V +L+ +Y C R FE +K+ + W
Sbjct: 527 CGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCW 586
Query: 416 NSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
N+++SG L D + PD + + S++ AC+ L A+ +G +H ++ K
Sbjct: 587 NAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALK 646
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
L+ N +V +L++ YAK G ++ +F+ + K +W+ MI G+G+ G G ++
Sbjct: 647 NSLMEDN-FVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVE 705
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF DM + QP+ F +L AC H G+V EG M +K P ++HY C++D+L
Sbjct: 706 LFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDML 765
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
RAGRL EAL F+ MP EPD ++ + L Y ++GE +K+L L +KA Y+
Sbjct: 766 GRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYI 825
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L+SNLYA+ G+W V VR+ MK L K GCS ++L
Sbjct: 826 LLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIEL 863
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 148/495 (29%), Positives = 252/495 (50%), Gaps = 29/495 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRL 141
NT+L++MY G+ +R VFD + N + + + ++ Y N+LY + + F + +
Sbjct: 146 NTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTE 205
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
+ DNF F ++KAC DI G VH VK+G D FV ++ +Y KC + +
Sbjct: 206 FQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAV 265
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE---GFVEGNQITLGSLVTACA 257
++FD+ ++N++SW S+I G+ +N E F + E G + + T+ +L+ C+
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIP-DVATMVTLLPVCS 324
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
+ G +HG +K+G+ + AL+DMY KCG + +A +F ++ + +VSW +
Sbjct: 325 GEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNS 384
Query: 318 MIVGYTQSGYPDKALKLFTDKKWAD---FFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
MI Y++ G+ + L K W + N VTI ++L A + L R +H +
Sbjct: 385 MIGAYSREGFVFETFDLLR-KMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSL 443
Query: 375 RLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------- 425
R + +I NA + YAKC + A ++F + K V +WN++I G N
Sbjct: 444 RHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALD 503
Query: 426 ---------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ PD ++VS++ AC LG +Q G +H + + G L N +V +LL+ Y
Sbjct: 504 FYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNG-LEMNSFVAVSLLSLY 562
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
C R F+ M +KN+V W+AM+ GY +L+LF ML++ ++P+E+
Sbjct: 563 FHCSKPFYGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIA 622
Query: 537 TILSACSHTGMVGEG 551
+IL ACS +G G
Sbjct: 623 SILGACSQLSALGLG 637
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 224/426 (52%), Gaps = 28/426 (6%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDS--FVL-TGLVDMYAKCRDIGSSRQVFDETLD 208
+L+ C + ++++ G K+ E++ V S FVL T L+ MY+ C SR VFD L+
Sbjct: 113 LLQKCGQYKNVEIGRKLD-EMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
KN+ W ++++GYV+N+ E + F + + + T L+ AC +H GK
Sbjct: 172 KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS 231
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG +K+G+ ++ + A++ +Y KCG + +A +FD++ +L+SW ++I G++++G+
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291
Query: 328 PDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVI 384
+A + F + P+ T+ ++L + GN+++G ++H + ++LGL + V
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVC 351
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------------DDN 425
NAL+DMY+KC +++A +F K V++WNS+I ++
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ + VT+++++ AC + +LH YS + + + A + YAKCG A
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKEL-INNAFIAAYAKCGSLVFA 470
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF M K+ +W+A+IGG+ GD +L + +M + P++ ++L AC
Sbjct: 471 EHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRL 530
Query: 546 GMVGEG 551
G++ G
Sbjct: 531 GLLQYG 536
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 212/641 (33%), Positives = 347/641 (54%), Gaps = 25/641 (3%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFL 123
K H ++ + L D T L+ MY FG A VF + + + + VMI +
Sbjct: 689 KQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGG 748
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+++ + +E Y + + + F+ L AC + + G ++HC++VK+G D +V
Sbjct: 749 SEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYV 808
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+ MY+KC +G + VF +DK + W +M+A YV+ND L LF MR+ V
Sbjct: 809 STSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSV 868
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ TL ++++ C+ GK +H + K I+ + +ALL +Y KCG DA
Sbjct: 869 LPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYL 928
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD--FFPNHVTIASVLSASAQL 360
VF + D+V+W ++I G ++G +ALK+F D K D P+ + SV++A A L
Sbjct: 929 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGL 988
Query: 361 GNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
L+ G VH I+ G + + V ++L+D+Y+KC + A +F + ++++AWNS+I
Sbjct: 989 EALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMI 1048
Query: 420 SGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
S N + PD+V++ SV+ A +S ++ G SLH Y+ + G+
Sbjct: 1049 SCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI- 1107
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S+ ++ AL++ Y KCG ++ A +F M+ K+ +TW+ MI GYG GD +L+LF +
Sbjct: 1108 PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDE 1167
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
+ P++V F +++SAC+H+G V EG F M +D+ P M+HY MVDLL RAG
Sbjct: 1168 LKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAG 1227
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
RLEEA F++ MP E D S++ L + +LG + +K+L + P++ YV + N
Sbjct: 1228 RLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLIN 1287
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL-DIANDF 682
LY G ++ MK+RGL K PGCS +++ DI+N F
Sbjct: 1288 LYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVSDISNVF 1328
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 269/531 (50%), Gaps = 34/531 (6%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+LL C S +L K H +IV G D T LV+MY G + YA VFD
Sbjct: 566 SLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQS 625
Query: 110 DFYSFQV-----MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI-- 162
+ V MI YF +K+ V ++ M D F S V+ C+ +
Sbjct: 626 GVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRR 685
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-NVVSWTSMIAG 220
++G ++H +++ DSF+ T L+DMY K + +VF E DK NVV W MI G
Sbjct: 686 EDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVG 745
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
+ ++ + L L+ + V+ + + AC++ G+ +H ++K+G++ +
Sbjct: 746 FGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDND 805
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
++ T+LL MY KCG + +A +VF + L W AM+ Y ++ AL+LF +
Sbjct: 806 PYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQ 865
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIAD 399
P+ T+++V+S + G + G+ VH+ + ++ I +AL+ +Y+KC D
Sbjct: 866 KSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTD 925
Query: 400 ARYIFETTSEKDVIAWNSIISGL-------------------DDNVSPDAVTLVSVISAC 440
A +F++ EKD++AW S+ISGL DD++ PD+ + SVI+AC
Sbjct: 926 AYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINAC 985
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
A L A+ G +H K G + NV+VG++L++ Y+KCG + A VF +MR +N V W
Sbjct: 986 AGLEALSFGLQVHGSMIKTGQV-LNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAW 1044
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
++MI Y S+ LF+ ML++ + P+ V T++L A S T + +G
Sbjct: 1045 NSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 1095
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/511 (30%), Positives = 255/511 (49%), Gaps = 43/511 (8%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD- 204
F F +LKAC L ++ G +H I+ +G D F+ T LV+MY KC + + QVFD
Sbjct: 562 FTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 621
Query: 205 ----ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++V SMI GY + +EG+ F RM V + +L +V+ K
Sbjct: 622 WSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEG 681
Query: 261 ALHQ--GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTA 317
+ GK +HGY+L+ ++ +S L TAL+DMY K G DA VF E+ ++V W
Sbjct: 682 NFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNV 741
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
MIVG+ S + +L+L+ K + L A +Q N GR +H +++G
Sbjct: 742 MIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMG 801
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------- 425
L+ D V +L+ MY+KC ++ +A +F +K + WN++++ +N
Sbjct: 802 LDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFG 861
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
V PD+ TL +VIS C+ G G S+HA K+ + S+ + +ALL Y+KC
Sbjct: 862 FMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPA-IESALLTLYSKC 920
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE--VQPNEVIFTT 537
G A +VF +M EK+ V W ++I G G +L +F DM +++ ++P+ I T+
Sbjct: 921 GCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 980
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFK----FVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
+++AC+ + G + SM + + FV S ++DL ++ G E AL+ +
Sbjct: 981 VINACAGLEALSFGLQVHGSMIKTGQVLNVFVGS-----SLIDLYSKCGLPEMALKVFTS 1035
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
M E V A+ YSR +L E+ I+
Sbjct: 1036 MRPENIV----AWNSMISCYSRNNLPELSIE 1062
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 216/678 (31%), Positives = 359/678 (52%), Gaps = 32/678 (4%)
Query: 34 QHELDQTFASFHSLPS-IPCLNLLGLCKSTGSLKAF------HALLIVDGLTNDK-CNTK 85
H++ QT+ S + + L K+ +L F H ++V+GL++D +
Sbjct: 30 HHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVVNGLSHDSYIGSS 89
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S Y FG + R VFD+M + + +I Y +K MR+ +
Sbjct: 90 LISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSMFKQMRESGIQPT 149
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
+ +L +L + +HC I+ G L+ +V+MY KC I +R++F
Sbjct: 150 SVTLLSLLPGISKL---PLLLCLHCLIILHGFESDLALSNSMVNMYGKCGRIADARRLFQ 206
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+++VSW S+++ Y + +E L L M+ ++ ++ T S ++A A L
Sbjct: 207 SIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRL 266
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +HG +LK G+ I+ H+ +AL+ +Y++C + A VF D+V WTAMI G Q
Sbjct: 267 GKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQ 326
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+ DKAL +F ++ P+ T+AS L+A AQLG ++G +H +R G+ D
Sbjct: 327 NDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPA 386
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
N+LV MYAKC+ + + IF EKD+++WN+I++G N +
Sbjct: 387 QNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFL 446
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD++T+ S++ AC S GA+ G +H + + L+ + TAL++ Y KCG+ ++A+
Sbjct: 447 RPDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPC-IMTETALVDMYFKCGNLENAQ 505
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
FD M +++ V WS +I GYG G G +L +S+ L ++PN VIF ++LSACSH G
Sbjct: 506 KCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGG 565
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
++ +G + SM +DF+ P+++H C+VDLL+RAG+++EA F + M EP + + G
Sbjct: 566 LISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGML 625
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C + R +LG+V+ + M EL P +V ++N YAS RW V + M+ GL
Sbjct: 626 LDACRVNGRVELGKVIARDMFELKPVDPGNFVQLANSYASMSRWDGVEKAWTQMRSLGLK 685
Query: 667 KSPGCSLVDLDIANDFSF 684
K PG S +++ F+F
Sbjct: 686 KYPGWSSIEVH-GTTFTF 702
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 278/536 (51%), Gaps = 28/536 (5%)
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
SF ++ + +++ Y M+K + D + F + KAC L G+ +H +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
V G DS++ + L+ YAK I R+VFD L +NVV WT++I Y +
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
+F +MRE ++ +TL SL+ +KL L LH I+ G E + L ++++MY
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPGISKLPLLLC---LHCLIILHGFESDLALSNSMVNMY 192
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
KCG I DAR +F + D+VSW +++ Y++ G ++ L+L K D P+ T
Sbjct: 193 GKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
S LSASA G+L +G++VH L ++ GL D V +ALV +Y +C + A +F++T+EK
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEK 312
Query: 411 DVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
DV+ W ++ISGL + NV P TL S ++ACA LG +G+S+H
Sbjct: 313 DVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIH 372
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
Y +QG++ ++ +L+ YAKC Q + +F+ M EK+ V+W+A++ G+ G
Sbjct: 373 GYVLRQGIM-LDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+ F++M ++P+ + T++L AC G + +G K ++ +P +
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQG-KWIHNFVLRSSLIPCIMTETA 490
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
+VD+ + G LE A + + M ++ D+ + + G G + GE+ ++K E
Sbjct: 491 LVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGK---GEIALRKYSEF 542
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 210/465 (45%), Gaps = 34/465 (7%)
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
S+ S+++ + L + M++ + + T SL AC L G LH +
Sbjct: 16 SFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSV 75
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
+ G+ +S++ ++L+ Y K G I R VFD + ++V WT +I Y++ G D A
Sbjct: 76 VVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAF 135
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMY 391
+F + + P VT+ S+L + L + +H L I G E D + N++V+MY
Sbjct: 136 SMFKQMRESGIQPTSVTLLSLLPG---ISKLPLLLCLHCLIILHGFESDLALSNSMVNMY 192
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLV 434
KC IADAR +F++ +D+++WNS++S +++ PD T
Sbjct: 193 GKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFC 252
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
S +SA A G +++G +H K G L+ + +V +AL+ Y +C A VF + E
Sbjct: 253 SALSASAIKGDLRLGKLVHGLMLKDG-LNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
K+ V W+AMI G +L +F M+ V+P+ + L+AC+ G G
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371
Query: 555 FYSMCRDFKF--VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ R +P+ V M A+ +L+++ M +E D+ + A + G
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTM---YAKCNKLQQSCSIFNKM-VEKDLVSWNAIVAGHAK 427
Query: 613 YSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYAS----DGRWI 651
G +M + L PD L+ ++ G+WI
Sbjct: 428 NGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWI 472
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 207/622 (33%), Positives = 357/622 (57%), Gaps = 21/622 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ L+ MY S G A +F + + + ++ VMI + N L+++ +E Y +
Sbjct: 193 SGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENV 252
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ + F+ L ACC+ + GM+VHC++VK+G D +V T L+ MY+KC+ + +
Sbjct: 253 KLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAEN 312
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFD+ K W +MI+ YV N + +GL ++ +M+ + + +T +++++C + +
Sbjct: 313 VFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGS 372
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
G+ +H ++K I+ N L +ALL MY KCGN DA S+F+ + D+V+W +MI G
Sbjct: 373 YDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISG 432
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
+ Q+ +AL+ + P+ +ASV+SA L N+N+G +H L I+ GLE D
Sbjct: 433 FCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQD 492
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDD----------- 424
V ++LVDMY+K + + +F K+++AWNSIIS GL D
Sbjct: 493 VFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQ 552
Query: 425 -NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ PD+V++ SV+ + +S+ ++ G ++H Y +Q + S++ + AL++ Y KCG +
Sbjct: 553 YGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQ-RIPSDLQLENALIDMYIKCGFLK 611
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A+ +F M + N VTW+ MI G G GD +++LF +M + + P+++ F ++L++C+
Sbjct: 612 YAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCN 671
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G + EG K F M + P M+HYV +VDLL RAGRL++A F++N+PIEPD S++
Sbjct: 672 HCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIW 731
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
+ L C ++ +LG++ K+L++ P + YV + NLY + R +R MK++
Sbjct: 732 LSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQLLNLYGENELQDRAANLRASMKEK 791
Query: 664 GLSKSPGCSLVDLDIANDFSFS 685
GL K+PGCS +++ + D FS
Sbjct: 792 GLKKTPGCSWIEVGNSIDVFFS 813
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 220/443 (49%), Gaps = 32/443 (7%)
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLT 184
Y D ++FY R L F + +LKAC L ++ G +H I+ G D ++ T
Sbjct: 33 YVDALQFYS--RNPLNA-TRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITT 89
Query: 185 GLVDMYAKCRDIGSSRQVFD-----ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
L++ Y KC G++ +VFD E ++V W S++ GY + +EG+ F RM+
Sbjct: 90 SLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQL 149
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
V + +L L+ A L K +HGY ++ + L + L+ MY CG D
Sbjct: 150 FGVRPDAYSLCILLGASDG--HLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLD 207
Query: 300 ARSVFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
A +F EL ++V+W MI G+ ++G + +L+++ K + + S LSA
Sbjct: 208 AWRLFKELEDKGNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACC 267
Query: 359 QLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
Q ++ G VH ++LG E D V +L+ MY+KC ++ DA +F+ S K WN+
Sbjct: 268 QGEFVSFGMQVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNA 327
Query: 418 IISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+IS N + PD++T +V+S+C +G+ G +HA K+
Sbjct: 328 MISAYVGNGRSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRP 387
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
+ SNV + +ALL Y+KCG++ A +F+ ++ ++ V W +MI G+ +L +
Sbjct: 388 -IQSNVALQSALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFY 446
Query: 521 SDMLNEEVQPNEVIFTTILSACS 543
+ M +P+ I +++SAC+
Sbjct: 447 NSMTVYGEKPDSDIMASVVSACT 469
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 209/405 (51%), Gaps = 22/405 (5%)
Query: 69 HALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H L+ G ND C T L++MY V+ A +VFD + + MI Y N
Sbjct: 279 HCDLVKLGFENDPYVC-TSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGR 337
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TG 185
D ++ YK M+ D+ + VL +CC + D G +H E+VK + L +
Sbjct: 338 SYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSA 397
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ MY+KC + + +F+ ++VV+W SMI+G+ QN E L +N M + +
Sbjct: 398 LLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPD 457
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ S+V+AC L+ ++ G +HG +K G+E + + ++L+DMY K + + +VF
Sbjct: 458 SDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFS 517
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
++ +LV+W ++I Y ++G PD ++ LF+ FP+ V+I SVL + + + L
Sbjct: 518 DMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRK 577
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
G+ VH IR + D + NAL+DMY KC + A++IF+ + +++ WN +I+G
Sbjct: 578 GKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGS 637
Query: 425 N-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
+ ++PD +T +S++++C G ++ G L
Sbjct: 638 HGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKL 682
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 194/382 (50%), Gaps = 14/382 (3%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFD 104
S+ N+L C GS + HA L+ + +N + L++MY G+ A S+F+
Sbjct: 357 SLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFN 416
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
++ D ++ MI + N Y + +EFY M ++ D+ + + V+ AC L++++
Sbjct: 417 TIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNL 476
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G +H +K G D FV + LVDMY+K S VF + KN+V+W S+I+ Y +
Sbjct: 477 GCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCR 536
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
N + LF++M + + + +++ S++ + + + L +GK +HGY+++ I + L
Sbjct: 537 NGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQL 596
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
AL+DMY+KCG ++ A+ +F + +LV+W MI G G KA+ LF + +
Sbjct: 597 ENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGI 656
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSL-----GIRLGLEDYTVINALVDMYAKCHVIA 398
P+ +T S+L++ G + G + L GI +E Y I VD+ + +
Sbjct: 657 APDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNI---VDLLGRAGRLD 713
Query: 399 DA-RYIFETTSEKDVIAWNSII 419
DA ++ E D W S++
Sbjct: 714 DAYAFVKNLPIEPDRSIWLSLL 735
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 194/643 (30%), Positives = 344/643 (53%), Gaps = 29/643 (4%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQV 116
C + + HA L+V G +LV Y G A SV D MP + +++
Sbjct: 52 CPTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNA 111
Query: 117 MIRWYFLNDLYKDIVEFYKCM-RKRLKEHDNFVFSKVLKACCELRDIDEGM----KVHCE 171
I+ + + + +E Y M R D F + V+KAC L +++G V +
Sbjct: 112 AIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEAD 171
Query: 172 IVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
+V+ V P FV LVDM+AKC +G +R VF+ L++++ +WT+MI G V +
Sbjct: 172 VVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDA 231
Query: 231 LVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ LF+RMR EGF+ + + + +++ AC + + L G LHG ++ G+ ++ + AL+D
Sbjct: 232 MSLFSRMRSEGFL-ADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVD 290
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG + A VF + D+VSW+ +I GY+Q+G ++ LFT+ A PN T
Sbjct: 291 MYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNT 350
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTS 408
+AS+L + +++ G+ +H +R G + + +A +D Y++ I +A + E
Sbjct: 351 MASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMP 410
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
++D++ WNS+++G N PD VT+VSV+ C + G
Sbjct: 411 KRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKE 470
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
LHAY + +SS V AL++ Y KC + + +F + +++T T++ +I +G G
Sbjct: 471 LHAYVVRH-YMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHG 529
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
++ LF M + + P++V F +LS+CSH G++ +G + M +D+ P +HY
Sbjct: 530 HEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGKEHY 589
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C+VDL +R+G+L++A +F+ ++ E ++ + G L C +++R D+ E++ K++ E +P
Sbjct: 590 SCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQNP 649
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
Y++L+SN+YA+ G W V ++R +++ R L G SL+
Sbjct: 650 SDPGYHILLSNIYANAGMWSHVTRIRTMIENRSLKNKTGNSLI 692
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 207/616 (33%), Positives = 328/616 (53%), Gaps = 7/616 (1%)
Query: 66 KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
KA HA L+ G ++ LV++Y G + A+ VF+S+ N D S+ +I Y
Sbjct: 30 KAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQK 89
Query: 125 DL--YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSF 181
Y ++E ++ MR + FS V A + G++ H +K D F
Sbjct: 90 GTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKTSNFYDVF 149
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L++MY K + +R+VFD ++N VSW ++I+GY A E LF MR
Sbjct: 150 VGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREE 209
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
++ S+++A +H GK +H LK G+ + + AL+ MY KCG + DA
Sbjct: 210 GAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAF 269
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
F+ D ++W+AMI GY Q+G +AL LF + P+ T V++A + +G
Sbjct: 270 KTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIG 329
Query: 362 NLNMGRMVHSLGIRLGLEDYTVINALVD-MYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L G+ +H ++ G E D + AKC + DAR F+ E D++ W S
Sbjct: 330 ALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSCRM 389
Query: 421 GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
++ + P +T+ SV+ AC+SL A++ G +HA + K G S V +G+AL YAKCG
Sbjct: 390 QME-RIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGF-SLEVPIGSALSTMYAKCG 447
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ +VF M ++ +TW+AMI G G+G +L LF ++ + +P+ V F +LS
Sbjct: 448 SLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLS 507
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSH G+V G F M +F +P ++HY CMVD+L+RAG+L E EF+E+ I+ +
Sbjct: 508 ACSHMGLVERGKVYFRMMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGM 567
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
L+ L C Y ++LG +K++EL ++ Y+L+S++Y + GR V +VR LM
Sbjct: 568 CLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLM 627
Query: 661 KQRGLSKSPGCSLVDL 676
K RG++K PGCS ++L
Sbjct: 628 KLRGVNKEPGCSWIEL 643
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 207/438 (47%), Gaps = 50/438 (11%)
Query: 32 PTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLI-VDGLTNDKCNTKLVSMY 90
P H F + S P ++ G L+A HAL I + + L++MY
Sbjct: 111 PNGHTFSGVFTAASSSP-----------ETFGGLQA-HALAIKTSNFYDVFVGSSLINMY 158
Query: 91 GSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFS 150
G + AR VFD++P + S+ +I Y + + + E + MR+ HD F+++
Sbjct: 159 CKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYT 218
Query: 151 KVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
VL A + G ++HC +K G + V LV MY KC + + + F+ + DK
Sbjct: 219 SVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDK 278
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+ ++W++MI GY Q + E L LF M + ++ T ++ AC+ + AL +GK +H
Sbjct: 279 DDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIH 338
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
GY LK G E + + KCG++ DAR FD L D+V WT+ +
Sbjct: 339 GYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSCRM--------- 389
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
+ P+ +T+ASVL A + L L G+ +H+ I+ G + + +AL
Sbjct: 390 ---------QMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALS 440
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAV 431
MYAKC + D +F +D++ WN++ISGL N PD V
Sbjct: 441 TMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYV 500
Query: 432 TLVSVISACASLGAVQVG 449
T V+V+SAC+ +G V+ G
Sbjct: 501 TFVNVLSACSHMGLVERG 518
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 164/320 (51%), Gaps = 21/320 (6%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ C + + L +GK +H +L+ G + +L +L+++Y KCG+I A+ VF+ + + D
Sbjct: 16 LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKD 75
Query: 312 LVSWTAMIVGYTQSGYPDKA--LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW +I GY+Q G + ++LF + + PN T + V +A++ G
Sbjct: 76 VVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQA 135
Query: 370 HSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------ 422
H+L I+ D V ++L++MY K + DAR +F+T E++ ++W +IISG
Sbjct: 136 HALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMA 195
Query: 423 -----------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+ + D SV+SA V G +H + K GLLS VG A
Sbjct: 196 FEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSI-ASVGNA 254
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L+ Y KCG A F+ +K+ +TWSAMI GY GD +L LF +M +P+
Sbjct: 255 LVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPS 314
Query: 532 EVIFTTILSACSHTGMVGEG 551
E F +++ACS G + EG
Sbjct: 315 EFTFVGVINACSDIGALEEG 334
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 21/227 (9%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYI 403
P H + +L + +L G+ +H+ +R G + N+LV++YAKC I A+ +
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 404 FETTSEKDVIAWNSIISGLD-------------------DNVSPDAVTLVSVISACASLG 444
FE+ + KDV++WN +I+G +N P+ T V +A +S
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
G HA + K +V+VG++L+N Y K G AR VFD + E+NTV+W+ +I
Sbjct: 128 ETFGGLQAHALAIKTSNF-YDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATII 186
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
GY M+ + LF M EE ++ I+T++LSA + +V G
Sbjct: 187 SGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYG 233
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 209/623 (33%), Positives = 344/623 (55%), Gaps = 33/623 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNP--DFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLK 142
L+++Y A S+F SM N D S+ +I + N + K + F + + +
Sbjct: 93 LITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGV 152
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAK---CRDIG 197
+ + F+ V++AC + G+ + ++K G DS V G L+DM+ K D+
Sbjct: 153 YPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLE 212
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFVEGNQITLGSLVTA 255
S+R+VFD+ +KNVV+WT MI Q E + LF M G+V ++ TL L++
Sbjct: 213 SARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVP-DRFTLTGLISV 271
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA+++ L GK LH ++++ G+ ++ + +L+DMY KCG +++AR VFD + +++SW
Sbjct: 272 CAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSW 331
Query: 316 TAMIVGYTQSG--YPDKALKLFTDKKW-ADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
TA++ GY + G Y +A+++F++ PN T + VL A A L + + G VH
Sbjct: 332 TALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQ 391
Query: 373 GIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSI----ISGLDDNVS 427
I+LGL + N LV +YAK + AR F+ EK++++ + + + N
Sbjct: 392 TIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSE 451
Query: 428 PD-------------AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
D + T S++S A +G + G +HA K G +++ V AL++
Sbjct: 452 QDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGF-RTDLSVNNALIS 510
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y+KCG+ ++A VF+ M + N +TW+++I G+ G +L LF +ML V+PN+V
Sbjct: 511 MYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVT 570
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ +LSACSH G++ E WK F SM + VP M+HY CMVDLL R+G L EA+EF+ +M
Sbjct: 571 YIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSM 630
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
P + D ++ FL C ++ LGE K +LE P Y+L+SNLYA++GRW V
Sbjct: 631 PFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVA 690
Query: 655 QVRELMKQRGLSKSPGCSLVDLD 677
+R+ MKQ+ ++K G S ++++
Sbjct: 691 AIRKNMKQKQITKEAGSSWIEVE 713
>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Brachypodium distachyon]
Length = 757
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/680 (31%), Positives = 346/680 (50%), Gaps = 42/680 (6%)
Query: 36 ELDQTFASFHSLPSIP----------------CLNLLGLCKSTGSLKAFHALLIVDG--L 77
L +F S+PS P C L LC G L H L D +
Sbjct: 16 RLSAALHAFQSIPSSPAPAPLSAATYAALLATCSRLRALC--LGCLVHRHLLASPDPNLV 73
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
N N L++MYG + AR VFD MP + S+ +I + N D + + M
Sbjct: 74 RNTVLNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSM 133
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV-GGPDSFVLTGLVDMYAKCRDI 196
+ D F ++AC EL DI G +VH + +K G D V LV MY+K +
Sbjct: 134 LRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLV 193
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTA 255
+F +K+ +SW S+IAG+ Q C E L +F M EG N+ GS+ +A
Sbjct: 194 ADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSA 253
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C L +L G+ +H +K ++ NS+ +L DMY +C + A+ VF + + DLVSW
Sbjct: 254 CGVLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSW 313
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++I + G +A+ L ++ + + P+ +T+ +L A + GR++HS ++
Sbjct: 314 NSIINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVK 373
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
LGL+ D +V N+L+ MYA+C + A +F T ++DV+ WNSI++ +
Sbjct: 374 LGLDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKL 433
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
S D ++L +V+SA A LG ++ +H + K GL++ + + L++ YA
Sbjct: 434 FNLLQRSLPSLDRISLNNVLSASAELGYFEMVKQVHTCTFKVGLVN-DTMLSNGLIDTYA 492
Query: 478 KCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
KCG A +F+ M + V +WS++I GY G +L LF+ M N V+PN V F
Sbjct: 493 KCGSLDDAVKLFEMMGTNSDVFSWSSLIVGYAQSGYPRKALDLFARMRNLGVRPNHVTFV 552
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L+ACS G+V EG + M + +P+ +H C++DLLARAGRL EA +F++ MP
Sbjct: 553 GVLTACSRVGLVDEGCYYYSIMEPEHGVLPTREHCSCVIDLLARAGRLTEAAKFVDQMPF 612
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
EPD+ ++ L G ++ ++G + +L + P + YVL+ N+Y++ G W ++
Sbjct: 613 EPDIVMWKTLLAGSKTHNDVEMGRRAAEGILNIDPSHSAAYVLLCNIYSASGDWNEFARL 672
Query: 657 RELMKQRGLSKSPGCSLVDL 676
++ M+ G+ KSPG S V L
Sbjct: 673 KKAMRSSGVKKSPGKSWVKL 692
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/642 (33%), Positives = 347/642 (54%), Gaps = 35/642 (5%)
Query: 66 KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMP---NPDFYSFQVMIRWY 121
K HA LI + D L+S+Y G A VF++M D S+ M+ Y
Sbjct: 82 KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 122 FLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
N D ++ F + + L +D + ++ V++AC + G ++K G +S
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPND-YCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 181 FVLTG--LVDMYAKCRD-IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
V G L+DM+ K + ++ +VFD+ + NVV+WT MI +Q +E + F M
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC--- 294
E ++ TL S+ +ACA+L L GK LH + ++ G+ + +L+DMY KC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVECSLVDMYAKCSAD 318
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQS-GYPDKALKLFTDK-KWADFFPNHVTIAS 352
G++ D R VFD + ++SWTA+I GY ++ +A+ LF++ PNH T +S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
A L + +G+ V + GL + +V N+++ M+ K + DA+ FE+ SEK+
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 412 VIAWNSIISGLDDNVSPD-----------------AVTLVSVISACASLGAVQVGSSLHA 454
++++N+ + G N++ + A T S++S A++G+++ G +H+
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
K GL S N V AL++ Y+KCG +A VF+ M +N ++W++MI G+ G
Sbjct: 499 QVVKLGL-SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
L F+ M+ E V+PNEV + ILSACSH G+V EGW+ F SM D K P M+HY CM
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
VDLL RAG L +A EF+ MP + DV ++ FL C ++S +LG++ +K+LEL P++
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+ +SN+YA G+W ++R MK+R L K GCS +++
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/530 (27%), Positives = 261/530 (49%), Gaps = 41/530 (7%)
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
++++R DL + R ++ D+ FS +LK+C RD G VH +++
Sbjct: 31 RLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIE 90
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL----DKNVVSWTSMIAGYVQNDCAQE 229
PDS + L+ +Y+K D + VF ET+ ++VVSW++M+A Y N +
Sbjct: 91 FDIEPDSVLYNSLISLYSKSGDSAKAEDVF-ETMRRFGKRDVVSWSAMMACYGNNGRELD 149
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALL 288
+ +F E + N +++ AC+ + G+ G+++K G E + + +L+
Sbjct: 150 AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLI 209
Query: 289 DMYVKCGN-IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
DM+VK N +A VFD++ +++V+WT MI Q G+P +A++ F D + F +
Sbjct: 210 DMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDK 269
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHV---IADARYIF 404
T++SV SA A+L NL++G+ +HS IR GL D V +LVDMYAKC + D R +F
Sbjct: 270 FTLSSVFSACAELENLSLGKQLHSWAIRSGLVD-DVECSLVDMYAKCSADGSVDDCRKVF 328
Query: 405 ETTSEKDVIAWNSIISGLDDN-------------------VSPDAVTLVSVISACASLGA 445
+ + V++W ++I+G N V P+ T S AC +L
Sbjct: 329 DRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+VG + + K+G L+SN V ++++ + K + A+ F+++ EKN V+++ +
Sbjct: 389 PRVGKQVLGQAFKRG-LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLD 447
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
G + + L S++ E+ + F ++LS ++ G + +G + + K
Sbjct: 448 GTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV---KLG 504
Query: 566 PSMKHYVC--MVDLLARAGRLEEA---LEFMENMPIEPDVSLFGAFL-HG 609
S VC ++ + ++ G ++ A FMEN + S+ F HG
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
Length = 695
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 207/639 (32%), Positives = 349/639 (54%), Gaps = 32/639 (5%)
Query: 65 LKAFHALLIVDGL-TNDKCNTKLVSMYGSF--GHVKYARSVFDSMPNPDFYSFQVMIRWY 121
++ HA L+V G T+ +LV Y G + +A VFD M + +++ +I+
Sbjct: 60 VRRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSFAWNAVIKGL 119
Query: 122 FLNDLYKDIVEFYKCMRKRLKE-HDNFVFSKVLKACCELRDIDEGMKVH----CEIVK-V 175
+ + +++Y M D F + VLKAC L +++G KV +I + +
Sbjct: 120 VDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENVEADIARGI 179
Query: 176 GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
+ FV LVDM+AKC +G +R VF+ +++ +WT+MI G V E + L
Sbjct: 180 AKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLK 239
Query: 236 RMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
RM+ EGF + + L +++ AC K++ L G LHG ++K G+ +++ ++ AL+DMY KC
Sbjct: 240 RMKSEGF-RPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLNALVDMYCKC 298
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+ A S+F + D++SW+ +I G++Q+ ++ LF++ + PN T+AS+L
Sbjct: 299 ARLDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASIL 358
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVI 413
+ ++L G+ +H +R GLE + +AL+D Y++ I +A +FE T + D++
Sbjct: 359 PSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLV 418
Query: 414 AWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
NS+I G L + + PD VT+VSV+ C + G LHAY+
Sbjct: 419 VSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYA 478
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
+ + SS V AL + Y KCG + A +F M E+NTVT++ +I G G +
Sbjct: 479 IRHNI-SSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLISSLGKHGHAEQA 537
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY-SMCRDFKFVPSMKHYVCMV 575
LF M + V P++V F +LS CSH G++ +G CFY SM RD+ P +HY C+V
Sbjct: 538 FFLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGL-CFYDSMLRDYNISPDKEHYSCIV 596
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DL +R+GRL+ A F+ N+ P++ + G L C ++R D+ E++ +++ E +P+
Sbjct: 597 DLYSRSGRLDAAWSFIANLQEVPEIDVLGCLLSACREHNRMDIAELVAERIFEQNPNDPG 656
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
Y++L+SN+YAS G W V ++R ++++R L K G SL+
Sbjct: 657 YHILLSNIYASAGMWSEVTRIRTMIEERSLKKRTGNSLI 695
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 199/611 (32%), Positives = 318/611 (52%), Gaps = 22/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++++Y G + A VF MP+ D +F +I + + +E ++ M+ D
Sbjct: 184 VITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPD 243
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
S +L AC L D+ +G ++H + K G +++ G L+D+Y KC D+ ++ +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 205 ETLDKNVVSWTSMIAGYVQ-NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ NVV W M+ + Q ND A+ LF +M+ + NQ T ++ C R +
Sbjct: 304 SSDRTNVVLWNLMLVAFGQINDLAKS-FELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H +K G E + ++ L+DMY K G + AR V + L D+VSWT+MI GY
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q AL F + + +P+++ +AS +S A + + G +H+ G D +
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVS 482
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
+ NALV++YA+C I +A FE KD I N ++SG
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V + T VS +SA A+L ++ G +HA K G S VG AL++ Y KCG + A
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDA 601
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+M F M E+N V+W+ +I G G +L LF M E ++PN+V F +L+ACSH
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHV 661
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG F SM ++ P HY C++D+ RAG+L+ A +F+E MPI D ++
Sbjct: 662 GLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRT 721
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ ++GE K +LEL P + YVL+SN YA +W +QVR++M+ RG+
Sbjct: 722 LLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGV 781
Query: 666 SKSPGCSLVDL 676
K PG S +++
Sbjct: 782 RKEPGRSWIEV 792
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 250/504 (49%), Gaps = 33/504 (6%)
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H + V G G V L+D+Y+K + +R+VF+E ++ VSW +M++GY QN
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+E L L+ +M V L S++++C K QG+ +H K G +
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
A++ +Y++CG+ R A VF ++ D V++ +I G+ Q G+ + AL++F + +++ P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF 404
+ VTI+S+L+A A LG+L G +HS + G+ DY + +L+D+Y KC + A IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 405 ETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQ 447
++ +V+ WN ++ + P+ T ++ C +
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G +H+ S K G S++YV L++ Y+K G + AR V + ++EK+ V+W++MI GY
Sbjct: 363 LGEQIHSLSVKTG-FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
+LA F +M + P+ + + +S C+ + +G + ++ +
Sbjct: 422 VQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQ-IHARIYVSGYSGD 480
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF---DLGEVMIK 624
+ + +V+L AR GR+ EA E M ++ ++ G GL S F L E +K
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEMELKDGIT-------GNGLVSGFAQSGLHEEALK 533
Query: 625 KMLELHPD--KACYYVLVSNLYAS 646
+ + K + VS L AS
Sbjct: 534 VFMRMDQSGVKHNVFTFVSALSAS 557
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 214/634 (33%), Positives = 334/634 (52%), Gaps = 30/634 (4%)
Query: 69 HALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN---- 124
+ LL VDG + + LV MY G V+ A +F+ M D ++ ++ N
Sbjct: 139 YGLLAVDG-GSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECG 197
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVL 183
D + +VE + ++ L+AC L +++ G +H VKVG DS V+
Sbjct: 198 DGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVI 257
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ L MY+KC + +F E +K+VVSWTS+I Y +E + LF M E ++
Sbjct: 258 SALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQ 317
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ + + L++ +H GK H I+K N + AL+ MY K + +A V
Sbjct: 318 PDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRV 377
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD---FFPNHVTIASVLSASAQL 360
F L D SW MIVGY ++G K L+L+ + ++ D F + ++ S +S+ ++L
Sbjct: 378 FRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRL 437
Query: 361 GNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSI 418
L +GR H I+ L ED +V N L+ MY +C A IF K DV+ WN++
Sbjct: 438 VELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTL 497
Query: 419 ISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
IS L + ++P++ TL++VISACA+L A++ G +H+Y + G
Sbjct: 498 ISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGW 557
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
+V + TAL++ YAKCG +AR +FD+M + + V W+ MI GYGM G+ +L LF
Sbjct: 558 -DYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFG 616
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
M ++PN V F ILSAC H+G++ EG + F M + + P++KHY CMVDLL ++
Sbjct: 617 KMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGK-YSLEPNLKHYACMVDLLGKS 675
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G L+EA + + MP+EPD ++G L C L+ F++G + KK + YY+L+S
Sbjct: 676 GHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAFASDAENEGYYILIS 735
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
N Y S +W + ++RE MK G+ K G S VD
Sbjct: 736 NSYGSAKKWDEIEKLREAMKNHGVQKGAGWSAVD 769
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 169/593 (28%), Positives = 286/593 (48%), Gaps = 42/593 (7%)
Query: 69 HALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HAL + GL+ KLVS Y S G A F + P PD + + +IR + +
Sbjct: 32 HALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASDF 91
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-----GPDSFV 182
+ ++ M F A EL + G VH V+ G G V
Sbjct: 92 VAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVAV 151
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM----R 238
+ LV MYA+C + + ++F+E +++VV+WT++++G V+N +GL M
Sbjct: 152 PSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAG 211
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+G N T+ S + AC L L+ G+ LHGY +K+G+ + +++AL MY KC +
Sbjct: 212 DGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTE 271
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DA S+F EL D+VSWT++I Y G +A++LF + + P+ V ++ +LS
Sbjct: 272 DACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLG 331
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
GN++ G+ H++ ++ D ++ NAL+ MY K ++ +A +F ++D +WN
Sbjct: 332 NSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNL 391
Query: 418 IISG------------------LDDNVS--PDAVTLVSVISACASLGAVQVGSSLHAYST 457
+I G D DA +LVS IS+C+ L +++G S H YS
Sbjct: 392 MIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSI 451
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGS 516
K L + V L+ Y +CG A +F + K + VTW+ +I Y G +
Sbjct: 452 KH-WLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTA 510
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
++L+ ML E + PN T++SAC++ + G K +S ++ + + ++D
Sbjct: 511 VSLYDQMLTEGLTPNSTTLITVISACANLVALERGEK-IHSYVKEMGWDYDVSINTALID 569
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
+ A+ G+L A ++M ++ DV + + G G++ GE K+ LEL
Sbjct: 570 MYAKCGQLGTARRIFDSM-LQHDVVAWNVMISGYGMH-----GEA--KQALEL 614
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 177/367 (48%), Gaps = 16/367 (4%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
KAFHA+++ ++ L+SMYG F V A VF + D S+ +MI Y
Sbjct: 340 KAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKA 399
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVF-------SKVLKACCELRDIDEGMKVHCEIVKVG- 176
+E Y+ M+ R D + F + +C L ++ G HC +K
Sbjct: 400 GCDVKCLELYREMQFR----DTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWL 455
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFD-ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
DS V L+ MY +C + ++F L +VV+W ++I+ Y + + L++
Sbjct: 456 DEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYD 515
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
+M + N TL ++++ACA L AL +G+ +H Y+ ++G + + + TAL+DMY KCG
Sbjct: 516 QMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCG 575
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+ AR +FD + D+V+W MI GY G +AL+LF + PN VT ++LS
Sbjct: 576 QLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILS 635
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR-YIFETTSEKDVI 413
A G L GR + + + LE + +VD+ K + +A + E D
Sbjct: 636 ACCHSGLLEEGRQLFTRMGKYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGG 695
Query: 414 AWNSIIS 420
W +++S
Sbjct: 696 IWGTLLS 702
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 154/323 (47%), Gaps = 30/323 (9%)
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H + G+ +V L+ Y G A F D W ++I + +
Sbjct: 31 VHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASD 90
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-----EDYT 382
AL + P+ T+ SA+A+LG L +G VH+ +R GL
Sbjct: 91 FVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVA 150
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------------- 422
V ++LV MYA+C V+ DA +FE E+DV+AW +++SG
Sbjct: 151 VPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLA 210
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
D P++ T+ S + AC L + G LH Y+ K G+ S + + +AL + Y+KC
Sbjct: 211 GDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVI-SALFSMYSKCHS 269
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ A +F + EK+ V+W+++IG Y +G ++ LF +M+ +QP++V+ + +LS
Sbjct: 270 TEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSG 329
Query: 542 CSHTGMVGEGWKCFYS--MCRDF 562
++G V G K F++ M R+F
Sbjct: 330 LGNSGNV-HGGKAFHAVIMKRNF 351
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 131/305 (42%), Gaps = 35/305 (11%)
Query: 369 VHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------ 421
VH+L + GL ++ LV Y+ A F D WNS+I
Sbjct: 31 VHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCASD 90
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS---SNVY 467
L + P T+ SA A LGA+ VG+S+HAY + GLL+ +V
Sbjct: 91 FVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSVA 150
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML--- 524
V ++L+ YA+CG + A +F+ MRE++ V W+A++ G G+ G L +M+
Sbjct: 151 VPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLA 210
Query: 525 -NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+ + +PN + L AC + G +C + S + + ++
Sbjct: 211 GDGKARPNSRTMESGLEACGVLDELNSG-RCLHGYAVKVGVGDSPMVISALFSMYSKCHS 269
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYS-RFDLGEVM--IKKMLE--LHPDKACYYV 638
E+A +P E DV + + + G+Y R + E M ++M+E L PD
Sbjct: 270 TEDACSLFPELP-EKDVVSWTSLI---GIYCWRGLIREAMELFQEMMESGLQPDDVLVSC 325
Query: 639 LVSNL 643
L+S L
Sbjct: 326 LLSGL 330
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 215/642 (33%), Positives = 347/642 (54%), Gaps = 35/642 (5%)
Query: 66 KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMP---NPDFYSFQVMIRWY 121
K HA LI + D L+S+Y G A VF++M D S+ M+ Y
Sbjct: 82 KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 122 FLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
N D ++ F + + L +D + ++ V++AC + G ++K G +S
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPND-YCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 181 FVLTG--LVDMYAKCRD-IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
V G L+DM+ K + ++ +VFD+ + NVV+WT MI +Q +E + F M
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC--- 294
E ++ TL S+ +ACA+L L GK LH + ++ G+ + +L+DMY KC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVECSLVDMYAKCSAD 318
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQS-GYPDKALKLFTDK-KWADFFPNHVTIAS 352
G++ D R VFD + ++SWTA+I GY ++ +A+ LF++ PNH T +S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
A L + +G+ V + GL + +V N+++ M+ K + DA+ FE+ SEK+
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 412 VIAWNSIISGLDDNVSPD-----------------AVTLVSVISACASLGAVQVGSSLHA 454
++++N+ + G N++ + A T S++S A++G+++ G +H+
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
K GL S N V AL++ Y+KCG +A VF+ M +N ++W++MI G+ G
Sbjct: 499 QVVKLGL-SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
L F+ M+ E V+PNEV + ILSACSH G+V EGW+ F SM D K P M+HY CM
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
VDLL RAG L +A EF+ MP + DV ++ FL C ++S +LG++ +K+LEL P++
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+ +SN+YA G+W ++R MK+R L K GCS +++
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 253/507 (49%), Gaps = 41/507 (8%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
R ++ D+ FS +LK+C RD G VH +++ PDS + L+ +Y+K D
Sbjct: 54 RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 197 GSSRQVFDETL----DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
+ VF ET+ ++VVSW++M+A Y N + + +F E + N ++
Sbjct: 114 AKAEDVF-ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172
Query: 253 VTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGN-IRDARSVFDELCSI 310
+ AC+ + G+ G+++K G E + + +L+DM+VK N +A VFD++ +
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
++V+WT MI Q G+P +A++ F D + F + T++SV SA A+L NL++G+ +H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 371 SLGIRLGLEDYTVINALVDMYAKCHV---IADARYIFETTSEKDVIAWNSIISGLDDN-- 425
S IR GL D V +LVDMYAKC + D R +F+ + V++W ++I+G N
Sbjct: 293 SWAIRSGLVD-DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
V P+ T S AC +L +VG + + K+G L+SN V
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG-LASNSSV 410
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
++++ + K + A+ F+++ EKN V+++ + G + + L S++ E+
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEE 586
+ F ++LS ++ G + +G + + K S VC ++ + ++ G ++
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQV---VKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 587 A---LEFMENMPIEPDVSLFGAFL-HG 609
A FMEN + S+ F HG
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHG 554
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 347 bits (889), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 207/633 (32%), Positives = 348/633 (54%), Gaps = 23/633 (3%)
Query: 66 KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H ++ G D+ T LV MYG ++ A+ VFD M D + +I Y N
Sbjct: 122 RKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVEN 181
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVL 183
+Y++ +E ++ M D+ + V +AC ++ + VH +++ G D +
Sbjct: 182 GVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLS 241
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+ MY++C + ++++F+ D++ WTSMI+ Y QN+C +E L +F +M++ VE
Sbjct: 242 NSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVE 301
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS-HLVTALLDMYVKCGNIRDARS 302
N +T+ S++ +CA+L L +GK +H ++L+ + + L AL+D Y C +
Sbjct: 302 PNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEK 361
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+ + + ++VSW +I Y + G D+A+ F P+ ++AS +SASA G+
Sbjct: 362 LLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGS 421
Query: 363 LNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+ G+ +H ++ G D V N+L+DMY+KC + A IF K ++AWN +I G
Sbjct: 422 IQFGQQIHGHVMKRGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGF 481
Query: 423 DDN-VSPDA----------------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
N +S +A VT +S I AC++LG + G +H G ++
Sbjct: 482 SQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGN-QND 540
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+Y+ TAL++ YAKCGD Q+A+ VFD++ EK+ V+WS MI +G+ G + +LF M+
Sbjct: 541 LYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVL 600
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD-FKFVPSMKHYVCMVDLLARAGRL 584
++PNEV F ILSAC H G V EG K +++ RD + VP+++H+ +VDLL+RAG +
Sbjct: 601 SNIKPNEVTFMNILSACRHAGSVKEG-KFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDI 659
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
A E ++++ S++GA L+GC +Y R D+ E + +++ + D YY L+SN+Y
Sbjct: 660 NGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIY 719
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
A G W +VR M+ GL K PG S V++D
Sbjct: 720 AEGGNWYESRKVRSKMEGMGLKKVPGYSTVEID 752
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 173/619 (27%), Positives = 331/619 (53%), Gaps = 38/619 (6%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
+ L C + L HA L+V L N+ +TKL+ Y G ++ +R VF + P+PD
Sbjct: 5 MPLFRTCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDS 64
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYK---CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ F V+I+ + N L+++++ + M +L ++ F++ V++A + ++ G K+
Sbjct: 65 FMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKL 124
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H I+K G D + T LV MY + + +++VFDE +++V W+S+I+ YV+N
Sbjct: 125 HGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVY 184
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+EGL +F M + + + L S+ AC K+ L K +HGY+++ G+ + L +L
Sbjct: 185 REGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSL 244
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MY +CG + A+ +F+ + WT+MI Y Q+ ++AL +F + ++ PN
Sbjct: 245 IVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPND 304
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFE 405
VT+ SVL++ A+LG L G+ VH +R +G+ + AL+D Y+ C ++ +
Sbjct: 305 VTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLH 364
Query: 406 TTSEKDVIAWNSIIS-----GLDDN------------VSPDAVTLVSVISACASLGAVQV 448
+ +++++WN++IS GL+D + PD+ +L S ISA AS G++Q
Sbjct: 365 SIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQF 424
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H + K+G +V +L++ Y+KCG A SA +F+ ++ K+ V W+ MI G+
Sbjct: 425 GQQIHGHVMKRGFFDE--FVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFS 482
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG-W---KCFYSMCRDFKF 564
G +L+LF +M ++ N+V F + + ACS+ G + +G W K + ++ +
Sbjct: 483 QNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLY 542
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
+ + +VD+ A+ G L+ A + +++ +E V + + G++ + + +
Sbjct: 543 IDT-----ALVDMYAKCGDLQTAQKVFDSI-VEKSVVSWSTMIAAHGIHGQINAATSLFH 596
Query: 625 KML--ELHPDKACYYVLVS 641
KM+ + P++ + ++S
Sbjct: 597 KMVLSNIKPNEVTFMNILS 615
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 205/406 (50%), Gaps = 25/406 (6%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
++ + + C LR + + +H +V + T L++ Y++ + SSR VF
Sbjct: 3 LYMPLFRTCSTLRRLTQ---LHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTH 59
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFN---RMREGFVEGNQITLGSLVTACAKLRALH 263
+ ++ +I ++ N +E L LFN +M + S++ A + L
Sbjct: 60 PSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELI 119
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ LHG ILK G + + T+L+ MY + +RDA+ VFDE+C DLV W+++I Y
Sbjct: 120 VGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYV 179
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYT 382
++G + L++F P+ V + SV A ++G L + + VH +R G+ D +
Sbjct: 180 ENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGS 239
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
+ N+L+ MY++C + A+ +FE ++ W S+IS + N
Sbjct: 240 LSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSE 299
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V P+ VT++SV+++CA LG ++ G S+H + + + + + +G AL++FY+ C S
Sbjct: 300 VEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSC 359
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
+ ++ +N V+W+ +I Y +G ++A F+ M+ + + P+
Sbjct: 360 EKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPD 405
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 349/664 (52%), Gaps = 36/664 (5%)
Query: 36 ELD-QTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSF 93
E+D F+S + + C L G + H I G +D T LV Y
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFG--------RQLHCQCIKFGFLDDVSVGTSLVDTYMKG 141
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
+ K R VFD M + ++ +I Y N + +++ + M+ + ++F F+ L
Sbjct: 142 SNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL 201
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
E G++VH +VK G + V L+++Y KC ++ +R +FD+T K+VV
Sbjct: 202 GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 261
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+W SMI+GY N E L +F MR +V ++ + S++ CA L+ L + LH +
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGYTQSGYPDKA 331
+K G + ++ TAL+ Y KC + DA +F E+ C ++VSWTAMI G+ Q+ ++A
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDM 390
+ LF++ K PN T + +L+A + VH+ ++ E TV AL+D
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDA 437
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTL 433
Y K + +A +F +KD++AW+++++G + P+ T
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 434 VSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
S+++ CA+ A + G H ++ K L S++ V +ALL YAK G+ +SA VF
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKS-RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
REK+ V+W++MI GY G +L +F +M +V+ + V F + +AC+H G+V EG
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
K F M RD K P+ +H CMVDL +RAG+LE+A++ +ENMP +++ L C +
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRV 676
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+ + +LG + +K++ + P+ + YVL+SN+YA G W +VR+LM +R + K PG S
Sbjct: 677 HKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Query: 673 LVDL 676
+++
Sbjct: 737 WIEV 740
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 218/455 (47%), Gaps = 37/455 (8%)
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
++ +FD++ ++ S+ S++ G+ ++ QE LF + +E + S++ A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
L G+ LH +K G + + T+L+D Y+K N +D R VFDE+ ++V+WT
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
+I GY ++ D+ L LF + PN T A+ L A+ G G VH++ ++ G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 378 LED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------- 425
L+ V N+L+++Y KC + AR +F+ T K V+ WNS+ISG N
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
V + SVI CA+L ++ LH K G L + TAL+ Y+KC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ-NIRTALMVAYSKC 343
Query: 480 GDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGG-GSLALFSDMLNEEVQPNEVIFTT 537
A +F + N V+W+AMI G+ +Q DG ++ LFS+M + V+PNE ++
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGF-LQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 538 ILSA---CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
IL+A S + + + K Y S ++D + G++EEA + +
Sbjct: 403 ILTALPVISPSEVHAQVVKTNYER--------SSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
+ D+ + A L G Y++ E IK EL
Sbjct: 455 D-DKDIVAWSAMLAG---YAQTGETEAAIKMFGEL 485
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 19/271 (7%)
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
V + +A ++FD+ D S+ +++ G+++ G +A +LF + + +
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEK 410
SVL SA L + GR +H I+ G L+D +V +LVD Y K D R +F+ E+
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 411 DVIAWNSIISG-----LDDNV------------SPDAVTLVSVISACASLGAVQVGSSLH 453
+V+ W ++ISG ++D V P++ T + + A G G +H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
K G L + V +L+N Y KCG+ + AR++FD K+ VTW++MI GY G
Sbjct: 218 TVVVKNG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
+L +F M V+ +E F +++ C++
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 213/643 (33%), Positives = 347/643 (53%), Gaps = 24/643 (3%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFL 123
K H ++ + L D T L+ MY FG A VF + + + + VMI +
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+ + + ++ Y + + + F+ L AC + + G ++HC++VK+G D +V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+ MY+KC +G + VF +DK + W +M+A Y +ND L LF MR+ V
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ TL ++++ C+ L + GK +H + K I+ S + +ALL +Y KCG DA
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD--FFPNHVTIASVLSASAQL 360
VF + D+V+W ++I G ++G +ALK+F D K D P+ + SV +A A L
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
L G VH I+ GL + V ++L+D+Y+KC + A +F + S ++++AWNS+I
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
S L + PD+V++ SV+ A +S ++ G SLH Y+ + G+
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI- 608
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S+ ++ AL++ Y KCG ++ A +F M+ K+ +TW+ MI GYG GD +L+LF +
Sbjct: 609 PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDE 668
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M P++V F +++SAC+H+G V EG F M +D+ P+M+HY MVDLL RAG
Sbjct: 669 MKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAG 728
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
LEEA F++ MPIE D S++ L + +LG + +K+L + P++ YV + N
Sbjct: 729 LLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLIN 788
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
LY G ++ LMK++GL K PGCS +++ + FS
Sbjct: 789 LYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFS 831
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 197/673 (29%), Positives = 321/673 (47%), Gaps = 57/673 (8%)
Query: 33 TQHELDQTF-ASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLV 87
++H+ F S + PS LL C + +L K H ++V G D T LV
Sbjct: 48 SKHDGSSPFWTSVFTFPS-----LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLV 102
Query: 88 SMYGSFGHVKYARSVFDSMPNP-------DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+MY G + YA VFD D + MI YF +K+ V ++ M
Sbjct: 103 NMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVF 162
Query: 141 LKEHDNFVFSKVLKACCELRDI--DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
D F S V+ C+ + +EG ++H +++ DSF+ T L+DMY K
Sbjct: 163 GVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 198 SSRQVFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ +VF E DK NVV W MI G+ + + L L+ + V+ + + AC
Sbjct: 223 DAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGAC 282
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
++ G+ +H ++K+G+ + ++ T+LL MY KCG + +A +VF + L W
Sbjct: 283 SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
AM+ Y ++ Y AL LF + P+ T+++V+S + LG N G+ VH+ +
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 377 GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
++ + I +AL+ +Y+KC DA +F++ EKD++AW S+ISGL
Sbjct: 403 PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVF 462
Query: 423 ------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
DD++ PD+ + SV +ACA L A++ G +H K GL+ NV+VG++L++ Y
Sbjct: 463 GDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV-LNVFVGSSLIDLY 521
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+KCG + A VF +M +N V W++MI Y S+ LF+ ML++ + P+ V T
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMP 595
++L A S T + +G K + +PS H ++D+ + G + A + M
Sbjct: 582 SVLVAISSTASLLKG-KSLHGYTLRLG-IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ 639
Query: 596 ----IEPDVSLFGAFLHG--CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
I ++ ++G HG S FD +KK E PD + L+S S G
Sbjct: 640 HKSLITWNLMIYGYGSHGDCITALSLFD----EMKKAGE-SPDDVTFLSLISACNHS-GF 693
Query: 650 WIRVNQVRELMKQ 662
+ E MKQ
Sbjct: 694 VEEGKNIFEFMKQ 706
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 137/309 (44%), Gaps = 35/309 (11%)
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRM 368
I S + I Q G +AL L++ + F+ + T S+L A + L NL+ G+
Sbjct: 22 ISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKT 81
Query: 369 VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE-------KDVIAWNSIIS 420
+H + LG D + +LV+MY KC + A +F+ S+ +DV WNS+I
Sbjct: 82 IHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMID 141
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAV--QVGSSLHAYSTKQGL 461
G L V PDA +L V+S G + G +H + +
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS- 200
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALF 520
L ++ ++ TAL++ Y K G + A VF + +K N V W+ MI G+G G SL L+
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLL 578
N V+ FT L ACS + G G + C K YVC ++ +
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH---CDVVKMGLHNDPYVCTSLLSMY 317
Query: 579 ARAGRLEEA 587
++ G + EA
Sbjct: 318 SKCGMVGEA 326
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/556 (34%), Positives = 319/556 (57%), Gaps = 20/556 (3%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKC-RDIGSSRQVFDE 205
+++ +L+ C ++ + G+++H ++K G D FV L+ +Y K D +R+VFD
Sbjct: 120 LYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDG 179
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
K+V+SWTSMI+GYV+ L LF +M VE N TL +++ AC++L L G
Sbjct: 180 LFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLG 239
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ HG +L G + N + +AL+DM+ + + DAR +FDEL D + WT++I T++
Sbjct: 240 RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRN 299
Query: 326 GYPDKALKLF-TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+ D+AL+ F + ++ P+ T +VL+A LG L G+ VH+ I G V+
Sbjct: 300 DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVV 359
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV--------- 434
++LVDMY KC + +++ IF+ K+ ++W++++ G N +V +
Sbjct: 360 ESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL 419
Query: 435 ----SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
+++ CA L AV+ G +H ++G +V V +AL++ YAKCG + A+ +FD
Sbjct: 420 YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWR-DVIVESALVDLYAKCGCIEYAQTIFD 478
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
M +N +TW++MIGG+ G G +L +F+ M+ E ++P+ + F IL ACSH G+V E
Sbjct: 479 QMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDE 538
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G + F SM +D+ ++HY CMVDLL RAG LEEA +E D SL+ A L C
Sbjct: 539 GREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGAC 598
Query: 611 GLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
+ +++ E + K+++EL PD YVL++N+Y + GRW ++R LMK RG++K PG
Sbjct: 599 TTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPG 658
Query: 671 CSLVDL--DIANDFSF 684
S ++ ++ + F F
Sbjct: 659 KSWIETKNNLGSSFDF 674
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 225/451 (49%), Gaps = 35/451 (7%)
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L L + G + + SL+ C K+ A + G +H +++K G+E + + +LL +
Sbjct: 103 LQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTL 162
Query: 291 YVKCG-NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
Y K G + + R VFD L D++SWT+MI GY + G P +L+LF PN T
Sbjct: 163 YFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFT 222
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+++V+ A ++LG+L +GR+ H + + G + +Y + +AL+DM+ + + DAR +F+
Sbjct: 223 LSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELL 282
Query: 409 EKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
E D I W SIIS L D + PD T +V++AC +LG ++ G
Sbjct: 283 EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 342
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+HA G NV V ++L++ Y KCG ++ +FD M KN+V+WSA++GGY
Sbjct: 343 EVHAKVITTG-FCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQN 401
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
GD + +F M E+V + F TIL C+ V +G + R + +
Sbjct: 402 GDFKSVIQIFRKM--EKV--DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE 457
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDV---SLFGAFLHGCGLYSRFDLGEVMIKKML 627
+VDL A+ G +E A + MP+ + S+ G F + M+K+ +
Sbjct: 458 SA-LVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGI 516
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
+ PD Y + L+A R + V++ RE
Sbjct: 517 K--PD---YISFIGILFACSHRGL-VDEGRE 541
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 229/461 (49%), Gaps = 29/461 (6%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFG-HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA +I GL D+ L+++Y G R VFD + D S+ MI Y
Sbjct: 141 HAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGK 200
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TG 185
+ +E + M E + F S V+KAC EL D+ G H ++ G ++V+ +
Sbjct: 201 PMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASA 260
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEG 244
L+DM+ + + +RQ+FDE L+ + + WTS+I+ +ND E L F M R+ +
Sbjct: 261 LIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCP 320
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ T G+++TAC L L QGK +H ++ G N + ++L+DMY KCG++ +++ +F
Sbjct: 321 DGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIF 380
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + + VSW+A++ GY Q+G +++F + D + ++L A L +
Sbjct: 381 DRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY----CFGTILRTCAGLAAVR 436
Query: 365 MGRMVHSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G+ VH IR G D V +ALVD+YAKC I A+ IF+ +++I WNS+I G
Sbjct: 437 QGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFA 496
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N + PD ++ + ++ AC+ G V G TK + +
Sbjct: 497 QNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGI 556
Query: 467 YVGTALLNFYAKCGDAQSARMVFDA--MREKNTVTWSAMIG 505
+ +++ + G + A ++ + R+ +++ W+A++G
Sbjct: 557 EHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSL-WAALLG 596
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 197/367 (53%), Gaps = 24/367 (6%)
Query: 59 CKSTGSLK---AFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C G LK FH +++ G +N + L+ M+G + AR +FD + PD +
Sbjct: 230 CSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICW 289
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEH----DNFVFSKVLKACCELRDIDEGMKVHC 170
+I ND + + + F+ M++ +H D F F VL AC L + +G +VH
Sbjct: 290 TSIISALTRNDFFDEALRFFYSMQR---DHGMCPDGFTFGTVLTACGNLGRLKQGKEVHA 346
Query: 171 EIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+++ G + V+ + LVDMY KC +G S+++FD KN VSW++++ GY QN +
Sbjct: 347 KVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKS 406
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ +F +M + + G+++ CA L A+ QGK +H ++ G + + +AL+D
Sbjct: 407 VIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVD 462
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+Y KCG I A+++FD++ +L++W +MI G+ Q+G ++AL++F P++++
Sbjct: 463 LYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYIS 522
Query: 350 IASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
+L A + G ++ GR M GI++G+E Y+ +VD+ + ++ +A +
Sbjct: 523 FIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYS---CMVDLLGRAGLLEEAEILI 579
Query: 405 ETTSEKD 411
ET+ +D
Sbjct: 580 ETSDFRD 586
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 140/272 (51%), Gaps = 22/272 (8%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+L C + G LK HA +I G N + LV MYG G V ++ +FD MP
Sbjct: 327 TVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIK 386
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ ++ Y N +K +++ ++ M K D + F +L+ C L + +G +VH
Sbjct: 387 NSVSWSALLGGYCQNGDFKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEVH 442
Query: 170 CEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
C+ ++ GG D V + LVD+YAKC I ++ +FD+ +N+++W SMI G+ QN +
Sbjct: 443 CQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGE 502
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-----WLHGYILKIGIEINSHL 283
E L +FN+M + ++ + I+ ++ AC+ + +G+ Y +K+GIE S +
Sbjct: 503 EALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCM 562
Query: 284 VTAL--------LDMYVKCGNIRDARSVFDEL 307
V L ++ ++ + RD S++ L
Sbjct: 563 VDLLGRAGLLEEAEILIETSDFRDDSSLWAAL 594
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 23/311 (7%)
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I+ +SG AL+L + V AS+L ++ N G +H+ I+ GL
Sbjct: 90 ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 149
Query: 379 E-DYTVINALVDMYAKCHV-IADARYIFETTSEKDVIAWNSIISG--------------- 421
E D V N+L+ +Y K + R +F+ KDVI+W S+ISG
Sbjct: 150 EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 209
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
L V P+A TL +VI AC+ LG +++G H +G SN + +AL++ + +
Sbjct: 210 KMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRG-FDSNYVIASALIDMHGRN 268
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTI 538
AR +FD + E + + W+++I +L F M + + P+ F T+
Sbjct: 269 CALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTV 328
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L+AC + G + +G K ++ F ++ +VD+ + G + E+ + MPI+
Sbjct: 329 LTACGNLGRLKQG-KEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKN 387
Query: 599 DVSLFGAFLHG 609
VS + A L G
Sbjct: 388 SVS-WSALLGG 397
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 189/545 (34%), Positives = 309/545 (56%), Gaps = 23/545 (4%)
Query: 151 KVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDK 209
K L+ C E + G +H +I+ G + L T L+ Y+K D S+R+VFD ++
Sbjct: 2 KSLQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPER 61
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
VVSW++ I+GY QN C Q+ L++F + +R GF + NQ T GS++ AC LR L +G +
Sbjct: 62 TVVSWSAQISGYSQNGCYQDALLVFLDMLRAGF-KANQFTYGSVLRACTGLRCLQRGMQI 120
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
G + K N + +ALLD++ KCG + DA +F + D+VSW A+I Y G+
Sbjct: 121 QGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFS 180
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-AL 387
+ ++F P+ T SVL AS ++ +H L I+LG + ++ +L
Sbjct: 181 GDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSL 240
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--DDNVSP----------------D 429
+D YAKC +A A ++++ KD+I+ ++++G D N S D
Sbjct: 241 IDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKID 300
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
V L S+ + CA++ ++ VG +HA + K + +V +G AL++ YAK G+ + A F
Sbjct: 301 DVILCSMFNICANISSLSVGRQIHALALKCKP-TYDVAMGNALIDMYAKSGEIKDANRAF 359
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+ M EKN ++W+++I GYG G G ++ALF M E ++PN++ F ++L AC+H G+ G
Sbjct: 360 NEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTG 419
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EGW+CF +M + +P +H+ CMVDL AR G LEEA + M I+P+ SL+GA L
Sbjct: 420 EGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGA 479
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C +Y L E + ++ P+ + YV+++++YA+ G W ++R+LM++R L K+P
Sbjct: 480 CYIYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAP 539
Query: 670 GCSLV 674
G S +
Sbjct: 540 GYSFI 544
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 254/550 (46%), Gaps = 43/550 (7%)
Query: 56 LGLCKSTGSLKAFHAL---LIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L LC T + K H + ++ +G +N +TKL+ Y G AR VFD MP
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH-C 170
S+ I Y N Y+D + + M + + + F + VL+AC LR + GM++ C
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123
Query: 171 EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
+ V + L+D+++KC + + +F +++VVSW ++I Y + +
Sbjct: 124 LEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDS 183
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+F M + + + T GS++ A + + +H I+++G + L +L+D
Sbjct: 184 FRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDA 243
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ-SGYPDKALKLFTDKKWADFFPNHVT 349
Y KC ++ A ++ + D++S TA++ GY + S Y KAL LF + + + V
Sbjct: 244 YAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVI 303
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+ S+ + A + +L++GR +H+L ++ D + NAL+DMYAK I DA F
Sbjct: 304 LCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEME 363
Query: 409 EKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG-S 450
EK+VI+W S+I+G + + P+ +T +S++ AC G G
Sbjct: 364 EKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWE 423
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGM 509
+ +K +L + + +++ +A+ G + A + + M K N W A++G +
Sbjct: 424 CFNNMISKYNILPRAEHF-SCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYI 482
Query: 510 QGD----GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM------- 558
G+ ++ LF ++ E N V+ I +A G WK M
Sbjct: 483 YGNMPLAEEAAIHLFK--MDPENSVNYVVLADIYAA---AGSWDNAWKMRKLMEERNLKK 537
Query: 559 CRDFKFVPSM 568
+ F+PS+
Sbjct: 538 APGYSFIPSI 547
>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
Length = 826
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 320/546 (58%), Gaps = 25/546 (4%)
Query: 162 IDEGMKVHC-EIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
+++ M+V C ++K+G V T L+ Y+ D+G ++F++T K++V W++M++
Sbjct: 104 LEDMMRVICGSVIKLGFESEVSVATALIGFYSD-YDMGIVWKIFNQTPIKDLVLWSAMVS 162
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
V++ E +F M+ VE N +++ S++ ACA + AL GK +HG+ +K
Sbjct: 163 ACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHP 222
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+++ +L+DMY KC N + + VFD++ DL+SWT +I G ++ P +A K F+ +
Sbjct: 223 LTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQ 282
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIA 398
++ F + + ++ A Q G H ++ GL + I AL+ MYAK +
Sbjct: 283 FSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELE 342
Query: 399 DARYIFETTSEKDVIAWNSIIS----------GLDD-------NVSPDAVTLVSVISACA 441
A +F+ ++KD I+W+++IS L+ + P+ +T VS++ AC+
Sbjct: 343 SAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACS 402
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+GA ++G S+ A++TK G LS N ++ +AL++ Y K G R +F+ + K+ V WS
Sbjct: 403 LIGAQELGESIQAHATKAGYLS-NAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWS 461
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
+MI GYG+ G G +L FS+ML V+PNEV+F ++LSACSH G+ EGW CF SM +
Sbjct: 462 SMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQK 521
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC-GLYSRFDLGE 620
+ +P + HY CMVDL++R G +E AL+F+ MP+EPD ++GA L GC + ++ E
Sbjct: 522 YGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAE 581
Query: 621 VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIAN 680
++ ++++ L P YYV++SNLYA GRW V ++R+L+ ++GL K G S+++ +
Sbjct: 582 LVAERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIEAQL-- 639
Query: 681 DFSFSR 686
DF R
Sbjct: 640 DFCLER 645
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 215/444 (48%), Gaps = 23/444 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+ Y + + +F+ P D + M+ + Y + E ++ M+ E
Sbjct: 128 TALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVE 186
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
++ +L AC + + G ++H I K+ P + V LVDMYAKCR+ +S V
Sbjct: 187 PNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLV 246
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD+ L+K+++SWT++I G ++NDC +E F+RM+ ++ + L+ A +
Sbjct: 247 FDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEH 306
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G HG++LK G+ + TALL MY K G + A VFD+L D +SW+AMI +
Sbjct: 307 KFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVH 366
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDY 381
S +P AL+ F + D PN +T S+L A + +G +G + + + G L +
Sbjct: 367 AHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNA 426
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
+ +AL+D+Y K I R IF KD++ W+S+I+G N
Sbjct: 427 FLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLAC 486
Query: 426 -VSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V P+ V +SV+SAC+ G G S + K G++ + +++ ++ G+ +
Sbjct: 487 GVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYA-CMVDLISRRGNIE 545
Query: 484 SARMVFDAMR-EKNTVTWSAMIGG 506
A + M E + W A++ G
Sbjct: 546 GALQFVNKMPMEPDKRIWGALLAG 569
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/421 (29%), Positives = 209/421 (49%), Gaps = 22/421 (5%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
NV+SWTS I+ V+ + ++ + LF M N +T+ S++ A + L + +
Sbjct: 53 NVISWTSKISSLVKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVIC 112
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
G ++K+G E + TAL+ Y ++ +F++ DLV W+AM+ +SG
Sbjct: 113 GSVIKLGFESEVSVATALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYG 171
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALV 388
+A ++F ++ PNHV+I S+L A A +G L G+ +H I+ T V N+LV
Sbjct: 172 EAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLV 231
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP-----------------DAV 431
DMYAKC + +F+ EKD+I+W +II G +N P D
Sbjct: 232 DMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADET 291
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
+ +I A + G + H + K GLL+ V +GTALL YAK G+ +SA +VFD
Sbjct: 292 IVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAF-VSIGTALLQMYAKFGELESAIIVFDQ 350
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+ +K+ ++WSAMI + +L F M + + +PNE+ F ++L ACS G G
Sbjct: 351 LNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELG 410
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCG 611
+ + ++ + ++DL + GR+ + +P + D+ + + ++G G
Sbjct: 411 -ESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTK-DLVCWSSMINGYG 468
Query: 612 L 612
L
Sbjct: 469 L 469
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 187/386 (48%), Gaps = 20/386 (5%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLI---VDGLTNDKCNTKLVSMYGSFGHVKYARSVF 103
+ +++L C + G+L K H I LTN + LV MY + K + VF
Sbjct: 190 VSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTN--VHNSLVDMYAKCRNFKASMLVF 247
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
D + D S+ +IR ND ++ + + M+ D + ++ A + +
Sbjct: 248 DQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHK 307
Query: 164 EGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
G+ H ++K G +FV G L+ MYAK ++ S+ VFD+ K+ +SW++MI+ +
Sbjct: 308 FGIAFHGFLLK-NGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVH 366
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
+ L F +M+ N+IT SL+ AC+ + A G+ + + K G N+
Sbjct: 367 AHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNA 426
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
L +AL+D+Y K G I R++F+E+ + DLV W++MI GY +G D+AL+ F++
Sbjct: 427 FLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLAC 486
Query: 342 DFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHV 396
PN V SVLSA + G + G M GI L Y +VD+ ++
Sbjct: 487 GVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYA---CMVDLISRRGN 543
Query: 397 IADA-RYIFETTSEKDVIAWNSIISG 421
I A +++ + E D W ++++G
Sbjct: 544 IEGALQFVNKMPMEPDKRIWGALLAG 569
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 319/557 (57%), Gaps = 20/557 (3%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKC-RDIGSSRQVFDE 205
+++ +L+ C ++ + G+++H ++K G D FV L+ +Y K D +R+VFD
Sbjct: 61 LYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDG 120
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
K+V+SWTSMI+GYV+ L LF +M VE N TL +++ AC++L L G
Sbjct: 121 LFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLG 180
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ HG +L G + N + +AL+DM+ + + DAR +FDEL D + WT++I T++
Sbjct: 181 RIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRN 240
Query: 326 GYPDKALKLF-TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+ D+AL+ F + ++ P+ T +VL+A LG L G+ VH+ I G V+
Sbjct: 241 DFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVV 300
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV--------- 434
++LVDMY KC + +++ IF+ K+ ++W++++ G N +V +
Sbjct: 301 ESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL 360
Query: 435 ----SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
+++ CA L AV+ G +H ++G +V V +AL++ YAKCG + A+ +FD
Sbjct: 361 YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWR-DVIVESALVDLYAKCGCIEYAQTIFD 419
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
M +N +TW++MIGG+ G G +L +F+ M+ E ++P+ + F IL ACSH G+V E
Sbjct: 420 QMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDE 479
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G + F SM +D+ ++HY CMVDLL RAG LEEA +E D SL+ A L C
Sbjct: 480 GREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGAC 539
Query: 611 GLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
+ +++ E + K+++EL PD YVL++N+Y + GRW ++R LMK RG++K PG
Sbjct: 540 TTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPG 599
Query: 671 CSLVDL--DIANDFSFS 685
S ++ ++ + F F
Sbjct: 600 KSWIETKNNLGSSFDFE 616
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 225/451 (49%), Gaps = 35/451 (7%)
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L L + G + + SL+ C K+ A + G +H +++K G+E + + +LL +
Sbjct: 44 LQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTL 103
Query: 291 YVKCG-NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
Y K G + + R VFD L D++SWT+MI GY + G P +L+LF PN T
Sbjct: 104 YFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFT 163
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+++V+ A ++LG+L +GR+ H + + G + +Y + +AL+DM+ + + DAR +F+
Sbjct: 164 LSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELL 223
Query: 409 EKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
E D I W SIIS L D + PD T +V++AC +LG ++ G
Sbjct: 224 EPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGK 283
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+HA G NV V ++L++ Y KCG ++ +FD M KN+V+WSA++GGY
Sbjct: 284 EVHAKVITTG-FCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQN 342
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
GD + +F M E+V + F TIL C+ V +G + R + +
Sbjct: 343 GDFKSVIQIFRKM--EKV--DLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVE 398
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDV---SLFGAFLHGCGLYSRFDLGEVMIKKML 627
+VDL A+ G +E A + MP+ + S+ G F + M+K+ +
Sbjct: 399 SA-LVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGI 457
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
+ PD Y + L+A R + V++ RE
Sbjct: 458 K--PD---YISFIGILFACSHRGL-VDEGRE 482
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 229/461 (49%), Gaps = 29/461 (6%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFG-HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA +I GL D+ L+++Y G R VFD + D S+ MI Y
Sbjct: 82 HAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGK 141
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TG 185
+ +E + M E + F S V+KAC EL D+ G H ++ G ++V+ +
Sbjct: 142 PMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASA 201
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEG 244
L+DM+ + + +RQ+FDE L+ + + WTS+I+ +ND E L F M R+ +
Sbjct: 202 LIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCP 261
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ T G+++TAC L L QGK +H ++ G N + ++L+DMY KCG++ +++ +F
Sbjct: 262 DGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIF 321
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + + VSW+A++ GY Q+G +++F + D + ++L A L +
Sbjct: 322 DRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY----CFGTILRTCAGLAAVR 377
Query: 365 MGRMVHSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G+ VH IR G D V +ALVD+YAKC I A+ IF+ +++I WNS+I G
Sbjct: 378 QGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFA 437
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N + PD ++ + ++ AC+ G V G TK + +
Sbjct: 438 QNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGI 497
Query: 467 YVGTALLNFYAKCGDAQSARMVFDA--MREKNTVTWSAMIG 505
+ +++ + G + A ++ + R+ +++ W+A++G
Sbjct: 498 EHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSL-WAALLG 537
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 197/367 (53%), Gaps = 24/367 (6%)
Query: 59 CKSTGSLK---AFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C G LK FH +++ G +N + L+ M+G + AR +FD + PD +
Sbjct: 171 CSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHGRNCALDDARQLFDELLEPDAICW 230
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEH----DNFVFSKVLKACCELRDIDEGMKVHC 170
+I ND + + + F+ M++ +H D F F VL AC L + +G +VH
Sbjct: 231 TSIISALTRNDFFDEALRFFYSMQR---DHGMCPDGFTFGTVLTACGNLGRLKQGKEVHA 287
Query: 171 EIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+++ G + V+ + LVDMY KC +G S+++FD KN VSW++++ GY QN +
Sbjct: 288 KVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKS 347
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ +F +M + + G+++ CA L A+ QGK +H ++ G + + +AL+D
Sbjct: 348 VIQIFRKME----KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRDVIVESALVD 403
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+Y KCG I A+++FD++ +L++W +MI G+ Q+G ++AL++F P++++
Sbjct: 404 LYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYIS 463
Query: 350 IASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
+L A + G ++ GR M GI++G+E Y+ +VD+ + ++ +A +
Sbjct: 464 FIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYS---CMVDLLGRAGLLEEAEILI 520
Query: 405 ETTSEKD 411
ET+ +D
Sbjct: 521 ETSDFRD 527
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 140/272 (51%), Gaps = 22/272 (8%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+L C + G LK HA +I G N + LV MYG G V ++ +FD MP
Sbjct: 268 TVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIK 327
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ ++ Y N +K +++ ++ M K D + F +L+ C L + +G +VH
Sbjct: 328 NSVSWSALLGGYCQNGDFKSVIQIFRKMEKV----DLYCFGTILRTCAGLAAVRQGKEVH 383
Query: 170 CEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
C+ ++ GG D V + LVD+YAKC I ++ +FD+ +N+++W SMI G+ QN +
Sbjct: 384 CQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGE 443
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-----WLHGYILKIGIEINSHL 283
E L +FN+M + ++ + I+ ++ AC+ + +G+ Y +K+GIE S +
Sbjct: 444 EALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHYSCM 503
Query: 284 VTAL--------LDMYVKCGNIRDARSVFDEL 307
V L ++ ++ + RD S++ L
Sbjct: 504 VDLLGRAGLLEEAEILIETSDFRDDSSLWAAL 535
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 23/311 (7%)
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I+ +SG AL+L + V AS+L ++ N G +H+ I+ GL
Sbjct: 31 ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGL 90
Query: 379 E-DYTVINALVDMYAKCHV-IADARYIFETTSEKDVIAWNSIISG--------------- 421
E D V N+L+ +Y K + R +F+ KDVI+W S+ISG
Sbjct: 91 EFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFW 150
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
L V P+A TL +VI AC+ LG +++G H +G SN + +AL++ + +
Sbjct: 151 KMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRG-FDSNYVIASALIDMHGRN 209
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTI 538
AR +FD + E + + W+++I +L F M + + P+ F T+
Sbjct: 210 CALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPDGFTFGTV 269
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L+AC + G + +G K ++ F ++ +VD+ + G + E+ + MPI+
Sbjct: 270 LTACGNLGRLKQG-KEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKN 328
Query: 599 DVSLFGAFLHG 609
VS + A L G
Sbjct: 329 SVS-WSALLGG 338
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 210/618 (33%), Positives = 333/618 (53%), Gaps = 29/618 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+T L+ +Y G V YA + FD MP D S+ +I Y N +E + M K
Sbjct: 480 STALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLKLGF 539
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
+L +C +L + +G +H +K G D V L MYAKC D+ ++
Sbjct: 540 CPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEY 599
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F+E +DK+VVSW +MI Y QN E + +F RM VE +Q+T+ SL +A A +
Sbjct: 600 LFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANANPES 659
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+H Y +K+G+ ++ +VT+L+ MY + G+ A ++ L +LVS TA+I
Sbjct: 660 IH------CYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITS 713
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Y ++G ++ F+ + P+ V + S+L A ++ +G + H I+ GL+ +
Sbjct: 714 YAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTF 773
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD---------------- 424
++ N L+ MY+K + + +F EK +I+WNS+ISG
Sbjct: 774 NLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKM 833
Query: 425 -NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+PDA+T+ S++S C+ LG +Q G LH+Y + L + +VGTAL++ Y KCG
Sbjct: 834 HGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRNKLEMED-FVGTALIHMYTKCGSIV 892
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A VF ++ + TW+AMI GY G +L +S+M + V+P+++ F +L+AC+
Sbjct: 893 HAERVFKSIGKPCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACT 952
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G++ EG + F M + + VP+++H CMV LLAR G EEAL F++NM EPD +++
Sbjct: 953 HGGLIHEGRRYFQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDSAVW 1012
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
GAFL C ++ LGE + KK+ L YVL+SNLYA GRW V +VRE+MK
Sbjct: 1013 GAFLSACCIHQEVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTGRWDDVARVREMMKDA 1072
Query: 664 GLSKSPGCSLVDLDIAND 681
G + G L+ ++ND
Sbjct: 1073 GGDGNSGWKLL---MSND 1087
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 182/398 (45%), Gaps = 46/398 (11%)
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+ +++K GI+ ++ TALLD+Y+K G + A + FD + D+VSW A+I GY+++GY
Sbjct: 464 IQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGY 523
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
AL+LF F P T+ +L + QL + G+ +H GI+ GL D V NA
Sbjct: 524 DFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNA 583
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV--SVISACASLG 444
L MYAKC + A Y+FE +K V++WN++I N D V +I A +
Sbjct: 584 LTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVS 643
Query: 445 AVQVGS---------SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V + S S+H Y+ K G L+ + V T+L+ YA+ G A +++ ++ +K
Sbjct: 644 QVTIMSLPSANANPESIHCYTIKVG-LADDASVVTSLICMYARYGSTDHAELLYWSLPQK 702
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-----------H 544
N V+ +A+I Y G+ G + FS M ++P+ V +IL + H
Sbjct: 703 NLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFH 762
Query: 545 TGMVGEGWKCF-------YSMCRDFKFVPS------------MKHYVCMVDLLARAGRLE 585
+ G F SM F V + + + ++ +AGR
Sbjct: 763 GYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRAS 822
Query: 586 EALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGE 620
A+E M + PD + L GC GE
Sbjct: 823 HAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQFGE 860
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
A+ A+Q+ + L K+G+ VYV TALL+ Y K G A FD M ++ V+W
Sbjct: 457 ANTEAIQIQNHL----IKRGI-DQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSW 511
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMC 559
+A+I GY G +L LF ML P + +L +C +V +G + +
Sbjct: 512 NALICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIK 571
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
P +K+ + + A+ G LE A E M ++ V + + G FD
Sbjct: 572 SGLHLDPQVKN--ALTSMYAKCGDLEAAEYLFEEM-MDKSVVSWNTMIGAYGQNGFFDEA 628
Query: 620 EVMIKKML 627
+ K+M+
Sbjct: 629 MFVFKRMI 636
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 333/628 (53%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L++ G D + L+ MY + + +F +P ++ + +I ND +
Sbjct: 199 HGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEH 258
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+E +K M+K +++ V ++C L + G ++H +K G D V T
Sbjct: 259 ILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTAT 318
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMYAKC + ++++F+ ++ + ++I G V+N+ E L F + + + N+
Sbjct: 319 LDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNE 378
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
I+L +ACA ++ G+ LH +K + N + ++LDMY KC + +A +FDE
Sbjct: 379 ISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDE 438
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I + Q+G ++ L LF P+ T SVL A + LN G
Sbjct: 439 MERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSG 498
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+H+ I+ GL D V AL+DMY KC +I +A+ I + ++ +++WN+II+G
Sbjct: 499 MEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLL 558
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
L +V PD T V+ ACA+L +V +G +H K L S+VY+
Sbjct: 559 KHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLEL-HSDVYI 617
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+ L++ Y+KCG+ Q + +VF+ K+ VTW+AMI GY G G +L F M E V
Sbjct: 618 TSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENV 677
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN F +IL AC+H G + +G F +M ++ P ++HY CM+D++ R+GR+ EAL
Sbjct: 678 RPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEAL 737
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+ ++ MP E D ++ L C ++ ++ E +L+L P+ + +L+SN+YA G
Sbjct: 738 KLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAG 797
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
W +V+++R++M+ L K PGCS +++
Sbjct: 798 MWGKVSEMRKMMRYNKLKKEPGCSWIEV 825
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 208/737 (28%), Positives = 340/737 (46%), Gaps = 110/737 (14%)
Query: 21 LRFFSYTNQQTPTQHE--LDQTFASFHSLPSIPCLNLLGLCKSTGSLKA---FHALLIVD 75
LR F++ T Q++ L +F +++ C SLK HA +IV
Sbjct: 21 LRIFTFCTISTLQQNQTKLPTKIRTFS--------HIIQECSDYNSLKPGKQAHARMIVS 72
Query: 76 GLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY------------F 122
G D + L+ MY H+ YA VF+ M D S+ MI Y F
Sbjct: 73 GFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFF 132
Query: 123 LNDLYKDIVEFYKCMRKRLKE--------------------HDNFVFSKVLKACCELRDI 162
+ +D+V + + L+ D F+ VLKAC L D
Sbjct: 133 YDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDG 192
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
G++VH IV++G D + L+DMYAKC+ + S ++F E KN V W+++IAG
Sbjct: 193 GLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGC 252
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
VQND GL LF M++ + +Q S+ +CA L AL G LH + LK +
Sbjct: 253 VQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDI 312
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ TA LDMY KCG++ DA+ +F+ L L + A+IVG ++ +AL+ F +
Sbjct: 313 TVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKS 372
Query: 342 DFFPNHVTIASVLSASAQL-GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
N ++++ SA A + G+L+ GR +HSL ++ L + V N+++DMY KC +++
Sbjct: 373 GLGFNEISLSGAFSACASIKGDLD-GRQLHSLSVKSTLRSNICVANSILDMYGKCEALSE 431
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACAS 442
A +F+ +D ++WN++I+ + N + PD T SV+ AC+S
Sbjct: 432 ACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSS 491
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
A+ G +H K G L + +VG AL++ Y KCG + A+ + D + ++ V+W+A
Sbjct: 492 QQALNSGMEIHNRIIKSG-LGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNA 550
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC-------- 554
+I G+ + + + F +ML V+P+ + +L AC++ VG G +
Sbjct: 551 IIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLE 610
Query: 555 -------------FYSMCRD-------FKFVPSMKHYV---CMVDLLARAGRLEEALEFM 591
YS C + F+ P+ K +V M+ A+ G EEAL +
Sbjct: 611 LHSDVYITSTLVDMYSKCGNMQDSALVFEKAPN-KDFVTWNAMICGYAQHGLGEEALGYF 669
Query: 592 ENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE---LHPDKACYYVLVSNLYA 645
E M +E P+ + F + L C D G ML L P Y ++ +
Sbjct: 670 ERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDII-- 727
Query: 646 SDGRWIRVNQVRELMKQ 662
GR R+++ +L+++
Sbjct: 728 --GRSGRISEALKLIQE 742
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/565 (32%), Positives = 318/565 (56%), Gaps = 56/565 (9%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVD---MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H +++K G ++ + L+ L++ + + + VF+ + N++ W +M G+
Sbjct: 21 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ L L+ M + N T L+ +CAK +A +G+ +HG++LK+G +++ ++
Sbjct: 81 SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 140
Query: 284 VTALLDMYVKCGNIRDARSVFD-------------------------------ELCSIDL 312
T+L+ MYV+ G + DAR VFD E+ D+
Sbjct: 141 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 200
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW AMI GY ++G +AL+LF + + P+ T+ SV+SA AQ ++ +GR VHS
Sbjct: 201 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 260
Query: 373 GIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
G + ++NAL+D+Y KC + A +FE S KDVI+WN++I G
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK--QGLLSSNVYVGTAL 472
L SP+ VT++S++ ACA LGA+++G +H Y K +G+ +++ + T+L
Sbjct: 321 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH-RTSL 379
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
++ YAKCGD ++A+ VFD++ ++ +W+AMI G+ M G + +FS M E++P++
Sbjct: 380 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 439
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
+ F +LSACSH+GM+ G F SM D+K P ++HY CM+DLL +G +EA E +
Sbjct: 440 ITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 499
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
M +EPD ++ + L C +Y+ +LGE + ++++ P YVL+SN+YA+ GRW
Sbjct: 500 TMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNE 559
Query: 653 VNQVRELMKQRGLSKSPGCSLVDLD 677
V ++R L+ +G+ K PGCS +++D
Sbjct: 560 VAKIRALLNDKGMKKVPGCSSIEID 584
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 168/599 (28%), Positives = 277/599 (46%), Gaps = 106/599 (17%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTN-DKCNTKLVS---MYGSFGHVKYARSVFDSM 106
P L+LL CK+ SL+ HA +I GL N + +KL+ + F + YA SVF+++
Sbjct: 4 PSLSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETI 63
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P+ + M R + L+ + Y CM + + F +LK+C + + EG
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQ 123
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKC---------------RD--------------- 195
++H ++K+G D +V T L+ MY + RD
Sbjct: 124 QIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKG 183
Query: 196 -IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
I S++++FDE K+VVSW +MI+GY + +E L LF M + V ++ T+ S+V+
Sbjct: 184 YIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVS 243
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
ACA+ ++ G+ +H +I G N +V AL+D+Y+KCG + A +F+ L D++S
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVIS 303
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W +I GYT +AL LF + + PN VT+ S+L A A LG + +GR +H +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH---V 360
Query: 375 RLGLEDYTVINA------LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------ 422
+ V NA L+DMYAKC I A+ +F++ + + +WN++I G
Sbjct: 361 YINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRA 420
Query: 423 -----------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+ + PD +T V ++SAC+ G + +G
Sbjct: 421 NAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLG---------------------- 458
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF---SDMLNE-E 527
R +F +M+E +T + YG D G LF +M+N E
Sbjct: 459 --------------RHIFRSMKEDYKIT--PKLEHYGCMIDLLGHSGLFKEAEEMINTME 502
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
++P+ VI+ ++L AC V G ++ + P YV + ++ A AGR E
Sbjct: 503 MEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPG--SYVLLSNIYATAGRWNE 559
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 222/706 (31%), Positives = 341/706 (48%), Gaps = 101/706 (14%)
Query: 66 KAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI---- 118
+ HA ++ +G N+ TKLV Y + A +F + + +S+ ++
Sbjct: 1194 QQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQC 1253
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
R F D +E M++ DNFV VLKAC L+ I G VH ++K+G G
Sbjct: 1254 RMGFSEDALLGFIE----MQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFG 1309
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
FV + LVDMY KC + +R+VFD ++KNVV+W SMI GYVQN QE + +F M
Sbjct: 1310 ACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDM 1369
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R +E ++T+ S ++A A L AL +GK H + +++++ L +++++ Y K G I
Sbjct: 1370 RVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLI 1429
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
DA VF + D+V+W +I Y Q KAL + + + + VT++S+LSAS
Sbjct: 1430 EDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSAS 1489
Query: 358 AQLGNLNMGRMVHSLGIRLGLE--------------------------------DYTVIN 385
A N+ +G+ H IR LE D + N
Sbjct: 1490 AVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWN 1549
Query: 386 ALVDMYAKCHVIADARYIFET----TSEKDVIAWNSIISGLDDN---------------- 425
L+ YA+ + +A +F + +VI+WNS+I G N
Sbjct: 1550 TLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSL 1609
Query: 426 ------------------------------------VSPDAVTLVSVISACASLGAVQVG 449
+ P ++ SV+ AC + ++ G
Sbjct: 1610 GFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYG 1669
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
++H + T+ S V V T+L++ YAKCG A+ VF M K ++AMI Y +
Sbjct: 1670 RAIHGFITRHEFCLS-VPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYAL 1728
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G +LALF + E ++P+ + FT+ILSACSH G+V EG F M P M+
Sbjct: 1729 HGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIME 1788
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY C+V LL+R G L+EAL + MP +PD + G+ L C + +LGE + K + +L
Sbjct: 1789 HYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKL 1848
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
P + YV +SN YA+ GRW+ V+ +R+LMK RGL K+PGCS +
Sbjct: 1849 EPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQ 1894
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 256/487 (52%), Gaps = 26/487 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C R + G ++H I+K G + +V T LV YAKC + ++F
Sbjct: 1176 IYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFH 1235
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+NV SW +++ + +++ L+ F M+E V + L +++ AC L+ +
Sbjct: 1236 RLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGL 1295
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +HGY+LK+G + ++L+DMY KCG + DAR VFD + ++V+W +MIVGY Q
Sbjct: 1296 GKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQ 1355
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +A+ +F D + P VT+AS LSASA L L G+ H++ I L+ D +
Sbjct: 1356 NGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNIL 1415
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
+++++ Y+K +I DA +F EKDV+ WN +IS +N+
Sbjct: 1416 GSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENL 1475
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D+VTL S++SA A +++G H Y ++ L S+V V ++++ YAKC AR
Sbjct: 1476 RFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRN-LESDVVVANSIIDMYAKCERIDDAR 1534
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD+ E++ V W+ ++ Y G G +L LF M + V PN + + +++ G
Sbjct: 1535 KVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNG 1594
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLF 603
V E K +S + F P++ + ++ LA++G EA+ F + M I P ++
Sbjct: 1595 QVNEA-KDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASI 1653
Query: 604 GAFLHGC 610
+ L C
Sbjct: 1654 TSVLLAC 1660
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/645 (31%), Positives = 330/645 (51%), Gaps = 27/645 (4%)
Query: 58 LCKSTGSLK------AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L KS G L HAL + GL D + + LV MYG + A F M +
Sbjct: 157 LLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERN 216
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ I N+ Y +E + M++ ++ ++C + + ++H
Sbjct: 217 SVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHA 276
Query: 171 EIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+K V D V T +VD+YAK ++ +R+ F NV + +M+ G V+ E
Sbjct: 277 HAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAE 336
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ LF M V + I+L + +ACA+++ QG +H +K G +++ + A+LD
Sbjct: 337 AMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILD 396
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+Y KC + +A VF E+ D VSW A+I Q+ + + + + P+ T
Sbjct: 397 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFT 456
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
SVL A A L +L G +VH I+ GL D V + +VDMY KC I +A+ + +
Sbjct: 457 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIG 516
Query: 409 EKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSS 451
+++++WNSIISG LD V PD T +V+ CA+L +++G
Sbjct: 517 GQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQ 576
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+H KQ +L Y+ + L++ YAKCG+ + ++F+ R+ + V+W+AMI GY + G
Sbjct: 577 IHGQIIKQEMLGDE-YISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHG 635
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G +L +F M V PN F +L ACSH G++ +G + F+ M +K VP ++H+
Sbjct: 636 QGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHF 695
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CMVD+L R+ +EALEF+ +MPIE D ++ L C + ++ E +L L P
Sbjct: 696 ACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDP 755
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
D A Y+L+SN+YA G+W+ V++ R LM+Q L K PGCS +++
Sbjct: 756 DDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEV 800
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 155/557 (27%), Positives = 280/557 (50%), Gaps = 34/557 (6%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
NT L + Y G A S+F +MP+PD S+ +I Y + ++++ V M +R
Sbjct: 89 NTMLTA-YVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGV 147
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D + +LK+C L D+ G+++H VK G D + LVDMY KCR + + +
Sbjct: 148 ALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALR 207
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
F ++N VSW + IAG VQN+ G+ LF +M+ + +Q S +CA +
Sbjct: 208 FFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPC 267
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L + LH + +K + + TA++D+Y K GN+ DAR F L ++ + AM+VG
Sbjct: 268 LSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVG 327
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
++G +A++LF + + ++++ V SA A++ G VH L ++ G + D
Sbjct: 328 LVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVD 387
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V NA++D+Y KC + +A +F+ ++D ++WN+II+ L+ N
Sbjct: 388 VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLR 447
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ PD T SV+ ACA L +++ G +H + K G L + +V + +++ Y KCG
Sbjct: 448 SGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSG-LGLDAFVSSTVVDMYCKCGAIT 506
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A+ + D + + V+W+++I G+ + + FS+ML+ V+P+ + T+L C+
Sbjct: 507 EAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCA 566
Query: 544 HTGMVGEGWKCFYSMCRDF----KFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---- 595
+ + G + + + +++ S +VD+ A+ G + ++L E
Sbjct: 567 NLATIELGKQIHGQIIKQEMLGDEYISST-----LVDMYAKCGNMPDSLLMFEKARKLDF 621
Query: 596 IEPDVSLFGAFLHGCGL 612
+ + + G LHG GL
Sbjct: 622 VSWNAMICGYALHGQGL 638
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/533 (25%), Positives = 233/533 (43%), Gaps = 65/533 (12%)
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD-----ETL----------- 207
G H ++ G P +FV L+ MYA+C + VFD +T+
Sbjct: 38 GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLTAYVH 97
Query: 208 ---------------DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
D +VVSW ++I+GY Q+ + + L M V ++ TL L
Sbjct: 98 AGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVL 157
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
+ +C L L G +H +K G+E + +AL+DMY KC ++ DA F + +
Sbjct: 158 LKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNS 217
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW A I G Q+ + ++LF + + AS + A + L+ R +H+
Sbjct: 218 VSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAH 277
Query: 373 GIR-LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
I+ + D V A+VD+YAK + DAR F +V N+++ GL
Sbjct: 278 AIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEA 337
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
V D ++L V SACA + G +H + K G +V V A+L+
Sbjct: 338 MQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSG-FDVDVCVRNAILD 396
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y KC A +VF M ++++V+W+A+I ++A ++ML ++P++
Sbjct: 397 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFT 456
Query: 535 FTTILSACS-----HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
+ ++L AC+ G+V G + D FV S +VD+ + G + EA +
Sbjct: 457 YGSVLKACAGLQSLEYGLVVHGKAIKSGLGLD-AFVSST-----VVDMYCKCGAITEAQK 510
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL--HPDKACYYVLV 640
+ + + VS + + + G L + + + +ML++ PD Y ++
Sbjct: 511 LHDRIGGQELVS-WNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVL 562
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 148/353 (41%), Gaps = 50/353 (14%)
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
GFV + + A A AL G+ H +L G + + LL MY +CG
Sbjct: 13 GFVATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAH 72
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD---------------FF 344
A VFD + D VSW M+ Y +G D A LF D F
Sbjct: 73 AHGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMF 132
Query: 345 PNHV----------------TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINAL 387
N V T+A +L + L +L +G +H+L ++ GLE D +AL
Sbjct: 133 RNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSAL 192
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDA 430
VDMY KC + DA F E++ ++W + I+G N +
Sbjct: 193 VDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQ 252
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
S +CA++ + LHA++ K + SS+ VGTA+++ YAK G+ AR F
Sbjct: 253 PAYASAFRSCAAMPCLSTARQLHAHAIKN-VFSSDRVVGTAIVDVYAKAGNLVDARRAFI 311
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ N T +AM+ G G G ++ LF M V + + + + SAC+
Sbjct: 312 GLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACA 364
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 114/291 (39%), Gaps = 51/291 (17%)
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEK-- 410
L ASA L G+ H+ + G T + N L+ MYA+C A A +F+T +
Sbjct: 26 LCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDT 85
Query: 411 -----------------------------DVIAWNSIISGL-----------------DD 424
DV++WN++ISG
Sbjct: 86 VSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRR 145
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V+ D TL ++ +C L + +G +HA + K G L ++V G+AL++ Y KC
Sbjct: 146 GVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTG-LETDVRAGSALVDMYGKCRSLDD 204
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A F M E+N+V+W A I G + LF M + ++ + + +C+
Sbjct: 205 ALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAA 264
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+ + ++ F +VD+ A+AG L +A +P
Sbjct: 265 MPCLSTARQLHAHAIKNV-FSSDRVVGTAIVDVYAKAGNLVDARRAFIGLP 314
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 354/641 (55%), Gaps = 22/641 (3%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFL 123
K H+ ++ + L D T L+ Y G AR +F + + + ++ VMI +
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGE 218
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
N L+++ +E+Y + + + F+ L AC + + G +VHC+ +KVG D +V
Sbjct: 219 NGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYV 278
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+ MY KC+ I S+ +VF+E DK + W ++I+ YV N A + L ++ +M+ V
Sbjct: 279 HTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTV 338
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ T+ +++T+ + G+ +H I+K ++ + + +ALL MY K G+ A S
Sbjct: 339 LSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANS 398
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F + D+V+W ++I G+ Q+ +AL F + P+ +AS++SA L
Sbjct: 399 IFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEK 458
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+++G +H I+ GL+ D V ++L+DMY+K A IF K+++AWNSIIS
Sbjct: 459 VDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISC 518
Query: 422 -----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
L +++ PD+V+ SV++A +S+ A+ G S+H Y + +
Sbjct: 519 YCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRL-WIPF 577
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
++ V L++ Y KCG + A+ +F+ + EKN V W++MIGGYG G+ ++ LF +M
Sbjct: 578 DLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMR 637
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ ++P++V F ++LS+C+H+G++ EG F M F P M+HYV +VDL RAG L
Sbjct: 638 SSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCL 697
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+A F++NMP+EPD S++ + L C ++ +LGE++ K+L + P K YV + NLY
Sbjct: 698 GDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNYVQLLNLY 757
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
W R +R MK++GL K+PGCS +++ D +S
Sbjct: 758 GEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYS 798
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 238/503 (47%), Gaps = 63/503 (12%)
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ +E K K F + +LKAC L ++ G +H I+ G D ++ + L
Sbjct: 35 RQYIEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSL 94
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVS------WTSMIAGYVQNDCAQEGLVLFNRMR-E 239
+++Y KC + +VFD+ L K+ VS W S+I GY + +EG+V F RM+
Sbjct: 95 INIYVKCGTFTDAVKVFDQ-LPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSS 153
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
G+ EG QI H YI++ + + L TAL+D Y KCG +
Sbjct: 154 GYKEGKQI---------------------HSYIVRNMLNFDPFLETALIDTYFKCGRPTE 192
Query: 300 ARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
AR +F +L ++V+W MI G+ ++G + +L+ + K + + LSA
Sbjct: 193 ARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACG 252
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
Q ++ G+ VH I++G ED ++ +L+ MY KC +I A +F +K++ WN+
Sbjct: 253 QGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNA 312
Query: 418 IISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+IS N V D+ T+++V+++ + G +G +H K+
Sbjct: 313 LISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRP 372
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
L SS + + +ALL Y+K GD+ A +F M+E++ V W ++I G+ +L F
Sbjct: 373 LQSS-ITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFF 431
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP----SMKHYVC--M 574
M + V+P+ I +I+SAC+ V G C FV + +V +
Sbjct: 432 RAMEADLVKPDSDIMASIISACTGLEKVDLG-------CTIHGFVIKSGLQLDVFVASSL 484
Query: 575 VDLLARAGRLEEALEFMENMPIE 597
+D+ ++ G E A +MP++
Sbjct: 485 LDMYSKFGFPERAGNIFSDMPLK 507
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 192/459 (41%), Gaps = 81/459 (17%)
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
I VQ E L L+ + V + T SL+ ACA L L GK +H I+ G+
Sbjct: 28 IKSLVQQRQYIEALKLYTKSP---VYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDEL----CSIDLVS-WTAMIVGYTQSGYPDKAL 332
+ ++ ++L+++YVKCG DA VFD+L S+D V+ W ++I GY + G ++ +
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMY 391
F Q G+ +HS +R L D + AL+D Y
Sbjct: 145 VQF--------------------GRMQSSGYKEGKQIHSYIVRNMLNFDPFLETALIDTY 184
Query: 392 AKCHVIADARYIFETTSEK-DVIAWNSIISGLDDN------------VSPDAVTLVS--- 435
KC +ARY+F+ ++ +++AWN +I G +N + V +VS
Sbjct: 185 FKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSF 244
Query: 436 --VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+SAC V G +H + K G + YV T+LL Y KC +SA VF+ +
Sbjct: 245 TCTLSACGQGEFVSFGKQVHCDAIKVG-FEDDPYVHTSLLTMYGKCQMIESAEKVFNEVP 303
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM------ 547
+K W+A+I Y G +L ++ M V + +L++ S G+
Sbjct: 304 DKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRL 363
Query: 548 ---------------VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA---------RAGR 583
+ YS D + S+ + D++A + +
Sbjct: 364 IHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRK 423
Query: 584 LEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLG 619
+EAL+F M ++PD + + + C + DLG
Sbjct: 424 YKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLG 462
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 202/628 (32%), Positives = 332/628 (52%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L++ G D + L+ MY + + SVF +P ++ S+ MI ND
Sbjct: 204 HGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRN 263
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ +E +K M+ +++ + ++C L + G ++H +K G D V T
Sbjct: 264 VEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTAT 323
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMYAKC + +++V ++ S+ ++I GY ++D + L F + + + ++
Sbjct: 324 LDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDE 383
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
ITL + ACA +R +G+ +HG +K N + A+LDMY KC + +A +FD
Sbjct: 384 ITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDM 443
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I Q+G ++ L F + P+ T SVL A A LN G
Sbjct: 444 MERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTG 503
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+H+ I+ G+ D V ALVDMY KC +I A I + T +K +++WN+IISG
Sbjct: 504 MEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLL 563
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
L+ V+PD T +V+ CA+L V +G +HA KQ L S+VY+
Sbjct: 564 QQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQEL-QSDVYI 622
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+ L++ Y+KCG+ Q ++++F+ ++ VTW+AM+ GY G G +L LF M V
Sbjct: 623 CSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNV 682
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN F ++L AC+H G+V +G F M ++ P +HY CMVD+L R+GR++EAL
Sbjct: 683 KPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEAL 742
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
++ MP E D ++ L C ++ ++ E + +L+L P + VL+SN+YA G
Sbjct: 743 NLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAG 802
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
W V+++R++M+ L K PGCS ++L
Sbjct: 803 MWGNVSEMRKMMRHNKLKKEPGCSWIEL 830
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 317/665 (47%), Gaps = 63/665 (9%)
Query: 16 KPKLQLRFFSYTNQQTPTQHELD--------QTFASFHSLP---------SIPCLNLLGL 58
+P ++R FS+ Q+ Q+ L+ F F I CL L
Sbjct: 44 QPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYA 103
Query: 59 CKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
CK F + + D ++ + ++S Y S G + AR F MP D S+ +I
Sbjct: 104 CK------VFDKMYLRDVVSYNS----IISGYASCGEMDIARKFFYEMPERDVVSWNSVI 153
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP 178
+ N + ++ + M + D + VLKAC L + D G++VH +VK G
Sbjct: 154 SGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGF- 212
Query: 179 DSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D V+TG L+ MYAKC+ + S VF E +KN VSW++MIAG VQND EGL LF
Sbjct: 213 DCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKE 272
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M+ V +Q SL +CA L AL GK LH + LK + + TA LDMY KCG
Sbjct: 273 MQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGR 332
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ DA+ V + L S+ A+IVGY +S +ALK F + +T++ L+A
Sbjct: 333 MADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNA 392
Query: 357 SAQLGNLNMGRMVHSLGIR-LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
A + GR VH L ++ + + + V NA++DMY KC +A+A +F+ +D ++W
Sbjct: 393 CASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSW 452
Query: 416 NSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
N+II+ + N + PD T SV+ ACA A+ G +H K
Sbjct: 453 NAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIK 512
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G + + +VG AL++ Y KCG + A + D +K V+W+A+I G+ + +
Sbjct: 513 SG-MGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHK 571
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVD 576
FS ML V P+ + +L C++ VG G + + K Y+C +VD
Sbjct: 572 FFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQI---IKQELQSDVYICSTLVD 628
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK-----KMLELHP 631
+ ++ G ++++ E P D + A L CG Y+ LGE +K +++ + P
Sbjct: 629 MYSKCGNMQDSQLMFEKAP-NRDFVTWNAML--CG-YAHHGLGEEALKLFESMQLVNVKP 684
Query: 632 DKACY 636
+ A +
Sbjct: 685 NHATF 689
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 211/618 (34%), Positives = 338/618 (54%), Gaps = 37/618 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L+++Y G V AR+VFD M D S+ M N ++ + M +
Sbjct: 90 LLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGLLP 149
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIV--------KVG--GPDSFVLTGLVDMYAKCR 194
+ + V AC +++C + K+G G D V + L+DM A+
Sbjct: 150 NAYTLCAVAHACFP-------HELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNG 202
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
D+ S+R+VFD ++K VV WT +I+ YVQ +CA+E + +F E E ++ T+ S+++
Sbjct: 203 DLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMIS 262
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA----RSVFDELCSI 310
AC +L ++ G LH L++G ++ + L+DMY K NI A VF+ +
Sbjct: 263 ACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK-SNIEQAMDYANKVFERMRKN 321
Query: 311 DLVSWTAMIVGYTQSGYPD-KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
D++SWTA+I GY QSG + K + LF + PNH+T +S+L A A + + + GR V
Sbjct: 322 DVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQV 381
Query: 370 HSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD---- 424
H+ I+ +TV NALV MYA+ + +AR +F E+ +I+ I G D
Sbjct: 382 HAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIS--CITEGRDAPLDH 439
Query: 425 -----NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
++ + T S+ISA AS+G + G LHA + K G S+ +V +L++ Y++C
Sbjct: 440 RIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGF-GSDRFVSNSLVSMYSRC 498
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G + A F+ ++++N ++W++MI G G +L+LF DM+ V+PN+V + +L
Sbjct: 499 GYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVL 558
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACSH G+V EG + F SM RD +P M+HY CMVDLLAR+G ++EALEF+ MP++ D
Sbjct: 559 SACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEFINEMPLKAD 618
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
++ L C + ++GE+ K ++EL P YVL+SNLYA G W V ++R
Sbjct: 619 ALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLWDEVARIRSA 678
Query: 660 MKQRGLSKSPGCSLVDLD 677
M+ L+K G S ++++
Sbjct: 679 MRDNNLNKETGLSWMEVE 696
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 140/540 (25%), Positives = 244/540 (45%), Gaps = 91/540 (16%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D+ V L+ +Y++C + S+R VFD +++VSWT+M + +N +E L+L M
Sbjct: 83 DAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEM 142
Query: 238 REGFVEGNQITLGSLVTAC-----------AKLRALHQ-GKWLHGYILKIGIEINSHLVT 285
E + N TL ++ AC L +H+ G W G + +G +
Sbjct: 143 LESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLW--GTDIAVG--------S 192
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DM + G++ AR VFD L +V WT +I Y Q ++A+++F D F P
Sbjct: 193 ALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEP 252
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARY-- 402
+ T++S++SA +LG++ +G +HSL +R+G D V LVDMYAK ++ Y
Sbjct: 253 DRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQAMDYAN 312
Query: 403 -IFETTSEKDVIAWNSIISG------------------LDDNVSPDAVTLVSVISACASL 443
+FE + DVI+W ++ISG L++++ P+ +T S++ ACA++
Sbjct: 313 KVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANI 372
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G +HA+ K +++ VG AL++ YA+ G + AR VF+ + E++ ++
Sbjct: 373 SDHDSGRQVHAHVIKSNQAAAHT-VGNALVSMYAESGCMEEARRVFNQLYERSMISCIT- 430
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW----------- 552
G L + ++ + F +++SA + GM+ +G
Sbjct: 431 ---------EGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGF 481
Query: 553 ---------------KCFY--SMCRDFKFVPSMK--HYVCMVDLLARAGRLEEALEFMEN 593
+C Y CR F + + M+ LA+ G E AL +
Sbjct: 482 GSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHD 541
Query: 594 M---PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP--DKACYYVLVSNLYASDG 648
M ++P+ + A L C G+ + M H + +Y + +L A G
Sbjct: 542 MILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSG 601
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 129/252 (51%), Gaps = 25/252 (9%)
Query: 361 GNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSE-KDVIAWNS 417
G+L +GR +H +R L D V N+L+ +Y++C +A AR +F+ +D+++W +
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 418 IISGLDDNVS-----------------PDAVTLVSVISACASLGA-VQVGSSLHAYSTKQ 459
+ S L N + P+A TL +V AC VG + K
Sbjct: 122 MASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKM 181
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD-GGGSLA 518
GL +++ VG+AL++ A+ GD SAR VFD + EK V W+ +I Y +QG+ ++
Sbjct: 182 GLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRY-VQGECAEEAVE 240
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
+F D L + +P+ ++++SAC+ G V G + +S+ F +VD+
Sbjct: 241 IFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ-LHSLALRMGFASDACVSCGLVDMY 299
Query: 579 ARAGRLEEALEF 590
A++ +E+A+++
Sbjct: 300 AKSN-IEQAMDY 310
>gi|193848497|gb|ACF22688.1| vegetative storage protein [Brachypodium distachyon]
Length = 587
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 191/519 (36%), Positives = 297/519 (57%), Gaps = 23/519 (4%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR-- 236
D+FV LV MYAKCR + S ++ + ++V TSM+ GY QN A E L F+R
Sbjct: 24 DAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQNRMAAEALEFFSRHV 83
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+ +GF+ + +TL S+++A A+L+ + G+ H ++++ E + LV A+L Y++ G
Sbjct: 84 VGQGFMP-SPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFEYDLVLVNAILGFYMRIGA 142
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
++ AR +F+ + D+V+W+ M+ GY QSG +AL + A PN VT+ SV+ A
Sbjct: 143 VQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMVEAGIKPNAVTVVSVVQA 202
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ ++ GR VH + +++G E + TV ALVDMY KC +A +F S+KD +AW
Sbjct: 203 CSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHEEAMQLFCRMSKKDAVAW 262
Query: 416 NSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
+ISG N PDAVT+V V++AC+ G ++ LH Y
Sbjct: 263 AVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACSESGVMRQAFCLHGYLVI 322
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G ++V AL++ Y+KCG+ A VF++ EK+ V WS+MI GYG+ G G ++
Sbjct: 323 TGF-CDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSSMISGYGVHGLGQQAVE 381
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF M+ V+PN + F ++LSACSH+G+V EG + F SM + + VP+ H+ MVDLL
Sbjct: 382 LFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLL 441
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
RAG L+EA + + D + A L C + ++ EV+ K+L+L PD A YY
Sbjct: 442 GRAGELQEAAKLLHGNG-RADAHTWCALLAACRAHHDTEMSEVVAAKLLKLDPDHAGYYN 500
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
L++N+Y D W + R +++ RGL+K PGCS V+L+
Sbjct: 501 LLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVELN 539
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 232/467 (49%), Gaps = 30/467 (6%)
Query: 66 KAFHALLI--VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+A HAL I T+ LV MY + + + +++ PD M+ Y
Sbjct: 9 RALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYEQ 68
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFS-----KVLKACCELRDIDEGMKVHCEIVKVGGP 178
N + + +EF+ R F+ S V+ A +L+D+ G H +++
Sbjct: 69 NRMAAEALEFFS----RHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNFE 124
Query: 179 DSFVLT-GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
VL ++ Y + + ++R++F+ +K+VV+W+ M+ GYVQ+ E L + +M
Sbjct: 125 YDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKM 184
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
E ++ N +T+ S+V AC+ + +G+ +H +KIG E+ + TAL+DMY+KC
Sbjct: 185 VEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCH 244
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+A +F + D V+W +I G+TQ+G PD+++++F + FP+ VT+ VL+A
Sbjct: 245 EEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAAC 304
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
++ G + +H + G D V ALVD+Y+KC + A +FE+ EKDV+ W+
Sbjct: 305 SESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWS 364
Query: 417 SIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
S+ISG + +V P+++T VSV+SAC+ G VQ G + T+
Sbjct: 365 SMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQV 424
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ N +A+++ + G+ Q A + + TW A++
Sbjct: 425 YGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAA 471
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 7/189 (3%)
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L A+ G +LHA + + ++ +V AL++ YAKC + ++A E + V ++
Sbjct: 2 LPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTS 61
Query: 503 MIGGYGMQGDGGGSLALFS-DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
M+ GY +L FS ++ + P+ V +++SA + V G C + R+
Sbjct: 62 MVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRN 121
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
F + ++ R G ++ A E M E DV + + G D+ E
Sbjct: 122 -NFEYDLVLVNAILGFYMRIGAVQAARRLFEGM-TEKDVVTWSCMV--TGYVQSGDICEA 177
Query: 622 MI--KKMLE 628
+ KKM+E
Sbjct: 178 LTAYKKMVE 186
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/557 (34%), Positives = 316/557 (56%), Gaps = 27/557 (4%)
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLTGLVDMYAKCRDIGSSR 200
KEH + K+L + + + ++H +++ P +F+L+ ++D+ +D+ +
Sbjct: 26 KEHHQTLTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDL----KDLAYAS 81
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV-LFNRMREGFVEGNQITLGSLVTACAKL 259
VF++ N+ ++ M+ G + V L+ +++ ++ N T L AC +
Sbjct: 82 LVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNV 141
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
R L GK H + K G++ + ++ +L+ MY +CG + AR VFDE+ DLVSW +MI
Sbjct: 142 RGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMI 201
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY++ G+ +A+ LF + + F P+ +T+ SVL A LG+L +GR V + +E
Sbjct: 202 SGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKME 261
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS----------- 427
+ + +AL+DMY KC + AR +F++ KDV+ WN+II+G N +
Sbjct: 262 VNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGM 321
Query: 428 ------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
PD VT++ V+SAC+++GA+ +G + +++++GL +VYV +AL++ YAKCG
Sbjct: 322 REAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGL-QHDVYVASALIDMYAKCGS 380
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML--NEEVQPNEVIFTTIL 539
A VF++M KN V+W+AMI G +L+LF M N VQPN++ F +L
Sbjct: 381 LDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVL 440
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SAC H G+V EG + F SM F VP ++HY CMVDL ARAG L EA + ++ MP +PD
Sbjct: 441 SACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPD 500
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
+ G+ L C D+GE +I+ LE+ + YV+ S +YA+ RW ++R L
Sbjct: 501 EIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVL 560
Query: 660 MKQRGLSKSPGCSLVDL 676
M+Q G+SK+PGCS +D+
Sbjct: 561 MRQCGVSKTPGCSWIDI 577
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 242/436 (55%), Gaps = 25/436 (5%)
Query: 39 QTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKY 98
QT H + L+L+ CKS LK HA ++++ + L+S + Y
Sbjct: 23 QTQKEHHQTLTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKPNF---LLSKIIDLKDLAY 79
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
A VF+ + P+ Y+F VM+R Y VE Y ++ + +NF + + AC
Sbjct: 80 ASLVFNQLTKPNIYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACG 139
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
+R + G HC + K G D +V L+ MYA+C ++G +R+VFDE D+++VSW S
Sbjct: 140 NVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNS 199
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
MI+GY + +E + LF MRE E +++TL S++ AC L L G+W+ G++L+
Sbjct: 200 MISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKK 259
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+E+NS++ +AL+DMY KCG++ AR VFD + + D+V+W A+I GY Q+G ++A+ LF
Sbjct: 260 MEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFN 319
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ A P+ VT+ VLSA + +G L++G+ V + GL+ D V +AL+DMYAKC
Sbjct: 320 GMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCG 379
Query: 396 VIADARYIFETTSEKDVIAWNSIISGL-----------------DDN--VSPDAVTLVSV 436
+ DA +FE+ K+ ++WN++IS L DN V P+ +T + V
Sbjct: 380 SLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGV 439
Query: 437 ISACASLGAVQVGSSL 452
+SAC G V G L
Sbjct: 440 LSACVHAGLVDEGRQL 455
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 193/568 (33%), Positives = 319/568 (56%), Gaps = 36/568 (6%)
Query: 141 LKEHDNFVFSKVLKACCELRDIDE--GMKVHCEIVKVGGPDSFVLTGLVDM--YAKCRDI 196
+K+H N + S +L+ C + ++ G+ + +++ D L+ LVD Y+ ++
Sbjct: 1 MKKHYNSILS-LLEKCKTMAELKRLHGLMITTSVIQ----DVIPLSRLVDFCAYSDSGNL 55
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
++ VF++ ++ W SMI GY ++ E L ++ MR+ + T ++ AC
Sbjct: 56 NYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKAC 115
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ + + G+ +H I+K G E++ + TALL MY CG++ A VFD++ ++V+WT
Sbjct: 116 SLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWT 175
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++I G + P +A++++ D + PN +T+ +VL A A+ +LN GR VH ++
Sbjct: 176 SLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQM 235
Query: 377 GLE------DYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD---- 424
GL+ ++ VI A+VDMYAKC + AR +F ++++AWNS+I +
Sbjct: 236 GLDPFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQA 295
Query: 425 -------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
PD T + VI ACA LGA+ G +LHAY +K L + + +GTA
Sbjct: 296 NEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNL-TDDTAIGTA 354
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQP 530
L++ YAK GDA+ A+ VF +++K+ W+++I G M G G +L F M + + P
Sbjct: 355 LVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIP 414
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
+E+ + +LSACSH G V +G F SM P+ +HY CMVDLL+RAGRL EA
Sbjct: 415 DEITYIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERL 474
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
+E MP+EP+ +++ A L+GC +Y D+ + + +++ EL D + YVL+SN+YA RW
Sbjct: 475 VEKMPVEPNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRW 534
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDLDI 678
V RELMK+R + KS G S V++ +
Sbjct: 535 EEVKMARELMKERKIQKSLGHSSVEMKM 562
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 171/488 (35%), Positives = 265/488 (54%), Gaps = 37/488 (7%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCN-TKLVSM--YGSFGHVKYARSVFDSMPNP 109
L+LL CK+ LK H L+I + D ++LV Y G++ YA+SVF+ + P
Sbjct: 9 LSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRP 68
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
Y + MI+ Y +++ + + Y+ MR++ D+F F VLKAC + + G VH
Sbjct: 69 SLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVH 128
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
IVK G D + T L+ MYA C D+ ++ +VFD+ NVV+WTS+IAG + NDC
Sbjct: 129 NCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPS 188
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE-------INS 281
E + ++ M V N+IT+ +++ ACA+ R L+ G+W+H ++G++ N
Sbjct: 189 EAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNV 248
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
L TA++DMY KCG+++ AR +F+++ +LV+W +MI Y Q G ++AL LF+D + A
Sbjct: 249 ILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRIA 308
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADA 400
F P+ T V+ A A LG L G+ +H+ + L D T I ALVDMYAK A
Sbjct: 309 GFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERA 368
Query: 401 RYIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACAS 442
+ +F +KDV AW S+I GL D + PD +T + V+SAC+
Sbjct: 369 QQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSH 428
Query: 443 LGAVQVGSSLHAYSTK--QGLLSSNVYVG--TALLNFYAKCGDAQSARMVFDAMREKNTV 498
+G V+ G + H S K G+ + + G LL+ + G+A+ R+V E NT
Sbjct: 429 VGKVEDGKN-HFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAE--RLVEKMPVEPNTA 485
Query: 499 TWSAMIGG 506
WSA++ G
Sbjct: 486 IWSALLNG 493
>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
Length = 941
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 204/623 (32%), Positives = 331/623 (53%), Gaps = 34/623 (5%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + G+ + HAL++ T N S+Y V A VF S+P
Sbjct: 316 SVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFSSIPCK 375
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL---------R 160
D S+ ++ Y L++D + + M+ D+ F +L +C + +
Sbjct: 376 DAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSK 435
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
+ +G +VH +++ G D+++ LV MY +C + +R F +NV SWT +I+
Sbjct: 436 SLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILIS 495
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
VQN A EGL L M E N+IT SL+ AC+ L GK +H I G+E
Sbjct: 496 LLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERIRTKGLES 555
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ ALL+MY C ++ +AR VF+ + D+VSWT +I Y +GYP +AL+L+ +
Sbjct: 556 DIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRME 615
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIA 398
P+ VT+ SVL A A L L G+ +H + G+E D V A+V Y KC +
Sbjct: 616 QEFSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVE 675
Query: 399 DARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACA 441
DAR +F+ +KD++ WN++I +++ + P+ VTL++++ +C+
Sbjct: 676 DARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCS 735
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC-GDAQSARMVFDAMREKNTVTW 500
S ++ GSSLH + +G LS V AL+N YAKC G+ ++A+ F+++ KN V+W
Sbjct: 736 STCKMERGSSLHREAAARGYLSHTSVV-NALINMYAKCCGNLEAAQTAFESVASKNVVSW 794
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
S+++ Y G+ + LF M + V PN V FT++L ACSH G+ EGW F SM
Sbjct: 795 SSIVAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQG 854
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
D P+ +HY CMV+LLA++GR+++A FM MP++PD S + + L C +++ + G
Sbjct: 855 DHHLEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGA 914
Query: 621 VMIKKMLELHPDKACYYVLVSNL 643
+ K++L+ P + YVL+ N+
Sbjct: 915 LAAKQLLDAEPRNSAAYVLLYNI 937
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 164/597 (27%), Positives = 273/597 (45%), Gaps = 43/597 (7%)
Query: 50 IPCLNLLGLCKSTG-SL--KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDS 105
I LN + C + G SL K HA ++ GL + + LV MYG G V+ AR+ FD
Sbjct: 11 ITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAFDR 70
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP D S+ MI Y ++ K ++ Y R + D F+ +L AC D+ G
Sbjct: 71 MPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFG 130
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H + D V GL+ MY+ C + + VF+ + +V +WT++IA Y ++
Sbjct: 131 RMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRH 190
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ +++M + + N+IT +++ C+ L L GK +H L G++ + +
Sbjct: 191 GKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLRME 250
Query: 285 TALLDMYVKCGNIRD-ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
+L+ MY KC D AR VF + ++SW+A I Y Q +A+K F
Sbjct: 251 NSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAIKTFELMNLEGV 307
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADAR 401
PN T+ SVL A A +G GR +H+L + G ++ TV+NA +YAKC +ADA
Sbjct: 308 KPNATTLTSVLRACATVGAHEQGRRIHAL-VLAGPYTQNTTVLNAAASLYAKCSRVADAS 366
Query: 402 YIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLG 444
+F + KD ++WN+I+S + PD +T ++++ +C+
Sbjct: 367 RVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSA 426
Query: 445 AVQV---------GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
++ G +H+ G L + Y+G L+ Y +CG AR F + ++
Sbjct: 427 LLKQYGNSKSLTDGRQVHSQMISNG-LDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQR 485
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
N +W+ +I G+ L L M E + N++ F ++L ACS TG + G K
Sbjct: 486 NVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLG-KTI 544
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS---LFGAFLHG 609
+ R + ++++ L+EA E M VS + A+ H
Sbjct: 545 HERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHA 601
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 206/423 (48%), Gaps = 18/423 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D + AC L D +G ++H I+ G G + LV MY KC + +R F
Sbjct: 9 DEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEARNAF 68
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D +++++SW +MI Y Q++C ++ + L+ R + +++T SL+ AC L
Sbjct: 69 DRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLK 128
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ LH + L + + L+ MY CG++ DA +VF+ D+ +WT +I YT
Sbjct: 129 FGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYT 188
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
+ G + A ++ N +T +VL + L L G+ VH L + GL+
Sbjct: 189 RHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDFSLR 248
Query: 383 VINALVDMYAKCHVIAD-ARYIFETTSEKDVIAWNSIISGLD--------------DNVS 427
+ N+L+ MY KC D AR +F S VI+W++ I+ + V
Sbjct: 249 MENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHWEAIKTFELMNLEGVK 308
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+A TL SV+ ACA++GA + G +HA G + N V A + YAKC A
Sbjct: 309 PNATTLTSVLRACATVGAHEQGRRIHAL-VLAGPYTQNTTVLNAAASLYAKCSRVADASR 367
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF ++ K+ V+W+A++ Y QG ++ L M E P+++ F TIL +CS + +
Sbjct: 368 VFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSAL 427
Query: 548 VGE 550
+ +
Sbjct: 428 LKQ 430
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/380 (29%), Positives = 187/380 (49%), Gaps = 26/380 (6%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V G++ITL + V+ACA L QGK +H IL G+ + L +L+ MY KCG++ +AR
Sbjct: 6 VPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEEAR 65
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+ FD + DL+SW AMI Y Q +A++L+ + P+ VT AS+L+A G
Sbjct: 66 NAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASG 125
Query: 362 NLNMGRMVHS--LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+L GRM+H LG + D V N L+ MY+ C + DA +FE + DV W ++I
Sbjct: 126 DLKFGRMLHEHFLGTSF-VSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVI 184
Query: 420 SGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+ + + + +T ++V+ C+SL ++ G +H + G L
Sbjct: 185 AAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSG-L 243
Query: 463 SSNVYVGTALLNFYAKCG-DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
++ + +L++ Y KC AR VF + + ++WSA I YG + ++ F
Sbjct: 244 DFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHWE---AIKTFE 300
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
M E V+PN T++L AC+ G +G + +++ + + L A+
Sbjct: 301 LMNLEGVKPNATTLTSVLRACATVGAHEQGRR-IHALVLAGPYTQNTTVLNAAASLYAKC 359
Query: 582 GRLEEALEFMENMPIEPDVS 601
R+ +A ++P + VS
Sbjct: 360 SRVADASRVFSSIPCKDAVS 379
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 92/179 (51%), Gaps = 7/179 (3%)
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ V D +TL++ +SACA+LG G +HA G L ++V + +L+ Y KCG +
Sbjct: 4 EGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSG-LGASVLLSNSLVYMYGKCGSVE 62
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR FD M E++ ++W+AMI Y G ++ L++ E +P+EV F ++L+AC
Sbjct: 63 EARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACF 122
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDV 600
+G + G + + FV VC ++ + + G L++A E PDV
Sbjct: 123 ASGDLKFG-RMLHEHFLGTSFVS--DQIVCNGLISMYSDCGSLDDATAVFE-WSFRPDV 177
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 219/639 (34%), Positives = 344/639 (53%), Gaps = 37/639 (5%)
Query: 66 KAFHA-LLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYF 122
+A H LL D L D L+++Y G V AR+VFD M D S+ M
Sbjct: 68 RALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLA 127
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV--------K 174
N + + M + + + AC +++C + K
Sbjct: 128 RNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFP-------HELYCLVGGVVLGLVHK 180
Query: 175 VG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
+G G D V + L+DM A+ D+ S+R+VFD ++K VV WT +I+ YVQ +CA+E +
Sbjct: 181 MGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVE 240
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
LF E E ++ T+ S+++AC +L ++ G LH L++G+ ++ + L+DMY
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYA 300
Query: 293 KC--GNIRD-ARSVFDELCSIDLVSWTAMIVGYTQSGYPD-KALKLFTDKKWADFFPNHV 348
K G D A VF+ + D++SWTA+I GY QSG + K + LF + PNH+
Sbjct: 301 KSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHI 360
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETT 407
T +S+L + A + + + GR VH+ I+ +TV NALV MYA+ + +AR +F
Sbjct: 361 TYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQL 420
Query: 408 SEKDVIAWNSIISGLD---------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
E+ +I I G D +V + T S+ISA AS+G + G LHA S K
Sbjct: 421 YERSMIP--CITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLK 478
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G S+ +V +L++ Y++CG + A F+ ++++N ++W++MI G G +L+
Sbjct: 479 AGF-GSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALS 537
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF DM+ V+PN+V + +LSACSH G+V EG + F SM RD +P M+HY CMVDLL
Sbjct: 538 LFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLL 597
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
AR+G ++EALEF+ MP++ D ++ L C + ++GE+ K ++EL P YV
Sbjct: 598 ARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYV 657
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
L+SNLYA G W V ++R M+ L+K G S ++++
Sbjct: 658 LLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVE 696
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 199/403 (49%), Gaps = 34/403 (8%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLTNDKC-NTKLVSMYG--SFGH-VKYARSVFDSM 106
+++ C GS++ H+L + GL +D C + LV MY + G + YA VF+ M
Sbjct: 259 SMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERM 318
Query: 107 PNPDFYSFQVMIRWYFLNDLYKD-IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P D S+ +I Y + + ++ ++ + M + ++ +S +LK+C + D D G
Sbjct: 319 PKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSG 378
Query: 166 MKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+VH ++K + + LV MYA+ + +R+VF++ +++++
Sbjct: 379 RQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMIP----------- 427
Query: 225 DCAQEG--LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
C EG L +R+ V + T SL++A A + L +G+ LH LK G +
Sbjct: 428 -CITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRF 486
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ +L+ MY +CG + DA F+EL +++SWT+MI G + GY ++AL LF D
Sbjct: 487 VSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTG 546
Query: 343 FFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVI 397
PN VT +VLSA + +G + G+ M G+ +E Y +VD+ A+ ++
Sbjct: 547 VKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC---MVDLLARSGIV 603
Query: 398 ADA-RYIFETTSEKDVIAWNSIISGL--DDNVSPDAVTLVSVI 437
+A +I E + D + W +++ DN+ +T +V+
Sbjct: 604 KEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVV 646
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 28/274 (10%)
Query: 361 GNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSE-KDVIAWNS 417
G+L +GR +H +R L D V N+L+ +Y++C +A AR +F+ +D+++W +
Sbjct: 62 GDLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTA 121
Query: 418 IISGLDDNVS-----------------PDAVTLVSVISACASLGA-VQVGSSLHAYSTKQ 459
+ S L N + P+A TL + AC VG + K
Sbjct: 122 MASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKM 181
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD-GGGSLA 518
GL ++V VG+AL++ A+ GD SAR VFD + EK V W+ +I Y +QG+ ++
Sbjct: 182 GLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRY-VQGECAEEAVE 240
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF D L + +P+ ++++SAC+ G V G + +S+ +VD+
Sbjct: 241 LFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQ-LHSLALRMGLASDACVSCGLVDMY 299
Query: 579 ARAG---RLEEALEFMENMPIEPDVSLFGAFLHG 609
A++ ++ A + E MP + DV + A + G
Sbjct: 300 AKSNIGQAMDYANKVFERMP-KNDVISWTALISG 332
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 345 bits (886), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 201/622 (32%), Positives = 328/622 (52%), Gaps = 28/622 (4%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N L++MYG AR VFD MP + S+ +I + N D + + M
Sbjct: 85 NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+ D F ++AC EL D+ G +VH +K G D V LV MY+K +
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG----NQITLGSLV 253
+F+ DK+++SW S+IAG+ Q E L +F RE VEG N+ GS
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVF---REMIVEGSHHPNEFHFGSAF 261
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
AC + + G+ +HG +K ++ + ++ +L DMY +C N+ AR F + + DLV
Sbjct: 262 RACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLV 321
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
SW +++ Y+ G +AL LF++ + + P+ +T+ +L A L GR++HS
Sbjct: 322 SWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL 381
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP---- 428
++LGL+ D +V N+L+ MYA+C ++ A +F ++DV+ WNSI++ + P
Sbjct: 382 VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVL 441
Query: 429 -------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
D ++L +V+SA A LG ++ +HAY+ K GL+ + T L++
Sbjct: 442 KLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNT-LIDT 500
Query: 476 YAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
YAKCG A +F+ M ++ +WS++I GY G + LFS M + ++PN V
Sbjct: 501 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVT 560
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
F +L+ACS G V EG + M ++ VP+ +H C+VDLLARAG+L EA F++ M
Sbjct: 561 FIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQM 620
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
P EPD+ ++ L +++ ++G+ + +L + P + YVL+ N+YA+ G W
Sbjct: 621 PFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFA 680
Query: 655 QVRELMKQRGLSKSPGCSLVDL 676
++++ M+ G+ KSPG S V L
Sbjct: 681 RLKKAMRTSGVKKSPGKSWVKL 702
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 152/498 (30%), Positives = 242/498 (48%), Gaps = 38/498 (7%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIV--KVGGPDSFVLTG-------LVDMYAKCRDIGSS 199
++ ++ AC LR + +G +VH +V PD+ L G L+ MY +C S+
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDA-QLAGNTVLGNHLITMYGRCAAPDSA 105
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
RQVFDE +N VSW S+IA +VQN A + L LF+ M +Q LGS V AC +L
Sbjct: 106 RQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTEL 165
Query: 260 RALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
+ G+ +H + LK E S L+ AL+ MY K G + D +F+ + DL+SW +
Sbjct: 166 GDVGTGRQVHAHALK--SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGS 223
Query: 318 MIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+I G+ Q G+ +AL++F + PN S A +G+ G +H L I+
Sbjct: 224 IIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY 283
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GL-------- 422
L+ D V +L DMYA+C + AR F D+++WNSI++ GL
Sbjct: 284 RLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLF 343
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
D + PD +T+ ++ AC A+ G +H+Y K G L +V V +LL+ YA+
Sbjct: 344 SEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLG-LDGDVSVCNSLLSMYAR 402
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
C D SA VF +++++ VTW++++ L LFS + E + + +
Sbjct: 403 CSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNV 462
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
LSA + G E K ++ V ++D A+ G L++A+ E M
Sbjct: 463 LSASAELGYF-EMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNR 521
Query: 599 DVSLFGAFLHGCGLYSRF 616
DV + + + G Y++F
Sbjct: 522 DVFSWSSLIVG---YAQF 536
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 211/612 (34%), Positives = 332/612 (54%), Gaps = 29/612 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L++MY GHV+ AR VFD M D S+ M N ++ + M +
Sbjct: 85 LLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRP 144
Query: 145 DNFVFSKVLKAC--CELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSR 200
+ F AC EL G V +K G G D V L+DM+A+ D+ ++R
Sbjct: 145 NAFTLCAAAHACFPGELFR-SSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAAR 203
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VF+ +++ VV WT MI YVQ CA + + LF M E E + T+ S+V+ACA+
Sbjct: 204 KVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQG 263
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG---NIRDARSVFDELCSIDLVSWTA 317
+ G+ LH +L++G+ ++ + L+DMY K ++ AR VF + + +++SWTA
Sbjct: 264 SAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTA 323
Query: 318 MIVGYTQ-SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+I GY Q G + A++L + PNH+T +S+L A A L + + GR +H+ ++
Sbjct: 324 LISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKT 383
Query: 377 GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIA--------------WNSIISG 421
+ + V+ NALV MYA+ + +AR F+ E+++++ W+S I
Sbjct: 384 SIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIES 443
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+D VS T S++SA A++G G LHA S K G S+ + +L++ Y++CG
Sbjct: 444 MDVGVS--TFTFASLLSAAATVGLPTKGQQLHALSIKTGF-ESDKGISNSLVSMYSRCGY 500
Query: 482 AQSARMVFDAMRE-KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
A FD M + N ++W+++I G +L+LF DM+ V+PN+V + +LS
Sbjct: 501 LDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLS 560
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSH G+V EG + F SM +D + +P M+HY CMVDLLAR+G ++EALEF+ MP + D
Sbjct: 561 ACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADA 620
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++ L C Y ++GE+ + +++L P YVL+SNLYA G W V ++R LM
Sbjct: 621 LVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLM 680
Query: 661 KQRGLSKSPGCS 672
+ R LSK G S
Sbjct: 681 RHRNLSKETGLS 692
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 191/616 (31%), Positives = 338/616 (54%), Gaps = 22/616 (3%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDS--MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
CN L++MYG G + AR +FD M D S+ +I + + + ++ M++
Sbjct: 183 CNA-LIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQE 241
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGS 198
+ + F L+ + + GM +H +K D +V L+ MYAKC +
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMED 301
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+ +VF L ++ VSW ++++G VQN+ ++ L F M+ + +Q+++ +L+ A +
Sbjct: 302 AERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGR 361
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L GK +H Y ++ G++ N + L+DMY KC ++ F+ + DL+SWT +
Sbjct: 362 SGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTI 421
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I GY Q+ +A+ LF + + + I SVL A + L + N R +H + L
Sbjct: 422 IAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL 481
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GL----------- 422
D + NA+V++Y + AR FE+ KD+++W S+I+ GL
Sbjct: 482 ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSL 541
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
N+ PD++ ++S +SA A+L +++ G +H + ++G + ++L++ YA CG
Sbjct: 542 KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGP-IASSLVDMYACCGT 600
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+++R +F ++++++ + W++MI GM G G ++ALF M +E V P+ + F +L A
Sbjct: 601 VENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYA 660
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH+G++ EG + F M ++ P +HY CMVDLL+R+ LEEA +F+ +MPI+P
Sbjct: 661 CSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSE 720
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ A L C ++S +LGE+ K++L+ + Y L+SN++A+DGRW V +VR MK
Sbjct: 721 VWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMK 780
Query: 662 QRGLSKSPGCSLVDLD 677
GL K+PGCS +++D
Sbjct: 781 GNGLKKNPGCSWIEVD 796
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 188/635 (29%), Positives = 306/635 (48%), Gaps = 36/635 (5%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
LL LC + +L + HA L+ L+ TKL+ MY G +K A VFD M
Sbjct: 52 LLDLCVAVKALPQGQQLHARLLKSHLS-AFLATKLLHMYEKCGSLKDAVKVFDEMTERTI 110
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
+++ M+ + + Y + +E YK MR D F VLKAC L + G ++H
Sbjct: 111 FTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGV 170
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL--DKNVVSWTSMIAGYVQNDCAQ 228
VK G G FV L+ MY KC D+G +R +FD + ++ VSW S+I+ +V
Sbjct: 171 AVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCL 230
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E L LF RM+E V N T + + + G +HG LK + ++ AL+
Sbjct: 231 EALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALI 290
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
MY KCG + DA VF + D VSW ++ G Q+ AL F D + + P+ V
Sbjct: 291 AMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQV 350
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETT 407
++ ++++AS + GNL G+ VH+ IR GL+ I N L+DMYAKC + Y FE
Sbjct: 351 SVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECM 410
Query: 408 SEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGS 450
EKD+I+W +II+G N + D + + SV+ AC+ L +
Sbjct: 411 HEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIR 470
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H Y K+ L +++ + A++N Y + G AR F+++R K+ V+W++MI
Sbjct: 471 EIHGYVFKRDL--ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHN 528
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G +L LF + +QP+ + + LSA ++ + +G + + R F+
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEG-PI 587
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
+VD+ A G +E + + ++ + D+ L+ + ++ G++ + + KKM + +
Sbjct: 588 ASSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHGCGNEAIALFKKMTDEN 646
Query: 631 --PDKACYYVLVSNLYASDGRWIRVNQVR--ELMK 661
PD + L LYA + V R E+MK
Sbjct: 647 VIPDHITFLAL---LYACSHSGLMVEGKRFFEIMK 678
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/414 (27%), Positives = 203/414 (49%), Gaps = 22/414 (5%)
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
S +L C ++ + +G ++H ++K +F+ T L+ MY KC + + +VFDE ++
Sbjct: 50 SLLLDLCVAVKALPQGQQLHARLLK-SHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTER 108
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+ +W +M+ +V + E + L+ MR V + T S++ AC L G +H
Sbjct: 109 TIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIH 168
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC--SIDLVSWTAMIVGYTQSGY 327
G +K G + AL+ MY KCG++ AR +FD + D VSW ++I + G
Sbjct: 169 GVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGK 228
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINA 386
+AL LF + N T + L + +G +H ++ D V NA
Sbjct: 229 CLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANA 288
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
L+ MYAKC + DA +F + +D ++WN+++SGL N PD
Sbjct: 289 LIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPD 348
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
V+++++I+A G + G +HAY+ + G L SN+ +G L++ YAKC + F
Sbjct: 349 QVSVLNLIAASGRSGNLLNGKEVHAYAIRNG-LDSNMQIGNTLIDMYAKCCCVKHMGYAF 407
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ M EK+ ++W+ +I GY ++ LF + + + + ++ ++L ACS
Sbjct: 408 ECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACS 461
Score = 146 bits (368), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 165/322 (51%), Gaps = 4/322 (1%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDS 105
+ LNL+ +G+L K HA I +GL +N + L+ MY VK+ F+
Sbjct: 350 VSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFEC 409
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M D S+ +I Y N+ + + + ++ ++ + + D + VL+AC L+ +
Sbjct: 410 MHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469
Query: 166 MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H + K D + +V++Y + +R+ F+ K++VSWTSMI V N
Sbjct: 470 REIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNG 529
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
E L LF +++ ++ + I + S ++A A L +L +GK +HG++++ G + + +
Sbjct: 530 LPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIAS 589
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+L+DMY CG + ++R +F + DL+ WT+MI G ++A+ LF + P
Sbjct: 590 SLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIP 649
Query: 346 NHVTIASVLSASAQLGNLNMGR 367
+H+T ++L A + G + G+
Sbjct: 650 DHITFLALLYACSHSGLMVEGK 671
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 345 bits (885), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 209/647 (32%), Positives = 328/647 (50%), Gaps = 26/647 (4%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPN 108
++L CK SL+ H L++ G ++D CN LVS+Y G + A +F +M
Sbjct: 276 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA-LVSLYFHLGSLISAEHIFSNMSQ 334
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D ++ +I + +E +K M+ E D+ + ++ AC + G ++
Sbjct: 335 RDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQL 394
Query: 169 HCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H K+G + + G L+++YAKC DI ++ F ET +NVV W M+ Y D
Sbjct: 395 HAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDL 454
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ +F +M+ + NQ T S++ C +L L G+ +H I+K ++N+++ + L
Sbjct: 455 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVL 514
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY K G + A + D+VSWT MI GYTQ + DKAL F +
Sbjct: 515 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 574
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
V + + +SA A L L G+ +H+ G D NALV +Y+KC I +A FE
Sbjct: 575 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQ 634
Query: 407 TSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
T D IAWN+++SG + + + T S + A + ++ G
Sbjct: 635 TEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQG 694
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA TK G S V A+++ YAKCG A+ F + KN V+W+AMI Y
Sbjct: 695 KQVHAVITKTGY-DSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSK 753
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L F M++ V+PN V +LSACSH G+V +G + F SM ++ P +
Sbjct: 754 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPE 813
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HYVC+VD+L RAG L A +F+ MPIEPD ++ L C ++ ++GE +LEL
Sbjct: 814 HYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLEL 873
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P+ + YVL+SNLYA +W + R+ MK++G+ K PG S +++
Sbjct: 874 EPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEV 920
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 158/559 (28%), Positives = 268/559 (47%), Gaps = 30/559 (5%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L G K+ GSL + H+ ++ G N+ C + KL+ Y G + A VFD MP
Sbjct: 74 LEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERT 133
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC---CELRDIDEGMK 167
+++ MI+ L + + M + FS VL+AC D+ E +
Sbjct: 134 IFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVE--Q 191
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I+ G G + V L+D+Y++ + +R+VFD K+ SW +MI+G +N+C
Sbjct: 192 IHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNEC 251
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E + LF M + S+++AC K+ +L G+ LHG +LK+G ++++ A
Sbjct: 252 EVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 311
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ +Y G++ A +F + D V++ +I G +Q GY +KA++LF + P+
Sbjct: 312 LVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPD 371
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFE 405
T+AS++ A + G L G+ +H+ +LG I AL+++YAKC I A F
Sbjct: 372 SNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFL 431
Query: 406 TTSEKDVIAWNSIISG---LDD--------------NVSPDAVTLVSVISACASLGAVQV 448
T ++V+ WN ++ LDD + P+ T S++ C LG +++
Sbjct: 432 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 491
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H+ K N YV + L++ YAK G +A + K+ V+W+ MI GY
Sbjct: 492 GEQIHSQIIKTS-FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 550
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
+L F ML+ ++ +EV T +SAC+ + EG + C F +
Sbjct: 551 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 609
Query: 569 KHYVCMVDLLARAGRLEEA 587
+V L ++ G +EEA
Sbjct: 610 PFQNALVTLYSKCGNIEEA 628
>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 768
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 203/620 (32%), Positives = 331/620 (53%), Gaps = 23/620 (3%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N + L++MYG AR VFD M + + S+ +I + N D + + M
Sbjct: 79 NTILSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSML 138
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV-GGPDSFVLTGLVDMYAKCRDIG 197
+ D F ++AC EL D+ G +VH + +K G V LV MY+K +G
Sbjct: 139 RLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVG 198
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTAC 256
+F+ DK++ SW S+IAG Q + L +F M EG N+ GS+ AC
Sbjct: 199 DGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRAC 258
Query: 257 AK-LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
+ + +L G+ +HG +K ++ NS+ +L DMY +C + A VF + S DLVSW
Sbjct: 259 SVVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSW 318
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++I ++ G +A+ LF++ +++ P+ +T+ ++L A L GR +HS ++
Sbjct: 319 NSLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVK 378
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDDNV-- 426
LGL D V N+L+ MY +C A +F T+++DV+ WNSI++ ++D
Sbjct: 379 LGLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKL 438
Query: 427 ---------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
S D ++L +V+SA A LG ++ +HAY+ K GL+S + + AL++ YA
Sbjct: 439 FRLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVHAYAFKVGLVSDAI-LSNALIDTYA 497
Query: 478 KCGDAQSARMVFDAMRE-KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
KCG A +F+ M ++ +WS++I GY G +L LF+ M N V+PN V F
Sbjct: 498 KCGSLDDANKLFEIMGTGRDVFSWSSLIVGYAQFGYAKEALDLFARMRNLGVKPNHVTFV 557
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L ACS G+V EG + M ++ VP+ +H C++DLLARAGRL EA +F++ MP
Sbjct: 558 GVLIACSRVGLVDEGCYYYSIMEPEYGIVPTKEHCSCVIDLLARAGRLSEAAKFVDQMPF 617
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
EPD+ ++ L ++ ++G+ + +L + P + YVL+ N+YAS G W ++
Sbjct: 618 EPDIIMWNTLLAASRTHNDVEMGKRAAEGVLNIDPSHSAAYVLLCNIYASSGNWNEFARL 677
Query: 657 RELMKQRGLSKSPGCSLVDL 676
++ M+ G+ KSPG S + L
Sbjct: 678 KKDMRSSGVQKSPGKSWIKL 697
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 150/312 (48%), Gaps = 26/312 (8%)
Query: 256 CAKLRALHQGKWLHGYILKIG-----IEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
C++LR+ QG+ +H ++L + N+ L L+ MY +C AR VFD +
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
+ VSW A+I + Q+ A+ LF+ P+ + S + A A+LG+L +GR VH
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVH 169
Query: 371 SLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS-- 427
+ I+ + ++ NALV MY+K + D +FE +KD+ +W SII+GL
Sbjct: 170 AQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREM 229
Query: 428 ----------------PDAVTLVSVISACA-SLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
P+ SV AC+ + +++ G +H K L N Y G
Sbjct: 230 DALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYK-LDRNSYAGC 288
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
+L + YA+C SA VF + + V+W+++I + G ++ LFS+M ++P
Sbjct: 289 SLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSLKP 348
Query: 531 NEVIFTTILSAC 542
+ + +L AC
Sbjct: 349 DGITVMALLCAC 360
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 440 CASLGAVQVGSSLH----AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
C+ L + G +H A S L+ N + L+ Y +C SARMVFD M ++
Sbjct: 50 CSRLRSFPQGRLVHRHLLASSAGAAYLARNTILSNHLITMYGRCAAPDSARMVFDGMLDR 109
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
N V+W+A+I + ++ LFS ML P+E + + AC+ G +G G
Sbjct: 110 NPVSWAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLG 165
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 320/590 (54%), Gaps = 25/590 (4%)
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
Y++ +MIR N + + Y M +N + +LKAC L I G +H
Sbjct: 11 LYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHG 70
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
++K+G D+FV T LVDMY+KC + S+RQVFDE ++VVSW +M++ Y + +
Sbjct: 71 HVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQ 130
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALH---QGKWLHGYILKIGI-EINSHLVT 285
L L M E T S+++ + L + GK +H ++K+GI + L
Sbjct: 131 ALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVSLAN 190
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+L+ MYV+ + +AR VFD + ++SWT MI GY + G+ +A LF +
Sbjct: 191 SLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGI 250
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF 404
+ V +++S Q+ +L + VHSL ++ G E V N L+ MYAKC + AR IF
Sbjct: 251 DFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIF 310
Query: 405 ETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQ 447
+ EK +++W S+I+G + ++ P+ TL +V+SACA LG++
Sbjct: 311 DLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLS 370
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G + Y GL S+ V T+L++ Y+KCG AR VF+ + +K+ W++MI Y
Sbjct: 371 IGQEIEEYIFLNGL-ESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSY 429
Query: 508 GMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
+ G G +++LF M E + P+ +++T++ ACSH+G+V EG K F SM +DF P
Sbjct: 430 AIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITP 489
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
+++H C++DLL R G+L+ AL ++ MP + ++G L C ++ +LGE+ ++
Sbjct: 490 TVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVRL 549
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L+ P + YVL++NLY S G+W + +R M +GL K G S V++
Sbjct: 550 LDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQVEV 599
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 234/460 (50%), Gaps = 36/460 (7%)
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
+ +++ +W MI N + L +++ M V GN +T L+ ACA L ++ G
Sbjct: 6 SFRRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHG 65
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
LHG++LK+G + ++ + TAL+DMY KC ++ AR VFDE+ +VSW AM+ Y++
Sbjct: 66 TMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRR 125
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN---MGRMVHSLGIRLGLE--D 380
D+AL L + F P T S+LS + L + +G+ +H I+LG+ +
Sbjct: 126 SSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLE 185
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------D 423
++ N+L+ MY + ++ +AR +F+ EK +I+W ++I G
Sbjct: 186 VSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQH 245
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+V D V +++IS C + + + SS+H+ K G + V L+ YAKCG+
Sbjct: 246 QSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDP-VENLLITMYAKCGNLT 304
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
SAR +FD + EK+ ++W++MI GY G G +L LF M+ +++PN T++SAC+
Sbjct: 305 SARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACA 364
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKH----YVCMVDLLARAGRLEEALEFMENMPIEPD 599
G + G + ++ F+ ++ ++ + ++ G + +A E E + + D
Sbjct: 365 DLGSLSIGQE-----IEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVT-DKD 418
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLE---LHPDKACY 636
++++ + ++ ++ + + KM + PD Y
Sbjct: 419 LTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVY 458
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 221/487 (45%), Gaps = 29/487 (5%)
Query: 55 LLGLCKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
LL C + S++ H ++ G D T LV MY HV AR VFD MP
Sbjct: 52 LLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRS 111
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID---EGMK 167
S+ M+ Y + K M E F +L L + G
Sbjct: 112 VVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKS 171
Query: 168 VHCEIVKVGGP--DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+HC ++K+G + + L+ MY + + +R+VFD +K+++SWT+MI GYV+
Sbjct: 172 IHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIG 231
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A E LF +M+ V + + +L++ C ++R L +H +LK G +
Sbjct: 232 HAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVEN 291
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
L+ MY KCGN+ AR +FD + ++SWT+MI GY G+P +AL LF D P
Sbjct: 292 LLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRP 351
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
N T+A+V+SA A LG+L++G+ + GLE D V +L+ MY+KC I AR +F
Sbjct: 352 NGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVF 411
Query: 405 ETTSEKDVIAWNSIISG------------------LDDNVSPDAVTLVSVISACASLGAV 446
E ++KD+ W S+I+ + + PDA+ SV AC+ G V
Sbjct: 412 ERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLV 471
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIG 505
+ G K ++ V T L++ + G A M + W ++
Sbjct: 472 EEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLS 531
Query: 506 GYGMQGD 512
+ G+
Sbjct: 532 ACRIHGN 538
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 11/254 (4%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
LNL+ C L + H+L++ G D L++MY G++ AR +FD +
Sbjct: 256 LNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLIIE 315
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
S+ MI Y + ++ ++ M + + + V+ AC +L + G ++
Sbjct: 316 KSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEI 375
Query: 169 HCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
E + + G D V T L+ MY+KC I +R+VF+ DK++ WTSMI Y +
Sbjct: 376 E-EYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSYAIHGM 434
Query: 227 AQEGLVLFNRMR--EGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHL 283
E + LF++M EG + + I S+ AC+ + +G K+ GI
Sbjct: 435 GNEAISLFHKMTTAEGIMP-DAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEH 493
Query: 284 VTALLDMYVKCGNI 297
T L+D+ + G +
Sbjct: 494 CTCLIDLLGRVGQL 507
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 308/555 (55%), Gaps = 25/555 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
F F VLKAC +L +++ K+H I+ G FV T LVD+Y+KC S+R VF
Sbjct: 27 SEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSARLVF 86
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D+ K++VSW S+I+ + ++ + + +M+ +E + T + +C+ L
Sbjct: 87 DQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS----LP 142
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QG +HGYI K+G++++ L +++ MY++ I A SVF L +VSWT ++ GY
Sbjct: 143 QGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYL 202
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
+G K +F + P+ + +++S GNL + +VHSL ++ G +
Sbjct: 203 SAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDHKDP 262
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
I N LV MYAKC + AR +F+ EK V W S+ISG L
Sbjct: 263 IDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTA 322
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
P+ +TL +V+SACA +G++++G + Y GL S++ V T+L++ + KCG + A
Sbjct: 323 SRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGL-GSDLRVQTSLIHMFCKCGSIKKA 381
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQPNEVIFTTILSACSH 544
+ +F+ + K+ WSAMI GY + G G +L LF M NE ++P+ +++T++L ACSH
Sbjct: 382 QALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSH 441
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+G++ +G K F SM +DF PS++HY C+VDLL RAG +E AL ++ MP+ ++
Sbjct: 442 SGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWA 501
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
FL C + +LGE K + +L P +VL++NLY S G+W + R ++ RG
Sbjct: 502 PFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSIINARG 561
Query: 665 LSKSPGCSLVDLDIA 679
L K PG S +++D A
Sbjct: 562 LVKEPGWSQIEIDGA 576
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 180/387 (46%), Gaps = 24/387 (6%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T LV +Y AR VFD MP S+ +I + + K M+
Sbjct: 66 QTALVDVYSKCCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGL 125
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT-GLVDMYAKCRDIGSSRQ 201
E + F+ L +C + +G+ +H I K+G L ++ MY + I +
Sbjct: 126 ELSSATFTGFLASC----SLPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALS 181
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF K++VSWT ++ GY+ + +FN+MR V + I +L++ C
Sbjct: 182 VFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGN 241
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +H +LK G + + L+ MY KC ++ AR VFD + + WT+MI G
Sbjct: 242 LLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISG 301
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-ED 380
Y Q GYP++AL LF PN +T+A+VLSA A++G+L MG + + GL D
Sbjct: 302 YAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSD 361
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------------ 422
V +L+ M+ KC I A+ +FE KD+ W+++I+G
Sbjct: 362 LRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQN 421
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVG 449
+ + PDA+ SV+ AC+ G ++ G
Sbjct: 422 EVGIKPDAIVYTSVLLACSHSGLIEDG 448
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 198/421 (47%), Gaps = 38/421 (9%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V G++ T ++ ACAKL +L LH +IL G + + + TAL+D+Y KC AR
Sbjct: 24 VHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHSAR 83
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD++ LVSW ++I + + + D++ + + + T L++ +
Sbjct: 84 LVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS--- 140
Query: 362 NLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L G +H +LGL+ + + N+++ MY + + I A +F T +K +++W I+
Sbjct: 141 -LPQGLSIHGYITKLGLDLHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILG 199
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G V PD++ V++IS C G + + +H+ K G
Sbjct: 200 GYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKSGFDH 259
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+ + L+ YAKC D SAR VFDA+ EK+ W++MI GY G +L LF+ +
Sbjct: 260 KDP-IDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNML 318
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEG-----WKCFYSMCRDFKFVPSMKHYVCMVDLL 578
L +PNE+ T+LSAC+ G + G + + D + S+ H C
Sbjct: 319 LRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFC----- 373
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM---LELHPDKAC 635
+ G +++A E +P D++++ A ++G ++ + KM + + PD
Sbjct: 374 -KCGSIKKAQALFERIP-NKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIV 431
Query: 636 Y 636
Y
Sbjct: 432 Y 432
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/496 (27%), Positives = 222/496 (44%), Gaps = 61/496 (12%)
Query: 36 ELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALL-IVDGLTNDKCNTKL-------- 86
+DQ+F + LLGL S+ + F A + GL+ TKL
Sbjct: 109 HIDQSFGILKQM------QLLGLELSSATFTGFLASCSLPQGLSIHGYITKLGLDLHLPL 162
Query: 87 ----VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+SMY + A SVF ++ S+ +++ Y + + MR +
Sbjct: 163 ANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCV 222
Query: 143 EHDNFVFSKVLKACCELR-DIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSR 200
D+ VF ++ +CC+L ++ M VH ++K G + LV MYAKC+D+ S+R
Sbjct: 223 GPDSIVFVNLI-SCCKLSGNLLLAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSAR 281
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VFD +K+V WTSMI+GY Q E L LFN + N++TL ++++ACA++
Sbjct: 282 RVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMG 341
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+L G+ + YIL G+ + + T+L+ M+ KCG+I+ A+++F+ + + DL W+AMI
Sbjct: 342 SLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMIN 401
Query: 321 GYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGI 374
GY G +AL LF + P+ + SVL A + G + G M GI
Sbjct: 402 GYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGI 461
Query: 375 RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV 434
++ Y+ LVD+ + + A T E V+ A
Sbjct: 462 EPSIQHYS---CLVDLLGRAGYVELA---LRTIQEMPVLV--------------QARVWA 501
Query: 435 SVISACASLGAVQVGS-------SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
+SAC + +++G L ST +L +N+Y K +A AR
Sbjct: 502 PFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSM------GKWKEAAKARS 555
Query: 488 VFDAMREKNTVTWSAM 503
+ +A WS +
Sbjct: 556 IINARGLVKEPGWSQI 571
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 419 ISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+S V T V+ ACA L +++ + LH++ G ++V+V TAL++ Y+K
Sbjct: 17 LSSHTSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTG-FQAHVFVQTALVDVYSK 75
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
C SAR+VFD M K+ V+W+++I + S + M ++ + FT
Sbjct: 76 CCCFHSARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGF 135
Query: 539 LSACS 543
L++CS
Sbjct: 136 LASCS 140
>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic-like [Brachypodium distachyon]
Length = 782
Score = 345 bits (884), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 195/590 (33%), Positives = 316/590 (53%), Gaps = 22/590 (3%)
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+PD + V+IR + L + + Y+ M D F F V+K C L ++EG
Sbjct: 69 SPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRA 128
Query: 168 VHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
H +++G S V TG L+ YAK + + +VFD +++V+W SM+ GYV N
Sbjct: 129 AHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNG 188
Query: 226 CAQEGLVLFNRMREGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
L F M EG V+ + + + + + AC AL QG+ +H Y+++ G+E + +
Sbjct: 189 LGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVG 248
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
T+LLDMY KCG I A +F + S +V+W MI GY +G P++A F K
Sbjct: 249 TSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQ 308
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYI 403
VT ++L+A AQ + GR VH R + V+ AL++MY+K + + I
Sbjct: 309 VEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETI 368
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
F + K +++WN++I+ L+ + PD T+ +V+ A LG +
Sbjct: 369 FGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLL 428
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ +H+Y + N V A+++ YA+CGD S+R +FD M K+ ++W+ +I G
Sbjct: 429 RQCRQMHSYIVRLDY-GENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMG 487
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
Y + G G +L +FS+M + +QPNE F ++L+ACS +GM EGW F M RD+ +P
Sbjct: 488 YAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIP 547
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++HY CM DLL RAG L E L+F+E++PI P ++G+ L + D+ E +++
Sbjct: 548 QIEHYGCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERI 607
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
EL D YV++S++YA GRW V ++R M ++GL ++ S+V+L
Sbjct: 608 FELEHDNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVEL 657
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 133/419 (31%), Positives = 212/419 (50%), Gaps = 31/419 (7%)
Query: 59 CKSTGSL---KAFHALLIVDGLTNDKCNT--KLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
C G+L +A H+ I GL + T L++ Y G V A VFD MP D +
Sbjct: 117 CARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVT 176
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+ M+ Y N L ++ ++ M + L+ +HD L ACC + +G +VH +
Sbjct: 177 WNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYV 236
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
++ G D V T L+DMY KC I S+ +F + VV+W MI GY N C +E
Sbjct: 237 IRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAF 296
Query: 232 VLFNRMREGFVEGNQ---ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
F +M+ EG+Q +T +L+ ACA+ + G+ +HGY+ + + L TALL
Sbjct: 297 DCFVQMK---AEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALL 353
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
+MY K G ++ + ++F ++ + LVSW MI Y ++A+ LF + +P++
Sbjct: 354 EMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYF 413
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
T+++V+ A LG L R +HS +RL E+ V NA++ MYA+C + +R IF+
Sbjct: 414 TMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKM 473
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
+ KDVI+WN+II G + + P+ T VSV++AC+ G G
Sbjct: 474 AGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEG 532
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 160/321 (49%), Gaps = 6/321 (1%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HA +I GL D K T L+ MY G + A +F +MP+ ++ MI Y LN
Sbjct: 230 REVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALN 289
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVL 183
++ + + M+ + + +L AC + G VH + + P +
Sbjct: 290 GCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLE 349
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L++MY+K + SS +F + +K +VSW +MIA Y+ + E + LF + +
Sbjct: 350 TALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLY 409
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ T+ ++V A L L Q + +H YI+++ N+ + A++ MY +CG++ +R +
Sbjct: 410 PDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKI 469
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
FD++ D++SW +I+GY G AL++F++ K PN T SVL+A + G
Sbjct: 470 FDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMA 529
Query: 364 NMGRMVHSLGIRLGLEDYTVI 384
+ G + +L R DY +I
Sbjct: 530 DEGWIQFNLMQR----DYGII 546
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 8/268 (2%)
Query: 39 QTFASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDG-LTNDKCNTKLVSMYGSFG 94
Q A H + + +NLL C T S ++ H + L + T L+ MY G
Sbjct: 301 QMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVG 360
Query: 95 HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLK 154
VK + ++F M N S+ MI Y ++Y + + + + + D F S V+
Sbjct: 361 KVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVP 420
Query: 155 ACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS 213
A L + + ++H IV++ G ++ V ++ MYA+C D+ SSR++FD+ K+V+S
Sbjct: 421 AFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVIS 480
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W ++I GY + + L +F+ M+ ++ N+ T S++TAC+ +G W+ ++
Sbjct: 481 WNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEG-WIQFNLM 539
Query: 274 K--IGIEINSHLVTALLDMYVKCGNIRD 299
+ GI + D+ + G++R+
Sbjct: 540 QRDYGIIPQIEHYGCMTDLLGRAGDLRE 567
>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
Length = 687
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 204/573 (35%), Positives = 317/573 (55%), Gaps = 34/573 (5%)
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD 195
+R R+ +N+ F LKAC L D G +H + G D FV T L+DMY KC
Sbjct: 2 LRHRVAP-NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL--VLFNRMREGFVEGNQITLGSLV 253
+ + +F +++V+W +M+AGY + + +L +M+ + N TL +L+
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSH----------LVTALLDMYVKCGNIRDARSV 303
A+ AL QG +H Y ++ + N + L TALLDMY KCG++ AR V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF-FPNHVTIASVLSASAQLGN 362
FD + + + V+W+A+I G+ +A LF F + +IAS L A A L +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L MG +H+L + G+ D T N+L+ MYAK +I A +F+ + KD +++++++SG
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
N V PDA T+VS+I AC+ L A+Q G H +GL +S
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL-AS 359
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ AL++ YAKCG +R VF+ M ++ V+W+ MI GYG+ G G + ALF +M
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMN 419
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
N P+ V F +LSACSH+G+V EG F+ M + P M+HY+CMVDLL+R G L
Sbjct: 420 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFL 479
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA EF+++MP+ DV ++ A L C +Y DLG+ + + + EL P+ +VL+SN+Y
Sbjct: 480 DEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIY 539
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
++ GR+ +VR + K +G KSPGCS ++++
Sbjct: 540 SAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 572
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 238/514 (46%), Gaps = 40/514 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+A H I GL D +T L+ MY + A +F +MP D ++ M+ Y +
Sbjct: 30 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 89
Query: 125 DLYKDIVEFYKCMR---KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV-------- 173
+Y V M+ RL+ + + + + +L + + +G VH +
Sbjct: 90 GMYHHAVAHLLSMQMQMHRLRPNASTLVA-LLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 174 --KVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
K D +L T L+DMYAKC + +R+VFD +N V+W+++I G+V +
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 231 LVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+LF M +G + ++ S + ACA L L G+ LH + K G+ + +LL
Sbjct: 209 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY K G I A ++FDE+ D VS++A++ GY Q+G ++A +F + + P+ T
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 328
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTS 408
+ S++ A + L L GR H I GL T I NAL+DMYAKC I +R +F
Sbjct: 329 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 388
Query: 409 EKDVIAWNSIISG--------------LDDN---VSPDAVTLVSVISACASLGAVQVGSS 451
+D+++WN++I+G L+ N PD VT + ++SAC+ G V G
Sbjct: 389 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 448
Query: 452 -LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGM 509
H GL + +++ ++ G A +M + V W A++G +
Sbjct: 449 WFHVMGHGYGLTPRMEHY-ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 507
Query: 510 QG--DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
D G ++ L E N V+ + I SA
Sbjct: 508 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 541
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMP 107
++L+ C +L + H +I+ GL ++ CN L+ MY G + +R VF+ MP
Sbjct: 330 VSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA-LIDMYAKCGRIDLSRQVFNMMP 388
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ D S+ MI Y ++ L K+ + M D F +L AC + EG
Sbjct: 389 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 446
>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
Length = 698
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 204/573 (35%), Positives = 317/573 (55%), Gaps = 34/573 (5%)
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD 195
+R R+ +N+ F LKAC L D G +H + G D FV T L+DMY KC
Sbjct: 2 LRHRVAP-NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL--VLFNRMREGFVEGNQITLGSLV 253
+ + +F +++V+W +M+AGY + + +L +M+ + N TL +L+
Sbjct: 61 LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSH----------LVTALLDMYVKCGNIRDARSV 303
A+ AL QG +H Y ++ + N + L TALLDMY KCG++ AR V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF-FPNHVTIASVLSASAQLGN 362
FD + + + V+W+A+I G+ +A LF F + +IAS L A A L +
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L MG +H+L + G+ D T N+L+ MYAK +I A +F+ + KD +++++++SG
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
N V PDA T+VS+I AC+ L A+Q G H +GL +S
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL-AS 359
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ AL++ YAKCG +R VF+ M ++ V+W+ MI GYG+ G G + ALF +M
Sbjct: 360 ETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMN 419
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
N P+ V F +LSACSH+G+V EG F+ M + P M+HY+CMVDLL+R G L
Sbjct: 420 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFL 479
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA EF+++MP+ DV ++ A L C +Y DLG+ + + + EL P+ +VL+SN+Y
Sbjct: 480 DEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIY 539
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
++ GR+ +VR + K +G KSPGCS ++++
Sbjct: 540 SAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEIN 572
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 145/514 (28%), Positives = 238/514 (46%), Gaps = 40/514 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+A H I GL D +T L+ MY + A +F +MP D ++ M+ Y +
Sbjct: 30 RAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARDLVAWNAMLAGYAHH 89
Query: 125 DLYKDIVEFYKCMR---KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV-------- 173
+Y V M+ RL+ + + + + +L + + +G VH +
Sbjct: 90 GMYHHAVAHLLSMQMQMHRLRPNASTLVA-LLPLLAQQGALAQGTSVHAYCIRACLHPNR 148
Query: 174 --KVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
K D +L T L+DMYAKC + +R+VFD +N V+W+++I G+V +
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208
Query: 231 LVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+LF M +G + ++ S + ACA L L G+ LH + K G+ + +LL
Sbjct: 209 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY K G I A ++FDE+ D VS++A++ GY Q+G ++A +F + + P+ T
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 328
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTS 408
+ S++ A + L L GR H I GL T I NAL+DMYAKC I +R +F
Sbjct: 329 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 388
Query: 409 EKDVIAWNSIISG--------------LDDN---VSPDAVTLVSVISACASLGAVQVGSS 451
+D+++WN++I+G L+ N PD VT + ++SAC+ G V G
Sbjct: 389 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKH 448
Query: 452 -LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGM 509
H GL + +++ ++ G A +M + V W A++G +
Sbjct: 449 WFHVMGHGYGLTPRMEHY-ICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALLGACRV 507
Query: 510 QG--DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
D G ++ L E N V+ + I SA
Sbjct: 508 YKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSA 541
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMP 107
++L+ C +L + H +I+ GL ++ CN L+ MY G + +R VF+ MP
Sbjct: 330 VSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA-LIDMYAKCGRIDLSRQVFNMMP 388
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ D S+ MI Y ++ L K+ + M D F +L AC + EG
Sbjct: 389 SRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVIEG 446
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 184/508 (36%), Positives = 304/508 (59%), Gaps = 22/508 (4%)
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE-GNQITLGSLVT 254
+G + VF T + +V++W SM+ +V ++ + L + M E ++ T SL+
Sbjct: 28 VGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
CA L GK LHG ++K + + ++ T LL+MY CG+++ AR +F+ + + V
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
WT+MI GY ++ P++AL L+ + F P+ VT+A+++SA A+L +L +G +HS
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 375 RLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------- 422
+ ++ V+ +ALV+MYAKC + AR +F+ S+KDV AW+++I G
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 423 -------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
N+ P+ VT+++VISACA LG ++ G +H Y T+ +V + +L++
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDM 326
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
++KCGD +A+ +FD+M K+ ++W++M+ G+ + G G +LA F M ++QP+E+ F
Sbjct: 327 FSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITF 386
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+L+ACSH G+V EG K FY + + +HY CMVDLL RAG L EA EF+ MP
Sbjct: 387 IGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP 446
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
++PD +++G+ L C +Y+ +LGE + +L+L P Y+L+SN+YA W V +
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKK 506
Query: 656 VRELMKQRGLSKSPGCSLVDLD-IANDF 682
VRELM ++G+ K+PGCS V +D IA+ F
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDNIAHSF 534
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/461 (32%), Positives = 257/461 (55%), Gaps = 27/461 (5%)
Query: 72 LIVDGLTNDKCN-TKLVSMYGSFGH--VKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
++V G + K + KL++ S G V YA SVF D ++ M+R + +++ +
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPR 60
Query: 129 DIVEFYKCMRKRLKE-HDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGL 186
++ Y M +R + D F F +LK C L + G +H ++VK + D ++ T L
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
++MYA C D+ S+R +F+ +N V WTSMI+GY++N C E L+L+ +M E ++
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+T+ +LV+ACA+L+ L G LH +I ++ ++I + L +AL++MY KCG+++ AR VFD+
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDK 240
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNM 365
L D+ +W+A+I GY ++ +AL+LF + ++ PN VTI +V+SA AQLG+L
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
GR VH R ++ N+L+DM++KC I A+ IF++ S KD+I+WNS+++G
Sbjct: 301 GRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFAL 360
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVGSSL-HAYSTKQGLLSSNV 466
++ PD +T + V++AC+ G VQ G L + G+ +
Sbjct: 361 HGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSE 420
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ G +++ + G AR M + + W +M+G
Sbjct: 421 HYG-CMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 209/656 (31%), Positives = 347/656 (52%), Gaps = 36/656 (5%)
Query: 50 IPCLN------LLGLC---KSTGSLKAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYA 99
+PCL+ +L C + S KA H ++ G D T L++ Y G K A
Sbjct: 44 VPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDA 103
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
++FD MP + S+ + + Y +D V Y + + E + VF+ LK L
Sbjct: 104 LNLFDEMPERNNVSYVTLTQGYAC----QDPVGLYSRLHREGHELNPHVFTSFLKLFVSL 159
Query: 160 RDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
+ +H IVK+G ++FV L++ Y+ C + S+R VF+ L K++V W ++
Sbjct: 160 DKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIV 219
Query: 219 AGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
+ YV+N C ++ L L +RM +GF+ N T + + A L A H K +HG ILK
Sbjct: 220 SCYVENGCFEDSLQLLSRMGMDGFMP-NNYTFDTALKASIGLGAFHFAKSVHGQILKTCY 278
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
E++ + LL +Y + G++ DA VF+E+ D+V W+ MI + Q+G+ +KA+ +F
Sbjct: 279 ELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIR 338
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHV 396
+ PN T++S+L+ A +G +H L +++G + D V NAL+D+YAKC
Sbjct: 339 MREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEK 398
Query: 397 IADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISA 439
+ A +F S K+V++WN++I G L + VS VT S + A
Sbjct: 399 MDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGA 458
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
CASL ++++G +H + K + V V +L++ YAKCGD + A+ VF+ M + +
Sbjct: 459 CASLASMELGVQVHGLAIKTN-NAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVAS 517
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+A+I GY G G +L +F M + +PN + F +LS CS+ G++ +G CF SM
Sbjct: 518 WNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMI 577
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
D P ++HY CMV L R+G+L++A+ +E +P EP V ++ A L +
Sbjct: 578 CDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFA 637
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+++L+++P YVL+SN+YA +W V +R+ MK++G+ K PG S ++
Sbjct: 638 RRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWIE 693
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 199/619 (32%), Positives = 327/619 (52%), Gaps = 22/619 (3%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N L++MYG AR VFD MP + S+ +I + N D + + M
Sbjct: 85 NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+ D F ++AC EL D+ G +VH +K G D V LV MY+K +
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTAC 256
+F+ DK+++SW S+IAG+ Q E L +F +M EG N+ GS AC
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRAC 264
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ + G+ +HG +K ++ + ++ +L DMY + N+ AR F + + DLVSW
Sbjct: 265 GAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWN 324
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+++ Y+ G +AL LF++ + + P+ +T+ +L A L GR++HS ++L
Sbjct: 325 SIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKL 384
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP------- 428
GL+ D +V N+L+ MYA+C ++ A +F ++DV+ WNSI++ + P
Sbjct: 385 GLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLF 444
Query: 429 ----------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
D ++L +V+SA A LG ++ +HAY+ K GL+ + T L++ YAK
Sbjct: 445 SLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNT-LIDTYAK 503
Query: 479 CGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
CG A +F+ M ++ +WS++I GY G +L LFS M + ++PN V F
Sbjct: 504 CGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEALDLFSRMRSLGIRPNHVTFIG 563
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+L+ACS G V EG + M ++ VP+ +H C+VDLLARAG+L EA F++ MP E
Sbjct: 564 VLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFE 623
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
PD+ ++ L +++ ++G+ + +L + P + YVL+ N+YA+ G W +++
Sbjct: 624 PDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLK 683
Query: 658 ELMKQRGLSKSPGCSLVDL 676
+ M+ G+ KSPG S V L
Sbjct: 684 KAMRTSGVKKSPGKSWVKL 702
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/498 (30%), Positives = 240/498 (48%), Gaps = 38/498 (7%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIV--KVGGPDSFVLTG-------LVDMYAKCRDIGSS 199
++ ++ AC LR + +G +VH +V PD+ L G L+ MY +C S+
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDA-QLAGNTVLGNHLITMYGRCAAPDSA 105
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
RQVFDE +N VSW S+IA +VQN A + L LF+ M +Q LGS V AC +L
Sbjct: 106 RQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTEL 165
Query: 260 RALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
+ G+ +H + LK E S L+ AL+ MY K G + D +F+ + DL+SW +
Sbjct: 166 GDVGTGRQVHAHALK--SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGS 223
Query: 318 MIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+I G+ Q G+ +AL++F PN S A +G+ G +H L I+
Sbjct: 224 IIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY 283
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GL-------- 422
L+ D V +L DMYA+ + AR F D+++WNSI++ GL
Sbjct: 284 RLDRDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLF 343
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
D + PD +T+ ++ AC A+ G +H+Y K G L +V V +LL+ YA+
Sbjct: 344 SEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLG-LDGDVSVCNSLLSMYAR 402
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
C D SA VF +++++ VTW++++ L LFS + E + + +
Sbjct: 403 CSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNV 462
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
LSA + G E K ++ V ++D A+ G L++A+ E M
Sbjct: 463 LSASAELGYF-EMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNR 521
Query: 599 DVSLFGAFLHGCGLYSRF 616
DV + + + G Y++F
Sbjct: 522 DVFSWSSLIVG---YAQF 536
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 201/641 (31%), Positives = 333/641 (51%), Gaps = 32/641 (4%)
Query: 37 LDQTFASFHSLPSIP------CLNLLGLCKSTGSLK---AFHALLIVDGLTNDK---CNT 84
L+ S LPS+P C L C + G + A H ++ G C
Sbjct: 41 LEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCAN 100
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L++MYG G + AR +FD MP + SF +++ + ++ ++ +R E
Sbjct: 101 VLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEV 160
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ FV + +LK + VH K+G ++FV +GL+D Y+ C + + VF
Sbjct: 161 NQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVF 220
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ + K+ V WT+M++ Y +NDC + +F++MR + N L S++ A L ++
Sbjct: 221 NGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVV 280
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +HG +K + H+ ALLDMY KCG+I+DAR F+ + D++ + MI Y
Sbjct: 281 LGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYA 340
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
QS ++A +LF + PN +++SVL A + L+ G+ +H+ I++G E D
Sbjct: 341 QSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLF 400
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NAL+D YAKC+ + + IF + + + ++WN+I+ G +
Sbjct: 401 VGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ 460
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ VT SV+ ACAS +++ +H S ++ +++ +G +L++ YAKCG + A
Sbjct: 461 MPCTQVTYSSVLRACASTASIRHAGQIHC-SIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 519
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF + E++ ++W+A+I GY + G +L LF M V+ N++ F +LS CS T
Sbjct: 520 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSST 579
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V G F SM D PSM+HY C+V LL RAGRL +AL+F+ ++P P ++ A
Sbjct: 580 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 639
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
L C ++ LG +K+LE+ P YVL+SN+YA+
Sbjct: 640 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAA 680
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/647 (31%), Positives = 327/647 (50%), Gaps = 26/647 (4%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPN 108
++L CK SL+ H L++ G ++D CN LVS+Y G++ A +F +M
Sbjct: 253 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA-LVSLYFHLGNLISAEHIFSNMSQ 311
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D ++ +I + +E +K M E D+ + ++ AC + G ++
Sbjct: 312 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 371
Query: 169 HCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H K+G + + G L+++YAKC DI ++ F ET +NVV W M+ Y D
Sbjct: 372 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 431
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ +F +M+ + NQ T S++ C +L L G+ +H I+K ++N+++ + L
Sbjct: 432 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 491
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY K G + A + D+VSWT MI GYTQ + DKAL F +
Sbjct: 492 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 551
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
V + + +SA A L L G+ +H+ G D NALV +Y++C I ++ FE
Sbjct: 552 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 611
Query: 407 TSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
T D IAWN+++SG + + + T S + A + ++ G
Sbjct: 612 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 671
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA TK G S V AL++ YAKCG A F + KN V+W+A+I Y
Sbjct: 672 KQVHAVITKTGY-DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 730
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L F M++ V+PN V +LSACSH G+V +G F SM ++ P +
Sbjct: 731 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 790
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HYVC+VD+L RAG L A EF++ MPI+PD ++ L C ++ ++GE +LEL
Sbjct: 791 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLEL 850
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P+ + YVL+SNLYA +W + R+ MK++G+ K PG S +++
Sbjct: 851 EPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 897
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 160/559 (28%), Positives = 271/559 (48%), Gaps = 30/559 (5%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L G K+ GSL + H+ ++ GL ++ C + KL Y G + A VFD MP
Sbjct: 51 LEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT 110
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC---CELRDIDEGMK 167
+++ MI+ +L ++ + M + FS VL+AC D+ E +
Sbjct: 111 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE--Q 168
Query: 168 VHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I+ G DS V+ L+D+Y++ + +R+VFD K+ SW +MI+G +N+C
Sbjct: 169 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 228
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E + LF M + S+++AC K+ +L G+ LHG +LK+G ++++ A
Sbjct: 229 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 288
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ +Y GN+ A +F + D V++ +I G +Q GY +KA++LF P+
Sbjct: 289 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 348
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFE 405
T+AS++ A + G L G+ +H+ +LG I AL+++YAKC I A F
Sbjct: 349 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 408
Query: 406 TTSEKDVIAWNSIISG---LDD--------------NVSPDAVTLVSVISACASLGAVQV 448
T ++V+ WN ++ LDD + P+ T S++ C LG +++
Sbjct: 409 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 468
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H+ K N YV + L++ YAK G +A + K+ V+W+ MI GY
Sbjct: 469 GEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
+L F ML+ ++ +EV T +SAC+ + EG + C F +
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 586
Query: 569 KHYVCMVDLLARAGRLEEA 587
+V L +R G++EE+
Sbjct: 587 PFQNALVTLYSRCGKIEES 605
>gi|413938143|gb|AFW72694.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 663
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 226/652 (34%), Positives = 336/652 (51%), Gaps = 34/652 (5%)
Query: 52 CLNLLGLCKSTGS------LKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
CL LL KS+ + HALL+ G + L+ Y + G A+++
Sbjct: 12 CLALLLRSKSSSTPLVPTTTAQLHALLLTSGHLHYDSPHLLLYSYCACGCPFDAQNLLAQ 71
Query: 106 MPNPDFYSF-QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
MP P S ++R Y ++ + Y MR D+ F+ KAC LR
Sbjct: 72 MPQPASVSVSNTLLRSYSGLGFHRQALALYSQMR----HFDHLTFTFAAKACAGLRLRRH 127
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G VH + G G D++V +V MY +CRD+ ++ VF + VSW ++I G V+
Sbjct: 128 GRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCVK 187
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ A+ L +F M + V ++ ++ S++ ACA+ R LH G+ +H + G+ +
Sbjct: 188 DGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAV 247
Query: 284 VTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWA 341
AL+DMY KCG++ DAR VFDE D+VSWT MI Y + + KA L ++ +
Sbjct: 248 KNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSS 307
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADA 400
+ PN VT+A +LSA A L + + H+L IRLGL D V ALVD YAKC +
Sbjct: 308 EAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVI 367
Query: 401 RYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASL 443
+ E S + WN+ ISG L ++V PD+ T+ SVI A A
Sbjct: 368 DMVVEKGSRR-TETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAES 426
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
+ +++H +G L S + T L++ YAK GD A +F + EK+ V W+ +
Sbjct: 427 ADLVQANNIHCCLLVRGCLVST-DIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTV 485
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I GYGM G ++ L+S M+ V PN V ++L +CSH GMV EG + F M
Sbjct: 486 IAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHG 545
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+P+ +HY+C+VD+L RAGR+EEA +E+MP EP VS++ + L C L+ + GEV
Sbjct: 546 LMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAA 605
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
K + EL PD YVL+ +YA+ RW V +R +M+ L K PG +VD
Sbjct: 606 KHLFELEPDNVGNYVLLGKVYAAAERWSDVQHLRRVMEGMDLHKDPGYCVVD 657
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 333/629 (52%), Gaps = 22/629 (3%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H+ +I G D T LV +Y G + AR VFD + ++ +I Y +
Sbjct: 165 HSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRS 224
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGL 186
+ ++ + M + D +V S +L AC L + G ++H +++ D L
Sbjct: 225 EVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVL 284
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+D Y KC + + + +FD KN++SWT+MIAGY+QN E + L M + ++
Sbjct: 285 IDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDE 344
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
S++T+C + AL G+ +H Y++K+ +E ++ + AL+DMY KC + DA+ VFD
Sbjct: 345 YACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDV 404
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ +V + AMI GY++ GY AL++F + + P+ +T S+L SA L L +
Sbjct: 405 VTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLS 464
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ +H L I+ G D +AL+D+Y+KC I DARY+FE T+ KD++ WNS+ SG +
Sbjct: 465 KQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQ 524
Query: 426 VS-----------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ P+ T ++ +A + L ++ G H K G L S+ ++
Sbjct: 525 LKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMG-LESDPFI 583
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
AL++ YAKCG + A +F + K+T W++MI Y G +L +F M++ +
Sbjct: 584 TNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNI 643
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
PN V F ++LSACSH G V +G + + SM R + P ++HY +V LL RAGRL EA
Sbjct: 644 NPNYVTFVSVLSACSHVGFVEDGLQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAR 702
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF+E M I P ++ + L C ++ +L + + + + P + YV++SN++AS G
Sbjct: 703 EFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKG 762
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
W V ++R M G+ K PG S ++++
Sbjct: 763 MWGDVKRLRLKMDVNGVVKEPGQSWIEVN 791
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 187/659 (28%), Positives = 323/659 (49%), Gaps = 61/659 (9%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
KS + H +++ GL D + L+ Y G V A ++FD MPN + S+ ++
Sbjct: 54 KSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVV 113
Query: 119 RWYF-LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
Y L K ++ F + R + + + ++ + +++AC + + G +VH ++K G
Sbjct: 114 SMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGF 173
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
G D +V T LV +YAK +I +R VFD + K V+WT++I GY ++ ++ L LFN
Sbjct: 174 GEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNL 233
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M E V ++ L S++ AC+ L L GK +H Y+L+ +++ L+D Y KCG
Sbjct: 234 MMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGR 293
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
++ +++FD L +++SWT MI GY Q+ Y +A++L + + P+ +SVL++
Sbjct: 294 VKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTS 353
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ L GR +HS I++ LE D V NAL+DMY+KC+ + DA+ +F+ + V+ +
Sbjct: 354 CGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYY 413
Query: 416 NSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
N++I G +VSP +T VS++ A+L +Q+ +H K
Sbjct: 414 NAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIK 473
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G S + + +AL++ Y+KC + AR VF+ K+ V W+++ GY +Q +
Sbjct: 474 YG-FSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFK 532
Query: 519 LFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWKC----------FYS 557
L+SD+ +PNE F + +A S H ++ G + Y+
Sbjct: 533 LYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYA 592
Query: 558 MCRDFK-----FVPSM-KHYVC---MVDLLARAGRLEEALEFMENM---PIEPDVSLFGA 605
C + F S+ K C M+ + A+ G++EEAL E M I P+ F +
Sbjct: 593 KCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVS 652
Query: 606 FLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
L C + G M + P Y +V+ L GR R+ + RE +++
Sbjct: 653 VLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLL----GRAGRLTEAREFIEK 707
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 191/403 (47%), Gaps = 60/403 (14%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L +L+ A +++ + +H ++ G++ + L LL Y K G++ DA ++FD++
Sbjct: 43 LANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMP 102
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ +LVSW++++ YTQ GY +KAL F + + D N +AS++ A Q G
Sbjct: 103 NRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKL-NEYILASIIRACVQRDGGEPG 161
Query: 367 RMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
VHS I+ G ED V +LV +YAK I AR +F+ K + W +II+G
Sbjct: 162 SQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKS 221
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAY----STKQGLLSS 464
++ NV PD L S+++AC+ LG ++ G +HAY TK + +
Sbjct: 222 GRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTY 281
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
NV L++FY KCG ++ + +FD + KN ++W+ MI GY ++ L +M
Sbjct: 282 NV-----LIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMF 336
Query: 525 NEEVQPNEVIFTTILSAC---------------------SHTGMVGEGWKCFYSMC---- 559
+P+E +++L++C H V YS C
Sbjct: 337 RMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALD 396
Query: 560 ---RDFKFVP--SMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
R F V S+ +Y M++ +R G L ALE + M ++
Sbjct: 397 DAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLK 439
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 207/647 (31%), Positives = 327/647 (50%), Gaps = 26/647 (4%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPN 108
++L CK SL+ H L++ G ++D CN LVS+Y G++ A +F +M
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA-LVSLYFHLGNLISAEHIFSNMSQ 351
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D ++ +I + +E +K M E D+ + ++ AC + G ++
Sbjct: 352 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 169 HCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H K+G + + G L+++YAKC DI ++ F ET +NVV W M+ Y D
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ +F +M+ + NQ T S++ C +L L G+ +H I+K ++N+++ + L
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY K G + A + D+VSWT MI GYTQ + DKAL F +
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 591
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
V + + +SA A L L G+ +H+ G D NALV +Y++C I ++ FE
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 407 TSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
T D IAWN+++SG + + + T S + A + ++ G
Sbjct: 652 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA TK G S V AL++ YAKCG A F + KN V+W+A+I Y
Sbjct: 712 KQVHAVITKTGY-DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L F M++ V+PN V +LSACSH G+V +G F SM ++ P +
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HYVC+VD+L RAG L A EF++ MPI+PD ++ L C ++ ++GE +LEL
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLEL 890
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P+ + YVL+SNLYA +W + R+ MK++G+ K PG S +++
Sbjct: 891 EPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 160/559 (28%), Positives = 271/559 (48%), Gaps = 30/559 (5%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L G K+ GSL + H+ ++ GL ++ C + KL Y G + A VFD MP
Sbjct: 91 LEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT 150
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC---CELRDIDEGMK 167
+++ MI+ +L ++ + M + FS VL+AC D+ E +
Sbjct: 151 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE--Q 208
Query: 168 VHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I+ G DS V+ L+D+Y++ + +R+VFD K+ SW +MI+G +N+C
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E + LF M + S+++AC K+ +L G+ LHG +LK+G ++++ A
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ +Y GN+ A +F + D V++ +I G +Q GY +KA++LF P+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFE 405
T+AS++ A + G L G+ +H+ +LG I AL+++YAKC I A F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 406 TTSEKDVIAWNSIISG---LDD--------------NVSPDAVTLVSVISACASLGAVQV 448
T ++V+ WN ++ LDD + P+ T S++ C LG +++
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H+ K N YV + L++ YAK G +A + K+ V+W+ MI GY
Sbjct: 509 GEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
+L F ML+ ++ +EV T +SAC+ + EG + C F +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 626
Query: 569 KHYVCMVDLLARAGRLEEA 587
+V L +R G++EE+
Sbjct: 627 PFQNALVTLYSRCGKIEES 645
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 186/564 (32%), Positives = 314/564 (55%), Gaps = 54/564 (9%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVD---MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H +++K G ++ + L+ L++ + + + VFD + N++ W +M G+
Sbjct: 21 IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHAL 80
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ L L+ M + N T L+ ACAK +A +G+ +HG++LK+G +++ ++
Sbjct: 81 SSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYV 140
Query: 284 VTALLDMYVKCGNIRDARSVFD-------------------------------ELCSIDL 312
T+L+ MYVK G DAR VFD E+ D+
Sbjct: 141 HTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDV 200
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW A+I GY ++G +AL+LF + + P+ T+ +VLSA AQ ++ +GR VHS
Sbjct: 201 VSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSW 260
Query: 373 GIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
G + ++NAL+D+Y KC + A +FE S KDVI+WN++I G
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ-GLLSSNVYVGTALL 473
L SP+ VT++S++ ACA LGA+ +G +H Y K+ +S+ + T+L+
Sbjct: 321 LLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLI 380
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ YAKCGD ++A+ VFD+M ++ +W+AMI G+ M G + +FS M + ++P+++
Sbjct: 381 DMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDI 440
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +LSACSH+GM+ G F SM D+K P ++HY CM+DLL +G +EA E + +
Sbjct: 441 TFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINS 500
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M ++PD ++ + L C ++ +LGE + ++++ P + YVL+SN+YA+ GRW V
Sbjct: 501 MEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEV 560
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+ R L+ +G+ K PGCS +++D
Sbjct: 561 AKRRALLNDKGMKKVPGCSSIEID 584
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 172/597 (28%), Positives = 284/597 (47%), Gaps = 102/597 (17%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTN-DKCNTKLVS---MYGSFGHVKYARSVFDSM 106
P L+LL CK+ SL+ HA +I GL N + +KL+ + F + YA SVFDS+
Sbjct: 4 PSLSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSI 63
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P+ + M R + L+ + Y CM +++ F +LKAC + + EG
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQ 123
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKC---------------RD--------------- 195
++H ++K+G D +V T L+ MY K RD
Sbjct: 124 QIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNG 183
Query: 196 -IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
I S++++FDE K+VVSW ++I+GY + +E L LF M + V+ ++ T+ ++++
Sbjct: 184 YIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLS 243
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
ACA+ ++ G+ +H +I G N +V AL+D+Y+KCG + A +F+ L D++S
Sbjct: 244 ACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVIS 303
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LG 373
W +I GYT +AL LF + + PN VT+ S+L A A LG +++GR +H +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYID 363
Query: 374 IRL-GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
RL G+ + + + +L+DMYAKC I A+ +F++ + + +WN++I G
Sbjct: 364 KRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPA 423
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
D + PD +T V ++SAC+ G + +G
Sbjct: 424 FDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLG------------------------- 458
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF---SDMLNE-EVQP 530
R +F +M E +T + YG D G LF +M+N E+ P
Sbjct: 459 -----------RHIFRSMTEDYKIT--PKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDP 505
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEE 586
+ VI+ ++L AC G V G ++ K P + YV + ++ A AGR E
Sbjct: 506 DGVIWCSLLKACKMHGNVELGESFAQNL---IKIEPKNSGSYVLLSNIYATAGRWNE 559
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 13/181 (7%)
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS---ARMVFD 490
+S++ C +L ++++ +HA K GL ++N Y + L+ F A VFD
Sbjct: 6 LSLLHNCKTLQSLRI---IHAKMIKTGLHNTN-YALSKLIEFSVLSPHFDGLTYAISVFD 61
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
+++E N + W+ M G+ + D +L L+ M++ + PN F +L AC+ + E
Sbjct: 62 SIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFRE 121
Query: 551 GWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
G + + K + YV ++ + + GR E+A + + DV + A +
Sbjct: 122 GQQIHGHV---LKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSS-HRDVVSYTALIK 177
Query: 609 G 609
G
Sbjct: 178 G 178
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/521 (36%), Positives = 296/521 (56%), Gaps = 26/521 (4%)
Query: 186 LVDMYAKCR----DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EG 240
L++M +C D +R +F + N+ W +MI G V NDC + + + MR EG
Sbjct: 48 LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG 107
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
F+ N T ++ ACA+L L G +H ++K G + + + T+L+ +Y KCG + DA
Sbjct: 108 FLP-NNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDA 166
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
VFD++ ++VSWTA+I GY G +A+ +F + P+ TI VLSA QL
Sbjct: 167 HKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQL 226
Query: 361 GNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
G+LN G +H + +G+ + V +LVDMYAKC + AR +F+ EKD+++W ++I
Sbjct: 227 GDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMI 286
Query: 420 SGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
G +NV PD T+V V+SACA LGA+++G + + L
Sbjct: 287 QGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFL 346
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ V +GTAL++ YAKCG A VF M+EK+ V W+A+I G M G S LF
Sbjct: 347 YNPV-LGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQ 405
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
+ ++P+ F +L C+H G+V EG + F SM R F PS++HY CMVDLL RAG
Sbjct: 406 VEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAG 465
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
L+EA + + NMP+E + ++GA L C ++ L E+ +K+++EL P + YVL+SN
Sbjct: 466 LLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSN 525
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD-IANDF 682
+Y+++ +W +VR M ++ + K PGCS +++D I ++F
Sbjct: 526 IYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEF 566
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 159/473 (33%), Positives = 247/473 (52%), Gaps = 26/473 (5%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
F Y R +F + P+ + + MIR ND + D +EFY MR +NF F V
Sbjct: 59 FSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFV 118
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
LKAC L D+ G+K+H +VK G D FV T LV +YAKC + + +VFD+ DKNV
Sbjct: 119 LKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNV 178
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
VSWT++I+GY+ +E + +F R+ E + + T+ +++AC +L L+ G+W+H
Sbjct: 179 VSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKC 238
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
I+++G+ N + T+L+DMY KCGN+ ARSVFD + D+VSW AMI GY +G P +A
Sbjct: 239 IMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEA 298
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDM 390
+ LF + + P+ T+ VLSA A+LG L +G V L R L + + AL+D+
Sbjct: 299 IDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDL 358
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTL 433
YAKC ++ A +F+ EKD + WN+IISGL N + PD T
Sbjct: 359 YAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTF 418
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+ ++ C G V G + L+ ++ +++ + G A + M
Sbjct: 419 IGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMP 478
Query: 494 -EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP----NEVIFTTILSA 541
E N + W A++G + D + ++ E++P N V+ + I SA
Sbjct: 479 MEANAIVWGALLGACRIHRDTQLAELALKQLI--ELEPWNSGNYVLLSNIYSA 529
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 211/636 (33%), Positives = 343/636 (53%), Gaps = 29/636 (4%)
Query: 66 KAFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYF 122
+A H L+ + T+ L++MY G V+ AR VFD M D S+ M
Sbjct: 60 RALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAMASCLA 119
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC--ELRDIDEGMKVHCEIVKVG--GP 178
N ++ + M + + F +AC EL + G+ V ++K G G
Sbjct: 120 RNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV-VLGFVLKTGFWGT 178
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D V L+DM+A+ D+ ++++VFD +++ V WT +I YVQ CA + + LF M
Sbjct: 179 DVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHML 238
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG--- 295
+ E + ++ S+++AC +L ++ G+ LH L++G+ +S + L+DMY K
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMER 298
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK-ALKLFTDKKWADFFPNHVTIASVL 354
++ AR VF + +++SWTA+I GY QSG + + LF + PNH+T +++L
Sbjct: 299 SMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLL 358
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVI 413
A A L + + GR +H+ ++ + V+ NALV MYA+ + +AR F+ E +++
Sbjct: 359 KACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNIL 418
Query: 414 AWN-------------SIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+ + S I G+DD VS T S++SA AS+G + G LHA S K G
Sbjct: 419 SMSPDVETERNNASCSSKIEGMDDGVS--TFTFASLLSAAASVGLLTKGQKLHALSMKAG 476
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
S+ + +L++ YA+CG + A FD M++ N ++W+++I G G +L++F
Sbjct: 477 F-RSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMF 535
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
DM+ V+PN+V + +LSACSH G+V EG + F SM +D +P M+HY C+VDLLAR
Sbjct: 536 HDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLAR 595
Query: 581 AGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
+G +EEA +F+ MP + D ++ L C Y ++GE+ ++ L P YVL+
Sbjct: 596 SGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLL 655
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
SNLYA G W V ++R LM+ + LSK G S +D+
Sbjct: 656 SNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDV 691
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 237/473 (50%), Gaps = 37/473 (7%)
Query: 150 SKVLKACCELRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+K+L + D+ G +H +++ + D+ V L+ MY+KC + ++R+VFD+
Sbjct: 44 AKLLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMC 103
Query: 208 D-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC--AKLRALHQ 264
+++VSWT+M + +N +E L L M E + N TL + AC +L L
Sbjct: 104 GVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAG 163
Query: 265 GKWLHGYILKIGI-EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G L G++LK G + + AL+DM+ + G++ A+ VFD L V WT +I Y
Sbjct: 164 GVVL-GFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYV 222
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYT 382
Q+G K ++LF F P+ +++S++SA +LG++ +G+ +HS+ +RLGL D
Sbjct: 223 QAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSC 282
Query: 383 VINALVDMYAKCHV---IADARYIFETTSEKDVIAWNSIISG------------------ 421
V LVDMYAK + + AR +F+T +V++W ++ISG
Sbjct: 283 VSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREM 342
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
L++++ P+ +T +++ ACA+L G +HA+ K + NV VG AL++ YA+ G
Sbjct: 343 LNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNV-VGNALVSMYAESGC 401
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ AR FD + E N ++ S + + D + + F ++LSA
Sbjct: 402 MEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGV------STFTFASLLSA 455
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ G++ +G K +++ F +V + AR G LE+A + M
Sbjct: 456 AASVGLLTKGQK-LHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEM 507
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
L + S DA L +++ A G +++G +LH + +L ++ V +LL Y+KCG
Sbjct: 35 LSSDHSCDAAKL---LTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGA 91
Query: 482 AQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
++AR VFD M ++ V+W+AM G SL L +ML ++PN
Sbjct: 92 VEAARRVFDQMCGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAAR 151
Query: 541 AC 542
AC
Sbjct: 152 AC 153
Score = 38.9 bits (89), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 7/174 (4%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+LL S G L + HAL + G +D+ + LVSMY G+++ A FD M +
Sbjct: 451 SLLSAAASVGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDH 510
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ +I + K + + M + ++ + VL AC + + EG +
Sbjct: 511 NVISWTSIISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHF 570
Query: 170 CEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-NVVSWTSMIAG 220
+ K G P +VD+ A+ + +RQ +E K + + W ++++
Sbjct: 571 RSMQKDHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSA 624
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/565 (32%), Positives = 317/565 (56%), Gaps = 56/565 (9%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVD---MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H +++K G ++ + L+ L++ + + + VF+ + N++ W +M G+
Sbjct: 6 IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ L L+ M + N T L+ +CAK +A +G+ +HG++LK+G +++ ++
Sbjct: 66 SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125
Query: 284 VTALLDMYVKCGNIRDARSVFD-------------------------------ELCSIDL 312
T+L+ MYV+ G + DAR VFD E+ D+
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW AMI GY ++G +AL+LF + + P+ T+ SV+SA AQ ++ +GR VHS
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245
Query: 373 GIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
G + ++NAL+D+Y KC + A +FE S KDVI+WN++I G
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK--QGLLSSNVYVGTAL 472
L SP+ VT++S++ ACA LGA+++G +H Y K +G+ +++ + T+L
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH-RTSL 364
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
++ YAKCGD ++A+ VFD++ ++ +W+AMI G+ M G + +FS M E++P++
Sbjct: 365 IDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDD 424
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
+ F +LSACSH+GM+ G F SM D+K P ++HY CM+DLL +G +EA E +
Sbjct: 425 ITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMIN 484
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
M +EPD ++ + L C ++ +LGE + ++++ P YVL+SN+YA+ GRW
Sbjct: 485 TMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNE 544
Query: 653 VNQVRELMKQRGLSKSPGCSLVDLD 677
V ++R L+ +G+ K PGCS +++D
Sbjct: 545 VAKIRALLNDKGMKKVPGCSSIEID 569
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 163/586 (27%), Positives = 270/586 (46%), Gaps = 106/586 (18%)
Query: 64 SLKAFHALLIVDGLTN-DKCNTKLVS---MYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
SL+ HA +I GL N + +KL+ + F + YA SVF+++ P+ + M R
Sbjct: 2 SLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFR 61
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GP 178
+ L+ + Y CM + + F +LK+C + + EG ++H ++K+G
Sbjct: 62 GHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDL 121
Query: 179 DSFVLTGLVDMYAKC---------------RD----------------IGSSRQVFDETL 207
D +V T L+ MY + RD I S++++FDE
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
K+VVSW +MI+GY + +E L LF M + V ++ T+ S+V+ACA+ ++ G+
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H +I G N +V AL+D+Y+KCG + A +F+ L D++SW +I GYT
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA- 386
+AL LF + + PN VT+ S+L A A LG + +GR +H + + V NA
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH---VYINKRLKGVANAS 358
Query: 387 -----LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DD 424
L+DMYAKC I A+ +F++ + + +WN++I G +
Sbjct: 359 SHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKN 418
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ PD +T V ++SAC+ G + +G
Sbjct: 419 EIEPDDITFVGLLSACSHSGMLDLG----------------------------------- 443
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF---SDMLNE-EVQPNEVIFTTILS 540
R +F +M+E +T + YG D G LF +M+N E++P+ VI+ ++L
Sbjct: 444 -RHIFRSMKEDYKIT--PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLK 500
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
AC G V G ++ + P YV + ++ A AGR E
Sbjct: 501 ACKMHGNVELGESYAQNLIKIEPKNPG--SYVLLSNIYATAGRWNE 544
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 217/653 (33%), Positives = 341/653 (52%), Gaps = 30/653 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
L LG+ + + + LL+ DG + + LV MY G+V+ A VF+ MP D
Sbjct: 124 LGALGVGAAVHAYCVRYGLLVGDG-DSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVV 182
Query: 113 SFQVMIRWYFLN----DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
++ +I N + + +VE + ++ L+AC L +++ G +
Sbjct: 183 AWTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCL 242
Query: 169 HCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +VKVG DS V++ L MY+KC + +F E +K+VVSWTS+I Y +
Sbjct: 243 HGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLI 302
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E + LF +M E ++ ++I + +++ +H GK H I K + + AL
Sbjct: 303 TEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNAL 362
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD---FF 344
+ MY K + A VF L D SW M+VGY ++G K L+L+ + + D F+
Sbjct: 363 ISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFW 422
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYI 403
++ S +S+ ++L L +GR H I+ L ED +V N L+ MY +C A I
Sbjct: 423 CVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKI 482
Query: 404 FETTSEK-DVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
F K DV+ WN++IS L + ++P++ TL++VISACA+L A
Sbjct: 483 FGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVA 542
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
++ G +H+Y + G +V + TAL++ YAKCG AR +FD+M + + V W+ MI
Sbjct: 543 LERGEKIHSYVKEMGW-DYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMIS 601
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GYGM G+ +L LF M ++PN V F ILSA H+G++ EG K F M + +
Sbjct: 602 GYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGK-YSLE 660
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P++KHY CMVDLL ++G L+EA + + MPIEPD ++G L C L+ F++G + KK
Sbjct: 661 PNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAKK 720
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDI 678
P+ YY+L+SN Y +W + ++RE MK G+ K G S VD +
Sbjct: 721 AFASDPENEGYYILISNSYGGAKKWDEIEKLRETMKNLGVQKGVGWSAVDYGV 773
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 173/609 (28%), Positives = 292/609 (47%), Gaps = 37/609 (6%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HAL + GL KLVS Y S G A F + P PD + + +IR + +
Sbjct: 33 HALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASDF 92
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-----GPDSFV 182
+ ++ M F A EL + G VH V+ G G V
Sbjct: 93 VAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVAV 152
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM----R 238
+ LV MYA+C ++ + +VF+E +++VV+WT++I+G V+N + EGL M
Sbjct: 153 ASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAG 212
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+G V N T+ S + AC L L+ G+ LHGY++K+GI + +++AL MY KC +
Sbjct: 213 DGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTE 272
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DA ++F EL D+VSWT++I Y + G +A++LF + P+ + ++ VLS
Sbjct: 273 DACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLG 332
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
GN++ G+ H++ + D +I NAL+ MY K ++ A +F ++D +WN
Sbjct: 333 NNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNL 392
Query: 418 IISG------------------LDDNVSPDAV--TLVSVISACASLGAVQVGSSLHAYST 457
++ G L D V +LVS IS+C+ L +++G S H YS
Sbjct: 393 MVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSI 452
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGS 516
K LL + V L+ Y +CG A +F + K + VTW+ +I Y G +
Sbjct: 453 KH-LLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAA 511
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
++L+ ML E + PN T++SAC++ + G K +S ++ + + ++D
Sbjct: 512 MSLYDQMLIEGLTPNSTTLITVISACANLVALERGEK-IHSYVKEMGWDYDVSINTALID 570
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKA 634
+ A+ G+L A ++M ++ DV + + G G++ + KM + P+
Sbjct: 571 MYAKCGQLGIARRIFDSM-LQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGV 629
Query: 635 CYYVLVSNL 643
+ ++S L
Sbjct: 630 TFLAILSAL 638
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 149/323 (46%), Gaps = 28/323 (8%)
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H + G+ L L+ Y G A F D W ++I + +
Sbjct: 32 VHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASD 91
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-----EDYT 382
AL + P+ T SASA+LG L +G VH+ +R GL +
Sbjct: 92 FVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVA 151
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------------- 422
V ++LV MYA+C + DA +FE E+DV+AW ++ISG
Sbjct: 152 VASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLA 211
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
D +V P++ T+ S + AC L + G LH Y K G+ S + + +AL + Y+KC
Sbjct: 212 GDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVI-SALFSMYSKCYS 270
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ A +F + EK+ V+W+++IG Y +G ++ LF M+ +QP+E++ + +LS
Sbjct: 271 TEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSG 330
Query: 542 CSHTGMVGEGWKCFYSMCRDFKF 564
+ G V G K F+++ F
Sbjct: 331 LGNNGNV-HGGKTFHAVITKRNF 352
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 124/301 (41%), Gaps = 58/301 (19%)
Query: 369 VHSLGIRLGLEDYTVINA-LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------ 421
VH+L + GL + A LV Y+ A F + D WNS+I
Sbjct: 32 VHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASD 91
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL---SSNVY 467
L P T SA A LGA+ VG+++HAY + GLL +V
Sbjct: 92 FVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVA 151
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML--- 524
V ++L+ YA+CG+ + A VF+ M E++ V W+A+I G G+ G L +M+
Sbjct: 152 VASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLA 211
Query: 525 -NEEVQPNEVIFTTILSACS-----HTGMVGEGW---------------------KCFYS 557
+ V+PN + L AC ++G G+ KC+ +
Sbjct: 212 GDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYST 271
Query: 558 --MCRDFKFVPS--MKHYVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGC 610
C F +P + + ++ + R G + EA+E + M ++PD L L G
Sbjct: 272 EDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGL 331
Query: 611 G 611
G
Sbjct: 332 G 332
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/619 (33%), Positives = 335/619 (54%), Gaps = 28/619 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ LV MY G V+ A +FD MP D ++ +I N + + + M + +
Sbjct: 149 SSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGD 208
Query: 144 HDNFVFSKV----LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
S+ L+AC L ++ G +H VK G G V++ L MY KC
Sbjct: 209 GGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTED 268
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R +F E +K++VSWTS+I Y + A++ + LF M E ++ +++ + L+
Sbjct: 269 ARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGN 328
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ GK H I++ + + AL+ MY KC + A +VF L D SW++M
Sbjct: 329 DAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSM 388
Query: 319 IVGYTQSGYPDKALKLFTDKKWAD---FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+V Y ++G K L+L+ + ++ D F + ++ S++S+ ++LG L +G+ H I+
Sbjct: 389 VVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIK 448
Query: 376 -LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
L E+ +V NAL+ MY +C AR IF KDV+ W+++IS
Sbjct: 449 HLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLL 508
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
L + V P++ TLVSVIS+CA+L A++ G +H++ GL ++ + TAL++ Y
Sbjct: 509 YDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL-ECDLSICTALVDMYM 567
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG AR +FD+M E++ VTW+ MI GYGM G+ +L LFS M V+PN + F
Sbjct: 568 KCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLA 627
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
ILSAC H G+V +G + F M ++ P++KHY CMVDLL ++G L+EA + + MPIE
Sbjct: 628 ILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIE 686
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
PD ++G L C ++ F++G + KK P+ YY+L+SN Y S +W + ++R
Sbjct: 687 PDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLR 746
Query: 658 ELMKQRGLSKSPGCSLVDL 676
++MK G+ KS G S +D+
Sbjct: 747 DMMKNHGVEKSIGWSTIDI 765
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 287/576 (49%), Gaps = 33/576 (5%)
Query: 68 FHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HAL + GL+ KLVS Y S G A F + P PD + + ++R
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSF-V 182
+ + ++ MR F V A EL + G VH V+ G G S V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM----R 238
+ LV MYA+C + + ++FDE +++VV+WT++I+G V N EGL RM
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+G N T+ S + AC L L G LHG+ +K G+ +V++L MY KC +
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DAR +F EL DLVSWT++I Y ++G+ +KA++LF + + P+ V I+ +L+
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ G+ H+ +R D +I NAL+ MYAKC + A +F ++D +W+S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387
Query: 418 II-----SGLD---------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
++ +GLD D D +L+S+IS+C+ LG +++G S H YS
Sbjct: 388 MVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSI 447
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K L N V AL++ Y +CG+ AR +F ++ K+ VTWSA+I Y G +L
Sbjct: 448 KH-LAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDAL 506
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
L+ ML E V+PN +++S+C++ + G + +S +D + +VD+
Sbjct: 507 LLYDQMLTEGVKPNSATLVSVISSCANLAALEHG-ELIHSHVKDVGLECDLSICTALVDM 565
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
+ G+L A + ++M +E DV + + G G++
Sbjct: 566 YMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH 600
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 184/361 (50%), Gaps = 7/361 (1%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K FHA ++ + L+SMY V A +VF + D S+ M+ Y
Sbjct: 336 KTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKA 395
Query: 125 DLYKDIVEFYKCMRKRLK---EHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDS 180
L +E Y+ M+ R K E+D ++ +C L + G HC +K + G +S
Sbjct: 396 GLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENS 455
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
V L+ MY +C + +R++F K+VV+W+++I+ Y +++ L+L+++M
Sbjct: 456 SVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTE 515
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V+ N TL S++++CA L AL G+ +H ++ +G+E + + TAL+DMY+KCG + A
Sbjct: 516 GVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIA 575
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
R +FD + D+V+W MI GY G +ALKLF+ + + PN +T ++LSA
Sbjct: 576 RKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHA 635
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSI 418
G ++ GR + + LE + +VD+ K + +A + E D W ++
Sbjct: 636 GLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTL 695
Query: 419 I 419
+
Sbjct: 696 L 696
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/619 (33%), Positives = 335/619 (54%), Gaps = 28/619 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ LV MY G V+ A +FD MP D ++ +I N + + + M + +
Sbjct: 149 SSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGD 208
Query: 144 HDNFVFSKV----LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
S+ L+AC L ++ G +H VK G G V++ L MY KC
Sbjct: 209 GGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTED 268
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R +F E +K++VSWTS+I Y + A++ + LF M E ++ +++ + L+
Sbjct: 269 ARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGN 328
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ GK H I++ + + AL+ MY KC + A +VF L D SW++M
Sbjct: 329 DAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSM 388
Query: 319 IVGYTQSGYPDKALKLFTDKKWAD---FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+V Y ++G K L+L+ + ++ D F + ++ S++S+ ++LG L +G+ H I+
Sbjct: 389 VVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIK 448
Query: 376 -LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
L E+ +V NAL+ MY +C AR IF KDV+ W+++IS
Sbjct: 449 HLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLL 508
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
L + V P++ TLVSVIS+CA+L A++ G +H++ GL ++ + TAL++ Y
Sbjct: 509 YDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL-ECDLSICTALVDMYM 567
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG AR +FD+M E++ VTW+ MI GYGM G+ +L LFS M V+PN + F
Sbjct: 568 KCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLA 627
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
ILSAC H G+V +G + F M ++ P++KHY CMVDLL ++G L+EA + + MPIE
Sbjct: 628 ILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIE 686
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
PD ++G L C ++ F++G + KK P+ YY+L+SN Y S +W + ++R
Sbjct: 687 PDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLR 746
Query: 658 ELMKQRGLSKSPGCSLVDL 676
++MK G+ KS G S +D+
Sbjct: 747 DMMKNHGVEKSIGWSTIDI 765
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 287/576 (49%), Gaps = 33/576 (5%)
Query: 68 FHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HAL + GL+ KLVS Y S G A F + P PD + + ++R
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSF-V 182
+ + ++ MR F V A EL + G VH V+ G G S V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM----R 238
+ LV MYA+C + + ++FDE +++VV+WT++I+G V N EGL RM
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+G N T+ S + AC L L G LHG+ +K G+ +V++L MY KC +
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DAR +F EL DLVSWT++I Y ++G+ +KA++LF + + P+ V I+ +L+
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ G+ H+ +R D +I NAL+ MYAKC + A +F ++D +W+S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387
Query: 418 II-----SGLD---------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
++ +GLD D D +L+S+IS+C+ LG +++G S H YS
Sbjct: 388 MVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSI 447
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K L N V AL++ Y +CG+ AR +F ++ K+ VTWSA+I Y G +L
Sbjct: 448 KH-LAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDAL 506
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
L+ ML E V+PN +++S+C++ + G + +S +D + +VD+
Sbjct: 507 LLYDQMLTEGVKPNSATLVSVISSCANLAALEHG-ELIHSHVKDVGLECDLSICTALVDM 565
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
+ G+L A + ++M +E DV + + G G++
Sbjct: 566 YMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH 600
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 184/361 (50%), Gaps = 7/361 (1%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K FHA ++ + L+SMY V A +VF + D S+ M+ Y
Sbjct: 336 KTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKA 395
Query: 125 DLYKDIVEFYKCMRKRLK---EHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDS 180
L +E Y+ M+ R K E+D ++ +C L + G HC +K + G +S
Sbjct: 396 GLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENS 455
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
V L+ MY +C + +R++F K+VV+W+++I+ Y +++ L+L+++M
Sbjct: 456 SVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTE 515
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V+ N TL S++++CA L AL G+ +H ++ +G+E + + TAL+DMY+KCG + A
Sbjct: 516 GVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIA 575
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
R +FD + D+V+W MI GY G +ALKLF+ + + PN +T ++LSA
Sbjct: 576 RKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHA 635
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSI 418
G ++ GR + + LE + +VD+ K + +A + E D W ++
Sbjct: 636 GLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTL 695
Query: 419 I 419
+
Sbjct: 696 L 696
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/634 (32%), Positives = 317/634 (50%), Gaps = 53/634 (8%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
K H L++ G +++ CN LV++Y G++ A +F M D S+ +I
Sbjct: 271 KQLHGLVLKQGFSSETYVCNA-LVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL 183
+ +K M ++ D + +L AC + + G + H +K G V+
Sbjct: 330 QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVV 389
Query: 184 TG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGF 241
G L+D+Y KC DI ++ + F Y Q D + +F +M+ EG
Sbjct: 390 EGSLLDLYVKCSDIKTAHEFF---------------LCYGQLDNLNKSFQIFTQMQIEGI 434
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V NQ T S++ C L A G+ +H +LK G + N ++ + L+DMY K G + A
Sbjct: 435 VP-NQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHAL 493
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+F L D+VSWTAMI GYTQ +AL LF + + +++ AS +SA A +
Sbjct: 494 KIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQ 553
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L+ GR +H+ G +D ++ NALV +YA+C + +A F+ KD ++WNS++S
Sbjct: 554 ALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVS 613
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G + + ++ T S +SA A++ V++G +H K G
Sbjct: 614 GFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGY-D 672
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
S V AL+ YAKCG + ++W++MI GY G G +L LF DM
Sbjct: 673 SETEVSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCGFEALKLFEDM 719
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+V PN V F +LSACSH G+V EG F SM VP +HY C+VDLL R+G
Sbjct: 720 KQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGL 779
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L A F+E MPI+PD ++ L C ++ D+GE +LEL P + YVLVSN+
Sbjct: 780 LSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNM 839
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YA G+W ++ R++MK RG+ K PG S V++D
Sbjct: 840 YAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVD 873
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 152/542 (28%), Positives = 267/542 (49%), Gaps = 30/542 (5%)
Query: 71 LLIVDGLTNDKC---NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
L +++G N + KL+ Y +FG + A +VFD MP + + + L
Sbjct: 85 LWLLEGCLNSRSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLM 144
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKAC----CELRDIDEGMKVHCEIVKVGGPDS-FV 182
+ ++ M + E D +F+ VL+ C R +++ +H + + G S F+
Sbjct: 145 GRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQ---IHAKTITSGFESSTFI 201
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
L+D+Y K + S+++VF+ ++ VSW +MI+G QN +E ++LF ++
Sbjct: 202 CNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI----- 256
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+++AC K+ GK LHG +LK G +++ AL+ +Y + GN+ A
Sbjct: 257 ---------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQ 307
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F + D VS+ ++I G Q GY ++AL LF P+ VT+AS+LSA A +G
Sbjct: 308 IFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGA 367
Query: 363 LNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN-SIIS 420
L G+ HS I+ G+ D V +L+D+Y KC I A F + D + + I +
Sbjct: 368 LPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFT 427
Query: 421 GLD-DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ + + P+ T S++ C +LGA +G +H K G NVYV + L++ YAK
Sbjct: 428 QMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG-FQFNVYVSSVLIDMYAKH 486
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G A +F ++E + V+W+AMI GY +L LF +M ++ ++ + + F + +
Sbjct: 487 GKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAI 546
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SAC+ + +G + C + + +V L AR G++ EA + + + +
Sbjct: 547 SACAGIQALDQGRQIHAQSCLS-GYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDN 605
Query: 600 VS 601
VS
Sbjct: 606 VS 607
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/494 (37%), Positives = 280/494 (56%), Gaps = 19/494 (3%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F+ ++ MI G L+LF +M E V+ ++ T S++ AC++++A
Sbjct: 77 IFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKA 136
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +G+ +H ILK G + N + L+ MY CG I AR VFD + +V+W +M+ G
Sbjct: 137 LREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSG 196
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
YT++G D+ +KLF + VT+ SVL A +L NL +G ++ + GL +
Sbjct: 197 YTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRN 256
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD---------------- 424
T+ +L+DMYAKC + AR +F+ ++DV+AW+++ISG
Sbjct: 257 NTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQK 316
Query: 425 -NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
NV P+ VT+VSV+ +CA LGA + G +H Y K+ + V +GT L++FYAKCG
Sbjct: 317 GNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKM-KLTVTLGTQLIDFYAKCGYID 375
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ VF M KN TW+A+I G G+G +L FS ML +V+PN+V F +LSACS
Sbjct: 376 RSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACS 435
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H +V +G F SM RDF P ++HY CMVD+L RAG LEEA +F++NMP P+ ++
Sbjct: 436 HACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVW 495
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
L C + ++ E ++ + L P + Y+L+SN YA GR +VR L+K++
Sbjct: 496 RTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEK 555
Query: 664 GLSKSPGCSLVDLD 677
+ K PGCSL++LD
Sbjct: 556 EIKKIPGCSLIELD 569
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/583 (29%), Positives = 274/583 (46%), Gaps = 82/583 (14%)
Query: 40 TFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSF---GHV 96
+ S P P +L CK+ L+ HA L+ D T+ V + +
Sbjct: 12 SLTSITQFPENPKSLILQQCKTPKDLQQVHAHLLKTRRLLDPIITEAVLESAALLLPDTI 71
Query: 97 KYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC 156
YA S+F+ + P+ ++ VMIR + + +K M ++ +HD F FS VLKAC
Sbjct: 72 DYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKAC 131
Query: 157 CELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWT 215
++ + EG +VH I+K G + FV L+ MYA C IG +R VFD ++++V+W
Sbjct: 132 SRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWN 191
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
SM++GY +N E + LF ++ E +E + +T+ S++ AC +L L G+ + YI+
Sbjct: 192 SMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSK 251
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G+ N+ L T+L+DMY KCG + AR +FDE+ D+V+W+AMI GY Q+ +AL LF
Sbjct: 252 GLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLF 311
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH--------SLGIRLGLEDYTVINAL 387
+ + + +PN VT+ SVL + A LG G+ VH L + LG + L
Sbjct: 312 HEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQ-------L 364
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDA 430
+D YAKC I + +F+ S K+V W ++I GL +N V P+
Sbjct: 365 IDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPND 424
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
VT + V+SAC+ HA QG R +F+
Sbjct: 425 VTFIGVLSACS-----------HACLVDQG-------------------------RHLFN 448
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML----NEEVQPNEVIFTTILSACSHTG 546
+MR + I YG D G + N PN V++ T+L++C
Sbjct: 449 SMRRDFDI--EPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHK 506
Query: 547 MVGEGWKCFYSMCRDFKFVPSMK-HYVCMVDLLARAGRLEEAL 588
+ K + R P+ Y+ + + A GR+E+A+
Sbjct: 507 NIEMAEKSLEHITR---LEPAHSGDYILLSNTYALVGRVEDAI 546
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 224/452 (49%), Gaps = 32/452 (7%)
Query: 54 NLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C +L+ HAL++ G +N+ L+ MY + G + AR VFD MP
Sbjct: 126 SVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPER 185
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
++ M+ Y N L+ ++V+ ++ + + E D+ VL AC L +++ G +
Sbjct: 186 SIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIG 245
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
IV G ++ + T L+DMYAKC + ++R++FDE ++VV+W++MI+GY Q D +
Sbjct: 246 EYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCK 305
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E L LF+ M++G V N++T+ S++ +CA L A GKW+H YI K +++ L T L+
Sbjct: 306 EALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLI 365
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
D Y KCG I + VF E+ ++ +WTA+I G +G AL+ F+ D PN V
Sbjct: 366 DFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDV 425
Query: 349 TIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYI 403
T VLSA + ++ GR M I +E Y +VD+ + + +A
Sbjct: 426 TFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHY---GCMVDILGRAGFLEEAYQF 482
Query: 404 FETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
+ P+AV +++++C + +++ + T+
Sbjct: 483 IDNMP-----------------FPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAH 525
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
S Y+ L N YA G + A V ++EK
Sbjct: 526 SGDYI--LLSNTYALVGRVEDAIRVRSLIKEK 555
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 191/548 (34%), Positives = 309/548 (56%), Gaps = 30/548 (5%)
Query: 152 VLKACCELRDIDEGMKVHCE-IVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
+LK C + + + +H + I+ +F+L +D+ +D ++ +F + N
Sbjct: 37 LLKQCTSTKSLQQ---IHTQMIINAIHKPNFLLHRFIDL----KDFNNASLLFSQIPYPN 89
Query: 211 VVSWTSMIAGYVQN-DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
++ MI G + + +M++ + N T + ACA L L+ G+ H
Sbjct: 90 EYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAH 149
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
+LK G+ + H+ +L+ MY +CG + AR VFDE+ DLVSW +MI GY++ GY
Sbjct: 150 SGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAG 209
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
A+ LF + + A F P+ +T+ S+L A LG+L +G + + ++ + V +AL+
Sbjct: 210 DAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALI 269
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAV 431
MY KC ++ AR +F+ +KDV+ WN++I+G N V+PD +
Sbjct: 270 GMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKI 329
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
TLV V+SACAS+GA+ G L Y++++GL +++YV TAL++ YAKCG A VF+
Sbjct: 330 TLVGVLSACASIGALDFGKWLDTYASERGL-QNDIYVSTALIDMYAKCGSLDDALRVFED 388
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE--EVQPNEVIFTTILSACSHTGMVG 549
M +KN V+W+AMI G SL+LF M E V+PN++ F +LSAC H G+V
Sbjct: 389 MPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVD 448
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG + F M F VP ++H+ CMVDLLARAG + EA +F+E MP +PD + GA L
Sbjct: 449 EGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGA 508
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C D+ E ++ +LE+ P + Y++ S ++A+ RW ++R LM+QRG++K+P
Sbjct: 509 CQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTP 568
Query: 670 GCSLVDLD 677
GCS ++++
Sbjct: 569 GCSWIEIE 576
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 260/520 (50%), Gaps = 43/520 (8%)
Query: 16 KPKLQLRFFS--YTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLI 73
KPK S +T +Q QT L+LL C ST SL+ H +I
Sbjct: 3 KPKASSHLISRHFTKALAKSQRHAQQTLTD-------KLLSLLKQCTSTKSLQQIHTQMI 55
Query: 74 VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR-----WYFLNDLYK 128
++ + L+ + A +F +P P+ Y+F +MIR W N
Sbjct: 56 INAIHKPNF---LLHRFIDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQKFNL--- 109
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLV 187
+EFY M+ +NF + V AC L ++ G H ++K G D V L+
Sbjct: 110 -TIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLI 168
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
MY++C ++G +R+VFDE +K++VSW SMI+GY + A + + LF MR+ E +++
Sbjct: 169 TMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEM 228
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TL S++ AC L L G W+ G++++ +++NS + +AL+ MY KCG++ AR VFD +
Sbjct: 229 TLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRM 288
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
D+V+W AMI GY Q+G D+A+ LF+ + + P+ +T+ VLSA A +G L+ G+
Sbjct: 289 VKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIGALDFGK 348
Query: 368 MVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---- 422
+ + GL+ D V AL+DMYAKC + DA +FE +K+ ++WN++IS L
Sbjct: 349 WLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHG 408
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
V P+ ++ + V+SAC G V G L + L +
Sbjct: 409 RPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIE 468
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGG 506
+ +++ A+ G A + M EK + V A++G
Sbjct: 469 HHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGA 508
>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
Length = 781
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 196/611 (32%), Positives = 323/611 (52%), Gaps = 21/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV + G + A ++ PD + VMIR + L + Y+ M + D
Sbjct: 47 LVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F F V+K C L +DEG H ++K+G D + LV YAK + + +VFD
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF-VEGNQITLGSLVTACAKLRALH 263
+++V+W +M+ GYV N L F M + V+ + + + + + AC +
Sbjct: 167 GMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSM 226
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QGK +HGY+++ G+E + + T+LLDMY KCG + ARSVF + +V+W MI GY
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
+ PD+A F + VT ++L+A AQ + GR VH +R + V
Sbjct: 287 LNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVV 346
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ AL++MY K + + IF + K +++WN++I+ L+
Sbjct: 347 LETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQP 406
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD T+ +V+ A LG+++ +H+Y G + N + A+L+ YA+ GD ++
Sbjct: 407 LYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGY-AENTLIMNAVLHMYARSGDVVAS 465
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R +FD M K+ ++W+ MI GY + G G +L +F +M +QPNE F ++L+ACS +
Sbjct: 466 REIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVS 525
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EGW F M +++ +P ++HY CM DLL R G L E L+F+E+MPI+P ++G+
Sbjct: 526 GLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGS 585
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L + D+ E +++ +L D Y+++S++YA GRW V +VR LMK++GL
Sbjct: 586 LLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGL 645
Query: 666 SKSPGCSLVDL 676
++ SLV+L
Sbjct: 646 RRTEPISLVEL 656
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 164/321 (51%), Gaps = 6/321 (1%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H +I GL D K T L+ MY G V YARSVF +MP ++ MI Y LN
Sbjct: 229 KEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALN 288
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVL 183
+ + + + MR + + +L AC + G VH +V+ P +
Sbjct: 289 ERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLE 348
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L++MY K + SS ++F + +K +VSW +MIA Y+ + E + LF + +
Sbjct: 349 TALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLY 408
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ T+ ++V A L +L + +H YI+ +G N+ ++ A+L MY + G++ +R +
Sbjct: 409 PDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREI 468
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
FD++ S D++SW MI+GY G AL++F + K+ PN T SVL+A + G +
Sbjct: 469 FDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLV 528
Query: 364 NMGRMVHSLGIRLGLEDYTVI 384
+ G M L L++Y +I
Sbjct: 529 DEGWM----HFNLMLQEYGMI 545
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/520 (36%), Positives = 295/520 (56%), Gaps = 29/520 (5%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D+FV + L +Y K +R+VFD + + W +++AG E L F RM
Sbjct: 148 DTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP----GSEALEAFVRMV 203
Query: 239 E-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
+ G V + TL S + A A+ + G+ +HGY +K G+ + H+VT L+ +Y KCG++
Sbjct: 204 DAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDM 263
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
A+ +FD + + DLV++ A+I GY+ +G + +++LF + + + PN T+ +V+
Sbjct: 264 DSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVY 323
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ G+ + R +H+ ++ L+ D V AL +Y + + + AR IF+ EK + +WN
Sbjct: 324 SPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWN 383
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++ISG N V P+ +T+ S +SACA LGA+ +G +H +K+
Sbjct: 384 AMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKE 443
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L NVYV TAL++ YAKCG AR +FD M KN V+W+AMI GYG+ G G +L L
Sbjct: 444 KL-ELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKL 502
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
+ DML+ + P F +++ ACSH G+V EG K F M +++ P ++H CMVDLL
Sbjct: 503 YKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLG 562
Query: 580 RAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
RAG+L EALE + P I P V +GA L C ++ DL ++ +K+ EL + A Y
Sbjct: 563 RAGKLNEALELISEFPQSAIGPGV--WGALLGACMVHKNSDLAKLASQKLFELDSENAGY 620
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YVL+SNLY S + VR+ K R L K+PGC+L+++
Sbjct: 621 YVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEI 660
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 225/463 (48%), Gaps = 25/463 (5%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H L + G D + L +Y AR VFD++P+PD + ++ +
Sbjct: 134 RTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLPGS 193
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+ + V R R D+ + L+A E + G VH VK G V+
Sbjct: 194 EALEAFVRMVDAGRVR---PDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVV 250
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
TGL+ +Y+KC D+ S++ +FD + ++V++ ++I+GY N + + LF +
Sbjct: 251 TGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWR 310
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N TL +++ + + LH +++K ++ ++ + TAL +Y + ++ ARS+
Sbjct: 311 PNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSI 370
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
FD + + SW AMI GY Q+G + A+ LF + + PN +TI+S LSA A LG L
Sbjct: 371 FDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGAL 430
Query: 364 NMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG- 421
++G+ VH + + LE + V+ AL+DMYAKC IA+AR IF+ K+V++WN++ISG
Sbjct: 431 SLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGY 490
Query: 422 ----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
LD + P + T +SVI AC+ G V G + T + ++
Sbjct: 491 GLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPG 550
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREK--NTVTWSAMIGG 506
+ T +++ + G A + + W A++G
Sbjct: 551 IEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGA 593
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 189/607 (31%), Positives = 338/607 (55%), Gaps = 21/607 (3%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G++ AR++FDSM ++ ++I Y N+ +++ + M + + D+
Sbjct: 142 YIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSL 201
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLD 208
+ +L E ++E +VH ++K+G + V++ L+D Y K R +G + Q+F++ +
Sbjct: 202 ATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPE 261
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
++ V++ +++ GY + +E + LF +M+E + T +++TA +L + G+ +
Sbjct: 262 RDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQV 321
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
HG+++K N + ALLD Y K + +A +F E+ +D +S+ ++ Y +G
Sbjct: 322 HGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRV 381
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL-GLEDYTVINAL 387
++L+LF + ++ F + A++LS +A NL++GR +HS I + + V N+L
Sbjct: 382 KESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSL 441
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDN------------VSPDA 430
VDMYAKC +A IF + + + W ++IS GL ++ + DA
Sbjct: 442 VDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADA 501
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
T S++ ACASL ++ +G LH++ G +S NV+ G+AL++ YAKCG + A +F
Sbjct: 502 ATYASIVRACASLASLTLGKQLHSHIIGSGYIS-NVFSGSALVDMYAKCGSIKDALQMFQ 560
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
M +N+V+W+A+I Y GDG +L LF +M+ +QP+ V +IL ACSH G+V E
Sbjct: 561 EMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEE 620
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G + F SM R +K VP +HY +D+L R GR +EA + M MP EPD ++ + L+ C
Sbjct: 621 GLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSC 680
Query: 611 GLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
G++ +L + ++ + + A YV +SN+YA+ G W V +V++ M++RG+ K P
Sbjct: 681 GIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVP 740
Query: 670 GCSLVDL 676
S V++
Sbjct: 741 AYSWVEI 747
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/524 (24%), Positives = 249/524 (47%), Gaps = 65/524 (12%)
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV------------- 211
+ V I+K G P+++ LV + + D+ +R++FDE KN+
Sbjct: 86 LHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKS 145
Query: 212 ------------------VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLV 253
V+WT +I GY QN+ +E LF M ++ + ++L +L+
Sbjct: 146 GNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLL 205
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
+ + ++++ + +H +++K+G + + +LLD Y K ++ A +F+++ D V
Sbjct: 206 SGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSV 265
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
++ A++ GY++ G+ +A+ LF + + P T A++L+A QL ++ G+ VH
Sbjct: 266 TFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFV 325
Query: 374 IRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII------------- 419
++ + + V NAL+D Y+K + +A +F E D I++N ++
Sbjct: 326 VKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESL 385
Query: 420 --------SGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+G D P A TL+S+ + +L +G +H+ + +S + VG +
Sbjct: 386 ELFKELQFTGFDRRNFPFA-TLLSIAAISLNL---DIGRQIHSQTIVTDAISE-ILVGNS 440
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ YAKCG+ A +F + +++V W+AMI Y +G L LF +M ++ +
Sbjct: 441 LVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGAD 500
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
+ +I+ AC+ + G K +S ++ ++ +VD+ A+ G +++AL+
Sbjct: 501 AATYASIVRACASLASLTLG-KQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMF 559
Query: 592 ENMPIEPDVS---LFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
+ MP+ VS L A+ L E M++ L+ PD
Sbjct: 560 QEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQ--PD 601
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 237/521 (45%), Gaps = 36/521 (6%)
Query: 71 LLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDI 130
L++ + L + C T+ + + A +F+ +P D +F ++ Y ++
Sbjct: 233 LVVSNSLLDSYCKTRSLGL---------AFQLFNDIPERDSVTFNALLTGYSKEGFNREA 283
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDM 189
+ + M++ F F+ +L A +L DI+ G +VH +VK + FV L+D
Sbjct: 284 INLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDF 343
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y+K + + ++F E + + +S+ ++ Y N +E L LF ++ +
Sbjct: 344 YSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPF 403
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELC 308
+L++ A L G+ +H + + I+ LV +L+DMY KCG +A +F +L
Sbjct: 404 ATLLSIAAISLNLDIGRQIHSQTI-VTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLA 462
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
V WTAMI Y Q G + LKLF + + A + T AS++ A A L +L +G+
Sbjct: 463 IQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQ 522
Query: 369 VHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-- 425
+HS I G + + +ALVDMYAKC I DA +F+ ++ ++WN++IS N
Sbjct: 523 LHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGD 582
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
+ PD+V+L+S++ AC+ G V+ G T+ L
Sbjct: 583 GDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYA 642
Query: 471 ALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
+ ++ + G A + M E + + WS+++ G+ + + + + N +V
Sbjct: 643 STIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVL 702
Query: 530 PNEVIFTT---ILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
+ + T I +A VG+ K R K VP+
Sbjct: 703 RDAAPYVTMSNIYAAAGEWDNVGKVKKAMRE--RGVKKVPA 741
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 208/619 (33%), Positives = 335/619 (54%), Gaps = 28/619 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ LV MY G V+ A +FD MP D ++ +I N + + + M + +
Sbjct: 149 SSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGD 208
Query: 144 HDNFVFSKV----LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
S+ L+AC L ++ G +H VK G G V++ L MY KC
Sbjct: 209 GGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTED 268
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R +F E +K++VSWTS+I Y + A++ + LF M E ++ +++ + L+
Sbjct: 269 ARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGN 328
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ GK H I++ + + AL+ MY KC + A +VF L D SW++M
Sbjct: 329 DAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSM 388
Query: 319 IVGYTQSGYPDKALKLFTDKKWAD---FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+V Y ++G K L+L+ + ++ D F + ++ S++S+ ++LG L +G+ H I+
Sbjct: 389 VVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIK 448
Query: 376 -LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
L E+ +V NAL+ MY +C AR IF KDV+ W+++IS
Sbjct: 449 HLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLL 508
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
L + V P++ TLVSVIS+CA+L A++ G +H++ GL ++ + TAL++ Y
Sbjct: 509 YDQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGL-ECDLSICTALVDMYM 567
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG AR +FD+M E++ VTW+ MI GYGM G+ +L LFS M V+PN + F
Sbjct: 568 KCGQLGIARKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLA 627
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
ILSAC H G+V +G + F M ++ P++KHY CMVDLL ++G L+EA + + MPIE
Sbjct: 628 ILSACCHAGLVDKGRELFTRM-EEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIE 686
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
PD ++G L C ++ F++G + KK P+ YY+L+SN Y S +W + ++R
Sbjct: 687 PDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLR 746
Query: 658 ELMKQRGLSKSPGCSLVDL 676
++MK G+ KS G S +D+
Sbjct: 747 DMMKNHGVEKSIGWSTIDI 765
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 178/576 (30%), Positives = 287/576 (49%), Gaps = 33/576 (5%)
Query: 68 FHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HAL + GL+ KLVS Y S G A F + P PD + + ++R
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSF-V 182
+ + ++ MR F V A EL + G VH V+ G G S V
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM----R 238
+ LV MYA+C + + ++FDE +++VV+WT++I+G V N EGL RM
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+G N T+ S + AC L L G LHG+ +K G+ +V++L MY KC +
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DAR +F EL DLVSWT++I Y ++G+ +KA++LF + + P+ V I+ +L+
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ G+ H+ +R D +I NAL+ MYAKC + A +F ++D +W+S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387
Query: 418 II-----SGLD---------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
++ +GLD D D +L+S+IS+C+ LG +++G S H YS
Sbjct: 388 MVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSI 447
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K L N V AL++ Y +CG+ AR +F ++ K+ VTWSA+I Y G +L
Sbjct: 448 KH-LAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDAL 506
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
L+ ML E V+PN +++S+C++ + G + +S +D + +VD+
Sbjct: 507 LLYDQMLTEGVKPNSATLVSVISSCANLAALEHG-ELIHSHVKDVGLECDLSICTALVDM 565
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
+ G+L A + ++M +E DV + + G G++
Sbjct: 566 YMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH 600
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 184/361 (50%), Gaps = 7/361 (1%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K FHA ++ + L+SMY V A +VF + D S+ M+ Y
Sbjct: 336 KTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKA 395
Query: 125 DLYKDIVEFYKCMRKRLK---EHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDS 180
L +E Y+ M+ R K E+D ++ +C L + G HC +K + G +S
Sbjct: 396 GLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENS 455
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
V L+ MY +C + +R++F K+VV+W+++I+ Y +++ L+L+++M
Sbjct: 456 SVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTE 515
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V+ N TL S++++CA L AL G+ +H ++ +G+E + + TAL+DMY+KCG + A
Sbjct: 516 GVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIA 575
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
R +FD + D+V+W MI GY G +ALKLF+ + + PN +T ++LSA
Sbjct: 576 RKMFDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHA 635
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSI 418
G ++ GR + + LE + +VD+ K + +A + E D W ++
Sbjct: 636 GLVDKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTL 695
Query: 419 I 419
+
Sbjct: 696 L 696
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/508 (36%), Positives = 302/508 (59%), Gaps = 22/508 (4%)
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE-GNQITLGSLVT 254
+G + VF T +V++W SM+ +V ++ + L + M E ++ T SL+
Sbjct: 28 VGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLK 87
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
CA L GK LHG ++K + + ++ T LL+MY CG+++ AR +F+ + + V
Sbjct: 88 GCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVV 147
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
WT+MI GY ++ P++AL L+ + F P+ VT+A+++SA A+L +L +G +HS
Sbjct: 148 WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIR 207
Query: 375 RLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------- 422
+ ++ V+ +ALV+MYAKC + AR +F+ S+KDV AW+++I G
Sbjct: 208 EMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQ 267
Query: 423 -------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
N+ P+ VT+++VISACA LG ++ G +H Y T+ +V + +L++
Sbjct: 268 LFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQK-GHSVSLNNSLIDM 326
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
++KCGD +A+ +FD+M K+ ++W++M+ G + G G +LA F M ++QP+E+ F
Sbjct: 327 FSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITF 386
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+L+ACSH G+V EG K FY + + +HY CMVDLL RAG L EA EF+ MP
Sbjct: 387 IGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP 446
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
++PD +++G+ L C +Y+ +LGE + +LEL P Y+L+SN+YA W V +
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKK 506
Query: 656 VRELMKQRGLSKSPGCSLVDLD-IANDF 682
VRELM ++G+ K+PGCS V +D IA+ F
Sbjct: 507 VRELMNEKGIQKTPGCSSVVIDNIAHSF 534
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 258/461 (55%), Gaps = 27/461 (5%)
Query: 72 LIVDGLTNDKCN-TKLVSMYGSFGH--VKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
++V G + K + KL++ S G V YA SVF D ++ M+R + +++ +
Sbjct: 1 MVVTGFIHHKPSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPR 60
Query: 129 DIVEFYKCMRKRLKE-HDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGL 186
++ Y M +R + D F F +LK C L + G +H ++VK + D ++ T L
Sbjct: 61 RALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTL 120
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
++MYA C D+ S+R +F+ +N V WTSMI+GY++N C E L+L+ +M E ++
Sbjct: 121 LNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDE 180
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+T+ +LV+ACA+L+ L G LH +I ++ ++I + L +AL++MY KCG+++ AR VFD+
Sbjct: 181 VTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQ 240
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNM 365
L D+ +W+A+I GY ++ +AL+LF + ++ PN VTI +V+SA AQLG+L
Sbjct: 241 LSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLET 300
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
GR VH R ++ N+L+DM++KC I A+ IF++ S KD+I+WNS+++GL
Sbjct: 301 GRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLAL 360
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVGSSL-HAYSTKQGLLSSNV 466
++ PD +T + V++AC+ G VQ G L + G+ +
Sbjct: 361 HGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSE 420
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ G +++ + G AR M + + W +M+G
Sbjct: 421 HYG-CMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGA 460
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 217/717 (30%), Positives = 361/717 (50%), Gaps = 48/717 (6%)
Query: 3 LISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQH--------ELDQTFASFHSLPSIPCLN 54
+++L R + R P+ + F T + QH DQT + H S+
Sbjct: 38 VVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSG 97
Query: 55 L----------LGLCKST--GSL-KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYAR 100
L L +C + G++ + H + GL + LV MY G+V+ R
Sbjct: 98 LSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGR 157
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR 160
VFD M + D S+ ++ Y N + E + M+ D + S V+ A
Sbjct: 158 RVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQG 217
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
+ GM++H +VK+G + V L+ M +K + +R VFD +K+ VSW SMIA
Sbjct: 218 AVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIA 277
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
G+V N E FN M+ + T S++ +CA L+ L + LH LK G+
Sbjct: 278 GHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLST 337
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSID-LVSWTAMIVGYTQSGYPDKALKLFTDK 338
N +++TAL+ KC I DA S+F + + +VSWTAMI GY Q+G D+A+ LF+
Sbjct: 338 NQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLM 397
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVI 397
+ PNH T +++L+ + +H+ I+ E + + AL+D + K I
Sbjct: 398 RREGVKPNHFTYSTILTVQHAV----FISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNI 453
Query: 398 ADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISAC 440
+DA +FE KDVIAW+++++G + + P+ T S+I+AC
Sbjct: 454 SDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINAC 513
Query: 441 -ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
A +V+ G HAY+ K L ++ + V ++L+ YAK G+ +SA +F +E++ V+
Sbjct: 514 TAPTASVEQGKQFHAYAIKLRL-NNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVS 572
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W++MI GY G +L +F +M ++ + + F ++SAC+H G+VG+G F M
Sbjct: 573 WNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMI 632
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
D P+M+HY CM+DL +RAG L +A++ + MP P +++ L ++ +LG
Sbjct: 633 NDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELG 692
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++ +K++ L P + YVL+SN+YA+ G W VR+LM +R + K PG S +++
Sbjct: 693 KLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEV 749
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 148/289 (51%), Gaps = 19/289 (6%)
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ SH+V ++ + R A+ +FD+ DL ++ Y++ +AL LF
Sbjct: 34 LQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSL 93
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVI 397
+ P+ T++ VLS A N +G VH ++ GL + +V N+LVDMY K +
Sbjct: 94 YRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNV 153
Query: 398 ADARYIFETTSEKDVIAWNSIISG-----LDDNV------------SPDAVTLVSVISAC 440
D R +F+ ++DV++WNS+++G +D V PD T+ +VI+A
Sbjct: 154 RDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAAL 213
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
A+ GAV +G +HA K G + + V +L++ +K G + AR+VFD M K++V+W
Sbjct: 214 ANQGAVAIGMQIHALVVKLGFETERL-VCNSLISMLSKSGMLRDARVVFDNMENKDSVSW 272
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
++MI G+ + G + F++M +P F +++ +C+ +G
Sbjct: 273 NSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELG 321
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 211/641 (32%), Positives = 343/641 (53%), Gaps = 33/641 (5%)
Query: 66 KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMP---NPDFYSFQVMIRWY 121
K HA LI + D L+S+Y G + A+ VF++M D S+ M+ +
Sbjct: 82 KLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACF 141
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF 181
N D ++ + + +++ ++ V++AC + G + ++K G +S
Sbjct: 142 GNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESD 201
Query: 182 VLTG--LVDMYAKCRD-IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
V G L+DM+ K + ++ +VFD+ + NVV+WT MI +Q +E + F M
Sbjct: 202 VCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC---G 295
E ++ TL S+ +ACA+L L G+ LH + ++ G+ + +L+DMY KC G
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLA--DDVECSLVDMYAKCSADG 319
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQS-GYPDKALKLFTDK-KWADFFPNHVTIASV 353
++ D R VFD + ++SWTA+I GY Q+ +A+ LF++ PNH T +S
Sbjct: 320 SVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVD-MYAKCHVIADARYIFETTSEKDV 412
A + + +G+ V + GL + ++ V M+ KC + DAR FE+ SEK++
Sbjct: 380 FKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNL 439
Query: 413 IAWNSIISGLDDNVSPD-----------------AVTLVSVISACASLGAVQVGSSLHAY 455
+++N+ + G N+ + A T S++S A++G+++ G +H+
Sbjct: 440 VSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQ 499
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K GL S N V AL++ Y+KCG +A VF M +N ++W++MI G+ G
Sbjct: 500 VLKLGL-SCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAER 558
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
L F+ M E V+PNEV + ILSACSH G+V EGW+ F SM D K P M+HY CMV
Sbjct: 559 VLETFNQMTKEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMV 618
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DLL RAG L +A EF+ MP + DV ++ FL C ++S +LG++ +K+LE P++
Sbjct: 619 DLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPA 678
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+ +SN+YAS G+W ++R MK+R L K GCS +++
Sbjct: 679 AYIQLSNIYASAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 256/507 (50%), Gaps = 41/507 (8%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
R ++ D+ FS +LK+C R G VH +++ PDS + L+ +Y+K D+
Sbjct: 54 RDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDL 113
Query: 197 GSSRQVFDETL----DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
++ VF ET+ ++VVSW++M+A + N + + LF E + N ++
Sbjct: 114 TKAKDVF-ETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAV 172
Query: 253 VTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGN-IRDARSVFDELCSI 310
+ AC+ + G+ + G+++K G E + + +L+DM+VK N +A VFD++ +
Sbjct: 173 IRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
++V+WT MI Q G+P +A++ F D + F + T++SV SA A+L NL++GR +H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLH 292
Query: 371 SLGIRLGLEDYTVINALVDMYAKCHV---IADARYIFETTSEKDVIAWNSIISGLDDN-- 425
S IR GL D V +LVDMYAKC + D R +F+ + V++W ++I+G N
Sbjct: 293 SWAIRSGLAD-DVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCN 351
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
V P+ T S AC ++ +VG + ++ K+G L+SN V
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRG-LASNSSV 410
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
++++ + KC + AR F+++ EKN V+++ + G D + L S++ E+
Sbjct: 411 SNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAEREL 470
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEE 586
+ F ++LS ++ G + +G + + K S VC ++ + ++ G ++
Sbjct: 471 GVSAFTFASLLSGVANVGSLRKGEQIHSQV---LKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 587 A---LEFMENMPIEPDVSLFGAFL-HG 609
A M+N + S+ F HG
Sbjct: 528 ASRVFSLMDNRNVISWTSMITGFAKHG 554
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 202/647 (31%), Positives = 341/647 (52%), Gaps = 28/647 (4%)
Query: 48 PSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
P++ L +G CKS H ++ + N+ L+ MY G V A+ VFD M
Sbjct: 208 PAVSRLGDVGCCKS------IHGYVVRRSICGVVSNS-LIDMYCKCGDVHSAQRVFDRMG 260
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
D S+ M+ Y N Y + ++ MR+ + + L E+RD+++G +
Sbjct: 261 VRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKE 320
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
++ +++G D V T +V MYAKC ++ +R++F +++V+W++ ++ V+
Sbjct: 321 IYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGY 380
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+E L +F M+ ++ ++ L LV+ C ++ + GK +H Y +K +E + +VT
Sbjct: 381 PREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTT 440
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ MY++ A ++F+ + D+V W +I G+T+ G P AL++F + + P+
Sbjct: 441 LVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPD 500
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
T+ + SA A + +L++G +H + G E D V AL+DMYAKC + +F
Sbjct: 501 SGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFL 560
Query: 406 TTSE-KDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQ 447
T KD ++WN +I+G +NV P+ VT V+++ A + L ++
Sbjct: 561 LTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILR 620
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+ H + G LS + +G +L++ YAKCG + + F M K+T++W+AM+ Y
Sbjct: 621 EAMAFHTCIIRMGFLSCTL-IGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAY 679
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
M G G ++ALFS M V+ + V + ++LSAC H+G++ EGW F SMC PS
Sbjct: 680 AMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPS 739
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
M+HY CMVDLL AG +E L + M EPD ++GA L C ++S LGEV + +L
Sbjct: 740 MEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLL 799
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+L P ++V++S++YA GRW + R + GL K PG S V
Sbjct: 800 KLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 146/548 (26%), Positives = 266/548 (48%), Gaps = 32/548 (5%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
K + SL H + + N+ KL++ + + F + NP + I+
Sbjct: 14 KHSNSLHTHH-IFPIQQQNNNNHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIK 72
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP- 178
Y + + Y + K + D F F+ VLKAC D EG+ ++ +IV G
Sbjct: 73 AYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLEC 132
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D ++ T L+DM+ K + ++R VFD+ K+ V W +MI+G Q+ E L +F RM+
Sbjct: 133 DVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQ 192
Query: 239 -EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK---IGIEINSHLVTALLDMYVKC 294
EGF E +++++ +L A ++L + K +HGY+++ G+ NS L+DMY KC
Sbjct: 193 MEGF-EVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGVVSNS-----LIDMYCKC 246
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G++ A+ VFD + D VSW M+ GY ++G + L+L + + N V + + L
Sbjct: 247 GDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNAL 306
Query: 355 SASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
A++ +L G+ +++ +++GL D V +V MYAKC + AR +F + +D++
Sbjct: 307 LVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLV 366
Query: 414 AWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
AW++ +S L + + PD L ++S C + + +G +H Y+
Sbjct: 367 AWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYA 426
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K + S++ + T L++ Y + A +F+ M+ K+ V W+ +I G+ GD +
Sbjct: 427 IKAD-MESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLA 485
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
L +F+ + + P+ + SAC+ + G C + F + V ++D
Sbjct: 486 LEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLG-TCLHGGIEKSGFESDIHVKVALMD 544
Query: 577 LLARAGRL 584
+ A+ G L
Sbjct: 545 MYAKCGSL 552
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 227/456 (49%), Gaps = 28/456 (6%)
Query: 193 CRDIGSSRQV---FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
C+ I Q+ F + + +++ + S I Y + + + L++ + + ++ ++ T
Sbjct: 43 CKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTF 102
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
++ AC H+G ++ I+ G+E + ++ T+L+DM+ K G + +AR+VFD++
Sbjct: 103 NFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPV 162
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
D V W AMI G +QS P +AL++F + F + V+I ++ A ++LG++ + +
Sbjct: 163 KDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSI 222
Query: 370 HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------- 422
H +R + V N+L+DMY KC + A+ +F+ +D ++W ++++G
Sbjct: 223 HGYVVRRSICG-VVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYF 281
Query: 423 ----------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
NV + V +V+ + A + ++ G ++ Y+ + GL+ S++ V T +
Sbjct: 282 EGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLM-SDIVVATPI 340
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
+ YAKCG+ + AR +F ++ ++ V WSA + G L++F M E ++P++
Sbjct: 341 VCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDK 400
Query: 533 VIFTTILSACSHTGMVGEG--WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
I + ++S C+ +G G C Y++ D + SM +V + R A+
Sbjct: 401 AILSILVSGCTEISNIGLGKIMHC-YAIKADMESDISM--VTTLVSMYIRFELFTYAMTL 457
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
M I+ D+ ++ ++G Y L M ++
Sbjct: 458 FNRMQIK-DIVVWNTLINGFTKYGDPHLALEMFNRL 492
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 303/527 (57%), Gaps = 52/527 (9%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F+ + N++ W +M G+ N + L L+ M + N + L+ +CAK +A
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA--------------------- 300
L +G+ +HG++LK+G +++ ++ T+L+ MY + G + DA
Sbjct: 81 LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140
Query: 301 ----------RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
R +FDE+ D+VSW AMI GY ++ +AL+L+ D + P+ T+
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSE 409
+V+SA AQ G++ +GR +HS G + ++N L+D+Y+KC + A +F+ ++
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 410 KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
KDVI+WN++I G L SP+ VT++SV+ ACA LGA+ +G +
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 320
Query: 453 HAYSTK--QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
H Y K +G+ +++ + T+L++ YAKCGD ++A+ VFD+M ++ +W+AMI G+ M
Sbjct: 321 HVYINKRLKGVTNASSLL-TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMH 379
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G + LFS M + P+++ F +LSACSH+GM+ G F SM +D+K P ++H
Sbjct: 380 GKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEH 439
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CM+DLL G +EA E + MP+EPD ++ + L C +++ +LGE + ++++
Sbjct: 440 YGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIE 499
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P+ YVL+SN+YA+ GRW +V ++R L+ +G+ K+PGCS +++D
Sbjct: 500 PENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEID 546
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/473 (26%), Positives = 235/473 (49%), Gaps = 53/473 (11%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
F + YA S+F+++ P+ + M R + LN ++ Y CM +++ F +
Sbjct: 12 FDGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFL 71
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
LK+C + + + EG ++H ++K+G D +V T L+ MYA+ + + +VFD + ++V
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131
Query: 212 VSWTS-------------------------------MIAGYVQNDCAQEGLVLFNRMREG 240
VS+T+ MI+GYV+ +E L L+ M +
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V+ ++ T+ ++V+ACA+ ++ G+ LH +I G N +V L+D+Y KCG + A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F L D++SW +I G+T +AL LF + + PN VT+ SVL A A L
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311
Query: 361 GNLNMGRMVHS-LGIRL-GLEDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
G +++GR +H + RL G+ + +++ +L+DMYAKC I A+ +F++ + + +WN+
Sbjct: 312 GAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNA 371
Query: 418 IISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+I G + + PD +T V ++SAC+ G + +G + ++
Sbjct: 372 MIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDY 431
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
++ + +++ CG + A+ + M E + V W +++ M +
Sbjct: 432 KITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNN 484
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 206/435 (47%), Gaps = 30/435 (6%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
+L+ + G L+ H + + T L++ Y S G++ AR +FD + D S
Sbjct: 105 SLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVS 164
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ MI Y +K+ +E YK M K + D V+ AC + I+ G ++H I
Sbjct: 165 WNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIE 224
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
G G + ++ L+D+Y+KC ++ ++ +F K+V+SW ++I G+ + +E L+
Sbjct: 225 DHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALL 284
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK--IGIEINSHLVTALLDM 290
LF M N +T+ S++ ACA L A+ G+W+H YI K G+ S L+T+L+DM
Sbjct: 285 LFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDM 344
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KCG+I A+ VFD + + L SW AMI G+ G + A LF+ + P+ +T
Sbjct: 345 YAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITF 404
Query: 351 ASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFE 405
+LSA + G L++GR M I LE Y ++D+ C + +A+ +
Sbjct: 405 VGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHY---GCMIDLLGHCGLFKEAKEMIR 461
Query: 406 TTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
T + PD V S++ AC V++G S K +
Sbjct: 462 TMP-----------------MEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPG 504
Query: 466 VYVGTALLNFYAKCG 480
YV L N YA G
Sbjct: 505 SYV--LLSNIYATAG 517
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 139/278 (50%), Gaps = 13/278 (4%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ ++ C +GS+ + H+ + G +N K L+ +Y G V+ A +F +
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D S+ +I + +LYK+ + ++ M + + ++ VL AC L ID G +
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 320
Query: 169 HCEI---VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
H I +K S +LT L+DMYAKC DI +++QVFD L +++ SW +MI G+ +
Sbjct: 321 HVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG 380
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI---LKIGIEINSH 282
A LF++MR+ ++ + IT L++AC+ L G+ + + KI ++ +
Sbjct: 381 KANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHY 440
Query: 283 LVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMI 319
++D+ CG ++A+ + + D V W +++
Sbjct: 441 --GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLL 476
>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 788
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 308/559 (55%), Gaps = 29/559 (5%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQV 202
D F F VLK C L +DEG H +++G + V TG L+ YA+ + + +V
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF-VEGNQITLGSLVTACAKLRA 261
FD ++VV+W SM+ GYV N LV F M E V+ + + + + + AC A
Sbjct: 167 FDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESA 226
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L QG+ +H Y+++ G+E + + T++LDMY KCG+I A VF + S +V+W MI G
Sbjct: 227 LMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGG 286
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Y + P++A F K VT ++L+A AQ + GR VH R +
Sbjct: 287 YALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPH 346
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
V+ AL++MY+K + + +F + K +++WN++I+ L+
Sbjct: 347 VVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLN 406
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ PD T+ +V+ A LG ++ +H+Y + G N + A+++ YA+CGD
Sbjct: 407 QPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGY-GENTLIMNAIMHMYARCGDVL 465
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
S+R +FD M K+ ++W+ MI GY + G G +L +FS+M ++PNE F ++L+ACS
Sbjct: 466 SSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACS 525
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
+G+ EGW F SM RD+ +P ++HY CM DLL RAG L+E ++F+ENMPI+P ++
Sbjct: 526 VSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVW 585
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLEL------HPDKACYYVLVSNLYASDGRWIRVNQVR 657
G+ L + D+ E +++ +L H + C YVL+S++YA GRW V +++
Sbjct: 586 GSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGC-YVLISSMYADAGRWKDVERIK 644
Query: 658 ELMKQRGLSKSPGCSLVDL 676
LM+++GL ++ S+V+L
Sbjct: 645 SLMEEKGLRRTDPRSIVEL 663
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 157/303 (51%), Gaps = 2/303 (0%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HA +I G+ +D K T ++ MY G + A VF +MP+ ++ MI Y LN
Sbjct: 231 REVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALN 290
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVL 183
+ ++ + + M+ + + +L AC + G VH I + P +
Sbjct: 291 ERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLE 350
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L++MY+K + SS +VF + K +VSW +MIA Y+ + E + LF + +
Sbjct: 351 TALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLY 410
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ T+ ++V A L L Q + +H YI+++G N+ ++ A++ MY +CG++ +R +
Sbjct: 411 PDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREI 470
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
FD++ + D++SW MI+GY G AL++F++ K PN T SVL+A + G
Sbjct: 471 FDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLT 530
Query: 364 NMG 366
+ G
Sbjct: 531 DEG 533
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 133/277 (48%), Gaps = 22/277 (7%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARY 402
P+ T VL A+LG L+ GR HS IRLG+ D N+L+ YA+ ++ DA
Sbjct: 106 PDRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAER 165
Query: 403 IFETTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLG 444
+F+ +DV+ WNS++ G N V D V +++ ++AC
Sbjct: 166 VFDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLES 225
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
A+ G +HAY + G + +V VGT++L+ Y KCGD SA VF M + VTW+ MI
Sbjct: 226 ALMQGREVHAYVIRHG-MEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GGY + + F M E Q V +L+AC+ T G + R +F
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRR-QF 343
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
+P + ++++ ++ G+++ + + M + VS
Sbjct: 344 LPHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVS 380
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 112/224 (50%), Gaps = 5/224 (2%)
Query: 39 QTFASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDG-LTNDKCNTKLVSMYGSFG 94
Q A H + + +NLL C T S ++ H + L + T L+ MY G
Sbjct: 302 QMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVG 361
Query: 95 HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLK 154
VK + VF M S+ MI Y ++Y + + + + + D F S V+
Sbjct: 362 KVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVP 421
Query: 155 ACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS 213
A L + + ++H I+++G G ++ ++ ++ MYA+C D+ SSR++FD+ K+V+S
Sbjct: 422 AFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVIS 481
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
W +MI GY + + L +F+ M+ + N+ T S++TAC+
Sbjct: 482 WNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACS 525
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 208/620 (33%), Positives = 332/620 (53%), Gaps = 29/620 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ +++ Y FG + YA +FD MP D S+ MI Y +D + CM++
Sbjct: 38 SNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGS 97
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
+ D + FS++LK ++ D G +VH ++K G + +V + LVDMYAKC + + +
Sbjct: 98 DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFE 157
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLR 260
F E + N VSW ++IAG+VQ + L M + V + T L+T
Sbjct: 158 AFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMI 319
+ K +H +LK+G++ + A++ Y CG++ DA+ VFD L S DL+SW +MI
Sbjct: 218 FCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMI 277
Query: 320 VGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
G+++ + A +LF + W + + T +LSA + + G+ +H + I+ G
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVE--TDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG 335
Query: 378 LEDYT-VINALVDMYAK--CHVIADARYIFETTSEKDVIAWNSIISGL-DDNVSPDAVTL 433
LE T NAL+ MY + + DA +FE+ KD+I+WNSII+G +S DAV
Sbjct: 336 LEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKF 395
Query: 434 VS----------------VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
S ++ +C+ L +Q+G +HA +TK G +S N +V ++L+ Y+
Sbjct: 396 FSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVS-NEFVISSLIVMYS 454
Query: 478 KCGDAQSARMVFDAMREKN-TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
KCG +SAR F + K+ TV W+AMI GY G G SL LFS M N+ V+ + V FT
Sbjct: 455 KCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFT 514
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
IL+ACSHTG++ EG + M +K P M+HY VDLL RAG + +A E +E+MP+
Sbjct: 515 AILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPL 574
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
PD + FL C ++ + +LE+ P+ YV +S++Y+ +W V
Sbjct: 575 NPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASV 634
Query: 657 RELMKQRGLSKSPGCSLVDL 676
+++MK+RG+ K PG S +++
Sbjct: 635 KKMMKERGVKKVPGWSWIEI 654
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 301/549 (54%), Gaps = 31/549 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETL 207
+ +L+ C + R E VH ++K G D+F V++ LV++YAKC ++ +R+VFD L
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+NVV+WT+++ G+VQN + + +F M + TL +++ AC+ L++L G
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
H YI+K ++ ++ + +AL +Y KCG + DA F + +++SWT+ + +G
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
P K L+LF + D PN T+ S LS ++ +L +G V+SL I+ G E + V N+
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------LDDNVS------------ 427
L+ +Y K I +A +F + ++ WN++I+G DN+S
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLF 369
Query: 428 ---------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
PD TL SV+S C+ + A++ G +HA + K G LS +V V T+L++ Y+K
Sbjct: 370 SKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLS-DVIVSTSLISMYSK 428
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG + A F M + + W++MI G+ G +L +F DM V+PN V F +
Sbjct: 429 CGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGV 488
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
LSACSH GMV + F M + +K P+M HY CMVD+ R GRLE+AL F++ M EP
Sbjct: 489 LSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEP 548
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
++ F+ GC + +LG +++L L P YVL+ N+Y S R+ V++VR+
Sbjct: 549 SEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSRVRK 608
Query: 659 LMKQRGLSK 667
+M++ + K
Sbjct: 609 MMEEEKVGK 617
>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
Length = 781
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/611 (32%), Positives = 322/611 (52%), Gaps = 21/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV + G + A ++ PD + VMIR + L + Y+ M + D
Sbjct: 47 LVVSLAAEGRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPD 106
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F F V+K C L +DEG H ++K+G D + LV YAK + + +VFD
Sbjct: 107 RFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFD 166
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF-VEGNQITLGSLVTACAKLRALH 263
+++V+W M+ GYV N L F M + V+ + + + + + AC +
Sbjct: 167 GMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSM 226
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QGK +HGY+++ G+E + + T+LLDMY KCG + ARSVF + +V+W MI GY
Sbjct: 227 QGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYA 286
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
+ PD+A F + VT ++L+A AQ + GR VH +R + V
Sbjct: 287 LNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVV 346
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ AL++MY K + + IF + K +++WN++I+ L+
Sbjct: 347 LETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQP 406
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD T+ +V+ A LG+++ +H+Y G + N + A+L+ YA+ GD ++
Sbjct: 407 LYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGY-AENTLIMNAVLHMYARSGDVVAS 465
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R +FD M K+ ++W+ MI GY + G G +L +F +M +QPNE F ++L+ACS +
Sbjct: 466 REIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVS 525
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EGW F M +++ +P ++HY CM DLL R G L E L+F+E+MPI+P ++G+
Sbjct: 526 GLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGS 585
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L + D+ E +++ +L D Y+++S++YA GRW V +VR LMK++GL
Sbjct: 586 LLTASRNQNDIDIAEYAAERIFQLEHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGL 645
Query: 666 SKSPGCSLVDL 676
++ SLV+L
Sbjct: 646 RRTEPISLVEL 656
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 164/321 (51%), Gaps = 6/321 (1%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H +I GL D K T L+ MY G V YARSVF +MP ++ MI Y LN
Sbjct: 229 KEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALN 288
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVL 183
+ + + + MR + + +L AC + G VH +V+ P +
Sbjct: 289 ERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLE 348
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L++MY K + SS ++F + +K +VSW +MIA Y+ + E + LF + +
Sbjct: 349 TALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLY 408
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ T+ ++V A L +L + +H YI+ +G N+ ++ A+L MY + G++ +R +
Sbjct: 409 PDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREI 468
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
FD++ S D++SW MI+GY G AL++F + K+ PN T SVL+A + G +
Sbjct: 469 FDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLV 528
Query: 364 NMGRMVHSLGIRLGLEDYTVI 384
+ G M L L++Y +I
Sbjct: 529 DEGWM----HFNLMLQEYGMI 545
>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
Length = 939
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 326/627 (51%), Gaps = 20/627 (3%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFLNDL 126
H L + GL LV MY G + A VF+ M + D S+ I N +
Sbjct: 186 HGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGM 245
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGL 186
+ + ++ ++ M+ +++ VL+ C EL ++ G ++H ++K G + L
Sbjct: 246 FLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNAL 305
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ MYA+C + S+ +VF E DK+ +SW SM++ YVQN E + F M + +
Sbjct: 306 LVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDH 365
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+ SL++A L L G+ +H Y +K ++ + + L+DMY+KC ++ + VFD
Sbjct: 366 ACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDR 425
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSWT +I Y QS +A+ F + + + + S+L A + L ++++
Sbjct: 426 MRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLL 485
Query: 367 RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN- 425
+ VHS IR GL D + N ++D+Y +C + A IFE +KD++ W S+++ +N
Sbjct: 486 KQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENG 545
Query: 426 ----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
+ PD+V LV ++ A A L ++ G +H + + G V
Sbjct: 546 LLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIR-GKFPVEGAVV 604
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
++L++ Y+ CG A VFD + K+ V W+AMI GM G G ++ +F ML V
Sbjct: 605 SSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVS 664
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
P+ V F +L ACSH+ +V EG M +K P +HY C+VDLL R+G+ EEA +
Sbjct: 665 PDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYK 724
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
F+++MP+EP ++ A L C ++ +L + K+LEL PD YVLVSN++A G+
Sbjct: 725 FIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGK 784
Query: 650 WIRVNQVRELMKQRGLSKSPGCSLVDL 676
W V ++R M ++GL K P CS +++
Sbjct: 785 WNNVKEIRTKMTEQGLRKDPACSWIEI 811
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 187/624 (29%), Positives = 304/624 (48%), Gaps = 40/624 (6%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK----CNTKLVSMYGSFGHVKYARSVFDSMPN 108
L+L+ + ++ + HA + G D TKL+ MYG G + A +FD MP
Sbjct: 62 LDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPA 121
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK----EHDNFVFSKVLKACCELRDIDE 164
+S+ +I + + V Y+ MR D + VLKAC D
Sbjct: 122 RTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRC 181
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD-KNVVSWTSMIAGYV 222
G +VH VK G + V LV MYAKC + S+ +VF+ D ++V SW S I+G V
Sbjct: 182 GSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCV 241
Query: 223 QNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
QN E L LF RM+ +GF + T+G L CA+L L+ G+ LH +LK G E N
Sbjct: 242 QNGMFLEALDLFRRMQSDGFSMNSYTTVGVL-QVCAELAQLNHGRELHAALLKCGTEFNI 300
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
ALL MY +CG + A VF E+ D +SW +M+ Y Q+ +A+ F +
Sbjct: 301 Q-CNALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADA 400
F P+H I S+LSA LG L GR VH+ ++ L+ D + N L+DMY KC+ + +
Sbjct: 360 GFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECS 419
Query: 401 RYIFETTSEKDVIAWNSII-----------------SGLDDNVSPDAVTLVSVISACASL 443
+F+ KD ++W +II + + + D + + S++ AC+ L
Sbjct: 420 ARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGL 479
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
++ + +H+Y+ + GLL ++ + +++ Y +CG+ A +F+ + +K+ VTW++M
Sbjct: 480 KSISLLKQVHSYAIRNGLL--DLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSM 537
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
+ + G ++ALF MLN +QP+ V IL A + + +G + + R K
Sbjct: 538 VNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRG-K 596
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
F +VD+ + G + AL+ + + DV L+ A ++ G++ +
Sbjct: 597 FPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMINATGMHGHGKQAIYIF 655
Query: 624 KKMLE--LHPDKACYYVLVSNLYA 645
K+MLE + PD + L LYA
Sbjct: 656 KRMLETGVSPDHVSFLAL---LYA 676
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/485 (27%), Positives = 236/485 (48%), Gaps = 28/485 (5%)
Query: 46 SLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARS 101
S+ S + +L +C L + HA L+ G N +CN LV MY G V A
Sbjct: 262 SMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALR 320
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VF + + D+ S+ M+ Y N LY + ++F+ M + D+ +L A L
Sbjct: 321 VFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGR 380
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+ G +VH VK D + L+DMY KC + S +VFD K+ VSWT++IA
Sbjct: 381 LINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIAC 440
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
Y Q+ E + F ++ ++ + + +GS++ AC+ L+++ K +H Y ++ G+ ++
Sbjct: 441 YAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LD 499
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
L ++D+Y +CG + A ++F+ L D+V+WT+M+ + ++G +A+ LF
Sbjct: 500 LILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLN 559
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
A P+ V + +L A A L +L G+ +H IR + V+++LVDMY+ C +
Sbjct: 560 AGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNY 619
Query: 400 ARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACAS 442
A +F+ KDV+ W ++I+ L+ VSPD V+ ++++ AC+
Sbjct: 620 ALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSH 679
Query: 443 LGAVQVGS-SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTW 500
V G L +K L + +++ + G + A +M E +V W
Sbjct: 680 SKLVDEGKFYLDMMVSKYKLQPWQEHY-ACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVW 738
Query: 501 SAMIG 505
A++G
Sbjct: 739 CALLG 743
>gi|125554337|gb|EAY99942.1| hypothetical protein OsI_21945 [Oryza sativa Indica Group]
Length = 465
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 177/373 (47%), Positives = 242/373 (64%), Gaps = 6/373 (1%)
Query: 59 CKSTGSLKAFHA--LLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
C + SL+A H LL GL + TKL+S Y + G + AR V D P PD Y+++
Sbjct: 34 CGTLRSLRALHGRLLLRTSGLLRGIRARTKLLSCYAALGDLASARGVLDGTPRPDSYAYR 93
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHD--NFVFSKVLKACCELRDIDEGMKVHCEIV 173
VM+ W + D V ++ MR+R V S LKAC D G ++HC++V
Sbjct: 94 VMLGWLVGAGSHADAVALHRDMRRRCPAAARAEVVLSLALKACVRSADFRYGRRLHCDVV 153
Query: 174 KVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
K GG D FV+ LVDMYAK D+ ++R+VFD ++NVVSWTSM++G +QN A+EGLVL
Sbjct: 154 KAGGADGFVMNSLVDMYAKSGDLENARKVFDRVPERNVVSWTSMLSGSIQNGFAEEGLVL 213
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
FN MR+ V ++ T+ S++ ACA L LHQG+W+HG ++K G+ NS + +LLDMY K
Sbjct: 214 FNEMRKDNVHPSEYTMVSVLAACAMLGCLHQGRWIHGSVIKDGLSTNSFISASLLDMYAK 273
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
C + DAR VFDEL +D+V WTAMIVGYTQ+ P AL+LF KK+ PN VTIA+V
Sbjct: 274 CEKLEDARRVFDELEFVDIVLWTAMIVGYTQNKSPLDALQLFLHKKFVSIVPNSVTIATV 333
Query: 354 LSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDV 412
+SASAQL +L +GR +H++G++LG +E V NALVDMYAKC + +A IF KDV
Sbjct: 334 ISASAQLHHLPLGRSIHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDV 393
Query: 413 IAWNSIISGLDDN 425
+AWNS+++G +N
Sbjct: 394 VAWNSMMAGYSEN 406
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 197/382 (51%), Gaps = 26/382 (6%)
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L+ YA D+ S+R V D T + ++ M+ V + + L MR
Sbjct: 62 TKLLSCYAALGDLASARGVLDGTPRPDSYAYRVMLGWLVGAGSHADAVALHRDMRRRCPA 121
Query: 244 GN--QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
++ L + AC + G+ LH ++K G + ++ +L+DMY K G++ +AR
Sbjct: 122 AARAEVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKSGDLENAR 180
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD + ++VSWT+M+ G Q+G+ ++ L LF + + + P+ T+ SVL+A A LG
Sbjct: 181 KVFDRVPERNVVSWTSMLSGSIQNGFAEEGLVLFNEMRKDNVHPSEYTMVSVLAACAMLG 240
Query: 362 NLNMGRMVHSLGIRLGLEDYTVINA-LVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L+ GR +H I+ GL + I+A L+DMYAKC + DAR +F+ D++ W ++I
Sbjct: 241 CLHQGRWIHGSVIKDGLSTNSFISASLLDMYAKCEKLEDARRVFDELEFVDIVLWTAMIV 300
Query: 421 GLDDNVSP-----------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G N SP ++VT+ +VISA A L + +G S+HA K G +
Sbjct: 301 GYTQNKSPLDALQLFLHKKFVSIVPNSVTIATVISASAQLHHLPLGRSIHAIGVKLGTME 360
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
S+V V AL++ YAKC A +F + K+ V W++M+ GY G SL LF+ M
Sbjct: 361 SDV-VRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRM 419
Query: 524 ----LNEEVQPNEVIFTTILSA 541
L ++ N+ + + SA
Sbjct: 420 RMQGLPKKQNENKAVIPFVWSA 441
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 138/252 (54%), Gaps = 1/252 (0%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV MY G ++ AR VFD +P + S+ M+ N ++ + + MRK
Sbjct: 166 LVDMYAKSGDLENARKVFDRVPERNVVSWTSMLSGSIQNGFAEEGLVLFNEMRKDNVHPS 225
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ VL AC L + +G +H ++K G +SF+ L+DMYAKC + +R+VFD
Sbjct: 226 EYTMVSVLAACAMLGCLHQGRWIHGSVIKDGLSTNSFISASLLDMYAKCEKLEDARRVFD 285
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E ++V WT+MI GY QN + L LF + + N +T+ ++++A A+L L
Sbjct: 286 ELEFVDIVLWTAMIVGYTQNKSPLDALQLFLHKKFVSIVPNSVTIATVISASAQLHHLPL 345
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +K+G + + AL+DMY KC + +A S+F + D+V+W +M+ GY++
Sbjct: 346 GRSIHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSE 405
Query: 325 SGYPDKALKLFT 336
+G +++L LF
Sbjct: 406 NGMANESLVLFN 417
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 150/313 (47%), Gaps = 25/313 (7%)
Query: 253 VTACAKLRALHQGKWLHGYIL--KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
V AC LR+L + LHG +L G+ T LL Y G++ AR V D
Sbjct: 31 VPACGTLRSL---RALHGRLLLRTSGLLRGIRARTKLLSCYAALGDLASARGVLDGTPRP 87
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
D ++ M+ +G A+ L D ++ V ++ L A + + GR
Sbjct: 88 DSYAYRVMLGWLVGAGSHADAVALHRDMRRRCPAAARAEVVLSLALKACVRSADFRYGRR 147
Query: 369 VHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------- 421
+H ++ G D V+N+LVDMYAK + +AR +F+ E++V++W S++SG
Sbjct: 148 LHCDVVKAGGADGFVMNSLVDMYAKSGDLENARKVFDRVPERNVVSWTSMLSGSIQNGFA 207
Query: 422 ----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
DNV P T+VSV++ACA LG + G +H K GL S+N ++ +
Sbjct: 208 EEGLVLFNEMRKDNVHPSEYTMVSVLAACAMLGCLHQGRWIHGSVIKDGL-STNSFISAS 266
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
LL+ YAKC + AR VFD + + V W+AMI GY +L LF + PN
Sbjct: 267 LLDMYAKCEKLEDARRVFDELEFVDIVLWTAMIVGYTQNKSPLDALQLFLHKKFVSIVPN 326
Query: 532 EVIFTTILSACSH 544
V T++SA +
Sbjct: 327 SVTIATVISASAQ 339
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 97/191 (50%), Gaps = 5/191 (2%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+++L C G L + H +I DGL TN + L+ MY ++ AR VFD +
Sbjct: 230 VSVLAACAMLGCLHQGRWIHGSVIKDGLSTNSFISASLLDMYAKCEKLEDARRVFDELEF 289
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D + MI Y N D ++ + + ++ + V+ A +L + G +
Sbjct: 290 VDIVLWTAMIVGYTQNKSPLDALQLFLHKKFVSIVPNSVTIATVISASAQLHHLPLGRSI 349
Query: 169 HCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H VK+G +S V LVDMYAKC+ + + +F L K+VV+W SM+AGY +N A
Sbjct: 350 HAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMA 409
Query: 228 QEGLVLFNRMR 238
E LVLFNRMR
Sbjct: 410 NESLVLFNRMR 420
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 23/242 (9%)
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS-PDAVTLVS---------- 435
L+ YA +A AR + + T D A+ ++ L S DAV L
Sbjct: 64 LLSCYAALGDLASARGVLDGTPRPDSYAYRVMLGWLVGAGSHADAVALHRDMRRRCPAAA 123
Query: 436 --------VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
+ AC + G LH K G ++ +V +L++ YAK GD ++AR
Sbjct: 124 RAEVVLSLALKACVRSADFRYGRRLHCDVVKAG--GADGFVMNSLVDMYAKSGDLENARK 181
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VFD + E+N V+W++M+ G G L LF++M + V P+E ++L+AC+ G
Sbjct: 182 VFDRVPERNVVSWTSMLSGSIQNGFAEEGLVLFNEMRKDNVHPSEYTMVSVLAACAMLGC 241
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
+ +G S+ +D S ++D+ A+ +LE+A + + D+ L+ A +
Sbjct: 242 LHQGRWIHGSVIKDGLSTNSFIS-ASLLDMYAKCEKLEDARRVFDELEFV-DIVLWTAMI 299
Query: 608 HG 609
G
Sbjct: 300 VG 301
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 180/512 (35%), Positives = 286/512 (55%), Gaps = 27/512 (5%)
Query: 189 MYAKCRDIGSSRQVF-DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
MY+KC + + +F D T + NV ++ ++I+G++ N +EG + +MR V ++
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T + AC + + K +HG + K G+E++ + +AL++ Y+K G + A+ F+EL
Sbjct: 61 TFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
D+V W AM+ GY Q G + L+ F P+ T+ +LS A +G+LN GR
Sbjct: 118 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGR 177
Query: 368 MVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS------ 420
++H +++G + V N+L+DMY KC I DA IFE EKD+ +WNSI S
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCG 237
Query: 421 -----------GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS----- 464
L + PD VT+ +V+ AC+ L A+ G +H Y GL
Sbjct: 238 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 297
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+V + A+++ YAKCG + A +VF+ M K+ +W+ MI GYGM G G +L +FS M
Sbjct: 298 DVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 357
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+++P+EV F +LSACSH G V +G M + P+++HY C++D+L RAG+L
Sbjct: 358 EVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQL 417
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA E MPIE + ++ A L C L+ L EV +++ EL P+ YVL+SN+Y
Sbjct: 418 DEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVY 477
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ GR+ V +VR M+Q+ + K+PGCS ++L
Sbjct: 478 GAVGRYEEVLEVRHTMRQQNVRKTPGCSWIEL 509
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 211/445 (47%), Gaps = 30/445 (6%)
Query: 89 MYGSFGHVKYARSVF-DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
MY + +A S+F D + ++F +I + N ++ EFY+ MR D F
Sbjct: 1 MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F +KAC ++ +I K+H + K G D F+ + LV+ Y K + ++ F+E
Sbjct: 61 TFPCAIKACLDVLEIK---KIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEEL 117
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++VV W +M+ GY Q + L F RM + V ++ T+ +++ A + L+ G+
Sbjct: 118 PIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGR 177
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG+ +K+G + + +L+DMY KC I DA +F+ + D+ SW ++ + Q G
Sbjct: 178 IIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCG 237
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-------E 379
D L+L A P+ VT+ +VL A + L L GR +H I GL +
Sbjct: 238 DHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID 297
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------- 422
D + NA++DMYAKC + DA +FE KDV +WN +I G
Sbjct: 298 DVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 357
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ + PD VT V V+SAC+ G V G + A + ++ + T +++ + G
Sbjct: 358 EVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQL 417
Query: 483 QSA-RMVFDAMREKNTVTWSAMIGG 506
A + E N V W A++
Sbjct: 418 DEAYELALTMPIEANPVVWRALLAA 442
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%), Gaps = 8/226 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ L+ MYG ++ A +F+ M D +S+ + + + + M
Sbjct: 195 SNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGI 254
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS------FVLTGLVDMYAKCRD 195
+ D + VL AC L + G ++H ++ G G D + ++DMYAKC
Sbjct: 255 QPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGS 314
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+ + VF+ +K+V SW MI GY + E L +F+RM E ++ +++T +++A
Sbjct: 315 MRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSA 374
Query: 256 CAKLRALHQGK-WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
C+ + QG+ +L K + T ++DM + G + +A
Sbjct: 375 CSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEA 420
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 18/169 (10%)
Query: 66 KAFHALLIVDGLTNDK-------CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
+ H +IV GL D ++ MY G ++ A VF+ M N D S+ +MI
Sbjct: 278 REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMI 337
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG------MKVHCEI 172
Y ++ + +E + M + + D F VL AC + +G MK ++
Sbjct: 338 MGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDV 397
Query: 173 VKVGGPDSFVLTGLVDMYAKCRDIGSSRQV-FDETLDKNVVSWTSMIAG 220
P T ++DM + + + ++ ++ N V W +++A
Sbjct: 398 ----APTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAA 442
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 206/609 (33%), Positives = 318/609 (52%), Gaps = 24/609 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV+ Y G AR VFD MP D S+ ++ N + +D M + +
Sbjct: 160 LVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVN 219
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVF 203
+L AC RD G+ VH ++K G +S V G LVDMY K D+ SS VF
Sbjct: 220 VASLVSILPACGTERDEGFGLCVHGLVLKFG-LNSVVNLGNALVDMYGKFGDLESSMHVF 278
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ +KN VSW S I + ++ L +F M E V +TL SL+ A L H
Sbjct: 279 NGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFH 338
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK LHGY ++ +E + + L+DMY K G A ++F+ + ++VSW AMI T
Sbjct: 339 LGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLT 398
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYT 382
Q+G +A +L + + PN T+ ++L A +++ ++ MG+ +H+ IR L D
Sbjct: 399 QNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLF 458
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NAL+D+YAKC + ARYIF+ SEKD +++N++I G +
Sbjct: 459 VSNALIDVYAKCGQLNLARYIFD-RSEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAG 517
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ DAV+ + +SAC++L A + G +H K+ LL S+ ++ +LL+ Y K G +A
Sbjct: 518 IEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKR-LLDSHPFLANSLLDVYTKGGMLDTA 576
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+F+ + +K+ +W+ MI GYGM G + LF M ++ ++ + V + +LS CSH
Sbjct: 577 SKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHG 636
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V G K F M P HY CMVDLL RAG+L E+ E + NMP + ++GA
Sbjct: 637 GLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGA 695
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ +L + + + EL P+ + YY L+ N+Y+ G W N V++LMK R +
Sbjct: 696 LLGSCRIHGDIELARLAAEHLFELKPENSGYYTLLRNMYSESGMWNEANGVKKLMKSRKV 755
Query: 666 SKSPGCSLV 674
K+P S V
Sbjct: 756 QKNPAYSWV 764
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 246/478 (51%), Gaps = 28/478 (5%)
Query: 164 EGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
+G ++H ++ G D F LV YA C +R+VFDE ++VVSW S+++
Sbjct: 136 KGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSAL 195
Query: 222 VQNDCAQEG-LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
+ N ++ + MR G V N +L S++ AC R G +HG +LK G+
Sbjct: 196 LTNGMLEDAKRAVVGMMRSG-VPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSV 254
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
+L AL+DMY K G++ + VF+ + + VSW + I + +G+ + L++F
Sbjct: 255 VNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSE 314
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
D P VT++S+L A LG ++G+ +H IR +E D + N L+DMYAK
Sbjct: 315 HDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEK 374
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNVS-----------------PDAVTLVSVISACAS 442
A IFE ++V++WN++I+ L N + P++ TLV+++ AC+
Sbjct: 375 ASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSR 434
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
+ +V++G +HA+S ++ L+ S+++V AL++ YAKCG AR +FD EK+ V+++
Sbjct: 435 VASVKMGKQIHAWSIRRSLM-SDLFVSNALIDVYAKCGQLNLARYIFD-RSEKDGVSYNT 492
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC-RD 561
+I GY SL LF M ++ + V F LSACS+ +G + + R
Sbjct: 493 LIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRL 552
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
P + + ++D+ + G L+ A + N + DV+ + + G G++ + D+
Sbjct: 553 LDSHPFLAN--SLLDVYTKGGMLDTASKIF-NRITQKDVASWNTMILGYGMHGQIDVA 607
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 196/562 (34%), Positives = 302/562 (53%), Gaps = 28/562 (4%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
++ M++ E +N F V KAC +L ++ VH +VK D FV T +VDMY
Sbjct: 41 LFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYV 100
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC +G + +F ++V SW SMI G+ Q + LF M + + +T+
Sbjct: 101 KCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIG 160
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L + L+ L + +H + +KIGI+ + + + Y KCG A +VFD ID
Sbjct: 161 LTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFD---GID 217
Query: 312 -----LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
VSW +MI GY KA+ F F + TI S+LS+ Q L G
Sbjct: 218 KGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHG 277
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+++H+ GI++G + D VIN L+ MY+KC I ARY+F+ K ++W ++I+G
Sbjct: 278 KLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEK 337
Query: 422 --LDDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
LD+ ++ PD VT++S++S C GA+++G + Y+T GL N+ V
Sbjct: 338 GDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGL-KDNLMV 396
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
AL++ YAKCG +AR +F M EK+ V+W+ +I G + G+ +L LF M+ +
Sbjct: 397 CNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGL 456
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN + F +L AC+H G + +GW+CF M + +K P + HY CM DLL R GRL+EA
Sbjct: 457 KPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGLDHYSCMADLLGRKGRLKEAF 516
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF++NMP +PDV ++ L C ++ +GE + + EL P A YV ++N+YAS G
Sbjct: 517 EFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFELEPQTAVPYVQMANIYASAG 576
Query: 649 RWIRVNQVRELMKQRGLSKSPG 670
+W RV +R +MK KS G
Sbjct: 577 KWDRVAAIRTMMKCNKAMKSSG 598
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/441 (29%), Positives = 221/441 (50%), Gaps = 25/441 (5%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
V W S I V A + L+LF +M++ +E N +T S+ AC+KL L + +H
Sbjct: 18 TVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVH 77
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
+++K + + + T+++DMYVKC + A ++F + D+ SW +MI G+ Q G+ D
Sbjct: 78 THVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVD 137
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
+ + LF + + VT+ + ++ L +L M +HS GI++G++ D +V N +
Sbjct: 138 RVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWI 197
Query: 389 DMYAKCHVIADARYIFETTSE--KDVIAWNSIISG-----------------LDDNVSPD 429
YAKC A +F+ + K ++WNS+I+G L D
Sbjct: 198 AAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRAD 257
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T++S++S+C + G +HA+ + G S++ V L++ Y+KCGD SAR +F
Sbjct: 258 LSTILSLLSSCVQPEVLFHGKLIHAHGIQVG-CDSDIQVINTLISMYSKCGDIGSARYLF 316
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M K V+W+AMI G +GD ++ LFS M +P+ V +++S C TG +
Sbjct: 317 DNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALE 376
Query: 550 EG-WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
G W Y+ K ++ ++D+ A+ G ++ A E MP + VS + +
Sbjct: 377 LGKWIDTYATANGLK--DNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVS-WTTLIA 433
Query: 609 GCGLYSRFDLGEVMIKKMLEL 629
GC L F + +M+EL
Sbjct: 434 GCALNGEFKEALGLFFQMVEL 454
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 144/527 (27%), Positives = 236/527 (44%), Gaps = 61/527 (11%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T +V MY + +A ++F MP D S+ MI + +V + M
Sbjct: 92 QTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDRVVSLFCEMGIEGI 151
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D+ + + L+D+ +H +K+G D V + YAKC + G +
Sbjct: 152 RADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTDVSVSNTWIAAYAKCGEFGLAET 211
Query: 202 VFDETLDKNV---VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
VFD +DK + VSW SMIAGY + + + F +M G + T+ SL+++C +
Sbjct: 212 VFD-GIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRADLSTILSLLSSCVQ 270
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L GK +H + +++G + + ++ L+ MY KCG+I AR +FD + VSWTAM
Sbjct: 271 PEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAM 330
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I G + G D+A+ LF+ + P+ VTI S++S Q G L +G+ + + GL
Sbjct: 331 IAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGL 390
Query: 379 ED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
+D V NAL+D+YAKC + +AR +F T EK +++W ++I+G N
Sbjct: 391 KDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQ 450
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ P+ +T ++V+ AC G ++ G TK VY L+ Y+
Sbjct: 451 MVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTK-------VYKINPGLDHYSCMA 503
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
D + G G F + N +P+ I++ +LS
Sbjct: 504 D---------------------------LLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLS 536
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMK-HYVCMVDLLARAGRLEE 586
AC V G Y + F+ P YV M ++ A AG+ +
Sbjct: 537 ACKIHQNVVIGECVAYHL---FELEPQTAVPYVQMANIYASAGKWDR 580
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 5/239 (2%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA I G +D + L+SMY G + AR +FD+M S+ MI
Sbjct: 278 KLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEK 337
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VL 183
+ + + M ++ D ++ C + ++ G + G D+ V
Sbjct: 338 GDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALELGKWIDTYATANGLKDNLMVC 397
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+D+YAKC + ++R++F +K++VSWT++IAG N +E L LF +M E ++
Sbjct: 398 NALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCALNGEFKEALGLFFQMVELGLK 457
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL--VTALLDMYVKCGNIRDA 300
N IT +++ AC L +G + K+ +IN L + + D+ + G +++A
Sbjct: 458 PNHITFLAVLQACNHAGFLEKGWECFNLMTKV-YKINPGLDHYSCMADLLGRKGRLKEA 515
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 209/662 (31%), Positives = 342/662 (51%), Gaps = 33/662 (4%)
Query: 52 CLNLLGLCKSTGSL---KAFHALLIVDGLTNDK------CNTKLVSMYGSFGHVKYARSV 102
C +L C +L K H L++ + L D+ ++ MY G A V
Sbjct: 13 CAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDV 72
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL-KACCELRD 161
FD M + + ++ +I + + D + ++ M D F+ +L K R+
Sbjct: 73 FDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERN 132
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+DEG +VH I++ G D V+ +V+MY KC D+ + VFD D NV SWT +IA
Sbjct: 133 LDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAA 192
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG-YILKIGIEI 279
Y QN E L L +RM + V+ + T +++ AC + AL + K LH I G++
Sbjct: 193 YAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDR 252
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
++ + TAL+++Y KCG + +A VF ++ + D+VSW++MI + QSG A++L
Sbjct: 253 DAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMD 312
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIA 398
PN+VT +VL A L G+ +H+ ++ G +D + +ALV MY +
Sbjct: 313 LEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVE 372
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACA 441
AR IFE++ E+DV++W+S+I+G N V P++VT VS I ACA
Sbjct: 373 TARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACA 432
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+GA++ G+ LH GL +V V TAL+N Y KCG + A VF M++KN +TW+
Sbjct: 433 GVGALRRGTQLHERVRCLGL-DKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWT 491
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
++ YG G G SL L M + ++P+ ++F IL +C++ G + +G + M +D
Sbjct: 492 SIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQD 551
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
F P+++H CMVD+L RAG+LE A + + M E ++ L C ++
Sbjct: 552 FGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWM-MLLTACKAHNDTARAAR 610
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL-DIAN 680
+K+ +L P A YVL+S+++ + G W + R M RG+ + G S +++ D +
Sbjct: 611 AAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVH 670
Query: 681 DF 682
+F
Sbjct: 671 EF 672
>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 804
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 312/530 (58%), Gaps = 23/530 (4%)
Query: 162 IDEGMKVHC-EIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
+++ M+V C ++K+G V T L+ Y+ D+G ++F++T K++V W++M++
Sbjct: 25 LEDMMRVICGSVIKLGFESEVSVATALIGFYSD-YDMGIVWKIFNQTPIKDLVLWSAMVS 83
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
V++ E +F M+ VE N +++ S++ ACA + AL GK +HG+ +K
Sbjct: 84 ACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHP 143
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+++ +L+DMY KC N + + VFD++ DL+SWT +I G ++ P +A K F+ +
Sbjct: 144 LTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQ 203
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIA 398
++ F + + ++ A Q G H ++ GL + I AL+ MYAK +
Sbjct: 204 FSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELE 263
Query: 399 DARYIFETTSEKDVIAWNSIIS----------GLDD-------NVSPDAVTLVSVISACA 441
A +F+ ++KD I+W+++IS L+ + P+ +T VS++ AC+
Sbjct: 264 SAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACS 323
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+GA ++G S+ A++TK G LS N ++ +AL++ Y K G R +F+ + K+ V WS
Sbjct: 324 LIGAQELGESIQAHATKAGYLS-NAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWS 382
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
+MI GYG+ G G +L FS+ML V+PNEV+F ++LSACSH G+ EGW CF SM +
Sbjct: 383 SMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQK 442
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC-GLYSRFDLGE 620
+ +P + HY CMVDL++R G +E AL+F+ MP+EPD ++GA L GC + ++ E
Sbjct: 443 YGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAE 502
Query: 621 VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
++ ++++ L P YYV++SNLYA GRW V ++R+L+ ++GL K G
Sbjct: 503 LVAERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEKGLKKEMG 552
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 215/444 (48%), Gaps = 23/444 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+ Y + + +F+ P D + M+ + Y + E ++ M+ E
Sbjct: 49 TALIGFYSDY-DMGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVE 107
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
++ +L AC + + G ++H I K+ P + V LVDMYAKCR+ +S V
Sbjct: 108 PNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLV 167
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD+ L+K+++SWT++I G ++NDC +E F+RM+ ++ + L+ A +
Sbjct: 168 FDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEH 227
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G HG++LK G+ + TALL MY K G + A VFD+L D +SW+AMI +
Sbjct: 228 KFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVH 287
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDY 381
S +P AL+ F + D PN +T S+L A + +G +G + + + G L +
Sbjct: 288 AHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNA 347
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
+ +AL+D+Y K I R IF KD++ W+S+I+G N
Sbjct: 348 FLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLAC 407
Query: 426 -VSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V P+ V +SV+SAC+ G G S + K G++ + +++ ++ G+ +
Sbjct: 408 GVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYA-CMVDLISRRGNIE 466
Query: 484 SARMVFDAMR-EKNTVTWSAMIGG 506
A + M E + W A++ G
Sbjct: 467 GALQFVNKMPMEPDKRIWGALLAG 490
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 191/386 (49%), Gaps = 22/386 (5%)
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N +T+ S++ A + L + + G ++K+G E + TAL+ Y ++ +F
Sbjct: 9 NHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDY-DMGIVWKIF 67
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
++ DLV W+AM+ +SG +A ++F ++ PNHV+I S+L A A +G L
Sbjct: 68 NQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALL 127
Query: 365 MGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G+ +H I+ T V N+LVDMYAKC + +F+ EKD+I+W +II G
Sbjct: 128 FGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCI 187
Query: 424 DNVSP-----------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
+N P D + +I A + G + H + K GLL+ V
Sbjct: 188 ENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAF-V 246
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+GTALL YAK G+ +SA +VFD + +K+ ++WSAMI + +L F M +
Sbjct: 247 SIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQST 306
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
+ +PNE+ F ++L ACS G G + + ++ + ++DL + GR+ +
Sbjct: 307 DERPNEITFVSLLQACSLIGAQELG-ESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQ 365
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGL 612
+P + D+ + + ++G GL
Sbjct: 366 GRAIFNEIPTK-DLVCWSSMINGYGL 390
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 187/386 (48%), Gaps = 20/386 (5%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLI---VDGLTNDKCNTKLVSMYGSFGHVKYARSVF 103
+ +++L C + G+L K H I LTN + LV MY + K + VF
Sbjct: 111 VSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTN--VHNSLVDMYAKCRNFKASMLVF 168
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
D + D S+ +IR ND ++ + + M+ D + ++ A + +
Sbjct: 169 DQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHK 228
Query: 164 EGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
G+ H ++K G +FV G L+ MYAK ++ S+ VFD+ K+ +SW++MI+ +
Sbjct: 229 FGIAFHGFLLK-NGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVH 287
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
+ L F +M+ N+IT SL+ AC+ + A G+ + + K G N+
Sbjct: 288 AHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNA 347
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
L +AL+D+Y K G I R++F+E+ + DLV W++MI GY +G D+AL+ F++
Sbjct: 348 FLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLAC 407
Query: 342 DFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHV 396
PN V SVLSA + G + G M GI L Y +VD+ ++
Sbjct: 408 GVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYA---CMVDLISRRGN 464
Query: 397 IADA-RYIFETTSEKDVIAWNSIISG 421
I A +++ + E D W ++++G
Sbjct: 465 IEGALQFVNKMPMEPDKRIWGALLAG 490
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 165/375 (44%), Gaps = 67/375 (17%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
PNHVT+ SV+ A + LG +M R++ I+LG E + +V AL+ Y+ + + I
Sbjct: 8 PNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSD-YDMGIVWKI 66
Query: 404 FETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV 446
F T KD++ W++++S D V P+ V++VS++ ACA++GA+
Sbjct: 67 FNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGAL 126
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
G +H +S K+ + V +L++ YAKC + +++ +VFD + EK+ ++W+ +I G
Sbjct: 127 LFGKEIHGFSIKK-MFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRG 185
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA-----------CSHTGMVGEGWKCF 555
+ FS M +E I ++ A H ++ G F
Sbjct: 186 CIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAF 245
Query: 556 YS-------MCRDFKFVPSM---------KHYV---CMVDLLARAGRLEEALEFMENMPI 596
S M F + S K Y+ M+ + A + ALE + M
Sbjct: 246 VSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQS 305
Query: 597 ---EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG----- 648
P+ F + L C L +LGE ++ H KA Y +SN + S
Sbjct: 306 TDERPNEITFVSLLQACSLIGAQELGE-----SIQAHATKAGY---LSNAFLSSALIDLY 357
Query: 649 -RWIRVNQVRELMKQ 662
++ R+NQ R + +
Sbjct: 358 CKFGRINQGRAIFNE 372
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 204/626 (32%), Positives = 326/626 (52%), Gaps = 22/626 (3%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H +I G ND T L+ +YG G + AR VFD +P D S+ +I Y
Sbjct: 122 HGRIIKCGFDNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEA 181
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGL 186
+ +E ++ + + D + V +AC +L + +H IV+ L L
Sbjct: 182 NEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSL 241
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
++MY+ C D+ S+ ++F +K +SWTSMI Y ++ +E +F +M E VE N
Sbjct: 242 IEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNV 301
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH-LVTALLDMYVKCGNIRDARSVFD 305
IT+ ++ +C+ L L +GK +H Y LK G+ L L+++Y CG + V
Sbjct: 302 ITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLL 361
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ ++VSW ++ + G ++AL LF + + +++S +SA +G+L +
Sbjct: 362 AIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQL 421
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-LDD 424
GR +H I+ + V NAL+ MY++C A IF +K +AWNSIISG +
Sbjct: 422 GRQIHGYAIKRCILGEFVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQS 481
Query: 425 NVSPDAVTLV----------------SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
S +A+ LV S I ACA + ++ G LH G+ ++Y+
Sbjct: 482 GNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGV-EKDLYI 540
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
TAL + YAKCGD ++A VF +M EK+ V+WSAMI GYGM G ++ F+ M+ +
Sbjct: 541 ETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGI 600
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN + F ILSACSH+G V +G K ++ + RDF PS +H+ C+VDLL+RAG + A
Sbjct: 601 KPNHITFMNILSACSHSGSVEQG-KFYFDLMRDFGVEPSSEHFACLVDLLSRAGDVNGAY 659
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+ + +MP D S+ G L+GC ++ R D+ + K +L++ +Y L+SN+YA G
Sbjct: 660 KIINSMPFPADASVLGNLLNGCRIHQRMDMIPEIEKDLLKIRTSDTGHYSLLSNIYAEIG 719
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLV 674
W R +M++ G K PG S +
Sbjct: 720 NWAARENTRGIMERSGYKKVPGYSAI 745
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/592 (27%), Positives = 307/592 (51%), Gaps = 25/592 (4%)
Query: 59 CKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
CK+ L HA L V L+N + +TKL+ Y G +K + VF++ NPD + + V+
Sbjct: 11 CKTLRQLNQLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVL 70
Query: 118 IRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
I+ + + +++ + Y M + +FVF VL+AC D+ G KVH I+K G
Sbjct: 71 IKCHVWSHAFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGF 130
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D F+ T L+ +Y + + +R+VFD+ +++VSW+S+I+ YV A E L +F
Sbjct: 131 DNDPFIETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRL 190
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+ V+ + + + S+ AC+KL L K +HGYI++ ++ L +L++MY C +
Sbjct: 191 LVNERVKLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDD 250
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ A +F + + +SWT+MI Y +SG+ +A ++F PN +TI VL +
Sbjct: 251 LYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKS 310
Query: 357 SAQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
+ L L G+++H ++ G+ +D + L+++YA C + + E++V++
Sbjct: 311 CSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVS 370
Query: 415 WNSIIS-----GLDDN------------VSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
WN+++S GL + + D +L S ISAC ++G++Q+G +H Y+
Sbjct: 371 WNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAI 430
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K+ +L +V AL+ Y++CG + SA M+F+ +++K++V W+++I G+ G+ ++
Sbjct: 431 KRCILGE--FVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAI 488
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
L M ++ +V+F + + AC+ + +G K + + + + D+
Sbjct: 489 HLVDQMYLNCLKITDVVFLSAIQACADMVCLEKG-KWLHHKLIMYGVEKDLYIETALTDM 547
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
A+ G L A +M E V + A + G G++ R D +M+EL
Sbjct: 548 YAKCGDLRTAEGVFHSMS-EKSVVSWSAMISGYGMHGRIDAAITFFNQMVEL 598
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 166/335 (49%), Gaps = 8/335 (2%)
Query: 53 LNLLGLCKSTGSL------KAFHALLIVDGLT-NDKC-NTKLVSMYGSFGHVKYARSVFD 104
+ ++G+ KS L K H + G+T D C L+ +Y G + Y V
Sbjct: 302 ITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLL 361
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
++ + S+ ++ L+++ + + M+KR D F S + AC + +
Sbjct: 362 AIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQL 421
Query: 165 GMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
G ++H +K FV L+ MY++C S+ +F++ K+ V+W S+I+G+VQ+
Sbjct: 422 GRQIHGYAIKRCILGEFVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQS 481
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ E + L ++M ++ + S + ACA + L +GKWLH ++ G+E + ++
Sbjct: 482 GNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADMVCLEKGKWLHHKLIMYGVEKDLYIE 541
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
TAL DMY KCG++R A VF + +VSW+AMI GY G D A+ F
Sbjct: 542 TALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIK 601
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
PNH+T ++LSA + G++ G+ L G+E
Sbjct: 602 PNHITFMNILSACSHSGSVEQGKFYFDLMRDFGVE 636
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/553 (34%), Positives = 305/553 (55%), Gaps = 25/553 (4%)
Query: 149 FSKVLKACCELRDIDEGMKVH---CEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFD 204
F+ V A + G H C++ G ++ FV T L++MY K I +R+VFD
Sbjct: 123 FAAVFTAAARVPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFD 182
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALH 263
+ +N VSW +M++GY C++E LF M +E +E N+ ++++A + L
Sbjct: 183 QMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLL 242
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G LHG +LK G+ + +L+ MY K + A +VF + ++W+AMI GY
Sbjct: 243 IGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYA 302
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT- 382
Q+G D A +F A F P T +L+AS+ +G L +G+ H L ++LG E
Sbjct: 303 QNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVY 362
Query: 383 VINALVDMYAKCHVIADARYIFETTSE-KDVIAWNSIISGLDDN---------------- 425
V +ALVDMYAKC DA+ F + DV+ W ++I+G N
Sbjct: 363 VKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKE 422
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V P +T+ SV+ ACA L A++ G LHA K G VGTAL Y+KCG+ +
Sbjct: 423 GVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCGF-GLGGSVGTALSTMYSKCGNLED 481
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
+ +VF M +++ ++W+++I G+ G G +L LF +M E + P+ + F +L ACSH
Sbjct: 482 SMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSH 541
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G+V GW F +M +D+ +P + HY C+VD+L+RAG+L+EA +F+E++ I+ L+
Sbjct: 542 MGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWR 601
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
L C FD+G ++++EL + + Y+L+SN+YA+ +W V +VR LM+ RG
Sbjct: 602 IVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRG 661
Query: 665 LSKSPGCSLVDLD 677
+SK PGCS V+L+
Sbjct: 662 VSKDPGCSWVELN 674
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 259/534 (48%), Gaps = 47/534 (8%)
Query: 3 LISLLQRHVSRTKKPKLQLRFF----SYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGL 58
L++ L RH +P L F S T+ PT H F + +PS
Sbjct: 90 LLNPLSRH-----QPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPS--------- 135
Query: 59 CKSTGSLKAFHA--LLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQV 116
S G++ A L G N +T L++MY G + AR VFD MP+ + S+
Sbjct: 136 -ASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAA 194
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
M+ Y ++ E ++ M + E + FV + VL A + G+++H ++K
Sbjct: 195 MVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKD 254
Query: 176 G--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
G G S V LV MYAK + ++ VF + ++N ++W++MI GY QN A +
Sbjct: 255 GLVGFVS-VENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATM 313
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
F +M + T ++ A + + AL GK HG ++K+G E ++ +AL+DMY K
Sbjct: 314 FLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAK 373
Query: 294 CGNIRDARSVFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
CG DA+ F +L + D+V WTAMI G+ Q+G ++AL L++ P+++T+ S
Sbjct: 374 CGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTS 433
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
VL A A L L G+ +H+ ++ G +V AL MY+KC + D+ +F ++D
Sbjct: 434 VLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRD 493
Query: 412 VIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG-SSLH 453
+I+WNSIISG + ++PD +T ++V+ AC+ +G V G
Sbjct: 494 IISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFR 553
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
A S GL+ + +++ ++ G + A+ +++ + T W ++G
Sbjct: 554 AMSKDYGLIPKLDHYAC-IVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGA 606
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 26/214 (12%)
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCH--VIADARYIFETTSE--K 410
A++ + G +H ++ G +T V N+L+ Y ++ A +F +
Sbjct: 23 AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLR 82
Query: 411 DVIAWNSIISGLD------------------DNVSPDAVTLVSVISACASLGAVQVGSSL 452
DV +WNS+++ L D V P + +V +A A + + G+
Sbjct: 83 DVASWNSLLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVA 142
Query: 453 HAYSTK--QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
HA++ K S+NV+V TALLN Y K G AR VFD M +N V+W+AM+ GY
Sbjct: 143 HAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATG 202
Query: 511 GDGGGSLALFSDMLNE-EVQPNEVIFTTILSACS 543
+ LF ML E ++ NE + T +LSA S
Sbjct: 203 KCSEEAFELFRLMLQECPLEKNEFVATAVLSAVS 236
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/628 (30%), Positives = 327/628 (52%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HAL + GL D + + LV MYG + A F MP ++ S+ I N+ Y
Sbjct: 172 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQY 231
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+E + M++ ++ ++C + ++ G ++H +K D V T +
Sbjct: 232 VRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAI 291
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VD+YAK + +R+ F + V + +M+ G V+ E + LF M + +
Sbjct: 292 VDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDV 351
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L + +ACA+ + QG+ +H +K G +++ + A+LD+Y KC + +A +F
Sbjct: 352 VSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQG 411
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I Q+G+ D + F + P+ T SVL A A L +L G
Sbjct: 412 MKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYG 471
Query: 367 RMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
MVH I+ GL D V + +VDMY KC +I +A+ + + + V++WN+I+SG
Sbjct: 472 LMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLN 531
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
LD + PD T +V+ CA+L +++G +H KQ +L Y+
Sbjct: 532 KESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDE-YI 590
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+ L++ YAKCGD + +VF+ + +++ V+W+AMI GY + G G +L +F M E V
Sbjct: 591 SSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENV 650
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
PN F +L ACSH G+ +G + F+ M +K P ++H+ CMVD+L R+ +EA+
Sbjct: 651 VPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAV 710
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+F+ +MP + D ++ L C + ++ E+ +L L PD + Y+L+SN+YA G
Sbjct: 711 KFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESG 770
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W V++ R L+KQ L K PGCS +++
Sbjct: 771 KWADVSRTRRLLKQGRLKKEPGCSWIEV 798
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/554 (28%), Positives = 285/554 (51%), Gaps = 33/554 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++ Y G + A ++FD MP+PD S+ ++ Y ++++ V+ + M +R D
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F+ +LK+C L ++ G++VH VK G D + LVDMY KCR + + F
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++N VSW + IAG VQN+ GL LF M+ + +Q + S +CA + L+
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ LH + +K + + TA++D+Y K ++ DAR F L + + + AM+VG +
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +A+ LF + + V+++ V SA A+ G+ VH L I+ G + D V
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
NA++D+Y KC + +A IF+ +KD ++WN+II+ L+ N +
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T SV+ ACA+L +++ G +H K G L S+ +V + +++ Y KCG A+
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSG-LGSDAFVASTVVDMYCKCGIIDEAQ 507
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+ D + + V+W+A++ G+ + + + FS+ML+ ++P+ F T+L C++
Sbjct: 508 KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLA 567
Query: 547 MVGEGWKCFYSMCR----DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS- 601
+ G + + + D +++ S +VD+ A+ G + ++L E + VS
Sbjct: 568 TIELGKQIHGQIIKQEMLDDEYISST-----LVDMYAKCGDMPDSLLVFEKVEKRDFVSW 622
Query: 602 ---LFGAFLHGCGL 612
+ G LHG G+
Sbjct: 623 NAMICGYALHGLGV 636
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 224/478 (46%), Gaps = 31/478 (6%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D+ ++ Y+ DI ++ +FD D +VVSW ++++GY Q QE + LF M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
V ++ T L+ +C+ L L G +H +K G+EI+ +AL+DMY KC ++
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DA F + + VSW A I G Q+ + L+LF + + + + AS + A
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 359 QLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ LN GR +H+ I+ D V A+VD+YAK + + DAR F V N+
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 418 IISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
++ GL ++ D V+L V SACA G +H + K G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
++ V A+L+ Y KC A ++F M++K++V+W+A+I G ++ F
Sbjct: 382 -FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 440
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGW----KCFYSMCRDFKFVPSMKHYVCMVD 576
++ML ++P++ + ++L AC+ + G K S FV S +VD
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST-----VVD 495
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPD 632
+ + G ++EA + + + + VS + A L G L + + +ML+ L PD
Sbjct: 496 MYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 135/308 (43%), Gaps = 50/308 (16%)
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD--------- 337
LL MY +C AR VFD + D VSW M+ Y+ +G A+ LF
Sbjct: 58 LLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSW 117
Query: 338 -------------KKWADFF---------PNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++ D F P+ T A +L + + L L++G VH+L ++
Sbjct: 118 NALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVK 177
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
GLE D +ALVDMY KC + DA F E++ ++W + I+G N
Sbjct: 178 TGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLEL 237
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
+ + S +CA++ + G LHA++ K SS+ VGTA+++ YA
Sbjct: 238 FIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNK-FSSDRVVGTAIVDVYA 296
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
K AR F + T +AM+ G G G ++ LF M+ ++ + V +
Sbjct: 297 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSG 356
Query: 538 ILSACSHT 545
+ SAC+ T
Sbjct: 357 VFSACAET 364
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 426 VSPDAVTLVSVISACASLG--AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V+P VT V +CA G A+ G + HA G + + +V LL YA+C A
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPT-AFVSNCLLQMYARCAGAA 69
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR VFDAM ++TV+W+ M+ Y GD ++ALF M + P+ V + ++S
Sbjct: 70 CARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD----PDVVSWNALVSGYC 125
Query: 544 HTGMVGEGWKCFYSMCR 560
GM E F M R
Sbjct: 126 QRGMFQESVDLFVEMAR 142
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/601 (33%), Positives = 312/601 (51%), Gaps = 21/601 (3%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH-DNFVFSKV 152
GH+ AR +FD M D S+ +I Y + + + M H D F+ S
Sbjct: 15 GHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLA 74
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
LKAC + G +H VK +S FV + LVDMY K + VF E +NV
Sbjct: 75 LKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNV 134
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
VSWT++IAG V+ +E L F+ M V + T S + ACA AL+ G+ +H
Sbjct: 135 VSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIHCQ 194
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
LK G S + L MY KCG + +F+ + D+VSWT +I+ Q G + A
Sbjct: 195 TLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENA 254
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDM 390
+K F + D PN T A+V+S A LG + G +H+ IR GL D +V N+++ M
Sbjct: 255 VKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAM 314
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTL 433
Y+KC + A +F+ S +D+I+W+++ISG + P+
Sbjct: 315 YSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAF 374
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
SV+S C ++ ++ G LHA+ GL N V +AL+N Y+KCG + A +FD
Sbjct: 375 ASVLSVCGNMAILEQGKQLHAHVLCVGL-EQNTMVQSALINMYSKCGSIKEASKIFDEAE 433
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
N V+W+AMI GY G ++ LF + ++P+ V F +L+ACSH G+V G+
Sbjct: 434 YNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFH 493
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F S+ + + PS HY CM+DLL RAGRL +A +++MP + D ++ L C ++
Sbjct: 494 YFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIH 553
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
D G+ +K+L+L P+ A ++ ++N+YA+ G+W +VR++MK +G+ K PG S
Sbjct: 554 GDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSW 613
Query: 674 V 674
+
Sbjct: 614 I 614
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 253/526 (48%), Gaps = 63/526 (11%)
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR- 238
+ VL LV K + ++RQ+FD+ L ++ +SWT++I+GYV E L LF++M
Sbjct: 5 NLVLKNLV----KTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWV 60
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNI 297
E + + L + AC ++ G+ LHGY +K +NS V +AL+DMY+K G +
Sbjct: 61 EPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDF-VNSVFVGSALVDMYMKIGKV 119
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+ VF E+ ++VSWTA+I G ++GY +AL F+D + T +S L A
Sbjct: 120 DEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKAC 179
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A G LN GR +H ++ G + V N L MY KC + +FE+ +++DV++W
Sbjct: 180 ADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWT 239
Query: 417 SIIS-----GLDDN------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+II G ++N VSP+ T +VIS CA+LG ++ G LHA+ ++
Sbjct: 240 TIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR 299
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
GL+ S + V +++ Y+KC A VF + ++ ++WS MI GY G G +
Sbjct: 300 GLVDS-LSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDY 358
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC---------------------FYSM 558
S M E +PNE F ++LS C + ++ +G + YS
Sbjct: 359 LSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSK 418
Query: 559 CRDFKFVP---------SMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAF 606
C K ++ + M++ A G +EA++ + +P + PD F A
Sbjct: 419 CGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAV 478
Query: 607 LHGCGLYSRFDLGEVMIKKMLELH---PDKACYYVLVSNLYASDGR 649
L C DLG + ++H P K Y ++ +L GR
Sbjct: 479 LAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMI-DLLCRAGR 523
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 224/450 (49%), Gaps = 22/450 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ LV MY G V VF MP + S+ +I K+ + ++ M +
Sbjct: 107 SALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVG 166
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D + FS LKAC + ++ G ++HC+ +K G SFV L MY KC + ++
Sbjct: 167 CDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRL 226
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ ++VVSWT++I VQ + + F RMRE V N+ T ++++ CA L +
Sbjct: 227 FESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRI 286
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ LH ++++ G+ + + +++ MY KC + A +VF L D++SW+ MI GY
Sbjct: 287 EWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGY 346
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
Q G ++A + + PN ASVLS + L G+ +H+ + +GLE T
Sbjct: 347 AQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNT 406
Query: 383 VI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
++ +AL++MY+KC I +A IF+ ++++W ++I+G ++
Sbjct: 407 MVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKV 466
Query: 426 -VSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ PD+VT ++V++AC+ G V +G ++ S + S + G +++ + G
Sbjct: 467 GLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYG-CMIDLLCRAGRLN 525
Query: 484 SARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
A + +M +++ V WS ++ + GD
Sbjct: 526 DAESMIQSMPFQRDDVVWSTLLRACRIHGD 555
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 166/392 (42%), Gaps = 59/392 (15%)
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
+ +L VK G++ +AR +FD++ D +SWT +I GY +AL LF+ K W +
Sbjct: 4 INLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFS-KMWVE- 61
Query: 344 FPNHVTIASVLSASAQLGNLNM----GRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIA 398
P +LS + + LNM G +H ++ + + +ALVDMY K +
Sbjct: 62 -PGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVD 120
Query: 399 DARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACA 441
+ +F+ ++V++W +II+GL V D T S + ACA
Sbjct: 121 EGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACA 180
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
GA+ G +H + K+G + + +V L Y KCG +F++M +++ V+W+
Sbjct: 181 DSGALNYGREIHCQTLKKGFTAVS-FVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWT 239
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK-------- 553
+I G ++ F M +V PNE F ++S C+ G + G +
Sbjct: 240 TIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR 299
Query: 554 -------------CFYSMCRDFKFVPSMKH---------YVCMVDLLARAGRLEEALEFM 591
YS C ++ + M+ A+ G EEA +++
Sbjct: 300 GLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYL 359
Query: 592 ENMPIE---PDVSLFGAFLHGCGLYSRFDLGE 620
M E P+ F + L CG + + G+
Sbjct: 360 SWMRREGPRPNEFAFASVLSVCGNMAILEQGK 391
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/628 (30%), Positives = 327/628 (52%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HAL + GL D + + LV MYG + A F MP ++ S+ I N+ Y
Sbjct: 172 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQY 231
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+E + M++ ++ ++C + ++ G ++H +K D V T +
Sbjct: 232 VRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAI 291
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VD+YAK + +R+ F + V + +M+ G V+ E + LF M + +
Sbjct: 292 VDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDV 351
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L + +ACA+ + QG+ +H +K G +++ + A+LD+Y KC + +A +F
Sbjct: 352 VSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQG 411
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I Q+G+ D + F + P+ T SVL A A L +L G
Sbjct: 412 MKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYG 471
Query: 367 RMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
MVH I+ GL D V + +VDMY KC +I +A+ + + + V++WN+I+SG
Sbjct: 472 LMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLN 531
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
LD + PD T +V+ CA+L +++G +H KQ +L Y+
Sbjct: 532 KESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDE-YI 590
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+ L++ YAKCGD + +VF+ + +++ V+W+AMI GY + G G +L +F M E V
Sbjct: 591 SSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENV 650
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
PN F +L ACSH G+ +G + F+ M +K P ++H+ CMVD+L R+ +EA+
Sbjct: 651 VPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAV 710
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+F+ +MP + D ++ L C + ++ E+ +L L PD + Y+L+SN+YA G
Sbjct: 711 KFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESG 770
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W V++ R L+KQ L K PGCS +++
Sbjct: 771 KWADVSRTRRLLKQGRLKKEPGCSWIEV 798
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/554 (28%), Positives = 285/554 (51%), Gaps = 33/554 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++ Y G + A ++FD MP+PD S+ ++ Y ++++ V+ + M +R D
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 148
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F+ +LK+C L ++ G++VH VK G D + LVDMY KCR + + F
Sbjct: 149 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 208
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++N VSW + IAG VQN+ GL LF M+ + +Q + S +CA + L+
Sbjct: 209 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 268
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ LH + +K + + TA++D+Y K ++ DAR F L + + + AM+VG +
Sbjct: 269 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 328
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +A+ LF + + V+++ V SA A+ G+ VH L I+ G + D V
Sbjct: 329 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 388
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
NA++D+Y KC + +A IF+ +KD ++WN+II+ L+ N +
Sbjct: 389 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 448
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T SV+ ACA+L +++ G +H K G L S+ +V + +++ Y KCG A+
Sbjct: 449 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSG-LGSDAFVASTVVDMYCKCGIIDEAQ 507
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+ D + + V+W+A++ G+ + + + FS+ML+ ++P+ F T+L C++
Sbjct: 508 KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLA 567
Query: 547 MVGEGWKCFYSMCR----DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS- 601
+ G + + + D +++ S +VD+ A+ G + ++L E + VS
Sbjct: 568 TIELGKQIHGQIIKQEMLDDEYISST-----LVDMYAKCGDMPDSLLVFEKVEKRDFVSW 622
Query: 602 ---LFGAFLHGCGL 612
+ G LHG G+
Sbjct: 623 NAMICGYALHGLGV 636
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 224/478 (46%), Gaps = 31/478 (6%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D+ ++ Y+ DI ++ +FD D +VVSW ++++GY Q QE + LF M
Sbjct: 82 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 141
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
V ++ T L+ +C+ L L G +H +K G+EI+ +AL+DMY KC ++
Sbjct: 142 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 201
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DA F + + VSW A I G Q+ + L+LF + + + + AS + A
Sbjct: 202 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 261
Query: 359 QLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ LN GR +H+ I+ D V A+VD+YAK + + DAR F V N+
Sbjct: 262 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 321
Query: 418 IISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
++ GL ++ D V+L V SACA G +H + K G
Sbjct: 322 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 381
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
++ V A+L+ Y KC A ++F M++K++V+W+A+I G ++ F
Sbjct: 382 -FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 440
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGW----KCFYSMCRDFKFVPSMKHYVCMVD 576
++ML ++P++ + ++L AC+ + G K S FV S +VD
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST-----VVD 495
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPD 632
+ + G ++EA + + + + VS + A L G L + + +ML+ L PD
Sbjct: 496 MYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 552
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 139/319 (43%), Gaps = 50/319 (15%)
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G N+ + LL MY +C AR VFD + D VSW M+ Y+ +G A+ LF
Sbjct: 47 GFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALF 106
Query: 336 TD----------------------KKWADFF---------PNHVTIASVLSASAQLGNLN 364
++ D F P+ T A +L + + L L+
Sbjct: 107 DGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELS 166
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
+G VH+L ++ GLE D +ALVDMY KC + DA F E++ ++W + I+G
Sbjct: 167 LGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCV 226
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N + + S +CA++ + G LHA++ K SS+
Sbjct: 227 QNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNK-FSSDR 285
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
VGTA+++ YAK AR F + T +AM+ G G G ++ LF M+
Sbjct: 286 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRS 345
Query: 527 EVQPNEVIFTTILSACSHT 545
++ + V + + SAC+ T
Sbjct: 346 SIRFDVVSLSGVFSACAET 364
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 426 VSPDAVTLVSVISACASLG--AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V+P VT V +CA G A+ G + HA G + N +V LL YA+C A
Sbjct: 11 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVP-NAFVSNCLLQMYARCAGAA 69
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR VFDAM ++TV+W+ M+ Y GD ++ALF M + P+ V + ++S
Sbjct: 70 CARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD----PDVVSWNALVSGYC 125
Query: 544 HTGMVGEGWKCFYSMCR 560
GM E F M R
Sbjct: 126 QRGMFQESVDLFVEMAR 142
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 200/646 (30%), Positives = 339/646 (52%), Gaps = 30/646 (4%)
Query: 54 NLLGLCKSTGSLKA---FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++LG C + L HA + GL + L+SMY G + AR VFD++ +
Sbjct: 307 SILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSL 366
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ ++ MI Y L ++ ++ M ++ + D F ++ +L C + D+D G ++H
Sbjct: 367 NRTTWNAMIAGYG-EGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELH 425
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+I G D V T L+ MYAKC +R+VF++ ++NV+SW + I+ ++D +
Sbjct: 426 SQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGK 485
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E F +MR V + IT +L+ +C L +G+++HG I + G+ N+H+ AL+
Sbjct: 486 EAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALI 545
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
MY +CGN+ DAR VF + DL SW AMI Q G A LF + +
Sbjct: 546 SMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKY 605
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
T +VL A A L +L+ GRM+H L + G +D V+ L+ MY+KC + DA +F T
Sbjct: 606 TFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTV 665
Query: 408 SEKDVIAWNSIIS-------GLD----------DNVSPDAVTLVSVISACASLGAVQVGS 450
EKDV+ WN++++ G D + V+PD+ T + ++ACA L AV+ G
Sbjct: 666 QEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGK 725
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+HA K+ + ++ V +L+ Y++CG SA+ VF+ M ++ +W+A+I GY
Sbjct: 726 KIHA-QLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQN 784
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L + ML + PN+ FT+ILS+ + G + + S+ +++ PS +H
Sbjct: 785 GQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQH 844
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y MV L RAG L+EA EF+E + E ++ + L C ++ +L E ++ +L+
Sbjct: 845 YAYMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVELAETAVEHLLDAK 904
Query: 631 PDKA---CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
+ C ++ ++YA+ GRW V+ ++ M++ GL C++
Sbjct: 905 AQASPAVCEQLM--SIYAAAGRWEDVSVLKTTMQEAGLVALKSCTI 948
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 199/639 (31%), Positives = 330/639 (51%), Gaps = 59/639 (9%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRL 141
N L+SMY G ++ A +VF +M + D S+ MI Y L+ ++ + FY+ R+ L
Sbjct: 138 NNMLISMYSKCGSIEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGL 197
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
K + N F +L AC ++ G ++H I K G D V T L++MY KC + +R
Sbjct: 198 KPNQN-TFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELAR 256
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VF+E ++NVVSWT+MI+GYVQ+ ++E L LF ++ ++ N+++ S++ AC
Sbjct: 257 KVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPN 316
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L +G LH YI + G+E + AL+ MY +CG++ +AR VFD L S++ +W AMI
Sbjct: 317 DLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIA 376
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
GY + G ++A +LF + F P+ T AS+L+ A +L+ G+ +HS G +
Sbjct: 377 GYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQT 435
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-------GLD--------- 423
D TV AL+ MYAKC +AR +F E++VI+WN+ IS G +
Sbjct: 436 DLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMR 495
Query: 424 -DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
D+V+PD +T ++++++C S ++ G +H + G+LS+N +V AL++ Y +CG+
Sbjct: 496 RDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNN-HVANALISMYGRCGNL 554
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
AR VF +R ++ +W+AMI G G + LF +E + ++ F +L A
Sbjct: 555 ADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAV 614
Query: 543 SHT----------GMVGEG-----------WKCFYSMC---RDFKFVPSM---KHYVC-- 573
++ G+V +G YS C RD + V S K VC
Sbjct: 615 ANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWN 674
Query: 574 -MVDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE- 628
M+ A + R ++AL+ + M +E PD S + L+ C + + G+ + ++ E
Sbjct: 675 AMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEA 734
Query: 629 -LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
+ D L+ +Y+ G QV E M R ++
Sbjct: 735 GMETDTRVSNSLIE-MYSRCGCLCSAKQVFEKMLSRDIN 772
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/462 (31%), Positives = 241/462 (52%), Gaps = 21/462 (4%)
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
NF +++ L+ C + + EG KVH + PD ++ L+ MY+KC I + VF
Sbjct: 101 NF-YARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQ 159
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
DK+VVSW +MI+GY + QE LF +M+ ++ NQ T S+++AC AL
Sbjct: 160 AMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEF 219
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H I K G E + ++ TAL++MY KCG++ AR VF+E+ ++VSWTAMI GY Q
Sbjct: 220 GEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQ 279
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
G +AL LF + PN V+ AS+L A +L G +H+ + GLE ++
Sbjct: 280 HGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLV 339
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV----------------S 427
NAL+ MY++C +A+AR +F+ + WN++I+G + +
Sbjct: 340 GNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIAGYGEGLMEEAFRLFRAMEQKGFQ 399
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD T S+++ CA + G LH+ G +++ V TAL++ YAKCG + AR
Sbjct: 400 PDKFTYASLLAICADRADLDRGKELHSQIASTG-WQTDLTVATALISMYAKCGSPEEARK 458
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF+ M E+N ++W+A I G + F M ++V P+ + F T+L++C+
Sbjct: 459 VFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPED 518
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
+ G + + + + + ++ + R G L +A E
Sbjct: 519 LERG-RYIHGKINQWGMLSNNHVANALISMYGRCGNLADARE 559
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 190/378 (50%), Gaps = 8/378 (2%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
I + LL C S L + H + G L+N+ L+SMYG G++ AR VF
Sbjct: 504 ITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYR 563
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ D S+ MI + + ++ R + D + F VL+A L D+D G
Sbjct: 564 IRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDLDAG 623
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H + K G G D VLT L+ MY+KC + + VF +K+VV W +M+A Y +
Sbjct: 624 RMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAYAHS 683
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
D Q+ L LF +M+ V + T + + ACA+L A+ GK +H + + G+E ++ +
Sbjct: 684 DRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVS 743
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+L++MY +CG + A+ VF+++ S D+ SW A+I GY Q+G + AL+ + A
Sbjct: 744 NSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASIV 803
Query: 345 PNHVTIASVLSASAQLGNLNMG-RMVHSLGIRLGLEDYTVINA-LVDMYAKCHVIADA-R 401
PN T S+LS+ AQLG + S+ +E A +V + ++ +A
Sbjct: 804 PNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAGLLKEAEE 863
Query: 402 YIFETTSEKDVIAWNSII 419
+I E ++E + W S++
Sbjct: 864 FIEEISAESAALMWESLL 881
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/554 (34%), Positives = 311/554 (56%), Gaps = 26/554 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D+F F +++A ++H +++G P+ F LV Y + + + +V
Sbjct: 68 DSFTFPPLVRAA---PGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRV 124
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FDE +++V +W +M++G +N A + + L RM V G+ +TL S++ C L
Sbjct: 125 FDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDR 184
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+H Y +K G+ + AL+D+Y K G + +A VF + DLV+W ++I
Sbjct: 185 ALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISAN 244
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE--D 380
Q G A++LF + P+ +T+ S+ SA AQ G+ + VH R G + D
Sbjct: 245 EQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGD 304
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
NA+VDMYAK I A+ +F+ ++DV++WN++I+G N
Sbjct: 305 IIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHN 364
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P T VSV+ A + LG +Q G +HA S K GL + +VYV T L++ YAKCG
Sbjct: 365 HEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGL-NLDVYVTTCLIDLYAKCGKL 423
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A +F+ M ++T W+A+I G G+ G G +L+LFS M EE++P+ V F ++L+AC
Sbjct: 424 VEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAAC 483
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH G+V +G F M + VP KHY CMVD+L RAG+L+EA EF+++MPI+PD ++
Sbjct: 484 SHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAV 543
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L C ++ ++G+V + + EL P+ YYVL+SN+YA G+W V+ VR L+++
Sbjct: 544 WGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRR 603
Query: 663 RGLSKSPGCSLVDL 676
+ L K+PG S +++
Sbjct: 604 QNLQKTPGWSSMEV 617
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 217/483 (44%), Gaps = 26/483 (5%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
L+ S HA + GL N + LV Y FG V A VFD MP D
Sbjct: 75 LVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVP 134
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
++ M+ N D V M D S VL C L D + +H
Sbjct: 135 AWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYA 194
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
VK G + FV L+D+Y K + + VF +++V+W S+I+ Q +
Sbjct: 195 VKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAV 254
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDM 290
LF+ M E V + +TL SL +A A+ K +H Y+ + G ++ + A++DM
Sbjct: 255 ELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDM 314
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVT 349
Y K I A+ VFD L D+VSW +I GY Q+G ++A++++ D P T
Sbjct: 315 YAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGT 374
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
SVL A + LG L G +H+L I+ GL D V L+D+YAKC + +A ++FE
Sbjct: 375 FVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMP 434
Query: 409 EKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSS 451
+ WN+II+GL + + PD VT VS+++AC+ G V G S
Sbjct: 435 RRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRS 494
Query: 452 -LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGM 509
T G++ + T +++ + G A +M K ++ W A++G +
Sbjct: 495 FFDLMQTVYGIVPIAKHY-TCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRI 553
Query: 510 QGD 512
G+
Sbjct: 554 HGN 556
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/624 (33%), Positives = 342/624 (54%), Gaps = 38/624 (6%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND-LYKDIVEFYKCMRKRL 141
+T L+ +Y G +AR++FD M D S+ V+I Y N LY I F +R+
Sbjct: 94 HTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENF 153
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
K + + S +L +C I +G +H +K G G DS + L+ MYAKC D+ +S+
Sbjct: 154 KPNQTTIVS-LLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQ 212
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKL 259
+FDE +K+VVSW +MI Y QN + ++ F M +EGF + +T+ +LV+A A
Sbjct: 213 LLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGF-HPSSVTIMNLVSANAFP 271
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+H Y++K G ++ +VT+L+ +Y K G A+ ++ + DL++ TA+I
Sbjct: 272 ENVH------CYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAII 325
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
Y++ G + A++ F D P+ V + VL + +G H G++ GL
Sbjct: 326 SSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLS 385
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------LDDNV 426
D V N L+ +Y++ I A +F EK +I WNS+ISG L +
Sbjct: 386 NDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEM 445
Query: 427 S-----PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV----YVGTALLNFYA 477
S PDA+T+ S++S C LG +++G +LH+Y +L +NV ++GTAL++ Y+
Sbjct: 446 SMCGKKPDAITIASLLSGCCQLGNLRIGETLHSY-----ILRNNVRVEDFIGTALIDMYS 500
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG A VF +++ TW+A+I GY + G + +S + + ++P+++ F
Sbjct: 501 KCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLG 560
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+L+AC+H G+V G + F M +++ +PS++HY C+V LL + G +EA+EF+ M I+
Sbjct: 561 VLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQ 620
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
PD +++GA L+ C + LGE + KK+ L+ +YVL+SNLYA GRW V +VR
Sbjct: 621 PDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVR 680
Query: 658 ELMKQRGLSKSPGCSLVDLDIAND 681
E+MK G G S++D+ A+D
Sbjct: 681 EMMKDSGGDGCSGVSVIDVISADD 704
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 157/590 (26%), Positives = 280/590 (47%), Gaps = 57/590 (9%)
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
R + + NP+ ++F ++I+ Y + F C + ++ ++ C
Sbjct: 37 RQILQANVNPNEFTFSLLIKAYLSSP------SFTHCPSTAALQ------ARQIQTQCLK 84
Query: 160 RDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
R +++ + VH T L+D+Y K +R +FD+ ++VVSW +I
Sbjct: 85 RGVNQFIHVH--------------TSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLIC 130
Query: 220 GYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
GY QN + LF + +RE F + NQ T+ SL+ +C + QG+ +HG+ +K G
Sbjct: 131 GYSQNGYLYHAIQLFVDMLRENF-KPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFG 189
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
++SHL AL+ MY KC ++ ++ +FDE+ +VSW MI Y Q+G DKA+ F +
Sbjct: 190 LDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEM 249
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVI 397
F P+ VTI +++SA+A N VH ++ G D +V+ +LV +YAK
Sbjct: 250 LKEGFHPSSVTIMNLVSANAFPEN------VHCYVVKCGFTNDASVVTSLVCLYAKQGFT 303
Query: 398 ADARYIFETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISAC 440
A+ +++ KD+I +IIS + ++ PDAV L+ V+
Sbjct: 304 NTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGI 363
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
+ +G + H Y K G LS++ V L++ Y++ + ++A +F MREK +TW
Sbjct: 364 TNPSHFAIGCTFHGYGVKSG-LSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITW 422
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
++MI G G ++ LFS+M +P+ + ++LS C G + G + R
Sbjct: 423 NSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILR 482
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ V ++D+ ++ GRL+ A + N+ +P ++ + A + G LY
Sbjct: 483 NNVRVEDFIG-TALIDMYSKCGRLDYAEKVFYNIK-DPCLATWNAIISGYSLYGLEHTAF 540
Query: 621 VMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
K+ E L PDK + +++ ++ + + K+ GL S
Sbjct: 541 GCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPS 590
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 49 SIPCLNLLGLCKSTGSLK---AFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFD 104
+I +LL C G+L+ H+ ++ + + D T L+ MY G + YA VF
Sbjct: 454 AITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFY 513
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC 156
++ +P ++ +I Y L L Y ++++ + D F VL AC
Sbjct: 514 NIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAAC 565
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 187/628 (29%), Positives = 336/628 (53%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H + + GL N T L+++Y G + A VFD++P + ++ +I Y
Sbjct: 137 HGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQG 196
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+E + M D FV + + AC L ++ G + H ++ D+ V+ L
Sbjct: 197 GVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINAL 256
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+D+Y KC + +R++FD ++N+VSWT+MIAGY+QN C E + +F ++ + + +
Sbjct: 257 IDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDV 316
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
S++ +C L A+ QG+ +H + +K +E + ++ +L+DMY KC ++ +AR+VF+
Sbjct: 317 FACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEA 376
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
L D +S+ AMI GY++ G A+ +F+ ++ P+ +T S+L S+ + +
Sbjct: 377 LAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELS 436
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ +H L ++ G D ++L+D+Y+K ++ DA+ +F +D++ WN++I GL N
Sbjct: 437 KQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQN 496
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
++P+ T V++++ ++L ++ G HA K G S+ +V
Sbjct: 497 EQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGA-DSDHHV 555
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
AL++ YAKCG + R++F++ K+ + W++MI Y G +L +F M V
Sbjct: 556 SNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGV 615
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN V F +LSAC+H G+V EG + F M + P +HY +V+L R+G+L A
Sbjct: 616 EPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAK 675
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF+E MPIEP +++ + L C L+ ++G + L P + VL+SN+YAS G
Sbjct: 676 EFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRG 735
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
W ++R+ M G+ K PG S +++
Sbjct: 736 LWSDAQKLRQGMDCAGVVKEPGYSWIEV 763
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 187/650 (28%), Positives = 309/650 (47%), Gaps = 60/650 (9%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA +V G D L+ Y G V+ AR +FD MP+ + S+ I + +
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 128 KDIVEFYKCMRKRL--KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
+D V + ++ + + F+ + L+AC + R + G +VH V++G + +V T
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+++YAK I ++ VFD KN V+WT++I GY Q L LF +M V
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
++ L S V+AC+ L L G+ HGY +I +E ++ ++ AL+D+Y KC + AR +F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + + +LVSWT MI GY Q+ +A+ +F + P+ AS+L++ L +
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-- 421
GR VH+ I+ LE D V N+L+DMYAKC + +AR +FE +E D I++N++I G
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393
Query: 422 -LDD--------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
L D ++ P +T VS++ +S A+++ +H K G S ++
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSG-TSLDL 452
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
Y G++L++ Y+K + A+ VF+ M ++ V W+AMI G G ++ LF+ +
Sbjct: 453 YAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVS 512
Query: 527 EVQPNEVIFTTILSACS-----------HTGMVGEGWKC----------FYSMCRDFK-- 563
+ PNE F +++ S H ++ G Y+ C K
Sbjct: 513 GLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEG 572
Query: 564 ---FVPSM-KHYVC---MVDLLARAGRLEEAL---EFMENMPIEPDVSLFGAFLHGCGLY 613
F ++ K +C M+ A+ G+ EEAL M +EP+ F L C
Sbjct: 573 RLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHA 632
Query: 614 SRFDLGEV---MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
D G +K + P +Y V NL+ G+ + E M
Sbjct: 633 GLVDEGLRHFDFMKTKYAIEPGTE-HYASVVNLFGRSGKLHAAKEFIERM 681
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 193/628 (30%), Positives = 327/628 (52%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HAL + GL D + + LV MYG + A F MP ++ S+ I N+ Y
Sbjct: 214 HALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQY 273
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+E + M++ ++ ++C + ++ G ++H +K D V T +
Sbjct: 274 VRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAI 333
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VD+YAK + +R+ F + V + +M+ G V+ E + LF M + +
Sbjct: 334 VDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDV 393
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L + +ACA+ + QG+ +H +K G +++ + A+LD+Y KC + +A +F
Sbjct: 394 VSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQG 453
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I Q+G+ D + F + P+ T SVL A A L +L G
Sbjct: 454 MKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYG 513
Query: 367 RMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
MVH I+ GL D V + +VDMY KC +I +A+ + + + V++WN+I+SG
Sbjct: 514 LMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLN 573
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
LD + PD T +V+ CA+L +++G +H KQ +L Y+
Sbjct: 574 KESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDE-YI 632
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+ L++ YAKCGD + +VF+ + +++ V+W+AMI GY + G G +L +F M E V
Sbjct: 633 SSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENV 692
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
PN F +L ACSH G+ +G + F+ M +K P ++H+ CMVD+L R+ +EA+
Sbjct: 693 VPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAV 752
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+F+ +MP + D ++ L C + ++ E+ +L L PD + Y+L+SN+YA G
Sbjct: 753 KFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESG 812
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W V++ R L+KQ L K PGCS +++
Sbjct: 813 KWADVSRTRRLLKQGRLKKEPGCSWIEV 840
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 159/554 (28%), Positives = 285/554 (51%), Gaps = 33/554 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++ Y G + A ++FD MP+PD S+ ++ Y ++++ V+ + M +R D
Sbjct: 131 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPD 190
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F+ +LK+C L ++ G++VH VK G D + LVDMY KCR + + F
Sbjct: 191 RTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFY 250
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++N VSW + IAG VQN+ GL LF M+ + +Q + S +CA + L+
Sbjct: 251 GMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNT 310
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ LH + +K + + TA++D+Y K ++ DAR F L + + + AM+VG +
Sbjct: 311 GRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVR 370
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +A+ LF + + V+++ V SA A+ G+ VH L I+ G + D V
Sbjct: 371 AGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICV 430
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
NA++D+Y KC + +A IF+ +KD ++WN+II+ L+ N +
Sbjct: 431 NNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGM 490
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T SV+ ACA+L +++ G +H K G L S+ +V + +++ Y KCG A+
Sbjct: 491 KPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSG-LGSDAFVASTVVDMYCKCGIIDEAQ 549
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+ D + + V+W+A++ G+ + + + FS+ML+ ++P+ F T+L C++
Sbjct: 550 KLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLA 609
Query: 547 MVGEGWKCFYSMCR----DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS- 601
+ G + + + D +++ S +VD+ A+ G + ++L E + VS
Sbjct: 610 TIELGKQIHGQIIKQEMLDDEYISST-----LVDMYAKCGDMPDSLLVFEKVEKRDFVSW 664
Query: 602 ---LFGAFLHGCGL 612
+ G LHG G+
Sbjct: 665 NAMICGYALHGLGV 678
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 224/478 (46%), Gaps = 31/478 (6%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D+ ++ Y+ DI ++ +FD D +VVSW ++++GY Q QE + LF M
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMA 183
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
V ++ T L+ +C+ L L G +H +K G+EI+ +AL+DMY KC ++
Sbjct: 184 RRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLD 243
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DA F + + VSW A I G Q+ + L+LF + + + + AS + A
Sbjct: 244 DALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCA 303
Query: 359 QLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ LN GR +H+ I+ D V A+VD+YAK + + DAR F V N+
Sbjct: 304 AMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNA 363
Query: 418 IISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
++ GL ++ D V+L V SACA G +H + K G
Sbjct: 364 MMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSG 423
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
++ V A+L+ Y KC A ++F M++K++V+W+A+I G ++ F
Sbjct: 424 -FDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 482
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGW----KCFYSMCRDFKFVPSMKHYVCMVD 576
++ML ++P++ + ++L AC+ + G K S FV S +VD
Sbjct: 483 NEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVAST-----VVD 537
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPD 632
+ + G ++EA + + + + VS + A L G L + + +ML+ L PD
Sbjct: 538 MYCKCGIIDEAQKLHDRIGGQQVVS-WNAILSGFSLNKESEEAQKFFSEMLDMGLKPD 594
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 135/308 (43%), Gaps = 50/308 (16%)
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD--------- 337
LL MY +C AR VFD + D VSW M+ Y+ +G A+ LF
Sbjct: 100 LLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSW 159
Query: 338 -------------KKWADFF---------PNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++ D F P+ T A +L + + L L++G VH+L ++
Sbjct: 160 NALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVK 219
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
GLE D +ALVDMY KC + DA F E++ ++W + I+G N
Sbjct: 220 TGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLEL 279
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
+ + S +CA++ + G LHA++ K SS+ VGTA+++ YA
Sbjct: 280 FIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNK-FSSDRVVGTAIVDVYA 338
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
K AR F + T +AM+ G G G ++ LF M+ ++ + V +
Sbjct: 339 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSG 398
Query: 538 ILSACSHT 545
+ SAC+ T
Sbjct: 399 VFSACAET 406
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 426 VSPDAVTLVSVISACASLG--AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V+P VT V +CA G A+ G + HA G + + +V LL YA+C A
Sbjct: 53 VAPARVTFSRVFQSCAQAGREALAAGRAAHARMVVSGFVPT-AFVSNCLLQMYARCAGAA 111
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR VFDAM ++TV+W+ M+ Y GD ++ALF M + P+ V + ++S
Sbjct: 112 CARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPD----PDVVSWNALVSGYC 167
Query: 544 HTGMVGEGWKCFYSMCR 560
GM E F M R
Sbjct: 168 QRGMFQESVDLFVEMAR 184
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 303/546 (55%), Gaps = 32/546 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
S +LKAC +++ VH I++ G D F+++ + + + + VF+
Sbjct: 28 ISTLLKACTTTSTLEQ---VHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVS 84
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+ V W + I GY +N + LF RM+ ++ T SL+ AC+K+ + +G
Sbjct: 85 SPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVA 144
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
HG ++ G+ + ++T+L+D+Y KCG I AR VFDE+ ++VSWTAMI GY
Sbjct: 145 FHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSD 204
Query: 328 PDKALKLFTDKKWADFFP--NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN 385
+A KLF D P N V+ +++S + G+L R + + +
Sbjct: 205 LVEARKLF------DEMPEKNAVSWNAIISGYVKCGDLRSARKMFD---EMPHRNVVSFT 255
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSP 428
++D YAK +A AR++FE E+DV+AW+++ISG NV P
Sbjct: 256 TMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKP 315
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D +VS++SAC+ +G++++ + Y K + +V AL++ AKCG A +
Sbjct: 316 DEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKL 375
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+ M +++ +++ +M+ G + G G +++LFS MLNE + P++V FT IL+ACS G+V
Sbjct: 376 FEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLV 435
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
EG F SM D+ VPS HY CMVDLL RAGRL+EA E +++MP+EP +GA L
Sbjct: 436 DEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLG 495
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C L+ +LGEV+ ++ EL P A YVL+SN+YA+ +W+ V+ +R M++RG+ K
Sbjct: 496 ACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKI 555
Query: 669 PGCSLV 674
PGCS +
Sbjct: 556 PGCSWI 561
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 247/496 (49%), Gaps = 34/496 (6%)
Query: 40 TFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKY 98
T SF + SI LL C +T +L+ HA +I GL D ++ +++ S + Y
Sbjct: 18 TLRSFDTTSSIS--TLLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSY 75
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
SVF+ + +P + I+ Y N V + M++ D F + ++KAC +
Sbjct: 76 TTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSK 135
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
+ + EG+ H V+ G G D FV+T L+D+Y KC +I +R+VFDE ++NVVSWT+M
Sbjct: 136 VCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAM 195
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
IAGY E LF+ M E N ++ ++++ K L + + +
Sbjct: 196 IAGYASFSDLVEARKLFDEMP----EKNAVSWNAIISGYVKCGDLRSARKMFDEM----P 247
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
N T ++D Y K G++ AR VF+E D+V+W+A+I GY Q+G P++A+K+F +
Sbjct: 248 HRNVVSFTTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLE 307
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT--VINALVDMYAKCH 395
+ P+ + S++SA +Q+G+L + + V + ++ + VI AL+DM AKC
Sbjct: 308 MCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCG 367
Query: 396 VIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVIS 438
+ A +FE ++D+I++ S++ G L++ ++PD V +++
Sbjct: 368 SMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILT 427
Query: 439 ACASLGAVQVGS-SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKN 496
AC+ G V G + T ++ S + +++ + G + A + +M E +
Sbjct: 428 ACSRAGLVDEGCYYFESMKTDYSIVPSPDHYA-CMVDLLGRAGRLKEAYELLKSMPVEPH 486
Query: 497 TVTWSAMIGGYGMQGD 512
W A++G + D
Sbjct: 487 AGAWGALLGACKLHCD 502
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 288/516 (55%), Gaps = 20/516 (3%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-RE 239
+V T L++MY K + +R+VFD +N SW++M+AGY C++E LF M E
Sbjct: 154 YVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE 213
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
E ++ ++++A + L G+ +HG I+K G+ + +L+ MY K G +
Sbjct: 214 CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGA 273
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A VF+ + ++W+AMI GY Q+G D A+ +F+ A F P T VL+AS+
Sbjct: 274 AFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSD 333
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
LG L +G+ H L ++LG E V +ALVDMYAKC IADA+ F+ E D++ W ++
Sbjct: 334 LGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAM 393
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+SG N + P T+ S + ACA + A++ G LH K GL
Sbjct: 394 VSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL 453
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
VG+AL Y+KCG+ + VF + +++ + W+++I G+ G G G+L LF
Sbjct: 454 -GLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFE 512
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+M E P+ + F IL ACSH G+V GW+ F M +D+ P + HY CMVD+L+RA
Sbjct: 513 EMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRA 572
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G L+EA +F+E++ I+ L+ L C FD+G ++++EL + Y+L+S
Sbjct: 573 GMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLS 632
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
N+YAS +W V +VR LM+ RG++K PGCS V+L+
Sbjct: 633 NIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELN 668
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 235/461 (50%), Gaps = 23/461 (4%)
Query: 69 HALL--IVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HAL I ++N T L++MY G V AR VFD MP + +S+ M+ Y
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 199
Query: 127 YKDIVEFYKCMRKRL-KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLT 184
++ + ++ M + E FV + VL A + G ++H IVK G D V
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LV MYAK +G++ VF+ + ++N ++W++MI GY QN A + +F++M
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 319
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ T ++ A + L AL GK HG ++K+G E+ ++ +AL+DMY KCG I DA+ F
Sbjct: 320 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGF 379
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D+L +D+V WTAM+ G+ Q+G ++AL L+ P+ TIAS L A A + L
Sbjct: 380 DQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALE 439
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G+ +H+ ++ GL V +AL MY+KC + D +F ++DVIAWNSIISG
Sbjct: 440 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFS 499
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N PD +T ++++ AC+ +G V G + TK L+ +
Sbjct: 500 QNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRL 559
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+++ ++ G + A+ +++ + T W ++G
Sbjct: 560 DHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGA 600
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 366 GRMVHSLGIRLGLEDYT-VINALVDMYAKCH--VIADARYIFE--TTSEKDVIAWNSIIS 420
G +H+ ++ G + V N+L++ Y+ ++A A +F+ + +DV +WNS+++
Sbjct: 31 GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLN 90
Query: 421 GLDDNVSPDAVT-LVSVISACASLGAVQ----------------VGSSLHAYSTKQGLLS 463
L + DA++ S++S+ L + G++ HA + K
Sbjct: 91 PLSGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAV 150
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
SNVYV T+LLN Y K G AR VFD M ++N+ +WS M+ GY + + LF M
Sbjct: 151 SNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 210
Query: 524 LNE-EVQPNEVIFTTILSACS 543
L E + +E + T +LSA S
Sbjct: 211 LEECPSEKSEFVATAVLSAVS 231
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/630 (32%), Positives = 328/630 (52%), Gaps = 25/630 (3%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA I +GL ++ + LV+MY + A+ VF+S+ + + M+ + N L
Sbjct: 332 HAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLA 391
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++++EF+ M++ + D F F+ + AC L +D G ++H ++K + FV L
Sbjct: 392 QEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANAL 451
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VDMYAK + +R+ F+ + VSW ++I GYVQ + E +F RM V ++
Sbjct: 452 VDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDE 511
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L S+V+ACA ++ QG+ H ++K+G++ ++ ++L+DMYVKCG + AR VF
Sbjct: 512 VSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYS 571
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ ++VS A+I GYT S + ++A+ LF + + P VT A +L LN+G
Sbjct: 572 MPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLG 630
Query: 367 RMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGL- 422
R +H ++ G V +L+ MY AD+ +F E K ++ W ++ISG
Sbjct: 631 RQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYA 690
Query: 423 ----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
DN+ PD T SV+ ACA + ++Q G +H+ G +
Sbjct: 691 QQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEI 750
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQGDGGGSLALFSDMLN 525
++L++ YAKCGD + + VF M +N+V +W++MI G G +L +F M
Sbjct: 751 TC-SSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQ 809
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
+ + P+EV F +LSACSH G V EG K F M ++K P + H CMVD+L R G L
Sbjct: 810 QSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLN 869
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
EA EF+ + + D L+ L C + G+ K++EL P + YVL+S LYA
Sbjct: 870 EAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKPQSSSSYVLLSGLYA 929
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
W + +R MK +G+ K PG S ++
Sbjct: 930 ESENWSGADSLRREMKLKGVKKLPGYSWIE 959
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 164/537 (30%), Positives = 275/537 (51%), Gaps = 58/537 (10%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V +Y G+V +A+ F + D +++ ++ Y + L+ +V+ + CM +
Sbjct: 82 IVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPN 141
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F F+ VL AC L+DI+ G +VHC + K+G G SF GL+DMYAKCR++ +R VFD
Sbjct: 142 EFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFD 201
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALH 263
L+ + VSWT++IAGYV++ E + +F++M R G V +QI L +++ A
Sbjct: 202 GALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVP-DQIALVTVINA-------- 252
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
YV G + DAR +F ++ + ++V+W MI G+
Sbjct: 253 ---------------------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHA 285
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
+ G+ ++A+ F + K ++ SVLSA A L LN G MVH+ I+ GL+D
Sbjct: 286 KRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVY 345
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
+ +ALV+MYAKC + A+ +F + E++++ WN+++ G N
Sbjct: 346 VGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHG 405
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
PD T S+ SACASL + G LH K +SN++V AL++ YAK G + A
Sbjct: 406 PQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNK-FTSNLFVANALVDMYAKSGALKEA 464
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R F+ M+ + V+W+A+I GY + + +F M++ V P+EV +I+SAC++
Sbjct: 465 RKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANV 524
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+G +C + + S ++D+ + G + A + +MP VS+
Sbjct: 525 KEFKQGQQC-HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSI 580
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 185/662 (27%), Positives = 312/662 (47%), Gaps = 60/662 (9%)
Query: 64 SLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
++K F + V + + +++ Y + G + AR +F +PNP+ ++ VMI +
Sbjct: 227 AVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAK 286
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FV 182
++ + F+ ++K + VL A L ++ G VH + +K G D+ +V
Sbjct: 287 RGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYV 346
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ LV+MYAKC + +++QVF+ ++N+V W +M+ G+ QN AQE + F+ M+
Sbjct: 347 GSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGP 406
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ ++ T S+ +ACA L L G LH ++K N + AL+DMY K G +++AR
Sbjct: 407 QPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARK 466
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F+ + D VSW A+IVGY Q Y D+A +F P+ V++AS++SA A +
Sbjct: 467 QFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKE 526
Query: 363 LNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
G+ H L +++GL+ T ++L+DMY KC V+ AR +F + ++V++ N++I+G
Sbjct: 527 FKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAG 586
Query: 422 -----LDDNV-----------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
L++ + P VT ++ C + +G +H K G LSS+
Sbjct: 587 YTMSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSS 646
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V +LL Y + +F ++ K V W+A+I GY Q +L + M
Sbjct: 647 EMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMR 706
Query: 525 NEEVQPNEVIFTTILSACS----------------HTGMVGEGWKC-----FYSMCRD-- 561
++ + P++ F ++L AC+ HTG + C Y+ C D
Sbjct: 707 SDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVK 766
Query: 562 -----FKFVP---SMKHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGC 610
F +P S+ + M+ LA+ G EEALE ME I PD F L C
Sbjct: 767 GSLQVFHEMPRRNSVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSAC 826
Query: 611 GLYSRFDLGEVMIKKML---ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
R G + M+ +L P +V L GRW +N+ E + + G
Sbjct: 827 SHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDIL----GRWGFLNEAEEFINKLGCKA 882
Query: 668 SP 669
P
Sbjct: 883 DP 884
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 167/560 (29%), Positives = 280/560 (50%), Gaps = 64/560 (11%)
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+R++ H+ +F++ KA L+ + +H + +K+G G + +VD+Y KC ++
Sbjct: 38 RRIQAHN--LFNEKPKAV--LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVD 93
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+++ F K+V +W S+++ Y+ + + F M V N+ T +++AC+
Sbjct: 94 FAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACS 153
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
L+ ++ GK +H + K+G S L+DMY KC N+RDAR VFD ++D VSWT
Sbjct: 154 GLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTT 213
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
+I GY + G+P +A+K+F + P+ + + +V++A LG L
Sbjct: 214 LIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRL-------------- 259
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-LDDNVSPDAV----- 431
ADAR +F +V+AWN +ISG + +A+
Sbjct: 260 --------------------ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLE 299
Query: 432 -----------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+L SV+SA ASL + GS +HA + K+G L NVYVG+AL+N YAKC
Sbjct: 300 LKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEG-LDDNVYVGSALVNMYAKCS 358
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+A+ VF+++ E+N V W+AM+GG+ G + FS M QP+E FT+I S
Sbjct: 359 KMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFS 418
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
AC+ + G + M ++ KF ++ +VD+ A++G L+EA + E M I +V
Sbjct: 419 ACASLHYLDFGGQLHTVMIKN-KFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNV 477
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
S + A + G D M ++M+ + PD+ +VS A+ + + Q
Sbjct: 478 S-WNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSAC-ANVKEFKQGQQCHC 535
Query: 659 LMKQRGLSKS--PGCSLVDL 676
L+ + GL S G SL+D+
Sbjct: 536 LLVKVGLDTSTCAGSSLIDM 555
Score = 218 bits (556), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 274/593 (46%), Gaps = 91/593 (15%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
C L+ MY +++ AR VFD N D S+ +I Y
Sbjct: 179 CQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYV------------------- 219
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSR 200
D F E +KV ++ +VG PD L +++ Y + +R
Sbjct: 220 --RDGFPM--------------EAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADAR 263
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++F + + NVV+W MI+G+ + A+E + F +++ ++ + +LGS+++A A L
Sbjct: 264 KLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L+ G +H +K G++ N ++ +AL++MY KC + A+ VF+ L ++V W AM+
Sbjct: 324 MLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-E 379
G+ Q+G + ++ F+ K P+ T S+ SA A L L+ G +H++ I+
Sbjct: 384 GFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTS 443
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
+ V NALVDMYAK + +AR FE D ++WN+II G +
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ V PD V+L S++SACA++ + G H K GL +S G++L++ Y KCG
Sbjct: 504 SNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTC-AGSSLIDMYVKCGVV 562
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+AR VF +M +N V+ +A+I GY M ++ LF ++ ++P EV F +L C
Sbjct: 563 LAARDVFYSMPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGC 621
Query: 543 SHTGMVGEG---------WK-------------CFY----------SMCRDFKFVPSMKH 570
M+ G W C Y ++ + ++ +
Sbjct: 622 DGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVV 681
Query: 571 YVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ ++ A+ E+AL+F ++M I PD + F + L C S G+
Sbjct: 682 WTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQ 734
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 288/516 (55%), Gaps = 20/516 (3%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-RE 239
+V T L++MY K + +R+VFD +N SW++M+AGY C++E LF M E
Sbjct: 48 YVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE 107
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
E ++ ++++A + L G+ +HG I+K G+ + +L+ MY K G +
Sbjct: 108 CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGA 167
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A VF+ + ++W+AMI GY Q+G D A+ +F+ A F P T VL+AS+
Sbjct: 168 AFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSD 227
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
LG L +G+ H L ++LG E V +ALVDMYAKC IADA+ F+ E D++ W ++
Sbjct: 228 LGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAM 287
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+SG N + P T+ S + ACA + A++ G LH K GL
Sbjct: 288 VSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL 347
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
VG+AL Y+KCG+ + VF + +++ + W+++I G+ G G G+L LF
Sbjct: 348 -GLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFE 406
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+M E P+ + F IL ACSH G+V GW+ F M +D+ P + HY CMVD+L+RA
Sbjct: 407 EMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRA 466
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G L+EA +F+E++ I+ L+ L C FD+G ++++EL + Y+L+S
Sbjct: 467 GMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSSAYILLS 526
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
N+YAS +W V +VR LM+ RG++K PGCS V+L+
Sbjct: 527 NIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELN 562
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/460 (31%), Positives = 235/460 (51%), Gaps = 23/460 (5%)
Query: 69 HALL--IVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HAL I ++N T L++MY G V AR VFD MP + +S+ M+ Y
Sbjct: 34 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93
Query: 127 YKDIVEFYKCMRKRL-KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLT 184
++ + ++ M + E FV + VL A + G ++H IVK G D V
Sbjct: 94 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 153
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LV MYAK +G++ VF+ + ++N ++W++MI GY QN A + +F++M
Sbjct: 154 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 213
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ T ++ A + L AL GK HG ++K+G E+ ++ +AL+DMY KCG I DA+ F
Sbjct: 214 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGF 273
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D+L +D+V WTAM+ G+ Q+G ++AL L+ P+ TIAS L A A + L
Sbjct: 274 DQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALE 333
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G+ +H+ ++ GL V +AL MY+KC + D +F ++DVIAWNSIISG
Sbjct: 334 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFS 393
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N PD +T ++++ AC+ +G V G + TK L+ +
Sbjct: 394 QNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRL 453
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIG 505
+++ ++ G + A+ +++ + T W ++G
Sbjct: 454 DHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLG 493
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
HA + K SNVYV T+LLN Y K G AR VFD M ++N+ +WS M+ GY +
Sbjct: 34 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93
Query: 513 GGGSLALFSDMLNE-EVQPNEVIFTTILSACS 543
+ LF ML E + +E + T +LSA S
Sbjct: 94 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVS 125
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 188/530 (35%), Positives = 303/530 (57%), Gaps = 21/530 (3%)
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H +V G + F++T LV+ + I +R++FDE +V W ++I Y +N+
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
++ + ++ MR V + T ++ AC +L +HG I+K G + +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
L+ +Y KCG+I A+ VFD L +VSWT++I GY Q+G +AL++F+ + P
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIF 404
+ + + S+L A + +L GR +H I++GLED ++ +L YAKC ++ A+ F
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFF 313
Query: 405 ETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQ 447
+ +VI WN++ISG + N+ PD+VT+ S + A A +G+++
Sbjct: 314 DQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLE 373
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+ + Y +K S+++V T+L++ YAKCG + AR VFD +K+ V WSAMI GY
Sbjct: 374 LAQWMDDYVSKSNY-GSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGY 432
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G+ G G ++ L+ M V PN+V F +L+AC+H+G+V EGW+ F+ M +DF+ VP
Sbjct: 433 GLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPR 491
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+HY C+VDLL RAG L EA F+ +PIEP VS++GA L C +Y LGE K+
Sbjct: 492 NEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLF 551
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
L P +YV +SNLYAS W V VR LM+++GL+K G S+++++
Sbjct: 552 SLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEIN 601
Score = 256 bits (653), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 228/408 (55%), Gaps = 20/408 (4%)
Query: 65 LKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
L H L++ GL N TKLV+ + G + YAR +FD PD + + +IR Y
Sbjct: 72 LDQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSR 131
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
N++Y+D VE Y+ MR D F F VLKAC EL D +H +I+K G G D FV
Sbjct: 132 NNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFV 191
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
GLV +YAKC IG ++ VFD + +VSWTS+I+GY QN A E L +F++MR V
Sbjct: 192 QNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGV 251
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + I L S++ A + L QG+ +HG+++K+G+E L+ +L Y KCG + A+S
Sbjct: 252 KPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKS 311
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
FD++ + +++ W AMI GY ++G+ ++A+ LF + P+ VT+ S + ASAQ+G+
Sbjct: 312 FFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGS 371
Query: 363 LNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L + + + + D V +L+DMYAKC + AR +F+ S+KDV+ W+++I G
Sbjct: 372 LELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMG 431
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSL 452
V P+ VT + +++AC G V+ G L
Sbjct: 432 YGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWEL 479
>gi|147799847|emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
Length = 546
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 187/530 (35%), Positives = 303/530 (57%), Gaps = 17/530 (3%)
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
S +LKAC +++ VH I++ G D F+++ + + + + VF+
Sbjct: 29 STLLKACTTTSTLEQ---VHARIIRKGLHQDHFLISQFLTLCNSLSNFSYTTSVFNGVSS 85
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+ V W + I GY +N + LF RM+ ++ T SL+ AC+K+ + +G
Sbjct: 86 PSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAF 145
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
HG ++ G+ + ++T+L+D+Y KCG I AR VFDE+ ++VSWTAMI GY
Sbjct: 146 HGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDL 205
Query: 329 DKALKLFTDKKWADFFP--NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA 386
+A KLF D P N V+ +++S + G+L R + + +
Sbjct: 206 VEARKLF------DEMPEKNAVSWNAIISGYVKCGDLRSARKMFD---EMPHRNVVSFTT 256
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--DDNVSPDAVTLVSVISACASLG 444
++D YAK +A AR++FE E+DV+AW+++I + + NV PD +VS++SAC+ +G
Sbjct: 257 MIDGYAKSGDMASARFVFEEAPERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMG 316
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
++++ + Y K + +V AL++ AKCG A +F+ M +++ +++ +M+
Sbjct: 317 SLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMM 376
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G + G G +++LFS MLNE + P++V FT IL+ACS G+V EG F SM D+
Sbjct: 377 QGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSI 436
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
VPS HY CMVDLL RAGRL+EA E +++MP+EP +GA L C L+ +LGEV+
Sbjct: 437 VPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDIELGEVVAD 496
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
++ EL P A YVL+SN+YA+ +W+ V+ +R M++RG+ K PGCS +
Sbjct: 497 QLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 235/512 (45%), Gaps = 81/512 (15%)
Query: 40 TFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKY 98
T SF + SI LL C +T +L+ HA +I GL D ++ +++ S + Y
Sbjct: 18 TLRSFDTTSSIS--TLLKACTTTSTLEQVHARIIRKGLHQDHFLISQFLTLCNSLSNFSY 75
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
SVF+ + +P + I+ Y N V + M++ D F + ++KAC +
Sbjct: 76 TTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSK 135
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
+ + EG+ H V+ G G D FV+T L+D+Y KC +I +R+VFDE ++NVVSWT+M
Sbjct: 136 VCGVKEGVAFHGSAVRCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAM 195
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
IAGY E LF+ M E N ++ ++++
Sbjct: 196 IAGYASFSDLVEARKLFDEMP----EKNAVSWNAIISG---------------------- 229
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
YVKCG++R AR +FDE+ ++VS+T MI GY +SG A +F +
Sbjct: 230 -------------YVKCGDLRSARKMFDEMPHRNVVSFTTMIDGYAKSGDMASARFVFEE 276
Query: 338 KKWADFF----------------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
D P+ + S++SA +Q+G+L + + V + ++ +
Sbjct: 277 APERDVVAWSALIFRVCAEWNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVH 336
Query: 382 T--VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
VI AL+DM AKC + A +FE ++D+I++ S++ G L
Sbjct: 337 RAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRML 396
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGS-SLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
++ ++PD V +++AC+ G V G + T ++ S + +++ + G
Sbjct: 397 NEGLTPDDVAFTVILTACSRAGLVDEGCYYFESMKTDYSIVPSPDHYA-CMVDLLGRAGR 455
Query: 482 AQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ A + +M E + W A++G + D
Sbjct: 456 LKEAYELLKSMPVEPHAGAWGALLGACKLHCD 487
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 201/620 (32%), Positives = 333/620 (53%), Gaps = 28/620 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMR--- 138
++ LV MY G + A +FD M D ++ ++ N + K I + +R
Sbjct: 154 SSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLAG 213
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLTGLVDMYAKCRDIG 197
++ L+AC L ++ G +H VK G D + V++ L MY+KC
Sbjct: 214 DSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTE 273
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+ +F E +K+VVSWT +I Y + A+E + LF M + ++ +++ + +++
Sbjct: 274 DACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLG 333
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
+++GK H I++ + + +L+ MY K + A +VF L D SW+
Sbjct: 334 SSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSL 393
Query: 318 MIVGYTQSGYPDKALKLFTDKKWAD---FFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
M+ GY ++G K L+L+ + D F + ++ S +S+ ++LG L +G+ VH I
Sbjct: 394 MVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSI 453
Query: 375 RLGLEDYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSIISG------------ 421
+ L++ ++ N+L+ MY +C A IF +DV+ WN++IS
Sbjct: 454 KCLLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALS 513
Query: 422 -----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
L ++V P++ TL++VISACA+L A++ G LH+Y GL S+V + TAL++ Y
Sbjct: 514 LYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGL-ESDVSISTALVDMY 572
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
KCG +AR +FD+M +++ VTW+ MI GYGM G+ +L LFS+M ++PN + F
Sbjct: 573 TKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFL 632
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
ILSAC H G+V EG K F M ++ P++KHY CMVDLL ++G L+EA + + MPI
Sbjct: 633 AILSACCHAGLVDEGRKLFIRM-GGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPI 691
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
+PD ++G L C ++ F++G + KK P YY+L+SN Y S +W + ++
Sbjct: 692 KPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDEIEKL 751
Query: 657 RELMKQRGLSKSPGCSLVDL 676
R+ MK G+ K G S VD+
Sbjct: 752 RDTMKNYGVEKGVGWSAVDV 771
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 177/611 (28%), Positives = 302/611 (49%), Gaps = 37/611 (6%)
Query: 64 SLKAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+L HAL GL++ KLVS Y S G +A F + P PD + + ++R +
Sbjct: 30 ALLRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHH 89
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPD 179
+ + ++ MR F A EL + G VH VK G G
Sbjct: 90 CASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDG 149
Query: 180 SF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN-DCAQEGLVLFNRM 237
S V + LV MYA+C +G + ++FDE ++++VV+WT++++G V+N +C + L +
Sbjct: 150 SVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMI 209
Query: 238 REGFVEG---NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
R G N T+ S + AC L L G+ LHGY +K GI + +V+AL MY KC
Sbjct: 210 RLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKC 269
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
DA +F EL D+VSWT +I Y + G +A++LF + + + P+ V ++ VL
Sbjct: 270 DMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVL 329
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVI 413
S N+N G+ H++ IR D +I N+L+ MY K ++ A +F ++D
Sbjct: 330 SGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDE 389
Query: 414 AWNSII-----SGLD---------------DNVSPDAVTLVSVISACASLGAVQVGSSLH 453
+W+ ++ +GLD D D +LVS IS+C+ LG +++G S+H
Sbjct: 390 SWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVH 449
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
YS K LL N + +L+ Y +CG+ + A +F + ++ VTW+A+I Y G
Sbjct: 450 CYSIKC-LLDEN-SITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGR 507
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
+L+L+ ML E+V+PN T++SAC++ + G + +S ++ +
Sbjct: 508 SNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHG-ELLHSYVKNMGLESDVSIST 566
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELH 630
+VD+ + G+L A ++M ++ DV + + G G++ + + +M +
Sbjct: 567 ALVDMYTKCGQLGTARGIFDSM-LQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIK 625
Query: 631 PDKACYYVLVS 641
P+ + ++S
Sbjct: 626 PNSLTFLAILS 636
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 194/383 (50%), Gaps = 23/383 (6%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L+ LG + KAFHA++I + L+SMYG F V A +VF + D
Sbjct: 329 LSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDD 388
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV-----FSKVLKACCELRDIDEGM 166
S+ +M+ Y L +E Y+ M+ R +HD F+ + +C L + G
Sbjct: 389 ESWSLMVAGYCKAGLDVKCLELYRQMQCR--DHDEFLCDITSLVSAISSCSRLGRLRLGQ 446
Query: 167 KVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFD-ETLDKNVVSWTSMIAGYVQND 225
VHC +K ++ + L+ MY +C + + ++F L ++VV+W ++I+ Y
Sbjct: 447 SVHCYSIKCLLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVG 506
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ + L L+ +M V+ N TL ++++ACA L AL G+ LH Y+ +G+E + + T
Sbjct: 507 RSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSIST 566
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY KCG + AR +FD + D+V+W MI GY G ++ALKLF++ + P
Sbjct: 567 ALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKP 626
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-------LEDYTVINALVDMYAKCHVIA 398
N +T ++LSA G ++ GR L IR+G L+ Y +VD+ K ++
Sbjct: 627 NSLTFLAILSACCHAGLVDEGR---KLFIRMGGYRLEPNLKHYA---CMVDLLGKSGLLQ 680
Query: 399 DAR-YIFETTSEKDVIAWNSIIS 420
+A + + D W +++S
Sbjct: 681 EAEDLVLAMPIKPDGGVWGTLLS 703
>gi|242062166|ref|XP_002452372.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
gi|241932203|gb|EES05348.1| hypothetical protein SORBIDRAFT_04g024590 [Sorghum bicolor]
Length = 691
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 205/562 (36%), Positives = 307/562 (54%), Gaps = 24/562 (4%)
Query: 69 HALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFLNDL 126
HAL + L D T LV+MYG FG V A+ +FD + S+ MI Y ND
Sbjct: 123 HALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDR 182
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+D V ++ M + + F FS V+ AC RD + G +VH +V+ G D F
Sbjct: 183 CRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANA 242
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
LVDMY+K DI + VF++ +VVSW ++IAG V + L L +M+ V N
Sbjct: 243 LVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPN 302
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
TL S++ ACA A + G+ +HG+++K + + + L+DMY K G + DAR VFD
Sbjct: 303 VFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFD 362
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLF--TDKKWADFFPNHVTIASVLSASAQLGNL 363
+ DL+ W A+I G + G + L LF K+ D N T+A+VL ++A L +
Sbjct: 363 FMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAAVLKSTASLEAI 422
Query: 364 NMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+ VH+L ++GL D V+N L+D Y KC + A +FE + D+I+ S+++ L
Sbjct: 423 CHTKQVHALAEKIGLLSDSHVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTAL 482
Query: 423 DD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+ PD+ L S+++ACASL A + G +HA+ K+ +S+
Sbjct: 483 SQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKR-QFTSD 541
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
V+ G AL+ YAKCG + A M F + EK V+WSAMIGG G G +L LF ML+
Sbjct: 542 VFAGNALVYTYAKCGSIEDADMAFSGLPEKGVVSWSAMIGGLAQHGHGKRALELFHRMLD 601
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
E V PN + T++LSAC+H G+V + K F SM F + +HY CM+D+L RAG+L+
Sbjct: 602 EGVAPNNITLTSVLSACNHAGLVDDAKKYFESMKEAFGIDRTEEHYACMIDILGRAGKLK 661
Query: 586 EALEFMENMPIEPDVSLFGAFL 607
+A+E + NMP + + +++GA L
Sbjct: 662 DAMELVNNMPFQANAAVWGALL 683
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 171/600 (28%), Positives = 286/600 (47%), Gaps = 33/600 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
L G +S + H+ L+ GL N L+S Y AR+VFD +P+P
Sbjct: 11 LARFGASRSLLAGAHLHSHLLKSGLLASYSN-HLLSFYSRCRLPSAARAVFDEIPDPCHV 69
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
S+ ++ Y N + +D + ++ MR R + + VLK ++R G +VH
Sbjct: 70 SWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAPDVR---FGAQVHALA 126
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET-LDKNVVSWTSMIAGYVQNDCAQEG 230
V D FV LV MY + ++++FDE ++N VSW MI+ YV+ND ++
Sbjct: 127 VATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYVKNDRCRDA 186
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+ +F M N+ +V AC R G+ +HG +++ G + + AL+DM
Sbjct: 187 VGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTGYDKDVFTANALVDM 246
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y K G+I A VF+++ + D+VSW A+I G G+ +AL+L K PN T+
Sbjct: 247 YSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPLGVVPNVFTL 306
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE 409
+SVL A A G N+GR +H I+ + D V LVDMYAK + DAR +F+
Sbjct: 307 SSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVAVGLVDMYAKDGFLDDARKVFDFMPR 366
Query: 410 KDVIAWNSIIS---------------------GLDDNVSPDAVTLVSVISACASLGAVQV 448
+D+I WN++IS GLD +V + TL +V+ + ASL A+
Sbjct: 367 RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDV--NRTTLAAVLKSTASLEAICH 424
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
+HA + K GLLS + +V L++ Y KCG A VF+ + ++ ++M+
Sbjct: 425 TKQVHALAEKIGLLSDS-HVVNGLIDSYWKCGRLDYAIKVFEESCSDDIISSTSMMTALS 483
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G ++ LF ML + ++P+ + +++L+AC+ +G + + + +F +
Sbjct: 484 QCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACASLSAYEQGKQVHAHLIKR-QFTSDV 542
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+V A+ G +E+A +P E V + A + G + + +ML+
Sbjct: 543 FAGNALVYTYAKCGSIEDADMAFSGLP-EKGVVSWSAMIGGLAQHGHGKRALELFHRMLD 601
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 184/400 (46%), Gaps = 41/400 (10%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGI--EINSHLVTALLDMYVKCGNIRDARSVFD 305
T+GS + R+L G LH ++LK G+ ++H LL Y +C AR+VFD
Sbjct: 6 TIGSALARFGASRSLLAGAHLHSHLLKSGLLASYSNH----LLSFYSRCRLPSAARAVFD 61
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ VSW++++ Y+ +G P AL F + N + VL + ++
Sbjct: 62 EIPDPCHVSWSSLVTAYSNNGMPRDALWAFRSMRGRGVPCNEYALPIVLKCAP---DVRF 118
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGLD 423
G VH+L + L +D V NALV MY ++ +A+ IF E E++ ++WN +IS
Sbjct: 119 GAQVHALAVATRLIQDVFVTNALVAMYGGFGMVDEAKRIFDEPGGERNAVSWNGMISAYV 178
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N P+ V++AC + G +H + G +V
Sbjct: 179 KNDRCRDAVGVFREMVWSGERPNEFGFSCVVNACTGSRDWETGRQVHGMVVRTG-YDKDV 237
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ AL++ Y+K GD + A +VF+ + + V+W+A+I G G +L L M
Sbjct: 238 FTANALVDMYSKLGDIEMAAVVFEKIPAADVVSWNALIAGCVTHGHDHRALELLLQMKPL 297
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR----DFKFVPSMKHYVCMVDLLARAG 582
V PN +++L AC+ G G + M + +FV V +VD+ A+ G
Sbjct: 298 GVVPNVFTLSSVLKACAGAGAFNLGRQIHGFMIKADADSDEFVA-----VGLVDMYAKDG 352
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
L++A + + MP D+ L+ A + GC R GEV+
Sbjct: 353 FLDDARKVFDFMP-RRDLILWNALISGCSHDGRH--GEVL 389
>gi|255583011|ref|XP_002532274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528034|gb|EEF30114.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 631
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 206/638 (32%), Positives = 336/638 (52%), Gaps = 76/638 (11%)
Query: 106 MPNPDFYSFQVMIRWY----FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR- 160
MP + S+ ++ Y F + ++F +C + E ++ + V+ AC ++
Sbjct: 1 MPERNLISWSSVVSMYSKRGFSEEALLVFLDFKRCCNENPNE---YILASVISACVQVGG 57
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
ID+ M H VK G + +V T LVD+YAK +I +R VFD L+K+ V+WT++I
Sbjct: 58 SIDKQM--HGFAVKSGFDRNVYVGTSLVDLYAKGGNIDEARLVFDGLLEKSAVTWTTIIT 115
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
V+ ++ L LF++MRE V + L S++ AC++L + GK +HG++L+ GIEI
Sbjct: 116 ACVKRGRSEVSLQLFSQMRETNVVPDGYILSSVLGACSQLEFVQGGKQIHGHVLRRGIEI 175
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ V L+D Y K G ++ AR +FD + +++SWTAMI GY Q+ + +A+KLF +
Sbjct: 176 DVSFVNVLIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMT 235
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIA 398
P+ S+L++ L L +GR VH+ I+ +E D + N L+DMYAKC +
Sbjct: 236 RLGRRPDGFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLN 295
Query: 399 DARYIFETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACA 441
DAR +F+ + ++V+++N++I G +SP +T VS++ A A
Sbjct: 296 DARKVFDDMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASA 355
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+L A+++G +HA TK G +S ++ G+AL++FY+KC AR+VFD M EK+ V W+
Sbjct: 356 TLSALELGKQIHALITKFG-ISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWN 414
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT---------------- 545
AM+ GY Q + +L L++++ E +PN V F + +A S+
Sbjct: 415 AMLFGYTQQLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKT 474
Query: 546 -----------------------------GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
G V +G F SM + F P +HY C+V
Sbjct: 475 GLDSHPFTTNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMPK-FSIKPGTEHYACVVS 533
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
LL R+G+L EA EF+E MP EP+ ++ + L C + +LG+ +K + + +
Sbjct: 534 LLGRSGKLYEAKEFIEKMPTEPEAVVWRSLLSACRVSGNVELGKYAAEKAISIDSTDSGS 593
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
Y L+SN+YAS G W+ V +VRE M G+ K G S +
Sbjct: 594 YTLLSNIYASKGMWVDVKKVRERMDIAGVVKEAGHSWI 631
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/438 (32%), Positives = 226/438 (51%), Gaps = 35/438 (7%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ Y G V+ AR +FD M + + S+ MI Y N ++ V+ + M + + D
Sbjct: 183 LIDFYTKSGKVQSARKLFDGMADRNVISWTAMIAGYMQNSFDREAVKLFIEMTRLGRRPD 242
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
FV + +L +C L ++ G +VH +K D F+ GL+DMYAKC + +R+VFD
Sbjct: 243 GFVCTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVFD 302
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NVVS+ ++I GY + E + LF MR G + + +T SL+ A A L AL
Sbjct: 303 DMTIRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALEL 362
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H I K GI + +AL+D Y KC + DAR VFD++ D+V W AM+ GYTQ
Sbjct: 363 GKQIHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYTQ 422
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-V 383
++ALKL+T+ + ++ PN VT A++ +A++ L +L G+ H+ I+ GL+ +
Sbjct: 423 QLENEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPFT 482
Query: 384 INALVDMYAKCHVIADAR----------YIFETTSEKDVIA----WNSIISGLDDN---- 425
N+L+DMYAKC + DAR + FE+ + + + ++S L +
Sbjct: 483 TNSLIDMYAKCGSLEDARKAFGHVKDGLHYFESMPKFSIKPGTEHYACVVSLLGRSGKLY 542
Query: 426 ----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
P+AV S++SAC G V++G +A + S++ T L N
Sbjct: 543 EAKEFIEKMPTEPEAVVWRSLLSACRVSGNVELGK--YAAEKAISIDSTDSGSYTLLSNI 600
Query: 476 YAKCG---DAQSARMVFD 490
YA G D + R D
Sbjct: 601 YASKGMWVDVKKVRERMD 618
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 170/371 (45%), Gaps = 18/371 (4%)
Query: 52 CLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP 107
C ++L C S +L + HA I + +D L+ MY G + AR VFD M
Sbjct: 246 CTSILTSCGSLEALELGRQVHAYSIKGNVESDIFLQNGLIDMYAKCGSLNDARKVFDDMT 305
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ S+ +I Y + + + ++ MR + F +L A L ++ G +
Sbjct: 306 IRNVVSYNALIEGYSTLEQLSEAMNLFREMRHGMLSPSFLTFVSLLGASATLSALELGKQ 365
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I K G + F + L+D Y+KC + +R VFD+ +K++V W +M+ GY Q
Sbjct: 366 IHALITKFGISMEIFAGSALIDFYSKCSCLMDARLVFDKMTEKDIVVWNAMLFGYTQQLE 425
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+E L L+ ++ + N +T +L TA + L +L G+ H +I+K G++ + +
Sbjct: 426 NEEALKLYTELQISEPKPNVVTFAALTTAASNLASLQHGQQFHNHIIKTGLDSHPFTTNS 485
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL---------KLFTD 337
L+DMY KCG++ DAR F + L + +M + G A KL+
Sbjct: 486 LIDMYAKCGSLEDARKAFGHVKD-GLHYFESMPKFSIKPGTEHYACVVSLLGRSGKLYEA 544
Query: 338 KKWADFFPNH---VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKC 394
K++ + P V S+LSA GN+ +G+ I + D L ++YA
Sbjct: 545 KEFIEKMPTEPEAVVWRSLLSACRVSGNVELGKYAAEKAISIDSTDSGSYTLLSNIYASK 604
Query: 395 HVIADARYIFE 405
+ D + + E
Sbjct: 605 GMWVDVKKVRE 615
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 295/500 (59%), Gaps = 25/500 (5%)
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKL 259
+VFD+ ++N+V+WT MI + Q CA++ + LF M G+V ++ T S+++AC +L
Sbjct: 11 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTEL 69
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC---GNIRDARSVFDELCSIDLVSWT 316
L GK LH ++++G+ ++ + +L+DMY KC G++ D+R VF+++ +++SWT
Sbjct: 70 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 129
Query: 317 AMIVGYTQSGYPDK-ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A+I Y QSG DK A++LF PNH + +SVL A L + G V+S ++
Sbjct: 130 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK 189
Query: 376 LGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPD----- 429
LG+ + N+L+ MYA+ + DAR F+ EK+++++N+I+ G N+ +
Sbjct: 190 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 249
Query: 430 ------------AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
A T S++S AS+GA+ G +H K G SN + AL++ Y+
Sbjct: 250 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQCICNALISMYS 308
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
+CG+ ++A VF+ M ++N ++W++MI G+ G +L +F ML +PNE+ +
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+LSACSH GM+ EG K F SM ++ VP M+HY CMVDLL R+G L EA+EF+ +MP+
Sbjct: 369 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 428
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
D ++ L C ++ +LG + +LE PD Y+L+SNL+AS G+W V ++R
Sbjct: 429 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 488
Query: 658 ELMKQRGLSKSPGCSLVDLD 677
+ MK+R L K GCS ++++
Sbjct: 489 KSMKERNLIKEAGCSWIEVE 508
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 199/374 (53%), Gaps = 23/374 (6%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A VFD MP + ++ +MI + +D ++ + M D F +S VL AC E
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS---SRQVFDETLDKNVVSW 214
L + G ++H ++++G D V LVDMYAKC GS SR+VF++ + NV+SW
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 215 TSMIAGYVQN-DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
T++I Y Q+ +C +E + LF +M G + N + S++ AC L + G+ ++ Y +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K+GI + + +L+ MY + G + DAR FD L +LVS+ A++ GY ++ ++A
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYA 392
LF + + T AS+LS +A +G + G +H ++ G + + + NAL+ MY+
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 308
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVS 435
+C I A +F +++VI+W S+I+G L+ P+ +T V+
Sbjct: 309 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 368
Query: 436 VISACASLGAVQVG 449
V+SAC+ +G + G
Sbjct: 369 VLSACSHVGMISEG 382
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 38/460 (8%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYG---SFGHVKYARSVFDSM 106
++L C G L K H+ +I GL D C LV MY + G V +R VF+ M
Sbjct: 61 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 120
Query: 107 PNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P + S+ +I Y + + K+ +E + M ++F FS VLKAC L D G
Sbjct: 121 PEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTG 180
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+V+ VK+G + V L+ MYA+ + +R+ FD +KN+VS+ +++ GY +N
Sbjct: 181 EQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKN 240
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
++E +LFN + + + + T SL++ A + A+ +G+ +HG +LK G + N +
Sbjct: 241 LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCIC 300
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+ MY +CGNI A VF+E+ +++SWT+MI G+ + G+ +AL++F
Sbjct: 301 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 360
Query: 345 PNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
PN +T +VLSA + +G ++ G+ M GI +E Y +VD+ + ++ +
Sbjct: 361 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA---CMVDLLGRSGLLVE 417
Query: 400 A-RYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
A +I D + W ++ + AC G ++G +
Sbjct: 418 AMEFINSMPLMADALVWRTL------------------LGACRVHGNTELGRHAAEMILE 459
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
Q Y+ L N +A G + + +M+E+N +
Sbjct: 460 QEPDDPAAYI--LLSNLHASAGQWKDVVKIRKSMKERNLI 497
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 185/368 (50%), Gaps = 31/368 (8%)
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A VFD++ +LV+WT MI + Q G A+ LF D + + + P+ T +SVLSA +
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHV---IADARYIFETTSEKDVIAW 415
LG L +G+ +HS IRLGL D V +LVDMYAKC + D+R +FE E +V++W
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 416 NSIISG------------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
+II+ + ++ P+ + SV+ AC +L G +++Y+
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K G+ S N VG +L++ YA+ G + AR FD + EKN V+++A++ GY +
Sbjct: 189 KLGIASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 247
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MV 575
LF+++ + + + F ++LS + G +G+G + R K +C ++
Sbjct: 248 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH---GRLLKGGYKSNQCICNALI 304
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDK 633
+ +R G +E A + M + +V + + + G + M KMLE P++
Sbjct: 305 SMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 363
Query: 634 ACYYVLVS 641
Y ++S
Sbjct: 364 ITYVAVLS 371
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/500 (35%), Positives = 295/500 (59%), Gaps = 25/500 (5%)
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKL 259
+VFD+ ++N+V+WT MI + Q CA++ + LF M G+V ++ T S+++AC +L
Sbjct: 6 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVP-DRFTYSSVLSACTEL 64
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC---GNIRDARSVFDELCSIDLVSWT 316
L GK LH ++++G+ ++ + +L+DMY KC G++ D+R VF+++ +++SWT
Sbjct: 65 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 124
Query: 317 AMIVGYTQSGYPDK-ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A+I Y QSG DK A++LF PNH + +SVL A L + G V+S ++
Sbjct: 125 AIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK 184
Query: 376 LGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPD----- 429
LG+ + N+L+ MYA+ + DAR F+ EK+++++N+I+ G N+ +
Sbjct: 185 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 244
Query: 430 ------------AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
A T S++S AS+GA+ G +H K G SN + AL++ Y+
Sbjct: 245 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQCICNALISMYS 303
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
+CG+ ++A VF+ M ++N ++W++MI G+ G +L +F ML +PNE+ +
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+LSACSH GM+ EG K F SM ++ VP M+HY CMVDLL R+G L EA+EF+ +MP+
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
D ++ L C ++ +LG + +LE PD Y+L+SNL+AS G+W V ++R
Sbjct: 424 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 483
Query: 658 ELMKQRGLSKSPGCSLVDLD 677
+ MK+R L K GCS ++++
Sbjct: 484 KSMKERNLIKEAGCSWIEVE 503
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 199/374 (53%), Gaps = 23/374 (6%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A VFD MP + ++ +MI + +D ++ + M D F +S VL AC E
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS---SRQVFDETLDKNVVSW 214
L + G ++H ++++G D V LVDMYAKC GS SR+VF++ + NV+SW
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 215 TSMIAGYVQN-DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
T++I Y Q+ +C +E + LF +M G + N + S++ AC L + G+ ++ Y +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K+GI + + +L+ MY + G + DAR FD L +LVS+ A++ GY ++ ++A
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYA 392
LF + + T AS+LS +A +G + G +H ++ G + + + NAL+ MY+
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVS 435
+C I A +F +++VI+W S+I+G L+ P+ +T V+
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363
Query: 436 VISACASLGAVQVG 449
V+SAC+ +G + G
Sbjct: 364 VLSACSHVGMISEG 377
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/460 (28%), Positives = 223/460 (48%), Gaps = 38/460 (8%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYG---SFGHVKYARSVFDSM 106
++L C G L K H+ +I GL D C LV MY + G V +R VF+ M
Sbjct: 56 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 115
Query: 107 PNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P + S+ +I Y + + K+ +E + M ++F FS VLKAC L D G
Sbjct: 116 PEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTG 175
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+V+ VK+G + V L+ MYA+ + +R+ FD +KN+VS+ +++ GY +N
Sbjct: 176 EQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKN 235
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
++E +LFN + + + + T SL++ A + A+ +G+ +HG +LK G + N +
Sbjct: 236 LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCIC 295
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+ MY +CGNI A VF+E+ +++SWT+MI G+ + G+ +AL++F
Sbjct: 296 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 355
Query: 345 PNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
PN +T +VLSA + +G ++ G+ M GI +E Y +VD+ + ++ +
Sbjct: 356 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYA---CMVDLLGRSGLLVE 412
Query: 400 A-RYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
A +I D + W ++ + AC G ++G +
Sbjct: 413 AMEFINSMPLMADALVWRTL------------------LGACRVHGNTELGRHAAEMILE 454
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
Q Y+ L N +A G + + +M+E+N +
Sbjct: 455 QEPDDPAAYI--LLSNLHASAGQWKDVVKIRKSMKERNLI 492
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 185/368 (50%), Gaps = 31/368 (8%)
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A VFD++ +LV+WT MI + Q G A+ LF D + + + P+ T +SVLSA +
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHV---IADARYIFETTSEKDVIAW 415
LG L +G+ +HS IRLGL D V +LVDMYAKC + D+R +FE E +V++W
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 416 NSIISG------------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
+II+ + ++ P+ + SV+ AC +L G +++Y+
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K G+ S N VG +L++ YA+ G + AR FD + EKN V+++A++ GY +
Sbjct: 184 KLGIASVNC-VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAF 242
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MV 575
LF+++ + + + F ++LS + G +G+G + R K +C ++
Sbjct: 243 LLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIH---GRLLKGGYKSNQCICNALI 299
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDK 633
+ +R G +E A + M + +V + + + G + M KMLE P++
Sbjct: 300 SMYSRCGNIEAAFQVFNEME-DRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNE 358
Query: 634 ACYYVLVS 641
Y ++S
Sbjct: 359 ITYVAVLS 366
>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
Length = 795
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 203/645 (31%), Positives = 333/645 (51%), Gaps = 30/645 (4%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
+ L C+ S++ H + N ++V YG G V AR+ FD++ + YS
Sbjct: 32 DALRQCQDLESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYS 91
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ M+ Y N Y+ ++ YK M + + V++ VL AC ++ ++EG +H I
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRMDL---QPNPVVYTTVLGACASIKALEEGKAIHSRIS 148
Query: 174 KVGGP--DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
G D + L+ MYAKC + ++++F+ ++V SW +MIA Y Q+ +E +
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAI 208
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
L+ M VE + T S+++AC+ L L QG+ +H I G E++ L ALL MY
Sbjct: 209 RLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMY 265
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
+C + DA +F L D+VSW+AMI + ++ D+A++ ++ + PN+ T A
Sbjct: 266 ARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFA 325
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN--ALVDMYAKCHVIADARYIFETTSE 409
SVL A A +G+L GR VH + G + T++N ALVD+Y + +AR +F+
Sbjct: 326 SVLLACASVGDLRAGRAVHDQILGNGYK-ITLVNGTALVDLYTSYGSLDEARSLFDQIEN 384
Query: 410 KDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSS 451
+D W +I G V + VISACASLGA
Sbjct: 385 RDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQ 444
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
H+ G++S V + T+L+N Y++ G+ +SAR VFD M ++T+ W+ +I GY G
Sbjct: 445 AHSDIEADGMISDFV-LATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHG 503
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+ G +L L+ +M E +P+E+ F +L ACSH G+ +G + F S+ D+ P++ HY
Sbjct: 504 EHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHY 563
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C++DLL+RAGRL +A E + MP+EP+ + + L ++ ++ +L P
Sbjct: 564 SCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDP 623
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YVL+SN++A G + VR M RG+ K G S +++
Sbjct: 624 VDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEV 668
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 338/641 (52%), Gaps = 34/641 (5%)
Query: 67 AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
A H L++ GL D LVS YG+ G V A +FD MP + S+ MIR + N
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSK-------VLKACCELRDIDEGMKVHCEIVKVGGP 178
+ E + + + ++E+ + F VL C R+I G VH VK+
Sbjct: 268 FSE---ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 179 DSFVLT-GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
VL L+DMY+KC I +++ +F +KNVVSW +M+ G+ + +M
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 238 REGF--VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
G V+ +++T+ + V C L K LH Y LK N + A + Y KCG
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
++ A+ VF + S + SW A+I G+ QS P +L K + P+ T+ S+LS
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A ++L +L +G+ VH IR LE D V +++ +Y C + + +F+ +K +++
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 415 WNSIISGLDDNVSPD-----------------AVTLVSVISACASLGAVQVGSSLHAYST 457
WN++I+G N PD ++++ V AC+ L ++++G HAY+
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K LL + ++ +L++ YAK G + VF+ ++EK+T +W+AMI GYG+ G ++
Sbjct: 625 KH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 683
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
LF +M P+++ F +L+AC+H+G++ EG + M F P++KHY C++D+
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 578 LARAGRLEEALEFM-ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
L RAG+L++AL + E M E DV ++ + L C ++ ++GE + K+ EL P+K
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YVL+SNLYA G+W V +VR+ M + L K GCS ++L+
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 844
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 248/492 (50%), Gaps = 27/492 (5%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKC 136
+D T++++MY G +R VFD++ + + + + +I Y N+LY +++E F +
Sbjct: 118 NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 177
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD 195
+ D+F + V+KAC + D+ G+ VH +VK G D FV LV Y
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG----NQITLGS 251
+ + Q+FD ++N+VSW SMI + N ++E +L M E +G + TL +
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
++ CA+ R + GK +HG+ +K+ ++ L AL+DMY KCG I +A+ +F + +
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW M+ G++ G + D + VTI + + L + +
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 370 HSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------- 421
H ++ + + V NA V YAKC ++ A+ +F K V +WN++I G
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 477
Query: 422 ---LDDNVS-------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
LD ++ PD+ T+ S++SAC+ L ++++G +H + + L +++V +
Sbjct: 478 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLS 536
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
+L+ Y CG+ + + +FDAM +K+ V+W+ +I GY G +L +F M+ +Q
Sbjct: 537 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 596
Query: 532 EVIFTTILSACS 543
+ + ACS
Sbjct: 597 GISMMPVFGACS 608
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 211/427 (49%), Gaps = 44/427 (10%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+L+A + +DI+ G K+H ++V D + T ++ MYA C SR VFD
Sbjct: 90 LLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--------GNQITLGSLVTACAKLR 260
KN+ W ++I+ Y +N+ L++ + E F+E + T ++ ACA +
Sbjct: 149 KNLFQWNAVISSYSRNE-------LYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ G +HG ++K G+ + + AL+ Y G + DA +FD + +LVSW +MI
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 321 GYTQSGYPDKALKLFTDKKWAD----FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++ +G+ +++ L + + F P+ T+ +VL A+ + +G+ VH ++L
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 377 GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD------------ 423
L+ V+ NAL+DMY+KC I +A+ IF+ + K+V++WN+++ G
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 424 -------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
++V D VT+++ + C + LH YS KQ + N V A + Y
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV-YNELVANAFVASY 440
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG A+ VF +R K +W+A+IGG+ D SL M + P+
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 537 TILSACS 543
++LSACS
Sbjct: 501 SLLSACS 507
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 423 DDNVSPDAVTLVS-----VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
DD S DA LV ++ A +++G +H + L ++ + T ++ YA
Sbjct: 72 DDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYA 131
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN-EEVQPNEVIFT 536
CG +R VFDA+R KN W+A+I Y L F +M++ ++ P+ +
Sbjct: 132 MCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYP 191
Query: 537 TILSACSHTGMVGEG 551
++ AC+ VG G
Sbjct: 192 CVIKACAGMSDVGIG 206
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/502 (38%), Positives = 285/502 (56%), Gaps = 29/502 (5%)
Query: 203 FDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
F + +DK NV SW S+IA + + E L F+ +R+ + + + + +C+ L
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G+ H G E + + +AL+DMY KCG ++DAR++FDE+ ++VSWT+MI G
Sbjct: 2031 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 2090
Query: 322 YTQSGYPDKALKLF-------TDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSLG 373
Y Q+ D AL LF T+ + + P + V + SVLSA +++ + VH
Sbjct: 2091 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 2150
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII-----SGLDDN-- 425
++ G + V N L+D YAKC ++ +F+ EKD I+WNS+I SGL
Sbjct: 2151 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 2210
Query: 426 -----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
V +AVTL +V+ ACA GA++ G +H K L NV VGT++++
Sbjct: 2211 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDL-EYNVCVGTSIID 2269
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y KCG + A+ FD M+EKN +W+AM+ GYGM G +L +F M+ V+PN +
Sbjct: 2270 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYIT 2329
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
F ++L+ACSH G+V EGW F +M + P ++HY CMVDL RAG L EA ++ M
Sbjct: 2330 FVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRM 2389
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
++PD ++G+ L C ++ DLGE+ +K+ EL PD YYVL+SNLYA GRW V
Sbjct: 2390 KMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVE 2449
Query: 655 QVRELMKQRGLSKSPGCSLVDL 676
++R LMK R L K PG SLV+L
Sbjct: 2450 RMRMLMKNRQLVKPPGFSLVEL 2471
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 197/395 (49%), Gaps = 44/395 (11%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNT-KLVSMYGSFGHVKYARSVFDSMPNPDF 111
L LL CK+ L+ HA +I GL+ND+ T KL+ +Y + G + YA +F + NP
Sbjct: 31 LFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
+++ ++IR +N L + + YK M + D F F V+KAC ID G VH
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS-------------- 216
++K G D FV L+D Y KC + +VF++ +NVVSWT+
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210
Query: 217 -----------------MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
MI GY++N +E L LF RM+ + N+ T+ SL+ AC ++
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L G+ +H Y +K IEI +L TAL+DMY KCG+I+DA VF+ + L +W +MI
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGI 374
G +AL LF++ + + P+ +T VL A + N+ G RM GI
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390
Query: 375 RLGLEDYTVINALVDMYAKCHVIADARYIFETTSE 409
E Y + ++YA+ + + +A F++T E
Sbjct: 391 APIPEHY---ECMTELYARSNNLDEA---FKSTKE 419
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 201/392 (51%), Gaps = 39/392 (9%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F +K+C L D+ G H + G D FV + L+DMY+KC + +R +FDE
Sbjct: 2018 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 2077
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE---GNQITLGSLV-----TACAKL 259
+NVVSWTSMI GYVQN+ A L+LF E E GN + L S+V +AC+++
Sbjct: 2078 LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 2137
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ +HG+++K G + + + L+D Y KCG ++ VFD + D +SW +MI
Sbjct: 2138 SGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMI 2197
Query: 320 VGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
Y QSG +AL++F + N VT+++VL A A G L G+ +H I++ L
Sbjct: 2198 AVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDL 2257
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
E + V +++DMY KC + A+ F+ EK+V +W ++++G
Sbjct: 2258 EYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYK 2317
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVG-----SSLHAYSTKQGLLSSNVYVGTALLNF 475
+ V P+ +T VSV++AC+ G V+ G + H Y + G+ + G +++
Sbjct: 2318 MVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGI----EHYG-CMVDL 2372
Query: 476 YAKCGDAQSARMVFDAMREK-NTVTWSAMIGG 506
+ + G A + M+ K + V W +++G
Sbjct: 2373 FGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 183/387 (47%), Gaps = 53/387 (13%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ C + L Q +H I++ G+ + L L+ +Y G I A +F ++ +
Sbjct: 33 LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+W +I T +G ++AL L+ + + T V+ A ++++G++VH
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 372 LGIRLGLE-DYTVINALVDMYAKC-HV------------------------------IAD 399
I+ G D V N L+D Y KC H + +
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 400 ARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACAS 442
AR IF+ K+V++W ++I+G +N+ P+ T+VS+I AC
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
+G + +G +H Y+ K + VY+GTAL++ Y+KCG + A VF+ M K+ TW++
Sbjct: 270 MGILTLGRGIHDYAIKN-CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI G+ G G +L LFS+M V+P+ + F +L AC H V EG F M + +
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALE 589
P +HY CM +L AR+ L+EA +
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAFK 415
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 186/372 (50%), Gaps = 24/372 (6%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H V G D ++ L+ MY G +K AR++FD +P + S+ MI Y N+
Sbjct: 2038 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 2097
Query: 128 KDIVEFYKCMRKRLKE--------HDNFVFSKVLKACCEL--RDIDEGMKVHCEIVKVGG 177
+ + +K + E D+ V VL AC + + I EG VH +VK G
Sbjct: 2098 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHGFVVKKGF 2155
Query: 178 PDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
S V L+D YAKC S++VFD +K+ +SW SMIA Y Q+ + E L +F+
Sbjct: 2156 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 2215
Query: 237 M-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
M R V N +TL +++ ACA AL GK +H ++K+ +E N + T+++DMY KCG
Sbjct: 2216 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 2275
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+ A+ FD + ++ SWTAM+ GY G +AL +F A PN++T SVL+
Sbjct: 2276 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 2335
Query: 356 ASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEK 410
A + G + G M H I G+E Y +VD++ + + +A + + K
Sbjct: 2336 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY---GCMVDLFGRAGCLNEAYNLIKRMKMK 2392
Query: 411 -DVIAWNSIISG 421
D + W S++
Sbjct: 2393 PDFVVWGSLLGA 2404
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 59/287 (20%)
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII- 419
N R +H+ IR GL D + L+ +Y+ IA A +F WN II
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 420 ----SGLDDN------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
+GL + ++ D T VI AC + ++ +G +H K G S
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF-S 157
Query: 464 SNVYVGTALLNFYAKCG-------------------------------DAQSARMVFDAM 492
+V+V L++FY KCG D Q AR +FD +
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
KN V+W+AMI GY +L LF M E + PNE +++ AC+ G++ G
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG- 276
Query: 553 KCFYSMCRDFKFVPSMKHYV----CMVDLLARAGRLEEALEFMENMP 595
D+ ++ V ++D+ ++ G +++A+E E MP
Sbjct: 277 ----RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 20/257 (7%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T ++S S G ++ AR +FD +P+ + S+ MI Y N ++ +E +K M+
Sbjct: 195 TTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIF 254
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVK----VGGPDSFVLTGLVDMYAKCRDIGSS 199
+ + ++KAC E+ + G +H +K +G ++ T L+DMY+KC I +
Sbjct: 255 PNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIG---VYLGTALIDMYSKCGSIKDA 311
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
+VF+ K++ +W SMI + QE L LF+ M V+ + IT ++ AC +
Sbjct: 312 IEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHI 371
Query: 260 RALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-------- 310
+ + +G + GI + ++Y + N+ +A E+ S+
Sbjct: 372 KNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSICF 431
Query: 311 ----DLVSWTAMIVGYT 323
V+WT ++ T
Sbjct: 432 DARAKQVAWTQLLFDTT 448
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 26/175 (14%)
Query: 400 ARYIFETTSEKDVIAWNSIISGL---DDNVS--------------PDAVTLVSVISACAS 442
A + ++ + +V +WNS+I+ L D+V P + I +C++
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L + G H + G ++++V +AL++ Y+KCG + AR +FD + +N V+W++
Sbjct: 2028 LCDLVSGRMSHQQAFVFG-FETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTS 2086
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNE--------VIFTTILSACSHTGMVG 549
MI GY +L LF D L EE + + V+ ++LSACS G
Sbjct: 2087 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG 2141
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 59 CKSTGSLKA---FHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C G+L+A H +I L + C T ++ MY G V+ A+ FD M + S+
Sbjct: 2236 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 2295
Query: 115 QVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M+ Y ++ K+ ++ FYK +R +K + F VL AC ++EG
Sbjct: 2296 TAMVAGYGMHGRAKEALDIFYKMVRAGVKP-NYITFVSVLAACSHAGLVEEG 2346
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 185/516 (35%), Positives = 287/516 (55%), Gaps = 20/516 (3%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-RE 239
FV T L++MY K I ++ VFDE +N VSW +M+AGY C+QE LF +M E
Sbjct: 154 FVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGE 213
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
+ N+ ++++A + L G +HG ++K G+ + +L+ MY K G +
Sbjct: 214 CPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDA 273
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A VF+ + ++W+AMI GY+Q+G + A+++F+ A F P T+ VL+A +
Sbjct: 274 AFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSD 333
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+G L G+ H L ++LG E V +ALVDMYAKC I DA+ F SE D++ W ++
Sbjct: 334 VGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAM 393
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
++G N V P+ +T+ S++ ACA L A++ G LH K G
Sbjct: 394 VTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGF 453
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
VG+AL Y+KCG+ + +VF M ++ + W+++I G+ G G ++ LF
Sbjct: 454 -GLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFE 512
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+M E P+ V F +L ACSH G+V GW F SM +D+ P + HY CMVD+L+RA
Sbjct: 513 EMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHYACMVDILSRA 572
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G L EA +F+E++ I+ L+ L C FD+G +K+++L + Y+L+S
Sbjct: 573 GMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILLS 632
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
N+YA+ +W V +VR LMK G+SK PGCS V+L+
Sbjct: 633 NIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELN 668
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 212/393 (53%), Gaps = 22/393 (5%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
+N +T L++MY G + A+ VFD MP+ + S+ M+ Y ++ E ++ M
Sbjct: 151 SNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQM 210
Query: 138 RKRLKEHDN-FVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCR 194
H N FV + VL A + G++VH +VK G G S V LV MYAK
Sbjct: 211 LGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVS-VENSLVTMYAKAG 269
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
+ ++ VF+ + ++N ++W++MI GY QN A+ + +F++M + TL ++
Sbjct: 270 CMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLN 329
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
AC+ + L +GK HG ++K+G E+ ++ +AL+DMY KCG I DA+ F++ +D+V
Sbjct: 330 ACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVL 389
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
WTAM+ G+ Q+G ++AL L+ FPN +TI S+L A A L L G+ +H+ +
Sbjct: 390 WTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQIL 449
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------- 425
+ G +V +AL MY+KC + D +F +DVIAWNSIISG N
Sbjct: 450 KFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAIN 509
Query: 426 ---------VSPDAVTLVSVISACASLGAVQVG 449
+PD VT ++V+ AC+ +G V G
Sbjct: 510 LFEEMKLEGTAPDPVTFINVLCACSHMGLVDRG 542
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 185/347 (53%), Gaps = 10/347 (2%)
Query: 69 HALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L++ DG+ LV+MY G + A VF+S + ++ MI Y N
Sbjct: 243 HGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNA 302
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGL 186
+ V + M F VL AC ++ + EG + H +VK+G +V + L
Sbjct: 303 ESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSAL 362
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VDMYAKC IG +++ F++ + ++V WT+M+ G+VQN ++ L+L+ RM + V N
Sbjct: 363 VDMYAKCGCIGDAKECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNT 422
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+T+ SL+ ACA L AL GK LH ILK G + + + +AL MY KCGN+ D VF
Sbjct: 423 LTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRR 482
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D+++W ++I G++Q+G + A+ LF + K P+ VT +VL A + +G ++ G
Sbjct: 483 MPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRG 542
Query: 367 -----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS 408
M+ G+ L+ Y +VD+ ++ ++++A+ E+ +
Sbjct: 543 WTYFRSMIKDYGLTPRLDHYAC---MVDILSRAGMLSEAKDFIESIT 586
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 145/327 (44%), Gaps = 32/327 (9%)
Query: 366 GRMVHSLGIRLGLEDYT-VINALVDMYAKCHVI----ADARYIFETTSEKDVIAWNSIIS 420
G +H+ ++ G + V N+L+ Y+ + A A + + +DV +WNS+++
Sbjct: 31 GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90
Query: 421 GLDDNVSPDAVT-LVSVISACASLGAVQVGSS----------------LHAYSTKQGLLS 463
L + A++ S++S+ L + ++ +HA + K S
Sbjct: 91 PLSHHRPLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSAS 150
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
SNV+V TALLN Y K G A++VFD M +N V+W+AM+ GY + + LF M
Sbjct: 151 SNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQM 210
Query: 524 LNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
L E + NE + T +LSA S + G + + +D V + +V + A+AG
Sbjct: 211 LGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKD-GMVGFVSVENSLVTMYAKAG 269
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH----PDKACYYV 638
++ A E+ E + + A + G YS+ E ++ ++H P V
Sbjct: 270 CMDAAFHVFESSK-ERNSITWSAMITG---YSQNGNAESAVRMFSQMHAAGFPPTEFTLV 325
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGL 665
V N + G + Q LM + G
Sbjct: 326 GVLNACSDVGTLMEGKQAHGLMVKLGF 352
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 218/682 (31%), Positives = 345/682 (50%), Gaps = 48/682 (7%)
Query: 35 HELDQTF----ASFHSLP---SIPCLNLLGLCKSTGSLK---AFHALLIVDGLTNDK-CN 83
HE+ + F + H LP + PC+ + C + A H L++ GL D
Sbjct: 168 HEVLEMFIKMISKTHLLPDNFTFPCV--IKACAGISDVGIGLAVHGLVVKTGLVEDLFVG 225
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
LVS YG+ G V A +FD MP + S+ MIR + N D F
Sbjct: 226 NALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG---DDGAFMP-------- 274
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT-GLVDMYAKCRDIGSSRQV 202
D VL C R+I G VH VK+ V+ L+DMY+K I S+ +
Sbjct: 275 -DVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMI 333
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF--VEGNQITLGSLVTACAKLR 260
F +KNVVSW +M+ G+ L +M G V+ +++T+ + V C
Sbjct: 334 FKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDES 393
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L K LH Y LK + L A + Y KCG++ A+ VF + S L SW A+I
Sbjct: 394 VLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIG 453
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
GY QS P +L K + P++ T+ S+LSA ++L +L +G+ VH IR LE
Sbjct: 454 GYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLER 513
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
D V +++ +Y C + + +F+ + +++WN++I+G N
Sbjct: 514 DLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMV 573
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P +++++V AC+ L ++++G HAY+ K LL N ++ ++++ YAK G
Sbjct: 574 LYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKH-LLEDNAFIACSIIDMYAKNGAI 632
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ VF+ ++EK+ +W+AMI GYGM G ++ LF +M P+++ F +L+AC
Sbjct: 633 TQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTAC 692
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H+G++ EG + M F P++KHY C++D+L RAG+L+ AL M EPDV +
Sbjct: 693 NHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGI 752
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ + L C ++ ++GE + K+ L P+K YVL+SNLYA G+W V QVR+ MK+
Sbjct: 753 WNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKE 812
Query: 663 RGLSKSPGCSLVDLDIANDFSF 684
L K GCS ++L+ FSF
Sbjct: 813 MSLRKDAGCSWIELN-GKVFSF 833
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 145/564 (25%), Positives = 272/564 (48%), Gaps = 45/564 (7%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKC 136
++D T++++MY G +RS FD++ + + + + +I Y N+LY +++E F K
Sbjct: 118 SDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKM 177
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD 195
+ K DNF F V+KAC + D+ G+ VH +VK G D FV LV Y
Sbjct: 178 ISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGF 237
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+ + ++FD ++N+VSW SMI + N +G + T+ +++
Sbjct: 238 VSDALKLFDIMPERNLVSWNSMIRVFSDNG------------DDGAFMPDVATVVTVLPV 285
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA+ R + GK +HG+ +K+ ++ + AL+DMY K G I D++ +F + ++VSW
Sbjct: 286 CAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSW 345
Query: 316 TAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
M+ G++ G L D + VTI + + L + +H
Sbjct: 346 NTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYS 405
Query: 374 IRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------L 422
++ + D + NA V YAKC ++ A+ +F K + +WN++I G L
Sbjct: 406 LKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSL 465
Query: 423 DDNVS-------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
D ++ PD T+ S++SAC+ L ++++G +H + + L +++V ++L+
Sbjct: 466 DAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSL 524
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
Y CG+ + +++FDAM + + V+W+ +I G+ G +L LF M+ +QP +
Sbjct: 525 YIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISM 584
Query: 536 TTILSACSHTGMVGEGWK----CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
T+ ACS + G + + D F+ ++D+ A+ G + ++ +
Sbjct: 585 MTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIA-----CSIIDMYAKNGAITQSSKVF 639
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSR 615
+ E + + A + G G++ R
Sbjct: 640 NGLK-EKSAASWNAMIMGYGMHGR 662
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/415 (28%), Positives = 203/415 (48%), Gaps = 36/415 (8%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
+L+A + +DI+ G K+H + D + T ++ MYA C SR FD K
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWL 268
N+ W ++I+ Y +N+ E L +F +M + + + T ++ ACA + + G +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
HG ++K G+ + + AL+ Y G + DA +FD + +LVSW +MI ++ +G
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG-D 268
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NAL 387
D A F P+ T+ +VL A+ + +G+ VH ++L L+ V+ NAL
Sbjct: 269 DGA-----------FMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNAL 317
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------------DDNVSP 428
+DMY+K I D++ IF+ + K+V++WN+++ G ++V
Sbjct: 318 MDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKA 377
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D VT+++ + C + LH YS KQ + + + A + YAKCG A+ V
Sbjct: 378 DEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDEL-LANAFVASYAKCGSLSYAQRV 436
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
F +R K +W+A+IGGY D SL M N + P+ ++LSACS
Sbjct: 437 FHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACS 491
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 76/179 (42%), Gaps = 7/179 (3%)
Query: 423 DDNVSPDAVTLVS-----VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
DD S D LV ++ A +++G +H + L S+ + T ++ YA
Sbjct: 72 DDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYA 131
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQPNEVIFT 536
CG +R FDA+R KN W+A+I Y L +F M+++ + P+ F
Sbjct: 132 MCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFP 191
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
++ AC+ VG G + + V + +V G + +AL+ + MP
Sbjct: 192 CVIKACAGISDVGIGL-AVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMP 249
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 338/641 (52%), Gaps = 34/641 (5%)
Query: 67 AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
A H L++ GL D LVS YG+ G V A +FD MP + S+ MIR + N
Sbjct: 563 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 622
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSK-------VLKACCELRDIDEGMKVHCEIVKVGGP 178
+ E + + + ++E+ + F VL C R+I G VH VK+
Sbjct: 623 FSE---ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 679
Query: 179 DSFVLT-GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
VL L+DMY+KC I +++ +F +KNVVSW +M+ G+ + +M
Sbjct: 680 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 739
Query: 238 REGF--VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
G V+ +++T+ + V C L K LH Y LK N + A + Y KCG
Sbjct: 740 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 799
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
++ A+ VF + S + SW A+I G+ QS P +L K + P+ T+ S+LS
Sbjct: 800 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 859
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A ++L +L +G+ VH IR LE D V +++ +Y C + + +F+ +K +++
Sbjct: 860 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 919
Query: 415 WNSIISGLDDNVSPD-----------------AVTLVSVISACASLGAVQVGSSLHAYST 457
WN++I+G N PD ++++ V AC+ L ++++G HAY+
Sbjct: 920 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 979
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K LL + ++ +L++ YAK G + VF+ ++EK+T +W+AMI GYG+ G ++
Sbjct: 980 KH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 1038
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
LF +M P+++ F +L+AC+H+G++ EG + M F P++KHY C++D+
Sbjct: 1039 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 1098
Query: 578 LARAGRLEEALEFM-ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
L RAG+L++AL + E M E DV ++ + L C ++ ++GE + K+ EL P+K
Sbjct: 1099 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 1158
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YVL+SNLYA G+W V +VR+ M + L K GCS ++L+
Sbjct: 1159 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 1199
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 248/492 (50%), Gaps = 27/492 (5%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKC 136
+D T++++MY G +R VFD++ + + + + +I Y N+LY +++E F +
Sbjct: 473 NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 532
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD 195
+ D+F + V+KAC + D+ G+ VH +VK G D FV LV Y
Sbjct: 533 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 592
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG----NQITLGS 251
+ + Q+FD ++N+VSW SMI + N ++E +L M E +G + TL +
Sbjct: 593 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 652
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
++ CA+ R + GK +HG+ +K+ ++ L AL+DMY KCG I +A+ +F + +
Sbjct: 653 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 712
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW M+ G++ G + D + VTI + + L + +
Sbjct: 713 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 772
Query: 370 HSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------- 421
H ++ + + V NA V YAKC ++ A+ +F K V +WN++I G
Sbjct: 773 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 832
Query: 422 ---LDDNVS-------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
LD ++ PD+ T+ S++SAC+ L ++++G +H + + L +++V +
Sbjct: 833 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLS 891
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
+L+ Y CG+ + + +FDAM +K+ V+W+ +I GY G +L +F M+ +Q
Sbjct: 892 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 951
Query: 532 EVIFTTILSACS 543
+ + ACS
Sbjct: 952 GISMMPVFGACS 963
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 211/427 (49%), Gaps = 44/427 (10%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+L+A + +DI+ G K+H ++V D + T ++ MYA C SR VFD
Sbjct: 445 LLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 503
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--------GNQITLGSLVTACAKLR 260
KN+ W ++I+ Y +N+ L++ + E F+E + T ++ ACA +
Sbjct: 504 KNLFQWNAVISSYSRNE-------LYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 556
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ G +HG ++K G+ + + AL+ Y G + DA +FD + +LVSW +MI
Sbjct: 557 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 616
Query: 321 GYTQSGYPDKALKLFTDKKWAD----FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++ +G+ +++ L + + F P+ T+ +VL A+ + +G+ VH ++L
Sbjct: 617 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 676
Query: 377 GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD------------ 423
L+ V+ NAL+DMY+KC I +A+ IF+ + K+V++WN+++ G
Sbjct: 677 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 736
Query: 424 -------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
++V D VT+++ + C + LH YS KQ + N V A + Y
Sbjct: 737 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV-YNELVANAFVASY 795
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG A+ VF +R K +W+A+IGG+ D SL M + P+
Sbjct: 796 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 855
Query: 537 TILSACS 543
++LSACS
Sbjct: 856 SLLSACS 862
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 423 DDNVSPDAVTLVS-----VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
DD S DA LV ++ A +++G +H + L ++ + T ++ YA
Sbjct: 427 DDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYA 486
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN-EEVQPNEVIFT 536
CG +R VFDA+R KN W+A+I Y L F +M++ ++ P+ +
Sbjct: 487 MCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYP 546
Query: 537 TILSACSHTGMVGEG 551
++ AC+ VG G
Sbjct: 547 CVIKACAGMSDVGIG 561
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 187/504 (37%), Positives = 297/504 (58%), Gaps = 30/504 (5%)
Query: 202 VFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+F++ D+ +V SW S+IA + + E L F+ MR+ ++ N+ T + +C+ L
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L+ GK H L G E + + +AL+DMY KCG + +AR +FDE+ ++V+WT++I
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPN---------HVTIASVLSASAQLGNLNMGRMVHS 371
GY Q+ +AL +F + + N V + SVLSA +++ N + VH
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216
Query: 372 LGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-VSPD 429
+ I++GL+ V N L+D YAKC ++ +R +F+ +EKDV++WNS+I+ N +S D
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276
Query: 430 A-----------------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
A VTL +++ ACA GA++VG LH K G ++ NV + T++
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVN-NVIMATSI 335
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
++ Y KCG A+ AR FD M+EKN +W+AMI GYGM G +L +F M+ V+PN
Sbjct: 336 IDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNY 395
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
+ F ++L+ACSH G + EGW+ F +M ++ P ++HY CMVDLL RAG ++EA ++
Sbjct: 396 ITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIK 455
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
+M + D L+G+ L C ++ +L E+ +++ +L P YYVL++N+YA GRW
Sbjct: 456 SMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKD 515
Query: 653 VNQVRELMKQRGLSKSPGCSLVDL 676
V ++R L+K RGL K PG SLV+L
Sbjct: 516 VERMRILVKDRGLVKPPGYSLVEL 539
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 230/470 (48%), Gaps = 52/470 (11%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
T NT L +++ + FD D YS+ +I + + + M
Sbjct: 26 TAAATNTNLTTLFNKY---------FD---RTDVYSWNSLIAELARGGDSCESLRAFSWM 73
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
RK + + F +K+C L D++ G + H + + G D FV + L+DMY+KC +
Sbjct: 74 RKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKL 133
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLG------ 250
++R +FDE +N+V+WTS+I GYVQND A E L++F EGN +G
Sbjct: 134 SNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSV 193
Query: 251 ---SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
S+++AC+++ + +HG +K+G++ + LLD Y KCG + +R VFD++
Sbjct: 194 AMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDM 253
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMG 366
D+VSW +MI Y Q+G A ++F K N VT++++L A A G L +G
Sbjct: 254 AEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVG 313
Query: 367 RMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+H I++G + + + +++DMY KC AR F+ EK+V +W ++I+G
Sbjct: 314 MCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMH 373
Query: 422 ------LD-------DNVSPDAVTLVSVISACASLGAVQVG-----SSLHAYSTKQGLLS 463
LD V P+ +T +SV++AC+ G ++ G + H Y+ + G+
Sbjct: 374 GFAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH 433
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+++ + G + A + +M+ ++ V W +++ + D
Sbjct: 434 YG-----CMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKD 478
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 195/588 (33%), Positives = 318/588 (54%), Gaps = 22/588 (3%)
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP D S+ ++ + +N ++ D M + + V+ AC ++ G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 166 MKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+ +H VKVG L LVDMY K D+ +S QVFD L++N VSW S I ++
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNA 120
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ L +F +M E V ITL SL+ A +L + G+ +HGY +K ++++ +
Sbjct: 121 GFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVA 180
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+L+DMY K G++ A ++F+++ ++VSW AMI Q+G +A +L TD + +
Sbjct: 181 NSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGEC 240
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
PN +T+ +VL A A++ +L MG+ +H+ IR GL D + NAL+DMY+KC ++ AR I
Sbjct: 241 PNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNI 300
Query: 404 FETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAV 446
FE SEKD +++N++I G + + DAV+ + +SAC +L
Sbjct: 301 FE-RSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVF 359
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ G +H ++ LLS + ++ +LL+ Y K G +A +F+ + +K+ +W+ MI G
Sbjct: 360 KHGKEIHCVLVRR-LLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILG 418
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
YGM G + LF M + + + V + +L+ACSH G+V +G K F M P
Sbjct: 419 YGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQ-NIEP 477
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
HY CMVDLL RAG+L + E + +MP + ++GA L C ++ +L + + +
Sbjct: 478 QQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHL 537
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
EL P+ + YY L+ N+YA GRW N++R+LMK R + K+P S V
Sbjct: 538 FELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWV 585
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 228/467 (48%), Gaps = 23/467 (4%)
Query: 67 AFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+ HAL + GL T LV MYG FG V+ + VFD M + S+ I +
Sbjct: 62 SIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAG 121
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC-EIVKVGGPDSFVLT 184
Y D++ ++ M + + S +L A EL D G +VH I + D FV
Sbjct: 122 FYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVAN 181
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LVDMYAK + + +F++ D+NVVSW +MIA VQN E L M++
Sbjct: 182 SLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECP 241
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N ITL +++ ACA++ +L GK +H + ++ G+ + + AL+DMY KCG + AR++F
Sbjct: 242 NSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIF 301
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
E D VS+ +I+GY+QS + ++L LF + + V+ LSA L
Sbjct: 302 -ERSEKDDVSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFK 360
Query: 365 MGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
G+ +H + +R L + + N+L+D+Y K ++ A IF ++KDV +WN++I G
Sbjct: 361 HGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYG 420
Query: 423 ----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
D + D V+ ++V++AC+ G V G + Q + +
Sbjct: 421 MHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQM 480
Query: 467 YVGTALLNFYAKCGD-AQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
+ +++ + G ++ A ++ D N+ W A++G + G+
Sbjct: 481 HY-ACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGN 526
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/520 (35%), Positives = 296/520 (56%), Gaps = 30/520 (5%)
Query: 183 LTGLVDMYAKCRDIGSSRQVF-DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
+T L++MY++C + + VF D ++NV ++ ++IAG+V N A +G + RMR
Sbjct: 13 ITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVG 72
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V ++ T +V AC + + + +HG + K+G+E+N + +AL++ Y+K DA
Sbjct: 73 VMPDKFTFPCVVRACCEFMEVRK---IHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAE 129
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF+EL D+V W AMI GYT+ G+ +KA+ +F + T S+LS +G
Sbjct: 130 KVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMG 189
Query: 362 NLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
++N GR +H + ++G V NAL+DMY KC DA IFE +EKD+ +WNSIIS
Sbjct: 190 DINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIIS 249
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
L V PD +T+ +V+ AC+ L A+ G +H Y GL
Sbjct: 250 AHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGK 309
Query: 464 S----NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
+ +V + A+++ YAKCG ++A ++FD MR K+ +W+ MI GY M G G +L +
Sbjct: 310 NENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDM 369
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M +++P+ V F +LSACSH G V +G M +F +P+++HY C++D+L
Sbjct: 370 FHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLG 429
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC---Y 636
RAG L EA + + +P+E ++ L+ A L C L+ +LG V+ +K+ +L P K C
Sbjct: 430 RAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEP-KHCGSGS 488
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+L+S+LY GR+ +VR MK++ + K+PGCS ++L
Sbjct: 489 YILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIEL 528
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 220/455 (48%), Gaps = 29/455 (6%)
Query: 84 TKLVSMYGSFGHVKYARSVF-DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T L++MY ++ A VF D + +++ +I + N L D +FYK MR
Sbjct: 14 TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGV 73
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
D F F V++ACCE ++ K+H + K+G + FV + LV+ Y K + +
Sbjct: 74 MPDKFTFPCVVRACCEFMEVR---KIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEK 130
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF+E +++VV W +MI GY + + +V+F RM E + ++ T S+++ +
Sbjct: 131 VFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGD 190
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
++ G+ +HG + K+G + AL+DMY KC + DA +F+ + DL SW ++I
Sbjct: 191 INNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISA 250
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--- 378
+ Q D L+LF + P+ +TI +VL A + L L GR +H I GL
Sbjct: 251 HEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKN 310
Query: 379 ---EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
+D + NA++DMYAKC + +A IF+ KDV +WN +I G
Sbjct: 311 ENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMF 370
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ + PD VT V V+SAC+ G V G S + + + T +++ +
Sbjct: 371 HRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGR 430
Query: 479 CGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
G A + + E N + W A++G + G+
Sbjct: 431 AGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGN 465
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 13/206 (6%)
Query: 47 LPSIPCLN-LLGLCKSTGSL---KAFHALLIVDGLTNDK------CNTKLVSMYGSFGHV 96
LP + + +L C +L + H +IV+GL ++ N ++ MY G +
Sbjct: 273 LPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCM 332
Query: 97 KYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC 156
K A +FD M N D S+ +MI Y ++ + ++ + M + + D F VL AC
Sbjct: 333 KNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSAC 392
Query: 157 CELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDET-LDKNVVS 213
+ +G + G P T ++DM + +G + + L+ N++
Sbjct: 393 SHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLIL 452
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMRE 239
W +++ + A+ G V+ ++ +
Sbjct: 453 WMALLGACRLHGNAELGNVVGEKITQ 478
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 214/691 (30%), Positives = 349/691 (50%), Gaps = 88/691 (12%)
Query: 59 CKSTGSLKAFHALLIVDG-LTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPD---FYS 113
CK+ K H I++G L N N T L+ Y S + A + + P Y
Sbjct: 34 CKTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHSSVYW 93
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ +IR + + ++ M+ D++ F V KAC E+ + + G +H ++
Sbjct: 94 WNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV---VSWTSMIAGYVQNDCAQE 229
++G + FV ++ MY KC+ + +R+VFDE + + V+W S+++ Y
Sbjct: 154 RLGFESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNV 213
Query: 230 GLVLFNRMREGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ LF M G+ + + + + +++ C L G+ +HG+ ++ G+ + + AL+
Sbjct: 214 AVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALV 273
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK--------- 339
DMY KCG + DA VF+ + D+V+W AM+ GY+Q+G + AL LF +
Sbjct: 274 DMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVV 333
Query: 340 -WA----------------DFF---------PNHVTIASVLSASAQLGNLNMGRMVHSLG 373
W+ D F PN VT+ S+LSA A +G L G+ H
Sbjct: 334 TWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYS 393
Query: 374 IRLGL--------EDYTVINALVDMYAKCHVIADARYIFET--TSEKDVIAWNSIISG-- 421
++ L +D VINAL+DMYAKC + AR +F+ ++DV+ W +I G
Sbjct: 394 VKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYA 453
Query: 422 -----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+D+ + P+ T+ V+ ACA L A++ G +HAY ++ + S
Sbjct: 454 QHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDS 513
Query: 465 NV-YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+V +V L++ Y+K GD +A++VFD+M ++N V+W++++ GYGM G + +F +M
Sbjct: 514 DVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEM 573
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
E + + + F +L ACSH+GM DF P ++HY CMVDLL RAGR
Sbjct: 574 RKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLLGRAGR 620
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L EA+ + +MPIEP ++ A L C ++S +L E KK+LEL D Y L+SN+
Sbjct: 621 LGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYTLLSNI 680
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
YA+ RW V ++ LMK+ G+ K PG S V
Sbjct: 681 YANARRWKDVARIGYLMKRTGIKKIPGWSWV 711
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 212/511 (41%), Gaps = 94/511 (18%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
LGLC + H + GL D LV MY G ++ A VF+ M D ++
Sbjct: 246 LGLCG-----RQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTW 300
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV---------------------- 152
M+ Y N ++D + + MR+ E D +S V
Sbjct: 301 NAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCG 360
Query: 153 -------------LKACCELRDIDEGMKVHCEIVKV--------GGPDSFVLTGLVDMYA 191
L AC + + G + HC VK D V+ L+DMYA
Sbjct: 361 CRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYA 420
Query: 192 KCRDIGSSRQVFDETL--DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR--EGFVEGNQI 247
KC+ + +R +FDE D++VV+WT MI GY Q+ A L LF+ M + + N
Sbjct: 421 KCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDF 480
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV---TALLDMYVKCGNIRDARSVF 304
T+ ++ ACA+L AL GK +H Y+L+ I+S ++ L+DMY K G++ A+ VF
Sbjct: 481 TISCVLMACARLAALKFGKQIHAYVLRRS-RIDSDVLFVANCLIDMYSKSGDVDTAQVVF 539
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + + VSWT+++ GY G + A ++F + + + +T VL A + G
Sbjct: 540 DSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSG--- 596
Query: 365 MGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
G+ G+E Y +VD+ + + +A + D
Sbjct: 597 -----MDFGVDPGVEHYA---CMVDLLGRAGRLGEAMRLIN-----------------DM 631
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ--GLLSSNVYVGTALLNFYAKCGDA 482
+ P V ++++SAC + L ++ K+ L + N T L N YA
Sbjct: 632 PIEPTPVVWIALLSAC----RIHSNEELAEFAAKKLLELKADNDGTYTLLSNIYANARRW 687
Query: 483 QSARMVFDAMRE---KNTVTWSAMIGGYGMQ 510
+ + M+ K WS + G GM+
Sbjct: 688 KDVARIGYLMKRTGIKKIPGWSWVKGRKGME 718
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 29/299 (9%)
Query: 356 ASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFE---TTSEK 410
+ Q L +++H I G L YT + L+ Y + I +A + E T S
Sbjct: 30 SKQQCKTLTQAKLLHQQYIINGHLLNSYTNVTNLIYTYISSNSITNAILLLEKNVTPSHS 89
Query: 411 DVIAWNSIIS-GLDDNV----------------SPDAVTLVSVISACASLGAVQVGSSLH 453
V WN +I L N +PD T V AC + ++G+S+H
Sbjct: 90 SVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIH 149
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK---NTVTWSAMIGGYGMQ 510
+ G SNV+V A+++ Y KC AR VFD + + ++VTW++++ Y
Sbjct: 150 GCVIRLG-FESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHC 208
Query: 511 GDGGGSLALFSDM-LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
+++LF +M + + P+ V IL C + G+ G + + C V +
Sbjct: 209 FVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGL-GLCGRQVHGFCVRSGLVEDVF 267
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+VD+ A+ G++E+A + E M + DV + A + G RF+ + KM E
Sbjct: 268 VGNALVDMYAKCGKMEDANKVFERMRFK-DVVTWNAMVTGYSQNGRFEDALSLFGKMRE 325
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 184/516 (35%), Positives = 288/516 (55%), Gaps = 20/516 (3%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-RE 239
+V T L++MY K + +R++FD +N SW++M+AGY C++E LF M E
Sbjct: 154 YVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE 213
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
E ++ ++++A + L G+ +HG I+K G+ + +L+ MY K G +
Sbjct: 214 CPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGA 273
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A VF+ + ++W+AMI GY Q+G D A+ +F+ A F P T VL+AS+
Sbjct: 274 AFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSD 333
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
LG L +G+ H L ++LG E V +ALVDMYAKC IADA+ F+ E D++ W ++
Sbjct: 334 LGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAM 393
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+SG N + P T+ S + ACA + A++ G LH K GL
Sbjct: 394 VSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVKYGL 453
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
VG+AL Y+KCG+ + VF + +++ + W+++I G+ G G G+L LF
Sbjct: 454 -GLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFE 512
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+M E P+ + F IL ACSH G+V GW+ F M +D+ P + HY CMVD+L+RA
Sbjct: 513 EMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRA 572
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G L+EA +F+E++ I+ L+ L C FD+G ++++EL + Y+L+S
Sbjct: 573 GMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTRDSSAYILLS 632
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
N+YAS +W V +VR LM+ RG++K PGCS V+L+
Sbjct: 633 NIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELN 668
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 235/461 (50%), Gaps = 23/461 (4%)
Query: 69 HALL--IVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HAL I ++N T L++MY G V AR +FD MP + +S+ M+ Y
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKC 199
Query: 127 YKDIVEFYKCMRKRL-KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLT 184
++ + ++ M + E FV + VL A + G ++H IVK G D V
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LV MYAK +G++ VF+ + ++N ++W++MI GY QN A + +F++M
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 319
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ T ++ A + L AL GK HG ++K+G E+ ++ +AL+DMY KCG I DA+ F
Sbjct: 320 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGF 379
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D+L +D+V WTAM+ G+ Q+G ++AL L+ P+ TIAS L A A + L
Sbjct: 380 DQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALE 439
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G+ +H+ ++ GL V +AL MY+KC + D +F ++DVIAWNSIISG
Sbjct: 440 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFS 499
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N PD +T ++++ AC+ +G V G + TK L+ +
Sbjct: 500 QNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRL 559
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+++ ++ G + A+ +++ + T W ++G
Sbjct: 560 DHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGA 600
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 366 GRMVHSLGIRLGLEDYT-VINALVDMYAKCH--VIADARYIFE--TTSEKDVIAWNSIIS 420
G +H+ ++ G + V N+L++ Y+ ++A A +F+ + +DV +WNS+++
Sbjct: 31 GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLN 90
Query: 421 GLDDNVSPDAVT-LVSVISACASLGAVQ----------------VGSSLHAYSTKQGLLS 463
L + DA++ S++S+ L + G++ HA + K
Sbjct: 91 PLSRHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAV 150
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
SNVYV T+LLN Y K G AR +FD M ++N+ +WS M+ GY + + LF M
Sbjct: 151 SNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM 210
Query: 524 LNE-EVQPNEVIFTTILSACS 543
L E + +E + T +LSA S
Sbjct: 211 LEECPSEKSEFVATAVLSAVS 231
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
Query: 66 KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H ++ GL + L +MY G+++ SVF +P+ D ++ +I + N
Sbjct: 442 KQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQN 501
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT 184
++ ++ M+ DN F +L AC + +D G + + K + LT
Sbjct: 502 GCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTK-----DYGLT 556
Query: 185 GLVDMYAKCRDIGSSRQVFDETLD 208
+D YA DI S + E D
Sbjct: 557 PRLDHYACMVDILSRAGMLKEAKD 580
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 193/502 (38%), Positives = 285/502 (56%), Gaps = 29/502 (5%)
Query: 203 FDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
F + +DK NV SW S+IA + + E L F+ +R+ + + + + +C+ L
Sbjct: 1098 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 1157
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G+ H G E + + +AL+DMY KCG ++DAR++FDE+ ++VSWT+MI G
Sbjct: 1158 LVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITG 1217
Query: 322 YTQSGYPDKALKLF-------TDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSLG 373
Y Q+ D AL LF T+ + + P + V + SVLSA +++ + VH
Sbjct: 1218 YVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFV 1277
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII-----SGLDDN-- 425
++ G + V N L+D YAKC ++ +F+ EKD I+WNS+I SGL
Sbjct: 1278 VKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEAL 1337
Query: 426 -----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
V +AVTL +V+ ACA GA++ G +H K L NV VGT++++
Sbjct: 1338 EVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDL-EYNVCVGTSIID 1396
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y KCG + A+ FD M+EKN +W+AM+ GYGM G +L +F M+ V+PN +
Sbjct: 1397 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYIT 1456
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
F ++L+ACSH G+V EGW F +M + P ++HY CMVDL RAG L EA ++ M
Sbjct: 1457 FVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRM 1516
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
++PD ++G+ L C ++ DLGE+ +K+ EL PD YYVL+SNLYA GRW V
Sbjct: 1517 KMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVE 1576
Query: 655 QVRELMKQRGLSKSPGCSLVDL 676
++R LMK R L K PG SLV+L
Sbjct: 1577 RMRMLMKNRQLVKPPGFSLVEL 1598
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/400 (32%), Positives = 199/400 (49%), Gaps = 44/400 (11%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNT-KLVSMYGSFGHVKYARSVFDSMPNPDF 111
L LL CK+ L+ HA +I GL+ND+ T KL+ +Y + G + YA +F + NP
Sbjct: 31 LFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
+++ ++IR +N L + + YK M + D F F V+KAC ID G VH
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS-------------- 216
++K G D FV L+D Y KC + +VF++ +NVVSWT+
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210
Query: 217 -----------------MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
MI GY++N +E L LF RM+ + N+ T+ SL+ AC ++
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L G+ +H Y +K IEI +L TAL+DMY KCG+I+DA VF+ + L +W +MI
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGI 374
G +AL LF++ + + P+ +T VL A + N+ G RM GI
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGI 390
Query: 375 RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
E Y + ++YA+ + + +A F++T E +A
Sbjct: 391 APIPEHY---ECMTELYARSNNLDEA---FKSTKEVGSLA 424
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/392 (30%), Positives = 199/392 (50%), Gaps = 39/392 (9%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F +K+C L D+ G H + G D FV + L+DMY+KC + +R +FDE
Sbjct: 1145 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 1204
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE---GNQITLGSLV-----TACAKL 259
+NVVSWTSMI GYVQN+ A L+LF E E GN + L S+V +AC+++
Sbjct: 1205 LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRV 1264
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ +HG+++K G + + + L+D Y KCG ++ VFD + D +SW +MI
Sbjct: 1265 SGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMI 1324
Query: 320 VGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
Y QSG +AL++F + N VT+++VL A A G L G+ +H I++ L
Sbjct: 1325 AVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDL 1384
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
E + V +++DMY KC + A+ F+ EK+V +W ++++G
Sbjct: 1385 EYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYK 1444
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVG-----SSLHAYSTKQGLLSSNVYVGTALLNF 475
+ V P+ +T VSV++AC+ G V+ G + H Y + G+ +++
Sbjct: 1445 MVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG-----CMVDL 1499
Query: 476 YAKCGDAQSARMVFDAMREK-NTVTWSAMIGG 506
+ + G A + M+ K + V W +++G
Sbjct: 1500 FGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 1531
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 183/387 (47%), Gaps = 53/387 (13%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ C + L Q +H I++ G+ + L L+ +Y G I A +F ++ +
Sbjct: 33 LLQNCKNFKHLRQ---IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+W +I T +G ++AL L+ + + T V+ A ++++G++VH
Sbjct: 90 TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149
Query: 372 LGIRLGLE-DYTVINALVDMYAKC-HV------------------------------IAD 399
I+ G D V N L+D Y KC H + +
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209
Query: 400 ARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACAS 442
AR IF+ K+V++W ++I+G +N+ P+ T+VS+I AC
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
+G + +G +H Y+ K + VY+GTAL++ Y+KCG + A VF+ M K+ TW++
Sbjct: 270 MGILTLGRGIHDYAIKN-CIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNS 328
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI G+ G G +L LFS+M V+P+ + F +L AC H V EG F M + +
Sbjct: 329 MITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY 388
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALE 589
P +HY CM +L AR+ L+EA +
Sbjct: 389 GIAPIPEHYECMTELYARSNNLDEAFK 415
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/370 (32%), Positives = 186/370 (50%), Gaps = 24/370 (6%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H V G D ++ L+ MY G +K AR++FD +P + S+ MI Y N+
Sbjct: 1165 HQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQA 1224
Query: 128 KDIVEFYKCMRKRLKE--------HDNFVFSKVLKACCEL--RDIDEGMKVHCEIVKVGG 177
+ + +K + E D+ V VL AC + + I EG VH +VK G
Sbjct: 1225 DNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG--VHGFVVKKGF 1282
Query: 178 PDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
S V L+D YAKC S++VFD +K+ +SW SMIA Y Q+ + E L +F+
Sbjct: 1283 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 1342
Query: 237 M-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
M R V N +TL +++ ACA AL GK +H ++K+ +E N + T+++DMY KCG
Sbjct: 1343 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 1402
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+ A+ FD + ++ SWTAM+ GY G +AL +F A PN++T SVL+
Sbjct: 1403 RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLA 1462
Query: 356 ASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEK 410
A + G + G M H I G+E Y +VD++ + + +A + + K
Sbjct: 1463 ACSHAGLVEEGWHWFNAMKHKYDIEPGIEHY---GCMVDLFGRAGCLNEAYNLIKRMKMK 1519
Query: 411 -DVIAWNSII 419
D + W S++
Sbjct: 1520 PDFVVWGSLL 1529
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 59/287 (20%)
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII- 419
N R +H+ IR GL D + L+ +Y+ IA A +F WN II
Sbjct: 39 NFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIR 98
Query: 420 ----SGLDDN------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
+GL + ++ D T VI AC + ++ +G +H K G S
Sbjct: 99 ANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF-S 157
Query: 464 SNVYVGTALLNFYAKCG-------------------------------DAQSARMVFDAM 492
+V+V L++FY KCG D Q AR +FD +
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
KN V+W+AMI GY +L LF M E + PNE +++ AC+ G++ G
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG- 276
Query: 553 KCFYSMCRDFKFVPSMKHYV----CMVDLLARAGRLEEALEFMENMP 595
D+ ++ V ++D+ ++ G +++A+E E MP
Sbjct: 277 ----RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 26/175 (14%)
Query: 400 ARYIFETTSEKDVIAWNSIISGL---DDNVS--------------PDAVTLVSVISACAS 442
A + ++ + +V +WNS+I+ L D+V P + I +C++
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L + G H + G ++++V +AL++ Y+KCG + AR +FD + +N V+W++
Sbjct: 1155 LCDLVSGRMSHQQAFVFG-FETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTS 1213
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEE--------VQPNEVIFTTILSACSHTGMVG 549
MI GY +L LF D L EE V + V+ ++LSACS G
Sbjct: 1214 MITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKG 1268
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 59 CKSTGSLKA---FHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C G+L+A H +I L + C T ++ MY G V+ A+ FD M + S+
Sbjct: 1363 CAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSW 1422
Query: 115 QVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M+ Y ++ K+ ++ FYK +R +K + F VL AC ++EG
Sbjct: 1423 TAMVAGYGMHGRAKEALDIFYKMVRAGVKP-NYITFVSVLAACSHAGLVEEG 1473
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 193/613 (31%), Positives = 315/613 (51%), Gaps = 20/613 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+++Y FG K A VF M D +F +I + + ++ + M+ D
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
+ +L AC + D+ +G ++H ++K G ++ G L+D+Y KC DI ++ +F+
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN 304
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
NVV W M+ Y Q + +F +M+ + NQ T ++ C +
Sbjct: 305 LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIEL 364
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +K G E + ++ L+DMY K G + AR + + L D+VSWT+MI GY Q
Sbjct: 365 GEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQ 424
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+ ++AL F + + +P+++ +AS SA A + + G +H+ G D ++
Sbjct: 425 HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI 484
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
N LV++YA+C +A +F KD I WN +ISG +
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGA 544
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ T +S ISA A+L ++ G +H + K G +S V AL++ Y KCG + A+
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGH-TSETEVANALISLYGKCGSIEDAK 603
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
M+F M +N V+W+ +I G G +L LF M E ++PN+V F +L+ACSH G
Sbjct: 604 MIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 663
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG F SM + P HY C+VD+L RAG+L+ A F++ MPI + ++
Sbjct: 664 LVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTL 723
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ ++GE+ K +LEL P + YVL+SN YA G+W +QVR++MK RG+
Sbjct: 724 LSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIR 783
Query: 667 KSPGCSLVDLDIA 679
K PG S +++ A
Sbjct: 784 KEPGRSWIEVKNA 796
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/599 (27%), Positives = 280/599 (46%), Gaps = 28/599 (4%)
Query: 42 ASFH-SLPSIPCLNLLGLCKSTGS----LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGH 95
AS H +L S L C+ G+ + HA +V GL D+ L+ +Y G
Sbjct: 34 ASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGL 93
Query: 96 VKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKA 155
V AR VF + + D S+ M+ Y + L K+ Y M +V S VL A
Sbjct: 94 VWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSA 153
Query: 156 CCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSW 214
C + + +G +H ++ K ++FV L+ +Y + +VF + L + V++
Sbjct: 154 CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTF 213
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
++I+G+ Q + L +F+ M+ + + +T+ SL+ ACA + L +GK LH Y+LK
Sbjct: 214 NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLK 273
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
G+ + +LLD+YVKCG+I A +F+ ++V W M+V Y Q K+ ++
Sbjct: 274 AGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEI 333
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
F + PN T +L G + +G +HSL I+ G E D V L+DMY+K
Sbjct: 334 FGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
+ AR I E ++DV++W S+I+G D V PD + L S
Sbjct: 394 YGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
SACA + A++ G +HA G ++++ + L+N YA+CG ++ A +F + K+
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVSG-YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKD 512
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
+TW+ +I G+G +L +F M + N F + +SA ++ + +G K +
Sbjct: 513 EITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQG-KQVH 571
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+ ++ L + G +E+A M + +VS + + C + R
Sbjct: 572 GRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGR 629
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 311/564 (55%), Gaps = 54/564 (9%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVD---MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H +++K G ++ + L+ L++ + + + VF+ + N++ W +M G+
Sbjct: 9 IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ L L+ M + N T L+ +CAK +A +G+ +HG++LK+G +++ ++
Sbjct: 69 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128
Query: 284 VTALLDMYVKCGNIRDARSVFDE-------------------------------LCSIDL 312
T+L+ MYV+ G + DA VFDE + D+
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW AMI GY ++G +AL+LF D + P+ T+ +V+SA AQ G++ +GR VHS
Sbjct: 189 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSW 248
Query: 373 GIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
G + ++NAL+D+Y+KC + A +FE KDVI+WN++I G
Sbjct: 249 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEA 308
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALL 473
L +P+ VT++S++ ACA LGA+ +G +H Y K+ +N + T+L+
Sbjct: 309 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLI 368
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ YAKCGD ++A VF+++ K+ +W+AMI G+ M G S +FS M ++P+++
Sbjct: 369 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDI 428
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +LSACSH+GM+ G F SM +D+K P ++HY CM+DLL +G +EA E +
Sbjct: 429 TFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINT 488
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M +EPD ++ + L C ++ +LGE + ++++ P+ YVL+SN+YA+ GRW V
Sbjct: 489 MEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEV 548
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
R L+ +G+ K PGCS +++D
Sbjct: 549 ANTRALLNDKGMKKVPGCSSIEID 572
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 161/583 (27%), Positives = 273/583 (46%), Gaps = 100/583 (17%)
Query: 64 SLKAFHALLIVDGLTN-DKCNTKLVS---MYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
SL+ HA +I GL N + +KL+ + F + YA SVF+++ P+ + M R
Sbjct: 5 SLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFR 64
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GP 178
+ L+ ++ Y CM +++ F +LK+C + + EG ++H ++K+G
Sbjct: 65 GHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDL 124
Query: 179 DSFVLTGLVDMYAKC---------------RDIGS----------------SRQVFDETL 207
D +V T L+ MY + RD+ S ++++FDE
Sbjct: 125 DLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIP 184
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
K+VVSW +MI+GY + +E L LF M + V ++ T+ ++V+ACA+ ++ G+
Sbjct: 185 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 244
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H +I G N +V AL+D+Y KCG + A +F+ L D++SW +I GYT
Sbjct: 245 VHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNL 304
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIRL-GLEDYTVI- 384
+AL LF + + PN VT+ S+L A A LG +++GR +H + RL G+ + + +
Sbjct: 305 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLR 364
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVS 427
+L+DMYAKC I A +F + K + +WN++I G + +
Sbjct: 365 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIE 424
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD +T V ++SAC+ G + +G R
Sbjct: 425 PDDITFVGLLSACSHSGMLDLG------------------------------------RH 448
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF---SDMLNE-EVQPNEVIFTTILSACS 543
+F +M + +T + YG D G LF +M+N E++P+ VI+ ++L AC
Sbjct: 449 IFRSMTQDYKMT--PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACK 506
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
G V G ++ + P YV + ++ A AGR E
Sbjct: 507 MHGNVELGESFAQNLIKIEPENPG--SYVLLSNIYATAGRWNE 547
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 337/633 (53%), Gaps = 42/633 (6%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L+ MY + VF +P + S+ +I N+L ++F+K M+K
Sbjct: 177 SALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 236
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
+++ VL++C L ++ G ++H +K D V T +DMYAKC ++ ++ +
Sbjct: 237 VSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQIL 296
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD++ + N S+ +MI GY Q + + L+LF+R+ + ++I+L + ACA ++ L
Sbjct: 297 FDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGL 356
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+G ++ +K + ++ + A +DMY KC + +A VFDE+ D VSW A+I +
Sbjct: 357 SEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAH 416
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
Q+G + L LF + P+ T SVL A G+L G +HS ++ G+ +
Sbjct: 417 EQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNS 475
Query: 383 VIN-ALVDMYAKCHVIADARYI----FETTS----------------EKDVIAWNSIISG 421
+ +L+DMY+KC +I +A I F+ T+ ++ ++WNSIISG
Sbjct: 476 SVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISG 535
Query: 422 -----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
++ ++PD T +V+ CA+L + +G +HA K+ L S
Sbjct: 536 YVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL-QS 594
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+VY+ + L++ Y+KCGD +R++F+ ++ VTW+AMI GY G G ++ LF M+
Sbjct: 595 DVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 654
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
E ++PN V F +IL AC+H G++ +G + FY M RD+ P + HY MVD+L ++G++
Sbjct: 655 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 714
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLY-SRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
+ ALE + MP E D ++ L C ++ + ++ E +L L P + Y L+SN+
Sbjct: 715 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 774
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YA G W +V+ +R M+ L K PGCS V+L
Sbjct: 775 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 807
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 184/654 (28%), Positives = 302/654 (46%), Gaps = 81/654 (12%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
K+++ Y ++ A F+ MP D S+ M+ Y N +E + M + E
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D F+ +LK C L D GM++H +V+VG D + L+DMYAK + S +V
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F +KN VSW+++IAG VQN+ L F M++ +Q S++ +CA L L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G LH + LK + + TA LDMY KC N++DA+ +FD+ +++ S+ AMI GY
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITGY 315
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
+Q + KAL LF + + ++++ V A A + L+ G ++ L I+ L D
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDV 375
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
V NA +DMY KC +A+A +F+ +D ++WN+II+ + N
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ PD T SV+ AC G++ G +H+ K G ++SN VG +L++ Y+KCG +
Sbjct: 436 RIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSG-MASNSSVGCSLIDMYSKCGMIEE 493
Query: 485 ARMV----------------FDAMREKN----TVTWSAMIGGYGMQGDGGGSLALFSDML 524
A + + M K V+W+++I GY M+ + LF+ M+
Sbjct: 494 AEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 553
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKC---------------------FYSMCRDFK 563
+ P++ + T+L C++ G G + YS C D
Sbjct: 554 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMYSKCGDLH 613
Query: 564 -----FVPSMKH----YVCMVDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCG 611
F S++ + M+ A G+ EEA++ E M +E P+ F + L C
Sbjct: 614 DSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACA 673
Query: 612 LYSRFDLGE---VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
D G M+K+ L P Y SN+ G+ +V + EL+++
Sbjct: 674 HMGLIDKGLEYFYMMKRDYGLDPQLPHY----SNMVDILGKSGKVKRALELIRE 723
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 216/480 (45%), Gaps = 70/480 (14%)
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CAK AL GK H +++ G + ++ LL +Y + A VFD + D+VSW
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 316 TAMIVGYT-------------------------------QSGYPDKALKLFTDKKWADFF 344
MI GY Q+G K++++F D A
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
+ T A +L + L + ++G +H + +R+G + D +AL+DMYAK ++ +
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 404 FETTSEKDVIAWNSIISG-LDDNVSPDAVTL----------------VSVISACASLGAV 446
F+ EK+ ++W++II+G + +N+ A+ SV+ +CA+L +
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++G LHA++ K + + V TA L+ YAKC + Q A+++FD N +++AMI G
Sbjct: 256 RLGGQLHAHALKSDFAADGI-VRTATLDMYAKCDNMQDAQILFDKSENLNRQSYNAMITG 314
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
Y + G +L LF +++ + +E+ + + AC+ + EG + + D
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-----DLAIKS 369
Query: 567 SMKHYVCM----VDLLARAGRLEEALEFMENMPIEPDVS---LFGAFLHGCGLYSRFDLG 619
S+ VC+ +D+ + L EA + M VS + A Y L
Sbjct: 370 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLF 429
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN-QVRELMKQRGLS--KSPGCSLVDL 676
M++ +E PD+ + S L A G + ++ + + G++ S GCSL+D+
Sbjct: 430 VSMLRSRIE--PDE---FTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 484
>gi|302796685|ref|XP_002980104.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
gi|300152331|gb|EFJ18974.1| hypothetical protein SELMODRAFT_111910 [Selaginella moellendorffii]
Length = 623
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 198/614 (32%), Positives = 323/614 (52%), Gaps = 26/614 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L G KS + H+ +I +GL D LV MYG G + AR+ F + +
Sbjct: 9 LKQYGNSKSLADGRRVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFRGIHQRNV 68
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
+S+ ++I N + +E K M E + F +L AC D+ G K+H E
Sbjct: 69 FSWTILISLLVQNGEASEGLELLKFMDLEGTEANKITFISLLGACSVTGDLSLGKKIH-E 127
Query: 172 IVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
V+ G ++ ++TG L++MY C + +R VF+ + ++VVSWT +I+ Y E
Sbjct: 128 RVRAKGLETDIITGNALLNMYTTCDSLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLE 187
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L L+ RM + F + +TL S++ ACA LR L +GK +H I+ G+E + + TA++
Sbjct: 188 ALQLYRRMEQEFSRPDAVTLISVLEACASLRTLVEGKTIHERIVASGVETDVFVGTAVVS 247
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
Y KC + DAR VFD + D+V W AMI Y Q+ +KA L+ + PN VT
Sbjct: 248 FYGKCEAVDDARQVFDRIMDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMRPNDVT 307
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIF--ET 406
+ ++L + + + G +H G L +V+NAL++MYAKC + +A +F T
Sbjct: 308 LITLLDSCSSTCKMERGSSLHREAAARGYLSHTSVVNALINMYAKCGSLENATRVFIEAT 367
Query: 407 TSEKDVIAWNS-IISGLDDNVSPDA----------------VTLVSVISACASLGAVQVG 449
+VI WN+ I++ ++++ +A VT +V++ CA+ G G
Sbjct: 368 NRTTNVITWNTMIVANAQEDLNLEALQIYHRMNQEGIKASDVTYGTVLAVCANFGDFTTG 427
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H+ S G S V +L+ Y CG+ ++A+ F+++ KN V+WS+++ Y
Sbjct: 428 REVHSRSLATGCCSD--VVQNSLICLYGGCGNLEAAQTAFESVASKNVVSWSSIVAAYAR 485
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G+ + LF M + V PN V FT++L ACSH G+ EGW F SM D P+ +
Sbjct: 486 NGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHHLEPTPE 545
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMV+LLA++GR+++A FM MP++PD S + + L C +++ + G + K++L+
Sbjct: 546 HYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAAKQLLDA 605
Query: 630 HPDKACYYVLVSNL 643
P + YVL+ N+
Sbjct: 606 EPRNSAAYVLLYNI 619
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 199/649 (30%), Positives = 340/649 (52%), Gaps = 43/649 (6%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H +++ G D + L+ MY + VF +P + S+ +I N+L
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++F+K M+K +++ VL++C L ++ G ++H +K D V T
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMYAKC ++ ++ +FD + + N S+ +MI GY Q + + L+LF+R+ + ++
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
I+L + ACA ++ L +G ++G +K + ++ + A +DMY KC + +A VFDE
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I + Q+G + L LF + P+ T S+L A G+L G
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYG 501
Query: 367 RMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYI----------------FETTSE 409
+HS ++ G+ + + +L+DMY+KC +I +A I E
Sbjct: 502 MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHN 561
Query: 410 KDV----IAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQV 448
K + ++WNSIISG ++ ++PD T +V+ CA+L + +
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +HA K+ L S+VY+ + L++ Y+KCGD +R++F+ ++ VTW+AMI GY
Sbjct: 622 GKQIHAQVIKKEL-QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 680
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G G ++ LF M+ E ++PN V F +IL AC+H G++ +G + FY M RD+ P +
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 740
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY-SRFDLGEVMIKKML 627
HY MVD+L ++G+++ ALE + MP E D ++ L C ++ + ++ E +L
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 800
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L P + Y L+SN+YA G W +V+ +R M+ L K PGCS V+L
Sbjct: 801 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 849
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 184/654 (28%), Positives = 301/654 (46%), Gaps = 81/654 (12%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
K+++ Y + A S F+ MP D S+ M+ Y N +E + M + E
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D F+ +LK C L D GM++H +V+VG D + L+DMYAK + S +V
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F +KN VSW+++IAG VQN+ L F M++ +Q S++ +CA L L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G LH + LK + + TA LDMY KC N++DA+ +FD +++ S+ AMI GY
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
+Q + KAL LF + + ++++ V A A + L+ G ++ L I+ L D
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
V NA +DMY KC +A+A +F+ +D ++WN+II+ + N
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ PD T S++ AC G++ G +H+ K G ++SN VG +L++ Y+KCG +
Sbjct: 478 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG-MASNSSVGCSLIDMYSKCGMIEE 535
Query: 485 ARMV----------------FDAMREKN----TVTWSAMIGGYGMQGDGGGSLALFSDML 524
A + + M K V+W+++I GY M+ + LF+ M+
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKC---------------------FYSMCRDFK 563
+ P++ + T+L C++ G G + YS C D
Sbjct: 596 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLH 655
Query: 564 -----FVPSMKH----YVCMVDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCG 611
F S++ + M+ A G+ EEA++ E M +E P+ F + L C
Sbjct: 656 DSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACA 715
Query: 612 LYSRFDLGE---VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
D G M+K+ L P Y SN+ G+ +V + EL+++
Sbjct: 716 HMGLIDKGLEYFYMMKRDYGLDPQLPHY----SNMVDILGKSGKVKRALELIRE 765
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 148/561 (26%), Positives = 256/561 (45%), Gaps = 78/561 (13%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
FS V K C + ++ G + H ++ G P +FVL L+ +Y RD S+ VFD+
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM------------------------------ 237
++VVSW MI GY +++ + FN M
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 238 --REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
REG +E + T ++ C+ L G +HG ++++G + + +ALLDMY K
Sbjct: 171 MGREG-IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
++ VF + + VSW+A+I G Q+ ALK F + + + + ASVL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 356 ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
+ A L L +G +H+ ++ D V A +DMYAKC + DA+ +F+ + + +
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 415 WNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
+N++I+G + + D ++L V ACA + + G ++ +
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K LS +V V A ++ Y KC A VFD MR ++ V+W+A+I + G G +L
Sbjct: 410 KSS-LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC-MVD 576
LF ML ++P+E F +IL AC+ G +G G + S+ + + S C ++D
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK--SGMASNSSVGCSLID 525
Query: 577 LLARAGRLEEA-------------------LEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
+ ++ G +EEA LE M N ++ + + + G + + +
Sbjct: 526 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 585
Query: 618 LGEVMIKKMLEL--HPDKACY 636
+++ +M+E+ PDK Y
Sbjct: 586 DAQMLFTRMMEMGITPDKFTY 606
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 40/270 (14%)
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
V++ R + E S + V +++ L+ S V CA GA+++G HA+
Sbjct: 14 VVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAH 73
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG------- 508
G + +V LL Y D SA MVFD M ++ V+W+ MI GY
Sbjct: 74 MIISGFRPT-TFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFK 132
Query: 509 ------------------------MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
G+ S+ +F DM E ++ + F IL CS
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 545 TGMVGEGWKCFYSMCR---DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
G + + R D V + ++D+ A+ R E+L + +P + VS
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAA----SALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
+ A + GC + L K+M +++
Sbjct: 249 -WSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 199/649 (30%), Positives = 340/649 (52%), Gaps = 43/649 (6%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H +++ G D + L+ MY + VF +P + S+ +I N+L
Sbjct: 161 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 220
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++F+K M+K +++ VL++C L ++ G ++H +K D V T
Sbjct: 221 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 280
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMYAKC ++ ++ +FD + + N S+ +MI GY Q + + L+LF+R+ + ++
Sbjct: 281 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 340
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
I+L + ACA ++ L +G ++G +K + ++ + A +DMY KC + +A VFDE
Sbjct: 341 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 400
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I + Q+G + L LF + P+ T S+L A G+L G
Sbjct: 401 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYG 459
Query: 367 RMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYI----------------FETTSE 409
+HS ++ G+ + + +L+DMY+KC +I +A I E
Sbjct: 460 MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHN 519
Query: 410 KDV----IAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQV 448
K + ++WNSIISG ++ ++PD T +V+ CA+L + +
Sbjct: 520 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 579
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +HA K+ L S+VY+ + L++ Y+KCGD +R++F+ ++ VTW+AMI GY
Sbjct: 580 GKQIHAQVIKKEL-QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 638
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G G ++ LF M+ E ++PN V F +IL AC+H G++ +G + FY M RD+ P +
Sbjct: 639 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 698
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY-SRFDLGEVMIKKML 627
HY MVD+L ++G+++ ALE + MP E D ++ L C ++ + ++ E +L
Sbjct: 699 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 758
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L P + Y L+SN+YA G W +V+ +R M+ L K PGCS V+L
Sbjct: 759 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 807
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 184/654 (28%), Positives = 301/654 (46%), Gaps = 81/654 (12%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
K+++ Y + A S F+ MP D S+ M+ Y N +E + M + E
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D F+ +LK C L D GM++H +V+VG D + L+DMYAK + S +V
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F +KN VSW+++IAG VQN+ L F M++ +Q S++ +CA L L
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G LH + LK + + TA LDMY KC N++DA+ +FD +++ S+ AMI GY
Sbjct: 256 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 315
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
+Q + KAL LF + + ++++ V A A + L+ G ++ L I+ L D
Sbjct: 316 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 375
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
V NA +DMY KC +A+A +F+ +D ++WN+II+ + N
Sbjct: 376 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 435
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ PD T S++ AC G++ G +H+ K G ++SN VG +L++ Y+KCG +
Sbjct: 436 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG-MASNSSVGCSLIDMYSKCGMIEE 493
Query: 485 ARMV----------------FDAMREKN----TVTWSAMIGGYGMQGDGGGSLALFSDML 524
A + + M K V+W+++I GY M+ + LF+ M+
Sbjct: 494 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 553
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKC---------------------FYSMCRDFK 563
+ P++ + T+L C++ G G + YS C D
Sbjct: 554 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLH 613
Query: 564 -----FVPSMKH----YVCMVDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCG 611
F S++ + M+ A G+ EEA++ E M +E P+ F + L C
Sbjct: 614 DSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACA 673
Query: 612 LYSRFDLGE---VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
D G M+K+ L P Y SN+ G+ +V + EL+++
Sbjct: 674 HMGLIDKGLEYFYMMKRDYGLDPQLPHY----SNMVDILGKSGKVKRALELIRE 723
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 216/480 (45%), Gaps = 70/480 (14%)
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CAK AL GK H +++ G + ++ LL +Y + A VFD++ D+VSW
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 316 TAMIVGYT-------------------------------QSGYPDKALKLFTDKKWADFF 344
MI GY+ Q+G K++++F D
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
+ T A +L + L + ++G +H + +R+G + D +AL+DMYAK ++ +
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 404 FETTSEKDVIAWNSIISG-LDDNVSPDAVTL----------------VSVISACASLGAV 446
F+ EK+ ++W++II+G + +N+ A+ SV+ +CA+L +
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 255
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++G LHA++ K + + V TA L+ YAKC + Q A+++FD N +++AMI G
Sbjct: 256 RLGGQLHAHALKSDFAADGI-VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 314
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
Y + G +L LF +++ + +E+ + + AC+ + EG + +
Sbjct: 315 YSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-----GLAIKS 369
Query: 567 SMKHYVCM----VDLLARAGRLEEALEFMENMPIEPDVS---LFGAFLHGCGLYSRFDLG 619
S+ VC+ +D+ + L EA + M VS + A Y L
Sbjct: 370 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLF 429
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN-QVRELMKQRGLS--KSPGCSLVDL 676
M++ +E PD+ + S L A G + ++ + + G++ S GCSL+D+
Sbjct: 430 VSMLRSRIE--PDE---FTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDM 484
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 208/647 (32%), Positives = 333/647 (51%), Gaps = 29/647 (4%)
Query: 68 FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
F AL+ G +N + L+ Y G + A VF+ M N D S+ +M+ +
Sbjct: 138 FQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGS 197
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TG 185
+ ++ Y M + + F F K+L A L ++ G VH ++ + VL T
Sbjct: 198 WSQALQLYHRMIQTGVAPNEFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKTA 256
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
LVDMY KC+ I + +V TL+ +V WT++I+G+ Q+ +E + F+ M V N
Sbjct: 257 LVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPN 316
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN-IRDARSVF 304
T ++ AC+ + AL GK +H ++ G+E + + +L+DMY+KC N I DA F
Sbjct: 317 NFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAF 376
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ S +++SWT++I G+++ G ++++K+F + PN T++++L A + +L
Sbjct: 377 RGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLT 436
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
R +H I+ + D V NALVD YA ++ DA ++ +DVI + S+ + ++
Sbjct: 437 QTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRIN 496
Query: 424 -----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
D+V D +L S +SA A + ++ G LH YS K GL S +
Sbjct: 497 QTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGL-GSWI 555
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
V L++ Y KCG A F + E + V+W+ +I G G +L+ F DM
Sbjct: 556 SVSNGLVDLYGKCGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLA 615
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
V+P+++ +L ACSH G+V G F SM P + HYVC+VDLL RAGRLEE
Sbjct: 616 GVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEE 675
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
A+ +E MP +PD ++ L C L+ LGE M ++ LEL P +YVL++NLY
Sbjct: 676 AMNVIETMPFKPDALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDD 735
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCS------LVDLDIANDFSFSRV 687
GR + R +M++RG+ K+PG S +V L A D S ++
Sbjct: 736 SGRSELGEKTRRMMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQI 782
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 177/649 (27%), Positives = 307/649 (47%), Gaps = 58/649 (8%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H+ +I G D + L+S+YG V AR +FD MP D S+ +++ Y
Sbjct: 37 IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TG 185
+++ +E + M + + F S L++C LR+ + G + + K G + VL +
Sbjct: 97 HEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSA 156
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+D Y+KC + +VF+ + ++VSWT M++ +V+ + L L++RM + V N
Sbjct: 157 LIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPN 216
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T L+ A + L L+ GK +H +++ IE+N L TAL+DMY KC +I DA V
Sbjct: 217 EFTFVKLLAASSFL-GLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSK 275
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
D+ WTA+I G+TQS +A+ F + + + PN+ T + +L+A + + L++
Sbjct: 276 LTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDL 335
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKC-HVIADARYIFETTSEKDVIAWNSIISGLD 423
G+ +HS + GLE D +V N+LVDMY KC ++I DA F + +VI+W S+I+G
Sbjct: 336 GKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFS 395
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
++ V P++ TL +++ AC ++ ++ LH Y K ++V
Sbjct: 396 EHGLEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNN-ADNDV 454
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
VG AL++ YA G A V M+ ++ +T++++ G+ +L + + M +
Sbjct: 455 VVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKD 514
Query: 527 EVQPNEVIFTTILSACSHTGMVGEG--------------W--------------KCFYSM 558
+V+ + + LSA + ++ G W C +
Sbjct: 515 DVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDA 574
Query: 559 CRDFKFV--PSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLY 613
R F + P + ++ LA G + AL E+M +EPD L+ C
Sbjct: 575 HRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHG 634
Query: 614 SRFDLGEVMIKKMLELHPDKAC--YYVLVSNLYASDGRWIRVNQVRELM 660
D+G + M E H + +YV + +L GR V E M
Sbjct: 635 GLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETM 683
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 129/406 (31%), Positives = 214/406 (52%), Gaps = 22/406 (5%)
Query: 157 CELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWT 215
C R + +G+ +H I+K+G D F+ L+ +Y KC + +RQ+FDE ++V SWT
Sbjct: 26 CNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWT 85
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
+++ Y + +E L LF+ M N+ TL + + +C+ LR + G + K
Sbjct: 86 MLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKS 145
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G + N L +AL+D Y KCG ++A VF+ + + D+VSWT M+ + ++G +AL+L+
Sbjct: 146 GFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLY 205
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
PN T +L+AS+ LG LN G++VH+ + +E + + ALVDMY KC
Sbjct: 206 HRMIQTGVAPNEFTFVKLLAASSFLG-LNYGKLVHAHLMMWRIELNLVLKTALVDMYCKC 264
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVI 437
I DA + + T E DV W +IISG + V P+ T ++
Sbjct: 265 QSIEDAVKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGIL 324
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA-QSARMVFDAMREKN 496
+AC+S+ A+ +G +H+ G L ++V VG +L++ Y KC + + A F + N
Sbjct: 325 NACSSILALDLGKQIHSRVVMAG-LENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPN 383
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
++W+++I G+ G S+ +F M V+PN +TIL AC
Sbjct: 384 VISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC 429
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 8/213 (3%)
Query: 415 WNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
W + +S + + + L ++S C S +V+ G +H+ K G ++++ LL+
Sbjct: 3 WRTTVSKIPSKI--EYSLLKDIVSFCNSR-SVRDGICIHSPIIKMGF-QEDMFLSNNLLS 58
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y KC AR +FD M ++ +W+ ++ YG G+ +L LF ML PNE
Sbjct: 59 LYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFT 118
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA---LEFM 591
+T L +CS G + F ++ F + ++D ++ G +EA E+M
Sbjct: 119 LSTALRSCSALREFNHGTR-FQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYM 177
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
N I + +F+ L MI+
Sbjct: 178 NNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQ 210
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 202/643 (31%), Positives = 335/643 (52%), Gaps = 33/643 (5%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL- 123
K HA ++V G D + L++MY G + AR VFD+ P D ++ ++ Y
Sbjct: 97 KCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAAS 156
Query: 124 ---ND-LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP- 178
ND ++ + ++ +R L + VLK C + VH +K+G
Sbjct: 157 VDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEW 216
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D FV LV++Y+KC + +R +FD +++VV W M+ GYVQ +E LF+
Sbjct: 217 DVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFH 276
Query: 239 EGFVEGNQITLGSLVTAC--AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+ ++ ++ ++ C A L GK +HG +K G++ + + +L++MY K G
Sbjct: 277 RSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGC 336
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
AR VF+++ +DL+SW +MI QS ++++ LF D P+H T+AS+ A
Sbjct: 337 AYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLA 396
Query: 357 SAQ-----LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
+A L L+ G+ +H+ I+ G + D V + ++DMY KC + +A +F S
Sbjct: 397 TAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAP 456
Query: 411 DVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLH 453
D +AW S+ISG DN V PD T ++I A + + A++ G LH
Sbjct: 457 DDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLH 516
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
A K +S + +VGT+L++ YAKCG+ + A +F M +N W+AM+ G G+
Sbjct: 517 ANVIKLDCVS-DPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNA 575
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
++ LF M + ++P+ V F ILSACSH G+ E ++ +SM D+ P ++HY C
Sbjct: 576 EEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSC 635
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
+VD L RAG ++EA + +E MP + S+ A L C + + G+ + ++ L P
Sbjct: 636 LVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFD 695
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ YVL+SN+YA+ RW V R++MK++ + K PG S +D+
Sbjct: 696 SAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDV 738
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 182/527 (34%), Positives = 290/527 (55%), Gaps = 52/527 (9%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF + N +SW +MI G+ + L L+ M + N T L +CAK +A
Sbjct: 34 VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD---------------- 305
+GK +H ILK G+ ++ H+ T+L+ MY + G + DA VFD
Sbjct: 94 AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153
Query: 306 ---------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
E+ D+VSW AMI GY + G +AL+LF + D P+ T+
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSE 409
A+VLS GN+ +GR +HS G + ++NAL+D+Y+KC + A +FE
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273
Query: 410 KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
KDVI+WN++I G L +P+ VT++S++ ACA LGA+ +G +
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWI 333
Query: 453 HAYSTKQ--GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
H Y K+ G+++ N + T+L++ YAKCG+ ++A VFD + K+ + +AMI G+ M
Sbjct: 334 HVYIDKKLKGIIT-NTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMH 392
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G + L S M + ++P+++ F +LSACSH G+ G K F SM D++ P ++H
Sbjct: 393 GRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEH 452
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CM+DLL R+G +EA E + +M +EPD ++G+ L C ++ +LGE++ +K++++
Sbjct: 453 YGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIE 512
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P YVL+SN+YA+ RW V +VR L+ +GL K PGCS +++D
Sbjct: 513 PKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEID 559
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/465 (27%), Positives = 222/465 (47%), Gaps = 53/465 (11%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
F + YA SVF S+ P+ S+ MIR + L+ + Y M +++ F +
Sbjct: 25 FHGLPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFL 84
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC---------------RDI 196
K+C + + EG ++H +I+K G D V T L+ MYA+ RD+
Sbjct: 85 FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144
Query: 197 GS----------------SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
S ++++FDE K+VVSW +MI+GY + +E L LFN M +
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V+ ++ T+ ++++ C + G+ +H +I G N LV AL+D+Y KCG + A
Sbjct: 205 DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERA 264
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F+ L D++SW +I GY + +AL +F + PN VT+ S+L A A L
Sbjct: 265 HGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHL 324
Query: 361 GNLNMGRMVH---SLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
G +++GR +H ++ + + ++ +L+DMYAKC I A +F+T K + + N+
Sbjct: 325 GAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNA 384
Query: 418 IISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+I G D + PD +T V ++SAC+ G +G + T
Sbjct: 385 MIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDY 444
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMI 504
+ + +++ + G + A + ++M E + V W +++
Sbjct: 445 RIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 177/347 (51%), Gaps = 12/347 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T +++ Y S G++ A+ +FD +P D S+ MI Y YK+ +E + M K +
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D + VL C +++ G ++H I G G + ++ L+D+Y+KC ++ + +
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ K+V+SW ++I GY + +E L++F M + N +T+ S++ ACA L A+
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327
Query: 263 HQGKWLHGYILK--IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
G+W+H YI K GI N+ L T+L+DMY KCGNI A VFD + + L S AMI
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIR 375
G+ G D A L + K P+ +T +LSA + G ++GR M I
Sbjct: 388 GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFET-TSEKDVIAWNSIISG 421
LE Y ++D+ + + +A + + T E D + W S++
Sbjct: 448 PKLEHY---GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKA 491
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 184/507 (36%), Positives = 288/507 (56%), Gaps = 32/507 (6%)
Query: 200 RQVFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
R +F + +DK +V SW S+IA + ++ + + L F+ MR+ + N+ T + +C+
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L L GK +H G + + +AL+DMY KCG + DAR +FDE+ ++VSWT+M
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 319 IVGYTQSGYPDKALKLFTDKKWAD-----------FFPNHVTIASVLSASAQLGNLNMGR 367
I GY Q+ +A+ LF + D + V + V+SA A++ ++
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 368 MVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN- 425
VH L ++ G E V N L+D YAKC I+ +R +F+ E DV +WNS+I+ N
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
V +AVTL +V+ ACA GA+Q+G +H K L N+ V
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMEL-EDNLVV 337
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
GT++++ Y KCG + AR FD ++ KN +W+ M+ GYGM G G ++ +F +M+ +
Sbjct: 338 GTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGI 397
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN + F ++L+ACSH G++ EGW F M +F P ++HY CMVDLL RAG L+EA
Sbjct: 398 KPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAY 457
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
++ M ++PD ++G+ L C ++ +LGE+ +K+ +L P YYVL+SN+YA G
Sbjct: 458 GLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAG 517
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVD 675
RW V ++R LMK GL K+PG S+V+
Sbjct: 518 RWDDVERMRILMKNHGLLKTPGYSIVE 544
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 240/487 (49%), Gaps = 73/487 (14%)
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
+ MRK + F +K+C L D+ G ++H + G G D FV + L+DMY+K
Sbjct: 74 FSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSK 133
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF-----------NRMREGF 241
C + +R++FDE ++NVVSWTSMI+GYVQN+ A+E + LF + +
Sbjct: 134 CGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVG 193
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V + + LG +++ACA++ + +HG +K G E + L+D Y KCG I +R
Sbjct: 194 VGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSR 253
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQL 360
VFD + D+ SW ++I Y Q+G +A LF+D K + N VT+++VL A A
Sbjct: 254 KVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHS 313
Query: 361 GNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
G L +G+ +H +++ LED V+ ++VDMY KC + AR F+ K+V +W ++
Sbjct: 314 GALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMV 373
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+G + + P+ +T VSV++AC+ G ++ G H ++
Sbjct: 374 AGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEG--WHWFNK----- 426
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
KC FD E +S M+ G G + L +
Sbjct: 427 --------------MKCE--------FDV--EPGIEHYSCMVDLLGRAGYLKEAYGLIQE 462
Query: 523 MLNEEVQPNEVIFTTILSACS-HTGM-VGEGWKCFYSMCRDFKFVPS-MKHYVCMVDLLA 579
M +V+P+ +++ ++L AC H + +GE S + FK PS +YV + ++ A
Sbjct: 463 M---KVKPDFIVWGSLLGACRIHKNVELGE-----ISARKLFKLDPSNCGYYVLLSNIYA 514
Query: 580 RAGRLEE 586
AGR ++
Sbjct: 515 DAGRWDD 521
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 201/417 (48%), Gaps = 31/417 (7%)
Query: 23 FFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK- 81
+++++ + + H TF ++ S C +L LC K H V G +D
Sbjct: 71 LYAFSSMRKLSLHPNRSTFPC--TIKS--CSSLYDLCAG----KQIHQQAFVFGYGSDIF 122
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIV----EF---- 133
+ L+ MY G++ AR +FD +P + S+ MI Y N+ ++ V EF
Sbjct: 123 VASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVD 182
Query: 134 ---YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDM 189
Y + D+ + V+ AC + VH VK G + L+D
Sbjct: 183 ETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDA 242
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQIT 248
YAKC +I SR+VFD + +V SW S+IA Y QN + E LF+ M + G V N +T
Sbjct: 243 YAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVT 302
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L +++ ACA AL GK +H ++K+ +E N + T+++DMY KCG + AR FD L
Sbjct: 303 LSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLK 362
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-- 366
++ SWT M+ GY G+ +A+K+F + PN++T SVL+A + G L G
Sbjct: 363 RKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWH 422
Query: 367 ---RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADAR-YIFETTSEKDVIAWNSII 419
+M + G+E Y+ +VD+ + + +A I E + D I W S++
Sbjct: 423 WFNKMKCEFDVEPGIEHYS---CMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLL 476
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 205/636 (32%), Positives = 336/636 (52%), Gaps = 29/636 (4%)
Query: 68 FHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
FH ++ G +D CNT L+++Y G AR +FD MP+ + ++ +I Y N
Sbjct: 22 FHLNVLKHGFDSDLFLCNT-LINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG 80
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE-LRDIDEGMKVHCEIVKVGGPDSFVL- 183
+ +D K M + F F ++AC E + +G +VH ++ G D+ V
Sbjct: 81 MPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAV 140
Query: 184 -TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
GL++MYAKC DI +R VF +DK+ VSW SMI G QN C ++ + +N MR+ +
Sbjct: 141 GNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTGL 200
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ L S +++CA L + G+ HG +K+G++++ + LL +Y + + + +
Sbjct: 201 MPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQK 260
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYP-DKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF + D VSW +I SG +A+++F + A + PN VT ++L+ + L
Sbjct: 261 VFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLS 320
Query: 362 NLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEK-DVIAWNSII 419
+ +H+L ++ ++D I NAL+ Y K + + IF SE+ D ++WNS+I
Sbjct: 321 TSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMI 380
Query: 420 SGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
SG N D T +V+SACA++ ++ G +HA + + L
Sbjct: 381 SGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIR-ACL 439
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S+V +G+AL++ Y+KCG A F+ M +N +W++MI GY G G +L LF+
Sbjct: 440 ESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALRLFTR 499
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M P+ + F +LSACSH G+V EG++ F SM + VP ++HY CMVDLL RAG
Sbjct: 500 MKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRAG 559
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGC--GLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
L++ F+ MPI+P++ ++ L C G + +LG + + + P A YVL+
Sbjct: 560 ELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLL 619
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
SN+YAS G+W + + R M++ + K GCS V +
Sbjct: 620 SNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTM 655
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/525 (33%), Positives = 309/525 (58%), Gaps = 24/525 (4%)
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
F++T +++ + + + QVF++T + + + +MI Y + + ++N+MR
Sbjct: 38 QFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRA 97
Query: 240 -GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ G++ T + ACA A+ +GK +HG I++IG E++ L ++LL+ Y+ CG I
Sbjct: 98 CQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIG 157
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSAS 357
+A+ VFDE + D+V W A+I GY + G + +F + + + PN T+ ++ A
Sbjct: 158 NAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVAC 217
Query: 358 AQLGNLNMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ NL +GR +H ++ + E + AL+++Y KC + AR +F+ EK+ + W
Sbjct: 218 IESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVW 277
Query: 416 NSIISG------LDD-----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
NS+I G L++ N+ PD T+ V+SACA +GA +G+ +H ++ K
Sbjct: 278 NSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMGAFNLGNWVHRFAEK 337
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
+G+ +V++GTAL++ YAKCG +AR VFD M E+N TW+A++ GY G ++
Sbjct: 338 KGIW--DVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILSGYASHGQAESAIE 395
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LFS+M +P+ + F +L AC+H+G+V G + F M + +K P ++HY CMVDLL
Sbjct: 396 LFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYYKIPPRVEHYGCMVDLL 455
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
RAG L+EA E ++ M +EP+V ++GA L C ++ ++GE M++L+ YV
Sbjct: 456 GRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGEWAAHHMIKLNAMDGGSYV 515
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL-DIANDF 682
+++NLYAS R+ RV VRE+M ++G+ KS GCS++++ D+ ++F
Sbjct: 516 ILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDVVHEF 560
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 246/483 (50%), Gaps = 23/483 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L L+ C + LK HA I+ L+ + TK+++ + S + YA VF+ PD
Sbjct: 10 LALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDG 69
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRK-RLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ + MIR Y + + Y MR + D + + V KAC +++G +VH
Sbjct: 70 FIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHG 129
Query: 171 EIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
IV++G D F+ + L++ Y C +IG+++QVFDE K+VV W ++I GY + +
Sbjct: 130 VIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLD 189
Query: 230 GLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK-IGIEINSHLVTAL 287
+F M E V N+ T+ L+ AC + + L G+ +HGY++K + + L AL
Sbjct: 190 SFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAAL 249
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+++YVKCG + AR +FDE+ + V W ++I GY Q G ++ ++L + ++ P+
Sbjct: 250 INLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDR 309
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETT 407
T++ VLSA AQ+G N+G VH + G+ D + AL+DMYAKC I AR +F+
Sbjct: 310 FTVSGVLSACAQMGAFNLGNWVHRFAEKKGIWDVFIGTALIDMYAKCGFIGAARKVFDQM 369
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
+E++V WN+I+SG + PD++T ++V+ ACA G V+ G
Sbjct: 370 NERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGK 429
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGM 509
+ + V +++ + G Q AR + M E N V W A++ +
Sbjct: 430 QYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSI 489
Query: 510 QGD 512
G+
Sbjct: 490 HGN 492
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 222/697 (31%), Positives = 358/697 (51%), Gaps = 39/697 (5%)
Query: 10 HVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHS--LPSIPCLN-LLGLCKSTGSL- 65
H T K QL FSY+ + T+ L+ + HS P L+ + +C GSL
Sbjct: 53 HRPTTLKEHNQL-LFSYSRDKQ-TKEALNLFVSLLHSSLQPDESTLSCVFNIC--AGSLD 108
Query: 66 ----KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW 120
+ H + GL + T LV MY +V R VFD M + S+ ++
Sbjct: 109 GKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAG 168
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
Y N LY + E + M+ + + S V+ A + G++VH +VK G ++
Sbjct: 169 YSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEA 228
Query: 181 F-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
V L+ +Y++ + +R VFD+ ++ V+W SMIAGYV+N E +FN+M+
Sbjct: 229 IPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQL 288
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
V+ +T S++ +CA LR L K + LK G + ++TAL+ KC + D
Sbjct: 289 AGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDD 348
Query: 300 ARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
A S+F + ++VSWTAMI G Q+G D+A+ LF+ + PNH T +++L+
Sbjct: 349 ALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHY 408
Query: 359 QLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ M H+ I+ E +V AL+D Y K DA +FE KD++AW++
Sbjct: 409 PVFVSEM----HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSA 464
Query: 418 IISG-----------------LDDNVSPDAVTLVSVISACAS-LGAVQVGSSLHAYSTKQ 459
+++G + + + P+ T SVI+ACAS A + G HAY+ K
Sbjct: 465 MLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKM 524
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L ++ + V +AL+ YAK G+ SA VF +E++ V+W++MI GY G +L +
Sbjct: 525 RL-NNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEV 583
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F +M + + V F +++AC+H G+V +G K F SM D P+MKHY CM+DL +
Sbjct: 584 FDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYS 643
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
RAG LE+A+ + MP P +++ L ++ +LGE+ +K++ L P+ + YVL
Sbjct: 644 RAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVL 703
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+SN+YA+ G W VR+LM +R + K PG S +++
Sbjct: 704 LSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEV 740
>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 748
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 208/687 (30%), Positives = 364/687 (52%), Gaps = 35/687 (5%)
Query: 22 RFFSYTNQQTPTQHELDQTFASFHSLPSIPCL-------NLLGLCKSTGSLK---AFHAL 71
++F+ + + Q ++F S+ + L +LL C S L + H
Sbjct: 12 KYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSFGLSIHQK 71
Query: 72 LIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDI 130
++V+G ++D + LV++Y FG + +AR VFD M + D + MI Y ++ +
Sbjct: 72 VLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSRAGIFGEA 131
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDM 189
K MR + + F ++L E+ + +H + G D V+ ++++
Sbjct: 132 CSLVKEMRFQGIKPSPVTFLEMLSGISEITQLQ---CLHAFALVYGFECDIAVMNSMLNL 188
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y KC +G ++++FD+ +++VSW +MI+G+ E L L RMR+ + +Q T
Sbjct: 189 YCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDDGLRPDQQTF 248
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
G+ ++ + L G+ LH I+ G + + HL TAL+ MY+KCG + V + +
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEASYRVLETIPD 308
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
D+V WT MI G + G +KAL +F++ + + IASV+++ AQLG+ ++G V
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--- 425
H +R G D +N+ + MYAKC + + +FE +E+D+++WN+IISG +
Sbjct: 369 HGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAIISGHAQHGDL 428
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
D++T+VS++ AC+S GA+ VG +H + + V T
Sbjct: 429 CKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRS-FIRPCTLVDT 487
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
AL++ Y+KCG ++A+ F+++ K+ V+W +I GYG G G +L ++S+ L+ ++P
Sbjct: 488 ALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGFHGKGDIALEIYSEFLHFGMKP 547
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
N VIF +LS+CSH GMV +G K F SM RDF P+ +H C+VDLL RA R+E+A +F
Sbjct: 548 NHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRVEDAFKF 607
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
+ P + + G L + ++ +++ + M+EL P A +YV + + +A+ RW
Sbjct: 608 YKENFTRPSIDVLGIILDASHANGKTEVEDIICRDMIELKPVDAGHYVRLGHSFAAMKRW 667
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDLD 677
V++ M+ GL K PG S ++++
Sbjct: 668 DDVSESWNQMRSLGLKKLPGWSKIEIN 694
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 347/664 (52%), Gaps = 36/664 (5%)
Query: 36 ELD-QTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSF 93
E+D F+S + + C L G + H I G +D T LV Y
Sbjct: 94 EMDCSIFSSVLKVSATLCDELFG--------RQLHCQCIKFGFLDDVSVGTSLVDTYMKG 145
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
+ K R+VFD M + ++ +I Y N L ++++ + M+ + ++F F+ L
Sbjct: 146 SNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAAL 205
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
E G++VH +VK G + V L+++Y KC ++ +R +FD+T K+VV
Sbjct: 206 GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 265
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+W SMI+GY N E L +F MR V ++ + S++ CA L+ L + LH +
Sbjct: 266 TWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSV 325
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-DLVSWTAMIVGYTQSGYPDKA 331
+K G + ++ TAL+ Y KC + DA +F E + ++VSWTAMI G+ Q+ ++A
Sbjct: 326 VKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEA 385
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDM 390
+ LF++ K PN T + +L+A + VH+ ++ E TV AL+D
Sbjct: 386 VGLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDA 441
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTL 433
Y K + +A +F KD++AW+++++G V P+ T
Sbjct: 442 YVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTF 501
Query: 434 VSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
S+++ CA+ A + G H ++ K L S++ V +ALL YAK G +SA VF
Sbjct: 502 SSILNVCAATTASMGQGKQFHGFAIKS-RLDSSLCVSSALLTMYAKKGHIESAEEVFKRQ 560
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
REK+ V+W++MI GY G +L +F +M +V+ + V F + +AC+H G+V EG
Sbjct: 561 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGE 620
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
K F M RD K P+ +H CMVDL +RAG+LE+A++ ++NMP +++ L C +
Sbjct: 621 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRV 680
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+ + +LG + +K++ + P+ + YVL+SN+YA G W +VR+LM +R + K PG S
Sbjct: 681 HKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 740
Query: 673 LVDL 676
+++
Sbjct: 741 WIEV 744
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/533 (29%), Positives = 264/533 (49%), Gaps = 28/533 (5%)
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
YA ++FD P+ D S+ ++ + + ++ + ++ E D +FS VLK
Sbjct: 49 YAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSA 108
Query: 158 ELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
L D G ++HC+ +K G D V T LVD Y K + R VFDE ++NVV+WT+
Sbjct: 109 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTT 168
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
+I+GY +N +E L LF RM++ + N T + + A+ +G +H ++K G
Sbjct: 169 LISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 228
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
++ + +L+++Y+KCGN+R AR +FD+ +V+W +MI GY +G +AL +F
Sbjct: 229 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 288
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ + + AS++ A L L +H ++ G D + AL+ Y+KC
Sbjct: 289 SMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348
Query: 396 VIADARYIF-ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVI 437
+ DA +F ET +V++W ++ISG N V P+ T ++
Sbjct: 349 AMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL 408
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
+A + S +HA K S+ VGTALL+ Y K G A VF + K+
Sbjct: 409 TALPVISP----SEVHAQVVKTNYERSST-VGTALLDAYVKLGKVDEAAKVFSGIDNKDI 463
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH-TGMVGEGWKCFY 556
V WSAM+ GY G+ ++ +FS++ V+PNE F++IL+ C+ T +G+G K F+
Sbjct: 464 VAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQG-KQFH 522
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+ S+ ++ + A+ G +E A E + E D+ + + + G
Sbjct: 523 GFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQR-EKDLVSWNSMISG 574
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 217/673 (32%), Positives = 342/673 (50%), Gaps = 66/673 (9%)
Query: 27 TNQQTPTQHELDQTFAS-FHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTK 85
T Q H + ++ S FHS + L+ G L F +L D T NT
Sbjct: 98 TGVQQVVMHNIADSYQSIFHSNQLLNGLSKSGQIDDAREL--FDKMLQRDEYT---WNT- 151
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+VS Y + G + AR +F+ + ++ +I Y + + +K MR ++
Sbjct: 152 MVSGYANVGRLVEARELFNGFSSRSSITWSSLISGYCRFGRQAEAFDLFKRMRLEGQKPS 211
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +L+ C L I +G +H +VK G + +V+ GLVDMYAKCR I + +F
Sbjct: 212 QYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILFK 271
Query: 205 E-TLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
+K N V WT+M+ GY QN + + F M VE NQ T S++TAC+ + A
Sbjct: 272 GLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAH 331
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +HG I++ G N+++ +AL+DMY KCG++ A+ V + + D+VSW +MIVG
Sbjct: 332 CFGEQVHGCIVRNGFGCNAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGC 391
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
+ G+ ++A+ LF + +H T SVL+ +G ++ G+ VH L I+ G E+Y
Sbjct: 392 VRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCCI-VGRID-GKSVHCLVIKTGFENYK 449
Query: 383 VI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
++ NALVDMYAK + A +FE EKDVI+W S+++G N
Sbjct: 450 LVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRIS 509
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
VSPD + S++SACA L ++ G +H+ K GL SS + V +L+ YAKCG
Sbjct: 510 GVSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSS-LSVNNSLVTMYAKCGCLDD 568
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A +F +M ++ +TW+A+I GY G G SL
Sbjct: 569 ADAIFVSMHVRDVITWTALIVGYARNGKGRDSL--------------------------- 601
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
K F M + + P +HY CM+DL R G+L+EA E + M ++PD +++
Sbjct: 602 --------KYFQQMKKIYGIEPGPEHYACMIDLFGRLGKLDEAKEILNQMDVKPDATVWK 653
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
A L C ++ +LGE + EL P A YV++SN+Y + +W ++R LMK +G
Sbjct: 654 ALLAACRVHGNLELGERAATNLFELEPMNAMPYVMLSNMYLAARKWDDAAKIRRLMKSKG 713
Query: 665 LSKSPGCSLVDLD 677
++K PGCS ++++
Sbjct: 714 ITKEPGCSWIEMN 726
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 297/551 (53%), Gaps = 28/551 (5%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKN 210
+L+ C D+G +VHC ++K G + + + L+DMY KCR+ + +VFD ++N
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
VVSW+++++G+V N + L LF+ M + N+ T + + AC L AL +G +HG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+ LKIG E+ + +L+DMY KCG I +A VF + L+SW AMI G+ +GY K
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 331 ALKLFTDKKWADF--FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE---DYTVIN 385
AL F + A+ P+ T+ S+L A + G + G+ +H +R G T+
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-----------------NVSP 428
+LVD+Y KC + AR F+ EK +I+W+S+I G N
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTK--QGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D+ L S+I A ++ G + A + K GL +S V ++++ Y KCG A
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS---VLNSVVDMYLKCGLVDEAE 368
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F M+ K+ ++W+ +I GYG G G S+ +F +ML ++P+EV + +LSACSH+G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
M+ EG + F + P ++HY C+VDLL RAGRL+EA ++ MPI+P+V ++
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ +LG+ + K +L + YV++SNLY G W REL +GL
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548
Query: 667 KSPGCSLVDLD 677
K G S V+++
Sbjct: 549 KEAGMSWVEIE 559
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 234/453 (51%), Gaps = 28/453 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY A VFDSMP + S+ ++ + LN K + + M ++ +
Sbjct: 47 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 106
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVF 203
F FS LKAC L +++G+++H +K+ G + V G LVDMY+KC I + +VF
Sbjct: 107 EFTFSTNLKACGLLNALEKGLQIHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVF 165
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--GNQITLGSLVTACAKLRA 261
+D++++SW +MIAG+V + L F M+E ++ ++ TL SL+ AC+
Sbjct: 166 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 225
Query: 262 LHQGKWLHGYILKIGIEINSH--LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
++ GK +HG++++ G S + +L+D+YVKCG + AR FD++ ++SW+++I
Sbjct: 226 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLI 285
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL--G 377
+GY Q G +A+ LF + + + ++S++ A L G+ + +L ++L G
Sbjct: 286 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 345
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
LE +V+N++VDMY KC ++ +A F KDVI+W +I+G
Sbjct: 346 LET-SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYE 404
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L N+ PD V ++V+SAC+ G ++ G L + + + V +++ + G
Sbjct: 405 MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAG 464
Query: 481 DAQSARMVFDAMREK-NTVTWSAMIGGYGMQGD 512
+ A+ + D M K N W ++ + GD
Sbjct: 465 RLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 205/427 (48%), Gaps = 31/427 (7%)
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+ + L S++ C + QG +H Y+LK G +N L+DMY KC A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
VFD + ++VSW+A++ G+ +G +L LF++ +PN T ++ L A L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 361 GNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
L G +H +++G E + N+LVDMY+KC I +A +F ++ +I+WN++I
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 420 SGL-----------------DDNVS--PDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+G + N+ PD TL S++ AC+S G + G +H + + G
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 461 L-LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
S+ + +L++ Y KCG SAR FD ++EK ++WS++I GY +G+ ++ L
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F + Q + ++I+ + ++ +G K ++ +VD+
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL-----HPDKA 634
+ G ++EA + M ++ DV + + G Y + LG+ ++ E+ PD+
Sbjct: 360 KCGLVDEAEKCFAEMQLK-DVISWTVVITG---YGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 635 CYYVLVS 641
CY ++S
Sbjct: 416 CYLAVLS 422
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/645 (30%), Positives = 330/645 (51%), Gaps = 27/645 (4%)
Query: 58 LCKSTGSLK------AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L K+ G L+ HA+ + GL D + + LV MYG ++ A F M +
Sbjct: 142 LLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERN 201
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ I N+ Y +E + M++ ++ V ++C + + ++H
Sbjct: 202 SVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHA 261
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+K D V T +VD+YAK + +R+ F + V + +M+ G V+ E
Sbjct: 262 HAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAE 321
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L LF M + + ++L + +ACA+++ QG +H +K G +++ + A+LD
Sbjct: 322 ALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILD 381
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+Y KC + +A VF E+ D VSW A+I Q+ + + + P+ T
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFT 441
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
SVL A A L +L G +VH I+ GL D V + +VDMY KC +I +A+ + +
Sbjct: 442 YGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIG 501
Query: 409 EKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSS 451
+++++WNSIISG LD V PD T +V+ CA+L +++G
Sbjct: 502 GQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQ 561
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+H KQ +L Y+ + L++ YAKCG+ + ++F+ ++ + V+W+AMI GY + G
Sbjct: 562 IHGQIIKQEMLGDE-YISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHG 620
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G +L +F M V PN F +L ACSH G++ +G + FY M +K P ++H+
Sbjct: 621 QGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHF 680
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CMVD+L R+ +EAL+F+ +MP+E D ++ L C + ++ E +L L P
Sbjct: 681 ACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDP 740
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
D + Y+L+SN+YA G+W+ V++ R LM+Q L K PGCS +++
Sbjct: 741 DDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEV 785
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/585 (27%), Positives = 289/585 (49%), Gaps = 38/585 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++ Y G A S+F +MP+PD S+ ++ Y +++D V M +R D
Sbjct: 76 MLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPD 135
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +LKAC L D+ G+++H VK G D + LVDMY KCR + + + F
Sbjct: 136 RTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFH 195
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++N VSW + IAG VQN+ GL LF +M+ + +Q S+ +CA + L
Sbjct: 196 GMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLST 255
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ LH + +K + + TA++D+Y K ++ DAR F L + + + AM+VG +
Sbjct: 256 ARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVR 315
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +AL+LF + + V+++ V SA A++ G VH L I+ G + D V
Sbjct: 316 TGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCV 375
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
NA++D+Y KC + +A +F+ ++D ++WN+II+ L+ N +
Sbjct: 376 RNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGM 435
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T SV+ ACA L +++ GS +H + K G L + +V + +++ Y KCG A+
Sbjct: 436 EPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSG-LGLDAFVSSTVVDMYCKCGMITEAQ 494
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+ D + + V+W+++I G+ + + FS+ML+ V+P+ + T+L C++
Sbjct: 495 KLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLA 554
Query: 547 MVGEGWKCFYSMCRDF----KFVPSMKHYVCMVDLLARAGRLEEALEFMENMP----IEP 598
+ G + + + +++ S +VD+ A+ G + ++L E +
Sbjct: 555 TIELGKQIHGQIIKQEMLGDEYISST-----LVDMYAKCGNMPDSLLMFEKAQKLDFVSW 609
Query: 599 DVSLFGAFLHGCG-----LYSRFDLGEVMIKKMLELHPDKACYYV 638
+ + G LHG G ++ R V+ + +AC +V
Sbjct: 610 NAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHV 654
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 229/529 (43%), Gaps = 65/529 (12%)
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM------ 217
G H ++ G P +FV L+ MYA+C +R VFD ++ VSW +M
Sbjct: 23 GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAH 82
Query: 218 -------------------------IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
++GY Q ++ + L M V ++ TL L
Sbjct: 83 AGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVL 142
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
+ AC L L G +H +K G+E++ +AL+DMY KC ++ DA F + +
Sbjct: 143 LKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNS 202
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW A I G Q+ + L+LF + + ASV + A + L+ R +H+
Sbjct: 203 VSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAH 262
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
I+ D V A+VD+YAK + DAR F + V A N+++ GL
Sbjct: 263 AIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEA 322
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+ D V+L V SACA + G +H + K G +V V A+L+
Sbjct: 323 LQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSG-FDVDVCVRNAILD 381
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y KC A +VF M ++++V+W+A+I ++A ++ML ++P++
Sbjct: 382 LYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFT 441
Query: 535 FTTILSACS-----HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
+ ++L AC+ G V G + D FV S +VD+ + G + EA +
Sbjct: 442 YGSVLKACAGLQSLEYGSVVHGKAIKSGLGLD-AFVSST-----VVDMYCKCGMITEAQK 495
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL--HPDKACY 636
+ + + VS + + + G L + + + +ML++ PD Y
Sbjct: 496 LHDRIGGQELVS-WNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTY 543
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 139/339 (41%), Gaps = 50/339 (14%)
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
A A AL G+ H +L G + + LL MY +CG AR VFD + D VS
Sbjct: 13 AGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVS 72
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFF------------------------------ 344
W M+ Y +G A LF D
Sbjct: 73 WNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGV 132
Query: 345 -PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P+ T+A +L A L +L +G +H++ ++ GLE D +ALVDMY KC + DA
Sbjct: 133 APDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALR 192
Query: 403 IFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGA 445
F E++ ++W + I+G N + SV +CA++
Sbjct: 193 FFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITC 252
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+ LHA++ K S++ VGTA+++ YAK AR F ++ +AM+
Sbjct: 253 LSTARQLHAHAIKNK-FSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMV 311
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
G G G +L LF M + + V + + SAC+
Sbjct: 312 GLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAE 350
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 116/291 (39%), Gaps = 51/291 (17%)
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEK-- 410
L A A L G+ H+ + G T + N L+ MYA+C A AR +F+ +
Sbjct: 11 LCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDT 70
Query: 411 -----------------------------DVIAWNSIISGL-----------------DD 424
DV++WN+++SG
Sbjct: 71 VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARR 130
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V+PD TL ++ AC L + +G +HA + K G L +V G+AL++ Y KC +
Sbjct: 131 GVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTG-LEMDVRAGSALVDMYGKCRSLED 189
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A F M E+N+V+W A I G L LF M + ++ + ++ +C+
Sbjct: 190 ALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAA 249
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+ + ++ KF +VD+ A+A L +A ++P
Sbjct: 250 ITCLSTARQLHAHAIKN-KFSADRVVGTAIVDVYAKADSLVDARRAFFSLP 299
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 89/223 (39%), Gaps = 36/223 (16%)
Query: 440 CASLG--AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
CA G A+ G + HA G + + +V LL YA+CG A AR VFD M ++T
Sbjct: 12 CAGAGRSALATGQAAHARMLVSGFMPTT-FVSNCLLQMYARCGGAAHARGVFDVMPHRDT 70
Query: 498 VTWSAMIGGYGMQGDGGGSLALFS-------------------------------DMLNE 526
V+W+ M+ Y GD G + +LF +M
Sbjct: 71 VSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARR 130
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
V P+ +L AC + G + +++ ++ +VD+ + LE+
Sbjct: 131 GVAPDRTTLAVLLKACGGLEDLALGVQ-IHAVAVKTGLEMDVRAGSALVDMYGKCRSLED 189
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
AL F M VS +GA + GC ++ G + +M L
Sbjct: 190 ALRFFHGMGERNSVS-WGAAIAGCVQNEQYTRGLELFVQMQRL 231
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 298/533 (55%), Gaps = 60/533 (11%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF+ + N++ W +M+ G+ + L ++ RM N + L+ +CAK +A
Sbjct: 20 VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMY---------------------VKC------ 294
+G+ +H +LK+G ++ ++ T+L+ MY V C
Sbjct: 80 FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139
Query: 295 ----GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
G+ R AR VFDE+ D+VSW AMI GY ++G ++AL+LF + + P+ T+
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199
Query: 351 ASVLSASAQLGNLNMGRMVHSL--------GIRLGLEDYTVINALVDMYAKCHVIADARY 402
SV+SA AQ G++ +GR VHS G L+ ++NAL+D+Y+KC + A
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLK---IVNALIDLYSKCGDVETAFG 256
Query: 403 IFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
+FE S KDV++WN++I G L P+ VTL+SV+ ACA LGA
Sbjct: 257 LFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGA 316
Query: 446 VQVGSSLHAYSTKQ-GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+ +G +H Y K+ +++ + T+L++ YAKCGD ++A VF++M ++ +W+AMI
Sbjct: 317 IDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMI 376
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G+ M G + LFS M V+P+++ F +LSACSH+G++ G + F SM +D+
Sbjct: 377 FGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNL 436
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
P ++HY CM+DLL +G +EA E + MP+EPD ++ + L C + +L E +
Sbjct: 437 TPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQ 496
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
K++++ P+ + YVL+SN+YA+ GRW V +VR ++ +G+ K PGCS +++D
Sbjct: 497 KLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVD 549
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 230/477 (48%), Gaps = 57/477 (11%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
F + YA SVF+++ P+ + M+R + + +E Y M +++ F +
Sbjct: 11 FDGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFL 70
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
LK+C + + +EG ++H +++K+G G D +V T L+ MYA+ + +R+VFD + ++V
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 212 VSWTS-------------------------------MIAGYVQNDCAQEGLVLFNRMREG 240
VS T+ MI GYV+N +E L LF M
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI----GIEINSHLVTALLDMYVKCGN 296
V ++ TL S+V+ACA+ ++ G+ +H ++ G + +V AL+D+Y KCG+
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ A +F+ L D+VSW +I GYT + +AL LF + + PN VT+ SVL A
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPA 310
Query: 357 SAQLGNLNMGRMVH---SLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
A LG +++GR +H ++ + ++ +L+DMYAKC I A +F + + +
Sbjct: 311 CAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLS 370
Query: 414 AWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
+WN++I G + V PD +T V ++SAC+ G + +G +
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSM 430
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
T+ L+ + +++ G + A + M E + V W +++ G+
Sbjct: 431 TQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGN 487
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 190/409 (46%), Gaps = 34/409 (8%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L++ Y S G + AR VFD + D S+ MI Y N Y++ +E +K M +
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-----VLTGLVDMYAKCRDIGS 198
D V+ AC + I+ G +VH + F ++ L+D+Y+KC D+ +
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+ +F+ K+VVSW ++I GY + +E L+LF M N +TL S++ ACA
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313
Query: 259 LRALHQGKWLHGYILK--IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
L A+ G+W+H YI K G+ + L T+L+DMY KCG+I A VF+ + L SW
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHS 371
AMI G+ G + A LF+ + P+ +T +LSA + G L++GR M
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQD 433
Query: 372 LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAV 431
+ LE Y ++D+ + +A + T + PD V
Sbjct: 434 YNLTPKLEHY---GCMIDLLGHSGLFKEAEEMIHTMP-----------------MEPDGV 473
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
S++ AC G +++ S K +S YV L N YA G
Sbjct: 474 IWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYV--LLSNIYATAG 520
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/632 (28%), Positives = 332/632 (52%), Gaps = 24/632 (3%)
Query: 66 KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HA + GL N + L+++Y G + A+ VFD + + ++ + N
Sbjct: 344 RQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQN 403
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+L ++ ++ ++ MR+ E D+F F VL AC L +D G +VHC +K G D FV
Sbjct: 404 ELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVA 463
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
++DMY+K I ++ +F K+ VSW ++I G N+ E + + RM+ +
Sbjct: 464 NAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIA 523
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
++++ + + AC+ + A+ GK +H +K + N + ++L+D+Y K G++ +R V
Sbjct: 524 LDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKV 583
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
+ + +V A+I G Q+ D+A++LF F P++ T S+LS + +
Sbjct: 584 LAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSS 643
Query: 364 NMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSE-KDVIAWNSIIS 420
+G+ VH ++ + +D ++ +LV +Y KC ++ DA + E + K+++ W + IS
Sbjct: 644 VIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATIS 703
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G N V D T SV+ AC+ + A+ G +H K G +S
Sbjct: 704 GYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVS 763
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALFSD 522
+AL++ Y+KCGD S+ +F ++ + N + W++MI G+ G +L LF
Sbjct: 764 YETAT-SALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQK 822
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M +++P++V +L ACSH G++ EG F SM + + VP + HY C++DLL R G
Sbjct: 823 MQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGG 882
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
L++A E ++ +P D ++ +L C ++ + G+V KK++E+ P + YV +S+
Sbjct: 883 HLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSS 942
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
L+A+ G W+ RE M+++G+ K PGCS +
Sbjct: 943 LHAAAGNWVEAKVAREAMREKGVMKFPGCSWI 974
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 278/569 (48%), Gaps = 23/569 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S S G + AR++ + ++ +I Y + L ++ YK M+K+
Sbjct: 264 IISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPT 323
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F+ +L A + DEG ++H VK G + FV + L+++Y K I +++VFD
Sbjct: 324 RSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFD 383
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +KN+V W +++ G+VQN+ +E + +F MR +E + T S++ AC L +L
Sbjct: 384 FSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDL 443
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +K G++ + + A+LDMY K G I A+++F + D VSW A+IVG
Sbjct: 444 GRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAH 503
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTV 383
+ +A+ + K+ + V+ A+ ++A + + + G+ +HS I+ + ++ V
Sbjct: 504 NEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAV 563
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
++L+D+Y+K + +R + ++ N++I+G L D
Sbjct: 564 GSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGF 623
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
P T S++S C + +G +H Y+ K +L+ + +G +L+ Y KC + A
Sbjct: 624 KPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDAN 683
Query: 487 MVFDAMRE-KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ + + + KN V W+A I GY G SL +F M + +V+ +E FT++L ACS
Sbjct: 684 KLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEM 743
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
+ +G K + + FV ++D+ ++ G + + E + + ++ + +
Sbjct: 744 AALTDG-KEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNS 802
Query: 606 FLHGCGLYSRFDLGEVMIKKMLE--LHPD 632
+ G + ++ +KM E + PD
Sbjct: 803 MIVGFAKNGYANEALLLFQKMQESQIKPD 831
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/550 (26%), Positives = 271/550 (49%), Gaps = 60/550 (10%)
Query: 68 FHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYA-RSVFDSMPNPDFYSFQV-MIRWYFLN 124
HA ++ GL + LV +YG G V YA R++ P + ++ + +
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134
Query: 125 DLYKDIVEFYKCMRKRL-KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FV 182
+D+++ ++ +R + D F + VL AC L ++ G +VHC+++K G S F
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
GLVDMYAKC ++ +R++FD + + WTSMIAGY + Q+ L LF+RM +
Sbjct: 195 QAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGS 254
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+Q+T ++++ A + G + DAR+
Sbjct: 255 VPDQVTCVTIISTLASM-----------------------------------GRLGDART 279
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+ + V+W A+I Y+QSG + L+ D K P T AS+LSA+A +
Sbjct: 280 LLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTA 339
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+ GR +H+ ++ GL+ + V ++L+++Y K I+DA+ +F+ ++EK+++ WN+I+ G
Sbjct: 340 FDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYG 399
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
N + D T VSV+ AC +L ++ +G +H + K G + +
Sbjct: 400 FVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNG-MDA 458
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+++V A+L+ Y+K G A+ +F + K++V+W+A+I G + G ++ + M
Sbjct: 459 DLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMK 518
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ +EV F T ++ACS+ + G K +S + + ++DL ++ G +
Sbjct: 519 FYGIALDEVSFATAINACSNIWAIETG-KQIHSASIKYNVCSNHAVGSSLIDLYSKFGDV 577
Query: 585 EEALEFMENM 594
E + + + ++
Sbjct: 578 ESSRKVLAHV 587
Score = 208 bits (529), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 148/580 (25%), Positives = 272/580 (46%), Gaps = 63/580 (10%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C G+L + H ++ G + C LV MY G V AR +FD + PD
Sbjct: 163 VLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPD 222
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ MI Y Y+ + + M K
Sbjct: 223 TICWTSMIAGYHRVGRYQQALALFSRMEK------------------------------- 251
Query: 171 EIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+G PD ++ A +G +R + + V+W ++IA Y Q+ E
Sbjct: 252 ----MGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSE 307
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L+ M++ + + T S+++A A + A +G+ +H +K G++ N + ++L++
Sbjct: 308 VFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLIN 367
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+YVK G I DA+ VFD ++V W A++ G+ Q+ ++ +++F + AD + T
Sbjct: 368 LYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFT 427
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
SVL A L +L++GR VH + I+ G++ D V NA++DMY+K I A+ +F
Sbjct: 428 FVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIP 487
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
KD ++WN++I GL N ++ D V+ + I+AC+++ A++ G
Sbjct: 488 VKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQ 547
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+H+ S K + SN VG++L++ Y+K GD +S+R V + + V +A+I G
Sbjct: 548 IHSASIKYN-VCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNN 606
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSH--TGMVGEGWKCFYSMCRDFKFVPSMK 569
++ LF +L + +P+ FT+ILS C+ + ++G+ C+ S+
Sbjct: 607 REDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLG 666
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+ +V + + LE+A + +E +P ++ + A + G
Sbjct: 667 --ISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISG 704
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 225/484 (46%), Gaps = 66/484 (13%)
Query: 168 VHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQN 224
+H I+++G P L LVD+Y + +G + + + + +S+++ + ++
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134
Query: 225 DCAQEGLVLFNRMREGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
++ L F R+R +Q + +++AC++L AL G+ +H +LK G +
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
L+DMY KCG + DAR +FD + D + WT+MI GY + G +AL LF+ +
Sbjct: 195 QAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGS 254
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYI 403
P+ VT +++S A +G RLG DAR +
Sbjct: 255 VPDQVTCVTIISTLASMG-------------RLG---------------------DARTL 280
Query: 404 FETTSEKDVIAWNSII-----SGLDDNV------------SPDAVTLVSVISACASLGAV 446
+ +AWN++I SGLD V P T S++SA A++ A
Sbjct: 281 LKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAF 340
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
G +HA + K G L +NV+VG++L+N Y K G A+ VFD EKN V W+A++ G
Sbjct: 341 DEGRQIHATAVKHG-LDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYG 399
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
+ ++ +F M +++ ++ F ++L AC + + G + C K
Sbjct: 400 FVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVH---CITIKNGM 456
Query: 567 SMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV--M 622
+V M+D+ ++ G ++ A +P++ VS + A + GL + GE M
Sbjct: 457 DADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVS-WNALI--VGLAHNEEEGEAINM 513
Query: 623 IKKM 626
+K+M
Sbjct: 514 LKRM 517
>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19191, mitochondrial; Flags: Precursor
gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 304/569 (53%), Gaps = 21/569 (3%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
++ M++ E +NF F V KAC L D+ VH ++K D FV T VDM+
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC + + +VF+ +++ +W +M++G+ Q+ + LF MR + + +T+ +
Sbjct: 99 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ + + ++L + +H +++G+++ + + Y KCG++ A+ VF+ + D
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 312 --LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW +M Y+ G A L+ +F P+ T ++ ++ L GR++
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 278
Query: 370 HSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------L 422
HS I LG +D IN + MY+K AR +F+ + + ++W +ISG +
Sbjct: 279 HSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 423 DDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
D+ ++ PD VTL+S+IS C G+++ G + A + G NV + A
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA 398
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ Y+KCG AR +FD EK VTW+ MI GY + G +L LFS M++ + +PN
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 458
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
+ F +L AC+H+G + +GW+ F+ M + + P + HY CMVDLL R G+LEEALE +
Sbjct: 459 HITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELI 518
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
NM +PD ++GA L+ C ++ + E + + L P A YV ++N+YA+ G W
Sbjct: 519 RNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD 578
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDLDIAN 680
++R +MKQR + K PG S++ ++ N
Sbjct: 579 GFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 216/445 (48%), Gaps = 32/445 (7%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+V +W I V + E L+LF M+ G E N T + ACA+L + + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
+++K + + TA +DM+VKC ++ A VF+ + D +W AM+ G+ QSG+ D
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
KA LF + + + P+ VT+ +++ +++ +L + +H++GIRLG++ TV N +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 389 DMYAKCHVIADARYIFETTSEKD--VIAWNSIISG-----------------LDDNVSPD 429
Y KC + A+ +FE D V++WNS+ L + PD
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T +++ ++C + + G +H+++ G ++ ++ Y+K D SAR++F
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLG-TDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M + V+W+ MI GY +GD +LALF M+ +P+ V +++S C G +
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 550 EG-W----KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G W Y RD + + ++D+ ++ G + EA + +N P E V +
Sbjct: 375 TGKWIDARADIYGCKRDNVMICN-----ALIDMYSKCGSIHEARDIFDNTP-EKTVVTWT 428
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLEL 629
+ G L F + KM++L
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDL 453
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 239/545 (43%), Gaps = 63/545 (11%)
Query: 63 GSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
G + HA LI +D T V M+ V YA VF+ MP D ++ M+ +
Sbjct: 69 GCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGF 128
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
+ ++ MR D+ ++++ + + +H +++G
Sbjct: 129 CQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM- 237
V + Y KC D+ S++ VF+ + D+ VVSW SM Y A + L+ M
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
RE F + + T +L +C L QG+ +H + + +G + + + + MY K +
Sbjct: 249 REEF-KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
AR +FD + S VSWT MI GY + G D+AL LF + P+ VT+ S++S
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 358 AQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ G+L G+ + + G ++ + NAL+DMY+KC I +AR IF+ T EK V+ W
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 416 NSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
++I+G +D + P+ +T ++V+ ACA G+++ G + + K
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMK 486
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
Q VY + L+ Y S M+ G +G +L
Sbjct: 487 Q------VYNISPGLDHY------------------------SCMVDLLGRKGKLEEALE 516
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH-YVCMVDL 577
L +M +P+ I+ +L+AC V + S+ F P M YV M ++
Sbjct: 517 LIRNM---SAKPDAGIWGALLNACKIHRNVKIAEQAAESL---FNLEPQMAAPYVEMANI 570
Query: 578 LARAG 582
A AG
Sbjct: 571 YAAAG 575
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 10/276 (3%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+NL C++ +L + H+ I G D + +SMY AR +FD M +
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG--M 166
S+ VMI Y + + + M K ++ D ++ C + ++ G +
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
Query: 167 KVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+I + + L+DMY+KC I +R +FD T +K VV+WT+MIAGY N
Sbjct: 380 DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGI 439
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL--V 284
E L LF++M + + N IT +++ ACA +L +G W + +I+K I+ L
Sbjct: 440 FLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNISPGLDHY 498
Query: 285 TALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMI 319
+ ++D+ + G + +A + + + D W A++
Sbjct: 499 SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 36 ELDQTFASFHSL------PS-IPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK---C 82
++D+ A FH++ P + L+L+ C GSL K A + G D C
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L+ MY G + AR +FD+ P ++ MI Y LN ++ + ++ + M
Sbjct: 397 NA-LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY 455
Query: 143 EHDNFVFSKVLKACCELRDIDEG 165
+ ++ F VL+AC +++G
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKG 478
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 207/624 (33%), Positives = 316/624 (50%), Gaps = 71/624 (11%)
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHD----------NFVFSKVLKACCELRDIDEGMKVHC 170
YF+ D K+ E+ + + + +H N + + C + + + +H
Sbjct: 104 YFIADSEKEKEEWINSIGRSIVQHSSPTPASATATNVGDRALFQQCTSFKQLKQ---IHA 160
Query: 171 EIVKVGG-PDSFVLTGL--VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI-AGYVQNDC 226
++++ D + + L ++ + +R+VFD+ N+ SW +I A +D
Sbjct: 161 QMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALATSSDP 220
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
Q LV + + N+ T L+ A A+ R GK +HG +K + ++ +
Sbjct: 221 IQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNS 280
Query: 287 LLDMYVKCGNIRDARSVFD--ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
L+ Y CG++ A VF+ E + D+VSW +M+ G+ Q GYPDKAL LF +
Sbjct: 281 LIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVH 340
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC--------- 394
PN VT+ SV+SA A+ NL +GR V R + + V NA +DM+ KC
Sbjct: 341 PNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGL 400
Query: 395 ------------HVIAD----------ARYIFETTSEKDVIAWNSIISGLDDN------- 425
I D AR IF++ KD+ AWN +ISG + +
Sbjct: 401 FDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEAL 460
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
PD VTL+S +SACA LGA+ +G +H Y K+ + N + T+L+
Sbjct: 461 AIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE-RIQLNRNLATSLI 519
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y+K GD + A VF ++ K+ WSAMI G M G G ++ LF DM +V+PN V
Sbjct: 520 DMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSV 579
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
FT +L ACSH+G+V EG + F M R + VP KHY CMVD+L RAG LEEAL+F+E
Sbjct: 580 TFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEG 639
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
MP+ P S++GA L C ++ +L E ++LE+ P YVL+SNLYA G W V
Sbjct: 640 MPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGV 699
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+++R+ M+ GL K GCS +++D
Sbjct: 700 SELRQQMRDSGLKKETGCSSIEID 723
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 245/517 (47%), Gaps = 59/517 (11%)
Query: 55 LLGLCKSTGSLKAFHA-LLIVDGLTNDKCNTKL--VSMYGSFGHVKYARSVFDSMPNPDF 111
L C S LK HA +L + L + ++L + + SF + YAR VFD +P P+
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204
Query: 112 YSFQVMIRWYFL-NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
YS+ ++IR +D + ++ F + + + F F ++KA E R G VH
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHG 264
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCA 227
+K G D FVL L+ YA C + + VF+ E +K++VSW SM+ G+VQ
Sbjct: 265 MAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYP 324
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ L LF RMR V N +T+ S+++ACAK L G+ + YI + + +N ++ A
Sbjct: 325 DKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNAT 384
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTA------------------------------ 317
+DM+VKCG + AR +FD + D+VSWT
Sbjct: 385 IDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWN 444
Query: 318 -MIVGYTQSGYPDKALKLFTDKKW--ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+I GY QSG P +AL +F + + + P+ VT+ S LSA AQLG +++G +H
Sbjct: 445 VLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIK 504
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------- 422
+ ++ + + +L+DMY+K + A +F + KDV W+++I+GL
Sbjct: 505 KERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIE 564
Query: 423 ------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ V P++VT +++ AC+ G V G L + + + +++
Sbjct: 565 LFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVL 624
Query: 477 AKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ G + A + M + W A++G + G+
Sbjct: 625 GRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGN 661
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 209/632 (33%), Positives = 309/632 (48%), Gaps = 71/632 (11%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
KA HA +I + LV++Y ++ A+ VF+ + N D S+ +I Y +
Sbjct: 26 KALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQHG 85
Query: 126 LY--KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFV 182
++E ++ MR + F+ V A L D G H +K+ D FV
Sbjct: 86 PSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFV 145
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ L++MY K +R+VFD ++N VSW +MI+GY A E L LF MR
Sbjct: 146 GSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEE 205
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N+ S+++A ++ GK +H +K G+ + AL+ MY KCG++ DA
Sbjct: 206 GENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQ 265
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F+ + ++W+AMI G QSG DKALKLF+ + P+ T V++A + LG
Sbjct: 266 TFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINACSDLGA 325
Query: 363 LNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
G+ VH ++LG E V+ ALVDMYAKC I DAR F+ E D++ W S+I G
Sbjct: 326 AWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGG 385
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
N + P+ +T+ SV+ AC+SL A++ G +HA + K G
Sbjct: 386 YVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGF-GL 444
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V +G+AL YAKCG + +VF M ++ ++W+AMI G G G +L LF +M
Sbjct: 445 EVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQ 504
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
E +P+ V F ILSACSH G+V GW F M +F P ++HY CMVD+L+RAG+L
Sbjct: 505 LEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEHYACMVDILSRAGKL 564
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+EA+EF E+ I+
Sbjct: 565 KEAIEFTESATID----------------------------------------------- 577
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
G W V +VR +MK RG+SK PGCS ++L
Sbjct: 578 --HGMWEDVERVRRMMKLRGVSKEPGCSWIEL 607
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 128/251 (50%), Gaps = 21/251 (8%)
Query: 362 NLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+L G+ +H+ I+ + N+LV++YAKC + +A+++FE KDV++WN II+G
Sbjct: 21 SLQKGKALHAQIIKSSSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIING 80
Query: 422 LD-------------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+N +P+A T V +A ++L G HA + K
Sbjct: 81 YSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSC 140
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+V+VG++L+N Y K G AR VFD M E+N+V+W+ MI GY Q +L LF
Sbjct: 141 -RDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M EE NE +FT++LSA + +V G K + + + + +V + A+ G
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNG-KQIHCIAVKNGLLSIVSVGNALVTMYAKCG 258
Query: 583 RLEEALEFMEN 593
L++AL+ E
Sbjct: 259 SLDDALQTFET 269
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/502 (36%), Positives = 285/502 (56%), Gaps = 20/502 (3%)
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
D+ +R++F + + + +MI GY ++ E + L+ M E V + T ++
Sbjct: 60 DLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLA 119
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
ACA+L A+ G+ H +LK G + ++ AL+ Y CG+ A VFDE D+V+
Sbjct: 120 ACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVT 179
Query: 315 WTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
W MI + G +KA L + K + P+ VT+ S++ A AQLGNL G+ +HS
Sbjct: 180 WNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYS 239
Query: 374 IRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD--------- 423
LGL E+ V NA++DMY KC I A+ +F EKDV++W S++SGL
Sbjct: 240 KELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEAL 299
Query: 424 --------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ + D +TLV V+SACA GA+ G +H K + + ++ + TAL++
Sbjct: 300 ALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEI-NCDLVLETALVDM 358
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
YAKCG A VF MR +N TW+A+IGG M G G +++LF M ++++ P++V F
Sbjct: 359 YAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTF 418
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+L ACSH G+V EG F +M F+ P M+HY C+VDLL RA ++++AL F+ENMP
Sbjct: 419 IALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP 478
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
I+ + L+ L C FDL E + ++++EL PD YV++SNLYA +W +
Sbjct: 479 IKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALK 538
Query: 656 VRELMKQRGLSKSPGCSLVDLD 677
+R+ MK +G+ K+PGCS ++L+
Sbjct: 539 LRKQMKNKGIEKTPGCSWIELN 560
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 209/436 (47%), Gaps = 40/436 (9%)
Query: 55 LLGLCKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C G++K FH ++ +G +D L+ Y + G A VFD D
Sbjct: 117 VLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRD 176
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRK--RLKEHDNFVFSKVLKACCELRDIDEGMKV 168
++ +MI + L + + M K L+ D ++ AC +L +++ G +
Sbjct: 177 VVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRP-DEVTMVSLVPACAQLGNLERGKFL 235
Query: 169 HCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H ++G ++ V ++DMY KC DI S+++VF+ +K+V+SWTSM++G ++
Sbjct: 236 HSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYF 295
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
QE L LF +M+ +E ++ITL +++ACA+ AL QGK++H I K I + L TAL
Sbjct: 296 QEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETAL 355
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY KCG+I A VF + ++ +W A+I G G+ + A+ LF + P+
Sbjct: 356 VDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDD 415
Query: 348 VTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARY 402
VT ++L A + G ++ G M + I +E Y + VD+ + + DA
Sbjct: 416 VTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCV---VDLLCRARKVDDALA 472
Query: 403 IFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLG----AVQVGS---SLHAY 455
E + ++V +++ AC S G A ++G L
Sbjct: 473 FIENMP-----------------IKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPD 515
Query: 456 STKQGLLSSNVYVGTA 471
S + ++ SN+Y G +
Sbjct: 516 SCGRYVMLSNLYAGVS 531
>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
[Brassica oleracea]
Length = 968
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 210/649 (32%), Positives = 342/649 (52%), Gaps = 36/649 (5%)
Query: 67 AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
A H L++ L D + LVS YG+ G V A VF MP + S+ MIR + N
Sbjct: 205 AVHGLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNG 264
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSK-------VLKACCELRDIDEGMKVHCEIVKVGGP 178
L + E + + + +++ D F+ VL C R+I G VH +K+
Sbjct: 265 LSE---ECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLD 321
Query: 179 DSFVLT-GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
V+ L+DMY+KC I ++ +F +KNVVSW +M+ G+ + L +M
Sbjct: 322 KEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQM 381
Query: 238 REGF--VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKC 294
G + +++T+ + V C + L K LH Y LK N+ LV A + Y KC
Sbjct: 382 LAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKC 441
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G++ A VF + S + SW A+I GY+QS P +L + K + P+ T+ S+L
Sbjct: 442 GSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLL 501
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
SA +Q+ +L +G+ VH L IR LE D V +L+ +Y C ++ A +F+ +K ++
Sbjct: 502 SACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLV 561
Query: 414 AWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
+WN++++G N V P ++++SV AC+ L ++++G H Y+
Sbjct: 562 SWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYA 621
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K LL N ++ ++++ YAK G + VF+ ++E++ +W+AM+ GYG+ G +
Sbjct: 622 LK-CLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEA 680
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
+ LF +M P+E+ F +L+AC+H+G+V EG M F P++KHY C++D
Sbjct: 681 IKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVID 740
Query: 577 LLARAGRLEEALEF-MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
+L RAG+L+EAL+ E M EP V ++ L C ++ ++GE + K+ P+K
Sbjct: 741 MLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPE 800
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSF 684
YVL+SNLYA G+W V +VR+ MK+ L K GCS ++L+ FSF
Sbjct: 801 NYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELN-GKVFSF 848
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 166/575 (28%), Positives = 283/575 (49%), Gaps = 47/575 (8%)
Query: 77 LTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-F 133
L+ND C T++++MY G +RSVFD++ + + + +I Y N+LY +++E F
Sbjct: 113 LSNDDVLC-TRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMF 171
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
K + + DNF F V+KAC + ++ G+ VH +VK D FV LV Y
Sbjct: 172 VKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGT 231
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE----GNQIT 248
+ + +VF ++N+VSW SMI + N ++E +L +M E E + T
Sbjct: 232 NGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVAT 291
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L +++ CA+ R + GK +HG +K+ ++ + AL+DMY KCG I DA+ +F
Sbjct: 292 LATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNN 351
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ ++VSW M+ G++ +G K L D + VTI + + + L
Sbjct: 352 NKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNL 411
Query: 367 RMVH--SLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
+ +H SL + V NA V YAKC ++ A +F + K V +WN++I G
Sbjct: 412 KELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQ 471
Query: 423 --DDNVS-------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
D +S PD T+ S++SAC+ + ++++G +H + L + +
Sbjct: 472 SSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRN-RLERDSF 530
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V +LL+ Y CG+ +A ++FDAM +K V+W+ M+ GY G +L+LF M+
Sbjct: 531 VYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYG 590
Query: 528 VQPNEVIFTTILSACS-----HTGMVGEGW--KCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
VQP E+ ++ ACS G G+ KC + D F+ ++D+ A+
Sbjct: 591 VQPCEISMMSVFGACSLLPSLRLGREAHGYALKC---LLEDNAFIA-----CSVIDMYAK 642
Query: 581 AGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
G + E+ + + E V+ + A + G G++ R
Sbjct: 643 NGSVMESFKVFNGLK-ERSVASWNAMVMGYGIHGR 676
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 260/573 (45%), Gaps = 71/573 (12%)
Query: 160 RDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
+DI G K+H + + D + T ++ MY+ C SR VFD KN+ W ++
Sbjct: 95 KDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAV 154
Query: 218 IAGYVQNDCAQEGLVLFNRM--REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
I+ Y +N+ L +F +M G + N T +V ACA + + G +HG ++K
Sbjct: 155 ISSYSRNELYHNVLEMFVKMITESGLLPDN-FTFPCVVKACAGVSEVQVGLAVHGLVVKT 213
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
+ + + AL+ Y G++ DA VF + +LVSW +MI ++ +G ++ L
Sbjct: 214 RLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLL 273
Query: 336 TDKKWAD----FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDM 390
D F P+ T+A+VL A+ + +G+ VH L ++L L+ V+ NAL+DM
Sbjct: 274 GQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDM 333
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLD-------------------DNVSPDAV 431
Y+KC I DA+ IF+ + K+V++WN+++ G ++ D V
Sbjct: 334 YSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEV 393
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
T+++ + C + LH YS KQ + +N V A + YAKCG A VF +
Sbjct: 394 TILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCS 453
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+R K +W+A+IGGY D SL + M + + P+ ++LSACS + G
Sbjct: 454 IRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLG 513
Query: 552 WKCFYSMCRD------FKFVPSMKHYV------------------------CMVDLLARA 581
+ + R+ F ++ + Y+ MV+ +
Sbjct: 514 KEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQN 573
Query: 582 GRLEEALEFMENM---PIEP-DVSLFGAFLHGCGLYSRFDLGE----VMIKKMLELHPDK 633
G E AL M ++P ++S+ F C L LG +K +LE +
Sbjct: 574 GFPERALSLFRQMVLYGVQPCEISMMSVF-GACSLLPSLRLGREAHGYALKCLLEDNAFI 632
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
AC + ++YA +G + +V +K+R ++
Sbjct: 633 ACSVI---DMYAKNGSVMESFKVFNGLKERSVA 662
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 205/434 (47%), Gaps = 37/434 (8%)
Query: 48 PSIPCL-NLLGLC---KSTGSLKAFHALLIVDGLTNDK---CNTKLVSMYGSFGHVKYAR 100
P + L +L +C + G K H L + L+ DK N L+ MY G + A+
Sbjct: 287 PDVATLATVLPVCARDREIGVGKGVHGLAM--KLSLDKEVVVNNALMDMYSKCGCINDAQ 344
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-----EHDNFVFSKVLKA 155
+F N + S+ M+ + DI + + +R+ L D +
Sbjct: 345 VIFKLNNNKNVVSWNTMVGGF---SAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPV 401
Query: 156 CCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS 213
C E + ++HC +K + V V YAKC + + +VF K V S
Sbjct: 402 CFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNS 461
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W ++I GY Q+ + L + +M+ + + T+ SL++AC+++++L GK +HG I+
Sbjct: 462 WNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLII 521
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
+ +E +S + +LL +Y+ CG + A +FD + LVSW M+ GY Q+G+P++AL
Sbjct: 522 RNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALS 581
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYA 392
LF P +++ SV A + L +L +GR H ++ LED I +++DMYA
Sbjct: 582 LFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYA 641
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISG------------LDDNVS-----PDAVTLVS 435
K + ++ +F E+ V +WN+++ G L + + PD +T +
Sbjct: 642 KNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLG 701
Query: 436 VISACASLGAVQVG 449
V++AC G V G
Sbjct: 702 VLTACNHSGLVHEG 715
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 180/520 (34%), Positives = 293/520 (56%), Gaps = 29/520 (5%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D+FV + L +Y + +R+VFD + V W +++AG ++ + F RM
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSEAVES----FARMV 203
Query: 239 -EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
+G V + TL S++ A A++ + G+ +H + K G+ + H++T L+ +Y KCG++
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
AR +FD + DLV++ A+I GY+ +G ++ LFT+ +PN T+ +++
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323
Query: 358 AQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ G+ + + +H ++ G + V A+ ++ + + + AR F+T EK + +WN
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++ISG N V P+ +T+ S +SACA LGA+ +G LH T++
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L NVYV TAL++ YAKCG AR +F+ M KN V+W+AMI GYG+ G G +L L
Sbjct: 444 DL-EPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKL 502
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
+ DML+ + P F ++L ACSH G+V EGWK F SM D+ P ++H CMVDLL
Sbjct: 503 YKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLG 562
Query: 580 RAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
RAG+L+EA E + P + P V +GA L C ++ DL ++ +K+ EL P+ + Y
Sbjct: 563 RAGQLKEAFELISEFPKSAVGPGV--WGALLGACMVHKDSDLAKLASQKLFELDPENSGY 620
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YVL+SNL+ S ++ VR+ K R L K+PG +L+++
Sbjct: 621 YVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEI 660
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 236/481 (49%), Gaps = 32/481 (6%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L +Y V +AR VFD++P+PD + ++ ++ + F + +
Sbjct: 153 SALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGSE---AVESFARMVCDGSVR 209
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D + VL A E+ D+ G VH K G VLTGL+ +Y+KC D+ S+R +
Sbjct: 210 PDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCL 269
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD ++V++ ++I+GY N + LF + + N TL +L+ +
Sbjct: 270 FDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHD 329
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+ LHG++LK G NS + TA+ ++ + ++ AR FD + + SW AMI GY
Sbjct: 330 LLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGY 389
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
Q+G + A+ LF + PN +TI+S LSA AQLG L++G+ +H + LE +
Sbjct: 390 AQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNV 449
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDD 424
V+ AL+DMYAKC I++AR IF T K+V++WN++I+G LD
Sbjct: 450 YVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDA 509
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
++ P + T +SV+ AC+ G V+ G + T ++ + T +++ + G +
Sbjct: 510 HLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQLKE 569
Query: 485 ARMVFDAMRE--KNTV---TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
A F+ + E K+ V W A++G + D LA + E+ P + +L
Sbjct: 570 A---FELISEFPKSAVGPGVWGALLGACMVHKD--SDLAKLASQKLFELDPENSGYYVLL 624
Query: 540 S 540
S
Sbjct: 625 S 625
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 119/250 (47%), Gaps = 13/250 (5%)
Query: 66 KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H ++ G T N +T + +++ ++ AR FD+MP S+ MI Y N
Sbjct: 333 QCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQN 392
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
L + V ++ M K + S L AC +L + G +H I + P+ +V+
Sbjct: 393 GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVM 452
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L+DMYAKC I +R++F+ +KNVVSW +MIAGY + E L L+ M + +
Sbjct: 453 TALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLL 512
Query: 244 GNQITLGSLVTACAKLRALHQGKW------LHGYILKIGIEINSHLVTALLDMYVKCGNI 297
T S++ AC+ + +G W Y + GIE T ++D+ + G +
Sbjct: 513 PTSATFLSVLYACSHGGLVEEG-WKVFRSMTDDYAINPGIE----HCTCMVDLLGRAGQL 567
Query: 298 RDARSVFDEL 307
++A + E
Sbjct: 568 KEAFELISEF 577
>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
Length = 610
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 190/508 (37%), Positives = 287/508 (56%), Gaps = 24/508 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ +LK C D+ G VH ++ G +S T L +MY KCR +R+VFD
Sbjct: 61 TFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRVFDRM 120
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR--EGFVEGNQITLGSLVTACAKLRALHQ 264
++ V+W +++AGY +N + RM+ EG + + ITL S++ ACA R L
Sbjct: 121 PARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGA 180
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ +H + L+ G++ ++ TA+LD Y KCG + AR+VFD + + VSW AMI GY +
Sbjct: 181 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAE 240
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +AL LF + + L A +LG L+ R VH L +R+GL+ + +V
Sbjct: 241 NGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNVSV 300
Query: 384 INALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGLD-----------------DN 425
+NAL+ Y+KC A + F E +K I+WN++I G +N
Sbjct: 301 MNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQLEN 360
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V PD+ TLVSVI A A + +H YS + L ++YV TAL++ Y+KCG A
Sbjct: 361 VKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQL-DQDIYVLTALIDMYSKCGRVTIA 419
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R +FD+ R+++ +TW+AMI GYG G G ++ LF +M PNE F ++L+ACSH
Sbjct: 420 RKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHA 479
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG K F SM +D+ P M+HY +VDLL RAG+++EA F++NMPIEP +S++GA
Sbjct: 480 GLVDEGRKYFASM-KDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISVYGA 538
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDK 633
L C L+ +L E +K+ EL P++
Sbjct: 539 MLGACKLHKNVELAEESAQKIFELGPEE 566
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 253/546 (46%), Gaps = 36/546 (6%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
LL LC + L +A HA L GL ++ T L +MY AR VFD MP D
Sbjct: 65 LLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRVFDRMPARD 124
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL--KEHDNFVFSKVLKACCELRDIDEGMKV 168
++ ++ Y N L +E M+ ++ D+ VL AC + R + +V
Sbjct: 125 RVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGACREV 184
Query: 169 HCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H ++ G + V T ++D Y KC + ++R VFD +N VSW +MI GY +N A
Sbjct: 185 HAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAENGNA 244
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E L LF RM + V+ + + + AC +L L + + +H ++++G++ N ++ AL
Sbjct: 245 SEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNVSVMNAL 304
Query: 288 LDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
+ Y KC A F+EL +SW AMI+G+TQ+G + A +LF + + P+
Sbjct: 305 ITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQLENVKPD 364
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFE 405
T+ SV+ A A + + R +H IR L +D V+ AL+DMY+KC + AR +F+
Sbjct: 365 SFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIARKLFD 424
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
+ ++ VI WN++I G + P+ T +SV++AC+ G V
Sbjct: 425 SARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDE 484
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGY 507
G A GL + GT L++ + G A M E + AM+G
Sbjct: 485 GRKYFASMKDYGLEPGMEHYGT-LVDLLGRAGKVDEAWSFIQNMPIEPGISVYGAMLGAC 543
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH-----TGMVGEGWKCFY-SMCRD 561
+ + LA S E+ P E + ++A G+ + KC Y SM
Sbjct: 544 KLHKN--VELAEESAQKIFELGPEEGSLSQTMNASMEELARCPGIGEQKVKCLYDSMSHS 601
Query: 562 FKFVPS 567
F+P+
Sbjct: 602 NGFLPA 607
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 192/361 (53%), Gaps = 16/361 (4%)
Query: 47 LPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSM 106
LP+ +LG C+ + AF +D L N +T ++ Y G V+ AR+VFD M
Sbjct: 169 LPACADARVLGACRE---VHAFALRAGLDELVN--VSTAVLDAYCKCGAVEAARAVFDWM 223
Query: 107 PNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P + S+ MI Y N + + + F++ +++ + D V + L+AC EL +DE
Sbjct: 224 PVRNSVSWNAMIDGYAENGNASEALALFWRMVQEGVDVTDAAVLA-ALQACRELGCLDEA 282
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET-LDKNVVSWTSMIAGYVQ 223
+VH +V+VG + V+ L+ Y+KC+ + F+E + K +SW +MI G+ Q
Sbjct: 283 RRVHELLVRVGLKSNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQ 342
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
N C+++ LF RM+ V+ + TL S++ A A + Q +W+HGY ++ ++ + ++
Sbjct: 343 NGCSEDAERLFARMQLENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYV 402
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
+TAL+DMY KCG + AR +FD +++W AMI GY G+ A++LF + K
Sbjct: 403 LTALIDMYSKCGRVTIARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGS 462
Query: 344 FPNHVTIASVLSASAQLGNLNMGRM----VHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
PN T SVL+A + G ++ GR + G+ G+E Y LVD+ + + +
Sbjct: 463 LPNETTFLSVLAACSHAGLVDEGRKYFASMKDYGLEPGMEHY---GTLVDLLGRAGKVDE 519
Query: 400 A 400
A
Sbjct: 520 A 520
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/499 (35%), Positives = 276/499 (55%), Gaps = 50/499 (10%)
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
++ L+++ RMR + ++ + L+ A +++++L +G +HG K+G + + + T L
Sbjct: 104 EKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGL 163
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MY CG I +AR +FD++ D+V+W+ MI GY QSG + AL LF + K + P+
Sbjct: 164 VRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDE 223
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHV---------- 396
+ +++VLSA + GNL+ G+M+H + + D + +ALV MYA C
Sbjct: 224 MMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEK 283
Query: 397 ---------------------IADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
I +AR +F +KD++ W+++ISG ++
Sbjct: 284 MTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLF 343
Query: 426 -------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ PD VT++SVI+ACA LGA+ +H + K G + + AL+ YAK
Sbjct: 344 NEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGF-GGALPINNALIEMYAK 402
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG + AR +FD M KN ++W+ MI + M GD G +L F M +E ++PN + F +
Sbjct: 403 CGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGV 462
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L ACSH G+V EG K FYSM + P HY CMVDL RA L EALE +E MP+ P
Sbjct: 463 LYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAP 522
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
+V ++G+ + C ++ +LGE K++LEL PD +V +SN+YA RW V QVR+
Sbjct: 523 NVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRK 582
Query: 659 LMKQRGLSKSPGCSLVDLD 677
LMK +G+SK GCS +L+
Sbjct: 583 LMKHKGISKERGCSRFELN 601
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 149/508 (29%), Positives = 254/508 (50%), Gaps = 59/508 (11%)
Query: 61 STGSLKAFHALLIVDGLTNDKCNTKLVSMYGSF----GHVKYARSVFDSMPNPDFYSFQV 116
S LK HA ++ L D+ + LV + S + YA SVF+ +P P+ +
Sbjct: 35 SLTHLKQVHAQILRSKL--DRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNR 92
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG 176
+R ++ + + Y+ MR + D F F +LKA ++ + EG+++H K+G
Sbjct: 93 FLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLG 152
Query: 177 -GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
D FV TGLV MYA C I +R +FD+ ++VV+W+ MI GY Q+ + L+LF
Sbjct: 153 FDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFE 212
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
M+ VE +++ L ++++AC + L GK +H +I++ I ++ HL +AL+ MY CG
Sbjct: 213 EMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCG 272
Query: 296 N-------------------------------IRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ I +ARSVF+++ DLV W+AMI GY +
Sbjct: 273 SMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAE 332
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
S P +AL LF + + P+ VT+ SV++A A LG L+ + +H + G I
Sbjct: 333 SDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPI 392
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
NAL++MYAKC + AR IF+ K+VI+W +IS D+N+
Sbjct: 393 NNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENI 452
Query: 427 SPDAVTLVSVISACASLGAVQVGSSL-HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
P+ +T V V+ AC+ G V+ G + ++ + + +V+ G +++ + + + A
Sbjct: 453 EPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYG-CMVDLFGRANLLREA 511
Query: 486 RMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ +AM N + W +++ + G+
Sbjct: 512 LELVEAMPLAPNVIIWGSLMAACRVHGE 539
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 207/671 (30%), Positives = 341/671 (50%), Gaps = 51/671 (7%)
Query: 37 LDQTFASFHSLPSIP------CLNLLGLCKSTGSLK---AFHALLIVDGLTNDK---CNT 84
L+ S LPS+P C L C + G + A H ++ G C
Sbjct: 41 LEDELTSLAILPSVPGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCAN 100
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L++MYG G + AR +FD MP + SF +++ + ++ ++ +R E
Sbjct: 101 VLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEV 160
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ FV + +LK + VH K+G ++FV +GL+D Y+ C + + VF
Sbjct: 161 NQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVF 220
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ + K+ V WT+M++ Y +NDC + F +L L +CA+
Sbjct: 221 NGIVRKDAVVWTAMVSCYSENDCPENA----------FRCAQSCSL--LAISCAR----- 263
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QG +HG +K + H+ ALLDMY KCG+I+DAR F+ + D++ + MI Y
Sbjct: 264 QG--IHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYA 321
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
QS ++A +LF + PN +++SVL A + L+ G+ +H+ I++G E D
Sbjct: 322 QSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLF 381
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NAL+D YAKC+ + + IF + + + ++WN+I+ G +
Sbjct: 382 VGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQ 441
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ VT SV+ ACAS +++ +H S ++ +++ +G +L++ YAKCG + A
Sbjct: 442 MPCTQVTYSSVLRACASTASIRHAGQIHC-SIEKSTFNNDTVIGNSLIDTYAKCGYIRDA 500
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF + E++ ++W+A+I GY + G +L LF M V+ N++ F +LS C T
Sbjct: 501 LKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCST 560
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V G F SM D PSM+HY C+V LL RAGRL +AL+F+ ++P P ++ A
Sbjct: 561 GLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRA 620
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ LG +K+LE+ P YVL+SN+YA+ G +V +R+ M+ G+
Sbjct: 621 LLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGV 680
Query: 666 SKSPGCSLVDL 676
K PG S V++
Sbjct: 681 RKVPGLSWVEI 691
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 187/621 (30%), Positives = 327/621 (52%), Gaps = 23/621 (3%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N ++S Y G + AR +FD+MP+ ++ +++ WY N+ + + + ++ M
Sbjct: 74 NTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMC 133
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG---LVDMYAKCRD 195
+ D F+ +L C + + +VH VK+G + LT L+ Y + R
Sbjct: 134 RSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRR 193
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+ + +F+E LDK+ V++ ++I GY ++ E + LF +MR+ + + T ++ A
Sbjct: 194 LDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKA 253
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
L G+ LHG + G ++ + +L Y K + + R++F+E+ +D VS+
Sbjct: 254 VVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSY 313
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+I Y+Q+ +++L LF + + F + A++LS +A L +L +GR VH I
Sbjct: 314 NVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIV 373
Query: 376 LGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
+ V N+LVDMYAKC + +A IF++ S++ ++W ++ISG
Sbjct: 374 ATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKL 433
Query: 423 -----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
N+ D T +V+ A A ++ +G LHA+ + G L NV+ G+ L++ YA
Sbjct: 434 FTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYA 492
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG + A VF+ M ++N V+W+A+I Y GDG ++ F+ M+ +QP+ V
Sbjct: 493 KCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILG 552
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+L ACSH G V +G + F +M + P KHY CM+DLL R GR EA + M+ MP E
Sbjct: 553 VLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 612
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQV 656
PD ++ + L+ C +Y L E +++ + + A YV +SN+YA+ G+W V V
Sbjct: 613 PDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAGKWENVRHV 672
Query: 657 RELMKQRGLSKSPGCSLVDLD 677
++ M++RG+ K P S V+++
Sbjct: 673 KKAMRERGIKKVPAYSWVEVN 693
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 228/515 (44%), Gaps = 67/515 (13%)
Query: 146 NFVFSKVLKACCELRDIDEGMK-VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
N V S+ L +LR + V I+K G D+ V+ + + ++ +V+
Sbjct: 8 NEVRSRTLATLRQLRQPPPATRRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVY 67
Query: 204 DETLDKNVVSWTSMIAGYVQ-------------------------------NDCAQEGLV 232
DE KN VS +MI+GYV+ N+ E
Sbjct: 68 DEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFK 127
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDM 290
LF +M + +T +L+ C + +H + +K+G + N L LL
Sbjct: 128 LFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKS 187
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y + + A +F+E+ D V++ +I GY + G +A+ LF + + P+ T
Sbjct: 188 YCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTF 247
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSE 409
+ VL A L + +G+ +H L + G D +V N ++ Y+K + + R +F E
Sbjct: 248 SGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPE 307
Query: 410 KDVIAWNSIIS---------------------GLDDNVSPDAVTLVSVISACASLGAVQV 448
D +++N +IS G D P A +++S A+L ++QV
Sbjct: 308 LDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFA----TMLSIAANLSSLQV 363
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H + S ++VG +L++ YAKC A ++F ++ +++TV+W+A+I GY
Sbjct: 364 GRQVHCQAI-VATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYV 422
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG--MVGEGWKCFYSMCRDFKFVP 566
+G G L LF+ M ++ ++ F T+L A + ++G+ F + + V
Sbjct: 423 QKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVF 482
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
S +VD+ A+ G +++A++ E MP VS
Sbjct: 483 SGSG---LVDMYAKCGSIKDAVQVFEEMPDRNAVS 514
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 87/217 (40%), Gaps = 31/217 (14%)
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G +A V+D M KNTV+ + MI GY GD + LF M + V V +T ++
Sbjct: 58 GQVSAALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTV----VTWTILM 113
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL--EEALEFMENMPIE 597
+ E +K F MCR ++ YV LL + A+ + ++
Sbjct: 114 GWYAGNNHFDEAFKLFRQMCRSC----TLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVK 169
Query: 598 P--DVSLF----GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
D +LF L R DL V+ +++L+ D + L++ Y DG +
Sbjct: 170 LGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILD--KDSVTFNTLITG-YEKDGLYT 226
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFSRVV 688
+ M+Q G S DF+FS V+
Sbjct: 227 EAIHLFLKMRQSGHKPS------------DFTFSGVL 251
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 66 KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA +I G L N + LV MY G +K A VF+ MP+ + S+ +I Y N
Sbjct: 466 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADN 525
Query: 125 -DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSF 181
D I F K ++ L+ D+ VL AC +++G + + + G P
Sbjct: 526 GDGEAAIGAFTKMIQSGLQP-DSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKK 584
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMI 218
++D+ + + ++ DE + + + W+S++
Sbjct: 585 HYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 622
>gi|147797709|emb|CAN61058.1| hypothetical protein VITISV_011618 [Vitis vinifera]
Length = 529
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 281/498 (56%), Gaps = 19/498 (3%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R++ D+ + +W ++I GY++ + +E ++++N +R+ ++ + TL ++ AC
Sbjct: 32 ARRIADQIDGLDTYTWNTIIRGYLEGNDPEEAILIYNHVRKKGLKVDTYTLVFVIKACGL 91
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ +G+ +HG I K+G E + TALL MY + +FDE+ DLV W A+
Sbjct: 92 RPVILEGEQIHGQIFKLGFEFEVIIQTALLSMYGLFDEDCGLQQIFDEMPQRDLVMWNAL 151
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I Y P K ++ D ++ PN VT S+LS + L L G+ VH + +
Sbjct: 152 IAAYAHGNCPYKVREVSYDMVSSNVKPNGVTAVSILSVCSSLRALREGKAVHGYVTKNLI 211
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
E D V NAL+D+Y+KC I DA +F+ ++V++W S+I+G DN
Sbjct: 212 EXDVFVHNALIDVYSKCGSIRDAVQVFQLMPMRNVVSWTSLINGYSDNNCPNEALGFFKQ 271
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ PD +T++ V+ C+ L + ++G + Y K GL+ + + L++ +AKCG
Sbjct: 272 MEAENIRPDEITVLGVVCMCSKLRSFELGEWISQYVVKTGLVKESPAIANVLMDMHAKCG 331
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + A +FD M EK V+W+ MI G M G G +L F M E +P+ ++F ++LS
Sbjct: 332 NIKRACQIFDGMEEKTIVSWTIMIQGLAMYGHGLSALVRFCQMQREGFKPDSLVFLSLLS 391
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSH G+V EGW+CF SM D+ P M+HY CMVD+L RAG ++EA +F++NMPI+PD+
Sbjct: 392 ACSHAGLVDEGWRCFSSMEADYHIXPWMEHYGCMVDILCRAGLVDEAFKFVQNMPIKPDM 451
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++ L C L ++ + EL P K+ YVL+SNL+AS+ W V +VR+ M
Sbjct: 452 IVWRTLLGACXXQGNISLANQVMNXLCELGPKKSEDYVLLSNLFASNAEWDNVXEVRKEM 511
Query: 661 KQRGLSKS-PGCSLVDLD 677
RG++K PGCS ++ D
Sbjct: 512 GDRGVTKQDPGCSFIEAD 529
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 209/402 (51%), Gaps = 24/402 (5%)
Query: 72 LIVDG-LTNDKCNTKLVSMYGSF---GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
+I +G L N +KLV + S G AR + D + D Y++ +IR Y +
Sbjct: 1 MITNGHLHNPTLASKLVVSFASITLPGTTSVARRIADQIDGLDTYTWNTIIRGYLEGNDP 60
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGL 186
++ + Y +RK+ + D + V+KAC I EG ++H +I K+G + + T L
Sbjct: 61 EEAILIYNHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTAL 120
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ MY + +Q+FDE +++V W ++IA Y +C + + M V+ N
Sbjct: 121 LSMYGLFDEDCGLQQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVSSNVKPNG 180
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+T S+++ C+ LRAL +GK +HGY+ K IE + + AL+D+Y KCG+IRDA VF
Sbjct: 181 VTAVSILSVCSSLRALREGKAVHGYVTKNLIEXDVFVHNALIDVYSKCGSIRDAVQVFQL 240
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ ++VSWT++I GY+ + P++AL F + + P+ +T+ V+ ++L + +G
Sbjct: 241 MPMRNVVSWTSLINGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELG 300
Query: 367 RMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
+ ++ GL E + N L+DM+AKC I A IF+ EK +++W +I GL
Sbjct: 301 EWISQYVVKTGLVKESPAIANVLMDMHAKCGNIKRACQIFDGMEEKTIVSWTIMIQGLAM 360
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVG 449
+ PD++ +S++SAC+ G V G
Sbjct: 361 YGHGLSALVRFCQMQREGFKPDSLVFLSLLSACSHAGLVDEG 402
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 193/552 (34%), Positives = 298/552 (53%), Gaps = 62/552 (11%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCR-----DIGSSRQVF 203
F L+ C ++ + + +H I+K LT + A C D + +
Sbjct: 40 FLSTLQTCKSIKGLKQ---IHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLL 96
Query: 204 DETLDKNVVSWTSMIAGY-VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
+ N+ + ++I G N+ + EGLV++ +M + + T+ ++ ACA+ RA+
Sbjct: 97 AQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAV 156
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+G+ +HG +K+G+ + ++ L+ MY C IR AR VFD DLVSWT MI GY
Sbjct: 157 REGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGY 216
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
+ G+ + + L+ + N+N+ D
Sbjct: 217 VKMGFAREGVGLYIIRN---------------------SNVNL--------------DVF 241
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NALVDMY KC AR +F+ K+V++WNS+ISGL
Sbjct: 242 VGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLG 301
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V PD VTLV+V+++CA+LG +++G +HAY + + ++ ++G AL++ YAKCG A
Sbjct: 302 VKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQ-IRADGFIGNALVDMYAKCGSIDQA 360
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
VF AM K+ +++AMI G M G GG +L LFS+M ++P+EV F +L+ACSH
Sbjct: 361 CWVFQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHV 420
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG K F M + P ++HY CMVDLL RAG + EA EF+ NMPIEPD + GA
Sbjct: 421 GLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGA 480
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ + +LGE ++KK+ ++ P K YVL+SN+Y+S RW ++R+ MK+R L
Sbjct: 481 LLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNL 540
Query: 666 SKSPGCSLVDLD 677
K+PGCS ++LD
Sbjct: 541 EKTPGCSSIELD 552
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 161/574 (28%), Positives = 255/574 (44%), Gaps = 111/574 (19%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTND---KCNTKLVSMYGSFGHV--KYARSVFDSMP 107
L+ L CKS LK HA +I + D +T+L ++ + +YA S+ +
Sbjct: 41 LSTLQTCKSIKGLKQIHASIIKTMPSPDAQLTISTRLSALCAQSLPIDPRYALSLLAQLR 100
Query: 108 NPDFYSFQVMIRWYFL--NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P+ + +IR ND + +V YK M + DN+ VLKAC E R + EG
Sbjct: 101 TPNLPLYNAIIRGLATSNNDSIEGLV-VYKQMLSKGIVPDNYTIPFVLKACAESRAVREG 159
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+VH + +K+G D +V L+ MYA C I S+R+VFD + +++VSWT+MI GYV+
Sbjct: 160 EEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKM 219
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
A+EG+ L+ + + + L V
Sbjct: 220 GFAREGVGLY------IIRNSNVNLDVFVG------------------------------ 243
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+DMY+KCG+ AR VF E+ ++VSW +MI G Q G ++L +F +
Sbjct: 244 NALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVK 303
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P+ VT+ +VL++ A LG L +G+ VH+ R + D + NALVDMYAKC I A ++
Sbjct: 304 PDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWV 363
Query: 404 FETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV 446
F+ + KDV ++ ++I GL + PD VT V V++AC+ +G V
Sbjct: 364 FQAMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLV 423
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ G R F+ M +
Sbjct: 424 EEG------------------------------------RKYFEDM--STIYNLRPQLEH 445
Query: 507 YGMQGDGGGSLALFSD----MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
YG D G L ++ + N ++P+ + +L AC G V G S+ +
Sbjct: 446 YGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVELG----ESVMKKI 501
Query: 563 KFVPSMKH--YVCMVDLLARAGRLEEALEFMENM 594
+ + K YV M ++ + A R +AL+ + M
Sbjct: 502 EKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTM 535
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 192/434 (44%), Gaps = 63/434 (14%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H I GL +D + L+ MY ++ AR VFD+ P D S+ MI+ Y
Sbjct: 163 HGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFA 222
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLV 187
++ V Y +R+ + + D FV LV
Sbjct: 223 REGVGLYI-----------------------IRNSNVNL------------DVFVGNALV 247
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
DMY KC D +R+VF E KNVVSW SMI+G Q +E L +F +M+ V+ + +
Sbjct: 248 DMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDV 307
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TL +++ +CA L L GKW+H Y+ + I + + AL+DMY KCG+I A VF +
Sbjct: 308 TLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAM 367
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
D+ S+TAMIVG G KAL LF++ P+ VT VL+A + +G + GR
Sbjct: 368 NRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGR 427
Query: 368 -----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
M +R LE Y +VD+ + +I +A
Sbjct: 428 KYFEDMSTIYNLRPQLEHY---GCMVDLLGRAGLINEAEEFIRNMP-------------- 470
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ PDA L +++ AC G V++G S+ K YV + N Y+
Sbjct: 471 ---IEPDAFVLGALLGACKIHGKVELGESVMKKIEKIEPRKDGAYV--LMSNIYSSANRW 525
Query: 483 QSARMVFDAMREKN 496
+ A + M+E+N
Sbjct: 526 RDALKLRKTMKERN 539
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 334/632 (52%), Gaps = 25/632 (3%)
Query: 64 SLKAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
S KA H ++ G D T L++ Y G K A ++FD MP + SF + + Y
Sbjct: 67 SAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA 126
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
+D + Y + + E + VF+ LK L + +H IVK+G ++F
Sbjct: 127 C----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V L++ Y+ C + S+R VF+ L K++V W +++ YV+N ++ L L + MR
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
N T + + A L A K +HG ILK ++ + LL +Y + G++ DA
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF+E+ D+V W+ MI + Q+G+ ++A+ LF + A PN T++S+L+ A
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+G +H L +++G + D V NAL+D+YAKC + A +F S K+ ++WN++I
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G L + VS VT S + ACASL ++ +G +H + K +
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN-A 481
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
V V +L++ YAKCGD + A+ VF+ M + +W+A+I GY G G +L + M
Sbjct: 482 KKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM 541
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+ + +PN + F +LS CS+ G++ +G +CF SM RD P ++HY CMV LL R+G+
Sbjct: 542 KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQ 601
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L++A++ +E +P EP V ++ A L + + +++L+++P YVLVSN+
Sbjct: 602 LDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNM 661
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
YA +W V +R+ MK+ G+ K PG S ++
Sbjct: 662 YAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 155/370 (41%), Gaps = 24/370 (6%)
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
G+++ C + K +H ILK G ++ LL+ YVK G +DA ++FDE+
Sbjct: 53 GAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPE 112
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+ VS+ + GY + L++ N S L L + +
Sbjct: 113 RNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWL 168
Query: 370 HSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--- 425
HS ++LG + + AL++ Y+ C + AR +FE KD++ W I+S +N
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 426 --------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
P+ T + + A LGA +H K + + VG
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV-LDPRVGVG 287
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
LL Y + GD A VF+ M + + V WS MI + G ++ LF M V PN
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
E ++IL+ C+ G G + + + F + ++D+ A+ +++ A++
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQ-LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 592 ENMPIEPDVS 601
+ + +VS
Sbjct: 407 AELSSKNEVS 416
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 189/607 (31%), Positives = 328/607 (54%), Gaps = 21/607 (3%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G++ ARS+FDSM ++ ++I Y ++ + + + M + D+
Sbjct: 83 YLKSGNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITL 142
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ +L E ++E +VH +VKVG + V L+D Y K R +G + +F +
Sbjct: 143 ATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAE 202
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
K+ V++ +++ GY + + + LF +M++ ++ T +++TA ++ + G+ +
Sbjct: 203 KDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQV 262
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H +++K N + ALLD Y K I +AR +F E+ +D +S+ +I +G
Sbjct: 263 HSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRV 322
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL-GLEDYTVINAL 387
+++L+LF + ++ F A++LS +A NL MGR +HS I + + V N+L
Sbjct: 323 EESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSL 382
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------DD-----------NVSPDA 430
VDMYAKC +A IF + + + W ++ISG +D + D+
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
T S++ ACA+L ++ +G LH+ + G LS NV+ G+AL++ YAKCG + A +F
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRIIRSGCLS-NVFSGSALVDMYAKCGSIKEALQMFQ 501
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
M +N+V+W+A+I Y GDGG +L F M++ +QPN V F +IL ACSH G+V E
Sbjct: 502 EMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEE 561
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G + F SM + +K P +HY MVD+L R+GR +EA + M MP EPD ++ + L+ C
Sbjct: 562 GLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSC 621
Query: 611 GLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
++ +L ++ + + A YV +SN+YA+ G W V +V++ +++RG+ K P
Sbjct: 622 RIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVP 681
Query: 670 GCSLVDL 676
S V++
Sbjct: 682 AYSWVEI 688
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 128/489 (26%), Positives = 235/489 (48%), Gaps = 62/489 (12%)
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS------------- 213
V ++K G P++ V + + D+G++R++FDE KNV+S
Sbjct: 29 VDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKSGN 88
Query: 214 ------------------WTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVT 254
WT +I GY Q++ E LF M R G V + ITL +L++
Sbjct: 89 LSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVP-DHITLATLLS 147
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
+ ++++ +HG+++K+G + + +LLD Y K ++ A +F + D V+
Sbjct: 148 GFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVT 207
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+ A++ GY++ G+ A+ LF + F P+ T A+VL+A Q+ ++ G+ VHS +
Sbjct: 208 FNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVV 267
Query: 375 RLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII-------------- 419
+ + + V NAL+D Y+K I +AR +F E D I++N +I
Sbjct: 268 KCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLE 327
Query: 420 -------SGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
+ D P A TL+S+ + +L ++G +H+ + +S V VG +L
Sbjct: 328 LFRELQFTRFDRRQFPFA-TLLSIAANSLNL---EMGRQIHSQAIVTDAISE-VLVGNSL 382
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
++ YAKC A +F + +++V W+A+I GY +G L LF +M ++ +
Sbjct: 383 VDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
+ +IL AC++ + G + + R + ++ +VD+ A+ G ++EAL+ +
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRIIRS-GCLSNVFSGSALVDMYAKCGSIKEALQMFQ 501
Query: 593 NMPIEPDVS 601
MP+ VS
Sbjct: 502 EMPVRNSVS 510
Score = 39.7 bits (91), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 17/177 (9%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + SL K H+ +I G L+N + LV MY G +K A +F MP
Sbjct: 447 SILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVR 506
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ +I Y N + ++ M + ++ F +L AC ++EG++
Sbjct: 507 NSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYF 566
Query: 170 CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET--------LDKNVVSWTSMI 218
+ +V + L + YA D+ FDE + + + W+S++
Sbjct: 567 NSMTQV-----YKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSIL 618
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 189/550 (34%), Positives = 296/550 (53%), Gaps = 24/550 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
S +L C + + + G+ +H ++K G D F+ +++MYAKC +RQVFDE
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+KN+VSW++MI+GY Q Q + L+++M F+ N+ S+++ACA L A+ G+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQ 121
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+H LK G E S + +L+ MY+KC DA SVF + VS+ A+I G+ ++
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-N 385
++ L+ F + P+ VL NL G +H ++L L+ I N
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSII---SGLDD---------------NVS 427
++ MY++ ++I +A F EKDVI+WN++I S DD NV
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD T S ++ACA L ++ G +HA+ + L ++ VG AL+N YAKCG A
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQ-DLGVGNALVNMYAKCGCIGYAYD 360
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F M N V+W+ +I G+G G G ++ LF M ++P+ V F +L+AC+H G+
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V +G F SM + P ++H+ C++D+L RAGRL EA E+M P D + + L
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
L+ +GE + K +L+L P YVL+SNLYASDG W V + R+ +K GL K
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540
Query: 668 SPGCSLVDLD 677
PG SL++++
Sbjct: 541 EPGHSLIEVN 550
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 201/420 (47%), Gaps = 27/420 (6%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+LL C T +L+ + HA ++ G +D + +++MY GH +AR VFD M
Sbjct: 8 SLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEK 67
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ MI Y + ++ Y M E +VF+ V+ AC L + G K+H
Sbjct: 68 NLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNE---YVFASVISACASLSAVTLGQKIH 124
Query: 170 CEIVKVGGPD-SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+K G SFV L+ MY KC + VF T + N VS+ ++I G+V+N +
Sbjct: 125 SRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLE 184
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
GL F MR+ + ++ ++ C L +G LH +K+ ++ + ++
Sbjct: 185 RGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVII 244
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNH 347
MY + I++A F + D++SW +I + K L++F + + P+
Sbjct: 245 TMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDD 304
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFET 406
T S L+A A L +++ G+ +H+ +R L +D V NALV+MYAKC I A IF
Sbjct: 305 FTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSK 364
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
++++WN+II+G ++ + PD+VT + +++AC G V G
Sbjct: 365 MVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG 424
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 207/442 (46%), Gaps = 41/442 (9%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ L+SMY A SVF + P P+ S+ +I + N + +EF+K MR++
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D F F VL C ++ G ++HC+ VK+ F+ ++ MY++ I + +
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLR 260
F +K+V+SW ++IA D +GL +F M E V + T S + ACA L
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLA 318
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
++ GK +H ++++ + + + AL++MY KCG I A +F ++ +LVSW +I
Sbjct: 319 SMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIA 378
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIR 375
G+ G ++A++LF + P+ VT +L+A G ++ G+ M + GI
Sbjct: 379 GFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIA 438
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVS 435
+E ++ L+DM + + +A + WN D V LVS
Sbjct: 439 PDIEHFS---CLIDMLGRAGRLNEAEEYM-----RKFPFWN------------DPVVLVS 478
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
++SA G V +G L + K ++++ YV L N YA G ++D++ E
Sbjct: 479 LLSASRLHGDVVIGERLAKWLLKLQPVTTSPYV--LLSNLYASDG-------MWDSVAEA 529
Query: 496 NTVTWSAMIGGYGMQGDGGGSL 517
+ G G++ + G SL
Sbjct: 530 R-----KRLKGSGLKKEPGHSL 546
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 189/550 (34%), Positives = 296/550 (53%), Gaps = 24/550 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
S +L C + + + G+ +H ++K G D F+ +++MYAKC +RQVFDE
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+KN+VSW++MI+GY Q Q + L+++M F+ N+ S+++ACA L A+ G+
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQM---FLVPNEYVFASVISACASLSAVTLGQ 121
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+H LK G E S + +L+ MY+KC DA SVF + VS+ A+I G+ ++
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-N 385
++ L+ F + P+ VL NL G +H ++L L+ I N
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSII---SGLDD---------------NVS 427
++ MY++ ++I +A F EKDVI+WN++I S DD NV
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD T S ++ACA L ++ G +HA+ + L ++ VG AL+N YAKCG A
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQ-DLGVGNALVNMYAKCGCIGYAYD 360
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F M N V+W+ +I G+G G G ++ LF M ++P+ V F +L+AC+H G+
Sbjct: 361 IFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGL 420
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V +G F SM + P ++H+ C++D+L RAGRL EA E+M P D + + L
Sbjct: 421 VDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLL 480
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
L+ +GE + K +L+L P YVL+SNLYASDG W V + R+ +K GL K
Sbjct: 481 SASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKK 540
Query: 668 SPGCSLVDLD 677
PG SL++++
Sbjct: 541 EPGHSLIEVN 550
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 201/420 (47%), Gaps = 27/420 (6%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+LL C T +L+ + HA ++ G +D + +++MY GH +AR VFD M
Sbjct: 8 SLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEK 67
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ MI Y + ++ Y M E +VF+ V+ AC L + G K+H
Sbjct: 68 NLVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNE---YVFASVISACASLSAVTLGQKIH 124
Query: 170 CEIVKVGGPD-SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+K G SFV L+ MY KC + VF T + N VS+ ++I G+V+N +
Sbjct: 125 SRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLE 184
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
GL F MR+ + ++ ++ C L +G LH +K+ ++ + ++
Sbjct: 185 RGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVII 244
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNH 347
MY + I++A F + D++SW +I + K L++F + + P+
Sbjct: 245 TMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDD 304
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFET 406
T S L+A A L +++ G+ +H+ +R L +D V NALV+MYAKC I A IF
Sbjct: 305 FTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSK 364
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
++++WN+II+G ++ + PD+VT + +++AC G V G
Sbjct: 365 MVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKG 424
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 207/442 (46%), Gaps = 41/442 (9%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ L+SMY A SVF + P P+ S+ +I + N + +EF+K MR++
Sbjct: 139 SNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGL 198
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D F F VL C ++ G ++HC+ VK+ F+ ++ MY++ I + +
Sbjct: 199 IPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEK 258
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLR 260
F +K+V+SW ++IA D +GL +F M E V + T S + ACA L
Sbjct: 259 AFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLA 318
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
++ GK +H ++++ + + + AL++MY KCG I A +F ++ +LVSW +I
Sbjct: 319 SMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIA 378
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIR 375
G+ G ++A++LF + P+ VT +L+A G ++ G+ M + GI
Sbjct: 379 GFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIA 438
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVS 435
+E ++ L+DM + + +A + WN D V LVS
Sbjct: 439 PDIEHFS---CLIDMLGRAGRLNEAEEYM-----RKFPFWN------------DPVVLVS 478
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
++SA G V +G L + K ++++ YV L N YA G ++D++ E
Sbjct: 479 LLSASRLHGDVVIGERLAKWLLKLQPVTTSPYV--LLSNLYASDG-------MWDSVAEA 529
Query: 496 NTVTWSAMIGGYGMQGDGGGSL 517
+ G G++ + G SL
Sbjct: 530 RK-----RLKGSGLKKEPGHSL 546
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 201/620 (32%), Positives = 317/620 (51%), Gaps = 29/620 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
L+ MY G A+ +FD MP + S+ +I Y Y +++ +K R
Sbjct: 58 NNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLR 117
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIV--KVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
D F FS L C D+ G +H I +GGP + L+DMY KC I +R
Sbjct: 118 LDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGP-VLLTNSLIDMYCKCGRIDWARL 176
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK--L 259
VF+ + + VSW S+IAGYV+ E L L +M + N LGS + AC
Sbjct: 177 VFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFS 236
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
++ GK LHG +K+G++++ + TALLD Y K G++ DA +F + ++V + AMI
Sbjct: 237 SSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMI 296
Query: 320 VGYTQ-----SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
G+ Q + ++A+ LF + + P+ T +S+L A + + G+ +H+
Sbjct: 297 AGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIF 356
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------- 425
+ L+ D + NALV++Y+ I D F +T + DV++W S+I G N
Sbjct: 357 KYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLT 416
Query: 426 ---------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
PD T+ ++SACA+L AV+ G +HAY+ K G+ + + + + + Y
Sbjct: 417 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTI-IQNSQICMY 475
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCGD SA M F + + V+WS MI G ++ LF M + PN + F
Sbjct: 476 AKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFL 535
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L ACSH G+V EG + F M +D P++KH C+VDLL RAGRL EA F+ +
Sbjct: 536 GVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGF 595
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
E D ++ + L C ++ D G+ + ++++EL P+ A YVL+ N+Y G + ++
Sbjct: 596 EGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEI 655
Query: 657 RELMKQRGLSKSPGCSLVDL 676
R LMK RG+ K PG S +++
Sbjct: 656 RNLMKDRGVKKEPGLSWIEV 675
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 142/525 (27%), Positives = 239/525 (45%), Gaps = 60/525 (11%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+ ++K+++ + G H ++K P F+L L+ MY KC + ++++F
Sbjct: 18 DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D +NVVSW S+I+GY Q E + LF R + ++ T + ++ C + L
Sbjct: 78 DRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLR 137
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H I G+ L +L+DMY KCG I AR VF+ +D VSW ++I GY
Sbjct: 138 LGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYV 197
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSA--SAQLGNLNMGRMVHSLGIRLGLE-D 380
+ G D+ L+L N + S L A S ++ G+M+H ++LGL+ D
Sbjct: 198 RIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLD 257
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------------ 422
V AL+D YAK + DA IF+ + +V+ +N++I+G
Sbjct: 258 VVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLF 317
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ P T S++ AC+++ A + G +HA K L S+ ++G AL+ Y+
Sbjct: 318 FEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYN-LQSDEFIGNALVELYSL 376
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
G + F + + + V+W+++I G+ G G L LF ++L +P+E + +
Sbjct: 377 SGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIM 436
Query: 539 LSACSHTGMVGEGWK---------------------CFYSMCRD-------FKFV--PSM 568
LSAC++ V G + C Y+ C D FK P +
Sbjct: 437 LSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDI 496
Query: 569 KHYVCMVDLLARAGRLEEAL---EFMENMPIEPDVSLFGAFLHGC 610
+ M+ A+ G +EA+ E M+ I P+ F L C
Sbjct: 497 VSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 541
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 290/526 (55%), Gaps = 50/526 (9%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF + N + W +M+ GY + L L+ M + N T L+ +CAK +A
Sbjct: 22 VFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKA 81
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVK---------------------------- 293
+G+ +HG++LK+G E + ++ T+L+ MY +
Sbjct: 82 FEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITG 141
Query: 294 ---CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
GNIR A+ +FDE+ D+VSW AMI GY ++G +AL+LF + + P+ T+
Sbjct: 142 YASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTM 201
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSE 409
+VLSA AQ ++ +GR VHS G + ++NAL+D+Y+KC + A +FE S
Sbjct: 202 VTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSC 261
Query: 410 KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
KDV++WN++I G L SP+ VT+VS++ ACA LGA+ +G +
Sbjct: 262 KDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWI 321
Query: 453 HAYSTKQGLLSSNV-YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
H Y K+ +N + T+L++ YAKCGD ++A VF++M K+ +W+AMI G+ M G
Sbjct: 322 HVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 381
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
LFS M ++P+++ F +LSACSH+G + G F SM +D+ P ++HY
Sbjct: 382 RANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHY 441
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CM+DLL +G +EA E ++ MP+EPD ++ + L C + +L E + ++++ P
Sbjct: 442 GCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEP 501
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ YVL+SN+YA+ G W V +VR L+ +G+ K PGCS +++D
Sbjct: 502 ENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEID 547
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 205/436 (47%), Gaps = 30/436 (6%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
+L+ + G L+ H + + T L++ Y S G+++ A+ +FD +P D S
Sbjct: 106 SLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVS 165
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ MI Y YK+ +E +K M K D VL AC + R ++ G +VH I
Sbjct: 166 WNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWID 225
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
G G + ++ L+D+Y+KC + ++ +F+ K+VVSW ++I GY + +E L+
Sbjct: 226 DHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALL 285
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS--HLVTALLDM 290
LF M N +T+ S++ ACA L A+ G+W+H YI K ++ + L T+L+DM
Sbjct: 286 LFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDM 345
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KCG+I A VF+ + L SW AMI G+ G + LF+ + P+ +T
Sbjct: 346 YAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITF 405
Query: 351 ASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFE 405
+LSA + G L++GR M I LE Y ++D+ + +A+ + +
Sbjct: 406 VGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHY---GCMIDLLGHSGLFKEAKEMIK 462
Query: 406 TTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
T + PD V S++ AC G +++ S K +
Sbjct: 463 TMP-----------------MEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENPG 505
Query: 466 VYVGTALLNFYAKCGD 481
YV L N YA G+
Sbjct: 506 SYV--LLSNIYATAGE 519
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 186/398 (46%), Gaps = 62/398 (15%)
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A SVF + + + W M+ GY S P ALKL+ PN T +L + A+
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE--------- 409
G+ +H ++LG E D V +L+ MYA+ + DA +F+ +S
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 410 ----------------------KDVIAWNSIISG-----------------LDDNVSPDA 430
KDV++WN++ISG + NV PD
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
T+V+V+SACA +V++G +H++ G SN+ + AL++ Y+KCG ++A +F+
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHG-FGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
+ K+ V+W+ +IGGY +L LF +ML PN+V +IL AC+H G +
Sbjct: 258 GLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDI 317
Query: 551 G-WKCFY--SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
G W Y +D PS++ ++D+ A+ G +E A + +M + +S + A +
Sbjct: 318 GRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNAMI 374
Query: 608 HGCGLYSR----FDLGEVMIKKMLELHPDKACYYVLVS 641
G ++ R FDL M K +E PD + L+S
Sbjct: 375 FGFAMHGRANAGFDLFSRMRKNGIE--PDDITFVGLLS 410
>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Brachypodium distachyon]
Length = 805
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/653 (32%), Positives = 316/653 (48%), Gaps = 67/653 (10%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + +L + H L + GL N L+ MY G V+ A +FD M +P
Sbjct: 145 SVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASP 204
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE--------LRD 161
+ SF M+ D + + M + D S VL +C + +R
Sbjct: 205 NEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRA 264
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
G +H IV+ G G D V L+DMY KC + + +VFD + + VSW +I G
Sbjct: 265 FRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITG 324
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
+ Q + L + N M E E N++T +++ +C K R
Sbjct: 325 FGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKAR-------------------- 364
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
++ AR++FD++ + +W ++ GY Q ++LF +
Sbjct: 365 ---------------DVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQH 409
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
+ P+ T+A +LS+ ++LG L++G VHS +R L D V + LVDMY+KC I
Sbjct: 410 QNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGI 469
Query: 400 ARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACAS 442
AR IF +E+DV+ WNS+ISGL + + P + S+I++CA
Sbjct: 470 ARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCAR 529
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L +V G +HA K G NVYVG+AL++ YAKCG+ AR+ FD M KN V W+
Sbjct: 530 LSSVPQGRQIHAQIVKDGY-DQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNE 588
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI GY G G ++ LF ML E +P+ V F +L+ CSH+G+V E F SM +
Sbjct: 589 MIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTY 648
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P +HY C++D L RAGRL E ++NMP + D ++ L C ++ +LGE
Sbjct: 649 GITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECA 708
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
K + L P YVL+SN+YAS GR + VR LM RG+ K G S +D
Sbjct: 709 AKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWID 761
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 148/579 (25%), Positives = 278/579 (48%), Gaps = 71/579 (12%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + AR++ D MP+ + S+ +I ++ + +E Y+ M + +F + VL
Sbjct: 88 GDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVL 147
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
AC + +D+G + H VKVG ++ FV L+ MY KC + + ++FD N V
Sbjct: 148 SACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEV 207
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK--------LRALHQ 264
S+T+M+ G VQ + L LF RM V + + + S++ +CA+ +RA
Sbjct: 208 SFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRL 267
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H I++ G + H+ +L+DMY KC + +A VFD L +I VSW +I G+ Q
Sbjct: 268 GQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQ 327
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+G KAL++ + + PN VT +++L++
Sbjct: 328 AGSYAKALEVLNLMEESGSEPNEVTYSNMLASC--------------------------- 360
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVS 427
K + AR +F+ S V WN+++SG NV
Sbjct: 361 -------IKARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQ 413
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD TL ++S+C+ LG + +G+ +H+ S + LL ++++V + L++ Y+KCG AR+
Sbjct: 414 PDRTTLAVILSSCSRLGILDLGTQVHSASVRF-LLHNDMFVASGLVDMYSKCGQIGIARI 472
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F+ M E++ V W++MI G + + F M + P E + +++++C+
Sbjct: 473 IFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSS 532
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V +G + + +D + ++ ++D+ A+ G +++A F + M + ++ + +
Sbjct: 533 VPQGRQIHAQIVKD-GYDQNVYVGSALIDMYAKCGNMDDARVFFDCM-VTKNIVAWNEMI 590
Query: 608 HGCGLYSRFDLGEVMI---KKML--ELHPDKACYYVLVS 641
HG Y++ GE + + ML E PD + +++
Sbjct: 591 HG---YAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLT 626
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 141/497 (28%), Positives = 241/497 (48%), Gaps = 38/497 (7%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
P+++ + + D+ ++R + DE D+NVVSW ++IA +++ A E L L+ M
Sbjct: 72 PNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGM 131
Query: 238 -REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
REG V TL S+++AC + AL G+ HG +K+G++ N + ALL MY KCG
Sbjct: 132 LREGLVP-THFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGG 190
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ DA +FD + S + VS+TAM+ G Q+G D AL+LF + + V ++SVL +
Sbjct: 191 VEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGS 250
Query: 357 SAQ--------LGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
AQ + +G+ +H+L +R G D V N+L+DMY KC + +A +F++
Sbjct: 251 CAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSL 310
Query: 408 SEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
++WN +I+G S A L ++ S T +L+S +
Sbjct: 311 PNISTVSWNILITGFGQ--------AGSYAKALEVLNLMEESGSEPNEVTYSNMLASCI- 361
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
K D SAR +FD + + TW+ ++ GY + ++ LF M ++
Sbjct: 362 ----------KARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQN 411
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
VQP+ ILS+CS G++ G + + R F M +VD+ ++ G++ A
Sbjct: 412 VQPDRTTLAVILSSCSRLGILDLGTQVHSASVR-FLLHNDMFVASGLVDMYSKCGQIGIA 470
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVSNLYA 645
+ N E DV + + + G ++S + K+M + P ++ Y +++
Sbjct: 471 -RIIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMIN---- 525
Query: 646 SDGRWIRVNQVRELMKQ 662
S R V Q R++ Q
Sbjct: 526 SCARLSSVPQGRQIHAQ 542
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 56/271 (20%)
Query: 380 DYTVINALVDMYAKCHVIAD-------------------------------ARYIFETTS 408
D +IN LV++Y+ + D AR + +
Sbjct: 42 DTFLINRLVELYSVSGLPCDALRAFRSLPRPNAYSYNAALSAARRAGDLDAARALLDEMP 101
Query: 409 EKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSS 451
+++V++WN++I+ L + + P TL SV+SAC ++ A+ G
Sbjct: 102 DRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRR 161
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
H + K G L N++V ALL Y KCG + A +FD M N V+++AM+GG G
Sbjct: 162 CHGLAVKVG-LDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAG 220
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM----VGEGWK---CFYSMCRDFKF 564
+L LF+ M V+ + V +++L +C+ V ++ C +++ F
Sbjct: 221 SVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGF 280
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
++D+ + +++EA++ +++P
Sbjct: 281 GSDQHVGNSLIDMYTKCMQMDEAVKVFDSLP 311
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/613 (31%), Positives = 314/613 (51%), Gaps = 20/613 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+++Y FG K A VF M D +F +I + + ++ + M+ D
Sbjct: 185 LIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPD 244
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
+ +L AC + D+ +G ++H ++K G ++ G L+D+Y KC DI ++ +F+
Sbjct: 245 CVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN 304
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
NVV W M+ Y Q + +F +M+ + N+ T ++ C +
Sbjct: 305 LGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIEL 364
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +K G E + ++ L+DMY K + AR + + L D+VSWT+MI GY Q
Sbjct: 365 GEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQ 424
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+ ++AL F + + +P+++ +AS SA A + + G +H+ G D ++
Sbjct: 425 HDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISI 484
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
N LV++YA+C +A +F KD I WN +ISG +
Sbjct: 485 WNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGA 544
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ T +S ISA A+L ++ G +H + K G +S V AL++ Y KCG + A+
Sbjct: 545 KYNVFTFISAISALANLADIKQGKQVHGRAVKTGH-TSETEVANALISLYGKCGSIEDAK 603
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
M+F M +N V+W+ +I G G +L LF M E ++PN+V F +L+ACSH G
Sbjct: 604 MIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVG 663
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG F SM + P HY C+VD+L RAG+L+ A F++ MPI + ++
Sbjct: 664 LVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTL 723
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ ++GE+ K +LEL P + YVL+SN YA G+W +QVR++MK RG+
Sbjct: 724 LSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIR 783
Query: 667 KSPGCSLVDLDIA 679
K PG S +++ A
Sbjct: 784 KEPGRSWIEVKNA 796
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 163/599 (27%), Positives = 279/599 (46%), Gaps = 28/599 (4%)
Query: 42 ASFH-SLPSIPCLNLLGLCKSTGS----LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGH 95
AS H +L S L C+ G+ + HA +V GL D+ L+ +Y G
Sbjct: 34 ASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGL 93
Query: 96 VKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKA 155
V AR VF + + D S+ M+ Y L K+ Y M +V S VL A
Sbjct: 94 VWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSA 153
Query: 156 CCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSW 214
C + + +G +H ++ K ++FV L+ +Y + +VF + L + V++
Sbjct: 154 CTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTF 213
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
++I+G+ Q + L +F+ M+ + + +T+ SL+ ACA + L +GK LH Y+LK
Sbjct: 214 NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLK 273
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
G+ + +LLD+YVKCG+I A +F+ ++V W M+V Y Q K+ ++
Sbjct: 274 AGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEI 333
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
F + PN T +L G + +G +HSL I+ G E D V L+DMY+K
Sbjct: 334 FGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSK 393
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
+ AR I E ++DV++W S+I+G D V PD + L S
Sbjct: 394 YRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASA 453
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
SACA + A++ G +HA G ++++ + L+N YA+CG ++ A +F + K+
Sbjct: 454 ASACAGIKAMRQGLQIHARVYVSG-YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKD 512
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
+TW+ +I G+G +L +F M + N F + +SA ++ + +G K +
Sbjct: 513 EITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQG-KQVH 571
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+ ++ L + G +E+A M + +VS + + C + R
Sbjct: 572 GRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHGR 629
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 241/480 (50%), Gaps = 22/480 (4%)
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+++H V G G D + L+D+YAK + +RQVF E ++ VSW +M++GY Q
Sbjct: 63 LEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQR 122
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+E L+++M V L S+++AC K + QG+ +H + K + +
Sbjct: 123 GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG 182
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+ +Y+ G+ + A VF ++ D V++ +I G+ Q G+ + AL++F + + +
Sbjct: 183 NALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLR 242
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
P+ VT+AS+L+A A +G+L G+ +HS ++ G+ DY +L+D+Y KC I A I
Sbjct: 243 PDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 404 FETTSEKDVIAWNSI------ISGLDDN-----------VSPDAVTLVSVISACASLGAV 446
F +V+ WN + IS L + + P+ T ++ C G +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++G +H+ S K G S++YV L++ Y+K AR + + + +++ V+W++MI G
Sbjct: 363 ELGEQIHSLSIKNG-FESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAG 421
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
Y +LA F +M + V P+ + + SAC+ + +G + ++ +
Sbjct: 422 YVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQ-IHARVYVSGYAA 480
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
+ + +V+L AR GR EEA + + +++ G + G G ++ ++ KM
Sbjct: 481 DISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNG-LISGFGQSRLYEQALMVFMKM 539
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 311/564 (55%), Gaps = 54/564 (9%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVD---MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H +++K G ++ + L+ L++ + + + VF+ + N++ W +M G+
Sbjct: 21 IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ + L+ M + N T L+ +CAKL+ +G+ +HG++LK+G E++ ++
Sbjct: 81 SSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYV 140
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF-------- 335
T+L+ MYVK G +DA VFD D+VS+TA+I GY GY + A K+F
Sbjct: 141 HTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDV 200
Query: 336 --------------TDKKWADFF---------PNHVTIASVLSASAQLGNLNMGRMVHSL 372
+K+ D F P+ T+ +V+SA AQ G++ +GR VHS
Sbjct: 201 VSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSW 260
Query: 373 GIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
GL + ++NAL+D+Y+KC + A +F+ S KDVI+WN++I G
Sbjct: 261 IDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEA 320
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALL 473
L +P+ VT++S++ ACA LGA+ G +H Y K+ +N + T+L+
Sbjct: 321 LLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLI 380
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ YAKCGD ++A VF++M + +AMI G+ M G + +FS M ++P+++
Sbjct: 381 DMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +LSACSH+GM+ G + F SM +++K P ++HY CM+DLL G +EA E +
Sbjct: 441 TFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINT 500
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M +EPD ++ + L C ++ +LGE +K++++ P+ YVL+SN+YA+ GRW V
Sbjct: 501 MTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEV 560
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+R L+ +G+ K PGCS +++D
Sbjct: 561 ANIRALLNDKGMKKVPGCSSIEID 584
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 167/596 (28%), Positives = 278/596 (46%), Gaps = 100/596 (16%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTN-DKCNTKLVS---MYGSFGHVKYARSVFDSM 106
P L+LL CK+ SL+ HA +I GL N + ++L+ + +F + YA SVF+++
Sbjct: 4 PSLSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETI 63
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P+ + M R + L+ ++ Y CM +++ F +LK+C +L+ EG
Sbjct: 64 QEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQ 123
Query: 167 KVHCEIVKVGGP-DSFVLTGLVDMYAKC---------------RD--------------- 195
++H ++K+G D +V T L+ MY K RD
Sbjct: 124 QIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRG 183
Query: 196 -IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
I S++++FDE K+VVSW ++I+GY +E L LF M + V+ ++ T+ ++V+
Sbjct: 184 YIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVS 243
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
ACA+ ++ G+ +H +I G+ N +V AL+D+Y KCG + A +F L + D++S
Sbjct: 244 ACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVIS 303
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH---S 371
W MI GYT +AL LF + + PN VT+ S+L A AQLG ++ GR +H
Sbjct: 304 WNTMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYID 363
Query: 372 LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
I+ ++ +L+DMYAKC I A +F + + + A N++I G
Sbjct: 364 KRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAA 423
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+ + PD +T V ++SAC+ G + +G
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG------------------------- 458
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF---SDMLNE-EVQP 530
R +F +M + +T + YG D G L LF +M+N ++P
Sbjct: 459 -----------RRIFRSMTQNYKIT--PKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEP 505
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
+ VI+ ++L AC G V G + + P YV + ++ A AGR E
Sbjct: 506 DGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPG--SYVLLSNIYATAGRWNE 559
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 211/657 (32%), Positives = 339/657 (51%), Gaps = 28/657 (4%)
Query: 47 LPSIPCLNLLGLC----KSTGSLKAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARS 101
+ S L+LL C KS +K H ++ GL D K L+++Y + AR
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 102 VFDSMP-NPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCEL 159
VF++ D Y + ++ Y N ++ D +E F + + + D+F F V+KA L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 160 RDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
G +H +VK G D V + LV MYAK +S QVFDE +++V SW ++I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
+ + Q+ A++ L LF RM E N ++L ++AC++L L +GK +H +K G E
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
++ ++ +AL+DMY KC + AR VF ++ LV+W +MI GY G +++
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVI 397
P+ T+ S+L A ++ NL G+ +H IR + +N +L+D+Y KC
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 398 ADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISAC 440
A +F T + +WN +IS + V PD VT SV+ AC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
+ L A++ G +H S + L ++ + +ALL+ Y+KCG+ + A +F+++ +K+ V+W
Sbjct: 421 SQLAALEKGKQIH-LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSW 479
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
+ MI YG G +L F +M ++P+ V +LSAC H G++ EG K F M
Sbjct: 480 TVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD-VSLFGAFLHGCGLYSRFDLG 619
+ P ++HY CM+D+L RAGRL EA E ++ P D L C L+ LG
Sbjct: 540 KYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLG 599
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ + + ++E +PD A Y+++ NLYAS W +VR MK+ GL K PGCS +++
Sbjct: 600 DRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEM 656
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 204/629 (32%), Positives = 332/629 (52%), Gaps = 27/629 (4%)
Query: 68 FHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA + G L + LV+ Y + GH AR VFD MP D S+ ++ + N +
Sbjct: 98 LHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKM 157
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG- 185
+ D + M + + V+ AC ++ G+ VH ++K G DS V G
Sbjct: 158 FDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTG-LDSIVNLGN 216
Query: 186 -LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE-GFVE 243
LVDMY K + +S +VF+ ++N VSW S I ++ + L LF M E GF+
Sbjct: 217 ALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMP 276
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
G+ ITL SL+ A +L G+ +HGY +K +E++ + +L+DMY K G++ A +V
Sbjct: 277 GS-ITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAV 335
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+++ ++VSW AMI Q+G +A L + PN +T+ ++L A +++ +L
Sbjct: 336 FEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASL 395
Query: 364 NMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
G+ +H+ IR GL D + NAL+DMYAKC + A+ IF+ SEKD +++N++I G
Sbjct: 396 KTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILGY 454
Query: 423 DDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+ + DA++ + ++AC +L + + G +H ++ LLS++
Sbjct: 455 SQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRR-LLSNH 513
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
++ LL Y K G +A +F+ ++EK+ +W+ MI GYGM G + LF M +
Sbjct: 514 PFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKD 573
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
V + V + +LS CSH G+V G K F M P HY CMVDLL R+G+L
Sbjct: 574 HGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQ-NLEPQQMHYACMVDLLGRSGQLT 632
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
E++E + +MP + ++GA L C ++ +L + + EL P+ + YY ++ N+YA
Sbjct: 633 ESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHSGYYSVLRNMYA 692
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
GRW +++R LMK R + K+P S V
Sbjct: 693 EAGRWNEAHKIRTLMKSRKVQKNPAYSWV 721
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 131/508 (25%), Positives = 214/508 (42%), Gaps = 75/508 (14%)
Query: 190 YAKCRDIGSSRQV-FDETLD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
YA D+ SSR + F L ++ W S+ E L+++N M V +
Sbjct: 16 YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75
Query: 248 TLGSLVTACAKLRALH--QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T + A A H +G LH L+ G + L+ Y CG+ DAR VFD
Sbjct: 76 TFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFD 135
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA--QLGNL 363
E+ + D+VSW +++ + + D A + + N ++ SV+ A Q G
Sbjct: 136 EMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGF 195
Query: 364 NMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSII--- 419
+G VH L ++ GL+ + NALVDMY K + + +FE E++ ++WNS I
Sbjct: 196 GLG--VHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCF 253
Query: 420 --SGLDDNV------------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+GL +V P ++TL S++ A LG +G +H YS K+ + +
Sbjct: 254 LNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRA-MELD 312
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
++V +L++ YAK G + A VF+ + +N V+W+AMI G + L M
Sbjct: 313 IFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQK 372
Query: 526 EEVQPNEVIFTTILSACSH-----TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
+ PN + +L ACS TG W + D F+ + ++D+ A+
Sbjct: 373 DGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDL-FISN-----ALIDMYAK 426
Query: 581 AGRLE------------------------------EALEFMENMP---IEPDVSLFGAFL 607
G+L E+L + + IE D F L
Sbjct: 427 CGQLRLAQSIFDLSEKDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGAL 486
Query: 608 HGCGLYSRFDLGE----VMIKKMLELHP 631
C S F G+ V+++++L HP
Sbjct: 487 TACTNLSSFKQGKEIHGVLVRRLLSNHP 514
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/593 (33%), Positives = 313/593 (52%), Gaps = 90/593 (15%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
YK M DN+ + +++AC R E +VH ++K+G D +V L++ ++
Sbjct: 200 LYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFS 259
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
C ++ + +VF+E+ + VSW S++AGY++ +E ++++M E +
Sbjct: 260 VCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI--------- 310
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
I NS +V ++ G + +A +FDE+ D
Sbjct: 311 -------------------------IASNSMIV-----LFGMRGLVVEACKLFDEMLEKD 340
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+V+W+A+I + Q+ ++A++ F + V S LSA A L +NMG+++HS
Sbjct: 341 MVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHS 400
Query: 372 LGIRLGLEDY-TVINALVDMYAKC-------------------------------HVIAD 399
L +++G E Y + NAL+ MY+KC +++ +
Sbjct: 401 LSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDN 460
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACAS 442
A+ IF++ EKDV++W+S+ISG N PD TLVSVISACA
Sbjct: 461 AKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACAR 520
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L A++ G +HAY + GL + NV +GT L++ Y KCG ++A VF M EK TW+A
Sbjct: 521 LAALEQGKWVHAYIKRNGL-TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNA 579
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
+I G M G SL +FS+M V PNE+ F +L AC H G+V EG FYSM D
Sbjct: 580 LILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDH 639
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
K P++KHY CMVDLL RAG+L+EA E + MP+ PDV+ +GA L C + ++G +
Sbjct: 640 KIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 699
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+K++EL PD ++VL+SN+YAS G+W V ++R +M + + K PGCS+++
Sbjct: 700 GRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIE 752
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 197/459 (42%), Gaps = 89/459 (19%)
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
Y+Q + L+ M ++ + T L+ AC+ R+ + K +H ++LK+G +
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ ++ L++ + C N+ DA VF+E +D VSW +++ GY + G ++A ++
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQ-- 304
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
P IAS N+++ ++ ++ +
Sbjct: 305 ----MPERSIIAS--------------------------------NSMIVLFGMRGLVVE 328
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACAS 442
A +F+ EKD++ W+++I+ N V D V VS +SACA+
Sbjct: 329 ACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACAN 388
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD--------------------- 481
L V +G +H+ S K G S + + AL+ Y+KCGD
Sbjct: 389 LLVVNMGKLIHSLSLKIG-TESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNS 447
Query: 482 ----------AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
+A+ +FD+M EK+ V+WS+MI GY +LALF +M +P+
Sbjct: 448 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 507
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
E +++SAC+ + +G K ++ + ++ ++D+ + G +E ALE
Sbjct: 508 ETTLVSVISACARLAALEQG-KWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVF 566
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
M IE +S + A + G + + M M + H
Sbjct: 567 YGM-IEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 604
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 132/265 (49%), Gaps = 5/265 (1%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S Y V A+++FDSMP D S+ MI Y NDL+ + + ++ M+ + D
Sbjct: 448 MISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPD 507
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFD 204
V+ AC L +++G VH I + G + +L T L+DMY KC + ++ +VF
Sbjct: 508 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 567
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++K + +W ++I G N + L +F+ M++ V N+IT ++ AC + + +
Sbjct: 568 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 627
Query: 265 GK-WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGY 322
G+ + I I+ N ++D+ + G +++A + + + + D+ +W A++
Sbjct: 628 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 687
Query: 323 TQSGYPDKALKLFTDKKWADFFPNH 347
+ G D + +K + P+H
Sbjct: 688 KKHG--DSEMGRRVGRKLIELQPDH 710
>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
Length = 796
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 203/646 (31%), Positives = 332/646 (51%), Gaps = 31/646 (4%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
+ L C+ S++ H + N ++V YG G V AR FD++ + YS
Sbjct: 32 DALRQCQDLESVRQIHDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYS 91
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ M+ Y N Y+ ++ YK M + + V++ VL AC + ++EG +H I
Sbjct: 92 WGSMLTAYAQNGHYRAALDLYKRMDL---QPNPVVYTTVLGACASIEALEEGKAIHSRIS 148
Query: 174 KVGGP--DSFVLTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIAGYVQNDCAQEG 230
G D + L+ MYAKC + ++++F+ + ++V SW +MIA Y Q+ +E
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+ L+ M VE + T S+++AC+ L L QG+ +H I G E++ L ALL M
Sbjct: 209 IRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTM 265
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y +C + DA +F L D+VSW+AMI + ++ D+A++ ++ + PN+ T
Sbjct: 266 YARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTF 325
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN--ALVDMYAKCHVIADARYIFETTS 408
ASVL A A +G+L GR VH + G + T++N ALVD+Y + +AR +F+
Sbjct: 326 ASVLLACASVGDLRAGRAVHDQILGNGYK-ITLVNGTALVDLYTSYGSLDEARSLFDQIE 384
Query: 409 EKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGS 450
+D W +I G V + VISACASLGA
Sbjct: 385 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADAR 444
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
H+ G++S V + T+L+N Y++ G+ +SAR VFD M ++T+ W+ +I GY
Sbjct: 445 QAHSDIEADGMISDFV-LATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKH 503
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G+ G +L L+ +M E +P+E+ F +L ACSH G+ +G + F S+ D+ P++ H
Sbjct: 504 GEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAH 563
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y C++DLL+RAGRL +A E + MP+EP+ + + L ++ ++ +L
Sbjct: 564 YSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLD 623
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P YVL+SN++A G + VR M RG+ K G S +++
Sbjct: 624 PVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEV 669
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/496 (35%), Positives = 277/496 (55%), Gaps = 26/496 (5%)
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D T + NV ++ ++I+G++ N +EG + +MR V ++ T + AC + +
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI- 155
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
K +HG + K G+E++ + +AL++ Y+K G + A+ F+EL D+V W AM+ GY
Sbjct: 156 --KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YT 382
Q G + L+ F P+ T+ LS A +G+LN GR++H +++G +
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----------------GLDDN 425
V N+L+DMY KC I DA IFE EKD+ +WNSI+S L
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS-----NVYVGTALLNFYAKCG 480
+ PD VT+ +V+ AC+ L A+ G +H Y GL +V + A+++ YAKCG
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ A +VF+ M K+ +W+ MI GYGM G G +L +FS M +++P+EV F +LS
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLS 453
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSH G V +G M + P+++HY C++D+L RAG+L+EA E MPIE +
Sbjct: 454 ACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 513
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++ A L C L+ L EV +++ EL P+ YVL+SN+Y + GR+ V +VR M
Sbjct: 514 VVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTM 573
Query: 661 KQRGLSKSPGCSLVDL 676
+Q+ + K+PGCS ++L
Sbjct: 574 RQQNVRKTPGCSWIEL 589
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 202/421 (47%), Gaps = 29/421 (6%)
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ ++F +I + N ++ EFY+ MR D F F +KAC ++ +I K+H
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEIK---KIH 159
Query: 170 CEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ K G D F+ + LV+ Y K + ++ F+E ++VV W +M+ GY Q +
Sbjct: 160 GLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFE 219
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
L F RM + V ++ T+ ++ A + L+ G+ +HG+ +K+G + + +L+
Sbjct: 220 MVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLI 279
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY KC I DA +F+ + D+ SW +++ + Q G D L+L A P+ V
Sbjct: 280 DMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLV 339
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGL-------EDYTVINALVDMYAKCHVIADAR 401
T+ +VL A + L L GR +H I GL +D + NA++DMYAKC + DA
Sbjct: 340 TVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAH 399
Query: 402 YIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLG 444
+FE S KDV +WN +I G + + PD VT V V+SAC+ G
Sbjct: 400 LVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAG 459
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAM 503
V G + + ++ + T +++ + G A + E N V W A+
Sbjct: 460 FVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRAL 519
Query: 504 I 504
+
Sbjct: 520 L 520
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 8/226 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ L+ MYG ++ A +F+ M D +S+ ++ + + + M
Sbjct: 275 SNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGI 334
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS------FVLTGLVDMYAKCRD 195
+ D + VL AC L + G ++H ++ G G D + ++DMYAKC
Sbjct: 335 QPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGS 394
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+ + VF+ +K+V SW MI GY + E L +F+RM E ++ +++T +++A
Sbjct: 395 MRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSA 454
Query: 256 CAKLRALHQGK-WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
C+ + QG+ +L K + T ++DM + G + +A
Sbjct: 455 CSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEA 500
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 18/168 (10%)
Query: 66 KAFHALLIVDGLTNDK-------CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
+ H +IV GL D ++ MY G ++ A VF+ M N D S+ +MI
Sbjct: 358 REIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMI 417
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG------MKVHCEI 172
Y ++ + +E + M + + D F VL AC + +G MK ++
Sbjct: 418 MGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDV 477
Query: 173 VKVGGPDSFVLTGLVDMYAKCRDIGSSRQV-FDETLDKNVVSWTSMIA 219
P T ++DM + + + ++ ++ N V W +++A
Sbjct: 478 ----APTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 521
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 195/604 (32%), Positives = 320/604 (52%), Gaps = 21/604 (3%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
G + AR +FD M + D S+ +I Y +D Y+ ++ F + D F+ S
Sbjct: 71 GQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVA 130
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
LKAC +I G +H VK G S FV + L+DMY K I +VF++ + +NV
Sbjct: 131 LKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNV 190
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
VSWT++IAG V EGL+ F+ M V + T + A A LH GK +H
Sbjct: 191 VSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQ 250
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
+K G + +S ++ L MY KCG +F+++ D+VSWT +I Y Q G + A
Sbjct: 251 TIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHA 310
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDM 390
++ F + + PN T A+V+S+ A L G +H +RLGL + +V N+++ +
Sbjct: 311 VEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITL 370
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNVSPDAVTL 433
Y+KC ++ A +F + KD+I+W++IIS D + P+ L
Sbjct: 371 YSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFAL 430
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
SV+S C S+ ++ G +HA+ G+ V +A+++ Y+KCG Q A +F+ M+
Sbjct: 431 SSVLSVCGSMALLEQGKQVHAHLLCIGI-DHEAMVHSAIISMYSKCGSVQEASKIFNGMK 489
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+ ++W+AMI GY G ++ LF + + ++P+ V+F +L+AC+H GMV G+
Sbjct: 490 INDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFY 549
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F M ++ PS +HY C++DLL RAGRL EA + +MP D ++ L C ++
Sbjct: 550 YFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVH 609
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
D G +++L+L P+ A ++ ++N+YA+ GRW +R+LMK +G+ K G S
Sbjct: 610 GDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSW 669
Query: 674 VDLD 677
V+++
Sbjct: 670 VNVN 673
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 222/466 (47%), Gaps = 21/466 (4%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H + GL + ++ L+ MY G ++ VF+ M + S+ +I
Sbjct: 146 LHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGY 205
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+ + ++ M + +D+ F+ LKA + + G +H + +K G SFV+
Sbjct: 206 NMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINT 265
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L MY KC ++F++ +VVSWT++I+ YVQ + + F RMR+ +V N
Sbjct: 266 LATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPN 325
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T +++++CA L A G+ +HG++L++G+ + +++ +Y KCG ++ A VF
Sbjct: 326 KYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFH 385
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ D++SW+ +I Y+Q GY +A + + PN ++SVLS + L
Sbjct: 386 GITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQ 445
Query: 366 GRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
G+ VH+ + +G++ +++ A++ MY+KC + +A IF D+I+W ++I+G +
Sbjct: 446 GKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAE 505
Query: 425 N-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+ + PD V + V++AC G V +G T +S +
Sbjct: 506 HGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKE 565
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
L++ + G A + +M + V WS ++ + GD
Sbjct: 566 HYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGD 611
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 223/494 (45%), Gaps = 54/494 (10%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
KA H I G NT L +MY G Y +F+ M PD S+ +I Y
Sbjct: 245 KAIHTQTIKQGFDESSFVINT-LATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQ 303
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-V 182
+ VE +K MRK + + F+ V+ +C L G ++H ++++G ++ V
Sbjct: 304 MGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSV 363
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
++ +Y+KC + S+ VF K+++SW+++I+ Y Q A+E + MR
Sbjct: 364 ANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGP 423
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ N+ L S+++ C + L QGK +H ++L IGI+ + + +A++ MY KCG++++A
Sbjct: 424 KPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASK 483
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F+ + D++SWTAMI GY + GY +A+ LF P++V VL+A G
Sbjct: 484 IFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGM 543
Query: 363 LNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWN 416
+++G M + I E Y L+D+ + +++A +I + D + W+
Sbjct: 544 VDLGFYYFMLMTNVYRISPSKEHY---GCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWS 600
Query: 417 SIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT--ALLN 474
++ + AC G V G ++ +Q L GT L N
Sbjct: 601 TL------------------LRACRVHGDVDRGR----WTAEQLLQLDPNSAGTHITLAN 638
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN-----EEVQ 529
YA G + A + M+ K G+ + G S +D LN ++
Sbjct: 639 IYAAKGRWKEAAHIRKLMKSK------------GVIKERGWSWVNVNDQLNAFVAGDQAH 686
Query: 530 PNEVIFTTILSACS 543
P TT+L S
Sbjct: 687 PQSEHITTVLKLLS 700
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 162/365 (44%), Gaps = 30/365 (8%)
Query: 245 NQITLGSLVTACAKL--RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N+ L T C +L + + + + Y + +E+NS L VK G + AR
Sbjct: 24 NRYILTGTATECRELIQQPIQEQPAENAYSVHNMLELNSEL-----KQLVKQGQLCKARY 78
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP--NHVTIASVLSASAQL 360
+FD++ D +SWT +I GY + +AL LF++ W P + I+ L A A
Sbjct: 79 MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSN-MWVHPGPQRDQFMISVALKACALG 137
Query: 361 GNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
N+ G ++H ++ GL V +AL+DMY K I +FE ++V++W +II
Sbjct: 138 VNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAII 197
Query: 420 SGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+GL V D+ T + A A + G ++H + KQG
Sbjct: 198 AGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFD 257
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S+ + T L Y KCG +F+ MR + V+W+ +I Y G+ ++ F
Sbjct: 258 ESSFVINT-LATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKR 316
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M V PN+ F ++S+C++ G + + R V ++ ++ L ++ G
Sbjct: 317 MRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLR-LGLVNALSVANSIITLYSKCG 375
Query: 583 RLEEA 587
L+ A
Sbjct: 376 LLKSA 380
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/622 (30%), Positives = 328/622 (52%), Gaps = 20/622 (3%)
Query: 77 LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC 136
++++ L+S+Y ++ A +F M D S+ M+ LN + +
Sbjct: 208 ISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHE 267
Query: 137 MRK-RLKEHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCR 194
M+ + D+ ++ C EL + EG VH + + G D V L+DMY+KC+
Sbjct: 268 MQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCK 327
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
D+ + VF ++++VSW +MI+GY QN ++E LF ++ + + + + TL +++
Sbjct: 328 DVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILP 387
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLV 313
+C L G+ +H + LK+G N V +L+ MY+ CG++ S+ + + D+V
Sbjct: 388 SCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIV 447
Query: 314 SWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
W ++ G TQ+G+ +ALK F ++ D + V + +V+SA L L G +H L
Sbjct: 448 CWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGL 507
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------ 425
++ +E D V NAL+ MY +C I +AR IF + +++ +WN +IS N
Sbjct: 508 ALKTLMESDIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRA 567
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
P+ +T+V ++SAC LG ++ G +H + + L N +V AL + Y+
Sbjct: 568 LELFCHIEFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRS-RLQGNSFVSAALEDMYS 626
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
CG +A +F + E++ W++MI +G +GG ++ LF +M +P + F +
Sbjct: 627 NCGRLDTAFQIFQSSPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFIS 686
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+LSACSH+G+V EG + +M F +H+VCMVD+L RAGRL EA EF+ MP +
Sbjct: 687 LLSACSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQ 746
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
P+ ++GA L C + +G + + + EL P+ YY+ +SN+Y + GRW ++R
Sbjct: 747 PEPGVWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELR 806
Query: 658 ELMKQRGLSKSPGCSLVDLDIA 679
+++ +GL K SL+D+ +
Sbjct: 807 RIIQDKGLKKPAAYSLIDVGMG 828
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/506 (29%), Positives = 247/506 (48%), Gaps = 63/506 (12%)
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L+ Y++ D SS +FDE L ++V+ W +MI V+N C + LF + V
Sbjct: 11 TSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVG 70
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ TL +V+A + + L QG+ LHG K G+ +S L AL+DMY KCG + + V
Sbjct: 71 LDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECV 130
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F + D++SW +M+ G + YP K+L F ++ ++V++ +SASA LG L
Sbjct: 131 FGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGEL 190
Query: 364 NMGRMVHSLGIRLGLEDY---TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+ G+++H GI+LG +D + N+L+ +Y++C I A +F+ KD+++WN+++
Sbjct: 191 SFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLD 250
Query: 421 GLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
GL N V PD+VT+V +I CA L ++ G ++H + ++ +
Sbjct: 251 GLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRRE-M 309
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ V +L++ Y+KC D + A VF A+ E++ V+W+AMI GY G + LF
Sbjct: 310 GLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQ 369
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMV--GEGWKCF-------------------YSMCRD 561
+L Q + IL +C + + GE C+ Y C D
Sbjct: 370 LLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGD 429
Query: 562 -------FKFVPSMKHYVCMVDLLA---RAGRLEEALEFMENMPIEPD-----VSLFGAF 606
+ V + VC ++A + G EAL+ M +PD V+LF
Sbjct: 430 LVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFNV- 488
Query: 607 LHGCG----LYSRFDLGEVMIKKMLE 628
+ CG L++ L + +K ++E
Sbjct: 489 ISACGNLELLFAGGSLHGLALKTLME 514
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 251/530 (47%), Gaps = 28/530 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+T L++ Y + ++FD + D + MI N + V + +
Sbjct: 10 STSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGV 69
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQ 201
D+ V+ A + ++ +G +H K G DSF+ L+DMYAKC ++ SS
Sbjct: 70 GLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSEC 129
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF ++++SW SM+ G N+ ++ L F +M + + ++L V+A A L
Sbjct: 130 VFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGE 189
Query: 262 LHQGKWLHGYILKIGIEINSH--LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L G+ +HG+ +K+G + SH +L+ +Y +C +I+ A +F E+ D+VSW AM+
Sbjct: 190 LSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAML 249
Query: 320 VGYTQSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLGIR--L 376
G + +A L + + P+ VT+ ++ A+L L GR VH L +R +
Sbjct: 250 DGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREM 309
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAV----- 431
GL D++V N+L+DMY+KC + A ++F+ E+D+++WN++ISG N
Sbjct: 310 GL-DFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFR 368
Query: 432 ------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
TL++++ +C S +Q G S+H + K G ++ + V + +L Y C
Sbjct: 369 QLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLML-MYINC 427
Query: 480 GDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQPNEVIFTT 537
GD + + + + V W+ ++ G G +L F+ M + +V + V
Sbjct: 428 GDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAFNLMRQDPDVCHDSVALFN 487
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
++SAC + ++ G + + ++ ++ + R G +E A
Sbjct: 488 VISACGNLELLFAG-GSLHGLALKTLMESDIRVQNALITMYGRCGEIENA 536
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/526 (34%), Positives = 292/526 (55%), Gaps = 50/526 (9%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF+ + N++ W +M G+ + L L+ M + N T L+ +CAKL+A
Sbjct: 19 VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKC--------------------------- 294
+G +HG++LK+G E++ ++ T+L+ MYV+
Sbjct: 79 SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138
Query: 295 ----GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
G I AR++FDE+ D+VSW AMI GY ++G +AL+LF + + P+ T+
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSE 409
+V+SASA+ G++ +GR VHS G + ++NAL+D Y+KC + A +F S
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258
Query: 410 KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
KDVI+WN +I G L SP+ VT++S++ ACA LGA+ +G +
Sbjct: 259 KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWI 318
Query: 453 HAYSTKQGLLSSNVY-VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
H Y K+ +N + T+L++ Y+KCGD ++A VF++M K+ W+AMI G+ M G
Sbjct: 319 HVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHG 378
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+ +FS M E++P+++ F +LSACSH GM+ G F SM ++K P ++HY
Sbjct: 379 RANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHY 438
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CM+DLL +G +EA E + M +EPD ++ + L C ++ +LGE + + ++ P
Sbjct: 439 GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEP 498
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ YVL+SN+YA+ GRW V ++R L+ +G+ K PGCS +++D
Sbjct: 499 NNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEID 544
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 255/551 (46%), Gaps = 98/551 (17%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
F + YA SVF+++ P+ + M R + L+ ++ Y CM +++ F +
Sbjct: 10 FEGLPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFL 69
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKC---------------RD- 195
LK+C +L+ EG+++H ++K+G D +V T L+ MY + RD
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129
Query: 196 ---------------IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
I S+R +FDE K+VVSW +MI+GYV+ +E L LF M +
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V ++ T+ ++++A A+ ++ G+ +H +I G N +V AL+D Y KCG + A
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F L D++SW +I GYT +AL LF + + PN VT+ S+L A A L
Sbjct: 250 CGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHL 309
Query: 361 GNLNMGRMVHS-LGIRL-GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
G +++GR +H + RL G+ + + + +L+DMY+KC I A +F + K + AWN+
Sbjct: 310 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNA 369
Query: 418 IISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+I G + + PD +T V ++SAC+ G + +G
Sbjct: 370 MIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLG----------- 418
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
R +F +M +T + YG D G LF
Sbjct: 419 -------------------------RHIFRSMTHNYKIT--PKLEHYGCMIDLLGHSGLF 451
Query: 521 SD----MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK-HYVCMV 575
+ + ++P+ VI+ ++L AC G V G K ++ FK P+ YV +
Sbjct: 452 KEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNL---FKIEPNNPGSYVLLS 508
Query: 576 DLLARAGRLEE 586
++ A AGR E
Sbjct: 509 NIYATAGRWNE 519
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/405 (30%), Positives = 193/405 (47%), Gaps = 30/405 (7%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T LV+ Y S G+++ AR++FD +P D S+ MI Y YK+ +E +K M K
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D V+ A I+ G +VH I G G + ++ L+D Y+KC ++ ++ +
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F K+V+SW +I GY + +E L+LF M N +T+ S++ ACA L A+
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312
Query: 263 HQGKWLHGYILK--IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
G+W+H YI K G+ S L T+L+DMY KCG+I A VF+ + L +W AMI
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIF 372
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIR 375
G+ G + A +F+ + + P+ +T +LSA + G L++GR M H+ I
Sbjct: 373 GFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKIT 432
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVS 435
LE Y ++D+ + +A + T + + PD V S
Sbjct: 433 PKLEHY---GCMIDLLGHSGLFKEAEEMISTMT-----------------MEPDGVIWCS 472
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
++ AC G V++G K + YV L N YA G
Sbjct: 473 LLKACKMHGNVELGEKFAQNLFKIEPNNPGSYV--LLSNIYATAG 515
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 3/192 (1%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
+N K L+ Y G ++ A +F + D S+ ++I Y +LYK+ + ++ M
Sbjct: 228 SNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEM 287
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI---VKVGGPDSFVLTGLVDMYAKCR 194
+ + ++ +L AC L ID G +H I +K S + T L+DMY+KC
Sbjct: 288 LRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCG 347
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
DI ++ QVF+ L K++ +W +MI G+ + A +F+RMR+ ++ + IT L++
Sbjct: 348 DIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLS 407
Query: 255 ACAKLRALHQGK 266
AC+ L G+
Sbjct: 408 ACSHAGMLDLGR 419
>gi|225456719|ref|XP_002268090.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 529
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/498 (34%), Positives = 281/498 (56%), Gaps = 19/498 (3%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R++ D+ + +W ++I GY++ + +E ++++N +R+ ++ + TL ++ AC
Sbjct: 32 ARRIADQIDGLDTYTWNTIIRGYLEGNDPEEAILVYNHVRKKGLKVDTYTLVFVIKACGL 91
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ +G+ +HG I K+G E + TALL++Y + +FDE+ DLV W A+
Sbjct: 92 RPVILEGEQIHGQIFKLGFEFEVIIQTALLNLYGLFDEDCGLQQIFDEMPQRDLVMWNAL 151
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I Y P K ++ D ++ PN VT S+LS + L L G+ VH + +
Sbjct: 152 IAAYAHGNCPYKVREVSYDMVRSNVKPNGVTAVSILSVCSSLRALREGKAVHGYVTKNLI 211
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
E D V NAL+ +Y+KC I DA +F+ ++V++W S+I+G DN
Sbjct: 212 EFDVFVHNALIVVYSKCGSIRDAVQVFQLMPMRNVVSWTSLINGYSDNNCPNEALGFFKQ 271
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ PD +T++ V+ C+ L + ++G + Y K GLL + + AL++ +AKCG
Sbjct: 272 MEAENIRPDEITVLGVVCMCSKLRSFELGEWISQYVVKIGLLKESPAIANALMDMHAKCG 331
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ A +FD M EK V+W+ MI G M G G +L F M E +P+ ++F ++LS
Sbjct: 332 NINRACQIFDGMEEKTIVSWTIMIQGLAMHGHGLSALVRFCQMQREGFKPDSLVFLSLLS 391
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSH G+V EGW+CF SM D+ P M+HY CMVD+L RAG ++EA +F++NMPI+PD+
Sbjct: 392 ACSHAGLVDEGWRCFSSMEADYHISPWMEHYGCMVDILCRAGLVDEAFKFVQNMPIKPDM 451
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++ L C L ++ + EL P K+ YVL+SNL+AS+ W V +VR+ M
Sbjct: 452 IVWRTLLGACHTQGNISLANQVMNYLCELGPKKSEDYVLLSNLFASNAEWDNVGEVRKEM 511
Query: 661 KQRGLSKS-PGCSLVDLD 677
RG++K PGCS ++ D
Sbjct: 512 GDRGVTKQDPGCSFIEAD 529
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/510 (26%), Positives = 255/510 (50%), Gaps = 35/510 (6%)
Query: 72 LIVDG-LTNDKCNTKLVSMYGSF---GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
+I +G L N +KLV + S G AR + D + D Y++ +IR Y +
Sbjct: 1 MITNGHLHNPTLASKLVVSFASITLPGTTSVARRIADQIDGLDTYTWNTIIRGYLEGNDP 60
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGL 186
++ + Y +RK+ + D + V+KAC I EG ++H +I K+G + + T L
Sbjct: 61 EEAILVYNHVRKKGLKVDTYTLVFVIKACGLRPVILEGEQIHGQIFKLGFEFEVIIQTAL 120
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+++Y + +Q+FDE +++V W ++IA Y +C + + M V+ N
Sbjct: 121 LNLYGLFDEDCGLQQIFDEMPQRDLVMWNALIAAYAHGNCPYKVREVSYDMVRSNVKPNG 180
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+T S+++ C+ LRAL +GK +HGY+ K IE + + AL+ +Y KCG+IRDA VF
Sbjct: 181 VTAVSILSVCSSLRALREGKAVHGYVTKNLIEFDVFVHNALIVVYSKCGSIRDAVQVFQL 240
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ ++VSWT++I GY+ + P++AL F + + P+ +T+ V+ ++L + +G
Sbjct: 241 MPMRNVVSWTSLINGYSDNNCPNEALGFFKQMEAENIRPDEITVLGVVCMCSKLRSFELG 300
Query: 367 RMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
+ +++GL E + NAL+DM+AKC I A IF+ EK +++W +I GL
Sbjct: 301 EWISQYVVKIGLLKESPAIANALMDMHAKCGNINRACQIFDGMEEKTIVSWTIMIQGLAM 360
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+ PD++ +S++SAC+ G V G + +S +
Sbjct: 361 HGHGLSALVRFCQMQREGFKPDSLVFLSLLSACSHAGLVDEGWRCFSSMEADYHISPWME 420
Query: 468 VGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+++ + G A + V + + + + W ++G QG+ ++L + ++N
Sbjct: 421 HYGCMVDILCRAGLVDEAFKFVQNMPIKPDMIVWRTLLGACHTQGN----ISLANQVMNY 476
Query: 527 --EVQPNE----VIFTTILSACSHTGMVGE 550
E+ P + V+ + + ++ + VGE
Sbjct: 477 LCELGPKKSEDYVLLSNLFASNAEWDNVGE 506
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/609 (32%), Positives = 328/609 (53%), Gaps = 24/609 (3%)
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
+++ +FD P ++ + ND K+ + + +R+ D S VLK C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
L D G +VHC+ +K G D V T LVDMY K + +VFDE KNVVSWTS
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
++AGY QN ++ L LF++M+ ++ N T +++ A A+ +G +H ++K G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
++ + ++++MY K + DA++VFD + + + VSW +MI G+ +G +A +LF
Sbjct: 224 LDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFY 283
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ A+V+ A + ++ + +H I+ G + D + AL+ Y+KC
Sbjct: 284 RMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCS 343
Query: 396 VIADARYIF-ETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSV 436
I DA +F ++V++W +IISG ++ V P+ T SV
Sbjct: 344 EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSV 403
Query: 437 ISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
++ACA+ A V+ G H+ S K G S+ + V +AL+ YAK G+ +SA VF ++
Sbjct: 404 LNACAAPTASVEQGKQFHSCSIKSGF-SNALCVSSALVTMYAKRGNIESANEVFKRQVDR 462
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
+ V+W++MI GY G G SL +F +M ++ ++ + + F ++SAC+H G+V EG + F
Sbjct: 463 DLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYF 522
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
M +D+ VP+M+HY CMVDL +RAG LE+A++ + MP +++ L C ++
Sbjct: 523 DLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLN 582
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
LGE+ +K++ L P + YVL+SN+YA+ G W +VR+LM + + K G S ++
Sbjct: 583 VQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIE 642
Query: 676 LDIANDFSF 684
+ FSF
Sbjct: 643 VK-NKTFSF 650
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 222/451 (49%), Gaps = 25/451 (5%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H I G D T LV MY V+ VFD M + S+ ++ Y N
Sbjct: 112 KQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQN 171
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT 184
L + ++ + M+ + + F F+ VL +++G++VH ++K G DS +
Sbjct: 172 GLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIK-SGLDSTIFV 230
Query: 185 G--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
G +V+MY+K + ++ VFD ++N VSW SMIAG+V N E LF RMR V
Sbjct: 231 GNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGV 290
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ Q +++ CA ++ + K LH ++K G + + ++ TAL+ Y KC I DA
Sbjct: 291 KLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFK 350
Query: 303 VFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSA-SAQ 359
+F + + ++VSWTA+I GY Q+G D+A+ LF ++ PN T +SVL+A +A
Sbjct: 351 LFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAP 410
Query: 360 LGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
++ G+ HS I+ G + V +ALV MYAK I A +F+ ++D+++WNS+
Sbjct: 411 TASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSM 470
Query: 419 ISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
ISG N+ D +T + VISAC G V G K
Sbjct: 471 ISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYH 530
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ + + +++ Y++ G + A + + M
Sbjct: 531 IVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 561
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 303/547 (55%), Gaps = 28/547 (5%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
+L C +++ G+ +H +K G D V ++++Y+KC ++ +R++FDE D+N
Sbjct: 9 LLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRN 68
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
+VSW+++I+GY Q L LF++MR + N+ S+++ACA L AL QG +H
Sbjct: 69 LVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQVHA 125
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
LK+G S + AL+ MY+KCG DA V + + + VS+ A+I G+ ++ P+K
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVD 389
++ F + F P+ T + +L + G +H I+L LED I N ++
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIIT 245
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL---DDN---------------VSPDAV 431
MY+K ++I +A +F EKD+I+WN++++ D+ V PD
Sbjct: 246 MYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDF 305
Query: 432 TLVSVISACASLGAVQVGSSLHAY--STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T V++ACA L +++ G +H + T+Q +V V AL+N YAKCG +++ VF
Sbjct: 306 TFAGVLAACAGLASIRHGKQIHGHLIRTRQ---YQDVGVSNALVNMYAKCGSIKNSYDVF 362
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
++N V+W+ +I +G G G +L F M + P+ V F +L+AC+H G+V
Sbjct: 363 RRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVE 422
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG F SM + P+++H+ C++DLL RAGRL+EA E+ME +P D + G+ L
Sbjct: 423 EGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSA 482
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C L+ +GE + ++L+L P YVL+SNLYASD W V + +++K GL K P
Sbjct: 483 CRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEP 542
Query: 670 GCSLVDL 676
G SL+D+
Sbjct: 543 GHSLIDV 549
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 242/511 (47%), Gaps = 27/511 (5%)
Query: 67 AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+ HA + G+ +D + ++++Y G+V +AR +FD M + + S+ +I Y
Sbjct: 24 SLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTG 83
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLT 184
+ + MR E +VF+ V+ AC L + +G++VH + +K+G SFV
Sbjct: 84 QPLLALNLFSQMRIVPNE---YVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSN 140
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ MY KC + V + + N VS+ ++IAG+V+N ++G+ F MR+
Sbjct: 141 ALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAP 200
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
++ T L+ C +G LH ++K+ +E ++ + ++ MY K I +A VF
Sbjct: 201 DRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVF 260
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNL 363
+ DL+SW ++ ++AL++F D F P+ T A VL+A A L ++
Sbjct: 261 GLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASI 320
Query: 364 NMGRMVHSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
G+ +H IR +D V NALV+MYAKC I ++ +F TS++++++WN+II+
Sbjct: 321 RHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAF 380
Query: 423 DDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
++ + PD+VT V +++AC G V+ G + + N
Sbjct: 381 GNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPN 440
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDG--GGSLALFSD 522
+ + L++ + G Q A + + + + +++ + GD G LA
Sbjct: 441 IEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLL 500
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
L V+ + + ++ G V E WK
Sbjct: 501 KLQPVTTSPYVLLSNLYASDEMWGGVAEAWK 531
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 214/477 (44%), Gaps = 63/477 (13%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
+GSL+ CAK++A G LH LK G+ + + ++++Y KCGN+ AR +FDE+
Sbjct: 5 AIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEM 64
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
+LVSW+A+I GY Q+G P AL LF+ + PN ASV+SA A L L+ G
Sbjct: 65 SDRNLVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGL 121
Query: 368 MVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN- 425
VH+ ++LG + + NAL+ MY KC + DA + SE + +++N++I+G +N
Sbjct: 122 QVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQ 181
Query: 426 ----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
+PD T ++ C S G LH K L S ++G
Sbjct: 182 QPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDS-AFIG 240
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EV 528
++ Y+K + A VF ++EK+ ++W+ ++ D +L +F DML+ V
Sbjct: 241 NVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFV 300
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKC---------------------FYSMCRDFKFV-- 565
+P++ F +L+AC+ + G + Y+ C K
Sbjct: 301 KPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYD 360
Query: 566 ----PSMKHYVCMVDLLARAG------RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
S ++ V ++A G R E E M+ + I PD F L C
Sbjct: 361 VFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGL 420
Query: 616 FDLGEVMIKKMLE---LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
+ G+V M E + P+ + L+ L GR R+ + E M++ P
Sbjct: 421 VEEGQVYFNSMEEAYGIFPNIEHFSCLIDLL----GRAGRLQEAEEYMEKLPFGHDP 473
>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
Length = 1260
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 304/569 (53%), Gaps = 21/569 (3%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
++ M++ E +NF F V KAC L D+ VH ++K D FV T VDM+
Sbjct: 645 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 704
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC + + +VF+ +++ +W +M++G+ Q+ + LF MR + + +T+ +
Sbjct: 705 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 764
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ + + ++L + +H +++G+++ + + Y KCG++ A+ VF+ + D
Sbjct: 765 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 824
Query: 312 --LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW +M Y+ G A L+ +F P+ T ++ ++ L GR++
Sbjct: 825 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 884
Query: 370 HSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------L 422
HS I LG +D IN + MY+K AR +F+ + + ++W +ISG +
Sbjct: 885 HSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 944
Query: 423 DDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
D+ ++ PD VTL+S+IS C G+++ G + A + G NV + A
Sbjct: 945 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA 1004
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ Y+KCG AR +FD EK VTW+ MI GY + G +L LFS M++ + +PN
Sbjct: 1005 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 1064
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
+ F +L AC+H+G + +GW+ F+ M + + P + HY CMVDLL R G+LEEALE +
Sbjct: 1065 HITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELI 1124
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
NM +PD ++GA L+ C ++ + E + + L P A YV ++N+YA+ G W
Sbjct: 1125 RNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD 1184
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDLDIAN 680
++R +MKQR + K PG S++ ++ N
Sbjct: 1185 GFARIRSIMKQRNIKKYPGESVIQVNGKN 1213
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 214/440 (48%), Gaps = 40/440 (9%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+V +W I V + E L+LF M+ G E N T + ACA+L + + +H
Sbjct: 622 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 681
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
+++K + + TA +DM+VKC ++ A VF+ + D +W AM+ G+ QSG+ D
Sbjct: 682 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 741
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
KA LF + + + P+ VT+ +++ +++ +L + +H++GIRLG++ TV N +
Sbjct: 742 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 801
Query: 389 DMYAKCHVIADARYIFETTSEKD--VIAWNSIISG-----------------LDDNVSPD 429
Y KC + A+ +FE D V++WNS+ L + PD
Sbjct: 802 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 861
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T +++ ++C + + G +H+++ G ++ ++ Y+K D SAR++F
Sbjct: 862 LSTFINLAASCQNPETLTQGRLIHSHAIHLG-TDQDIEAINTFISMYSKSEDTCSARLLF 920
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M + V+W+ MI GY +GD +LALF M+ +P+ V +++S C G +
Sbjct: 921 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 980
Query: 550 EG-W----KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS--- 601
G W Y RD + + ++D+ ++ G + EA + +N P + V+
Sbjct: 981 TGKWIDARADIYGCKRDNVMICN-----ALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 1035
Query: 602 ------LFGAFLHGCGLYSR 615
L G FL L+S+
Sbjct: 1036 MIAGYALNGIFLEALKLFSK 1055
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 142/546 (26%), Positives = 237/546 (43%), Gaps = 65/546 (11%)
Query: 63 GSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
G + HA LI +D T V M+ V YA VF+ MP D ++ M+ +
Sbjct: 675 GCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGF 734
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
+ ++ MR D+ ++++ + + +H +++G
Sbjct: 735 CQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 794
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM- 237
V + Y KC D+ S++ VF+ + D+ VVSW SM Y A + L+ M
Sbjct: 795 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 854
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
RE F + + T +L +C L QG+ +H + + +G + + + + MY K +
Sbjct: 855 REEF-KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 913
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
AR +FD + S VSWT MI GY + G D+AL LF + P+ VT+ S++S
Sbjct: 914 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 973
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ G+L G+ + + G + V+ NAL+DMY+KC I +AR IF+ T EK V+ W
Sbjct: 974 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 1033
Query: 416 NSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG-SSLHAYST 457
++I+G +D + P+ +T ++V+ ACA G+++ G H
Sbjct: 1034 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFH---- 1089
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
+ VY + L+ Y S M+ G +G +L
Sbjct: 1090 ----IMKQVYNISPGLDHY------------------------SCMVDLLGRKGKLEEAL 1121
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM-KHYVCMVD 576
L +M +P+ I+ +L+AC V + S+ F P M YV M +
Sbjct: 1122 ELIRNM---SAKPDAGIWGALLNACKIHRNVKIAEQAAESL---FNLEPQMAAPYVEMAN 1175
Query: 577 LLARAG 582
+ A AG
Sbjct: 1176 IYAAAG 1181
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 10/276 (3%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+NL C++ +L + H+ I G D + +SMY AR +FD M +
Sbjct: 866 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 925
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG--M 166
S+ VMI Y + + + M K ++ D ++ C + ++ G +
Sbjct: 926 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 985
Query: 167 KVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+I + + L+DMY+KC I +R +FD T +K VV+WT+MIAGY N
Sbjct: 986 DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGI 1045
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL--V 284
E L LF++M + + N IT +++ ACA +L +G W + +I+K I+ L
Sbjct: 1046 FLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNISPGLDHY 1104
Query: 285 TALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMI 319
+ ++D+ + G + +A + + + D W A++
Sbjct: 1105 SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 1140
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 36 ELDQTFASFHSL------PS-IPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK---C 82
++D+ A FH++ P + L+L+ C GSL K A + G D C
Sbjct: 943 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 1002
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L+ MY G + AR +FD+ P ++ MI Y LN ++ + ++ + M
Sbjct: 1003 NA-LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY 1061
Query: 143 EHDNFVFSKVLKACCELRDIDEG 165
+ ++ F VL+AC +++G
Sbjct: 1062 KPNHITFLAVLQACAHSGSLEKG 1084
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 296/532 (55%), Gaps = 61/532 (11%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF+ + N++ W +M+ G + L ++ RM N T L+ +CAK +
Sbjct: 39 VFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKT 98
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMY---------------------VKC------ 294
+G+ +H ++K+G E++ + T+L+ MY V C
Sbjct: 99 FEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITG 158
Query: 295 ----GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
G++R AR VFD + D+VSW AMI GY ++ ++AL+LF + + P+ T+
Sbjct: 159 YASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTL 218
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-------TVINALVDMYAKCHVIADARYI 403
SVLSA AQ G++ +GR +H+L ++D+ ++NA + +Y+KC + A +
Sbjct: 219 VSVLSACAQSGSIELGREIHTL-----VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGL 273
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
FE S KDV++WN++I G L SP+ VT++SV+ ACA LGA+
Sbjct: 274 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 333
Query: 447 QVGSSLHAYSTKQ-GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+G +H Y K+ +++ + T+L++ YAKCGD ++A VF++M K+ +W+AMI
Sbjct: 334 DIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIF 393
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
G+ M G + LFS M ++P+++ +LSACSH+G++ G F S+ +D+
Sbjct: 394 GFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNIT 453
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P ++HY CM+DLL AG +EA E + MP+EPD ++ + L C ++ +L E +K
Sbjct: 454 PKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQK 513
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
++E+ P+ + YVL+SN+YA+ GRW V ++RE++ +G+ K PGCS +++D
Sbjct: 514 LMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEID 565
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 239/502 (47%), Gaps = 58/502 (11%)
Query: 69 HALLIVDGLTN-DKCNTKLVSM---YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
HA ++ GL N + +KL+ + F + YA SVF++ P+ + M+R +
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVL 183
+E Y M + + F +LK+C + + +EG ++H +++K+G D +
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS--------------------------- 216
T L+ MYA+ + +R+VFD + ++VVS T+
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181
Query: 217 ----MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
MI GYV+N +E L LF M V ++ TL S+++ACA+ ++ G+ +H +
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241
Query: 273 -LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
G + +V A + +Y KCG++ A +F+ L D+VSW +I GYT +A
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIRL-GLEDYTVI-NALV 388
L LF + + PN VT+ SVL A A LG +++GR +H + RL G+ + + + +L+
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAV 431
DMYAKC I A +F + K + +WN++I G + + PD +
Sbjct: 362 DMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDI 421
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
TLV ++SAC+ G + +G + T+ ++ + +++ G + A +
Sbjct: 422 TLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHM 481
Query: 492 MR-EKNTVTWSAMIGGYGMQGD 512
M E + V W +++ M G+
Sbjct: 482 MPMEPDGVIWCSLLKACKMHGN 503
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 115/224 (51%), Gaps = 12/224 (5%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVS----MYGSFGHVKYARSVFDS 105
+++L C +GS+ + H L VD + K+V+ +Y G V+ A +F+
Sbjct: 219 VSVLSACAQSGSIELGREIHTL--VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEG 276
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ D S+ +I Y +LYK+ + ++ M + + ++ VL AC L ID G
Sbjct: 277 LSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 336
Query: 166 MKVHCEI---VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
+H I +K S + T L+DMYAKC DI ++ QVF+ + K++ SW +MI G+
Sbjct: 337 RWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFA 396
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ A LF+RMR+ +E + ITL L++AC+ L G+
Sbjct: 397 MHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGR 440
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 201/634 (31%), Positives = 328/634 (51%), Gaps = 30/634 (4%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L I G T ++S Y G ++ A +F D S+ MI + +
Sbjct: 22 HCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWNTMIAGFVNLGNF 81
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ +EF K M++ D + F +LK + ++ G +VH +VK+G + F + L
Sbjct: 82 ETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKMGYEGNVFAGSAL 141
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMYAKC + + +VF +N V+W ++I+GY Q L + M +EG +
Sbjct: 142 LDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDCME---LEGVE 198
Query: 247 ITLGSLVTACAKLRALHQGKW---LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
I G+ L K +H I+K G+ ++ + A++ Y +CG+I DA V
Sbjct: 199 IDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERV 258
Query: 304 FD-ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
FD + + DLV+W +M+ Y + ++A +LF + + F P+ T SV+SA+ + +
Sbjct: 259 FDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTSVISAAFEGSH 318
Query: 363 LNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHV--IADARYIFETTSEKDVIAWNSII 419
G+ +H L I+ GLE I N+L+ MY K H + +A IFE+ KD ++WNSI+
Sbjct: 319 QGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSIL 378
Query: 420 SGLDDN-VSPDAVTLV----------------SVISACASLGAVQVGSSLHAYSTKQGLL 462
+G + +S DA+ +V+ +C+ L +Q+G +H K G
Sbjct: 379 TGFSQSGLSEDALKFFENMRSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGF- 437
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
N +V ++L+ Y+KCG + AR FDA + +++ W+++I GY G G +L LF
Sbjct: 438 EPNGFVASSLIFMYSKCGVIEDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFL 497
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M + V+ + + F +L+ACSH G+V EGW SM D+ P M+HY CM+DLL RAG
Sbjct: 498 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAG 557
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
RL+EA +E MP EPD ++ L C +L + +LEL P++ C YVL+S+
Sbjct: 558 RLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSS 617
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++ RW ++ LMK+RG+ K PG S +++
Sbjct: 618 MFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEV 651
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 178/366 (48%), Gaps = 23/366 (6%)
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ AL++ H +K G + + ++ Y KCG IR A +F E D VSW
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
MI G+ G + AL+ K F + + S+L A +G + +G+ VHS+ +++
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVGYVEVGQQVHSMMVKM 129
Query: 377 GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------L 422
G E +AL+DMYAKC + DA +F++ + ++ + WN++ISG L
Sbjct: 130 GYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALISGYAQVGDRGTAFWLL 189
Query: 423 D----DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
D + V D T +++ ++ + +HA K G L+S+ V A++ Y++
Sbjct: 190 DCMELEGVEIDDGTFAPLLTLLDDPDLHKLTTQVHAKIVKHG-LASDTTVCNAIITAYSE 248
Query: 479 CGDAQSARMVFD-AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
CG + A VFD A+ ++ VTW++M+ Y + + LF +M +P+ +T+
Sbjct: 249 CGSIEDAERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFEPDIYTYTS 308
Query: 538 ILSACSHTGMVGEGWKCFYSMC--RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
++SA G+G K + + R +F+ + + + + L + + ++EAL E++
Sbjct: 309 VISAAFEGSHQGQG-KSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEALNIFESLE 367
Query: 596 IEPDVS 601
+ VS
Sbjct: 368 NKDHVS 373
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1724
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 184/564 (32%), Positives = 307/564 (54%), Gaps = 21/564 (3%)
Query: 130 IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVD 188
+ E K + D ++ K+L+ C + + +G +H ++ G G D + T L+
Sbjct: 14 LAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLII 73
Query: 189 MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT 248
Y K D+ ++R VFD +++VVSWT+M++GY QN ++ VLF+ MR V+ NQ T
Sbjct: 74 FYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFT 133
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
GS + AC LR L G + G I K N + +AL+D + KCG + DA +F +
Sbjct: 134 YGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMM 193
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
D+VSW AMI GY G+ D + +F P+ T+ SVL ASA+ G L +
Sbjct: 194 ERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQ 253
Query: 369 VHSLGIRLGLEDYTVINAL-VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD--- 424
+H + +LG Y ++ L ++ YAK + A+ + + +KD+ + ++I+G
Sbjct: 254 IHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGI 313
Query: 425 ---------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
N+ D V L S+++ CA+L + +G+ +HA++ K S +V +G
Sbjct: 314 YSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKY-QPSYDVAMG 372
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
AL++ YAK G+ + A+ FD M EKN ++W+++I GY G G +++L+ M ++ +
Sbjct: 373 NALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFK 432
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
PN+V F ++L ACSHTG+ EG +CF +M + P +HY CMVDL AR G LEEA
Sbjct: 433 PNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYN 492
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
+ + I+ + SL+GA L +Y LG+ + + P+ + YV+++++Y++ G
Sbjct: 493 LLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGL 552
Query: 650 WIRVNQVRELMKQRGLSKSPGCSL 673
W ++R+LM++R K+ G S
Sbjct: 553 WDDAWKIRKLMEERSTKKNAGYSF 576
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 177/611 (28%), Positives = 304/611 (49%), Gaps = 21/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+SM+ SF V+ A VFD M D S+ MI Y + L ++ + + MR E +
Sbjct: 988 LISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETN 1047
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ S +L C + ++ G +H +VK+G + + L+ +Y++ + VF
Sbjct: 1048 STTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQ 1107
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+++++SW SM+A YVQ+ +GL + + + N +T S + AC+ L +
Sbjct: 1108 AMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE 1167
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
K +H I+ G + AL+ MY K G + +A+ V + D V+W A+I G+ +
Sbjct: 1168 SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAE 1227
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSA-SAQLGNLNMGRMVHSLGIRLGLE-DYT 382
+ P++A+K + + N++T+ SVL A SA L G +H+ + G E D
Sbjct: 1228 NEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDY 1287
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
V N+L+ MYAKC + + YIF+ K I WN++++ +
Sbjct: 1288 VKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVG 1347
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V+ D + ++A A+L ++ G LH K G S+++V A ++ Y KCG+
Sbjct: 1348 VNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGF-ESDLHVTNAAMDMYGKCGEMHDV 1406
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ ++ ++W+ +I + G + F +ML +P+ V F ++LSAC+H
Sbjct: 1407 LKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHG 1466
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG + SM R+F P ++H VC++DLL R+GRL A F++ MP+ P+ + +
Sbjct: 1467 GLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRS 1526
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ +L + +LEL P YVL SN+ A+ G+W V +R+ M +
Sbjct: 1527 LLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNI 1586
Query: 666 SKSPGCSLVDL 676
K P CS V L
Sbjct: 1587 KKQPACSWVKL 1597
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 173/619 (27%), Positives = 298/619 (48%), Gaps = 38/619 (6%)
Query: 54 NLLGLCKSTGSLK----AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+L+ C +G + H ++ G+ D T LV YGS G V A+ +F+ MP+
Sbjct: 850 SLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPD 909
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ S+ ++ Y + +++ Y+ MR+ + F+ V +C L D G +V
Sbjct: 910 HNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQV 969
Query: 169 HCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
I++ G DS V L+ M++ + + VFD + +++SW +MI+ Y +
Sbjct: 970 LGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLC 1029
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+E L F+ MR E N TL SL++ C+ + L G+ +HG ++K+G++ N + L
Sbjct: 1030 RESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTL 1089
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L +Y + G DA VF + DL+SW +M+ Y Q G LK+ + NH
Sbjct: 1090 LTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNH 1149
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFET 406
VT AS L+A + L ++VH+L I G D+ ++ NALV MY K ++ +A+ + +T
Sbjct: 1150 VTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQT 1209
Query: 407 TSEKDVIAWNSIISGLDDNVSPDA-----------------VTLVSVISAC-ASLGAVQV 448
+ D + WN++I G +N P+ +T+VSV+ AC A ++
Sbjct: 1210 MPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKH 1269
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +HA+ G S + YV +L+ YAKCGD S+ +FD + K+ +TW+AM+
Sbjct: 1270 GMPIHAHIVLTGFESDD-YVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANA 1328
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G G +L +F +M N V ++ F+ L+A ++ ++ EG + + + F +
Sbjct: 1329 HHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQ-LHGLVIKLGFESDL 1387
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVS---LFGAFL-HGCGLYSRFDLGEVMIK 624
+D+ + G + + L+ + +S L AF HGC F
Sbjct: 1388 HVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGC-----FQKARETFH 1442
Query: 625 KMLEL--HPDKACYYVLVS 641
+ML+L PD + L+S
Sbjct: 1443 EMLKLGPKPDHVTFVSLLS 1461
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 265/526 (50%), Gaps = 27/526 (5%)
Query: 45 HSLPSIPCLN-----LLGLCKSTGSL--KAFHALLIVDGLTNDKCNTK-LVSMYGSFGHV 96
H+ I CLN L G + T + KA HA IV + T L++MY FG++
Sbjct: 736 HTDYGIRCLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNI 795
Query: 97 KYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC 156
++AR VFD M + + S+ M+ Y LY++ V + M E + F+ + ++ AC
Sbjct: 796 EHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITAC 855
Query: 157 CELRDI-DEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSW 214
+ DEG +VH +VK G D +V T LV Y + +++++F+E D NVVSW
Sbjct: 856 SRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSW 915
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
TS++ GY + E L ++ RMR+ V GNQ T ++ ++C L G + G+I++
Sbjct: 916 TSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQ 975
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
G E + + +L+ M+ ++ +A VFD + D++SW AMI Y G ++L+
Sbjct: 976 YGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRC 1035
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAK 393
F + N T++S+LS + + NL GR +H L ++LGL+ I N L+ +Y++
Sbjct: 1036 FHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSE 1095
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISG-LDDNVSPDAVT-LVSVISACASLGAVQVGSS 451
DA +F+ +E+D+I+WNS+++ + D D + L ++ + V S+
Sbjct: 1096 AGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASA 1155
Query: 452 LHAYSTKQGLLSSNVY--------------VGTALLNFYAKCGDAQSARMVFDAMREKNT 497
L A S + L+ S + VG AL+ Y K G A+ V M + +
Sbjct: 1156 LAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDR 1215
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
VTW+A+IGG+ + ++ + + + + N + ++L ACS
Sbjct: 1216 VTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 1261
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/529 (28%), Positives = 245/529 (46%), Gaps = 32/529 (6%)
Query: 53 LNLLGLC-----KSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSM 106
L +L LC K G L H LI +G +D NTKL+ Y G V AR+VFD M
Sbjct: 34 LKILQLCIDKKAKKQGHL--IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGM 91
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P S+ M+ Y N ++ + MR + + F + L+AC LR +D G+
Sbjct: 92 PERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGI 151
Query: 167 KVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+V I K ++ FV + LVD ++KC + + +F ++++VVSW +MI GY
Sbjct: 152 QVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQG 211
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A + +F M G + + TLGS++ A A+ L +HG I ++G +
Sbjct: 212 FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTG 271
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG-YPDKALKLFTDKKWADFF 344
L++ Y K G++R A+ + + DL S TA+I GY G Y AL LF + +
Sbjct: 272 LLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIG 331
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
+ V + S+L+ A L + +G +H+ ++ D + NAL+DMYAK I DA+
Sbjct: 332 MDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRA 391
Query: 404 FETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV 446
F+ EK+VI+W S+ISG P+ VT +S++ AC+ G
Sbjct: 392 FDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLT 451
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIG 505
G + + + +++ +A+ G + A + + K N W A++G
Sbjct: 452 AEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILG 511
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQP-NEVIFTTILSACSHTGMVGEGWK 553
+ G S++ N +QP N V + + S S G+ + WK
Sbjct: 512 ASSIYGYMSLGKEAASNLFN--MQPENSVNYVVLASIYSAAGLWDDAWK 558
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 241/453 (53%), Gaps = 32/453 (7%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
F L++MY+K +I +R VFDE +N SW++M++GYV+ +E + LF +M
Sbjct: 780 FQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL 839
Query: 241 FVEGNQITLGSLVTACAKLRAL-HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
VE N + SL+TAC++ + +G +HG+++K GI + ++ TAL+ Y G + +
Sbjct: 840 GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYN 899
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A+ +F+E+ ++VSWT+++VGY+ SG P + L ++ + N T A+V S+
Sbjct: 900 AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGL 959
Query: 360 LGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L + +G V I+ G ED +V N+L+ M++ + +A Y+F+ +E D+I+WN++
Sbjct: 960 LEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAM 1019
Query: 419 ISGLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
IS + ++ TL S++S C+S+ ++ G +H K G
Sbjct: 1020 ISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG- 1078
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
L SNV + LL Y++ G ++ A +VF AM E++ ++W++M+ Y G L + +
Sbjct: 1079 LDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILA 1138
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC-----RDFKFVPSMKHYVCMVD 576
++L N V F + L+ACS+ + E K +++ DF V + +V
Sbjct: 1139 ELLQMGKVMNHVTFASALAACSNPECLIES-KIVHALIIVAGFHDFLIVGN-----ALVT 1192
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+ + G + EA + ++ MP +PD + A + G
Sbjct: 1193 MYGKLGMMMEAKKVLQTMP-QPDRVTWNALIGG 1224
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +LHA+ G ++ ++ L+N Y+K G+ + AR VFD MR +N +WS M+ GY
Sbjct: 762 AGKALHAFCI-VGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGY 820
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG-MVGEGWK 553
G ++ LF M V+PN + ++++ACS +G M EG++
Sbjct: 821 VRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 867
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 301/520 (57%), Gaps = 30/520 (5%)
Query: 183 LTGLV-DMYAKCRDIGS---SRQVFDETLDKNVVSWTSMIAGYVQ-NDCAQEGLVLFNRM 237
LTGL D+ D GS + +FDE ++V++WTSMI GY N ++ V N +
Sbjct: 40 LTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNML 99
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGN 296
R+G V+ N T+ +++ AC L+AL GK +HG +KIG + +S V AL+DMY C +
Sbjct: 100 RDG-VKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCD 158
Query: 297 IRD-ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK--KWADFFPNHVTIASV 353
D AR VF+++ + + VSWT +I GYT L++F + + P +IA
Sbjct: 159 SMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIA-- 216
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDV 412
+SA A +G+ N+G+ VH+ I G E + V+NA++DMY +C ++A+ +F ++KD
Sbjct: 217 VSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDT 276
Query: 413 IAWNSIISGLD----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
I WN++I+G + + SP+ T SVI+ACA+L + G LH
Sbjct: 277 ITWNTLIAGFETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGI 336
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
+GL +N+ + AL++ YAKCG+ + +F MR N V+W++M+ GYG G G +
Sbjct: 337 IHRGL-DNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEA 395
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
+ LF++M+ ++P++++F +LSACSH G+V EG + F M + P Y C+VD
Sbjct: 396 VDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVD 455
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
LL+RAGR++EA E +ENMP +PD S++ A L C Y + + ++ K+LE+ P+KA
Sbjct: 456 LLSRAGRVKEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGT 515
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YVL+SN A++G W +R+LM+ K G S ++L
Sbjct: 516 YVLLSNFSAAEGNWADFASLRKLMRSTKSKKEVGRSWIEL 555
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 227/457 (49%), Gaps = 36/457 (7%)
Query: 76 GLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK 135
GLT D L+ Y G + A ++FD MP+ D ++ MI Y + + +
Sbjct: 42 GLTTD-----LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFT 96
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKC 193
M + + + F S VLKAC L+ + G VH +K+G G +V L+DMYA C
Sbjct: 97 NMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATC 156
Query: 194 RD-IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
D + ++R VF++ KN VSWT++I GY A GL +F +M F+E +++ S
Sbjct: 157 CDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQM---FMEEGELSPFSF 213
Query: 253 ---VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
V+ACA + + + GK +H ++ G E N ++ A+LDMY +C +A+ +F E+
Sbjct: 214 SIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQ 273
Query: 310 IDLVSWTAMIVGY-TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
D ++W +I G+ T Y ++L +F+ F PN T SV++A A L L G+
Sbjct: 274 KDTITWNTLIAGFETLDSY--ESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQ 331
Query: 369 VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------ 421
+H I GL+ + + NAL+DMYAKC +AD+ IF ++++W S++ G
Sbjct: 332 LHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGH 391
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
+ + PD + ++V+SAC+ G V G T ++ + +
Sbjct: 392 GKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYA 451
Query: 471 ALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGG 506
+++ ++ G + A + + M K + W A++G
Sbjct: 452 CVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGA 488
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 164/320 (51%), Gaps = 10/320 (3%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK--CNTKLVSMYGSF-GHVKYARSVFDSMPN 108
+L CKS +L K H L I G + L+ MY + + AR VF+ +
Sbjct: 113 VLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGT 172
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ S+ +I Y + ++ M E F FS + AC + + G +V
Sbjct: 173 KNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQV 232
Query: 169 HCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H ++ G + V+ ++DMY +CR ++Q+F E K+ ++W ++IAG+ D +
Sbjct: 233 HAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLD-S 291
Query: 228 QEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E L +F++M EGF N T S++ ACA L L+ G+ LHG I+ G++ N L A
Sbjct: 292 YESLCIFSQMVSEGF-SPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNA 350
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+DMY KCGN+ D+ +F + +LVSWT+M++GY G+ +A+ LF + + P+
Sbjct: 351 LIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPD 410
Query: 347 HVTIASVLSASAQLGNLNMG 366
+ +VLSA + G ++ G
Sbjct: 411 KIVFMAVLSACSHAGLVDEG 430
>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
Length = 763
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 189/546 (34%), Positives = 292/546 (53%), Gaps = 22/546 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++MYG G +K A+ VFD+MP + S+ +I Y N + +EFY M + D
Sbjct: 104 ILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPD 163
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F F ++KAC L DI G ++H ++K G L+ MY K I + VF
Sbjct: 164 QFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVFS 223
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALH 263
++++SW SMIAG+ Q E L F M +G N+ GS+ +AC+ L
Sbjct: 224 RMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPE 283
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ LHG +K G+ + +L DMY KCG + AR VF ++ DLV+W A+I G+
Sbjct: 284 YGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFA 343
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
G +A+ F+ + P+ +T+ S+L A L G VH ++GL+ D
Sbjct: 344 YGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVP 403
Query: 383 VINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSIISGL--DDNVS------------ 427
V N L+ MYAKC + DA + FE D+++WN+I++ D
Sbjct: 404 VCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCIS 463
Query: 428 ---PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
PD +TL +V+ A A ++++G+ +H Y+ K GL + ++ V L++ YAKCG ++
Sbjct: 464 QHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGL-NCDISVTNGLIDLYAKCGSLKT 522
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR +FD++ + V+WS++I GY G G +L LF M +V+PN V F +L+ACSH
Sbjct: 523 ARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSH 582
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G+V EGW+ + +M ++F VP+ +H CMVDLLARAG L EA F+ M +PD+ ++
Sbjct: 583 VGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWK 642
Query: 605 AFLHGC 610
L C
Sbjct: 643 TLLAAC 648
Score = 233 bits (593), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 261/519 (50%), Gaps = 40/519 (7%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
++ ++ AC LR ++ G K+H ++K PD + +++MY KC + +++VFD
Sbjct: 65 TYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAM 124
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++NVVSWTS+IAGY QN L + +M + V +Q T GS++ AC+ L + G+
Sbjct: 125 PERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGR 184
Query: 267 WLHGYILKIGIEINSHLVT--ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
LH ++LK E +H++ AL+ MY K I DA VF + + DL+SW +MI G++Q
Sbjct: 185 QLHAHVLK--SEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQ 242
Query: 325 SGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYT 382
GY +AL F + + PN SV SA + L GR +H + I+ GL D
Sbjct: 243 LGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVF 302
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
+L DMYAKC +++ AR +F D++AWN+II+G
Sbjct: 303 AGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQG 362
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD +T+ S++ AC S + G +H Y K G L +V V LL YAKC + + A
Sbjct: 363 LIPDEITVRSLLCACTSPSELYQGMQVHGYINKMG-LDLDVPVCNTLLTMYAKCSELRDA 421
Query: 486 RMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
F+ MR + V+W+A++ L M + +P+ + T +L A +
Sbjct: 422 IFFFEEMRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAE 481
Query: 545 TGM--VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
T +G C Y++ S+ + ++DL A+ G L+ A + +++ I PDV
Sbjct: 482 TVSIEIGNQVHC-YALKTGLNCDISVTN--GLIDLYAKCGSLKTARKIFDSV-INPDVVS 537
Query: 603 FGAFLHGCGLYSRFDLGEVMIK-----KMLELHPDKACY 636
+ + + G Y++F GE +K + L++ P+ +
Sbjct: 538 WSSLILG---YAQFGYGEEALKLFKTMRRLDVKPNHVTF 573
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 244/485 (50%), Gaps = 55/485 (11%)
Query: 221 YVQNDCAQEGLVLFNRMREGF-----VEGNQITLGS---LVTACAKLRALHQGKWLHGYI 272
Y+ C Q+ LFN + F G +TL + L++AC+ LR+L G+ +H ++
Sbjct: 33 YITTLCKQK---LFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHM 89
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
LK + L +L+MY KCG+++DA+ VFD + ++VSWT++I GY+Q+G AL
Sbjct: 90 LKSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNAL 149
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMY 391
+ + + P+ T S++ A + LG++ +GR +H+ ++ + + NAL+ MY
Sbjct: 150 EFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMY 209
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVS-PDAVTL 433
K +VI DA +F + +D+I+W S+I+G L V P+
Sbjct: 210 TKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIF 269
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
SV SAC+SL + G LH S K G L +V+ G +L + YAKCG AR+VF +
Sbjct: 270 GSVFSACSSLLQPEYGRQLHGMSIKFG-LGRDVFAGCSLCDMYAKCGLLSCARVVFYQIG 328
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-----HTGMV 548
+ V W+A+I G+ GD ++A FS M ++ + P+E+ ++L AC+ + GM
Sbjct: 329 RPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQ 388
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
G+ M D VP VC ++ + A+ L +A+ F E M D+ + A
Sbjct: 389 VHGY--INKMGLDLD-VP-----VCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAI 440
Query: 607 LHGCGLYSRFD--LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV---NQVRELMK 661
L C + + + G + + + + PD Y+ ++N+ + + + NQV
Sbjct: 441 LTACMHHDQAEEVFGLLKLMCISQHRPD----YITLTNVLGASAETVSIEIGNQVHCYAL 496
Query: 662 QRGLS 666
+ GL+
Sbjct: 497 KTGLN 501
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 182/564 (32%), Positives = 308/564 (54%), Gaps = 54/564 (9%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVD---MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H +++K G ++ + L+ L++ + + + VFD + ++ W +M G+
Sbjct: 21 IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHAL 80
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ L L+ M + N T L+ +CAK A +G+ LHG +LK G +++ ++
Sbjct: 81 SSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYI 140
Query: 284 VTALLDMYVKCGNIRDARSV-------------------------------FDELCSIDL 312
T+L+ MYV+ G + DA+ V FDE+ D+
Sbjct: 141 HTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDV 200
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW A I GY ++G +AL+LF + P+ T+ +VLSA AQ G++ +GR VHS
Sbjct: 201 VSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSW 260
Query: 373 GIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
G + ++NAL+D+Y+KC + A +F+ S KDVI+WN++I G
Sbjct: 261 INDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEA 320
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALL 473
L P+ VT++S++SACA LGA+ +G +H Y K+ +N + T+L+
Sbjct: 321 LLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 380
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ YAKCGD ++A+ VFD+M ++ +W+AMI G+ M G + +FS M ++P+++
Sbjct: 381 DMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +LSACSH+GM+ G F SM RD+K +P ++HY CM+DL +G +EA + +
Sbjct: 441 TFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINT 500
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M +EPD ++ + L C ++ +LGE + ++++ P+ YVL+SN+YA+ RW V
Sbjct: 501 MEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEV 560
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+ R L+ +G+ K PGCS +++D
Sbjct: 561 AKTRALLNDKGMKKVPGCSSIEID 584
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 147/519 (28%), Positives = 256/519 (49%), Gaps = 57/519 (10%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTN-DKCNTKLVS---MYGSFGHVKYARSVFDSM 106
P L+LL CK+ SL+ HA +I GL N + +KL+ + F + YA SVFD++
Sbjct: 4 PSLSLLHXCKTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTI 63
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P + M R + L+ ++ Y CM +++ F +LK+C + EG
Sbjct: 64 QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKC---------------RD--------------- 195
++H +++K G D ++ T L+ MY + RD
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183
Query: 196 -IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
I S+ ++FDE K+VVSW + I+GY + +E L LF +M + V ++ T+ ++++
Sbjct: 184 XIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLS 243
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
ACA+ ++ G+ +H +I G N +V AL+D+Y KCG + A +F L + D++S
Sbjct: 244 ACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVIS 303
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LG 373
W +I GYT +AL LF D + PN VT+ S+LSA A LG +++GR +H +
Sbjct: 304 WNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYID 363
Query: 374 IRL-GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
RL G+ + + + +L+DMYAKC I A+ +F++ + + +WN++I G
Sbjct: 364 KRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAA 423
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+ + PD +T V ++SAC+ G + +G + T+ L + +++
Sbjct: 424 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMID 483
Query: 475 FYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
G + A + + M E + V W +++ M G+
Sbjct: 484 LXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGN 522
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 198/411 (48%), Gaps = 37/411 (9%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L++ Y S G ++ A +FD +P D S+ I Y YK+ +E +K M K
Sbjct: 173 TALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVR 232
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D VL AC + I+ G +VH I G G + ++ L+D+Y+KC ++ ++ +
Sbjct: 233 PDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGL 292
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F +K+V+SW ++I GY + +E L+LF M + N +T+ S+++ACA L A+
Sbjct: 293 FQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAI 352
Query: 263 HQGKWLHGYILK--IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
G+W+H YI K G+ S L T+L+DMY KCG+I A+ VFD + + L SW AMI
Sbjct: 353 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIF 412
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
G+ G + A +F+ + P+ +T +LSA + G L++GR + R D
Sbjct: 413 GFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI----FRSMTRD 468
Query: 381 YTVINAL------VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV 434
Y ++ L +D+ + +A + T + PD V
Sbjct: 469 YKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTME-----------------MEPDGVIWC 511
Query: 435 SVISACASLGAVQVGSS-------LHAYSTKQGLLSSNVYVGTALLNFYAK 478
S++ AC G V++G S + + +L SN+Y N AK
Sbjct: 512 SLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWNEVAK 562
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 207/448 (46%), Gaps = 64/448 (14%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD---ARSVFDEL 307
SL+ C L++L + +H ++K G+ ++ ++ LL+ V + A SVFD +
Sbjct: 7 SLLHXCKTLQSL---RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTI 63
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
L+ W M G+ S P ALKL+ PN T +L + A+ G+
Sbjct: 64 QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQ 123
Query: 368 MVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE----------------- 409
+H ++ G + D + +L+ MY + + DA+ + + +S
Sbjct: 124 QLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRG 183
Query: 410 --------------KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVIS 438
KDV++WN+ ISG + NV PD T+V+V+S
Sbjct: 184 XIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLS 243
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
ACA G++++G +H++ G N+ + AL++ Y+KCG+ ++A +F + K+ +
Sbjct: 244 ACAQSGSIELGRQVHSWINDHG-FGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVI 302
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG-WKCFYS 557
+W+ +IGGY +L LF DML +PN+V +ILSAC+H G + G W Y
Sbjct: 303 SWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYI 362
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR-- 615
R + ++D+ A+ G +E A + ++M + +S + A + G ++ R
Sbjct: 363 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSM-LNRSLSSWNAMIFGFAMHGRAN 421
Query: 616 --FDLGEVMIKKMLELHPDKACYYVLVS 641
FD+ M K +E PD + L+S
Sbjct: 422 AAFDIFSRMRKNGIE--PDDITFVGLLS 447
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 179/503 (35%), Positives = 293/503 (58%), Gaps = 21/503 (4%)
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLV 253
+D+G + +FD + W ++I G+ + Q LV ++R+R V ++ T L+
Sbjct: 52 KDLGYTLLLFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLL 111
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
A +KLR + ++ + +I+K G++ ++ + +L+ + CG + +R +F E D+V
Sbjct: 112 KAFSKLRNENPFQF-YAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVV 170
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
SWTA+I G ++G +AL+ F + + + + VTI SVL A+A L ++ GR VH
Sbjct: 171 SWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFY 230
Query: 374 IRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
+ G + D V +ALVDMY+KC DA +F +++++W ++I+G
Sbjct: 231 VESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEA 290
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+ + + P+ T+ S ++ACA LG++ G LH Y + L N +GTAL++
Sbjct: 291 LKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKL-GLNSKLGTALVD 349
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y+KCG A +VF+ + K+ W+AMI G M+GD SL LFS M+ VQPN V
Sbjct: 350 MYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVT 409
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
F +LSAC+H G+V EG + F M D++ P++ HY CMVDLL RAGRLEEA++F+E+M
Sbjct: 410 FLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESM 469
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
P+EP ++GA GC ++ F+LGE + +++L P + Y+L++NLY+ +W
Sbjct: 470 PMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAA 529
Query: 655 QVRELMKQRGLSKSPGCSLVDLD 677
VR LMK +G+ KSPGCS ++++
Sbjct: 530 NVRRLMKGKGVDKSPGCSWIEVN 552
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 210/438 (47%), Gaps = 34/438 (7%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
F+A ++ GL D LVS + G+V +R +F D S+ +I N
Sbjct: 125 FYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGR 184
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP--DSFVLT 184
+ +E + MR E D VL A LRD+ G VH V+ G D +V +
Sbjct: 185 AVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGS 244
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LVDMY+KC + +VF+E +N+VSW ++IAGYVQ + +E L +F M +E
Sbjct: 245 ALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEP 304
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
NQ T+ S +TACA+L +L QG+WLH Y+ + + +NS L TAL+DMY KCG + +A VF
Sbjct: 305 NQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVF 364
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
++L + D+ WTAMI G G +L LF+ + PN VT VLSA A G ++
Sbjct: 365 EKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVD 424
Query: 365 MGRMVHSLGIRLGLEDYTV------INALVDMYAKCHVIADA-RYIFETTSEKDVIAWNS 417
G + RL + DY + +VD+ + + +A ++I E W +
Sbjct: 425 EGLEL----FRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGA 480
Query: 418 IISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
+ SG C A ++G + + K S Y+ L N Y+
Sbjct: 481 LFSG------------------CMIHKAFELGEHIGNHLIKLQPHHSGRYI--LLANLYS 520
Query: 478 KCGDAQSARMVFDAMREK 495
+C ++A V M+ K
Sbjct: 521 RCQKWEAAANVRRLMKGK 538
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 212/657 (32%), Positives = 341/657 (51%), Gaps = 27/657 (4%)
Query: 47 LPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSV 102
+ S L+LL C +T SL K H ++ GL +D K L+++Y + AR V
Sbjct: 1 MESSKLLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLV 60
Query: 103 FDSMP-NPDFYSFQVMIRWYFLNDLYKDIVEFYK-CMRKRLKEHDNFVFSKVLKACCELR 160
F+++ D Y + ++ Y N ++ D ++ +K + + D+F + V+KA L
Sbjct: 61 FENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALG 120
Query: 161 DIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
G +H +VK G D V + LV MYAK S QVFDE +++V SW ++I+
Sbjct: 121 REFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVIS 180
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
+ Q A++ L LF RM E N +++ ++AC++L L +GK +H LK E+
Sbjct: 181 SFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKYLKKEFEL 240
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ ++ +AL+DMY +C + AR VF ++ LV+W +MI GY G ++L
Sbjct: 241 DEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMI 300
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIA 398
P+ T+ S+L A ++ NL G+ VH IR ++ IN +L+D+Y KC +
Sbjct: 301 IEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVK 360
Query: 399 DARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACA 441
A +F T + V +WN +ISG + V PD VT SV+S C+
Sbjct: 361 LAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCS 420
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
L A++ G +H S + L ++ + +ALL+ Y+KCG+ + A +F+++ +K+ V+W+
Sbjct: 421 QLAALEKGKQIH-LSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWT 479
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
MI YG G +L F +M V+P+ V F +LSAC H G++ EG K F M
Sbjct: 480 VMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLIDEGVKYFSQMRSK 539
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD-VSLFGAFLHGCGLYSRFDLGE 620
+ S++ Y C++D+L RAGRL EA ++ P D L C L+ LG
Sbjct: 540 YGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLFCACCLHRDHLLGY 599
Query: 621 VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ K ++E +PD A Y ++ NLYAS W +VR MK+ G+ K PGCS ++++
Sbjct: 600 TIAKLLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRKKPGCSWIEMN 656
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 192/552 (34%), Positives = 303/552 (54%), Gaps = 54/552 (9%)
Query: 181 FVLTGLV-DMYAKCRDIG-----SSR------QVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
V+TGLV D +A R I SR ++ + N SW I G+ +++ +
Sbjct: 1 MVITGLVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPK 60
Query: 229 EGLVLFNRM-REGFVEG--NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ ++ + +M R G E + T L CA LR G + G++ K+ +E+ SH+
Sbjct: 61 DAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVHN 120
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
A + M+ CG + +AR VFDE DLVSW +I GY + G +KA++++ + P
Sbjct: 121 ASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKP 180
Query: 346 NHVTIASVLSASAQLGNLNMGR----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADAR 401
+ VT+ ++S+ A LG+LN G+ V + G+R+ + + NAL+DM++KC I +AR
Sbjct: 181 DDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTI---PLANALMDMFSKCGDIHEAR 237
Query: 402 YIFET-------------TSEKDVIAWNSIISG-----------------LDDNVSPDAV 431
IF+ EKDV+ WN++I G N PD +
Sbjct: 238 RIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEI 297
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
T++ +SAC+ LGA+ VG +H Y K L S NV +GT+L++ YAKCG+ A VF
Sbjct: 298 TMIHCLSACSQLGALDVGIWIHRYIEKHSL-SLNVALGTSLVDMYAKCGNISEALCVFHG 356
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
++ +N++T++A+IGG + GD +++ F++M++ + P+E+ F +LSAC H GM+ G
Sbjct: 357 IQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTG 416
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCG 611
F M F P +KHY MVDLL RAG LEEA + ME+MP+E D +++GA L GC
Sbjct: 417 RDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCR 476
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 671
++ LGE KK+LEL P + YVL+ +Y W + R +M +RG+ K PGC
Sbjct: 477 MHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGC 536
Query: 672 SLVDLD-IANDF 682
S ++++ I ++F
Sbjct: 537 SSIEVNGIVSEF 548
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 228/467 (48%), Gaps = 62/467 (13%)
Query: 95 HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR---LKEHDNFVFSK 151
++ Y + + NP+ +S+ V IR + ++ KD V YK M +R D+F +
Sbjct: 27 YLNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPV 86
Query: 152 VLKACCELRDIDEG-------MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ K C +LR G K+ E+V S V + M+A C ++ ++R+VFD
Sbjct: 87 LFKVCADLRLNSLGHMILGHVFKLRLELV------SHVHNASIHMFASCGEMENARKVFD 140
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E+ +++VSW +I GY + ++ + ++ M V+ + +T+ LV++CA L L++
Sbjct: 141 ESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNR 200
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-------------CSID 311
GK + Y+ G+ + L AL+DM+ KCG+I +AR +FD L D
Sbjct: 201 GKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKD 260
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH- 370
+V W AMI G Q+ AL LF + + ++ P+ +T+ LSA +QLG L++G +H
Sbjct: 261 VVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHR 320
Query: 371 -------SLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
SL + LG +LVDMYAKC I++A +F ++ + + +II GL
Sbjct: 321 YIEKHSLSLNVALG-------TSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLA 373
Query: 423 ----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
D ++PD +T + ++SAC G +Q G + + L+ +
Sbjct: 374 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQL 433
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGD 512
+ +++ + G + A + ++M E + W A++ G M G+
Sbjct: 434 KHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHGN 480
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 192/551 (34%), Positives = 291/551 (52%), Gaps = 28/551 (5%)
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGP-DSFVLTGLVDMYAKCRDIGSSRQVF 203
+ V S V C L G H +I+K + P SF+ LV+MY+K S++ +
Sbjct: 11 SLVESAVSTQCSRL-----GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLL 65
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
T +++VV+WT++IAG VQN L F+ MR ++ N T A LR+
Sbjct: 66 SLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPL 125
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +H +K G + + + DMY K G +AR +FDE+ ++ +W A +
Sbjct: 126 VGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSV 185
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
G D AL F + + + PN +T + L+A A L +GR +H ++ G E D +
Sbjct: 186 LEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVS 245
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V N L+D Y KCH + + IF S+ + ++W S+I N
Sbjct: 246 VANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEG 305
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ P + SV+SACA L ++VG S+H + K ++ N++VG+AL++ Y KCG + A
Sbjct: 306 IEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVG-NIFVGSALVDMYGKCGSIEDA 364
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML--NEEVQPNEVIFTTILSACS 543
FD M E+N VTW+AMIGGY QG ++ LF +M + V PN V F +LSACS
Sbjct: 365 ERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACS 424
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
G V G + F SM + P +HY C+VDLL RAG +E+A +F++ MPI P VS++
Sbjct: 425 RAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVW 484
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
GA L ++ + +LG+V + EL P + +VL+SN++A+ GRW VR+ MK
Sbjct: 485 GALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDV 544
Query: 664 GLSKSPGCSLV 674
G+ K GCS +
Sbjct: 545 GIKKGAGCSWI 555
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 225/495 (45%), Gaps = 26/495 (5%)
Query: 41 FASFHSLPSIPCLNLLGLCKSTGSLKAFHALLI--VDGLTNDKCNTKLVSMYGSFGHVKY 98
F S +SL S+ + C G +A HA +I +D LV+MY
Sbjct: 3 FLSPNSLASLVESAVSTQCSRLG--RAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNS 60
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A+ + PN ++ +I N + + + MR+ + ++F F KA
Sbjct: 61 AQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS 120
Query: 159 LRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
LR G +VH VK G D FV DMY+K +R++FDE ++N+ +W +
Sbjct: 121 LRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAY 180
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
++ V + L F R E N IT + + ACA L G+ LHG++L+ G
Sbjct: 181 LSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGF 240
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
E + + L+D Y KC + + +F + + VSW +MIV Y Q+ +KA +F
Sbjct: 241 EADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLR 300
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHV 396
+ P ++SVLSA A L L +G+ VH+L ++ + + V +ALVDMY KC
Sbjct: 301 ARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGS 360
Query: 397 IADARYIFETTSEKDVIAWNSIISG-------------LDD------NVSPDAVTLVSVI 437
I DA F+ E++++ WN++I G D+ V+P+ VT V V+
Sbjct: 361 IEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVL 420
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
SAC+ G+V VG + + + +++ + G + A M + T
Sbjct: 421 SACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPT 480
Query: 498 VT-WSAMIGGYGMQG 511
V+ W A++G M G
Sbjct: 481 VSVWGALLGASKMFG 495
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 15/324 (4%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H ++ G D L+ YG V + +F + P+ S+ MI Y N
Sbjct: 229 RQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQN 288
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK---VGGPDSF 181
D + + RK E +F+ S VL AC L ++ G VH VK VG + F
Sbjct: 289 DEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVG--NIF 346
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + LVDMY KC I + + FDE ++N+V+W +MI GY A + LF+ M G
Sbjct: 347 VGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGS 406
Query: 242 --VEGNQITLGSLVTACAKLRALHQGKWLHGYIL-KIGIEINSHLVTALLDMYVKCGNIR 298
V N +T +++AC++ +++ G + + + GIE + ++D+ + G +
Sbjct: 407 HRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVE 466
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP----NHVTIASVL 354
A ++ VS ++G ++ + K+ D + + P NHV ++++
Sbjct: 467 QAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLF-ELDPLDSGNHVLLSNMF 525
Query: 355 SASAQLGNLNMGRM-VHSLGIRLG 377
+A+ + + R + +GI+ G
Sbjct: 526 AAAGRWEEATLVRKEMKDVGIKKG 549
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 175/481 (36%), Positives = 289/481 (60%), Gaps = 24/481 (4%)
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT---ACAKLRALHQGKWLHGYIL 273
MI+G+V+N C ++ + +F M G G + L +++ A A+L+ L G + +
Sbjct: 1 MISGFVKNSCFEDSIRVFGDMVLG--NGPRFDLTTVIAVLPAVAELQELKLGMQILCLAI 58
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K G + L+T L+ ++ KCG + AR +F E+ DL+S AMI G+T +G + +++
Sbjct: 59 KCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVR 118
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYA 392
LF + + + TI ++ + G+ + +H ++LG+ ++ V AL +Y
Sbjct: 119 LFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYC 178
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVS 435
+ + + AR +F+ ++EK + +WN++ISG +NV+P+ VT+ S
Sbjct: 179 RLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTS 238
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
++SACA +GA+ +G +H+ K SNVYV TAL++ YAKCG AR +FD M EK
Sbjct: 239 ILSACAQIGALSLGEWVHSL-IKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEK 297
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
N VTW+AMI GYG+ G G +L LF DML+ V+P + F ++L ACSH G+V EG F
Sbjct: 298 NEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIF 357
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
++M DF F P +HY CMVD+L RAG+L++ALEF++ MP+EP ++GA L C ++
Sbjct: 358 HTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKD 417
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+L V +K+ EL P+ YYVL+SN+Y+ + ++ + VR++ K++ L+K+PGC+L++
Sbjct: 418 TNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIE 477
Query: 676 L 676
+
Sbjct: 478 I 478
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 200/409 (48%), Gaps = 22/409 (5%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
VL A EL+++ GM++ C +K G +LTGL+ +++KC ++ +R +F E K+
Sbjct: 37 VLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKD 96
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
++S +MI+G+ N ++ + LF + + T+ L+ + + +HG
Sbjct: 97 LISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHG 156
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+ +K+GI +S + TAL +Y + + AR +FDE L SW AMI G TQ+G D
Sbjct: 157 FCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDA 216
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
A+ LF + + PN VT+ S+LSA AQ+G L++G VHSL E + V AL+D
Sbjct: 217 AISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALID 276
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVT 432
MYAKC I AR +F+ EK+ + WN++ISG L +V P +T
Sbjct: 277 MYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLT 336
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+SV+ AC+ G V+ G + +++ + G + A AM
Sbjct: 337 FLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAM 396
Query: 493 R-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
E W A++G + D +LA + E+ P + + ++S
Sbjct: 397 PVEPGPPVWGALLGACMIHKD--TNLAHVASEKLFELDPENIGYYVLMS 443
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 165/343 (48%), Gaps = 10/343 (2%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+S++ G V+ AR +F + D S MI + N +D V +K + +
Sbjct: 70 TGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGER 129
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
+ ++ +H VK+G S V T L +Y + ++ +RQ+
Sbjct: 130 VSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQL 189
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FDE+ +K + SW +MI+G QN + LF M++ V N +T+ S+++ACA++ AL
Sbjct: 190 FDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGAL 249
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+W+H I E N ++ TAL+DMY KCG+I AR +FD + + V+W AMI GY
Sbjct: 250 SLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGY 309
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLG 377
G+ +ALKLF D + P +T SVL A + G + G MVH G
Sbjct: 310 GLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPL 369
Query: 378 LEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSII 419
E Y +VD+ + + A +I E W +++
Sbjct: 370 AEHYA---CMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALL 409
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 77 LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC 136
+++ +T L ++Y + +AR +FD S+ MI N L + ++
Sbjct: 164 VSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQT 223
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCR 194
M+K + + +L AC ++ + G VH ++K +S +V T L+DMYAKC
Sbjct: 224 MQKNNVNPNPVTVTSILSACAQIGALSLGEWVH-SLIKSNRFESNVYVSTALIDMYAKCG 282
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
I +R++FD +KN V+W +MI+GY + QE L LF M V+ +T S++
Sbjct: 283 SITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLY 342
Query: 255 ACAKLRALHQGKWL-HGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
AC+ + +G + H + G E + ++D+ + G ++ A
Sbjct: 343 ACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKA 389
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C G+L + H+L+ + +N +T L+ MY G + AR +FD MP
Sbjct: 238 SILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEK 297
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ ++ MI Y L+ ++ ++ + M + F VL AC + EG
Sbjct: 298 NEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEG 353
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 195/611 (31%), Positives = 311/611 (50%), Gaps = 49/611 (8%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
++ LV MYG G ++ AR VFDSM + ++ MI Y N L ++ ++ + MR
Sbjct: 220 SSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGI 279
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
E + L A L + EG + H I+ D+ + + +++ Y+K I +
Sbjct: 280 EPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAEL 339
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF L+K+VV+W +I+ YVQ+ + L + + MR + + +TL S+++A A
Sbjct: 340 VFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSN 399
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+ GK H Y ++ +E + + +++DMY KC I DAR VFD DLV W ++
Sbjct: 400 IKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAA 459
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Y Q G +ALKLF ++ PN ++ SV+ LG L G+
Sbjct: 460 YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVI-----LGFLRNGQ-------------- 500
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DD 424
+N DM+++ + + ++I W ++ISGL +
Sbjct: 501 --VNEAKDMFSQMQSLG---------FQPNLITWTTLISGLAQSGFGYEAILFFQKMQEA 549
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P ++ SV+ AC + ++ G ++H + T+ S V V T+L++ YAKCG
Sbjct: 550 GIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLS-VPVATSLVDMYAKCGSIDE 608
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A+ VF M K ++AMI Y + G +LALF + E ++P+ + FT+ILSACSH
Sbjct: 609 AKKVFHMMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSH 668
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G+V EG F M P M+HY C+V LL+R G L+EAL + MP +PD + G
Sbjct: 669 AGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILG 728
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
+ L C + +LGE + K + +L P + YV +SN YA+ GRW+ V+ +R+LMK RG
Sbjct: 729 SLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRG 788
Query: 665 LSKSPGCSLVD 675
L K+PGCS +
Sbjct: 789 LRKNPGCSWIQ 799
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 150/487 (30%), Positives = 256/487 (52%), Gaps = 26/487 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C R + G ++H I+K G + +V T LV YAKC + ++F
Sbjct: 81 IYGELLQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFH 140
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+NV SW +++ + +++ L+ F M+E V + L +++ AC L+ +
Sbjct: 141 RLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGL 200
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +HGY+LK+G + ++L+DMY KCG + DAR VFD + ++V+W +MIVGY Q
Sbjct: 201 GKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQ 260
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +A+ +F D + P VT+AS LSASA L L G+ H++ I L+ D +
Sbjct: 261 NGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNIL 320
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
+++++ Y+K +I DA +F EKDV+ WN +IS +N+
Sbjct: 321 GSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENL 380
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D+VTL S++SA A +++G H Y ++ L S+V V ++++ YAKC AR
Sbjct: 381 RFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRN-LESDVVVANSIIDMYAKCERIDDAR 439
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD+ E++ V W+ ++ Y G G +L LF M + V PN + + +++ G
Sbjct: 440 KVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNG 499
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLF 603
V E K +S + F P++ + ++ LA++G EA+ F + M I P ++
Sbjct: 500 QVNEA-KDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASI 558
Query: 604 GAFLHGC 610
+ L C
Sbjct: 559 TSVLLAC 565
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 170/595 (28%), Positives = 292/595 (49%), Gaps = 48/595 (8%)
Query: 66 KAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI---- 118
+ HA ++ +G N+ TKLV Y + A +F + + +S+ ++
Sbjct: 99 QQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQC 158
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
R F D +E M++ DNFV VLKAC L+ I G VH ++K+G G
Sbjct: 159 RMGFSEDALLGFIE----MQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFG 214
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
FV + LVDMY KC + +R+VFD ++KNVV+W SMI GYVQN QE + +F M
Sbjct: 215 ACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDM 274
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R +E ++T+ S ++A A L AL +GK H + +++++ L +++++ Y K G I
Sbjct: 275 RVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLI 334
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
DA VF + D+V+W +I Y Q KAL + + + + VT++S+LSAS
Sbjct: 335 EDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSAS 394
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A N+ +G+ H IR LE D V N+++DMYAKC I DAR +F++T+E+D++ WN
Sbjct: 395 AVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWN 454
Query: 417 SIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHA----YSTKQGLLSSNVYVGTAL 472
++++ QVG S A Y + + NV ++
Sbjct: 455 TLLAAY-----------------------AQVGLSGEALKLFYQMQFDSVPPNVISWNSV 491
Query: 473 LNFYAKCGDAQSARMVFDAMR----EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+ + + G A+ +F M+ + N +TW+ +I G G G ++ F M +
Sbjct: 492 ILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGI 551
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+P+ T++L AC+ + G + + +F S+ +VD+ A+ G ++EA
Sbjct: 552 RPSIASITSVLLACTDIPSLWYG-RAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAK 610
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ M ++ ++ A + L+ + + K + + + PD + ++S
Sbjct: 611 KVFHMMS-SKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILS 664
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 318/602 (52%), Gaps = 21/602 (3%)
Query: 95 HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH-DNFVFSKVL 153
H+K AR +FD +P D S+ +I Y + + + + MR + + D F+ S L
Sbjct: 64 HLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGL 123
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
K C + G +H VK G +S FV + L+DMY K +IG S +VFDE +N V
Sbjct: 124 KTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAV 183
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+WT++I G V+ ++ GL F+ M VE + + A A AL+ G+ +H
Sbjct: 184 TWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQT 243
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
LK G + NS + +L MY KCG + F ++ ++D+VSWT ++ Y Q G D L
Sbjct: 244 LKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGL 303
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMY 391
+ F + ++ PN T ++V+S A L G +H+ + +G + +V N+++ +Y
Sbjct: 304 QAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLY 363
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLV 434
+KC +A +F + +D+I W++II+ + P+ L
Sbjct: 364 SKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALA 423
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
SV+S C S+ ++ G LHA+ GL +++ V +AL+ YAKCG A +F +
Sbjct: 424 SVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM-VCSALIIMYAKCGSIAEASKIFMDSWK 482
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
+ ++W+AMI GY G ++ LF ++ ++P+ V F +L+ACSH GMV G+
Sbjct: 483 DDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYY 542
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYS 614
F SM +D+ PS +HY CM+DLL RAGRL +A + +MPI+ D ++ L C ++
Sbjct: 543 FNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602
Query: 615 RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
D G+ ++L+L P+ A ++ ++N++A+ G+W +R LMK +G+ K PG S V
Sbjct: 603 DVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSV 662
Query: 675 DL 676
+
Sbjct: 663 KV 664
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 243/516 (47%), Gaps = 63/516 (12%)
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR---EGFVEGNQIT 248
K + +R +FD+ ++ VSWT++I+GYV + + E L LF++MR E ++ ++
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDEL 307
LG L T L L+ G LHG+ +K G+ +NS V +ALLDMY+K G I + VFDE+
Sbjct: 121 LG-LKTCGLGLNYLY-GTNLHGFSVKTGL-VNSVFVGSALLDMYMKIGEIGRSCKVFDEM 177
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
+ + V+WTA+I G ++GY + L F+ + + A L ASA G LN GR
Sbjct: 178 PTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGR 237
Query: 368 MVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----G 421
+H+ ++ G ++ + V N+L MY KC + + F DV++W +I++ G
Sbjct: 238 SIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMG 297
Query: 422 LDD------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
+D NV P+ T +VIS CA+ ++ G LHA+ G +++ + V
Sbjct: 298 KEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNA-LSVA 356
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
+++ Y+KCG+ S VF +M+ ++ +TWS +I Y G G + S M +E +
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 530 PNEVIFTTILSAC---------------------SHTGMVGEGWKCFYSMCRDFK----- 563
PNE ++LS C T MV Y+ C
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 564 FVPSMK----HYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRF 616
F+ S K + M+ A G +EA+E EN+ + PD F L C
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536
Query: 617 DLGEVMIKKM---LELHPDKACYYVLVSNLYASDGR 649
DLG M + P K Y ++ +L GR
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMI-DLLCRAGR 571
Score = 195 bits (495), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 227/467 (48%), Gaps = 23/467 (4%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H + GL N + L+ MY G + + VFD MP + ++ +I
Sbjct: 138 LHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGY 197
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+ + ++ M + E+D++ ++ LKA + ++ G +H + +K G +SFV
Sbjct: 198 SEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANS 257
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L MY KC + F + +VVSWT+++ Y+Q GL F RMR V N
Sbjct: 258 LTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPN 317
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T ++++ CA L G+ LH ++L +G + +++ +Y KCG + VF
Sbjct: 318 EYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC 377
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ D+++W+ +I Y+Q GY ++A + + + PN +ASVLS + L
Sbjct: 378 SMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ 437
Query: 366 GRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
G+ +H+ + +GLE +++ +AL+ MYAKC IA+A IF + + D+I+W ++ISG
Sbjct: 438 GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAE 497
Query: 422 ---------LDDNVS-----PDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLSSNV 466
L +N+ PD+VT + V++AC+ G V +G ++ S + S
Sbjct: 498 HGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKE 557
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ G +++ + G A + +M + + V WS ++ + GD
Sbjct: 558 HYG-CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGD 603
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 173/421 (41%), Gaps = 61/421 (14%)
Query: 269 HGYILKIGIEINSHLVTAL--------LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
H Y + + +N+H + L + VK +++DAR +FD+L D VSWT +I
Sbjct: 29 HLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIIS 88
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG-NLNMGRMVHSLGIRLGLE 379
GY S +AL+LF+ + + S+ + LG N G +H ++ GL
Sbjct: 89 GYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLV 148
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------------- 422
+ + +AL+DMY K I + +F+ ++ + W ++I+GL
Sbjct: 149 NSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGM 208
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
V D+ + A A GA+ G S+H + K+G N +V +L Y KCG
Sbjct: 209 GRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKG-FDENSFVANSLTTMYNKCGK 267
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
F MR + V+W+ ++ Y G L F M V PNE F+ ++S
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC 327
Query: 542 CSHTGMVGEGWK---------------------CFYSMCRDFKFVP----SMKH-----Y 571
C++ + G + YS C + V SMK +
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387
Query: 572 VCMVDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
++ ++ G EEA E++ M E P+ + L CG + + G+ + +L
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447
Query: 629 L 629
+
Sbjct: 448 V 448
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/627 (30%), Positives = 328/627 (52%), Gaps = 66/627 (10%)
Query: 69 HALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L + G D + L+ MY + + F SMP ++ S+ +I ND
Sbjct: 197 HGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL 256
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ +E +K M+K F+ V ++C L + G ++H +K G D + T
Sbjct: 257 RGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTAT 316
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMY KC ++ ++++F+ + N+ S+ ++I GY ++D +GL L ++
Sbjct: 317 LDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD---KGLGL-----------DE 362
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L ACA ++ +G +HG +K + N + A+LDMY KCG + +A VF+E
Sbjct: 363 VSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE 422
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ S D VSW A+I + Q+G +K L LF
Sbjct: 423 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHN---------------------------- 454
Query: 367 RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
R++ S RLGL+ + I AL+DMY+KC ++ A + + +E+ V++WN+IISG
Sbjct: 455 RIIKS---RLGLDSFVGI-ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQK 510
Query: 422 ------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
L+ V PD T +++ CA+L V++G +HA K+ L S+ Y+
Sbjct: 511 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKE-LQSDAYIS 569
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
+ L++ Y+KCG+ Q +++F+ ++ VTW+AM+ GY G G +L +F M E V+
Sbjct: 570 STLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVK 629
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
PN F +L AC H G+V +G F+SM ++ P ++HY C+VD++ R+G++ +ALE
Sbjct: 630 PNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALE 689
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
+E MP E D ++ L C ++ ++ E +L+L P+ + YVL+SN+YA+ G
Sbjct: 690 LIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGM 749
Query: 650 WIRVNQVRELMKQRGLSKSPGCSLVDL 676
W V ++R++M+ GL K PGCS +++
Sbjct: 750 WNEVTKLRKMMRFNGLKKEPGCSWIEI 776
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 298/611 (48%), Gaps = 75/611 (12%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G + A+ +FD+MP D S+ +I Y N ++ +++ + M + D F
Sbjct: 118 YAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTF 177
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETL 207
+ VLK+C L D G+++H VK+G D V+TG L+DMYAKC+ + S Q F
Sbjct: 178 AVVLKSCSSLEDHGGGIQIHGLAVKMGF-DCDVVTGSALLDMYAKCKKLDCSIQFFHSMP 236
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+KN VSW+++IAG VQND + GL LF M++ V +Q T S+ +CA L AL G
Sbjct: 237 EKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQ 296
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
LHG+ LK + + TA LDMY+KC N+ DA+ +F+ L + +L S+ A+IVGY +S
Sbjct: 297 LHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARS-- 354
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LGLEDYTVINA 386
DK L L + V+++ A A + G VH L ++ L + V NA
Sbjct: 355 -DKGLGL-----------DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANA 402
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAV 446
++DMY KC + +A +FE +D ++WN+II+ + N + + + + +
Sbjct: 403 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHN-------- 454
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++ GL S +VG AL++ Y+KCG + A + D + E+ V+W+A+I G
Sbjct: 455 ------RIIKSRLGLDS---FVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISG 505
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC------------ 554
+ +Q + FS ML V P+ + TIL C++ V G +
Sbjct: 506 FSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSD 565
Query: 555 ---------FYSMC---RDFKFV----PSMKH--YVCMVDLLARAGRLEEALEFMENMPI 596
YS C +DF+ + P+ + MV A+ G EEAL+ E M +
Sbjct: 566 AYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQL 625
Query: 597 E---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE---LHPDKACYYVLVSNLYASDGRW 650
E P+ + F A L CG + G ML L P Y +V + GR
Sbjct: 626 ENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIM----GRS 681
Query: 651 IRVNQVRELMK 661
+V++ EL++
Sbjct: 682 GQVSKALELIE 692
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 135/541 (24%), Positives = 247/541 (45%), Gaps = 44/541 (8%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCR------------ 194
FS + + C + + + G + H ++ P FV L+ MY KC
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 195 -------------------DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
DIG ++++FD +++VVSW S+I+GY+ N ++ + +F
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
+M ++ T ++ +C+ L G +HG +K+G + + +ALLDMY KC
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCK 223
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+ + F + + VSW+A+I G Q+ L+LF + + A + T ASV
Sbjct: 224 KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFR 283
Query: 356 ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
+ A L L +G +H ++ D + A +DMY KC+ ++DA+ +F + ++ +
Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQS 343
Query: 415 WNSIISGL---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+N+II G D + D V+L ACA + G +H S K L SN+ V A
Sbjct: 344 YNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMK-SLCQSNICVANA 402
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF--SDMLNEEVQ 529
+L+ Y KCG A +VF+ M ++ V+W+A+I + G+ +L+LF + ++ +
Sbjct: 403 ILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLG 462
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
+ + ++ S GM+ + K + + V S + L ++ ++
Sbjct: 463 LDSFVGIALIDMYSKCGMMEKAEKLHDRLAE--QTVVSWNAIISGFSLQKQSEEAQKTFS 520
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVSNLYASD 647
M M ++PD + L C +LG+ + +++ EL D LV ++Y+
Sbjct: 521 KMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLV-DMYSKC 579
Query: 648 G 648
G
Sbjct: 580 G 580
Score = 45.4 bits (106), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 80/158 (50%), Gaps = 4/158 (2%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA +I L +D ++ LV MY G+++ + +F+ PN DF ++ M+ Y +
Sbjct: 551 KQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQH 610
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV-- 182
L ++ ++ ++ M+ + ++ F VL+AC + +++G+ ++ G D +
Sbjct: 611 GLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEH 670
Query: 183 LTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIA 219
+ +VD+ + + + ++ + + + V W ++++
Sbjct: 671 YSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 708
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 318/602 (52%), Gaps = 21/602 (3%)
Query: 95 HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH-DNFVFSKVL 153
H+K AR +FD +P D S+ +I Y + + + + MR + + D F+ S L
Sbjct: 64 HLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGL 123
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
K C + G +H VK G +S FV + L+DMY K +IG S +VFDE +N V
Sbjct: 124 KTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAV 183
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+WT++I G V+ ++ GL F+ M VE + + A A AL+ G+ +H
Sbjct: 184 TWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQT 243
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
LK G + NS + +L MY KCG + F ++ ++D+VSWT ++ Y Q G D L
Sbjct: 244 LKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGL 303
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMY 391
+ F + ++ PN T ++V+S A L G +H+ + +G + +V N+++ +Y
Sbjct: 304 QAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLY 363
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLV 434
+KC +A +F + +D+I W++II+ + P+ L
Sbjct: 364 SKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALA 423
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
SV+S C S+ ++ G LHA+ GL +++ V +AL+ YAKCG A +F +
Sbjct: 424 SVLSVCGSMAILEQGKQLHAHVLSVGLEQTSM-VCSALIIMYAKCGSIAEASKIFMDSWK 482
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
+ ++W+AMI GY G ++ LF ++ ++P+ V F +L+ACSH GMV G+
Sbjct: 483 DDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYY 542
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYS 614
F SM +D+ PS +HY CM+DLL RAGRL +A + +MPI+ D ++ L C ++
Sbjct: 543 FNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHG 602
Query: 615 RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
D G+ ++L+L P+ A ++ ++N++A+ G+W +R LMK +G+ K PG S V
Sbjct: 603 DVDCGQRAAAEVLKLDPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSV 662
Query: 675 DL 676
+
Sbjct: 663 KV 664
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 243/516 (47%), Gaps = 63/516 (12%)
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR---EGFVEGNQIT 248
K + +R +FD+ ++ VSWT++I+GYV + + E L LF++MR E ++ ++
Sbjct: 61 KTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLS 120
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDEL 307
LG L T L L+ G LHG+ +K G+ +NS V +ALLDMY+K G I + VFDE+
Sbjct: 121 LG-LKTCGLGLNYLY-GTNLHGFSVKXGL-VNSVFVGSALLDMYMKIGEIGRSCKVFDEM 177
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
+ + V+WTA+I G ++GY + L F+ + + A L ASA G LN GR
Sbjct: 178 PTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGR 237
Query: 368 MVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----G 421
+H+ ++ G ++ + V N+L MY KC + + F DV++W +I++ G
Sbjct: 238 SIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMG 297
Query: 422 LDD------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
+D NV P+ T +VIS CA+ ++ G LHA+ G +++ + V
Sbjct: 298 KEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNA-LSVA 356
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
+++ Y+KCG+ S VF +M+ ++ +TWS +I Y G G + S M +E +
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPK 416
Query: 530 PNEVIFTTILSAC---------------------SHTGMVGEGWKCFYSMCRDFK----- 563
PNE ++LS C T MV Y+ C
Sbjct: 417 PNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKI 476
Query: 564 FVPSMK----HYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRF 616
F+ S K + M+ A G +EA+E EN+ + PD F L C
Sbjct: 477 FMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMV 536
Query: 617 DLGEVMIKKM---LELHPDKACYYVLVSNLYASDGR 649
DLG M + P K Y ++ +L GR
Sbjct: 537 DLGFYYFNSMSKDYHITPSKEHYGCMI-DLLCRAGR 571
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 227/467 (48%), Gaps = 23/467 (4%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H + GL N + L+ MY G + + VFD MP + ++ +I
Sbjct: 138 LHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGY 197
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+ + ++ M + E+D++ ++ LKA + ++ G +H + +K G +SFV
Sbjct: 198 SEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANS 257
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L MY KC + F + +VVSWT+++ Y+Q GL F RMR V N
Sbjct: 258 LTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPN 317
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T ++++ CA L G+ LH ++L +G + +++ +Y KCG + VF
Sbjct: 318 EYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC 377
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ D+++W+ +I Y+Q GY ++A + + + PN +ASVLS + L
Sbjct: 378 SMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ 437
Query: 366 GRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
G+ +H+ + +GLE +++ +AL+ MYAKC IA+A IF + + D+I+W ++ISG
Sbjct: 438 GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAE 497
Query: 422 ---------LDDNVS-----PDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLSSNV 466
L +N+ PD+VT + V++AC+ G V +G ++ S + S
Sbjct: 498 HGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKE 557
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ G +++ + G A + +M + + V WS ++ + GD
Sbjct: 558 HYG-CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGD 603
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 173/421 (41%), Gaps = 61/421 (14%)
Query: 269 HGYILKIGIEINSHLVTAL--------LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
H Y + + +N+H + L + VK +++DAR +FD+L D VSWT +I
Sbjct: 29 HLYTKPLSLTLNAHFSNKVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIIS 88
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG-NLNMGRMVHSLGIRLGLE 379
GY S +AL+LF+ + + S+ + LG N G +H ++ GL
Sbjct: 89 GYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLV 148
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------------- 422
+ + +AL+DMY K I + +F+ ++ + W ++I+GL
Sbjct: 149 NSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGM 208
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
V D+ + A A GA+ G S+H + K+G N +V +L Y KCG
Sbjct: 209 GRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKG-FDENSFVANSLTTMYNKCGK 267
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
F MR + V+W+ ++ Y G L F M V PNE F+ ++S
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISC 327
Query: 542 CSHTGMVGEGWK---------------------CFYSMCRDFKFVP----SMKH-----Y 571
C++ + G + YS C + V SMK +
Sbjct: 328 CANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITW 387
Query: 572 VCMVDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
++ ++ G EEA E++ M E P+ + L CG + + G+ + +L
Sbjct: 388 STIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLS 447
Query: 629 L 629
+
Sbjct: 448 V 448
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 296/530 (55%), Gaps = 17/530 (3%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETL 207
F + KA + DI K+H I + + L L+ YA C + G +R+VFDE
Sbjct: 21 FGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMS 80
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
D+NVV + MI YV N +GL++F M G + T ++ AC+ L G
Sbjct: 81 DRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLL 140
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG +LK+G++ N + L+ MY KCG + +AR VFDE+ D+VSW +M+ GY +
Sbjct: 141 IHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMR 200
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINAL 387
D AL++ + + P+ T+AS++ A A + N+ V + + L ++ N +
Sbjct: 201 FDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENV-LYVEKIFVNLERKNLISWNVM 259
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQ 447
+ +Y K + A ++ + V PDA+T SV+ AC L A+
Sbjct: 260 IRVYMKNSLPTQAVDLYLQMEKC--------------RVEPDAITFASVLPACGDLSALL 305
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G +H Y K+ L N+ + +L++ YA+CG A+ VFD M+ ++ +W+++I Y
Sbjct: 306 LGRRIHEYVEKKKL-CPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAY 364
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GM G G ++ALF++MLN P+ + F ILSACSH+G++ EG F M D++ P
Sbjct: 365 GMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPR 424
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
++HY C+VDLL RAGR++EA ++ MPIEP+ ++ L C +++ D+G + +L
Sbjct: 425 IEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLL 484
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+L P+++ YYVL+SN+YA GRW V ++R +MK++ + K+PG S V+L+
Sbjct: 485 QLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVELN 534
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 235/552 (42%), Gaps = 91/552 (16%)
Query: 64 SLKAFHALLI-VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+LK H ++ ++ N KL+ Y + G R VFD M + + + VMIR Y
Sbjct: 36 TLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYV 95
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N Y D + ++ M DN+ + VLKAC ++ G+ +H +++KVG + F
Sbjct: 96 NNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLF 155
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V GL+ MY KC + +R+VFDE + K+VVSW SM+AGY N + L + M +
Sbjct: 156 VGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYG 215
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T+ SL+ A A + N+
Sbjct: 216 QKPDGCTMASLMPAVANTSS---------------------------------ENVLYVE 242
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+F L +L+SW MI Y ++ P +A+ L+ + P+ +T ASVL A L
Sbjct: 243 KIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLS 302
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L +GR +H + L + + N+L+DMYA+C + DA+ +F+ +DV +W S+IS
Sbjct: 303 ALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLIS 362
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
L+ +PD++ V+++SAC+ G + G T ++
Sbjct: 363 AYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRIT 422
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+ L++ + G A + M
Sbjct: 423 PRIEHYACLVDLLGRAGRVDEAYNIIKQM------------------------------- 451
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK-HYVCMVDLLARAG 582
++PNE ++ T+LS+C + G ++ + P +YV + ++ A+AG
Sbjct: 452 ---PIEPNERVWATLLSSCRVFTNMDIGILAADNL---LQLAPEQSGYYVLLSNIYAKAG 505
Query: 583 RLEEALEFMENM 594
R +E E M
Sbjct: 506 RWKEVTEIRSVM 517
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/552 (33%), Positives = 303/552 (54%), Gaps = 26/552 (4%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+K+L+ C + D+G++VH V +G G D + L+DMY KC + + VFD L
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
++NVVSWT+++ GY+Q A+ L L M V+ N+ T + + AC L + G
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG +K G E S + A +DMY KCG I A VF+++ +LVSW AMI G+T G
Sbjct: 127 IHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGN 186
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE---DYTVI 384
K+L LF + P+ T S L A LG + G +H+ I G +
Sbjct: 187 GRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIA 246
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------LDDNVSP 428
+A+VD+YAKC + +A+ +F+ +K++I+W+++I G L ++VS
Sbjct: 247 SAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSN 306
Query: 429 -DAVTLVSVISACASLGAVQVGSSLHAYSTK--QGLLSSNVYVGTALLNFYAKCGDAQSA 485
D L ++ A L V+ G +H Y K GL ++ V ++++ Y KCG + A
Sbjct: 307 VDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGL---DISVANSIIDMYLKCGLTEEA 363
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+F M+ +N V+W+ MI GYG G G ++ LF+ M + ++ +EV + +LSACSH+
Sbjct: 364 ERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHS 423
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G++ E + F +C + + P+++HY CMVD+L RAG+L+EA +ENM ++P+ ++
Sbjct: 424 GLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQT 483
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ ++G + + + + D YV++SN+YA G W +VR+L+K +GL
Sbjct: 484 LLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGL 543
Query: 666 SKSPGCSLVDLD 677
K G S V+++
Sbjct: 544 KKEAGQSWVEIN 555
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 243/526 (46%), Gaps = 59/526 (11%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L+ MYG V A SVFD M + S+ ++ Y K + M
Sbjct: 42 NNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGV 101
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
+ + F FS LKAC L ++ GM++H VK G S V +DMY+KC IG + Q
Sbjct: 102 KPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQ 161
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF++ +N+VSW +MIAG+ ++ LVLF RM+ ++ T S + AC L A
Sbjct: 162 VFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGA 221
Query: 262 LHQGKWLHGYILKIG--IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ G +H ++ G I I + + +A++D+Y KCG + +A+ VFD + +L+SW+A+I
Sbjct: 222 IRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALI 281
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS--LGIRLG 377
G+ Q G +A+ LF + + + ++ ++ A L + G+ +H L + G
Sbjct: 282 QGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSG 341
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-------------- 423
L D +V N+++DMY KC + +A +F ++V++W +I+G
Sbjct: 342 L-DISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNR 400
Query: 424 ---DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
D + D V ++++SAC+ G ++ + + N+ +++ + G
Sbjct: 401 MQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAG 460
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ A+ + + M+ ++PNE I+ T+LS
Sbjct: 461 QLKEAKNLIENMK----------------------------------LKPNEGIWQTLLS 486
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
AC G + G + + R P +YV M ++ A AG +E
Sbjct: 487 ACRVHGNLEIGREVGEILFRMDTDNPV--NYVMMSNIYAEAGYWKE 530
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 161/350 (46%), Gaps = 50/350 (14%)
Query: 56 LGLCKSTGSLKA---FHALLIVDGLTNDKCN---TKLVSMYGSFGHVKYARSVFDSMPNP 109
L C + G+++ HA LI G N + +V +Y G++ A+ VFD +
Sbjct: 213 LKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQK 272
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ +I+ + + ++ ++ +R+ + D FV S ++ +L +++G ++H
Sbjct: 273 NLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMH 332
Query: 170 CEIVKV-GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
C I+KV G D V ++DMY KC + ++F E +NVVSWT MI GY ++ +
Sbjct: 333 CYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGE 392
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ + LFNRM+ +E +++ +L++AC SH
Sbjct: 393 KAIHLFNRMQLDGIELDEVAYLALLSAC------------------------SH------ 422
Query: 289 DMYVKCGNIRDARSVFDELCS-----IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
G IR+++ F LC+ ++ + M+ ++G +A L + K
Sbjct: 423 -----SGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLK-- 475
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAK 393
PN ++LSA GNL +GR V + R+ ++ + ++YA+
Sbjct: 476 -PNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAE 524
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/526 (33%), Positives = 293/526 (55%), Gaps = 50/526 (9%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF+ + N + W +MI G+ + L L+ M + N T L+ +CAK +
Sbjct: 20 VFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKT 79
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKC--------------------------- 294
+G+ +HG +LK+G +++ ++ T+L+ MYV+
Sbjct: 80 FTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITG 139
Query: 295 ----GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
G+IR A+ +FDE+ D+VSW AMI GY ++G +AL+LF + + P+ T
Sbjct: 140 YASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTY 199
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE 409
+VLSA A G++ +GR VHS G + + ++NAL+D+Y+KC + A +F+ S
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259
Query: 410 KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
KDVI+WN++I G L +P+ VT++SV+ ACA LGA+ +G +
Sbjct: 260 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWI 319
Query: 453 HAYSTKQGLLSSNVY-VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
H Y K+ +N + T+L++ YAKCGD ++A VF++M K+ +W+AMI G+ M G
Sbjct: 320 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 379
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
S LFS M ++P+++ F +LSACSH+GM+ G F SM +D+K P ++HY
Sbjct: 380 RADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHY 439
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CM+DLL +G +EA E + M +EPD ++ + L C ++ +L E + ++++ P
Sbjct: 440 GCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEP 499
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ Y+L+SN+YAS GRW V ++R L+ + + K PGCS +++D
Sbjct: 500 ENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVD 545
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 152/550 (27%), Positives = 256/550 (46%), Gaps = 96/550 (17%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
F + YA SVF+++ P+ + MIR + L+ + Y CM +++ F +
Sbjct: 11 FDGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFL 70
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDM---------------------- 189
LK+C + + EG ++H +++K+G D +V T L+ M
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130
Query: 190 ---------YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
YA DI S++++FDE K+VVSW +MI+GY + C +E L LF M +
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V ++ T ++++ACA ++ G+ +H ++ G + N +V AL+D+Y KCG + A
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F L D++SW +I GYT +AL LF + + PN VT+ SVL A A L
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHL 310
Query: 361 GNLNMGRMVHS-LGIRL-GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
G +++GR +H + RL G+ + + + +L+DMYAKC I A +F + K + +WN+
Sbjct: 311 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 370
Query: 418 IISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+I G + PD +T V ++SAC+ G + +G
Sbjct: 371 MIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLG----------- 419
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
R +F +M + +T + YG D G LF
Sbjct: 420 -------------------------RHIFRSMTQDYKMT--PKLEHYGCMIDLLGHSGLF 452
Query: 521 ---SDMLNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
+M+N E++P+ VI+ ++L AC G V ++ + PS Y+ + +
Sbjct: 453 KEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPS--SYILLSN 510
Query: 577 LLARAGRLEE 586
+ A AGR E+
Sbjct: 511 IYASAGRWED 520
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 191/405 (47%), Gaps = 30/405 (7%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L++ Y S G ++ A+ +FD +P D S+ MI Y YK+ +E ++ M K
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQV 202
D + VL AC I+ G +VH + G + ++ L+D+Y+KC ++ ++ +
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F K+V+SW ++I GY + +E L+LF M N +T+ S++ ACA L A+
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313
Query: 263 HQGKWLHGYILK--IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
G+W+H YI K G+ S L T+L+DMY KCG+I A VF+ + L SW AMI
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIR 375
G+ G D + LF+ + P+ +T +LSA + G L++GR M +
Sbjct: 374 GFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVS 435
LE Y ++D+ + +A + T + PD V S
Sbjct: 434 PKLEHY---GCMIDLLGHSGLFKEAEEMINTM-----------------EMEPDGVIWCS 473
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
++ AC G V++ S K + + Y+ L N YA G
Sbjct: 474 LLKACKMHGNVELAESFAQNLIKIEPENPSSYI--LLSNIYASAG 516
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 112/221 (50%), Gaps = 7/221 (3%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ +L C +GS+ + H+ + G +N K L+ +Y G V+ A +F +
Sbjct: 200 VTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSY 259
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D S+ +I Y +LYK+ + ++ M + + ++ VL AC L ID G +
Sbjct: 260 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWI 319
Query: 169 HCEI---VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
H I +K S + T L+DMYAKC DI ++ QVF+ L K++ SW +MI G+ +
Sbjct: 320 HVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG 379
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
A LF+RMR+ +E + IT L++AC+ L G+
Sbjct: 380 RADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGR 420
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 37/191 (19%)
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A VF+ ++E N + W+ MI G+ + D SL L+ M++ + PN F +L +C+
Sbjct: 17 ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76
Query: 545 TGMVGEGWKCF-------------------------YSMCRDFKFVPSMKH-----YVCM 574
+ EG + + + +K H Y +
Sbjct: 77 SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG---CGLYSR-FDLGEVMIKKMLELH 630
+ A G + A + + +P++ DV + A + G G Y +L E M+K + +
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVK-DVVSWNAMISGYAETGCYKEALELFEEMMK--MNVR 193
Query: 631 PDKACYYVLVS 641
PD++ Y ++S
Sbjct: 194 PDESTYVTVLS 204
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 188/570 (32%), Positives = 310/570 (54%), Gaps = 28/570 (4%)
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
NF +S ++ + + VH ++K G SF+ L+D Y KC + +R++FDE
Sbjct: 2 NF-YSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYSFLGHKLIDGYIKCGSLAEARKLFDE 60
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
+++V+W SMI+ ++ + ++E + + M V + T ++ A ++L + G
Sbjct: 61 LPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHG 120
Query: 266 KWLHGYILKIGIEI-NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ HG + +G+E+ + + +AL+DMY K +RDA VF + D+V +TA+IVGY Q
Sbjct: 121 QRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQ 180
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
G +ALK+F D PN T+A +L LG+L G+++H L ++ GLE
Sbjct: 181 HGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVAS 240
Query: 385 N-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+L+ MY++C++I D+ +F + + W S + GL N +
Sbjct: 241 QTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSI 300
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
SP+ TL S++ AC+SL ++VG +HA + K GL N Y G AL+N Y KCG+ AR
Sbjct: 301 SPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGL-DGNKYAGAALINLYGKCGNMDKAR 359
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD + E + V ++MI Y G G +L LF + N + PN V F +IL AC++ G
Sbjct: 360 SVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAG 419
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG + F S+ + ++ H+ CM+DLL R+ RLEEA +E + PDV L+
Sbjct: 420 LVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVLWRTL 478
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L+ C ++ ++ E ++ K+LEL P ++L++NLYAS G+W +V +++ ++ L
Sbjct: 479 LNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLK 538
Query: 667 KSPGCSLVDLD------IANDFSFSRVVSL 690
KSP S VD+D +A D S R + +
Sbjct: 539 KSPAMSWVDVDREVHTFMAGDLSHPRSLEI 568
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 256/532 (48%), Gaps = 30/532 (5%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
KS +L+A H +I G + KL+ Y G + AR +FD +P+ ++ MI
Sbjct: 15 KSLTTLRAVHTNVIKSGFSYSFLGHKLIDGYIKCGSLAEARKLFDELPSRHIVTWNSMIS 74
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP- 178
+ + K+ VEFY M D + FS + KA +L I G + H V +G
Sbjct: 75 SHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEV 134
Query: 179 -DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FV + LVDMYAK + + VF L+K+VV +T++I GY Q+ E L +F M
Sbjct: 135 LDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDM 194
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
V+ N+ TL ++ C L L G+ +HG ++K G+E T+LL MY +C I
Sbjct: 195 VNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMI 254
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
D+ VF++L + V+WT+ +VG Q+G + A+ +F + PN T++S+L A
Sbjct: 255 EDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQAC 314
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ L L +G +H++ ++LGL+ AL+++Y KC + AR +F+ +E DV+A N
Sbjct: 315 SSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAIN 374
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
S+I N + P+ VT +S++ AC + G V+ G + A
Sbjct: 375 SMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNN 434
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
+ + T +++ + + A M+ + +R + V W ++ + G+ + +
Sbjct: 435 HNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKV 494
Query: 520 FSDMLNEEVQPNE----VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
S +L E+ P + ++ T + ++ V E S RD K S
Sbjct: 495 MSKIL--ELAPGDGGTHILLTNLYASAGKWNQVIE----MKSTIRDLKLKKS 540
>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Brachypodium distachyon]
Length = 849
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/644 (31%), Positives = 336/644 (52%), Gaps = 37/644 (5%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ HA+ GL + LVSMYG G V A VF+ M + S+ ++ +
Sbjct: 83 RQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALM--AAV 140
Query: 124 NDLYKDIVEFYKCMRK--RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF 181
D + + F C+ D VL C L + G VH VK G +
Sbjct: 141 ADPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAP 200
Query: 182 VLTG-LVDMYAKCRDIGSSRQVFDET---LDKNVVSWTSMIAGYVQNDCAQE--GLVLFN 235
++ LVDMYAKC ++ + F E +NVVSW M+ GY +N A GL+
Sbjct: 201 RVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREM 260
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKC 294
+M E V ++IT+ S++ C+ L L + + LH ++++ G+ + +V AL+ Y +C
Sbjct: 261 QMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRC 320
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA-DFFPNHVTIASV 353
G + A VFD +CS + SW A+I + Q+G A++LF + A P+ +I S+
Sbjct: 321 GCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSL 380
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDV 412
L A L +L G+ H +R GLE + I +L+ +Y +C + AR +F+ EKD
Sbjct: 381 LLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDE 440
Query: 413 IAWNSIISGLDDNVSPDA-------------------VTLVSVISACASLGAVQVGSSLH 453
++WN++I+G N P + S + AC+ L AV++G +H
Sbjct: 441 VSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMH 500
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
++ K L + ++ +++++ Y+KCG AR+ FD ++ K+ V+W+ MI GY + G G
Sbjct: 501 CFALKADLCEDS-FLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRG 559
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF-KFVPSMKHYV 572
++ L+ M E ++P+ + +L AC H GM+ +G CF+ R+ K ++HY
Sbjct: 560 KEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGL-CFFQEMRNLPKIEAKLEHYA 618
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
C++ +L+RAGR +A+ ME MP EPD + + L C ++ +LG+ + K+LEL P
Sbjct: 619 CVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEPH 678
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
KA +YVL SN+YA +W + +VR++++ G++K PGCS +D+
Sbjct: 679 KAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDI 722
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 161/590 (27%), Positives = 260/590 (44%), Gaps = 75/590 (12%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D F LK+C D+G +VH K+G D FV LV MY +C + + +V
Sbjct: 66 DRFTLPPALKSC----RGDDGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKV 121
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE---GFVEGNQITLGSLVTACAKL 259
F+ +N+VSW +++A + GL LF E G ++ TL +++ CA L
Sbjct: 122 FEGMAGRNLVSWNALMAAVAD---PRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAAL 178
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL---CSIDLVSWT 316
G+ +HG +K G + + L+DMY KCG + DA F E ++VSW
Sbjct: 179 AWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWN 238
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWAD--FFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
M+ GY ++G A L + + + + +T+ SVL + L L R +H+ +
Sbjct: 239 VMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVV 298
Query: 375 RLGLE--DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------- 425
R GL V NAL+ Y +C + A +F+ K V +WN++I N
Sbjct: 299 RRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAI 358
Query: 426 -----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
PD ++ S++ AC +L + G + H + + G L + ++ +LL+
Sbjct: 359 ELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNG-LEKDSFIRVSLLS 417
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ--PNE 532
Y +CG AR++FDA+ EK+ V+W+ MI GY G G SL LF +M +++ P+
Sbjct: 418 VYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSL 477
Query: 533 VIFTTILSACSHTGMV--GEGWKCF-------------------YSMCRDFK----FVPS 567
+ T+ L ACS V G+ CF YS C F
Sbjct: 478 LAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDR 537
Query: 568 MK-----HYVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLG 619
+K + M+ A GR +EA+ + M +EPD + L CG + G
Sbjct: 538 LKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDG 597
Query: 620 EVMIKKMLELHPDKAC--YYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
++M L +A +Y V + + GR+ + E+M + +K
Sbjct: 598 LCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPEEPDAK 647
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 132/442 (29%), Positives = 207/442 (46%), Gaps = 41/442 (9%)
Query: 50 IPCLNLLGLC---KSTGSLKAFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFD 104
I L++L +C L+ HA ++ GL T D L++ YG G + +A VFD
Sbjct: 272 ITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFD 331
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL-KEHDNFVFSKVLKACCELRDID 163
+ + S+ +I + N +E ++ M ++ D F +L AC L+ +
Sbjct: 332 GICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLL 391
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G H I++ G DSF+ L+ +Y +C +R +FD +K+ VSW +MIAGY
Sbjct: 392 HGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYS 451
Query: 223 QNDCAQEGLVLFNRM--REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
QN E L LF M ++G + + S + AC++L A+ GK +H + LK + +
Sbjct: 452 QNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCED 511
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
S L ++++DMY KCG++ DAR FD L + D VSWT MI GY +G +A+ L+
Sbjct: 512 SFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGR 571
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCH 395
P+ T +L A G L G M + I LE Y + + M ++
Sbjct: 572 EGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACV---IGMLSRAG 628
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGS----- 450
ADA + E E+ PDA L SV+SAC G V++G
Sbjct: 629 RFADAVALMEVMPEE-----------------PDAKILSSVLSACHMHGEVELGKKVADK 671
Query: 451 --SLHAYSTKQGLLSSNVYVGT 470
L + + +L+SN+Y G+
Sbjct: 672 LLELEPHKAEHYVLASNMYAGS 693
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
D V+PD TL + +C G +HA + K GL + +VG +L++ Y +CG
Sbjct: 61 DGVAPDRFTLPPALKSCRG----DDGRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVD 116
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE---EVQPNEVIFTTILS 540
A VF+ M +N V+W+A++ D L LF D L + P+E T+L
Sbjct: 117 DAEKVFEGMAGRNLVSWNALMAAV---ADPRRGLELFRDCLEDLGGTAAPDEATLVTVLP 173
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA-LEFMENMP 595
C+ G + + + + + + +VD+ A+ G + +A F+E P
Sbjct: 174 MCAALAWPETG-RAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAFLEAPP 228
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/603 (32%), Positives = 316/603 (52%), Gaps = 21/603 (3%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
G + AR +F+ M + D S+ +I Y + + ++ F + D FV S
Sbjct: 97 LGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSV 156
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
LKAC ++ G +H VK G +S FV + LVDMY K VF+ +N
Sbjct: 157 ALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRN 216
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
VVSWT++I G V C+ +GL F+ M V + T + A A+ LH GK +H
Sbjct: 217 VVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHA 276
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+K G +++V L MY KC +F ++ + D+VSWT +I+ Y Q G ++
Sbjct: 277 QTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEER 336
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVD 389
AL F + +D PN T ASV+SA A L G +H +RLGL D +V N+++
Sbjct: 337 ALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIIT 396
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVT 432
+Y+KC ++ +A +F+ + KD+I+W++IIS + P+
Sbjct: 397 LYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFA 456
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
L SV+S C S+ ++ G +HAY+ GL V +AL++ Y++ G+ Q A +FD++
Sbjct: 457 LASVLSVCGSMALLEPGKQVHAYALCIGL-DHETMVHSALISMYSRSGNLQEASKIFDSI 515
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
+ + V+W+AMI GY G +++LF ++ + + P+ V F IL+AC+H G+V G+
Sbjct: 516 KNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGF 575
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ M +++ PS +HY C++DLL RAGRL EA + NMP D ++ L C
Sbjct: 576 YYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRD 635
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+ D ++ML LHP+ A ++ ++N+Y++ GR VR+LMK +G+ K PG S
Sbjct: 636 HGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWS 695
Query: 673 LVD 675
++
Sbjct: 696 WIN 698
Score = 198 bits (503), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 136/453 (30%), Positives = 233/453 (51%), Gaps = 26/453 (5%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
P+ L + K I +R +F++ ++ +SWT++IAGYV + E L+LF+ M
Sbjct: 82 PNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNM 141
Query: 238 R-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCG 295
+ ++ +Q + + ACA ++ G+ LHG+ +K G+ INS V +AL+DMY+K G
Sbjct: 142 WVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGL-INSVFVSSALVDMYMKVG 200
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
SVF+ + + ++VSWTA+IVG +G L F++ + + T A L
Sbjct: 201 KTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALK 260
Query: 356 ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
ASA+ G L+ G+ +H+ I+ G E V+N L MY+KC +F S DV++
Sbjct: 261 ASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVS 320
Query: 415 WNSII----------SGLD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
W ++I LD +VSP+ T SVISACA+L + G +H ++
Sbjct: 321 WTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHAL 380
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
+ GL+ + + V +++ Y+KCG Q A +VFD M K+ ++WS +I Y +
Sbjct: 381 RLGLVDA-LSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAF 439
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVD 576
S M E +PNE ++LS C ++ G + Y++C +M H ++
Sbjct: 440 NYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDH-ETMVH-SALIS 497
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+ +R+G L+EA + +++ D+ + A ++G
Sbjct: 498 MYSRSGNLQEASKIFDSIK-NNDIVSWTAMING 529
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 234/485 (48%), Gaps = 23/485 (4%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H + GL N ++ LV MY G + SVF++M + S+ +I
Sbjct: 173 LHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGC 232
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
D + ++ M + +D+ F+ LKA E + G +H + +K G ++V+
Sbjct: 233 SLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNT 292
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L MY+KCR ++F + +VVSWT++I YVQ + L F RMR+ V N
Sbjct: 293 LGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPN 352
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T S+++ACA L G+ +HG+ L++G+ + +++ +Y KCG +++A VFD
Sbjct: 353 EYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFD 412
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ D++SW+ +I Y Q + +A + PN +ASVLS + L
Sbjct: 413 GMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEP 472
Query: 366 GRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
G+ VH+ + +GL+ T+++ AL+ MY++ + +A IF++ D+++W ++I+G
Sbjct: 473 GKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAE 532
Query: 422 ---------LDDNVS-----PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
L +N+S PD VT + +++AC G V +G + T + ++ +
Sbjct: 533 HGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKE 592
Query: 468 VGTALLNFYAKCGD-AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+++ + G +++ MV + + V WS ++ GD ++ ML
Sbjct: 593 HYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQML-- 650
Query: 527 EVQPN 531
+ PN
Sbjct: 651 RLHPN 655
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 181/369 (49%), Gaps = 13/369 (3%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
KA HA I G NT L +MY Y +F M PD S+ +I Y
Sbjct: 272 KAIHAQTIKQGFNETAYVVNT-LGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQ 330
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-V 182
+ ++ +K MRK + + F+ V+ AC L G ++H +++G D+ V
Sbjct: 331 MGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSV 390
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
++ +Y+KC + + VFD K+++SW+++I+ Y Q A+E + M
Sbjct: 391 SNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGP 450
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ N+ L S+++ C + L GK +H Y L IG++ + + +AL+ MY + GN+++A
Sbjct: 451 KPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASK 510
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+FD + + D+VSWTAMI GY + GY +A+ LF + P++VT +L+A G
Sbjct: 511 IFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGL 570
Query: 363 LNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEK-DVIAWN 416
+++G M + I E Y I +D+ + +++A ++ D + W+
Sbjct: 571 VDLGFYYYKLMTNEYQIAPSKEHYGCI---IDLLCRAGRLSEAEHMVRNMPFPCDDVVWS 627
Query: 417 SIISGLDDN 425
+++ D+
Sbjct: 628 TLLRACRDH 636
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/573 (33%), Positives = 300/573 (52%), Gaps = 55/573 (9%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDET 206
+ +L+ C + + + +H +++ + G LV +Y K + +R+VFDE
Sbjct: 67 YDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEM 126
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
KNVVSWT+MIA Y +++ QE L F M++ ++ N T S++ AC L L +
Sbjct: 127 PVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE-- 184
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
H I+K G E N + L+DMY K G I AR +FD++ D+VSW AMI GY Q+G
Sbjct: 185 -FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNG 243
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG--------------------NLNMG 366
+ ALKLF + D +T ++++ AQ G N +
Sbjct: 244 LIEDALKLFQEIPKRDV----ITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIA 299
Query: 367 RMVHSLGIRLGLEDYTVI--------NALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
V + ++ + + ++ NA++ +A+ + +A +F+T E +V++WN++
Sbjct: 300 GYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAM 359
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I+G N + P+ T V+ ACA+L ++ G+ H + G
Sbjct: 360 IAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGF 419
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
S+V VG L+ YAKCG + AR VFD MR++++ + SAMI GY + G SL LF
Sbjct: 420 -QSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFE 478
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
M ++P+ V F +LSAC H G+V EG + F M R + P+M+HY CM+DLL RA
Sbjct: 479 QMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRA 538
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G +EA + + MPI+PD ++G+ L C ++ DLGE + + ++ L+P YVL+S
Sbjct: 539 GCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLS 598
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
N+YA+ GRW + VR MK R + K GCS +
Sbjct: 599 NIYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWI 631
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 216/448 (48%), Gaps = 63/448 (14%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDKCN-----TKLVSMYGSFGHVKYARSVFDSM 106
CLN KS K HA +I T +C KLVS+Y G + AR VFD M
Sbjct: 74 CLN----AKSLPDAKLLHAHMI---QTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEM 126
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P + S+ MI Y ++ ++ + F+ M+ + ++F F+ +L AC +L + E
Sbjct: 127 PVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE-- 184
Query: 167 KVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
H EIVK GG +S FV GLVDMYAK I +R++FD+ ++VVSW +MIAGYVQN
Sbjct: 185 -FHDEIVK-GGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQN 242
Query: 225 DCAQEGLVLF-----------NRMREGFVEGNQITLGSLVTACAKLRALHQGKW---LHG 270
++ L LF N M G+ + + + V K+ + W + G
Sbjct: 243 GLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVE--NAVELFEKMPEQNLVSWNTMIAG 300
Query: 271 YI-----------LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
Y+ +I E N A++ + + G + +A +F + ++VSW AMI
Sbjct: 301 YVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMI 360
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY+Q+G + ALKLF + D PN T A VL A A L L G H + IR G +
Sbjct: 361 AGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQ 420
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
D V N LV MYAKC I DAR +F+ ++D + +++I G N
Sbjct: 421 SDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQM 480
Query: 426 ----VSPDAVTLVSVISACASLGAVQVG 449
+ PD VT V V+SAC G V G
Sbjct: 481 QFTGLKPDRVTFVGVLSACCHAGLVDEG 508
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 220/490 (44%), Gaps = 71/490 (14%)
Query: 40 TFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKY 98
TFAS LP+ L +LG FH ++ G +N LV MY G +++
Sbjct: 168 TFASI--LPACTDLEVLG---------EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEF 216
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
AR +FD MP D S+ MI Y N L +D ++ ++ + KR D ++ ++ +
Sbjct: 217 ARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----DVITWNTMMAGYAQ 272
Query: 159 LRDIDEGMKVHCEIVK---------VGG-----------------PDSFVLT--GLVDMY 190
D++ +++ ++ + + G P+ V++ ++ +
Sbjct: 273 CGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGF 332
Query: 191 AKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLG 250
A+ + + ++F + NVVSW +MIAGY QN A+ L LF +M+ ++ N T
Sbjct: 333 AQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFA 392
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
++ ACA L L QG H +++ G + + + L+ MY KCG+I DAR VFD +
Sbjct: 393 IVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQ 452
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
D S +AMIVGY +G ++L+LF ++ P+ VT VLSA G ++ GR
Sbjct: 453 DSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYF 512
Query: 371 SLGIRL-----GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ R +E Y ++D+ + +A N +I+ +
Sbjct: 513 DIMTRFYHITPAMEHY---GCMIDLLGRAGCFDEA---------------NDLINKMP-- 552
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PDA S++SAC + + +G + + + YV L N YA G
Sbjct: 553 IKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYV--LLSNIYAAAGRWDDI 610
Query: 486 RMVFDAMREK 495
V + M+++
Sbjct: 611 GSVRNRMKDR 620
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 5/188 (2%)
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+++ + P + T S++ C + ++ LHA+ + ++ +G L++ Y K G
Sbjct: 56 VENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGS 115
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
AR VFD M KN V+W+AMI Y G +L F +M + +QPN F +IL A
Sbjct: 116 LVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPA 175
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C+ ++GE F+ F ++ +VD+ A+ G +E A E + MP + DV
Sbjct: 176 CTDLEVLGE----FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMP-QRDVV 230
Query: 602 LFGAFLHG 609
+ A + G
Sbjct: 231 SWNAMIAG 238
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 333/643 (51%), Gaps = 30/643 (4%)
Query: 61 STGSLKAF------HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
+ ++KAF HA ++ GL N + L+++Y G A++VFD +
Sbjct: 344 AAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVM 403
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ M+ + N+L ++ + ++ M + + D F F +L AC L G +VHC +
Sbjct: 404 WNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTI 463
Query: 174 KVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
K S FV +DMY+K IG ++ +F K+ +SW ++ G QN +E +
Sbjct: 464 KNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 523
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
+ RMR + + ++ + + AC+ +RA GK +H +K GI N + ++L+D+Y
Sbjct: 524 MLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYS 583
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K G++ +R +F ++ + +V A+I G+ Q+ D+A++LF P+ VT +S
Sbjct: 584 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 643
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVIN-ALVDMYAKCHVIADA-RYIFETTSE 409
+LS + N +G+ VH ++ G L D T++ +L +Y K ++ DA + + E
Sbjct: 644 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 703
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
K++ W +IISG N V D T SV+ AC+ + A G +
Sbjct: 704 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 763
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQG 511
H TK G S +AL++ Y+KCGD S+ F ++ K + W++MI G+ G
Sbjct: 764 HGLITKSGFGSYETAT-SALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNG 822
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+L LF M +++P+EV F +L AC+H+G++ EG F SM + + P + HY
Sbjct: 823 YADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHY 882
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C +DLL R G L+EA E ++ +P PD ++ +L C ++ + G++ +K++EL P
Sbjct: 883 ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEP 942
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+ YVL+S+L+A+ G W RE M+++G++K PGCS +
Sbjct: 943 QYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 985
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 272/579 (46%), Gaps = 61/579 (10%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C G L + H ++ G ++ C LV MY G V AR VFD + PD
Sbjct: 174 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 233
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ MI Y Y++ + + M K
Sbjct: 234 TICWSSMIACYHRVGCYQEALALFSRMDK------------------------------- 262
Query: 171 EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
PD L ++ A + + + + + V+W ++I+G+ Q+
Sbjct: 263 ---MGSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV 319
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L L+ MR + + T S+++A A ++A +G+ +H + G++ N + ++L+++
Sbjct: 320 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 379
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KCG DA++VFD C ++V W AM+ G+ Q+ P++A+++F + T
Sbjct: 380 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 439
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE 409
S+L A L + +G+ VH + I+ ++ V NA +DMY+K I DA+ +F
Sbjct: 440 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 499
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
KD I+WN++ GL N ++PD V+ + I+AC+++ A + G +
Sbjct: 500 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 559
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H + K G+ SN VG++L++ Y+K GD +S+R +F + + V +A+I G+ +
Sbjct: 560 HCLAIKYGIC-SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNN 618
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHT--GMVGEGWKCFYSMCRDFKFVPSMKH 570
++ LF +L + ++P+ V F++ILS CS + +G+ C Y++ + ++
Sbjct: 619 EDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHC-YTLKSGVLYDDTLLG 677
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
V + + ++ LE+A + + MP ++ + A + G
Sbjct: 678 -VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 715
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 140/548 (25%), Positives = 255/548 (46%), Gaps = 64/548 (11%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR-KRLKEH 144
LV +Y G V YA S + ++ + + D++ ++ +R
Sbjct: 107 LVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRP 166
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVF 203
D F + VL AC + + G +VHC++VK G S F LVDMYAKC D+ ++R+VF
Sbjct: 167 DQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVF 226
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D + + W+SMIA Y + C QE L LF+RM + +Q+TL ++++ A
Sbjct: 227 DGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLA------ 280
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G + A ++ ++ + V+W A+I G+
Sbjct: 281 -----------------------------SSGRLDHATALLKKMPTPSTVAWNAVISGHA 311
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
QSG L L+ D + +P T AS+LSA+A + G+ +H+ + GL+ +
Sbjct: 312 QSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVF 371
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP-------------- 428
V ++L+++YAKC +DA+ +F+ + EK+++ WN++++G N P
Sbjct: 372 VGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYT 431
Query: 429 ---DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
D T VS++ AC L + +G +H + K + +++V A L+ Y+K G A
Sbjct: 432 LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKN-CMDISLFVANATLDMYSKYGAIGDA 490
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ +F + K++++W+A+ G + ++ + M + P++V F+T ++ACS+
Sbjct: 491 KALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI 550
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENM---PIEPDV 600
G + C K+ H V ++DL ++ G +E + + + I P
Sbjct: 551 RATETGKQIH---CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 607
Query: 601 SLFGAFLH 608
+L F+
Sbjct: 608 ALIAGFVQ 615
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 250/525 (47%), Gaps = 47/525 (8%)
Query: 168 VHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I++ G P L LV++Y K +G + ++ + +S+++ + ++
Sbjct: 88 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 147
Query: 227 AQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ L F +R +Q L +++AC+++ L G+ +H ++K G +
Sbjct: 148 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 207
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY KCG++ +AR VFD + D + W++MI Y + G +AL LF+ P
Sbjct: 208 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 267
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGI--RLGLEDYTVINALVDMYAKCHVIADARYI 403
+ VT+ +++S A + GR+ H+ + ++ NA++ +A+ + + +
Sbjct: 268 DQVTLVTIISTLA-----SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGL 322
Query: 404 FETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
+ KD+ +W + P T S++SA A++ A G +HA + G L
Sbjct: 323 Y-----KDMRSW---------GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG-LD 367
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+NV+VG++L+N YAKCG A+ VFD EKN V W+AM+ G+ ++ +F M
Sbjct: 368 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 427
Query: 524 LNEEVQPNEVIFTTILSACSHTG--MVGEGWKCF-YSMCRDFK-FVPSMKHYVCMVDLLA 579
+ +Q +E F +IL AC++ +G+ C C D FV + +D+ +
Sbjct: 428 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN-----ATLDMYS 482
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH---PDKACY 636
+ G + +A +P + +S + A G + M+K+M LH PD +
Sbjct: 483 KYGAIGDAKALFSLIPYKDSIS-WNALTVGLAQNLEEEEAVCMLKRM-RLHGITPDDVSF 540
Query: 637 YVLV---SNLYASDGRWIRVNQVRELMKQRGL--SKSPGCSLVDL 676
+ SN+ A++ Q+ L + G+ + + G SL+DL
Sbjct: 541 STAINACSNIRATE----TGKQIHCLAIKYGICSNHAVGSSLIDL 581
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 174/469 (37%), Positives = 273/469 (58%), Gaps = 22/469 (4%)
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L LF+RM + N T +CA L L + H + K+ + + H +L+
Sbjct: 100 ALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLVFKLALHSDPHTTHSLIT 159
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF-PNHV 348
MY +CG + AR VFDE+ DLVSW +MI GY ++G +A+++F + D F P+ +
Sbjct: 160 MYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEM 219
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETT 407
++ SVL A +LG+L +GR V + G+ + I +AL+ MYAKC + AR IF+
Sbjct: 220 SLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGM 279
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
+ +DVI WN++ISG +D V+ + +TL +V+SACA++GA+ +G
Sbjct: 280 AARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGK 339
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+ Y++++G +++V TAL++ YAKCG SA+ VF M +KN +W+AMI
Sbjct: 340 QIDEYASQRGF-QHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASH 398
Query: 511 GDGGGSLALFSDMLNEE--VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G +L+LF M +E +PN++ F +LSAC H G+V EG++ F M F VP +
Sbjct: 399 GKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKI 458
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY CMVDLLARAG L EA + +E MP +PD GA L C D+GE +I+ +LE
Sbjct: 459 EHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRMILE 518
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ P + Y++ S +YA+ W ++R LM+Q+G++K+PGCS ++++
Sbjct: 519 VDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVE 567
Score = 226 bits (575), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 249/478 (52%), Gaps = 36/478 (7%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVM 117
C S+ +L+ HA ++V + N L+S + YA +F + P+P+ Y+F +M
Sbjct: 28 CSSSKTLQQVHAQMVVKSSIHSP-NNHLLSKAIHLKNFTYASLLFSHIAPHPNDYAFNIM 86
Query: 118 IR-----WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
IR W+ + F++ M L ++ L +C L + H +
Sbjct: 87 IRALTTTWHHYP---LALTLFHRMMSLSLSPNNFTFPFFFL-SCANLAVLSPARAAHSLV 142
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
K+ D L+ MY++C + +R+VFDE +++VSW SMIAGY + CA+E +
Sbjct: 143 FKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAV 202
Query: 232 VLFNRM--REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+F M R+GF E ++++L S++ AC +L L G+W+ G++++ G+ +NS++ +AL+
Sbjct: 203 EVFGEMGRRDGF-EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALIS 261
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG++ AR +FD + + D+++W A+I GY Q+G D+A+ LF K N +T
Sbjct: 262 MYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKIT 321
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+ +VLSA A +G L++G+ + + G + D V AL+DMYAKC +A A+ +F+
Sbjct: 322 LTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMP 381
Query: 409 EKDVIAWNSIISGLDDN-------------------VSPDAVTLVSVISACASLGAVQVG 449
+K+ +WN++IS L + P+ +T V ++SAC G V G
Sbjct: 382 QKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEG 441
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGG 506
L + L + + +++ A+ G A + + M EK + VT A++G
Sbjct: 442 YRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGA 499
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 152/463 (32%), Positives = 231/463 (49%), Gaps = 50/463 (10%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNT-KLVSMYGSFGHVKYARSVFDSMPN 108
+ C NL L + +A H+L+ L +D T L++MY G V +AR VFD +P
Sbjct: 124 LSCANLAVLSPA----RAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPR 179
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMK 167
D S+ MI Y ++ VE + M +R E D VL AC EL D++ G
Sbjct: 180 RDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRW 239
Query: 168 VHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
V +V+ G +S++ + L+ MYAKC D+GS+R++FD ++V++W ++I+GY QN
Sbjct: 240 VEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGM 299
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
A E + LF+ M+E V N+ITL ++++ACA + AL GK + Y + G + + + TA
Sbjct: 300 ADEAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATA 359
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT--DKKWADFF 344
L+DMY KCG++ A+ VF E+ + SW AMI G +AL LF +
Sbjct: 360 LIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGAR 419
Query: 345 PNHVTIASVLSASAQLGNLNMG-RMVHSLGIRLGL----EDYTVINALVDMYAKCHVIAD 399
PN +T +LSA G +N G R+ + GL E Y+ +VD+ A+ + +
Sbjct: 420 PNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSC---MVDLLARAGHLYE 476
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSS-----LHA 454
A + E EK PD VTL +++ AC S V +G L
Sbjct: 477 AWDLIEKMPEK-----------------PDKVTLGALLGACRSKKNVDIGERVIRMILEV 519
Query: 455 YSTKQG--LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ G ++SS +Y A LN + SARM MR+K
Sbjct: 520 DPSNSGNYIISSKIY---ANLNMW-----EDSARMRL-LMRQK 553
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/484 (36%), Positives = 281/484 (58%), Gaps = 23/484 (4%)
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
++I +N + N M +E + T+ ++ A A ++ + +G+ +H +K
Sbjct: 79 NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHARSIK 138
Query: 275 IG-IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
G + N ++ L+ +Y CG+I D + VFDE DLVSWT +I +T++G +A++
Sbjct: 139 TGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVE 198
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE---DYTVINALVDM 390
F + + T+ VLSA + LG+LN+G+ VHS IR ++ D V NAL+DM
Sbjct: 199 AFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSY-IRHYIDMKADVFVGNALLDM 257
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTL 433
Y KC + A +F+ K+V+ WN++ISGL D V PD VTL
Sbjct: 258 YLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTL 317
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
V V+++CA+LG +++G +HAY + +L+ +VG ALL+ YAKCG A VF++M+
Sbjct: 318 VGVLNSCANLGVLEIGKWVHAYMRRNHILADK-FVGNALLDMYAKCGSIDEAFRVFESMK 376
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
++ +++AMI G + G+ + +FS+M ++PNEV F +L ACSH G+V EG K
Sbjct: 377 RRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKK 436
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F+ M +K P +HY CM+DLL RAG ++EA E + M I PDV GA L C ++
Sbjct: 437 YFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIH 496
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
D+GE +++K+ EL PD+ Y+L++NLY+S RW ++R+ MK + + K+PGCSL
Sbjct: 497 GNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCSL 556
Query: 674 VDLD 677
+++D
Sbjct: 557 IEVD 560
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 205/457 (44%), Gaps = 32/457 (7%)
Query: 49 SIP-CLNLLGLCKSTGSLKAFHALLIVDGLT--NDKCNTKLVSMYGSFGHVKYARSVFDS 105
+IP L L L + + HA I G+ N + L+ +Y G + + VFD
Sbjct: 112 TIPLVLKALALIQGIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDE 171
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P+ D S+ +I+ + LY VE + M D VL AC L D++ G
Sbjct: 172 CPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLG 231
Query: 166 MKVHCEIVKV--GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
KVH I D FV L+DMY KC D+ S+ +VFDE KNVV+W +MI+G
Sbjct: 232 QKVHSYIRHYIDMKADVFVGNALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAY 291
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+E L F M++ V+ +++TL ++ +CA L L GKW+H Y+ + I + +
Sbjct: 292 QGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFV 351
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
ALLDMY KCG+I +A VF+ + D+ S+TAMI G G + A ++F++
Sbjct: 352 GNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGI 411
Query: 344 FPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIA 398
PN VT +L A + G + G+ M +R E Y ++D+ + ++
Sbjct: 412 EPNEVTFLGLLMACSHGGLVAEGKKYFFQMSDKYKLRPQAEHY---GCMIDLLGRAGLVK 468
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
+A I + PD +++ AC G V +G S+ T+
Sbjct: 469 EAEEIIHKME-----------------IRPDVFACGALLGACRIHGNVDIGESVMQKLTE 511
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
Y+ + N Y+ + A + M+ K
Sbjct: 512 LDPDEEGTYI--LMTNLYSSVHRWKDALKIRKTMKNK 546
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 144/518 (27%), Positives = 241/518 (46%), Gaps = 33/518 (6%)
Query: 56 LGLCKSTGSLKAFHALLI-VDGLTNDKCNTKLVSMYGSFGHVK---YARSVFDSMPNPDF 111
L CKS LK H + I L+ KL+ + S Y RS+ + +
Sbjct: 13 LNSCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILLTHSHDAQ 72
Query: 112 YSFQV---MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ + +IR N + +EF M E D F VLKA ++ I EG ++
Sbjct: 73 FCLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQI 132
Query: 169 HCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
H +K G G + +V L+ +Y+ C I ++VFDE +++VSWT++I + +
Sbjct: 133 HARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGL 192
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK-IGIEINSHLVT 285
+ F M + + + TL +++AC+ L L+ G+ +H YI I ++ + +
Sbjct: 193 YSRAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGN 252
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
ALLDMY+KC ++ A VFDE+ ++V+W AMI G G +AL F + P
Sbjct: 253 ALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKP 312
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIF 404
+ VT+ VL++ A LG L +G+ VH+ R L D V NAL+DMYAKC I +A +F
Sbjct: 313 DEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVF 372
Query: 405 ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQ 447
E+ +DV ++ ++I GL + + P+ VT + ++ AC+ G V
Sbjct: 373 ESMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVA 432
Query: 448 VGSS-LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIG 505
G S K L + G +++ + G + A + M + V A++G
Sbjct: 433 EGKKYFFQMSDKYKLRPQAEHYG-CMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLG 491
Query: 506 GYGMQG--DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ G D G S+ L+ + + ++ T + S+
Sbjct: 492 ACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSS 529
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 333/643 (51%), Gaps = 30/643 (4%)
Query: 61 STGSLKAF------HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
+ ++KAF HA ++ GL N + L+++Y G A++VFD +
Sbjct: 334 AAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVM 393
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ M+ + N+L ++ + ++ M + + D F F +L AC L G +VHC +
Sbjct: 394 WNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTI 453
Query: 174 KVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
K S FV +DMY+K IG ++ +F K+ +SW ++ G QN +E +
Sbjct: 454 KNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 513
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
+ RMR + + ++ + + AC+ +RA GK +H +K GI N + ++L+D+Y
Sbjct: 514 MLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYS 573
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K G++ +R +F ++ + +V A+I G+ Q+ D+A++LF P+ VT +S
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVIN-ALVDMYAKCHVIADA-RYIFETTSE 409
+LS + N +G+ VH ++ G L D T++ +L +Y K ++ DA + + E
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
K++ W +IISG N V D T SV+ AC+ + A G +
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQG 511
H TK G S +AL++ Y+KCGD S+ F ++ K + W++MI G+ G
Sbjct: 754 HGLITKSGFGSYETAT-SALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNG 812
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+L LF M +++P+EV F +L AC+H+G++ EG F SM + + P + HY
Sbjct: 813 YADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHY 872
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C +DLL R G L+EA E ++ +P PD ++ +L C ++ + G++ +K++EL P
Sbjct: 873 ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEP 932
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+ YVL+S+L+A+ G W RE M+++G++K PGCS +
Sbjct: 933 QYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 975
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 272/579 (46%), Gaps = 61/579 (10%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C G L + H ++ G ++ C LV MY G V AR VFD + PD
Sbjct: 164 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 223
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ MI Y Y++ + + M K
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKM------------------------------ 253
Query: 171 EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
PD L ++ A + + + + + V+W ++I+G+ Q+
Sbjct: 254 ----GSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV 309
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L L+ MR + + T S+++A A ++A +G+ +H + G++ N + ++L+++
Sbjct: 310 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 369
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KCG DA++VFD C ++V W AM+ G+ Q+ P++A+++F + T
Sbjct: 370 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 429
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE 409
S+L A L + +G+ VH + I+ ++ V NA +DMY+K I DA+ +F
Sbjct: 430 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 489
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
KD I+WN++ GL N ++PD V+ + I+AC+++ A + G +
Sbjct: 490 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 549
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H + K G+ SN VG++L++ Y+K GD +S+R +F + + V +A+I G+ +
Sbjct: 550 HCLAIKYGIC-SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNN 608
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHT--GMVGEGWKCFYSMCRDFKFVPSMKH 570
++ LF +L + ++P+ V F++ILS CS + +G+ C Y++ + ++
Sbjct: 609 EDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHC-YTLKSGVLYDDTLLG 667
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
V + + ++ LE+A + + MP ++ + A + G
Sbjct: 668 -VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/548 (25%), Positives = 255/548 (46%), Gaps = 64/548 (11%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR-KRLKEH 144
LV +Y G V YA S + ++ + + D++ ++ +R
Sbjct: 97 LVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRP 156
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVF 203
D F + VL AC + + G +VHC++VK G S F LVDMYAKC D+ ++R+VF
Sbjct: 157 DQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVF 216
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D + + W+SMIA Y + C QE L LF+RM + +Q+TL ++++ A
Sbjct: 217 DGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLA------ 270
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G + A ++ ++ + V+W A+I G+
Sbjct: 271 -----------------------------SSGRLDHATALLKKMPTPSTVAWNAVISGHA 301
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
QSG L L+ D + +P T AS+LSA+A + G+ +H+ + GL+ +
Sbjct: 302 QSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVF 361
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP-------------- 428
V ++L+++YAKC +DA+ +F+ + EK+++ WN++++G N P
Sbjct: 362 VGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYT 421
Query: 429 ---DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
D T VS++ AC L + +G +H + K + +++V A L+ Y+K G A
Sbjct: 422 LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKN-CMDISLFVANATLDMYSKYGAIGDA 480
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ +F + K++++W+A+ G + ++ + M + P++V F+T ++ACS+
Sbjct: 481 KALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI 540
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENM---PIEPDV 600
G + C K+ H V ++DL ++ G +E + + + I P
Sbjct: 541 RATETGKQIH---CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597
Query: 601 SLFGAFLH 608
+L F+
Sbjct: 598 ALIAGFVQ 605
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 250/525 (47%), Gaps = 47/525 (8%)
Query: 168 VHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I++ G P L LV++Y K +G + ++ + +S+++ + ++
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 227 AQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ L F +R +Q L +++AC+++ L G+ +H ++K G +
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY KCG++ +AR VFD + D + W++MI Y + G +AL LF+ P
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGI--RLGLEDYTVINALVDMYAKCHVIADARYI 403
+ VT+ +++S A + GR+ H+ + ++ NA++ +A+ + + +
Sbjct: 258 DQVTLVTIISTLA-----SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGL 312
Query: 404 FETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
+ KD+ +W + P T S++SA A++ A G +HA + G L
Sbjct: 313 Y-----KDMRSW---------GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG-LD 357
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+NV+VG++L+N YAKCG A+ VFD EKN V W+AM+ G+ ++ +F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 524 LNEEVQPNEVIFTTILSACSHTG--MVGEGWKCF-YSMCRDFK-FVPSMKHYVCMVDLLA 579
+ +Q +E F +IL AC++ +G+ C C D FV + +D+ +
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN-----ATLDMYS 472
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH---PDKACY 636
+ G + +A +P + +S + A G + M+K+M LH PD +
Sbjct: 473 KYGAIGDAKALFSLIPYKDSIS-WNALTVGLAQNLEEEEAVCMLKRM-RLHGITPDDVSF 530
Query: 637 YVLV---SNLYASDGRWIRVNQVRELMKQRGL--SKSPGCSLVDL 676
+ SN+ A++ Q+ L + G+ + + G SL+DL
Sbjct: 531 STAINACSNIRATE----TGKQIHCLAIKYGICSNHAVGSSLIDL 571
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 312/564 (55%), Gaps = 54/564 (9%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVDM---YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H +++K G ++ + L+ L+++ + + VF+ + N++ W +M G+
Sbjct: 52 IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 111
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ L L+ M + N T L+ +CAK +A +G+ +HG++LK+G +++ +
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFV 171
Query: 284 VTALLDMYVKCGNIRDARSVFD-------------------------------ELCSIDL 312
T+L+ +YV+ G + DAR VFD E+ D+
Sbjct: 172 HTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDV 231
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW AMI GY ++G +AL+LF + + P+ T+ +V+SA AQ G++ +GR VHS
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSW 291
Query: 373 GIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
G + ++N+L+D+Y+KC + A +FE KDVI+WN++I G
Sbjct: 292 IDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEA 351
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-VGTALL 473
L P+ VT++S++ ACA LGA+ +G +H Y K+ ++N + T+L+
Sbjct: 352 LLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLI 411
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ YAKCGD ++A VF+++ K+ +W+AMI G+ M G + +FS M ++P+++
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDI 471
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +LSACS +GM+ G F +M +D+K P ++HY CM+DLL +G +EA E + N
Sbjct: 472 TFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINN 531
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M +EPD ++ + L C + +LGE + ++++ P+ YVL+SN+YA+ GRW V
Sbjct: 532 MEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEV 591
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
++R L+ +G+ K PGCS +++D
Sbjct: 592 AKIRALLNDKGMKKVPGCSSIEID 615
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 165/603 (27%), Positives = 279/603 (46%), Gaps = 100/603 (16%)
Query: 44 FHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTN-DKCNTKLVSM---YGSFGHVKYA 99
+ SL + P L+LL CK+ SL+ HA +I GL N + +KL+ + F + YA
Sbjct: 28 YDSLRNHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYA 87
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
SVF+++ P+ + M R + L+ ++ Y CM +++ F +LK+C +
Sbjct: 88 ISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKS 147
Query: 160 RDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC---------------RD-------- 195
+ EG ++H ++K+G D FV T L+ +Y + RD
Sbjct: 148 KAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALI 207
Query: 196 --------IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
I S++++FDE K+VVSW +MI+GY + +E L LF M + + ++
Sbjct: 208 KGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDES 267
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T+ ++V+ACA+ ++ G+ +H +I G N +V +L+D+Y KCG + A +F+ L
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGL 327
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
D++SW +I GYT +AL LF + + PN VT+ S+L A A LG +++GR
Sbjct: 328 LYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGR 387
Query: 368 MVH---SLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
+H ++ ++ +L+DMYAKC I A +F + K + +WN++I G
Sbjct: 388 WIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+ PD +T V ++SAC+ G + +G
Sbjct: 448 HGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLG------------------ 489
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF---SDML 524
R +F M + +T + YG D G LF +M+
Sbjct: 490 ------------------RHIFRTMTQDYKIT--PKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 525 NE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
N E++P+ VI+ ++L AC G V G ++ + P YV + ++ A AGR
Sbjct: 530 NNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGC--YVLLSNIYATAGR 587
Query: 584 LEE 586
E
Sbjct: 588 WNE 590
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 43/376 (11%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ ++ C +GS+ + H+ + G +N K L+ +Y G ++ A +F+ +
Sbjct: 270 VTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLY 329
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D S+ +I Y +LYK+ + ++ M + + ++ +L AC L ID G +
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWI 389
Query: 169 HCEI---VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
H I +K S + T L+DMYAKC DI ++ QVF+ L K++ SW +MI G+ +
Sbjct: 390 HVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHG 449
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A +F+RMR+ +E + IT L++AC++ L G+ +I + + + +T
Sbjct: 450 RADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGR----HIFRTMTQ--DYKIT 503
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
L+ Y C IDL+ SG +A ++ + + P
Sbjct: 504 PKLEHYG---------------CMIDLLG---------HSGLFKEAEEMINN---MEMEP 536
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYA---KCHVIADARY 402
+ V S+L A GN+ +G I++ E+ L ++YA + + +A R
Sbjct: 537 DGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVAKIRA 596
Query: 403 IFETTSEKDVIAWNSI 418
+ K V +SI
Sbjct: 597 LLNDKGMKKVPGCSSI 612
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF---YAKCGDAQSARMVFD 490
+S++ C +L ++++ +HA K GL ++N Y + LL A VF+
Sbjct: 37 LSLLHNCKTLQSLRL---IHAQMIKTGLHNTN-YALSKLLELCVISPHFDGLPYAISVFE 92
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
++E N + W+ M G+ + D +L L+ M++ + PN F +L +C+ + E
Sbjct: 93 TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKE 152
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
G + + + + + ++ + + GRLE+A + + P DV + A + G
Sbjct: 153 GQQ-IHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSP-HRDVVSYTALIKG 209
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 300/556 (53%), Gaps = 61/556 (10%)
Query: 179 DSFVLTGLVDMYA--KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D F + L+ A + R + S ++ + N+ SW I G+ +++ +E +L+ +
Sbjct: 84 DPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQ 143
Query: 237 M-REGFVEG--NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
M R G E + T L CA LR G + G++LK+ +E+ SH+ A + M+
Sbjct: 144 MLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFAS 203
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CG++ +AR VFDE DLVSW +I GY + G +KA+ ++ + P+ VT+ +
Sbjct: 204 CGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGL 263
Query: 354 LSASAQLGNLNMGR----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSE 409
+S+ + LG+LN G+ V G+R+ + ++NAL+DM++KC I +AR IF+ +
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTI---PLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 410 KDVIAWNSIISG-------------LDD-------------------------------- 424
+ +++W ++ISG DD
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 425 ---NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
N PD +T++ +SAC+ LGA+ VG +H Y K L S NV +GT+L++ YAKCG+
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSL-SLNVALGTSLVDMYAKCGN 439
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A VF ++ +N++T++A+IGG + GD +++ F++M++ + P+E+ F +LSA
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C H GM+ G F M F P +KHY MVDLL RAG LEEA ME+MP+E D +
Sbjct: 500 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 559
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++GA L GC ++ +LGE KK+LEL P + YVL+ +Y W + R +M
Sbjct: 560 VWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMN 619
Query: 662 QRGLSKSPGCSLVDLD 677
+RG+ K PGCS ++++
Sbjct: 620 ERGVEKIPGCSSIEVN 635
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/564 (26%), Positives = 268/564 (47%), Gaps = 87/564 (15%)
Query: 23 FFSYTNQQT---PTQHELDQTFASFHSLP-SIPCLNLLGLCKSTGSLKAFHALLIVDGLT 78
+S++ ++T P + + S HS P L+LL CK LK A +I++GL
Sbjct: 23 LYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLI 82
Query: 79 NDK-CNTKLVSM--YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK 135
D +++L++ ++ Y+ + + NP+ +S+ V IR + ++ K+ YK
Sbjct: 83 LDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYK 142
Query: 136 CMRKR---LKEHDNFVFSKVLKACCELRDIDEG-------MKVHCEIVKVGGPDSFVLTG 185
M + D+F + + K C +LR G +K+ E+V S V
Sbjct: 143 QMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELV------SHVHNA 196
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
+ M+A C D+ ++R+VFDE+ +++VSW +I GY + A++ + ++ M V+ +
Sbjct: 197 SIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPD 256
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+T+ LV++C+ L L++GK + Y+ + G+ + LV AL+DM+ KCG+I +AR +FD
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF--------------------- 344
L +VSWT MI GY + G D + KLF D + D
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 345 ----------PNHVTIASVLSASAQLGNLNMGRMVH--------SLGIRLGLEDYTVINA 386
P+ +T+ LSA +QLG L++G +H SL + LG +
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALG-------TS 429
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPD 429
LVDMYAKC I++A +F ++ + + +II GL D ++PD
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+T + ++SAC G +Q G + + L+ + + +++ + G + A +
Sbjct: 490 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Query: 490 DAMR-EKNTVTWSAMIGGYGMQGD 512
++M E + W A++ G M G+
Sbjct: 550 ESMPMEADAAVWGALLFGCRMHGN 573
>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 884
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 206/655 (31%), Positives = 336/655 (51%), Gaps = 27/655 (4%)
Query: 47 LPSIPCLNLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSV 102
L S P L L C +++ H+LL+ G + LVSMY + AR +
Sbjct: 182 LSSFPAL--LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 103 FDSMPNP-DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
FD D + ++ Y + + +E ++ M +++ L AC
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 162 IDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
G ++H ++K S +V L+ MY +C + + ++ + + +VV+W S+I
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GYVQN +E L F+ M + +++++ S++ A +L L G LH Y++K G +
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
N + L+DMY KC F + DL+SWT +I GY Q+ +AL+LF D
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
+ + + S+L AS+ L ++ + + +H +R GL D + N LVD+Y KC +
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 539
Query: 400 ARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACAS 442
A +FE+ KDV++W S+IS ++ +S D+V L+ ++SA AS
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L A+ G +H Y ++G + A+++ YA CGD QSA+ VFD + K + +++
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGS-IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI YGM G G ++ LF M +E V P+ + F +L ACSH G++ EG M ++
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
+ P +HYVC+VD+L RA + EA EF++ M EP ++ A L C +S ++GE+
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+++LEL P VLVSN++A GRW V +VR MK G+ K PGCS +++D
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 833
Score = 221 bits (564), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 170/616 (27%), Positives = 289/616 (46%), Gaps = 59/616 (9%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KLV MYG G + A VFD MP+ +++ MI Y N + Y MR
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
F +LKAC +LRDI G ++H +VK+G F++ LV MYAK D+ ++R++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 204 DETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
D +K + V W S+++ Y + + E L LF M N T+ S +TAC
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 263 HQGKWLHGYILKIGIEINS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
GK +H +LK + ++ AL+ MY +CG + A + ++ + D+V+W ++I G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Y Q+ +AL+ F+D A + V++ S+++AS +L NL G +H+ I+ G + +
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V N L+DMY+KC++ F +KD+I+W ++I+G N
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ D + L S++ A + L ++ + +H + ++GLL + + L++ Y KC +
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMG 538
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A VF++++ K+ V+W++MI + G+ ++ LF M+ + + V ILSA +
Sbjct: 539 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 544 HTGMVGEGWK--CF-------------------YSMCRDFKFVPS---------MKHYVC 573
+ +G + C+ Y+ C D + + + Y
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 574 MVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM---L 627
M++ G + A+E + M + PD F A L+ C D G +K M
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 628 ELHPDKACYYVLVSNL 643
EL P Y LV L
Sbjct: 719 ELEPWPEHYVCLVDML 734
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 203/422 (48%), Gaps = 31/422 (7%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPD---SFVLTGLVDMYAKCRDIGSSRQVFD 204
F+ VL+ C + R + +G ++H I K P F+ LV MY KC + + +VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTF-PSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS---LVTACAKLRA 261
E D+ +W +MI YV N L L+ MR VEG + L S L+ ACAKLR
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR---VEGVPLGLSSFPALLKACAKLRD 197
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-DLVSWTAMIV 320
+ G LH ++K+G +V AL+ MY K ++ AR +FD D V W +++
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
Y+ SG + L+LF + PN TI S L+A +G+ +H+ ++
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV------------ 426
+ V NAL+ MY +C + A I + DV+ WNS+I G N+
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 427 -----SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
D V++ S+I+A L + G LHAY K G SN+ VG L++ Y+KC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-WDSNLQVGNTLIDMYSKCNL 436
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
F M +K+ ++W+ +I GY +L LF D+ + ++ +E+I +IL A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 542 CS 543
S
Sbjct: 497 SS 498
>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
Length = 745
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 195/610 (31%), Positives = 321/610 (52%), Gaps = 21/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++ MYG + AR VFD + + +S+ +++ Y N +Y++ +E YK M ++ D
Sbjct: 8 IIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVRKEISID 67
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ S VL AC +L D++EG V + ++G D V T L+ ++AKC + + VF
Sbjct: 68 AYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFR 127
Query: 205 ET-LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
++++S T+MI YV++ L + +MR +E + T +++ AC+ L
Sbjct: 128 SMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGACSSPDFLL 187
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +H +IL+ N + AL+ MY KCG+++D++S+F + D+VSW AMI YT
Sbjct: 188 DGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWNAMIAAYT 247
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
G+ A LF P+ T +S+L A A L GRM+H G + D+
Sbjct: 248 LYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFA 307
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ N L+ M+ +C + AR F + +K++ AWN++++ L +
Sbjct: 308 MQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEG 367
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+PD T SV+ +CASLGA++ G +H ST G +V +GTAL+N YAKCG A
Sbjct: 368 FTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGF-EKDVILGTALVNMYAKCGSLADA 426
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ FD + K+ V+WSAMI G +L L M + + NEV +++L ACSH
Sbjct: 427 KKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHG 486
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G + EG F + +DF ++ V +DLL RAG L+EA + MP +
Sbjct: 487 GRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVT 546
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L GC ++ G+ + K+++ L P+ YVL++N+YA+ GRW V ++R M+++G+
Sbjct: 547 LLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGV 606
Query: 666 SKSPGCSLVD 675
+ GCS ++
Sbjct: 607 KRQTGCSSIE 616
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 217/428 (50%), Gaps = 21/428 (4%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D+F+ ++ MY KC+ +RQVFD +N SW+ ++ YVQN QE L ++ M
Sbjct: 1 DTFLANMIIQMYGKCKSPEDARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMV 60
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ + TL S++ AC KL + +G+ + ++G E + + T+L+ ++ KCG +
Sbjct: 61 RKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLE 120
Query: 299 DARSVFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+A SVF + ++ D++S TAMI Y + G D AL + + P+ T A++L A
Sbjct: 121 EAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAILGAC 180
Query: 358 AQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ L G+ +H + + +V NAL+ MYAKC + D++ +F T KDV++WN
Sbjct: 181 SSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKDVVSWN 240
Query: 417 SIIS-----GLDDNV------------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I+ G D + +PD T S++ ACAS ++ G LH T +
Sbjct: 241 AMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHVRITAR 300
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G + + L++ + +CG +SAR F ++ +K W+ M+ Y G +L L
Sbjct: 301 G-FDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKDALFL 359
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
+ +ML E P+ F++++ +C+ G + EG K + F + +V++ A
Sbjct: 360 YKNMLLEGFTPDRFTFSSVVDSCASLGALREG-KFIHECSTSCGFEKDVILGTALVNMYA 418
Query: 580 RAGRLEEA 587
+ G L +A
Sbjct: 419 KCGSLADA 426
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 204/451 (45%), Gaps = 32/451 (7%)
Query: 55 LLGLCKSTGSL---KAFHA-LLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+LG C S L K H +L N L++MY G +K ++S+F +M D
Sbjct: 176 ILGACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKCGSLKDSKSLFLTMDVKD 235
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ MI Y L KD + M D + FS +L AC + +++G +H
Sbjct: 236 VVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLHV 295
Query: 171 EIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
I G F + L+ M+ +C + S+R+ F K + +W +M+A Y Q D ++
Sbjct: 296 RITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKGKD 355
Query: 230 GLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
L L+ N + EGF ++ T S+V +CA L AL +GK++H G E + L TAL+
Sbjct: 356 ALFLYKNMLLEGFTP-DRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTALV 414
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
+MY KCG++ DA+ FD + + D+VSW+AMI Q G+ ++AL+L N V
Sbjct: 415 NMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNEV 474
Query: 349 TIASVLSASAQLGNLNMG-RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T +SVL A + G L G L G+E D +D+ + + +A ++ T
Sbjct: 475 TASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLHT 534
Query: 407 TSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ--GLLSS 464
K V LV+++ C G V+ G +L TK+ L
Sbjct: 535 MPFK-----------------VSFVALVTLLGGCKVHGDVRRGKAL----TKRIVALEPE 573
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
N L N YA G + MR+K
Sbjct: 574 NPGSYVLLNNMYAAAGRWDDVAKLRRYMRKK 604
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 272/467 (58%), Gaps = 22/467 (4%)
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L L+++M+ + N T + ACA L + + H + K+G++ + H V +++ M
Sbjct: 102 LHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTM 161
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVT 349
Y +CG AR VFDE+ DLVSW +++ GY + G+ +A+++F ++ + F P+ ++
Sbjct: 162 YFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMS 221
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTS 408
+ SVL A +LG+L +GR V + G++ + I +AL+ MY+KC + +R IF+
Sbjct: 222 LVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMP 281
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+D I WN+ IS N V P+ VTL +V+SACAS+GA+ +G
Sbjct: 282 SRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQ 341
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+ Y+T +GL +++V TAL++ YAKCG +SA+ VF+ M KN +W+AMI G
Sbjct: 342 MDEYATHRGL-QHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHG 400
Query: 512 DGGGSLALFSDMLNE--EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
+L+LF M +E +PN++ F ++LSAC H G+V EG++ F M F VP ++
Sbjct: 401 KAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIE 460
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVDLL+RAG L EA + +E MP +PD GA C D+GE +I+ +LEL
Sbjct: 461 HYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLEL 520
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P + Y++ S +Y + W ++R LM++ G++K+PGCS +++
Sbjct: 521 DPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEV 567
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 154/486 (31%), Positives = 253/486 (52%), Gaps = 38/486 (7%)
Query: 48 PSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSM- 106
P L+LL C ST +L+ H + + K N L+S S Y+ +F +
Sbjct: 20 PIFLLLSLLKQCPSTKTLQQIHTQFTIHSI--HKPN-HLLSQSISLKDFTYSTLIFSHIT 76
Query: 107 PNPDFYSFQVMIR-----WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
P+P+ Y+F +M+R W+ Y + Y M+ +NF F V AC L +
Sbjct: 77 PHPNDYAFNIMLRATTTTWHD----YPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEE 132
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
I HCE+ K+G D + +V MY +C + G +R+VFDE +K++VSW S+++G
Sbjct: 133 IRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSG 192
Query: 221 YVQNDCAQEGLVLFNRMRE--GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
Y + A+E + +F R+RE GF E ++++L S++ AC +L L G+W+ G++++ G++
Sbjct: 193 YAKLGFAREAVEVFGRLREESGF-EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMK 251
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+NS++ +AL+ MY KCG + +R +FD + S D ++W A I Y Q+G D+A+ LF
Sbjct: 252 VNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSM 311
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVI 397
K PN VT+ +VLSA A +G L++G+ + GL+ D V AL+DMYAKC +
Sbjct: 312 KENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSL 371
Query: 398 ADARYIFETTSEKDVIAWNSIISGLDDN-------------------VSPDAVTLVSVIS 438
A+ +F K+ +WN++IS L + P+ +T VS++S
Sbjct: 372 ESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLS 431
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NT 497
AC G V G L + L + + +++ ++ G A V + M EK +
Sbjct: 432 ACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDN 491
Query: 498 VTWSAM 503
VT A+
Sbjct: 492 VTLGAL 497
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 30/384 (7%)
Query: 76 GLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFY 134
GL ND +V+MY G AR VFD + D S+ ++ Y ++ VE +
Sbjct: 147 GLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVF 206
Query: 135 KCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAK 192
+R+ E D VL AC EL D++ G V +V+ G +S++ + L+ MY+K
Sbjct: 207 GRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSK 266
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
C ++ SSR++FD ++ ++W + I+ Y QN A E + LF+ M+E V+ N++TL ++
Sbjct: 267 CGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAV 326
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
++ACA + AL GK + Y G++ + + TAL+DMY KCG++ A+ VF+++ +
Sbjct: 327 LSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKND 386
Query: 313 VSWTAMIVGYTQSGYPDKALKLFT--DKKWADFFPNHVTIASVLSASAQLGNLNMG-RMV 369
SW AMI G +AL LF + PN +T S+LSA G ++ G R+
Sbjct: 387 ASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLF 446
Query: 370 HSLGIRLGL----EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ GL E Y+ +VD+ ++ + +A + E EK
Sbjct: 447 DMMSTLFGLVPKIEHYS---CMVDLLSRAGHLYEAWDVIEKMPEK--------------- 488
Query: 426 VSPDAVTLVSVISACASLGAVQVG 449
PD VTL ++ SAC V +G
Sbjct: 489 --PDNVTLGALHSACQRKKNVDIG 510
>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
Length = 804
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 203/633 (32%), Positives = 347/633 (54%), Gaps = 35/633 (5%)
Query: 77 LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC 136
L N N S+ V R +FD+MP + S+ + WY ++ +E +
Sbjct: 144 LRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVR 203
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKC 193
M + F + A D +++ +VK G D FV++ +DM+++
Sbjct: 204 MLEDGFRPTPVSFVNIFPAAVA-DDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEF 262
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM---REGFVEGNQITLG 250
D+ S+R+VFD KN W +MI GYVQN E + LF+++ RE V + +T
Sbjct: 263 GDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSRE--VPLDVVTFL 320
Query: 251 SLVTACAKLRALHQGKWLHGYILK-IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
S +TA ++ + + G+ LHGY++K + + L AL+ MY +CGN++ A +FD L
Sbjct: 321 SALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPE 380
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
D+V+W M+ + Q+ + + L L + + + F + VT+ +VLSAS+ G+L +G+
Sbjct: 381 KDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQA 440
Query: 370 HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFET--TSEKDVIAWNSIISG------ 421
H IR G+E + + L+DMYAK + A+ +F++ +++D + WN++I+G
Sbjct: 441 HGYLIRHGIEGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQ 500
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVG 469
L+ + P +VTL SV+ AC +G V G +H ++ ++ L +NV+VG
Sbjct: 501 PEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRR-CLDTNVFVG 559
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
TAL++ Y+KCG+ +A VF M K+TVT++ MI G G G G +LALF+ M + ++
Sbjct: 560 TALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLK 619
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
P+ V F + +SAC+++G+V EG + SM F + +H+ C+ DLLA+AGR+EEA E
Sbjct: 620 PDAVTFLSAISACNYSGLVDEGLALYRSM-DSFGISATPQHHCCVADLLAKAGRVEEAYE 678
Query: 590 FMENMPIEPD-VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD--KACYYVLVSNLYAS 646
F+E + E + V+++G+ L C + +L +++ KK+L++ A Y VL+S + A+
Sbjct: 679 FIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAA 738
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
+ W + +R+ M+ RGL K G S + + A
Sbjct: 739 ESNWNSADSLRKEMRARGLKKEAGSSWIKVQNA 771
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 157/578 (27%), Positives = 267/578 (46%), Gaps = 82/578 (14%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVL-TGLVDMYA---KCRD--I 196
D++ +S L AC R + G VH +++ PD+ VL L+++YA + R+ +
Sbjct: 104 DHYTYSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARV 163
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
R++FD +NVVSW ++ YV+ QE L LF RM E ++ ++ A
Sbjct: 164 DVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAA 223
Query: 257 AKLRALHQGKW---LHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSID 311
W L+G ++K G+E + L V++ +DM+ + G+++ AR VFD +
Sbjct: 224 VA----DDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKN 279
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVH 370
W MI GY Q+G +A+ LF+ + P + VT S L+A++Q ++++G+ +H
Sbjct: 280 TEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLH 339
Query: 371 SLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--- 425
I+ VI NALV MY++C + A +F+ EKD++ WN++++ N
Sbjct: 340 GYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFD 399
Query: 426 --------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+ D+VTL +V+SA ++ G +Q+G H Y + G+ + +
Sbjct: 400 LEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEGLE--SY 457
Query: 472 LLNFYAKCGDAQSARMVFDAMR--EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
L++ YAK G + A+ VFD+ + +++ VTW+AMI GY G ++ +F ML ++
Sbjct: 458 LIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLE 517
Query: 530 PNEVIFTTILSACSHTG---MVGEGWKCF-------------------YSMCRDFKFVP- 566
P V ++L AC G G+ CF YS C +
Sbjct: 518 PTSVTLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAEN 577
Query: 567 --------SMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSR 615
S Y M+ L + G ++AL +M ++PD F + + C
Sbjct: 578 VFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGL 637
Query: 616 FDLGEVMIKKM----LELHPDKACYYVLVSNLYASDGR 649
D G + + M + P C V++L A GR
Sbjct: 638 VDEGLALYRSMDSFGISATPQHHC---CVADLLAKAGR 672
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 7/266 (2%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
S+ +L +TG L K H LI G+ + + L+ MY G V+ A+ VFDS
Sbjct: 418 SVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEGLESYLIDMYAKSGRVEMAQRVFDS 477
Query: 106 MPNP--DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL-RDI 162
N D ++ MI Y + + + ++ M + E + + VL AC + +
Sbjct: 478 FKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGV 537
Query: 163 DEGMKVHC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
G ++HC + + + FV T L+DMY+KC +I ++ VF K+ V++T+MI+G
Sbjct: 538 YSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGL 597
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
Q+ ++ L LFN M+E ++ + +T S ++AC + +G L+ + GI
Sbjct: 598 GQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATP 657
Query: 282 HLVTALLDMYVKCGNIRDARSVFDEL 307
+ D+ K G + +A + L
Sbjct: 658 QHHCCVADLLAKAGRVEEAYEFIEGL 683
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 149/314 (47%), Gaps = 32/314 (10%)
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFP---NHVTIASVLSASAQLGNLNMGRMVHSLG 373
A+++ Y ++AL+L A P +H T ++ L+A A+ L +GR VH+
Sbjct: 72 ALLIAYADRALQEEALRLNALLNHAARPPVRSDHYTYSAALTACARSRRLRLGRSVHAHM 131
Query: 374 IRLG--LEDYTVI-NALVDMYAKCHVIADARY-----IFETTSEKDVIAWNSI------- 418
+R L D V+ N+L+++YA +AR +F+ +++V++WN++
Sbjct: 132 LRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKT 191
Query: 419 ----------ISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN-VY 467
+ L+D P V+ V++ A + L+ K G+ N ++
Sbjct: 192 GRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVA-DDPSWPFQLYGLLVKYGVEYINDLF 250
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML-NE 526
V ++ ++ +++ GD QSAR VFD +KNT W+ MI GY G ++ LFS +L +
Sbjct: 251 VVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSR 310
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
EV + V F + L+A S + V G + + + + +V + +R G ++
Sbjct: 311 EVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQT 370
Query: 587 ALEFMENMPIEPDV 600
A + + +P E D+
Sbjct: 371 AFDLFDRLP-EKDI 383
>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
Length = 804
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 203/633 (32%), Positives = 347/633 (54%), Gaps = 35/633 (5%)
Query: 77 LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC 136
L N N S+ V R +FD+MP + S+ + WY ++ +E +
Sbjct: 144 LRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVR 203
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKC 193
M + F + A D +++ +VK G D FV++ +DM+++
Sbjct: 204 MLEDGFRPTPVSFVNIFPAAVA-DDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEF 262
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM---REGFVEGNQITLG 250
D+ S+R+VFD KN W +MI GYVQN E + LF+++ RE V + +T
Sbjct: 263 GDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSRE--VPLDVVTFL 320
Query: 251 SLVTACAKLRALHQGKWLHGYILK-IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
S +TA ++ + + G+ LHGY++K + + L AL+ MY +CGN++ A +FD L
Sbjct: 321 SALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPE 380
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
D+V+W M+ + Q+ + + L L + + + F + VT+ +VLSAS+ G+L +G+
Sbjct: 381 KDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQA 440
Query: 370 HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFET--TSEKDVIAWNSIISG------ 421
H IR G+E + + L+DMYAK + A+ +F++ +++D + WN++I+G
Sbjct: 441 HGYLIRHGIEGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQ 500
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVG 469
L+ + P +VTL SV+ AC +G V G +H ++ ++ L +NV+VG
Sbjct: 501 PEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRR-CLDTNVFVG 559
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
TAL++ Y+KCG+ +A VF M K+TVT++ MI G G G G +LALF+ M + ++
Sbjct: 560 TALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLK 619
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
P+ V F + +SAC+++G+V EG + SM F + +H+ C+ DLLA+AGR+EEA E
Sbjct: 620 PDAVTFLSAISACNYSGLVDEGLALYRSM-DSFGISATPQHHCCVADLLAKAGRVEEAYE 678
Query: 590 FMENMPIEPD-VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD--KACYYVLVSNLYAS 646
F+E + E + V+++G+ L C + +L +++ KK+L++ A Y VL+S + A+
Sbjct: 679 FIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAA 738
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
+ W + +R+ M+ RGL K G S + + A
Sbjct: 739 ESNWNSADSLRKEMRARGLKKEAGSSWIKVQNA 771
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 166/634 (26%), Positives = 289/634 (45%), Gaps = 87/634 (13%)
Query: 94 GHVKYARSVF-DSMPNPDFYSF-QVMIRWYFLNDLYKDIVEFYKCMRKRLK---EHDNFV 148
G + +AR + +++P P ++ Y L ++ + Y + + D++
Sbjct: 48 GRLDHARRLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDHYT 107
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVL-TGLVDMYA---KCRD--IGSSR 200
+S L AC R + G VH +++ PD+ VL L+++YA + R+ + R
Sbjct: 108 YSAALTACARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVR 167
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++FD +NVVSW ++ YV+ QE L LF RM E ++ ++ A
Sbjct: 168 RLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVA-- 225
Query: 261 ALHQGKW---LHGYILKIGIE-INS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
W L+G ++K G+E IN +V++ +DM+ + G+++ AR VFD + W
Sbjct: 226 --DDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVW 283
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSLGI 374
MI GY Q+G +A+ LF+ + P + VT S L+A++Q ++++G+ +H I
Sbjct: 284 NTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLI 343
Query: 375 RLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------- 425
+ VI NALV MY++C + A +F+ EKD++ WN++++ N
Sbjct: 344 KGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGL 403
Query: 426 ----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ D+VTL +V+SA ++ G +Q+G H Y + G+ + + L++
Sbjct: 404 LLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEGLE--SYLIDM 461
Query: 476 YAKCGDAQSARMVFDAMR--EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
YAK G + A+ VFD+ + +++ VTW+AMI GY G ++ +F ML ++P V
Sbjct: 462 YAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSV 521
Query: 534 IFTTILSACSHTG---MVGEGWKCF-------------------YSMCRDFKFVP----- 566
++L AC G G+ CF YS C +
Sbjct: 522 TLASVLPACDPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGG 581
Query: 567 ----SMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLG 619
S Y M+ L + G ++AL +M ++PD F + + C D G
Sbjct: 582 MTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEG 641
Query: 620 EVMIKKM----LELHPDKACYYVLVSNLYASDGR 649
+ + M + P C V++L A GR
Sbjct: 642 LALYRSMDSFGISATPQHHC---CVADLLAKAGR 672
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 7/266 (2%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
S+ +L +TG L K H LI G+ + + L+ MY G V+ A+ VFDS
Sbjct: 418 SVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEGLESYLIDMYAKSGRVEMAQRVFDS 477
Query: 106 MPNP--DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL-RDI 162
N D ++ MI Y + + + ++ M + E + + VL AC + +
Sbjct: 478 FKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGV 537
Query: 163 DEGMKVHC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
G ++HC + + + FV T L+DMY+KC +I ++ VF K+ V++T+MI+G
Sbjct: 538 YSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGL 597
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
Q+ ++ L LFN M+E ++ + +T S ++AC + +G L+ + GI
Sbjct: 598 GQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATP 657
Query: 282 HLVTALLDMYVKCGNIRDARSVFDEL 307
+ D+ K G + +A + L
Sbjct: 658 QHHCCVADLLAKAGRVEEAYEFIEGL 683
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 196/604 (32%), Positives = 318/604 (52%), Gaps = 21/604 (3%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
G + +R +FD M + D S+ +I Y +D Y+ ++ F + + D F+ S
Sbjct: 104 GQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVA 163
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
LKAC +I G +H VK G +S FV + L+DMY K I +VF + +NV
Sbjct: 164 LKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNV 223
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
VSWT++IAG V E L+ F+ M V + T + A A LH GK +H
Sbjct: 224 VSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQ 283
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
+K G + +S ++ L MY KCG +F+++ D+VSWT +I Y Q G + A
Sbjct: 284 TIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHA 343
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDM 390
++ F + ++ PN T A+V+SA A L G +H +RLGL D +V N++V +
Sbjct: 344 VEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTL 403
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNVSPDAVTL 433
Y+K ++ A +F + KD+I+W++II+ D + P+ L
Sbjct: 404 YSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFAL 463
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
SV+S C S+ ++ G +HA+ G+ V +AL++ Y+KCG + A +F+ M+
Sbjct: 464 SSVLSVCGSMALLEQGKQVHAHVLCIGI-DHEAMVHSALISMYSKCGSVEEASKIFNGMK 522
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
N ++W+AMI GY G ++ LF + + ++P+ V F +L+ACSH GMV G+
Sbjct: 523 INNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFY 582
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F M +++ PS +HY C++DLL RAGRL EA + +MP D ++ L C ++
Sbjct: 583 YFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVH 642
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
D G +++L L P+ A ++ ++N+YA+ GRW +R+LMK +G+ K G S
Sbjct: 643 GDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSW 702
Query: 674 VDLD 677
V+++
Sbjct: 703 VNVN 706
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 224/494 (45%), Gaps = 54/494 (10%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
KA H I G NT L +MY G Y +F+ M PD S+ +I Y
Sbjct: 278 KAIHTQTIKQGFDESSFVINT-LATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQ 336
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-V 182
+ VE +K MRK + + F+ V+ AC L G ++H ++++G D+ V
Sbjct: 337 KGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSV 396
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+V +Y+K + S+ VF K+++SW+++IA Y Q A+E + MR
Sbjct: 397 ANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGP 456
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ N+ L S+++ C + L QGK +H ++L IGI+ + + +AL+ MY KCG++ +A
Sbjct: 457 KPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASK 516
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F+ + +++SWTAMI GY + GY +A+ LF P++VT VL+A + G
Sbjct: 517 IFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGM 576
Query: 363 LNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWN 416
+++G M + I E Y I +D+ + +++A ++ + D + W+
Sbjct: 577 VDLGFYYFMLMTNEYQISPSKEHYGCI---IDLLCRAGRLSEAEHMIRSMPCYTDDVVWS 633
Query: 417 SIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT--ALLN 474
++ + +C G V G ++ +Q L GT AL N
Sbjct: 634 TL------------------LRSCRVHGDVDRGR----WTAEQLLRLDPNSAGTHIALAN 671
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN-----EEVQ 529
YA G + A + M+ K G+ + G S +D LN ++
Sbjct: 672 IYAAKGRWKEAAHIRKLMKSK------------GVIKERGWSWVNVNDKLNAFVAGDQAH 719
Query: 530 PNEVIFTTILSACS 543
P TT+L S
Sbjct: 720 PQSEHITTVLELLS 733
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 28/331 (8%)
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+E+NS L VK G + +R +FD++ D +SWT +I GY + +AL LF+
Sbjct: 91 LELNSEL-----KQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFS 145
Query: 337 DKKWAD--FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAK 393
+ W + I+ L A N+ G ++H ++ GL + + +AL+DMY K
Sbjct: 146 N-MWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMK 204
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
I +F+ ++++V++W +II+GL V D+ T
Sbjct: 205 VGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIA 264
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ A A + G ++H + KQG S+ + T L Y KCG A +F+ M+ +
Sbjct: 265 LKASADSSLLHHGKAIHTQTIKQGFDESSFVINT-LATMYNKCGKADYVMRLFEKMKMPD 323
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V+W+ +I Y +G+ ++ F M V PN+ F ++SAC++ + G +
Sbjct: 324 VVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHG 383
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ R V ++ +V L +++G L+ A
Sbjct: 384 HVLR-LGLVDALSVANSIVTLYSKSGLLKSA 413
>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
Length = 1017
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 206/655 (31%), Positives = 336/655 (51%), Gaps = 27/655 (4%)
Query: 47 LPSIPCLNLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSV 102
L S P L L C +++ H+LL+ G + LVSMY + AR +
Sbjct: 145 LSSFPAL--LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 202
Query: 103 FDSMPNP-DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
FD D + ++ Y + + +E ++ M +++ L AC
Sbjct: 203 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 262
Query: 162 IDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
G ++H ++K S +V L+ MY +C + + ++ + + +VV+W S+I
Sbjct: 263 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 322
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GYVQN +E L F+ M + +++++ S++ A +L L G LH Y++K G +
Sbjct: 323 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 382
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
N + L+DMY KC F + DL+SWT +I GY Q+ +AL+LF D
Sbjct: 383 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 442
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
+ + + S+L AS+ L ++ + + +H +R GL D + N LVD+Y KC +
Sbjct: 443 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 502
Query: 400 ARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACAS 442
A +FE+ KDV++W S+IS ++ +S D+V L+ ++SA AS
Sbjct: 503 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 562
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L A+ G +H Y ++G + A+++ YA CGD QSA+ VFD + K + +++
Sbjct: 563 LSALNKGREIHCYLLRKGFCLEGS-IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 621
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI YGM G G ++ LF M +E V P+ + F +L ACSH G++ EG M ++
Sbjct: 622 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 681
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
+ P +HYVC+VD+L RA + EA EF++ M EP ++ A L C +S ++GE+
Sbjct: 682 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 741
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+++LEL P VLVSN++A GRW V +VR MK G+ K PGCS +++D
Sbjct: 742 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 796
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 162/599 (27%), Positives = 280/599 (46%), Gaps = 59/599 (9%)
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VFD MP+ +++ MI Y N + Y MR F +LKAC +LRD
Sbjct: 101 VFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRD 160
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-NVVSWTSMIA 219
I G ++H +VK+G F++ LV MYAK D+ ++R++FD +K + V W S+++
Sbjct: 161 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 220
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
Y + + E L LF M N T+ S +TAC GK +H +LK
Sbjct: 221 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 280
Query: 280 NS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ ++ AL+ MY +CG + A + ++ + D+V+W ++I GY Q+ +AL+ F+D
Sbjct: 281 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 340
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVI 397
A + V++ S+++AS +L NL G +H+ I+ G + + V N L+DMY+KC++
Sbjct: 341 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLT 400
Query: 398 ADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISAC 440
F +KD+I+W ++I+G N + D + L S++ A
Sbjct: 401 CYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRAS 460
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
+ L ++ + +H + ++GLL + + L++ Y KC + A VF++++ K+ V+W
Sbjct: 461 SVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSW 518
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK--CF--- 555
++MI + G+ ++ LF M+ + + V ILSA + + +G + C+
Sbjct: 519 TSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR 578
Query: 556 ----------------YSMCRDFKFVPS---------MKHYVCMVDLLARAGRLEEALEF 590
Y+ C D + + + Y M++ G + A+E
Sbjct: 579 KGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVEL 638
Query: 591 MENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM---LELHPDKACYYVLVSNL 643
+ M + PD F A L+ C D G +K M EL P Y LV L
Sbjct: 639 FDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDML 697
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 178/373 (47%), Gaps = 27/373 (7%)
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS-- 251
R S +VFDE D+ +W +MI YV N L L+ MR VEG + L S
Sbjct: 93 RRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR---VEGVPLGLSSFP 149
Query: 252 -LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
L+ ACAKLR + G LH ++K+G +V AL+ MY K ++ AR +FD
Sbjct: 150 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEK 209
Query: 311 -DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
D V W +++ Y+ SG + L+LF + PN TI S L+A +G+ +
Sbjct: 210 GDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEI 269
Query: 370 HSLGIRLGLE--DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV- 426
H+ ++ + V NAL+ MY +C + A I + DV+ WNS+I G N+
Sbjct: 270 HASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLM 329
Query: 427 ----------------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
D V++ S+I+A L + G LHAY K G SN+ VG
Sbjct: 330 YKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-WDSNLQVGN 388
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
L++ Y+KC F M +K+ ++W+ +I GY +L LF D+ + ++
Sbjct: 389 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 448
Query: 531 NEVIFTTILSACS 543
+E+I +IL A S
Sbjct: 449 DEMILGSILRASS 461
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 14/177 (7%)
Query: 479 CGD--AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
CG A S VFD M ++ W+ MIG Y G+ +LAL+ +M E V F
Sbjct: 90 CGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 149
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L AC+ + G + +S+ + + +V + A+ L A +
Sbjct: 150 ALLKACAKLRDIRSGSE-LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 208
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH-----PDKACYYVLVSNLYASDG 648
+ D L+ + L YS ++ E+H P+ Y +VS L A DG
Sbjct: 209 KGDAVLWNSILSS---YSTSGKSLETLELFREMHMTGPAPNS---YTIVSALTACDG 259
>gi|357148978|ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 598
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 317/586 (54%), Gaps = 29/586 (4%)
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLK------EHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
W L L + +C+R + D F + K+C LR G VH
Sbjct: 12 HWNRLIQLAAASGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCSVHAHA 71
Query: 173 VKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+ VG D FVLT L+DMYAKC + +R++FDE ++SW M+ Y ++ C E +
Sbjct: 72 LLVGAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSCVTEAV 131
Query: 232 VLFNRMREGFVEGNQITLGSLVTA-CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+FN MR V + TL L++ L + G L+GY +K G++ + ++ ++L M
Sbjct: 132 AMFNTMRGVGVRPSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGLDTDLPVLNSVLTM 191
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
V+ G + DA +FD + +V+W+AM+ G+ Q+G K LF + A + + V +
Sbjct: 192 LVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTAGYKFDSVAL 251
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE 409
+++SA+ LGNL + + VH+L I+ G E + ++++LV++YAKC + A+ +F+
Sbjct: 252 VNLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQEVFDAVHR 311
Query: 410 KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
K+V+ W S+ISG L +V P+ T+ SV+SACA+LG+ +
Sbjct: 312 KNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANLGSANQAKKV 371
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT--VTWSAMIGGYGMQ 510
+ GL ++ V T L++ Y KCG+ AR +FD + N WSAMI GY
Sbjct: 372 EDHVVAIGL-QKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSAMINGYACI 430
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G+G +L LF++M N+ VQP+ ++FT +L+AC+++G+V EG +CF S+ ++ PS++H
Sbjct: 431 GEGSEALVLFNEMQNQGVQPDAIVFTHLLTACNYSGLVDEGLQCFRSLTVEYGIEPSIEH 490
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y+C +DLL +AG L A EF +PI+ + L + E++ +++L L
Sbjct: 491 YMCTIDLLCKAGHLSAAKEFFRKIPIQLQNQVLAPILTAYSAHCADSSIELVSEELLNLE 550
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P + + VL++N+ G+W + R L+ ++GL K PG S +++
Sbjct: 551 PHNSDHCVLMANMLNCLGKWKKATDYRRLITKQGLVKEPGRSCIEM 596
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/404 (30%), Positives = 204/404 (50%), Gaps = 25/404 (6%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HALL+ G +D T L+ MY + AR +FD MP+P S+ M+ Y +
Sbjct: 70 HALLV--GAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSCV 127
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCE-LRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+ V + MR +L + L + G+ ++ +K G D VL
Sbjct: 128 TEAVAMFNTMRGVGVRPSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGLDTDLPVLNS 187
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
++ M + + + +FD +K+VV+W++M++G++Q + LFN M+ + +
Sbjct: 188 VLTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTAGYKFD 247
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ L +L++A L L K +H ++K G E L+++L+++Y KCG++ A+ VFD
Sbjct: 248 SVALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQEVFD 307
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ ++V WT+MI GY + G+PDKALK+F D PN T++SVLSA A LG+ N
Sbjct: 308 AVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANLGSANQ 367
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE--TTSEKDVIAWNSIISGL 422
+ V + +GL+ D V L+D Y KC + AR IF+ TT+ +D+ W+++I+G
Sbjct: 368 AKKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSAMINGY 427
Query: 423 -----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
+ V PDA+ +++AC G V G
Sbjct: 428 ACIGEGSEALVLFNEMQNQGVQPDAIVFTHLLTACNYSGLVDEG 471
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 314/623 (50%), Gaps = 21/623 (3%)
Query: 74 VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEF 133
++GL + + LV Y S G + A +V +P S+ ++ Y + Y+ ++
Sbjct: 180 LNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMII 239
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
+ + E + VLK C EL G VH ++K G D+ + + LV+MY++
Sbjct: 240 IEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSR 299
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
C + +VF + +VV ++MI+ + ++D A E L LF +M V+ N +
Sbjct: 300 CLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGI 359
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
++ + + +H YI+K G + + A+L+MYVK G ++DA FD + D
Sbjct: 360 AGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDT 419
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
SW ++ + ++ L++F F N T SVL L NL G VH+
Sbjct: 420 FSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHAC 479
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------- 421
++ GL+ D V LVDMYA+ A +FE E+D +W I+SG
Sbjct: 480 ILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKV 539
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
L +N+ P TL +S C+ + ++ G LH+++ K G SS V AL++
Sbjct: 540 VEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSS--VVSGALVD 597
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y KCG+ A M+F ++ V W+ +I GY G G +L F M++E +P+ +
Sbjct: 598 MYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVDEGKRPDGIT 657
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
F +LSACSH G++ EG K F S+ + P+M+HY CMVD+L++AGRL EA + M
Sbjct: 658 FVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQM 717
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
P+ PD S++ L C ++ ++ E +++ EL P A +L+SN+YA GRW V
Sbjct: 718 PLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNIYADLGRWSDVT 777
Query: 655 QVRELMKQRGLSKSPGCSLVDLD 677
+VR ++ G+ K PGCS ++++
Sbjct: 778 RVRNILLDHGVKKEPGCSWIEIN 800
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/506 (26%), Positives = 245/506 (48%), Gaps = 21/506 (4%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HA L+ L D L++MY G + AR VFD MP+ D ++ MI +
Sbjct: 70 QELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAA 129
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVL 183
++ + M + + F + VLKAC +VH ++VK+ G D +V
Sbjct: 130 GDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLDDPYVG 189
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ LV+ Y C ++ ++ V +++ VSW +++ GY ++ + +++ ++ E
Sbjct: 190 SSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIEKLVASGDE 249
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
++ TL +++ C +L G+ +H ++K G+E ++ L + L++MY +C + +A V
Sbjct: 250 ISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEV 309
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F + D+V +AMI + + +AL LF PNH + +++ G+
Sbjct: 310 FIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDA 369
Query: 364 NMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-- 420
N+ R VH+ ++ G V +A+++MY K + DA F+ E D +WN+I+S
Sbjct: 370 NLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAF 429
Query: 421 --------GLD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
GL + S + T VSV+ C SL ++ G+ +HA K G L ++
Sbjct: 430 YSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSG-LQND 488
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
V L++ YA+ G SA +VF+ ++E++ +W+ ++ GY + + F ML
Sbjct: 489 TDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLR 548
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEG 551
E ++P++ LS CS +G G
Sbjct: 549 ENIRPSDATLAVSLSVCSDMASLGSG 574
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 200/415 (48%), Gaps = 20/415 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
+ + L+ C R + G ++H +++ PD+F+L L++MY KC + +R+VFD
Sbjct: 52 LHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGM 111
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+++V+WT+MI+ + + + L +F RM + + N TL S++ AC+
Sbjct: 112 PHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTH 171
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG ++K+ + ++ ++L++ Y CG + A +V L VSW A++ GY + G
Sbjct: 172 QVHGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHG 231
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA 386
+ + + + + T+ +VL +LG G+ VH+ I+ GLE V+N+
Sbjct: 232 DYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNS 291
Query: 387 -LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSP 428
LV+MY++C +A +F E DV+ +++IS D + V P
Sbjct: 292 CLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKP 351
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
+ V + + G + S+HAY K G VG A+LN Y K G Q A +
Sbjct: 352 NHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLK-GVGDAILNMYVKVGAVQDATVT 410
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
FD + E +T +W+ ++ + + L +F M E N+ + ++L C+
Sbjct: 411 FDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCT 465
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/309 (33%), Positives = 157/309 (50%), Gaps = 19/309 (6%)
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA R L +G+ LH +L+ + ++ L+ +LL+MY KCG + DAR VFD + D+V+W
Sbjct: 60 CAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDIVAW 119
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
TAMI +T +G D+AL +F PN T+ASVL A + + VH ++
Sbjct: 120 TAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVK 179
Query: 376 L-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
L GL+D V ++LV+ Y C + A + E+ ++WN++++G +
Sbjct: 180 LNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMII 239
Query: 426 -----VSPDAV---TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
S D + TL +V+ C LG + G S+HA K+GL + NV + + L+ Y+
Sbjct: 240 IEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNV-LNSCLVEMYS 298
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
+C A+ A VF + E + V SAMI + +L LF M V+PN IF
Sbjct: 299 RCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVG 358
Query: 538 ILSACSHTG 546
I S TG
Sbjct: 359 IAGVASRTG 367
>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
Length = 674
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 203/633 (32%), Positives = 347/633 (54%), Gaps = 35/633 (5%)
Query: 77 LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC 136
L N N S+ V R +FD+MP + S+ + WY ++ +E +
Sbjct: 14 LRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVR 73
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKC 193
M + F + A D +++ +VK G D FV++ +DM+++
Sbjct: 74 MLEDGFRPTPVSFVNIFPAAVA-DDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEF 132
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM---REGFVEGNQITLG 250
D+ S+R+VFD KN W +MI GYVQN E + LF+++ RE V + +T
Sbjct: 133 GDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSRE--VPLDVVTFL 190
Query: 251 SLVTACAKLRALHQGKWLHGYILK-IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
S +TA ++ + + G+ LHGY++K + + L AL+ MY +CGN++ A +FD L
Sbjct: 191 SALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPE 250
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
D+V+W M+ + Q+ + + L L + + + F + VT+ +VLSAS+ G+L +G+
Sbjct: 251 KDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQA 310
Query: 370 HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFET--TSEKDVIAWNSIISG------ 421
H IR G+E + + L+DMYAK + A+ +F++ +++D + WN++I+G
Sbjct: 311 HGYLIRHGIEGEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQ 370
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVG 469
L+ + P +VTL SV+ AC +G V G +H ++ ++ L +NV+VG
Sbjct: 371 PEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQIHCFAVRR-CLDTNVFVG 429
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
TAL++ Y+KCG+ +A VF M K+TVT++ MI G G G G +LALF+ M + ++
Sbjct: 430 TALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGLGQHGFGKKALALFNSMQEKGLK 489
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
P+ V F + +SAC+++G+V EG + SM F + +H+ C+ DLLA+AGR+EEA E
Sbjct: 490 PDAVTFLSAISACNYSGLVDEGLALYRSM-DSFGISATPQHHCCVADLLAKAGRVEEAYE 548
Query: 590 FMENMPIEPD-VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD--KACYYVLVSNLYAS 646
F+E + E + V+++G+ L C + +L +++ KK+L++ A Y VL+S + A+
Sbjct: 549 FIEGLGEEGNFVAIWGSLLASCKAQGKQELAKLVTKKLLDIEKQYGHAGYSVLLSQVLAA 608
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
+ W + +R+ M+ RGL K G S + + A
Sbjct: 609 ESNWNSADSLRKEMRARGLKKEAGSSWIKVQNA 641
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 127/266 (47%), Gaps = 7/266 (2%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
S+ +L +TG L K H LI G+ + + L+ MY G V+ A+ VFDS
Sbjct: 288 SVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEGEGLESYLIDMYAKSGRVEMAQRVFDS 347
Query: 106 MPNP--DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL-RDI 162
N D ++ MI Y + + + ++ M + E + + VL AC + +
Sbjct: 348 FKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGV 407
Query: 163 DEGMKVHC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
G ++HC + + + FV T L+DMY+KC +I ++ VF K+ V++T+MI+G
Sbjct: 408 YSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTYTTMISGL 467
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
Q+ ++ L LFN M+E ++ + +T S ++AC + +G L+ + GI
Sbjct: 468 GQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSMDSFGISATP 527
Query: 282 HLVTALLDMYVKCGNIRDARSVFDEL 307
+ D+ K G + +A + L
Sbjct: 528 QHHCCVADLLAKAGRVEEAYEFIEGL 553
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/546 (34%), Positives = 315/546 (57%), Gaps = 29/546 (5%)
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
+K C LR + +H ++V G D FV + +++ +A + G + E + +
Sbjct: 12 IKDCKNLRIFRQ---IHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDYACDYLEQGNTRL 68
Query: 212 VSW--TSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWL 268
S+ S+I GYV + Q + ++ RM R+GFV + T L+ AC+ +G+ +
Sbjct: 69 GSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVP-DMFTFPVLLKACSNFSGSREGRQV 127
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
HG ++K+G+ + ++ +L+ Y CG+ A VFDE+ D+VSW ++I G+ ++G+
Sbjct: 128 HGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHF 187
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALV 388
D+A+ +F D P+ T+ SVL+A A+ G+L G+ +H + R + + NA++
Sbjct: 188 DEAISVFFR---MDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAML 244
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAV 431
DMY K +A+ IF+ +D+++W +I+GL + +SPDA+
Sbjct: 245 DMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAI 304
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
L SV+SACASLG + G+ +H Y ++G+ ++++GTA+++ YAKCG + A +F +
Sbjct: 305 ILTSVLSACASLGTLDFGTWVHEYINQRGI-KWDIHIGTAIVDMYAKCGCIEMALKIFYS 363
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
M ++NT TW+A++ G M G +L LF M+ V+PNE+ F IL+AC H G+V EG
Sbjct: 364 MSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEG 423
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCG 611
K F +M + + +P ++HY CM+DL RAG LEEA+E MP++PDV ++G L+ C
Sbjct: 424 RKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACT 483
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 671
+L + +LEL D + +VL+SN+ A + RW V ++R LMK RG+ K+PG
Sbjct: 484 TVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGS 543
Query: 672 SLVDLD 677
S++++D
Sbjct: 544 SVIEVD 549
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/415 (33%), Positives = 217/415 (52%), Gaps = 30/415 (7%)
Query: 59 CKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF----YS 113
CK+ + HA L+ GL +D +K++ + +F V+Y D + + +
Sbjct: 15 CKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFANF--VEYGDYACDYLEQGNTRLGSFP 72
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
F +I Y + + V Y+ M + D F F +LKAC EG +VH +V
Sbjct: 73 FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
K+G D +V L+ Y C D + +VFDE L ++VVSW S+I+G+++ E +
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
+F RM VE + TL S++ ACA+ L GK +HG I + ++N L A+LDMYV
Sbjct: 193 VFFRMD---VEPSMTTLVSVLAACARNGDLCTGKGIHGVIER-RFKVNLVLGNAMLDMYV 248
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K G +A+++FDEL + D+VSWT MI G QS +P ++L+LF+ + P+ + + S
Sbjct: 249 KNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTS 308
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
VLSA A LG L+ G VH + G++ D + A+VDMYAKC I A IF + S+++
Sbjct: 309 VLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRN 368
Query: 412 VIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
WN+++ GL V P+ +T +++++AC G V G
Sbjct: 369 TFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEG 423
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 151/370 (40%), Gaps = 51/370 (13%)
Query: 36 ELDQTFASFHSL---PSIPCL-NLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVS 88
D+ + F + PS+ L ++L C G L K H ++ N ++
Sbjct: 186 HFDEAISVFFRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRFKVNLVLGNAMLD 245
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MY G A+++FD +P D S+ +MI +D K +E + MR D +
Sbjct: 246 MYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAII 305
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ VL AC L +D G VH I + G D + T +VDMYAKC I + ++F
Sbjct: 306 LTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMS 365
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+N +W +++ G + E L LF M V+ N+IT +++TAC
Sbjct: 366 QRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACC---------- 415
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-----DLVSWTAMIVGY 322
CG + + R FD + + L + MI +
Sbjct: 416 -------------------------HCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLF 450
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
++G ++A++L + P+ + +L+A +GN+ + + + L +D
Sbjct: 451 CRAGLLEEAVEL---ARTMPMKPDVLIWGLLLNACTTVGNIELSHRIQDYILELDHDDSG 507
Query: 383 VINALVDMYA 392
V L ++ A
Sbjct: 508 VFVLLSNISA 517
>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
Length = 960
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 206/655 (31%), Positives = 336/655 (51%), Gaps = 27/655 (4%)
Query: 47 LPSIPCLNLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSV 102
L S P L L C +++ H+LL+ G + LVSMY + AR +
Sbjct: 182 LSSFPAL--LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 103 FDSMPNP-DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
FD D + ++ Y + + +E ++ M +++ L AC
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 162 IDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
G ++H ++K S +V L+ MY +C + + ++ + + +VV+W S+I
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GYVQN +E L F+ M + +++++ S++ A +L L G LH Y++K G +
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
N + L+DMY KC F + DL+SWT +I GY Q+ +AL+LF D
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
+ + + S+L AS+ L ++ + + +H +R GL D + N LVD+Y KC +
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 539
Query: 400 ARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACAS 442
A +FE+ KDV++W S+IS ++ +S D+V L+ ++SA AS
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L A+ G +H Y ++G + A+++ YA CGD QSA+ VFD + K + +++
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGS-IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI YGM G G ++ LF M +E V P+ + F +L ACSH G++ EG M ++
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
+ P +HYVC+VD+L RA + EA EF++ M EP ++ A L C +S ++GE+
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+++LEL P VLVSN++A GRW V +VR MK G+ K PGCS +++D
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 833
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 278/553 (50%), Gaps = 30/553 (5%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KLV MYG G + A VFD MP+ +++ MI Y N + Y MR
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
F +LKAC +LRDI G ++H +VK+G F++ LV MYAK D+ ++R++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 204 DETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
D +K + V W S+++ Y + + E L LF M N T+ S +TAC
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 263 HQGKWLHGYILKIGIEINS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
GK +H +LK + ++ AL+ MY +CG + A + ++ + D+V+W ++I G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Y Q+ +AL+ F+D A + V++ S+++AS +L NL G +H+ I+ G + +
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V N L+DMY+KC++ F +KD+I+W ++I+G N
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ D + L S++ A + L ++ + +H + ++GLL + + L++ Y KC +
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMG 538
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A VF++++ K+ V+W++MI + G+ ++ LF M+ + + V ILSA +
Sbjct: 539 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 544 HTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA---LEFMENMPIEPD 599
+ +G + Y + + F S+ V +VD+ A G L+ A + +E +
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 600 VSLFGAF-LHGCG 611
S+ A+ +HGCG
Sbjct: 657 TSMINAYGMHGCG 669
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 203/422 (48%), Gaps = 31/422 (7%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPD---SFVLTGLVDMYAKCRDIGSSRQVFD 204
F+ VL+ C + R + +G ++H I K P F+ LV MY KC + + +VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTF-PSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS---LVTACAKLRA 261
E D+ +W +MI YV N L L+ MR VEG + L S L+ ACAKLR
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR---VEGVPLGLSSFPALLKACAKLRD 197
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-DLVSWTAMIV 320
+ G LH ++K+G +V AL+ MY K ++ AR +FD D V W +++
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
Y+ SG + L+LF + PN TI S L+A +G+ +H+ ++
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV------------ 426
+ V NAL+ MY +C + A I + DV+ WNS+I G N+
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 427 -----SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
D V++ S+I+A L + G LHAY K G SN+ VG L++ Y+KC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-WDSNLQVGNTLIDMYSKCNL 436
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
F M +K+ ++W+ +I GY +L LF D+ + ++ +E+I +IL A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 542 CS 543
S
Sbjct: 497 SS 498
>gi|296088310|emb|CBI36755.3| unnamed protein product [Vitis vinifera]
Length = 751
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 190/551 (34%), Positives = 313/551 (56%), Gaps = 28/551 (5%)
Query: 141 LKEHDNFVFSKVLKACCELRDIDE--GMKVHCEIVKVGGPDSFVLTGLVDM--YAKCRDI 196
+K+H N + S +L+ C + ++ G+ + +++ D L+ LVD Y+ ++
Sbjct: 1 MKKHYNSILS-LLEKCKTMAELKRLHGLMITTSVIQ----DVIPLSRLVDFCAYSDSGNL 55
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
++ VF++ ++ W SMI GY ++ E L ++ MR+ + T ++ AC
Sbjct: 56 NYAKSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKAC 115
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ + + G+ +H I+K G E++ + TALL MY CG++ A VFD++ ++V+WT
Sbjct: 116 SLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWT 175
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++I G + P +A++++ D + PN +T+ +VL A A+ +LN GR VH ++
Sbjct: 176 SLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQM 235
Query: 377 GLE------DYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP 428
GL+ ++ VI A+VDMYAKC A + +E + + I+G D P
Sbjct: 236 GLDPFQSNSNFNVILATAIVDMYAKC-----AYNQYGQANEALDLFSDMRIAGFD----P 286
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D T + VI ACA LGA+ G +LHAY +K L + + +GTAL++ YAK GDA+ A+ V
Sbjct: 287 DKATFLCVIGACAHLGALVSGQALHAYVSKTNL-TDDTAIGTALVDMYAKSGDAERAQQV 345
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQPNEVIFTTILSACSHTGM 547
F +++K+ W+++I G M G G +L F M + + P+E+ + +LSACSH G
Sbjct: 346 FSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSHVGK 405
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V +G F SM P+ +HY CMVDLL+RAGRL EA +E MP+EP+ +++ A L
Sbjct: 406 VEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALL 465
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
+GC +Y D+ + + +++ EL D + YVL+SN+YA RW V RELMK+R + K
Sbjct: 466 NGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELMKERKIQK 525
Query: 668 SPGCSLVDLDI 678
S G S V++ +
Sbjct: 526 SLGHSSVEMKM 536
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 246/488 (50%), Gaps = 63/488 (12%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCN-TKLVSM--YGSFGHVKYARSVFDSMPNP 109
L+LL CK+ LK H L+I + D ++LV Y G++ YA+SVF+ + P
Sbjct: 9 LSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDRP 68
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
Y + MI+ Y +++ + + Y+ MR++ D+F F VLKAC + + G VH
Sbjct: 69 SLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCVH 128
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
IVK G D + T L+ MYA C D+ ++ +VFD+ NVV+WTS+IAG + NDC
Sbjct: 129 NCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPS 188
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE-------INS 281
E + ++ M V N+IT+ +++ ACA+ R L+ G+W+H ++G++ N
Sbjct: 189 EAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNV 248
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
L TA++DMY KC Y Q G ++AL LF+D + A
Sbjct: 249 ILATAIVDMYAKC--------------------------AYNQYGQANEALDLFSDMRIA 282
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADA 400
F P+ T V+ A A LG L G+ +H+ + L D T I ALVDMYAK A
Sbjct: 283 GFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAERA 342
Query: 401 RYIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACAS 442
+ +F +KDV AW S+I GL D + PD +T + V+SAC+
Sbjct: 343 QQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACSH 402
Query: 443 LGAVQVGSSLHAYSTK--QGLLSSNVYVG--TALLNFYAKCGDAQSARMVFDAMREKNTV 498
+G V+ G + H S K G+ + + G LL+ + G+A+ R+V E NT
Sbjct: 403 VGKVEDGKN-HFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAE--RLVEKMPVEPNTA 459
Query: 499 TWSAMIGG 506
WSA++ G
Sbjct: 460 IWSALLNG 467
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 298/540 (55%), Gaps = 31/540 (5%)
Query: 158 ELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGS---SRQVFDETLDKNVVSW 214
+L+ I M C V D F + +V + D GS +R VF++ + +
Sbjct: 55 QLKQIHAQMLRTCLFV-----DPFSASKIV-AFCALHDSGSLPYARLVFNQIPNPTTFTC 108
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
S+I GY + ++ ++ + M ++ ++ T SL +C L +GK LH + K
Sbjct: 109 NSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQLHCHSTK 165
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
+G ++++ L++MY CG + AR VFD++ + +VSW MI Y Q P +A+KL
Sbjct: 166 LGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKL 225
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAK 393
F + A PN +T+ +VL+A A+ +L + VH G+ +TV+ +AL+D+Y K
Sbjct: 226 FRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCK 285
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISG-LDDN----------------VSPDAVTLVSV 436
C AR +F EK++ WN +I+G ++D+ V D VT+ S+
Sbjct: 286 CGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASL 345
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ AC LGA+++G LH Y K+ + +V +GTAL++ YAKCG +SA VF M EK+
Sbjct: 346 LIACTHLGALELGKWLHVYIEKEKI-EVDVALGTALVDMYAKCGSIESAMRVFQEMPEKD 404
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
+TW+A+I G M G G +L LF +M EV+P+ + F +L+ACSH G+V EG F
Sbjct: 405 VMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFN 464
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
SM + PS++HY CMVD+L RAGR+ EA + ++NMP+ PD + L C ++
Sbjct: 465 SMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNL 524
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ E ++++EL P YVL+SN+Y+S W ++RELM +R + K PGCS +++
Sbjct: 525 VVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEV 584
Score = 248 bits (632), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 245/465 (52%), Gaps = 27/465 (5%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSF---GHVKYARSVFDSMP 107
PCL L C + LK HA ++ L D + + + + G + YAR VF+ +P
Sbjct: 42 PCLLSLEKCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIP 101
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
NP ++ +IR Y +L + + FY+ M + + D F F + K+C L EG +
Sbjct: 102 NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVL---CEGKQ 158
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+HC K+G D+++ L++MY+ C + S+R+VFD+ ++K+VVSW +MI Y Q D
Sbjct: 159 LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDL 218
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E + LF RM V+ N+ITL +++TACA+ R L K +H YI + GI ++ L +A
Sbjct: 219 PHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSA 278
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+D+Y KCG AR +F+++ +L W MI G+ + ++AL LF + + + +
Sbjct: 279 LMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGD 338
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
VT+AS+L A LG L +G+ +H + +E D + ALVDMYAKC I A +F+
Sbjct: 339 KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQ 398
Query: 406 TTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQV 448
EKDV+ W ++I GL V PDA+T V V++AC+ G V
Sbjct: 399 EMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNE 458
Query: 449 G-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
G + ++ K G+ S + G +++ + G A + M
Sbjct: 459 GIAYFNSMPNKYGIQPSIEHYG-CMVDMLGRAGRIAEAEDLIQNM 502
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 151/482 (31%), Positives = 233/482 (48%), Gaps = 35/482 (7%)
Query: 26 YTNQQTPTQHELDQTFASFHSL-PSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK 81
YTN+ P Q L L P L KS G L K H G +D
Sbjct: 115 YTNKNLPRQAILFYQLMMLQGLDPDR--FTFPSLFKSCGVLCEGKQLHCHSTKLGFASDA 172
Query: 82 -CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
L++MY + G + AR VFD M N S+ MI Y DL + ++ ++ M
Sbjct: 173 YIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIA 232
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
+ + VL AC RD++ +VH I + G G + + + L+D+Y KC +
Sbjct: 233 SVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLA 292
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R +F++ +KN+ W MI G+V++ +E L LFN M+ V+G+++T+ SL+ AC L
Sbjct: 293 RDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHL 352
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
AL GKWLH YI K IE++ L TAL+DMY KCG+I A VF E+ D+++WTA+I
Sbjct: 353 GALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALI 412
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGI 374
VG G KAL+LF + + ++ P+ +T VL+A + G +N G M + GI
Sbjct: 413 VGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGI 472
Query: 375 RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV 434
+ +E Y +VDM + IA+A + + ++PD LV
Sbjct: 473 QPSIEHY---GCMVDMLGRAGRIAEAEDLIQNMP-----------------MAPDYFVLV 512
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
++SAC G + V + + YV L N Y+ + ++A+ + + M E
Sbjct: 513 GLLSACRIHGNLVVAERAAQQLIELDPKNGGTYV--LLSNIYSSMKNWEAAKKMRELMVE 570
Query: 495 KN 496
+N
Sbjct: 571 RN 572
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 272/467 (58%), Gaps = 22/467 (4%)
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L L+++M+ + N T + ACA L + + H + K+G++ + H V +++ M
Sbjct: 102 LHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTM 161
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVT 349
Y +CG AR VFDE+ DLVSW +++ GY + G+ +A+++F ++ + F P+ ++
Sbjct: 162 YFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMS 221
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTS 408
+ SVL A +LG+L +GR V + G++ + I +AL+ MY+KC + +R IF+
Sbjct: 222 LVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMP 281
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+D I WN+ IS N V P+ VTL +V+SACAS+GA+ +G
Sbjct: 282 SRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQ 341
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+ Y+T +GL +++V TAL++ YAKCG +SA+ VF+ M KN +W+AMI G
Sbjct: 342 MDEYATHRGL-QHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHG 400
Query: 512 DGGGSLALFSDMLNE--EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
+L+LF M +E +PN++ F ++LSAC H G+V EG++ F M F VP ++
Sbjct: 401 KAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIE 460
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVDLL+RAG L EA + +E MP +PD GA C D+GE +I+ +LEL
Sbjct: 461 HYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLEL 520
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P + Y++ S +Y + W ++R LM++ G++K+PGCS +++
Sbjct: 521 DPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEV 567
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 251/486 (51%), Gaps = 38/486 (7%)
Query: 48 PSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSM- 106
P L+LL C ST +L+ H + + L+S S Y+ +F +
Sbjct: 20 PIFLLLSLLKQCPSTKTLQQIHTQFTIHSIHKPN---HLLSQSISLKDFTYSTLIFSHIT 76
Query: 107 PNPDFYSFQVMIR-----WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
P+P+ Y+F +M+R W+ Y + Y M+ +NF F V AC L +
Sbjct: 77 PHPNDYAFNIMLRATTTTWHD----YPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEE 132
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
I HCE+ K+G D + +V MY +C + G +R+VFDE +K++VSW S+++G
Sbjct: 133 IRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSG 192
Query: 221 YVQNDCAQEGLVLFNRMRE--GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
Y + A+E + +F R+RE GF E ++++L S++ AC +L L G+W+ G++++ G++
Sbjct: 193 YAKLGFAREAVEVFGRLREESGF-EPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMK 251
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+NS++ +AL+ MY KCG + +R +FD + S D ++W A I Y Q+G D+A+ LF
Sbjct: 252 VNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSM 311
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVI 397
K PN VT+ +VLSA A +G L++G+ + GL+ D V AL+DMYAKC +
Sbjct: 312 KENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSL 371
Query: 398 ADARYIFETTSEKDVIAWNSIISGLDDN-------------------VSPDAVTLVSVIS 438
A+ +F K+ +WN++IS L + P+ +T VS++S
Sbjct: 372 ESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLS 431
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NT 497
AC G V G L + L + + +++ ++ G A V + M EK +
Sbjct: 432 ACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDN 491
Query: 498 VTWSAM 503
VT A+
Sbjct: 492 VTLGAL 497
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 193/384 (50%), Gaps = 30/384 (7%)
Query: 76 GLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFY 134
GL ND +V+MY G AR VFD + D S+ ++ Y ++ VE +
Sbjct: 147 GLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVF 206
Query: 135 KCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAK 192
+R+ E D VL AC EL D++ G V +V+ G +S++ + L+ MY+K
Sbjct: 207 GRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSK 266
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
C ++ SSR++FD ++ ++W + I+ Y QN A E + LF+ M+E V+ N++TL ++
Sbjct: 267 CGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAV 326
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
++ACA + AL GK + Y G++ + + TAL+DMY KCG++ A+ VF+++ +
Sbjct: 327 LSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKND 386
Query: 313 VSWTAMIVGYTQSGYPDKALKLFT--DKKWADFFPNHVTIASVLSASAQLGNLNMG-RMV 369
SW AMI G +AL LF + PN +T S+LSA G ++ G R+
Sbjct: 387 ASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLF 446
Query: 370 HSLGIRLGL----EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ GL E Y+ +VD+ ++ + +A + E EK
Sbjct: 447 DMMSTLFGLVPKIEHYS---CMVDLLSRAGHLYEAWDVIEKMPEK--------------- 488
Query: 426 VSPDAVTLVSVISACASLGAVQVG 449
PD VTL ++ SAC V +G
Sbjct: 489 --PDNVTLGALHSACQRKKNVDIG 510
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 205/651 (31%), Positives = 348/651 (53%), Gaps = 32/651 (4%)
Query: 66 KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFL 123
K+ HA LI G + ++ Y G A VF+SM D S+ ++I +
Sbjct: 67 KSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLD 126
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
N + ++ R E + V++AC L +G+ +H ++K G S V
Sbjct: 127 NGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSV 186
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGF 241
L+ MY D+ +R++FDE +K+V++W+ MI GY+Q + Q GL +F +M
Sbjct: 187 QNSLLSMYVDA-DMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPG 245
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+E + + + S++ ACA R + G+ +HG ++ G + + + +L+DMY KC + A
Sbjct: 246 IEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAF 305
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF+E+ + VSW +M+ G+ + +A L + + + VT+ ++L
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+ + +H + IR G E + V++AL+D YAKC++I A +F +DV++W+++IS
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G D V P+ +T+++++ AC+ ++ H + +QG +
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGF-A 484
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
S V VGTA+++ Y+KCG+ ++R FD + KN VTWSAMI YGM G +LALF++M
Sbjct: 485 SEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEM 544
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
++PN V ++L+ACSH G+V EG F SM ++ P +HY CMVD+L RAG+
Sbjct: 545 KRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGK 604
Query: 584 LEEALEFMENMP--IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
L+ A+E ++ MP ++ S++G+ L C Y +LG+ I ++LEL P + Y++ S
Sbjct: 605 LDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVAS 664
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSR 686
++YA+DG W ++R L K++G+ G SLV +D +A D S R
Sbjct: 665 SMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPR 715
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 175/355 (49%), Gaps = 28/355 (7%)
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+W I N QE + ++ +++ ++ +++ + + GK LH +
Sbjct: 14 NWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACL 73
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGYTQSGYPDKA 331
+K G + + + +++ Y++CG+ A VF+ + S D VSW +I G+ +G
Sbjct: 74 IKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAG 133
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDM 390
L FT+ + A F PN T+ V+ A LG + G ++H I+ G +V N+L+ M
Sbjct: 134 LWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSM 193
Query: 391 YAKCHVIAD---ARYIFETTSEKDVIAWNSIISG------------------LDDNVSPD 429
Y V AD AR +F+ EKDVIAW+ +I G L + PD
Sbjct: 194 Y----VDADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
V +VSV+ ACAS V G +H +G +++V +L++ Y+KC DA SA VF
Sbjct: 250 GVVMVSVLKACASSRDVCTGRLVHGLVIHRG-FDCDLFVENSLIDMYSKCKDAGSAFKVF 308
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
+ + ++N V+W++M+ G+ + + + +L S M E V+ +EV IL C +
Sbjct: 309 NEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 178/530 (33%), Positives = 294/530 (55%), Gaps = 54/530 (10%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF+ + N + W M G+ + L L+ M + N T L+ +CAK +
Sbjct: 31 VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD---------------- 305
+G+ +HG++LK+G +++ ++ T+L+ MY + G + DA+ VFD
Sbjct: 91 FKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITG 150
Query: 306 ---------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
E+ D+VSW AMI GY ++G KAL+LF + + P+ T+
Sbjct: 151 YASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTM 210
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSE 409
A+V+SA AQ G++ +GR VHS G + ++NAL+D+Y+KC + A + E S
Sbjct: 211 ATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSN 270
Query: 410 KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
KDVI+WN++I G L +P+ VT++S++ ACA LGA+ +G +
Sbjct: 271 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWI 330
Query: 453 HAYSTKQ--GLLSSNVY-VGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYG 508
H Y K+ G++ +N + T+L++ YAKCGD +A V D+ ++ TW+AMI G+
Sbjct: 331 HVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFA 390
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
M G + +FS M ++P+++ F +LSACSH+GM+ G F SM +D+ P +
Sbjct: 391 MHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKL 450
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY CM+DLL +G +EA E + MP+EPD ++ + L C ++ +LGE KK+++
Sbjct: 451 EHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK 510
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS-PGCSLVDLD 677
+ P+ YVL+SN+YA+ G+W V ++R L+ +G+ K PGCS +++D
Sbjct: 511 IEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEID 560
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 150/554 (27%), Positives = 257/554 (46%), Gaps = 101/554 (18%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
F + YA SVF+++P P+ + +M R + L+ ++ Y M + F F +
Sbjct: 22 FDGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFL 81
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC---------------RD- 195
LK+C + + EG ++H ++K+G D +V T L+ MYA+ RD
Sbjct: 82 LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141
Query: 196 ---------------IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
I S++++FDE K+VVSW +MI+GY + ++ L LF M +
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V+ ++ T+ ++V+ACA+ ++ G+ +H +I G N +V AL+D+Y KCG + A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+ + L + D++SW +I GYT +AL LF + + PN VT+ S+L A A L
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321
Query: 361 GNLNMGRMVHSLGIRLGLEDYTVINA------LVDMYAKCHVIADARYIFETTS-EKDVI 413
G +++GR +H + I L+ V NA L+DMYAKC I A + ++++ + +
Sbjct: 322 GAIDIGRWIH-VYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLS 380
Query: 414 AWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
WN++I G + + PD +T V ++SAC+ G + +G
Sbjct: 381 TWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLG------- 433
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
R +F +MR+ +T + YG D G
Sbjct: 434 -----------------------------RNIFRSMRQDYNIT--PKLEHYGCMIDLLGH 462
Query: 517 LALF---SDMLNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
LF +M+N ++P+ VI+ ++L AC G + G + + P YV
Sbjct: 463 SGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPG--SYV 520
Query: 573 CMVDLLARAGRLEE 586
+ ++ A AG+ E
Sbjct: 521 LLSNIYATAGKWNE 534
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 195/408 (47%), Gaps = 33/408 (8%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L++ Y S G+++ A+ +FD +P D S+ MI Y YK +E +K M K +
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D + V+ AC + I+ G +VH I G G + ++ L+D+Y+KC ++ ++ ++
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
+ +K+V+SW ++I GY + +E L+LF M N +T+ S++ ACA L A+
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324
Query: 263 HQGKWLHGYILK----IGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTA 317
G+W+H YI K + + S L T+L+DMY KCG+I A V D + L +W A
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSL 372
MI G+ G + A +F+ + P+ +T +LSA + G L++GR M
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDY 444
Query: 373 GIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVT 432
I LE Y ++D+ + +A + T + PD V
Sbjct: 445 NITPKLEHY---GCMIDLLGHSGLFKEAEEMINTMP-----------------MEPDGVI 484
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
S++ AC G +++G S K + YV L N YA G
Sbjct: 485 WCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYV--LLSNIYATAG 530
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 10/218 (4%)
Query: 59 CKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C +GS+ + H+ + G +N K L+ +Y G V+ A + + + N D S+
Sbjct: 217 CAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISW 276
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
+I Y +LYK+ + ++ M + + ++ +L AC L ID G +H I K
Sbjct: 277 NTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 336
Query: 175 -----VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET-LDKNVVSWTSMIAGYVQNDCAQ 228
V S + T L+DMYAKC DI ++ QV D + ++++ +W +MI G+ + A
Sbjct: 337 KLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRAN 396
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+F+RMR+ +E + IT L++AC+ L G+
Sbjct: 397 AAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR 434
>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 754
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/556 (32%), Positives = 297/556 (53%), Gaps = 31/556 (5%)
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSR 200
+E + + +L+ C + R VH ++K G D+F V++ LV++YAKC ++ +R
Sbjct: 60 EEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDAR 119
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VF+ +NVV+WT+++ G+VQN + + +F M + TL +++ AC+ L+
Sbjct: 120 RVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQ 179
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+L G H YI+K ++ ++ + +AL +Y KCG + DA F + +++SWT+ +
Sbjct: 180 SLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVS 239
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
+G P K L+LF + D PN T+ S LS ++ +L +G V SL I+ G E
Sbjct: 240 ACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYES 299
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------LDDNVS----- 427
+ V N+L+ +Y K I +A F + ++ WN++I+G DN+S
Sbjct: 300 NLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRG 359
Query: 428 ----------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
PD TL SV+S C+ + A++ G +HA + K G LS +V V T+
Sbjct: 360 SEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLS-DVIVSTS 418
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ Y KCG + A F M + + W++MI G+ G +L +F DM V+PN
Sbjct: 419 LISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPN 478
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
V F +LSACSH GMV + F M + +K P M HY CMVD+ R GRLE+AL F+
Sbjct: 479 TVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFI 538
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
+ M EP ++ F+ GC + +LG +++L L P YVL+ N+Y S R+
Sbjct: 539 KKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFD 598
Query: 652 RVNQVRELMKQRGLSK 667
V++VR++M+ + K
Sbjct: 599 DVSRVRKMMEVEKVGK 614
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 212/458 (46%), Gaps = 31/458 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV++Y G+++ AR VF++MP + ++ ++ + N K + ++ M
Sbjct: 105 LVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPS 164
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ S VL AC L+ + G + H I+K D+ V + L +Y+KC + + + F
Sbjct: 165 IYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFS 224
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+KNV+SWTS ++ N +GL LF M ++ N+ TL S ++ C ++ +L
Sbjct: 225 RIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLEL 284
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G + +K G E N + +LL +Y+K G I +A F+ + + +V+W AMI G+ Q
Sbjct: 285 GTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQ 344
Query: 325 SGYPDK-----------ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
K ALK+F+ + P+ T++SVLS +++ + G +H+
Sbjct: 345 MMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQT 404
Query: 374 IRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------- 425
I+ G L D V +L+ MY KC I A F S + +IAW S+I+G +
Sbjct: 405 IKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQAL 464
Query: 426 ----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
V P+ VT V V+SAC+ G V + K+ + + +++
Sbjct: 465 HIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDM 524
Query: 476 YAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ + G + A M E + WS I G G+
Sbjct: 525 FVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGN 562
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 214/454 (47%), Gaps = 67/454 (14%)
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
+EG E ++ L+ C R+ + +HG+++K G N +++ L+++Y KCGN+
Sbjct: 56 KEGTEEEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNM 115
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
DAR VF+ + ++V+WT ++VG+ Q+ P A+ +F + +A +P+ T+++VL A
Sbjct: 116 EDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHAC 175
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ L +L +G H+ I+ L+ D +V +AL +Y+KC + DA F EK+VI+W
Sbjct: 176 SSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWT 235
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
S +S DN + P+ TL S +S C + ++++G+ + + K
Sbjct: 236 SAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKF 295
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD------- 512
G SN+ V +LL Y K G A F+ M + + VTW+AMI G+ +
Sbjct: 296 G-YESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLS 354
Query: 513 ----GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK--------------- 553
G +L +FS + ++P+ +++LS CS + +G +
Sbjct: 355 ACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVI 414
Query: 554 ------CFYSMCRDFKFVP---------SMKHYVCMVDLLARAGRLEEALEFMENMP--- 595
Y+ C + +M + M+ ++ G ++AL E+M
Sbjct: 415 VSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAG 474
Query: 596 IEPDVSLFGAFLHGC---GLYSR-FDLGEVMIKK 625
+ P+ F L C G+ S+ + E+M KK
Sbjct: 475 VRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKK 508
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 341/645 (52%), Gaps = 23/645 (3%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
LL + +G L +A HA L G ND LV++YG F + A+SVFD M +
Sbjct: 84 LLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRN 143
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
++ +I+ + + + + + M +E + S +L+AC L ++ G ++H
Sbjct: 144 TITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHG 203
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
++K G D FV T L+ MY++C D+G++ +V+ K+V MI+ Y + C ++
Sbjct: 204 FVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEK 263
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ +F + +E N T ++++AC + + LHG +K G + A++
Sbjct: 264 AIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVS 323
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+YVK G + +A F + +LVSWTA++ GY ++G KAL+ F+ +
Sbjct: 324 VYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCC 383
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTS 408
A++L ++ NL +G +H ++LG + D +V AL+D+YAKC + AR +F +
Sbjct: 384 FATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLL 443
Query: 409 EKDVIAWNSIISGL-----DD-----------NVSPDAVTLVSVISACASLGAVQVGSSL 452
+K+++++N+I+SG +D ++ PD+VT ++S A + G L
Sbjct: 444 DKNIVSFNAILSGYIGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCL 503
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
HAY K G +N VG A++ YAKCG A +F +M ++++W+A+I Y + G
Sbjct: 504 HAYIIKTGF-EANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQ 562
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
G +L LF +M EE P+E+ ++L ACS++G++ EG+ F M + P ++H+
Sbjct: 563 GRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFA 622
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
CMVDLL RAG L EA+ F+ P L+ +H C L+ + G++ K +L+L P+
Sbjct: 623 CMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPE 682
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+A Y+LVSNLYA G +VR +M +SK G S +++D
Sbjct: 683 EAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEID 727
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 205/651 (31%), Positives = 348/651 (53%), Gaps = 32/651 (4%)
Query: 66 KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFL 123
K+ HA LI G + ++ Y G A VF+SM D S+ ++I +
Sbjct: 67 KSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLD 126
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
N + ++ R E + V++AC L +G+ +H ++K G S V
Sbjct: 127 NGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSV 186
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGF 241
L+ MY D+ +R++FDE +K+V++W+ MI GY+Q + Q GL +F +M
Sbjct: 187 QNSLLSMYVDA-DMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPG 245
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+E + + + S++ ACA R + G+ +HG ++ G + + + +L+DMY KC + A
Sbjct: 246 IEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAF 305
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF+E+ + VSW +M+ G+ + +A L + + + VT+ ++L
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+ + +H + IR G E + V++AL+D YAKC++I A +F +DV++W+++IS
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G D V P+ +T+++++ AC+ ++ H + +QG +
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAHGVAIRQGF-A 484
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
S V VGTA+++ Y+KCG+ ++R FD + KN VTWSAMI YGM G +LALF++M
Sbjct: 485 SEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAHEALALFAEM 544
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
++PN V ++L+ACSH G+V EG F SM ++ P +HY CMVD+L RAG+
Sbjct: 545 KRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCMVDMLGRAGK 604
Query: 584 LEEALEFMENMP--IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
L+ A+E ++ MP ++ S++G+ L C Y +LG+ I ++LEL P + Y++ S
Sbjct: 605 LDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPSNSAGYLVAS 664
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSR 686
++YA+DG W ++R L K++G+ G SLV +D +A D S R
Sbjct: 665 SMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAGDGSHPR 715
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 175/355 (49%), Gaps = 28/355 (7%)
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+W I N QE + ++ +++ ++ +++ + + GK LH +
Sbjct: 14 NWILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRHGKSLHACL 73
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGYTQSGYPDKA 331
+K G + + + +++ Y++CG+ A VF+ + S D VSW +I G+ +G
Sbjct: 74 IKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAG 133
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDM 390
L FT+ + A F PN T+ V+ A LG + G ++H I+ G +V N+L+ M
Sbjct: 134 LWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSM 193
Query: 391 YAKCHVIAD---ARYIFETTSEKDVIAWNSIISG------------------LDDNVSPD 429
Y V AD AR +F+ EKDVIAW+ +I G L + PD
Sbjct: 194 Y----VDADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPD 249
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
V +VSV+ ACAS V G +H +G +++V +L++ Y+KC DA SA VF
Sbjct: 250 GVVMVSVLKACASSRDVCTGRLVHGLVIHRG-FDCDLFVENSLIDMYSKCKDAGSAFKVF 308
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
+ + ++N V+W++M+ G+ + + + +L S M E V+ +EV IL C +
Sbjct: 309 NEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKY 363
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 326/614 (53%), Gaps = 26/614 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T LV MY + R +FD M + S+ ++ Y N L +++ M+
Sbjct: 143 TSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVN 202
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQV 202
+ F F+ VL A + I+ G++VH IVK G +FV L+ MY K +G + V
Sbjct: 203 PNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD + ++ V+W MI GY EG +F+RMR V+ ++ + + C++ R L
Sbjct: 263 FDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL 322
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVG 321
+ K LH ++K G E + TAL+ Y KC ++ +A +F + ++V+WTAMI G
Sbjct: 323 NFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
+ Q+ +KA+ LF PNH T ++VL+ ++ +H+ I+ E
Sbjct: 383 FVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLHAQIIKAYYEKV 438
Query: 382 -TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------D 423
+V AL+D Y K + ++ +F + KD++AW+++++GL
Sbjct: 439 PSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVK 498
Query: 424 DNVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ V P+ T SVI+AC+S A V+ G +HA + K G S+ + V +ALL Y+K G+
Sbjct: 499 EGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGK-SNALCVSSALLTMYSKKGNI 557
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+SA VF E++ V+W++MI GYG GD +L +F M N+ + ++V F +L+AC
Sbjct: 558 ESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTAC 617
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H G+V EG K F M +D+ ++HY CMVDL +RAG ++A++ + MP ++
Sbjct: 618 THAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTI 677
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ L C ++ +LG++ +K++ L P+ A YVL+SN++A G W VR+LM +
Sbjct: 678 WRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDE 737
Query: 663 RGLSKSPGCSLVDL 676
R + K GCS +++
Sbjct: 738 RKVKKEAGCSWIEI 751
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 247/537 (45%), Gaps = 26/537 (4%)
Query: 97 KYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC 156
+YA +FD P D + ++ + N+ ++ + +K + D S LK C
Sbjct: 55 RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114
Query: 157 CELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWT 215
L D G +VHC+ +K G D V T LVDMY K D R +FDE KNVVSWT
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
S+++GY +N E + L N+M+ V N T +++ A A + G +H I+K
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G E + + AL+ MY+K + DA +VFD + D V+W MI GY G+ + ++F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
+ A + + L +Q LN + +H ++ G E + AL+ Y+KC
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKC 354
Query: 395 HVIADARYIFETT-SEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSV 436
+ +A +F + +V+ W ++I G N V P+ T +V
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTV 414
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
++ S + S LHA K V TALL+ Y K G+ + VF ++ K+
Sbjct: 415 LAGKPS----SLLSQLHAQIIK-AYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V WSAM+ G D ++ +F ++ E V+PNE F+++++ACS + E K +
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
+ ++ ++ + ++ G +E A + E D+ + + + G G +
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQH 585
>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
Length = 716
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 185/564 (32%), Positives = 308/564 (54%), Gaps = 19/564 (3%)
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDM 189
+E + M +R D F+ + ++ AC +L+ ++EG ++H ++ G D + T L+ M
Sbjct: 15 LELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQM 74
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
YAKC + +++VF+ K++ +W+S+IA Y + + +VL+ RM VE N +T
Sbjct: 75 YAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTF 134
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
+ CA + L G+ +H IL + + L +LL+MY+KC + +AR VF+ + +
Sbjct: 135 ACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKA 194
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
++ S+TAMI Y Q+G +AL+LF+ K PN T A++L A LGNL GR
Sbjct: 195 RNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRK 254
Query: 369 VHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD--- 424
VH G + V+ NALV MY KC +AR +F++ + ++VI+W S+I+
Sbjct: 255 VHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGN 314
Query: 425 -----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
+V P V+ S ++ACA LGA+ G +H + L S + T+LL
Sbjct: 315 PQEALNLFKRMDVEPSGVSFSSALNACALLGALDEGREIHHRVVEANLASPQME--TSLL 372
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ YA+CG AR VF+ M+ ++ + +AMI + G +L ++ M E + + +
Sbjct: 373 SMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGI 432
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F ++L ACSHT +V + S+ D VP ++HY+CMVD+L R+GRL +A E +E
Sbjct: 433 TFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVET 492
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
MP + D + L GC + D GE +K+ EL P + YV +SN+YA+ R+
Sbjct: 493 MPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDA 552
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+VR+ M++RG+++ S +++D
Sbjct: 553 RRVRKEMEERGVTRPVAVSYIEID 576
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/397 (29%), Positives = 204/397 (51%), Gaps = 25/397 (6%)
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
MIA V+ + L L+ M E + ++ + SLV AC KL+AL +G+ LH +++ G
Sbjct: 1 MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+ L TALL MY KCG++ DA+ VF+ + DL +W+++I Y ++G + A+ L+
Sbjct: 61 FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCH 395
PN VT A L A + L GR +H + + +D + ++L++MY KC
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD 180
Query: 396 VIADARYIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSVI 437
+ +AR +FE ++V ++ ++IS + + P+A T +++
Sbjct: 181 EMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATIL 240
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
A LG ++ G +H + +G +NV V AL+ Y KCG AR VFD+M +N
Sbjct: 241 GAVEGLGNLEKGRKVHRHLASRG-FDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNV 299
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
++W++MI Y G+ +L LF M +V+P+ V F++ L+AC+ G + EG + +
Sbjct: 300 ISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHR 356
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ P M+ ++ + AR G L++A M
Sbjct: 357 VVEANLASPQME--TSLLSMYARCGSLDDARRVFNRM 391
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 229/485 (47%), Gaps = 31/485 (6%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+L+ C +L + H LI+ G D T L+ MY G + A+ VF+ M
Sbjct: 35 SLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK 94
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
D +++ +I Y + V Y+ M E + F+ L C + + +G +H
Sbjct: 95 DLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIH 154
Query: 170 CEIVKVGGPDSFVLT-GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
I+ P VL L++MY KC ++ +R+VF+ +NV S+T+MI+ YVQ
Sbjct: 155 QRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHA 214
Query: 229 EGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E L LF+RM + +E N T +++ A L L +G+ +H ++ G + N + AL
Sbjct: 215 EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNAL 274
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MY KCG+ +AR VFD + + +++SWT+MI Y Q G P +AL LF K D P+
Sbjct: 275 VTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLF---KRMDVEPSG 331
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETT 407
V+ +S L+A A LG L+ GR +H + L + +L+ MYA+C + DAR +F
Sbjct: 332 VSFSSALNACALLGALDEGREIHHRVVEANLASPQMETSLLSMYARCGSLDDARRVFNRM 391
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV-QVG 449
+D + N++I+ + + D +T VSV+ AC+ V
Sbjct: 392 KTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCR 451
Query: 450 SSLHAYSTKQGL--LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
L + G+ L + +L + GDA+ +V + + V W ++ G
Sbjct: 452 DFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEE--LVETMPYQADAVAWMTLLSGC 509
Query: 508 GMQGD 512
GD
Sbjct: 510 KRHGD 514
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 132/283 (46%), Gaps = 9/283 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+LG + G+L + H L G TN LV+MYG G AR VFDSM
Sbjct: 238 TILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTAR 297
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ MI Y + ++ + +K M E FS L AC L +DEG ++H
Sbjct: 298 NVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIH 354
Query: 170 CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+V+ + T L+ MYA+C + +R+VF+ ++ S +MIA + Q+ ++
Sbjct: 355 HRVVEANLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQ 414
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTALL 288
L ++ +M + + + IT S++ AC+ + + +L ++ G+ ++
Sbjct: 415 ALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMV 474
Query: 289 DMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDK 330
D+ + G + DA + + + D V+W ++ G + G D+
Sbjct: 475 DVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDR 517
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 287/510 (56%), Gaps = 23/510 (4%)
Query: 195 DIGS---SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
D GS S+ VF + + N+ W +MI G V DC + + L+ MR G N T+
Sbjct: 60 DFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPF 119
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
++ ACA+ + G +H ++K G + + + T+LL +YVKC N DA VFD++ +
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+VSWTA+I GY SG+ +A+ F P+ ++ VL+A A+LG+ G +
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239
Query: 372 LGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------- 421
G+ + V +L+DMY KC + A IF EKD+++W+++I G
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 422 -LD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
LD +N+ PD T+V V+SACA+LGA+ +G + + LS+ V +GTAL+
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPV-LGTALI 358
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y+KCG A +F AM++K+ V W+AM+ G M G +LFS + ++P+E
Sbjct: 359 DMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +L C+H G V EG + F +M R F PS++HY CMVDLL RAG L EA + + N
Sbjct: 419 TFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINN 478
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
MP++P+ ++GA L GC L+ L E ++KK++EL P + YV +SN+Y+ + RW
Sbjct: 479 MPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEA 538
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD-IANDF 682
++R MK++ + K CS +++D I ++F
Sbjct: 539 EKIRSTMKEQQIQKIRACSWIEIDGIVHEF 568
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 230/469 (49%), Gaps = 21/469 (4%)
Query: 65 LKAFHALLIVDGLTNDKCNTKLVSMYG-SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
LK HA L+ L D L+ FG Y++ VF + P+ + + MIR
Sbjct: 32 LKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVS 91
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
D + D + Y MR +NF VLKAC D+ G+K+H +VK G D FV
Sbjct: 92 KDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFV 151
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+ +Y KC + + +VFD+ DKNVVSWT++I GY+ + +E + F ++ E +
Sbjct: 152 KTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGL 211
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + +L ++ ACA+L G+W+ YI G+ N + T+LLDMYVKCGN+ A
Sbjct: 212 KPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANL 271
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F + D+VSW+ MI GY +G P +AL LF + + P+ T+ VLSA A LG
Sbjct: 272 IFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGA 331
Query: 363 LNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L++G SL R V+ AL+DMY+KC + A IF +KD + WN+++ G
Sbjct: 332 LDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVG 391
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
L N + PD T + ++ C G V G + L+
Sbjct: 392 LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTP 451
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGD 512
++ +++ + G A + + M K N V W A++GG + D
Sbjct: 452 SIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKD 500
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 197/387 (50%), Gaps = 28/387 (7%)
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L +Q K +H +L++ ++ +++L+ +L + G+ ++ VF ++ ++ W M
Sbjct: 26 LNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I G D A+ L+ + F PN+ TI VL A A+ ++ +G +HSL ++ G
Sbjct: 86 IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
+ D V +L+ +Y KC DA +F+ +K+V++W +II+G
Sbjct: 146 DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKK 205
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L+ + PD+ +LV V++ACA LG G + Y + G + NV+V T+LL+ Y KCG
Sbjct: 206 LLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSG-MGRNVFVATSLLDMYVKCG 264
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + A ++F AM EK+ V+WS MI GY G +L LF M +E ++P+ +LS
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
AC+ G + G M R+ +F+ + ++D+ ++ G + +A E M + D
Sbjct: 325 ACATLGALDLGIWASSLMDRN-EFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-KKDR 382
Query: 601 SLFGAFL-------HGCGLYSRFDLGE 620
++ A + H ++S F L E
Sbjct: 383 VVWNAMMVGLSMNGHAKAVFSLFSLVE 409
>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
Length = 1866
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 181/517 (35%), Positives = 278/517 (53%), Gaps = 22/517 (4%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLD--KNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
F+ L+++YAKC + + +F D KNVVSWTS+I + + L FN MR
Sbjct: 63 FLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMR 122
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
V N T ++++AC A G+ +H + K G +V+AL+DMY KC ++
Sbjct: 123 RSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDML 182
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP-NHVTIASVLSAS 357
A VF+E+ +LVSW MIVG+ Q+ D+A+ F + + V+ +SV SA
Sbjct: 183 MAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSAC 242
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A GNL G+ VH + ++LG+ + IN +L DMY KC + D +F T +DV+ WN
Sbjct: 243 ANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWN 302
Query: 417 SIISGLDDNVS-----------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+I N + PD + SV+ +CA+L A+ G+ +H +
Sbjct: 303 IMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRS 362
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G + N+ V ++L+ YAKCG A +F+ ++N V W+A+I G + L
Sbjct: 363 GFVK-NLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 421
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F ML E ++P+ + F ++LSACSHTG V EG+ F SM + P +HY C+VDLL+
Sbjct: 422 FEQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLS 481
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
RAG L+ A F+E MPI+PD S++GA L C +S +G+ + K+ +L PD YVL
Sbjct: 482 RAGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVL 541
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ N+ +G ++VR M+ G+ K PGCS +D+
Sbjct: 542 LCNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDI 578
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 157/602 (26%), Positives = 267/602 (44%), Gaps = 81/602 (13%)
Query: 21 LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTN- 79
L FF QTP H L S +SL L +++ H+ LI L +
Sbjct: 14 LSFFKSHYHQTPFLHPL----TSLNSL--------LNCSRTSKHATQIHSQLITTALLSL 61
Query: 80 DKCNTKLVSMYGSFGHVKYARSVFDSMPN--PDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
L+++Y G V +F S P+ + S+ +I + F+ M
Sbjct: 62 PFLFNNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHM 121
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDI 196
R+ +++ FS VL AC + G ++H + K G + FV++ LVDMYAKC D+
Sbjct: 122 RRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDM 181
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR-MREGFVEGNQITLGSLVTA 255
+ +VF+E +N+VSW +MI G++QN + + F + E ++++ S+ +A
Sbjct: 182 LMAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSA 241
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA L GK +HG LK+G+ ++ +L DMY KCG D +F + D+V+W
Sbjct: 242 CANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTW 301
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI+ Y + + A F + P+ + +SVL + A L L G ++H+ IR
Sbjct: 302 NIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIR 361
Query: 376 LG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
G +++ V ++L+ MYAKC + DA IFE T +++V+ W +II+
Sbjct: 362 SGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVEL 421
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG----TALL 473
L + + PD +T VSV+SAC+ G V+ G + + +Y G ++
Sbjct: 422 FEQMLREGIKPDYITFVSVLSACSHTGRVEEG----FFYFNSMIKVHGIYPGHEHYACIV 477
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ ++ G+ A+ + M ++P+
Sbjct: 478 DLLSRAGELDRAKRFIELM----------------------------------PIKPDAS 503
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK-HYVCMVDLLARAGRLEEALEFME 592
++ +LSAC + + G + + F P +YV + ++L R G L EA E
Sbjct: 504 VWGALLSACRNHSNLIMGKEVALKL---FDLEPDNPGNYVLLCNILTRNGMLNEADEVRR 560
Query: 593 NM 594
M
Sbjct: 561 KM 562
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 167/344 (48%), Gaps = 18/344 (5%)
Query: 46 SLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARS 101
+L + ++ C + G+L K H + + G+ N N L MYG G
Sbjct: 229 ALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAK 288
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+F + D ++ +MI Y N Y+D + MR++ D +S VL +C L
Sbjct: 289 LFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAA 348
Query: 162 IDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+ +G +H +I++ G + V + L+ MYAKC + + Q+F+ET D+NVV WT++IA
Sbjct: 349 LYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAA 408
Query: 221 YVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI-GIE 278
Q+ A + LF +M REG ++ + IT S+++AC+ + +G + ++K+ GI
Sbjct: 409 CQQHGHANWVVELFEQMLREG-IKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIY 467
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSI--DLVSWTAMIVGYTQSGY----PDKAL 332
++D+ + G + A+ F EL I D W A++ + AL
Sbjct: 468 PGHEHYACIVDLLSRAGELDRAKR-FIELMPIKPDASVWGALLSACRNHSNLIMGKEVAL 526
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLN-MGRMVHSLGIR 375
KLF + D N+V + ++L+ + L + + R + S+G+R
Sbjct: 527 KLFDLE--PDNPGNYVLLCNILTRNGMLNEADEVRRKMESIGVR 568
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 190/543 (34%), Positives = 290/543 (53%), Gaps = 20/543 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L+ Y G + AR +FD MP+ D + VM+ Y N + + + MR+
Sbjct: 186 SSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETN 245
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
++ F+ VL C I+ G ++H +V G DS V L+ MYAKC + +R++
Sbjct: 246 PNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRL 305
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD ++V+W MI+GYVQN E LF+ M ++ + IT S + ++ L
Sbjct: 306 FDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATL 365
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
QGK +H YI++ G+ ++ L +AL+D+Y KC ++ A +FD+ +D+V TAMI GY
Sbjct: 366 RQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGY 425
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
+G + AL++F N VT+ASVL A A L L +G+ +H ++ G
Sbjct: 426 VLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSC 485
Query: 383 VI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP------------- 428
+ +A++DMYAKC + A F S KD + WNS+I+ N P
Sbjct: 486 YVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMA 545
Query: 429 ----DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
D V++ + +SACA+L A+ G +HA+ + G S+++ +AL++ Y+KCG+
Sbjct: 546 GTKYDCVSISAALSACANLPALHYGKEIHAFMMR-GAFRSDLFAESALIDMYSKCGNLDL 604
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A VFD M EKN V+W+++I YG G SL LF ML + +QP+ V F I+SAC H
Sbjct: 605 ACRVFDMMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGH 664
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G V EG F M + + M+HY CMVDL RAGRL EA + +MP PD ++G
Sbjct: 665 AGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWG 724
Query: 605 AFL 607
+L
Sbjct: 725 LYL 727
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 172/595 (28%), Positives = 286/595 (48%), Gaps = 25/595 (4%)
Query: 69 HALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA ++V+G+ N TKL+ MY G A+++F + + MIR + + +
Sbjct: 69 HAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQF 128
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGL 186
+ FY M D + F V+KAC L + G VH +I +G D FV + L
Sbjct: 129 DFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSL 188
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ Y++ I +R +FD K+ V W M+ GYV+N +F MR N
Sbjct: 189 IKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNS 248
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+T +++ CA ++ G LHG ++ G+E++S + LL MY KCG++ DAR +FD
Sbjct: 249 VTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDM 308
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ DLV+W MI GY Q+G+ D+A LF + A P+ +T +S L ++ L G
Sbjct: 309 MPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQG 368
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+ +H IR G+ D + +AL+D+Y KC + A IF+ + D++ ++ISG
Sbjct: 369 KEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLN 428
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
L + + ++VTL SV+ ACA L A+ +G LH + K G + YV
Sbjct: 429 GMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNG-HGGSCYV 487
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
G+A+++ YAKCG A F + K+ V W++MI G ++ LF M
Sbjct: 488 GSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 547
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+ + V + LSAC++ + G + M R F + ++D+ ++ G L+ A
Sbjct: 548 KYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNLDLAC 606
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVS 641
+ M + +VS + + + G + R + ML + PD + ++S
Sbjct: 607 RVFDMMEEKNEVS-WNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIIS 660
Score = 222 bits (565), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 229/446 (51%), Gaps = 22/446 (4%)
Query: 68 FHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
H L++ GL D NT L++MY GH+ AR +FD MP D ++ MI Y N
Sbjct: 270 LHGLVVSSGLEMDSPVANT-LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNG 328
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
+ + M + D+ FS L E + +G ++HC I++ G D F+ +
Sbjct: 329 FMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKS 388
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+D+Y KCRD+ + ++FD+ ++V T+MI+GYV N L +F + + +
Sbjct: 389 ALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRA 448
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N +TL S++ ACA L AL GK LHG+ILK G + ++ +A++DMY KCG + A F
Sbjct: 449 NSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTF 508
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ D V W +MI +Q+G P++A+ LF A + V+I++ LSA A L L+
Sbjct: 509 IGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALH 568
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-- 421
G+ +H+ +R D +AL+DMY+KC + A +F+ EK+ ++WNSII+
Sbjct: 569 YGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYG 628
Query: 422 ---------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
L D + PD VT +++ISAC G V G T++ + + +
Sbjct: 629 NHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARM 688
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAM 492
+++ + + G A + ++M
Sbjct: 689 EHYACMVDLFGRAGRLNEAFGMINSM 714
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 152/321 (47%), Gaps = 19/321 (5%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L S++ C L G+ H +L GI N L T LL MYV CG DA+++F +L
Sbjct: 49 LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
W MI G+T G D AL + P+ T V+ A L ++ +GR+
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 369 VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-- 425
VH +G E D V ++L+ Y++ I DARY+F+ KD + WN +++G N
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
+P++VT V+S CAS + GS LH G L + V
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG-LEMDSPVAN 287
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
LL YAKCG AR +FD M + + VTW+ MI GY G + LF +M++ ++P
Sbjct: 288 TLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKP 347
Query: 531 NEVIFTTILSACSHTGMVGEG 551
+ + F++ L S + +G
Sbjct: 348 DSITFSSFLPLLSEGATLRQG 368
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
DD+++P LVS++ C + G HA G + N +GT LL Y CG
Sbjct: 42 DDSLAPQ---LVSILQTCTDPSGLSHGRQAHAQMLVNG-IGYNGILGTKLLGMYVLCGAF 97
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A+ +F +R + W+ MI G+ M G +L + ML P++ F ++ AC
Sbjct: 98 LDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKAC 157
Query: 543 SHTGMVGEG 551
V G
Sbjct: 158 GGLNSVALG 166
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 195/640 (30%), Positives = 333/640 (52%), Gaps = 49/640 (7%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L+ MY + + +VF +MP ++ S+ +I N+ ++ +K M+K
Sbjct: 220 SALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVG 279
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
+++ VLK+C L D+ G ++H +K D V T +DMYAKC ++ ++++
Sbjct: 280 VSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRL 339
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD + + N+ S+ +MI GY Q D L+LF ++ + + ++I+L + ACA ++ L
Sbjct: 340 FDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGL 399
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+G LHG K N + A +DMY KC + +A VFDE+ D VSW A+I +
Sbjct: 400 SEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAH 459
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
Q+ K L + + P+ T SVL A A +LN G +H+ ++LG+
Sbjct: 460 EQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNP 518
Query: 383 VI-NALVDMYAKCHVIADARYIF-----------------ETTSEKD----------VIA 414
I ++LVDMY+KC +I +A I ET E +++
Sbjct: 519 YIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVS 578
Query: 415 WNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
WN+IISG ++ ++PD T +V+ CA+L ++ +G +HA+
Sbjct: 579 WNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVI 638
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K+ L +VY+ + L++ Y+KCG+ +R++F+ ++ VTW+AMI GY G G ++
Sbjct: 639 KKEL-QYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAI 697
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
LF M+ + PN F ++L AC+H G+V G F+ M +++ P ++HY MVD+
Sbjct: 698 KLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDI 757
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL-YSRFDLGEVMIKKMLELHPDKACY 636
L ++G +E+ALE ++ MP E D ++ L C + + + EV +L L P +
Sbjct: 758 LGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSST 817
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+L+SN+YA G W + +++R M+ L K PGCS V++
Sbjct: 818 YILLSNIYADAGMWDKASELRTAMRSDKLKKEPGCSWVEI 857
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 196/732 (26%), Positives = 341/732 (46%), Gaps = 117/732 (15%)
Query: 2 KLISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKS 61
+++ L +H+++ P ++R FS + T + H P+ N + K
Sbjct: 12 RVVLLFHQHLTKNI-PYRRVRIFSIS------------TASVNHEKPATSVANFSFVFKE 58
Query: 62 TGSLKAF------HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
+A HA +I+ G + L+ +Y + G++ YA +FD MP D S+
Sbjct: 59 CAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSW 118
Query: 115 QVMIRWYFL-NDLYK-----------DIVEFYKCMRKRLK-------------------E 143
MI Y ND+ + D+V + + L+ E
Sbjct: 119 NAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVE 178
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQ 201
DN FS +LK C L + G ++H +++G D+ V++G L+DMYAKC+ + S
Sbjct: 179 FDNKSFSVILKVCSILENYKLGTQIHGIALRMG-YDTDVVSGSALLDMYAKCKRLDESFT 237
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF KN +SW+++IAG VQN+ GL +F M++ V +Q S++ +CA L
Sbjct: 238 VFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPD 297
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G LH + LK + + TA LDMY KC N++DA+ +FD +++L S+ AMI G
Sbjct: 298 LRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITG 357
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-ED 380
Y+Q +AL LF + + ++++ L A A + L+ G +H L + +
Sbjct: 358 YSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRN 417
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V NA +DMY KC + +A +F+ KD ++WN+II+ + N
Sbjct: 418 ICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLR 477
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ PD T SV+ ACA ++ G +H K G ++SN Y+G++L++ Y+KCG
Sbjct: 478 SGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLG-MASNPYIGSSLVDMYSKCGMID 535
Query: 484 SAR----MVFDAMREKNT-----------------------VTWSAMIGGYGMQGDGGGS 516
A +F + + NT V+W+A+I GY M+ +
Sbjct: 536 EAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDA 595
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVC-- 573
F+ M+ + P++ ++T+L C++ +G G + + + ++ ++ Y+C
Sbjct: 596 QRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQY----DVYICST 651
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK-----KMLE 628
+VD+ ++ G L ++ E PI D + A + CG Y+ +GE IK ++
Sbjct: 652 LVDMYSKCGNLHDSRLMFEKAPIR-DFVTWNAMI--CG-YAHHGMGEEAIKLFESMVLMN 707
Query: 629 LHPDKACYYVLV 640
+ P+ A + L+
Sbjct: 708 IMPNHATFVSLL 719
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 184/393 (46%), Gaps = 39/393 (9%)
Query: 68 FHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H L + + C + MYG + A VFD M D S+ +I + N+
Sbjct: 405 LHGLATKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEE 464
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+ M + E D + F VLKAC ++ GM++H IVK+G + ++ +
Sbjct: 465 RSKTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSS 523
Query: 186 LVDMYAKCRDIGSSRQVF---------------------------DETLDKNVVSWTSMI 218
LVDMY+KC I + ++ D + + +VSW ++I
Sbjct: 524 LVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAII 583
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
+GYV +++ FNRM E + ++ T +++ CA L ++ GK +H +++K ++
Sbjct: 584 SGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQ 643
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ ++ + L+DMY KCGN+ D+R +F++ D V+W AMI GY G ++A+KLF
Sbjct: 644 YDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESM 703
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAK 393
+ PNH T S+L A A +G + G M G+ LE Y+ +VD+ K
Sbjct: 704 VLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYS---NMVDILGK 760
Query: 394 CHVIADA-RYIFETTSEKDVIAWNSIISGLDDN 425
+ A I E E D + W +++S N
Sbjct: 761 SGEVEKALELIQEMPFEADDVIWRTLLSACKIN 793
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 284/488 (58%), Gaps = 31/488 (6%)
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
+ ++++GY D + +++ R+ ++GF+ + T +++ +CAK + +G+ +HG
Sbjct: 1 PFNALVSGYAIGDRPKTAFLVYRRIVKDGFLP-DMFTFPAVLKSCAKFVGIGEGRQVHGV 59
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
I+K+G N ++ +L+ Y C DA VFDE+ D+VSWT +I GY ++G D+A
Sbjct: 60 IIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEA 119
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR----LGLEDYTVINAL 387
+ LF D PN T SVL A + G L++G+ +H L + +GLE V NAL
Sbjct: 120 VGLFLR---MDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLE---VSNAL 173
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDA 430
+DMY KC + A+ +F+ +EKD+++W SIISGL + PD
Sbjct: 174 MDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDG 233
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
+ L SV+SACA LGA+ G +H + ++ + ++ +GTA+++ YAKCG + + +F+
Sbjct: 234 IILTSVLSACARLGALDYGRWVHEHIDRKAI-KWDIQIGTAMVDMYAKCGCIEMSMQIFN 292
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
M KN +TW+A++ G M G L LF +M+ ++PNEV F IL+AC H G+V E
Sbjct: 293 GMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNE 352
Query: 551 GWKCFYSM-CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
G + F M + + P ++HY CMVDLL RA L+EALE + MP+ PDV + GA L
Sbjct: 353 GRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSA 412
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C +L + ++ + +EL + YVL+SN++A + RW V ++R LMK++G+ K P
Sbjct: 413 CKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPP 472
Query: 670 GCSLVDLD 677
G ++++LD
Sbjct: 473 GSTVIELD 480
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 193/366 (52%), Gaps = 22/366 (6%)
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
F ++ Y + D K Y+ + K D F F VLK+C + I EG +VH I
Sbjct: 1 PFNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVI 60
Query: 173 VKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+K+G + +V LV Y+ C+ G + +VFDE L ++VVSWT +I+GYV+ E +
Sbjct: 61 IKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAV 120
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
LF RM VE N T S++ AC + L GK +HG K + + AL+DMY
Sbjct: 121 GLFLRMD---VEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMY 177
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
VKCG + A+ VFDEL D+VSWT++I G Q P +AL+LF D + + P+ + +
Sbjct: 178 VKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILT 237
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
SVLSA A+LG L+ GR VH R ++ D + A+VDMYAKC I + IF K
Sbjct: 238 SVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHK 297
Query: 411 DVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLH 453
+V+ WN++++GL + + P+ VT +++++AC G V G
Sbjct: 298 NVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYF 357
Query: 454 AYSTKQ 459
+ Q
Sbjct: 358 NWMKGQ 363
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 122/441 (27%), Positives = 200/441 (45%), Gaps = 37/441 (8%)
Query: 38 DQTFASFHSLPSI--PCLNLLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFG 94
D + P++ C +G+ G + H ++I G N LV Y
Sbjct: 28 DGFLPDMFTFPAVLKSCAKFVGI----GEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCK 83
Query: 95 HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLK 154
A VFD M D S+ +I Y L+ + V + M E + F VL
Sbjct: 84 RFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMDV---EPNAATFVSVLV 140
Query: 155 ACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS 213
AC + G +H K G V L+DMY KC + ++QVFDE +K++VS
Sbjct: 141 ACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVS 200
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
WTS+I+G VQ +C +E L LF M+ +E + I L S+++ACA+L AL G+W+H +I
Sbjct: 201 WTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHID 260
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
+ I+ + + TA++DMY KCG I + +F+ + ++++W A++ G G+ K L+
Sbjct: 261 RKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLE 320
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV------HSLGIRLGLEDYTVINAL 387
LF + PN VT ++L+A G +N GR + LE Y +
Sbjct: 321 LFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHY---GCM 377
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQ 447
VD+ + ++ +A + + +SPD + +++SAC G +
Sbjct: 378 VDLLCRARLLDEALELTKAMP-----------------MSPDVRIMGALLSACKENGNTE 420
Query: 448 VGSSLHAYSTKQGLLSSNVYV 468
+ + + S VYV
Sbjct: 421 LPQEILDRFVELDSHDSGVYV 441
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 310/548 (56%), Gaps = 25/548 (4%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGP--DSFVL-TGLVDMYAKCRDIGSSRQVFDETLD 208
+L+AC + +DI+ G ++H E+V + FVL T ++ MY+ C SR VFD+
Sbjct: 111 LLQACGQRKDIEVGRRLH-EMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 169
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV-EGNQITLGSLVTACAKLRALHQGKW 267
KN+ W ++++ Y +N+ ++ + +F+ + + + TL ++ ACA L L G+
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 229
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDA-RSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG K+ + + + AL+ MY KCG + +A + VFD + + + SW A++ GY Q+
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS 289
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
P KAL L+ + P+ TI S+L A +++ +L+ G +H +R GL D +
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSP 428
+L+ +Y C A+ +F+ + +++WN +I+G L D + P
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
+ ++ V AC+ L A+++G LH ++ K L+ +++V +++++ YAK G ++ +
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALK-AHLTEDIFVSSSIIDMYAKGGCIGLSQRI 468
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
FD +REK+ +W+ +I GYG+ G G +L LF ML ++P++ FT IL ACSH G+V
Sbjct: 469 FDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLV 528
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
+G + F M P ++HY C+VD+L RAGR+++AL +E MP +PD ++ + L
Sbjct: 529 EDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 588
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C ++ LGE + K+LEL P+K YVL+SNL+A G+W V +VR MK GL K
Sbjct: 589 SCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKD 648
Query: 669 PGCSLVDL 676
GCS +++
Sbjct: 649 AGCSWIEV 656
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 138/485 (28%), Positives = 245/485 (50%), Gaps = 25/485 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
NT++++MY G +R VFD + + + + ++ Y N+L++D + + + +
Sbjct: 144 NTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELIS-VT 202
Query: 143 EH--DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
EH DNF V+KAC L D+ G +H K+ D FV L+ MY KC + +
Sbjct: 203 EHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEA 262
Query: 200 -RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
++VFD K V SW +++ GY QN ++ L L+ +M + ++ + T+GSL+ AC++
Sbjct: 263 VKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 322
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+++LH G+ +HG+ L+ G+ ++ + +LL +Y+ CG A+ +FD + LVSW M
Sbjct: 323 MKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVM 382
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I GY+Q+G PD+A+ LF P + I V A +QL L +G+ +H ++ L
Sbjct: 383 IAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHL 442
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
ED V ++++DMYAK I ++ IF+ EKDV +WN II+G
Sbjct: 443 TEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEK 502
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L + PD T ++ AC+ G V+ G + + T +++ + G
Sbjct: 503 MLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAG 562
Query: 481 DAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN-EEVQPNEVIFTTI 538
A R++ + + ++ WS+++ + G+ G + + +L E +P + +
Sbjct: 563 RIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISN 622
Query: 539 LSACS 543
L A S
Sbjct: 623 LFAGS 627
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 85/177 (48%), Gaps = 7/177 (3%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDS 105
I + + G C +L K H + LT D ++ ++ MY G + ++ +FD
Sbjct: 412 IAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDR 471
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ D S+ V+I Y ++ K+ +E ++ M + + D+F F+ +L AC +++G
Sbjct: 472 LREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDG 531
Query: 166 MKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETL-DKNVVSWTSMIA 219
++ +++ + P T +VDM + I + ++ +E D + W+S+++
Sbjct: 532 LEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 588
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 286/510 (56%), Gaps = 23/510 (4%)
Query: 195 DIGS---SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
D GS S+ VF + + N+ W +MI G V DC + + L+ MR G N T+
Sbjct: 60 DFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPF 119
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
++ ACA+ + G +H ++K G + + + T+LL +YVKC N DA VFD++ +
Sbjct: 120 VLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKN 179
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+VSWTA+I GY SG+ +A+ F P+ ++ VL+A A+LG+ G +
Sbjct: 180 VVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239
Query: 372 LGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------- 421
G+ + V +L+DMY KC + A IF EKD+++W+++I G
Sbjct: 240 YISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 422 -LD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
LD +N+ PD T+V V+SACA+LGA+ +G + + LS+ V +GTAL+
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPV-LGTALI 358
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y+KCG A +F AM+ K+ V W+AM+ G M G +LFS + ++P+E
Sbjct: 359 DMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDEN 418
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +L C+H G V EG + F +M R F PS++HY CMVDLL RAG L EA + + N
Sbjct: 419 TFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINN 478
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
MP++P+ ++GA L GC L+ L E ++KK++EL P + YV +SN+Y+ + RW
Sbjct: 479 MPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEA 538
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD-IANDF 682
++R MK++ + K CS +++D I ++F
Sbjct: 539 EKIRSTMKEQQIQKIRACSWIEIDGIVHEF 568
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/469 (31%), Positives = 229/469 (48%), Gaps = 21/469 (4%)
Query: 65 LKAFHALLIVDGLTNDKCNTKLVSMYG-SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
LK HA L+ L D L+ FG Y++ VF + P+ + + MIR
Sbjct: 32 LKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVS 91
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
D + D + Y MR +NF VLKAC D+ G+K+H +VK G D FV
Sbjct: 92 KDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFV 151
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+ +Y KC + + +VFD+ DKNVVSWT++I GY+ + +E + F ++ E +
Sbjct: 152 KTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGL 211
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + +L ++ ACA+L G+W+ YI G+ N + T+LLDMYVKCGN+ A
Sbjct: 212 KPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANL 271
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F + D+VSW+ MI GY +G P +AL LF + + P+ T+ VLSA A LG
Sbjct: 272 IFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGA 331
Query: 363 LNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L++G SL R V+ AL+DMY+KC + A IF KD + WN+++ G
Sbjct: 332 LDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVG 391
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
L N + PD T + ++ C G V G + L+
Sbjct: 392 LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTP 451
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGD 512
++ +++ + G A + + M K N V W A++GG + D
Sbjct: 452 SIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKD 500
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 196/387 (50%), Gaps = 28/387 (7%)
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L +Q K +H +L++ ++ +++L+ +L + G+ ++ VF ++ ++ W M
Sbjct: 26 LNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTM 85
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I G D A+ L+ + F PN+ TI VL A A+ ++ +G +HSL ++ G
Sbjct: 86 IRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY 145
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
+ D V +L+ +Y KC DA +F+ +K+V++W +II+G
Sbjct: 146 DHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKK 205
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L+ + PD+ +LV V++ACA LG G + Y + G + NV+V T+LL+ Y KCG
Sbjct: 206 LLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSG-MGRNVFVATSLLDMYVKCG 264
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + A ++F AM EK+ V+WS MI GY G +L LF M +E ++P+ +LS
Sbjct: 265 NLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLS 324
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
AC+ G + G M R+ +F+ + ++D+ ++ G + +A E M D
Sbjct: 325 ACATLGALDLGIWASSLMDRN-EFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK-RKDR 382
Query: 601 SLFGAFL-------HGCGLYSRFDLGE 620
++ A + H ++S F L E
Sbjct: 383 VVWNAMMVGLSMNGHAKAVFSLFSLVE 409
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 332/643 (51%), Gaps = 30/643 (4%)
Query: 61 STGSLKAF------HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
+ ++KAF HA ++ GL N + L+++Y G A++VFD +
Sbjct: 334 AAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVM 393
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ M+ + N+L ++ + ++ M + + D F F +L AC L G +VHC +
Sbjct: 394 WNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTI 453
Query: 174 KVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
K S FV +DMY+K IG ++ +F K+ +SW ++ G QN +E +
Sbjct: 454 KNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 513
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
+ RMR + + ++ + + AC+ +RA GK +H +K GI N + ++L+D+Y
Sbjct: 514 MLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYS 573
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K G++ +R +F ++ + +V A+I G+ Q+ D+A++LF P+ VT +S
Sbjct: 574 KHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSS 633
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVIN-ALVDMYAKCHVIADA-RYIFETTSE 409
+LS + N +G+ VH ++ G L D T++ +L +Y K ++ DA + + E
Sbjct: 634 ILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDH 693
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
K++ W +IISG N V D T SV+ AC+ + A G +
Sbjct: 694 KNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEI 753
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQG 511
H TK G S +AL++ Y+KCGD S+ F ++ K + W++MI G+ G
Sbjct: 754 HGLITKSGFGSYETAT-SALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNG 812
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+L LF M +++P+EV F +L AC+H+G++ EG F M + + P + HY
Sbjct: 813 YADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHY 872
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C +DLL R G L+EA E ++ +P PD ++ +L C ++ + G++ +K++EL P
Sbjct: 873 ACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEP 932
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+ YVL+S+L+A+ G W RE M+++G++K PGCS +
Sbjct: 933 QYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWI 975
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 272/579 (46%), Gaps = 61/579 (10%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C G L + H ++ G ++ C LV MY G V AR VFD + PD
Sbjct: 164 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 223
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ MI Y Y++ + + M K
Sbjct: 224 TICWSSMIACYHRVGCYQEALALFSRMDKM------------------------------ 253
Query: 171 EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
PD L ++ A + + + + + V+W ++I+G+ Q+
Sbjct: 254 ----GSAPDQVTLVTIISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNV 309
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L L+ MR + + T S+++A A ++A +G+ +H + G++ N + ++L+++
Sbjct: 310 LGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINL 369
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KCG DA++VFD C ++V W AM+ G+ Q+ P++A+++F + T
Sbjct: 370 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 429
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE 409
S+L A L + +G+ VH + I+ ++ V NA +DMY+K I DA+ +F
Sbjct: 430 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 489
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
KD I+WN++ GL N ++PD V+ + I+AC+++ A + G +
Sbjct: 490 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 549
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H + K G+ SN VG++L++ Y+K GD +S+R +F + + V +A+I G+ +
Sbjct: 550 HCLAIKYGIC-SNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNN 608
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHT--GMVGEGWKCFYSMCRDFKFVPSMKH 570
++ LF +L + ++P+ V F++ILS CS + +G+ C Y++ + ++
Sbjct: 609 EDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQVHC-YTLKSGVLYDDTLLG 667
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
V + + ++ LE+A + + MP ++ + A + G
Sbjct: 668 -VSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISG 705
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 140/548 (25%), Positives = 255/548 (46%), Gaps = 64/548 (11%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR-KRLKEH 144
LV +Y G V YA S + ++ + + D++ ++ +R
Sbjct: 97 LVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGRP 156
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVF 203
D F + VL AC + + G +VHC++VK G S F LVDMYAKC D+ ++R+VF
Sbjct: 157 DQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVF 216
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D + + W+SMIA Y + C QE L LF+RM + +Q+TL ++++ A
Sbjct: 217 DGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLA------ 270
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G + A ++ ++ + V+W A+I G+
Sbjct: 271 -----------------------------SSGRLDHATALLKKMPTPSTVAWNAVISGHA 301
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
QSG L L+ D + +P T AS+LSA+A + G+ +H+ + GL+ +
Sbjct: 302 QSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVF 361
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP-------------- 428
V ++L+++YAKC +DA+ +F+ + EK+++ WN++++G N P
Sbjct: 362 VGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYT 421
Query: 429 ---DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
D T VS++ AC L + +G +H + K + +++V A L+ Y+K G A
Sbjct: 422 LQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKN-CMDISLFVANATLDMYSKYGAIGDA 480
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ +F + K++++W+A+ G + ++ + M + P++V F+T ++ACS+
Sbjct: 481 KALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNI 540
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENM---PIEPDV 600
G + C K+ H V ++DL ++ G +E + + + I P
Sbjct: 541 RATETGKQIH---CLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPIN 597
Query: 601 SLFGAFLH 608
+L F+
Sbjct: 598 ALIAGFVQ 605
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 135/525 (25%), Positives = 250/525 (47%), Gaps = 47/525 (8%)
Query: 168 VHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I++ G P L LV++Y K +G + ++ + +S+++ + ++
Sbjct: 78 LHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHARSGS 137
Query: 227 AQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ L F +R +Q L +++AC+++ L G+ +H ++K G +
Sbjct: 138 PGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEA 197
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+DMY KCG++ +AR VFD + D + W++MI Y + G +AL LF+ P
Sbjct: 198 ALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAP 257
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGI--RLGLEDYTVINALVDMYAKCHVIADARYI 403
+ VT+ +++S A + GR+ H+ + ++ NA++ +A+ + + +
Sbjct: 258 DQVTLVTIISTLA-----SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGL 312
Query: 404 FETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
+ KD+ +W + P T S++SA A++ A G +HA + G L
Sbjct: 313 Y-----KDMRSW---------GLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHG-LD 357
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+NV+VG++L+N YAKCG A+ VFD EKN V W+AM+ G+ ++ +F M
Sbjct: 358 ANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYM 417
Query: 524 LNEEVQPNEVIFTTILSACSHTG--MVGEGWKCF-YSMCRDFK-FVPSMKHYVCMVDLLA 579
+ +Q +E F +IL AC++ +G+ C C D FV + +D+ +
Sbjct: 418 MRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVAN-----ATLDMYS 472
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH---PDKACY 636
+ G + +A +P + +S + A G + M+K+M LH PD +
Sbjct: 473 KYGAIGDAKALFSLIPYKDSIS-WNALTVGLAQNLEEEEAVCMLKRM-RLHGITPDDVSF 530
Query: 637 YVLV---SNLYASDGRWIRVNQVRELMKQRGL--SKSPGCSLVDL 676
+ SN+ A++ Q+ L + G+ + + G SL+DL
Sbjct: 531 STAINACSNIRATE----TGKQIHCLAIKYGICSNHAVGSSLIDL 571
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 193/618 (31%), Positives = 331/618 (53%), Gaps = 26/618 (4%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
ND T+ + + ++ A +FD M D + + VMI+ + LY + V+FY M
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+ D F + V+K+ + ++EG K+H ++K+G D +V L+ +Y K
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+ +VF+E ++++VSW SMI+GY+ L+LF M + + ++ + S + AC+
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ + GK +H + ++ IE +V T++LDMY K G + A +F+ + ++V+W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI Y ++G A F + P+ +T ++L ASA L GR +H +R
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMR 358
Query: 376 LGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
G + V+ AL+DMY +C + A IF+ +EK+VI+WNSII+
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 423 -----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
D ++ PD+ T+ S++ A A ++ G +HAY K S N + +L++ YA
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS-NTIILNSLVHMYA 477
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
CGD + AR F+ + K+ V+W+++I Y + G G S+ LFS+M+ V PN+ F +
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+L+ACS +GMV EGW+ F SM R++ P ++HY CM+DL+ R G A F+E MP
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
P ++G+ L+ + + E +++ ++ D YVL+ N+YA GRW VN+++
Sbjct: 598 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657
Query: 658 ELMKQRGLSKSPGCSLVD 675
LM+ +G+S++ S V+
Sbjct: 658 LLMESKGISRTSSRSTVE 675
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 31/369 (8%)
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K+ ++N +T L + + DA +FDE+ D W MI G+T G +A++
Sbjct: 57 KVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQ 116
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYA 392
++ +A + T V+ + A + +L G+ +H++ I+LG + D V N+L+ +Y
Sbjct: 117 FYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYM 176
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISG---LDDNVS--------------PDAVTLVS 435
K DA +FE E+D+++WNS+ISG L D S PD + +S
Sbjct: 177 KLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMS 236
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ AC+ + + ++G +H ++ + + + +V V T++L+ Y+K G+ A +F+ M ++
Sbjct: 237 ALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR 296
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKC 554
N V W+ MIG Y G + F M + +QP+ + +L A + + EG
Sbjct: 297 NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTI 352
Query: 555 F-YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV----SLFGAFLHG 609
Y+M R F+P M ++D+ G+L+ A + M E +V S+ A++
Sbjct: 353 HGYAMRRG--FLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQN 409
Query: 610 CGLYSRFDL 618
YS +L
Sbjct: 410 GKNYSALEL 418
>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 750
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 302/571 (52%), Gaps = 31/571 (5%)
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI-VKVGGPDSFVLTGLV 187
+ EF++ M K + + + +AC ELR + G +H + + + P + ++
Sbjct: 64 EAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVL 123
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
MY +C + + ++FDE D N VS T+MI+ Y + + + LF+RM E +
Sbjct: 124 QMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSS 183
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
+L+ + RAL G+ +H ++++ G+ N+ + T +++MYVKCG + A+ VFD++
Sbjct: 184 MYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQM 243
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTD-----KKWADFFPNHVTIASVLSASAQLGN 362
V+WT ++VGYTQ+G ALKLF D +W F + VL A A L
Sbjct: 244 AVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSF-----VFSVVLKACASLEE 298
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L G+ +H+ +LGLE + +V LVD Y KC A F+ E + ++W++IISG
Sbjct: 299 LRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 358
Query: 422 L------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
+ V ++ T S+ AC+ L +G +HA + K+ L+
Sbjct: 359 YCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 418
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
S Y +AL+ Y+KCG A VF++M + V W+A I G+ G+ +L LF M
Sbjct: 419 SQ-YGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 477
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
++ ++PN V F +L+ACSH G+V +G +M R + P++ HY CM+D+ AR+G
Sbjct: 478 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGL 537
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L+EAL FM+NMP EPD + FL GC + +LG++ +++ +L P+ YVL NL
Sbjct: 538 LDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPEDTAGYVLPFNL 597
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
Y G+W +V +LM +R L K CS +
Sbjct: 598 YTWAGKWEEAAEVMKLMNERMLKKELSCSWI 628
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/443 (27%), Positives = 218/443 (49%), Gaps = 23/443 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++ MY G ++ A +FD M + + S MI Y L V + M + +
Sbjct: 122 VLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPP 181
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +++ +LK+ R +D G ++H +++ G ++ + TG+V+MY KC + +++VFD
Sbjct: 182 SSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFD 241
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ K V+WT ++ GY Q A++ L LF + VE + ++ ACA L L
Sbjct: 242 QMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRF 301
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H + K+G+E + T L+D Y+KC + A F E+ + VSW+A+I GY Q
Sbjct: 302 GKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 361
Query: 325 SGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDY 381
++A+K F + + N T S+ A + L + N+G VH+ I+ L Y
Sbjct: 362 MSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 421
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDD 424
+AL+ MY+KC + DA +FE+ D++AW + ISG +
Sbjct: 422 GE-SALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 480
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P++VT ++V++AC+ G V+ G ++ ++ + +++ YA+ G
Sbjct: 481 GMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 540
Query: 485 A-RMVFDAMREKNTVTWSAMIGG 506
A R + + E + ++W + G
Sbjct: 541 ALRFMKNMPFEPDAMSWKCFLSG 563
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 186/365 (50%), Gaps = 12/365 (3%)
Query: 66 KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HA +I GL +N T +V+MY G + A+ VFD M ++ ++ Y
Sbjct: 202 RQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQA 261
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVL 183
+D ++ + + E D+FVFS VLKAC L ++ G ++H + K+G + V
Sbjct: 262 GRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVG 321
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFV 242
T LVD Y KC S+ + F E + N VSW+++I+GY Q +E + F +R + V
Sbjct: 322 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAV 381
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N T S+ AC+ L + G +H +K + + + +AL+ MY KCG + DA
Sbjct: 382 VLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHE 441
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VF+ + + D+V+WTA I G+ G +AL+LF PN VT +VL+A + G
Sbjct: 442 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 501
Query: 363 LNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWN 416
+ G+ M+ + ++ Y + ++D+YA+ ++ +A R++ E D ++W
Sbjct: 502 VEQGKHYLDTMLRKYNVAPTIDHY---DCMIDIYARSGLLDEALRFMKNMPFEPDAMSWK 558
Query: 417 SIISG 421
+SG
Sbjct: 559 CFLSG 563
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 182/552 (32%), Positives = 298/552 (53%), Gaps = 34/552 (6%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F +L++C + + + + +I+ G + ++ LV + A + + +RQ+FD+
Sbjct: 41 FISLLQSCKTSKQVHQ---IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIP 97
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
D N+ W SM GY Q++ +E + LF +M+ + N T ++ +C K+ AL +G+
Sbjct: 98 DPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQ 157
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H +++K G N + T L+DMY G + DA +F E+ ++V+WT+MI GY S
Sbjct: 158 VHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSAD 217
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI--RLGLEDYTVIN 385
A +LF D P + + S G + G MV + + + D N
Sbjct: 218 LVSARRLF------DLAPERDVVLWNIMVS---GYIEGGDMVEARKLFHEMPNRDVMFWN 268
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------------VS 427
++ YA + +FE E+++ +WN++I G N V
Sbjct: 269 TVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVP 328
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+ TLV+V+SACA LGA+ +G +H Y+ GL NVYVG AL++ YAKCG ++A
Sbjct: 329 PNDATLVTVLSACARLGALDLGKWVHVYAESSGL-KGNVYVGNALMDMYAKCGIIENAIS 387
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF M K+ ++W+ +IGG M G +L LF M N +P+ + F IL AC+H G+
Sbjct: 388 VFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGL 447
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V +G+ F SM D+ +P ++HY CMVD+LARAGRLE+A+ F+ MP+E D ++ L
Sbjct: 448 VEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGLL 507
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C +Y +L E+ +++++EL P YV++SN+Y GRW V +++ M+ G K
Sbjct: 508 GACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFKK 567
Query: 668 SPGCSLVDLDIA 679
PGCSL++++ A
Sbjct: 568 LPGCSLIEVNDA 579
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 241/494 (48%), Gaps = 52/494 (10%)
Query: 45 HSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVF 103
H L ++LL CK++ + A +I +G N+ KLV++ + + YAR +F
Sbjct: 34 HRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLF 93
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
D +P+P+ + M R Y ++ Y+++V + M+ + F F VLK+C ++ +
Sbjct: 94 DQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALI 153
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
EG +VHC ++K G + FV T L+DMY+ +G + ++F E ++NVV+WTSMI GY+
Sbjct: 154 EGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYI 213
Query: 223 QN----------DCAQE-GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
+ D A E +VL+N M G++EG G +V A + H+
Sbjct: 214 LSADLVSARRLFDLAPERDVVLWNIMVSGYIEG-----GDMVEA---RKLFHEMP----- 260
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
+ +L Y GN+ +F+E+ ++ SW A+I GY +G +
Sbjct: 261 ------NRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEV 314
Query: 332 LKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
L F +D PN T+ +VLSA A+LG L++G+ VH GL+ + V NAL+D
Sbjct: 315 LGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMD 374
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVT 432
MYAKC +I +A +F KD+I+WN++I GL + PD +T
Sbjct: 375 MYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGIT 434
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ ++ AC +G V+ G + L+ + +++ A+ G + A M
Sbjct: 435 FIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKM 494
Query: 493 R-EKNTVTWSAMIG 505
E + V W+ ++G
Sbjct: 495 PVEADGVIWAGLLG 508
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 328 bits (840), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 201/609 (33%), Positives = 320/609 (52%), Gaps = 24/609 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV+ Y + G AR VFD MP D S+ ++ N + +D M + +
Sbjct: 153 LVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVN 212
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVF 203
V+ AC RD G+ VH ++K G DS V G LVDMY K D+ SS +VF
Sbjct: 213 VASLVSVVPACGTERDEGFGLSVHGLVLK-SGLDSVVNLGNALVDMYGKFGDLESSMRVF 271
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ +KN VSW S + + ++ L +F M E V +TL SL+ A L H
Sbjct: 272 NGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFH 331
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +HGY ++ +E + + +L+DMY K G + A ++F+ + ++VSW AMI
Sbjct: 332 LGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLA 391
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYT 382
Q+G +A L + + PN T+ ++L A +++ ++ MG+ +H+ I L D
Sbjct: 392 QNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLF 451
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NAL+D+YAKC ++ A+ IF+ SEKD +++N++I G +
Sbjct: 452 VSNALIDVYAKCGQLSVAQDIFD-RSEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAG 510
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ DAV+ + +SACA+L A + G +H ++ LL+++ ++ +LL+ Y K G +A
Sbjct: 511 IEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRR-LLNTHPFLANSLLDLYTKGGMLATA 569
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+F+ + K+ +W+ MI GYGM G + LF M ++ V + V + +LSACSH
Sbjct: 570 SKIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHG 629
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V G K F M P HY CMVDLL RAG+L E++E + NMP + ++GA
Sbjct: 630 GLVDRGKKYFSQMIAQ-NIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGA 688
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ +L + + + EL P+ + YY L+ N+Y+ G W N+++ LMK R +
Sbjct: 689 LLGSCRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKV 748
Query: 666 SKSPGCSLV 674
K+P S V
Sbjct: 749 QKNPAYSWV 757
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 246/478 (51%), Gaps = 28/478 (5%)
Query: 164 EGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
+G ++H ++ G D F LV YA +R+VFDE +++VSW S+++
Sbjct: 129 KGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSAL 188
Query: 222 VQNDCAQEG-LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
+ N ++ + MR G + N +L S+V AC R G +HG +LK G++
Sbjct: 189 LTNGMLEDAKRAVVGMMRSG-IPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSV 247
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
+L AL+DMY K G++ + VF+ + + VSW + + + +G+ + L++F
Sbjct: 248 VNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSE 307
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
+ P VT++S+L A LG ++G+ VH IR +E D + N+L+DMYAK +
Sbjct: 308 HEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEK 367
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNVS-----------------PDAVTLVSVISACAS 442
A IFE ++V++WN++I+ L N + P++ TLV+++ AC+
Sbjct: 368 ASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSR 427
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
+ +V++G +HA+S + L+ S+++V AL++ YAKCG A+ +FD EK+ V+++
Sbjct: 428 VASVKMGKQIHAWSIHRSLM-SDLFVSNALIDVYAKCGQLSVAQDIFD-RSEKDDVSYNT 485
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD- 561
+I GY SL LF M + ++ + V F LSAC++ +G + + R
Sbjct: 486 LIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRL 545
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
P + + ++DL + G L A + N DV+ + + G G++ + D+
Sbjct: 546 LNTHPFLAN--SLLDLYTKGGMLATASKIF-NRITRKDVASWNTMILGYGMHGQIDVA 600
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 152/344 (44%), Gaps = 40/344 (11%)
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVS---WTAMIVGYTQSGYPDKALKLFTDKK 339
L ALL Y +I AR + + L S W ++ +G P +AL+++
Sbjct: 40 LAGALLLSYAALRDIPSARLILRH-HPLRLRSAFLWNSLSRALASAGLPSEALRVYNCMV 98
Query: 340 WADFFPNHVTIASVLSASAQLGNLNM-----GRMVHSLGIRLG--LEDYTVINALVDMYA 392
+ P+ T L A+A G +H+ +R G L D N LV YA
Sbjct: 99 RSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYA 158
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVS 435
ADAR +F+ +D+++WNS++S L N + + +LVS
Sbjct: 159 ARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVS 218
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V+ AC + G S+H K G L S V +G AL++ Y K GD +S+ VF+ M+EK
Sbjct: 219 VVPACGTERDEGFGLSVHGLVLKSG-LDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEK 277
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-----HTGMVGE 550
N V+W++ +G + G L +F M EV P V +++L A H G
Sbjct: 278 NEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVH 337
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
G+ +M D S ++D+ A+ G LE+A EN+
Sbjct: 338 GYSIRRAMESDIFIANS------LMDMYAKFGCLEKASAIFENI 375
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 307/549 (55%), Gaps = 22/549 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
FS++L+ C + R I + +++K G P + LVD KC +IG +RQ+FD
Sbjct: 49 TFSQLLRQCIDERSISGIKNIQAQMLKSGFPVELSGSKLVDASLKCGEIGYARQLFDGMP 108
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
++++V+W S+IA Y+++ ++E + ++ M V ++ TL S+ A + L + +
Sbjct: 109 ERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQR 168
Query: 268 LHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
HG + +G+E+++ V +AL+DMYVK G R+A+ V D + D+V TA+IVGY+Q G
Sbjct: 169 SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKG 228
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN- 385
+A+K F PN T ASVL + L ++ G+++H L ++ G E
Sbjct: 229 EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQT 288
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSP 428
+L+ MY +C ++ D+ +F+ + + W S+ISGL D+V P
Sbjct: 289 SLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKP 348
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
++ TL S + C++L + G +H +K G + Y G+ L+ Y KCG + AR+V
Sbjct: 349 NSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGF-DRDKYAGSGLIELYGKCGCSDMARLV 407
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
FD + E + ++ + MI Y G G +L LF M+N +QPN+V ++L AC+++G+V
Sbjct: 408 FDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLV 467
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
EG + F S +D K + + HY CMVD+L RAGRLEEA E + PD+ L+ L
Sbjct: 468 EEGCELFDSFRKD-KIMLTNDHYACMVDMLGRAGRLEEA-EMLITEVTNPDLVLWRTLLS 525
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C ++ + ++ E + +K+LE+ P +L+SNLYAS G+W RV +++ MK+ L K+
Sbjct: 526 ACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKN 585
Query: 669 PGCSLVDLD 677
P S V++D
Sbjct: 586 PAMSWVEID 594
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 232/519 (44%), Gaps = 37/519 (7%)
Query: 12 SRTKKPKL----QLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKA 67
++T P+L Q R T T H Q C++ +S +K
Sbjct: 21 TKTCSPELSINSQFRLLCITCDSLTTTHTFSQLLRQ--------CIDE----RSISGIKN 68
Query: 68 FHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
A ++ G + +KLV G + YAR +FD MP ++ +I +Y +
Sbjct: 69 IQAQMLKSGFPVELSGSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSIIAYYIKHRRS 128
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLTG 185
K+ VE Y+ M D + S V KA +L E + H V +G S FV +
Sbjct: 129 KEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSA 188
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
LVDMY K ++ V D +K+VV T++I GY Q E + F M V+ N
Sbjct: 189 LVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPN 248
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T S++ +C L+ + GK +HG ++K G E T+LL MY++C + D+ VF
Sbjct: 249 EYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLLVFK 308
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ + V+WT++I G Q+G + AL F PN T++S L + L
Sbjct: 309 CIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALRGCSNLAMFEE 368
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
GR VH + + G + D + L+++Y KC AR +F+T SE DVI+ N++I
Sbjct: 369 GRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQ 428
Query: 425 N-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
N + P+ VT++SV+ AC + G V+ G L K ++ +N +
Sbjct: 429 NGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKDKIMLTNDH 488
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+++ + G + A M+ + + V W ++
Sbjct: 489 YA-CMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLLSA 526
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 193/609 (31%), Positives = 304/609 (49%), Gaps = 84/609 (13%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ +LK CCE + + +H I+K + P++F+L L+ YAK I + +VFD+
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 71
Query: 208 DKNV-------------------------------VSWTSMIAGYVQNDCAQEGLVLFNR 236
N+ VSW S+I+GY + + +N
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNL 131
Query: 237 M--REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
M +G N+IT +L+ +K + G+ +HG+++K G + + L+DMY K
Sbjct: 132 MLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKM 191
Query: 295 GNIRDARSVFDELCSIDLV-------------------------------SWTAMIVGYT 323
G I AR VFDEL ++V SWT+MI G+T
Sbjct: 192 GMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFT 251
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT- 382
Q+G A+ +F + K + + T SVL+A + L G+ VH+ IR +D
Sbjct: 252 QNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIF 311
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V +ALVDMY KC I A +F+ + K+V++W +++ G N
Sbjct: 312 VASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD TL SVIS+CA+L +++ G+ HA + GL+S + V AL+ Y KCG + +
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISF-ITVSNALVTLYGKCGSIEDS 430
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+F+ + K+ VTW+A++ GY G ++ LF ML ++P++V F +LSACS
Sbjct: 431 HRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRA 490
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V +G + F SM + VP HY CM+DL +RAGR+EEA F+ MP PD +
Sbjct: 491 GLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWAT 550
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C Y D+G+ + ++EL P YVL+S++YA+ G+W V ++R+ M+ +GL
Sbjct: 551 LLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGL 610
Query: 666 SKSPGCSLV 674
K PGCS +
Sbjct: 611 RKEPGCSWI 619
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 155/513 (30%), Positives = 255/513 (49%), Gaps = 59/513 (11%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH- 144
++S Y G V +FD+MP D S+ +I Y L V+ Y M K
Sbjct: 81 ILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFN 140
Query: 145 -DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQ 201
+ FS +L + + G ++H +VK G S+V G LVDMY+K I +R+
Sbjct: 141 LNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFM-SYVFVGSPLVDMYSKMGMISCARK 199
Query: 202 VFDETLDKNVV-------------------------------SWTSMIAGYVQNDCAQEG 230
VFDE +KNVV SWTSMI G+ QN ++
Sbjct: 200 VFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDA 259
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+ +F M+ ++ +Q T GS++TAC + AL +GK +H YI++ + N + +AL+DM
Sbjct: 260 IDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDM 319
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KC NI+ A +VF ++ ++VSWTAM+VGY Q+GY ++A+K F+D + P+ T+
Sbjct: 320 YCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTL 379
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSE 409
SV+S+ A L +L G H+ + GL + TV NALV +Y KC I D+ +F S
Sbjct: 380 GSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISF 439
Query: 410 KDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
KD + W +++SG L + PD VT + V+SAC+ G V+ G+ +
Sbjct: 440 KDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQI 499
Query: 453 -HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQ 510
+ + G++ + T +++ +++ G + AR + M + ++W+ ++
Sbjct: 500 FESMINEHGIVPIQDHY-TCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFY 558
Query: 511 G--DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
G D G A F L+ + V+ +++ +A
Sbjct: 559 GNMDIGKWAAEFLMELDPHNTASYVLLSSVYAA 591
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/410 (30%), Positives = 207/410 (50%), Gaps = 40/410 (9%)
Query: 80 DKCNTKLVSMYGSF-------GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE 132
D+ K V MY + G V+ ++ +F M D S+ MI + N L +D ++
Sbjct: 202 DELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAID 261
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYA 191
++ M+ + D + F VL AC + + EG +VH I++ D+ FV + LVDMY
Sbjct: 262 IFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYC 321
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC++I S+ VF + KNVVSWT+M+ GY QN ++E + F+ M++ +E + TLGS
Sbjct: 322 KCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGS 381
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
++++CA L +L +G H L G+ + AL+ +Y KCG+I D+ +F+E+ D
Sbjct: 382 VISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKD 441
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR---- 367
V+WTA++ GY Q G ++ + LF P+ VT VLSA ++ G + G
Sbjct: 442 EVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFE 501
Query: 368 -MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV 426
M++ GI + YT ++D++++ I +AR
Sbjct: 502 SMINEHGIVPIQDHYT---CMIDLFSRAGRIEEARNFINKMP-----------------F 541
Query: 427 SPDAVTLVSVISACASLGAVQVGS-------SLHAYSTKQGLLSSNVYVG 469
SPDA++ +++S+C G + +G L ++T +L S+VY
Sbjct: 542 SPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAA 591
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 131/259 (50%), Gaps = 6/259 (2%)
Query: 66 KAFHALLI-VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA +I D N + LV MY ++K A +VF M + S+ M+ Y N
Sbjct: 295 KQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQN 354
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL- 183
++ V+ + M+K E D+F V+ +C L ++EG + H + G SF+
Sbjct: 355 GYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARAL-TSGLISFITV 413
Query: 184 -TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
LV +Y KC I S ++F+E K+ V+WT++++GY Q A E + LF M +
Sbjct: 414 SNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGL 473
Query: 243 EGNQITLGSLVTACAKLRALHQGKWL-HGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ +++T +++AC++ + +G + I + GI T ++D++ + G I +AR
Sbjct: 474 KPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEAR 533
Query: 302 SVFDELC-SIDLVSWTAMI 319
+ +++ S D +SW ++
Sbjct: 534 NFINKMPFSPDAISWATLL 552
>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/538 (33%), Positives = 296/538 (55%), Gaps = 21/538 (3%)
Query: 156 CCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSW 214
C + + +G +H ++ G G D + T L+ Y K D+ ++R VFD +++VVSW
Sbjct: 161 CIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSW 220
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
T+M++GY QN ++ VLF+ MR V+ NQ T GS + AC LR L G + G I K
Sbjct: 221 TAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQK 280
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
N + +AL+D + KCG + DA +F + D+VSW AMI GY G+ D + +
Sbjct: 281 GRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCM 340
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINAL-VDMYAK 393
F P+ T+ SVL ASA+ G L + +H + +LG Y ++ L ++ YAK
Sbjct: 341 FRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAK 400
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDD------------------NVSPDAVTLVS 435
+ A+ + + +KD+ + ++I+G N+ D V L S
Sbjct: 401 NGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCS 460
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+++ CA+L + +G+ +HA++ K S +V +G AL++ YAK G+ + A+ FD M EK
Sbjct: 461 MLNICANLASFALGTQIHAFALKY-QPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEK 519
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
N ++W+++I GY G G +++L+ M ++ +PN+V F ++L ACSHTG+ EG +CF
Sbjct: 520 NVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECF 579
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+M + P +HY CMVDL AR G LEEA + + I+ + SL+GA L +Y
Sbjct: 580 NNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGY 639
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
LG+ + + P+ + YV+++++Y++ G W ++R+LM++R K+ G S
Sbjct: 640 MSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSF 697
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 237/508 (46%), Gaps = 25/508 (4%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H LI +G +D NTKL+ Y G V AR+VFD MP S+ M+ Y N +
Sbjct: 174 HTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRF 233
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGL 186
+ + MR + + F + L+AC LR +D G++V I K ++ FV + L
Sbjct: 234 EKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSAL 293
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VD ++KC + + +F ++++VVSW +MI GY A + +F M G + +
Sbjct: 294 VDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDC 353
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
TLGS++ A A+ L +HG I ++G + L++ Y K G++R A+ +
Sbjct: 354 YTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKG 413
Query: 307 LCSIDLVSWTAMIVGYTQSG-YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ DL S TA+I GY G Y AL LF + + + V + S+L+ A L + +
Sbjct: 414 MLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFAL 473
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
G +H+ ++ D + NAL+DMYAK I DA+ F+ EK+VI+W S+ISG
Sbjct: 474 GTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAK 533
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
P+ VT +S++ AC+ G G + +
Sbjct: 534 HGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAE 593
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ +++ +A+ G + A + + K N W A++G + G S++ N
Sbjct: 594 HYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFN- 652
Query: 527 EVQP-NEVIFTTILSACSHTGMVGEGWK 553
+QP N V + + S S G+ + WK
Sbjct: 653 -MQPENSVNYVVLASIYSAAGLWDDAWK 679
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 197/587 (33%), Positives = 315/587 (53%), Gaps = 60/587 (10%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F+K+L +C R VH I+ + F+ L+D+Y KC + +R++FD
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 208 DKNVV-------------------------------SWTSMIAGYVQNDCAQEGLVLFNR 236
+N SW SM++G+ Q+D +E L F +
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVK 137
Query: 237 M-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
M RE F+ N+ + GS ++ACA L L+ G +H + K + ++ +AL+DMY KCG
Sbjct: 138 MHREDFLL-NEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCG 196
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
++ A VF + +LV+W ++I Y Q+G +AL++F + P+ VT+ASV+S
Sbjct: 197 SVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVS 256
Query: 356 ASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
A A L L G +H+ ++ +D + NALVDMYAKC + +AR +F+ S ++V+
Sbjct: 257 ACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVV 316
Query: 414 AWNSIISGLDDNVSPDA-------VTLVSVISACASL-GAVQVGSSLHA----------- 454
+ S++SG S A +T +V+S A + G Q G + A
Sbjct: 317 SETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRES 376
Query: 455 ----YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+ T LL S+++VG +L++ Y KCG + VF+ M+E++ V+W+A+I GY
Sbjct: 377 IWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQN 436
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L +F ML +P+ V +L ACSH G+V EG F+SM + +P H
Sbjct: 437 GYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDH 495
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVDLL RAG L EA +E MP+ PD ++G+ L C ++ ++G+ +K+LE+
Sbjct: 496 YTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEID 555
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
P + YVL+SN+YA GRW V +VR+LM+Q+G++K PGCS ++++
Sbjct: 556 PWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVE 602
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 136/479 (28%), Positives = 228/479 (47%), Gaps = 77/479 (16%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S+ G + A +F SMP PD S+ M+ + +D +++ +E++ M + +
Sbjct: 87 LISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLN 146
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ F L AC L D++ G +VH + K D ++ + L+DMY+KC + + +VF
Sbjct: 147 EYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFS 206
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+++N+V+W S+I Y QN A E L +F RM + +E +++TL S+V+ACA L AL +
Sbjct: 207 GMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKE 266
Query: 265 GKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRDARSVFD----------------- 305
G +H ++K + LV AL+DMY KC + +AR VFD
Sbjct: 267 GLQIHARVVKTN-KFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGY 325
Query: 306 --------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
++ ++VSW A+I GYTQ+G ++AL+LF K +P H T
Sbjct: 326 ARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFG 385
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
++L + D V N+L+DMY KC I D +FE E+D
Sbjct: 386 NLLKS-----------------------DIFVGNSLIDMYMKCGSIEDGSRVFEKMKERD 422
Query: 412 VIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA 454
++WN+II G N PD VT++ V+ AC+ G V+ G
Sbjct: 423 CVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFF 482
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ GL+ + T +++ + G A+ + +AM + V W +++ + G+
Sbjct: 483 SMEEHGLIPLKDHY-TCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGN 540
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 191/424 (45%), Gaps = 64/424 (15%)
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N L+ +C + R+ + +H IL + + L+D+Y KC + DAR +F
Sbjct: 14 NSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLF 73
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK------KW------------------ 340
D + + +W ++I T+SG+ D+A +LF W
Sbjct: 74 DRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLE 133
Query: 341 -------ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYA 392
DF N + S LSA A L +LNMG VH+L + D + +AL+DMY+
Sbjct: 134 YFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYS 193
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVS 435
KC +A A +F E++++ WNS+I+ +D + PD VTL S
Sbjct: 194 KCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLAS 253
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V+SACASL A++ G +HA K ++ +G AL++ YAKC AR VFD M +
Sbjct: 254 VVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIR 313
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
N V+ ++M+ GY + +FS M Q N V + +++ + G E + F
Sbjct: 314 NVVSETSMVSGYARAASVKAARFMFSKM----TQRNVVSWNALIAGYTQNGENEEALRLF 369
Query: 556 YSMCRD------FKFVPSMKHYV----CMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
+ R+ + F +K + ++D+ + G +E+ E M E D + A
Sbjct: 370 RLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMK-ERDCVSWNA 428
Query: 606 FLHG 609
+ G
Sbjct: 429 IIVG 432
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 185/624 (29%), Positives = 323/624 (51%), Gaps = 27/624 (4%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK--C 136
N ++S + G V AR +FD+MP+ ++ +++ WY N + + + ++ C
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKC 193
D+ F+ +L C + + +VH VK+G P V L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLV 253
R + + +F+E +K+ V++ ++I GY ++ E + LF +MR+ + + T ++
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
A L G+ LH + G ++ + +LD Y K + + R +FDE+ +D V
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
S+ +I Y+Q+ + +L F + + F + A++LS +A L +L MGR +H
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 374 IRLGLEDYT--VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
+ L D V N+LVDMYAKC + +A IF++ ++ ++W ++ISG
Sbjct: 378 L-LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
N+ D T +V+ A AS ++ +G LHA+ + G L NV+ G+ L++
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVD 495
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
YAKCG + A VF+ M ++N V+W+A+I + GDG ++ F+ M+ +QP+ V
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+L+ACSH G V +G + F +M + P KHY CM+DLL R GR EA + M+ M
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRV 653
P EPD ++ + L+ C ++ L E +K+ + + A YV +SN+YA+ G W +V
Sbjct: 616 PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKV 675
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
V++ M++RG+ K P S V+++
Sbjct: 676 RDVKKAMRERGIKKVPAYSWVEVN 699
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G +AR V+D M KNTV+ + MI G+ GD + LF M + V V +T ++
Sbjct: 62 GQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTV----VTWTILM 117
Query: 540 SACSHTGMVGEGWKCFYSMCR 560
+ E +K F MCR
Sbjct: 118 GWYARNSHFDEAFKLFRQMCR 138
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 66 KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA +I G L N + LV MY G +K A VF+ MP+ + S+ +I + N
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 125 -DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSF 181
D I F K + L+ D+ VL AC +++G + + + G P
Sbjct: 532 GDGEAAIGAFAKMIESGLQP-DSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK 590
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMI 218
++D+ + + ++ DE + + + W+S++
Sbjct: 591 HYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/513 (34%), Positives = 277/513 (53%), Gaps = 51/513 (9%)
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
++ + + + L L+ +R ++ + L+ A +KL AL+ G +HG K
Sbjct: 84 NQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASK 143
Query: 275 IGI-EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
G + + +AL+ MY CG I DAR +FD++ D+V+W MI GY+Q+ + D LK
Sbjct: 144 FGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLK 203
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL----GIRLGLEDYT------- 382
L+ + K + P+ + + +VLSA A GNL+ G+ +H G R+G T
Sbjct: 204 LYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYA 263
Query: 383 ---------------------VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
V A++ YAK ++ DAR+IF+ EKD++ W+++ISG
Sbjct: 264 NCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISG 323
Query: 422 LDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
++ + PD +T++SVISACA++GA+ +H Y+ K G
Sbjct: 324 YAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGF-GR 382
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ + AL++ YAKCG+ AR VF+ M KN ++WS+MI + M GD ++ALF M
Sbjct: 383 TLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMK 442
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ ++PN V F +L ACSH G+V EG K F SM + + P +HY CMVDL RA L
Sbjct: 443 EQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHL 502
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
+A+E +E MP P+V ++G+ + C + +LGE ++LEL PD V++SN+Y
Sbjct: 503 RKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIY 562
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
A + RW V VR+LMK +G+SK CS ++++
Sbjct: 563 AKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVN 595
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 149/552 (26%), Positives = 252/552 (45%), Gaps = 60/552 (10%)
Query: 47 LPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMY------GSFGHVKYAR 100
+PS LL CK+ +K HA ++ + N + + S + YA
Sbjct: 10 IPSPSEKGLLASCKTLRHVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYAL 69
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR 160
S+F +PNP ++R + ++ + Y +R+ D F F +LKA +L
Sbjct: 70 SLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLS 129
Query: 161 DIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
++ G+++H K G D F+ + L+ MYA C I +R +FD+ ++VV+W MI
Sbjct: 130 ALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMI 189
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
GY QN L L+ M+ E + I L ++++ACA L GK +H +I G
Sbjct: 190 DGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFR 249
Query: 279 INSHLVTALLDMYVKCGN-------------------------------IRDARSVFDEL 307
+ SH+ T+L++MY CG ++DAR +FD +
Sbjct: 250 VGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRM 309
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
DLV W+AMI GY +S P +AL+LF + + P+ +T+ SV+SA A +G L +
Sbjct: 310 VEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAK 369
Query: 368 MVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---- 422
+H+ + G + NAL+DMYAKC + AR +FE K+VI+W+S+I+
Sbjct: 370 WIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG 429
Query: 423 -------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
+ N+ P+ VT + V+ AC+ G V+ G + + +S
Sbjct: 430 DADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHY 489
Query: 470 TALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+++ Y + + A + + M N + W +++ Q G L F+ E+
Sbjct: 490 GCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMS--ACQNHGEIELGEFAATRLLEL 547
Query: 529 QPNEVIFTTILS 540
+P+ +LS
Sbjct: 548 EPDHDGALVVLS 559
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 324/614 (52%), Gaps = 26/614 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T LV MY + R +FD M + S+ ++ Y N L +++ M+
Sbjct: 143 TSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVN 202
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQV 202
+ F F+ VL A + I+ G++VH IVK G +FV L+ MY K +G + V
Sbjct: 203 PNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAV 262
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD + ++ V+W MI GY EG +F+RMR V+ ++ + + C++ R L
Sbjct: 263 FDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQREL 322
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVG 321
+ K LH ++K G E + TAL+ Y KC ++ +A +F + ++V+WTAMI G
Sbjct: 323 NFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGG 382
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
+ Q+ KA+ LF PNH T ++VL+ ++ +H+ I+ E
Sbjct: 383 FVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPS----SLLSQLHAQIIKAYYEKV 438
Query: 382 -TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------D 423
+V AL+D Y K + ++ +F + KD++AW+++++GL
Sbjct: 439 PSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVK 498
Query: 424 DNVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ V P+ T SVI+AC+S A V+ G +HA + K G S+ + V +ALL Y+K G+
Sbjct: 499 EGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGK-SNALCVSSALLTMYSKKGNI 557
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+SA VF E++ V+W++MI GYG GD +L +F M N+ + ++V F +L+AC
Sbjct: 558 ESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTAC 617
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H G+V EG K F M +D+ +HY CMVDL +RAG ++A++ + MP ++
Sbjct: 618 THAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTI 677
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ L C ++ +LG++ +K++ L P+ A YVL+SN++A G W VR+LM +
Sbjct: 678 WRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDE 737
Query: 663 RGLSKSPGCSLVDL 676
R + K GCS +++
Sbjct: 738 RKVKKEAGCSWIEI 751
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 147/537 (27%), Positives = 247/537 (45%), Gaps = 26/537 (4%)
Query: 97 KYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC 156
+YA +FD P D + ++ + N+ ++ + +K + D S LK C
Sbjct: 55 RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114
Query: 157 CELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWT 215
L D G +VHC+ +K G D V T LVDMY K D R +FDE KNVVSWT
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
S+++GY +N E + L N+M+ V N T +++ A A + G +H I+K
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN 234
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G E + + AL+ MY+K + DA +VFD + D V+W MI GY G+ + ++F
Sbjct: 235 GFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMF 294
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
+ A + + L +Q LN + +H ++ G E + AL+ Y+KC
Sbjct: 295 HRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKC 354
Query: 395 HVIADARYIFETT-SEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSV 436
+ +A +F + +V+ W ++I G N V P+ T +V
Sbjct: 355 SSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTV 414
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
++ S + S LHA K V TALL+ Y K G+ + VF ++ K+
Sbjct: 415 LAGKPS----SLLSQLHAQIIK-AYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKD 469
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V WSAM+ G D ++ +F ++ E V+PNE F+++++ACS + E K +
Sbjct: 470 IVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIH 529
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
+ ++ ++ + ++ G +E A + E D+ + + + G G +
Sbjct: 530 ATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQE-ERDIVSWNSMITGYGQH 585
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 200/639 (31%), Positives = 332/639 (51%), Gaps = 25/639 (3%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA +GL ++ + LV+MY + A+ VF+S+ + + M+ + N L
Sbjct: 332 HAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLA 391
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++++EF+ CM++ + D F F+ + AC L ++ G ++H ++K + FV L
Sbjct: 392 QEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANAL 451
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VDMYAK + +R+ F+ + VSW ++I GYVQ + E +F RM V ++
Sbjct: 452 VDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDE 511
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L S+V+ACA ++ L +G+ H ++K+G++ ++ ++L+DMYVKCG + AR VF
Sbjct: 512 VSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYS 571
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ S ++VS A+I GYT G+ ++A+ LF + + P VT A +L LN+G
Sbjct: 572 MPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLG 630
Query: 367 RMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGL- 422
R +H ++ G V +L+ +Y D+ +F E K ++ W ++ISG
Sbjct: 631 RQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYA 690
Query: 423 ----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
DN+ PD SV+ ACA + ++Q G +H+ G V
Sbjct: 691 QQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEV 750
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
++L++ YAKCGD + + VF M R N ++W++MI G G +L +F M
Sbjct: 751 TC-SSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQ 809
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
+ + P+EV F +LSACSH G V EG K F M ++K +P + H CMVD+L R G L
Sbjct: 810 QSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDHLGCMVDILGRWGFLN 869
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
EA EF+ + + D L+ L C + G+ K++EL P + YVL+S++YA
Sbjct: 870 EAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYA 929
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSF 684
W +R MK +G+ K PG S ++ + +S+
Sbjct: 930 ESENWSGAVSLRREMKLKGVKKLPGYSWIEPGRDSSYSW 968
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 283/586 (48%), Gaps = 87/586 (14%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V +Y G+V +A+ F + D +++ ++ Y + L+ +V+ + CM +
Sbjct: 82 IVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPN 141
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F F+ VL AC L+D++ G +VHC + K G G SF GL+DMYAKCR + +R VFD
Sbjct: 142 EFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFD 201
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
L+ + VSWT++IAGYV++ E + +F+RM+ +QITL ++V A
Sbjct: 202 GALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA--------- 252
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
YV G + DAR +F ++ + ++V+W MI G+ +
Sbjct: 253 --------------------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAK 286
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
G+ ++A+ F + K ++ SVLSA A L LN G MVH+ + GL+D +
Sbjct: 287 RGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYV 346
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+ALV+MYAKC + A+ +F + E++++ WN+++ G N
Sbjct: 347 GSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGP 406
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T S+ SACASL + G LH K +SN++V AL++ YAK G + AR
Sbjct: 407 QPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNK-FASNLFVANALVDMYAKSGALKEAR 465
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F+ M+ + V+W+A+I GY + + +F M++ V P+EV +I+SAC++
Sbjct: 466 KQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQ 525
Query: 547 MVGEGWKC---------------------FYSMC------RDFKFVPSMKHYVCMVDLLA 579
+ G +C Y C RD + ++ V + L+A
Sbjct: 526 ELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIA 585
Query: 580 --RAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGE 620
G LEEA+ + + ++P F L GC +LG
Sbjct: 586 GYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 183/640 (28%), Positives = 305/640 (47%), Gaps = 60/640 (9%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V+ Y + G + AR +F +PNP+ ++ VMI + ++ + F+ ++K +
Sbjct: 249 VVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFD 204
VL A L ++ G VH + K G D+ +V + LV+MYAKC + +++QVF+
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++N+V W +M+ G+ QN AQE + F+ M+ + ++ T S+ +ACA L L+
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G LH ++K N + AL+DMY K G +++AR F+ + D VSW A+IVGY Q
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
Y D+A +F P+ V++AS++SA A + L G+ H L +++GL+ T
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCA 548
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----LDDNV-----------S 427
++L+DMY KC V+ AR +F + ++V++ N++I+G L++ +
Sbjct: 549 GSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLK 608
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P VT ++ C + +G +H K G LSS+ V +LL Y +
Sbjct: 609 PTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSET 668
Query: 488 VFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS--- 543
+F ++ K V W+A+I GY Q +L + M ++ + P++ F ++L AC+
Sbjct: 669 LFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMS 728
Query: 544 -------------HTGMVGEGWKC-----FYSMCRD-------FKFVPSMKHYV---CMV 575
HTG + C Y+ C D F+ +P + + M+
Sbjct: 729 SLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788
Query: 576 DLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML---EL 629
LA+ G EEALE ME I PD F L C R G + M+ +L
Sbjct: 789 VGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKL 848
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
P +V L GRW +N+ E + + G P
Sbjct: 849 LPRVDHLGCMVDIL----GRWGFLNEAEEFINKLGCKADP 884
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 268/540 (49%), Gaps = 60/540 (11%)
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
L+ + +H + +K+G G + +VD+Y KC ++ +++ F K+V +W S+
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
++ Y+ + + F M V N+ T +++AC+ L+ ++ G+ +H + K G
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
S L+DMY KC +RDAR VFD ++D VSWTA+I GY + G+P +A+K+F
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVI 397
+ P+ +T+ +V++A LG L
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALGRL---------------------------------- 259
Query: 398 ADARYIFETTSEKDVIAWNSIISG-LDDNVSPDAV----------------TLVSVISAC 440
ADAR +F +V+AWN +ISG + +A+ +L SV+SA
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
ASL + GS +HA +TK+G L NVYVG+AL+N YAKC +A+ VF+++ E+N V W
Sbjct: 320 ASLSMLNYGSMVHAQATKEG-LDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLW 378
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
+AM+GG+ G + FS M QP+E FT+I SAC+ + G + M +
Sbjct: 379 NAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIK 438
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ KF ++ +VD+ A++G L+EA + E M I +VS + A + G D
Sbjct: 439 N-KFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVS-WNAIIVGYVQEEYNDEAF 496
Query: 621 VMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS--PGCSLVDL 676
M ++M+ + PD+ +VS A+ R Q L+ + GL S G SL+D+
Sbjct: 497 FMFRRMVSNGVLPDEVSLASIVSAC-ANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDM 555
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 163/593 (27%), Positives = 274/593 (46%), Gaps = 91/593 (15%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
C L+ MY +++ AR VFD N D S+ +I Y
Sbjct: 179 CQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYV------------------- 219
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
D F E +KV + +VG PD L +V+ Y + +R
Sbjct: 220 --RDGFPM--------------EAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADAR 263
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++F + + NVV+W MI+G+ + A+E + F +++ ++ + +LGS+++A A L
Sbjct: 264 KLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L+ G +H K G++ N ++ +AL++MY KC + A+ VF+ L ++V W AM+
Sbjct: 324 MLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-E 379
G+ Q+G + ++ F+ K P+ T S+ SA A L LN G +H++ I+
Sbjct: 384 GFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFAS 443
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
+ V NALVDMYAK + +AR FE D ++WN+II G +
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ V PD V+L S++SACA++ ++ G H K GL +S G++L++ Y KCG
Sbjct: 504 SNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTC-AGSSLIDMYVKCGVV 562
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+AR VF +M +N V+ +A+I GY M G ++ LF ++ ++P EV F +L C
Sbjct: 563 LAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGC 621
Query: 543 SHTGMVGEG---------WK-------------CFY----------SMCRDFKFVPSMKH 570
M+ G W C Y ++ + ++ +
Sbjct: 622 DGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVV 681
Query: 571 YVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ ++ A+ E+AL+F ++M I PD + F + L C S G+
Sbjct: 682 WTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQ 734
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 205/646 (31%), Positives = 337/646 (52%), Gaps = 31/646 (4%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
++L C S L K A +I G + T +V +Y GH+ A VF +PNP
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ VM+ Y ++ +E +K MR E +N + V+ AC + E +VH
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHA 375
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD---KNVVSWTSMIAGYVQNDC 226
+ K G DS V L+ MY+K DI S QVF++ D +N+V+ MI + Q+
Sbjct: 376 WVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKK 433
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ + LF RM + + ++ ++ SL++ L L+ GK +HGY LK G+ ++ + ++
Sbjct: 434 PGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSS 490
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L +Y KCG++ ++ +F + D W +MI G+ + GY +A+ LF++ P+
Sbjct: 491 LFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPD 550
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFE 405
T+A+VL+ + +L G+ +H +R G++ + +ALV+MY+KC + AR +++
Sbjct: 551 ESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
E D ++ +S+ISG + + D+ + S++ A A +
Sbjct: 611 RLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSL 670
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G+ +HAY TK GL + VG++LL Y+K G F + + + W+A+I Y
Sbjct: 671 GAQVHAYITKIGLCTEPS-VGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G +L +++ M + +P++V F +LSACSH G+V E + SM +D+ P
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPEN 789
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HYVCMVD L R+GRL EA F+ NM I+PD ++G L C ++ +LG+V KK +E
Sbjct: 790 RHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIE 849
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
L P A Y+ +SN+ A G W V + R+LMK G+ K PG S V
Sbjct: 850 LEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 175/621 (28%), Positives = 291/621 (46%), Gaps = 67/621 (10%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A VF + + Y + +I N Y + + + M ++ D++ +S VL AC
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 159 LRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
L + G V ++K G D FV T +VD+YAKC + + +VF + +VVSWT M+
Sbjct: 264 LEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
+GY +++ A L +F MR VE N T+ S+++AC + + + +H ++ K G
Sbjct: 324 SGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 383
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW-TAMIVGYTQSGYPDKALKLFTD 337
++S + AL+ MY K G+I + VF++L I + MI ++QS P KA++LFT
Sbjct: 384 LDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTR 443
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHV 396
+ ++ S+LS L LN+G+ VH ++ GL D TV ++L +Y+KC
Sbjct: 444 MLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 397 IADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISA 439
+ ++ +F+ KD W S+ISG LDD SPD TL +V++
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C+S ++ G +H Y+ + G + + +G+AL+N Y+KCG + AR V+D + E + V+
Sbjct: 561 CSSHPSLPRGKEIHGYTLRAG-IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVS 619
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC----------------S 543
S++I GY G LF DM+ + ++IL A +
Sbjct: 620 CSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYIT 679
Query: 544 HTGM-----VGEGWKCFYSM-------CRDFKFV--PSMKHYVCMVDLLARAGRLEEALE 589
G+ VG YS C+ F + P + + ++ A+ G+ EAL+
Sbjct: 680 KIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQ 739
Query: 590 ---FMENMPIEPDVSLFGAFLHGC---GLY--SRFDLGEVMIKKMLELHPDKACYYVLVS 641
M+ +PD F L C GL S F L ++ K + P+ Y +V
Sbjct: 740 VYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV--KDYGIEPENRHYVCMVD 797
Query: 642 NLYASDGRWIRVNQVRELMKQ 662
L GR R+ + +
Sbjct: 798 AL----GRSGRLREAESFINN 814
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 262/529 (49%), Gaps = 24/529 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S Y + G + A +FD++P PD S +MI Y + L+++ + F+ M E +
Sbjct: 90 LLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEAN 149
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ V+ AC L+ V C +K+G V + L+D+++K + +VF
Sbjct: 150 EISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR 209
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++L NV W ++IAG ++N LF+ M GF + + T S++ ACA L L
Sbjct: 210 DSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRF 269
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK + ++K G E + + TA++D+Y KCG++ +A VF + + +VSWT M+ GYT+
Sbjct: 270 GKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTK 328
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
S AL++F + + + N+ T+ SV+SA + + VH+ + G D +V
Sbjct: 329 SNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSV 388
Query: 384 INALVDMYAKCHVIADARYIFETTSE---KDVIAWNSIISGLDDNVSP-DAVTL------ 433
AL+ MY+K I + +FE + ++++ N +I+ + P A+ L
Sbjct: 389 AAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQ 446
Query: 434 -------VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
SV S + L + +G +H Y+ K GL+ ++ VG++L Y+KCG + +
Sbjct: 447 EGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLV-LDLTVGSSLFTLYSKCGSLEESY 505
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F + K+ W++MI G+ G ++ LFS+ML++ P+E +L+ CS
Sbjct: 506 KLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHP 565
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+ G K + M +V++ ++ G L+ A + + +P
Sbjct: 566 SLPRG-KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 226/481 (46%), Gaps = 36/481 (7%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D F+ L+ Y+ + + ++FD +VVS MI+GY Q+ +E L F++M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
E N+I+ GS+++AC+ L+A + + + +K+G + +AL+D++ K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DA VF + S ++ W +I G ++ LF + P+ T +SVL+A A
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L L G++V + I+ G ED V A+VD+YAKC +A+A +F V++W +
Sbjct: 263 SLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+SG + V + T+ SVISAC V S +HA+ K G
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 462 -LSSNVYVGTALLNFYAKCGDAQSARMVF---DAMREKNTVTWSAMIGGYGMQGDGGGSL 517
L S+ V AL++ Y+K GD + VF D ++ +N V + MI + G ++
Sbjct: 383 YLDSS--VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAI 438
Query: 518 ALFSDMLNEEVQPNEVIFTTILSA--CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
LF+ ML E ++ +E ++LS C + G G+ + D S +
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS------LF 492
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDK 633
L ++ G LEE+ + + +P + D + + + + G Y + +ML+ PD+
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDE 551
Query: 634 A 634
+
Sbjct: 552 S 552
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
L A+ ++ LL +V++ +LL++Y+ G A +FD + + + V+ + MI GY
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
SL FS M + NE+ + +++SACS
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACS 161
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 198/614 (32%), Positives = 310/614 (50%), Gaps = 62/614 (10%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S Y + G++ AR +F+ P + ++ ++ Y N + + + M ++
Sbjct: 74 MISAYANLGNLVEARKLFNETPIKNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPS 133
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ VL+AC L + G +HC +K+ + FV TGLVDMY+KC+ + + +F
Sbjct: 134 QYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFF 193
Query: 205 ETLD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D KN V WT+M+ GY QN + + + F MR +E N T S++TAC + A
Sbjct: 194 SLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYA 253
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +HG I+ G N ++ +AL+DMY KCG++ AR + D + D+V W +MIVG
Sbjct: 254 FGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCV 313
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YT 382
GY ++AL LF D + T SVL + A NL +G VHSL I+ G + T
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKT 373
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NALVDMYAK ++ A +F +KDVI+W S+++G N
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTAR 433
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHA---YSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V D + V SACA L ++ G +HA S+ LLS+ +L+ YAKCG
Sbjct: 434 VDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAE----NSLITMYAKCGCL 489
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ A VFD+M +N ++W+A+I GY
Sbjct: 490 EDAIRVFDSMETRNVISWTAIIVGY----------------------------------- 514
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+ G+V G F SM + + P+ HY CM+DLL RAG++ EA + M +EPD ++
Sbjct: 515 AQNGLVETGQSYFESMEKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATI 574
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ + L C ++ +LGE K +++L P + YVL+SN+++ GRW +R MK
Sbjct: 575 WKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKT 634
Query: 663 RGLSKSPGCSLVDL 676
G++K PG S +++
Sbjct: 635 MGINKEPGYSWIEM 648
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 173/592 (29%), Positives = 275/592 (46%), Gaps = 77/592 (13%)
Query: 21 LRFFS--YTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLT 78
LR FS +++ Q P+Q+ L L + L+LL TG + +A+ I
Sbjct: 119 LRQFSQMWSDGQKPSQYTLGSV------LRACSTLSLL----HTGKMIHCYAIKI-QLEA 167
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
N T LV MY + A +F S+P+ ++ + M+ Y N ++ +K M
Sbjct: 168 NIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEM 227
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
R + E ++F F +L AC + G +VH I+ G GP+ +V + LVDMYAKC D+
Sbjct: 228 RNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDL 287
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
S+R + D +VV W SMI G V + +E LVLF++M + + T S++ +
Sbjct: 288 ASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSL 347
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A + L G+ +H +K G + + AL+DMY K GN+ A VF+++ D++SWT
Sbjct: 348 ASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWT 407
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+++ GY +G+ +KAL+LF D + A + +A V SA A+L + GR VH+ I+
Sbjct: 408 SLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKS 467
Query: 377 GLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVS 435
+ N+L+ MYAKC + DA +F++ ++VI+W +II G N
Sbjct: 468 SAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQN---------- 517
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
G V+ G S K VY + YA
Sbjct: 518 --------GLVETGQSYFESMEK-------VYGIKPASDHYA------------------ 544
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
MI G G + L + M +V+P+ I+ ++LSAC G + G +
Sbjct: 545 ------CMIDLLGRAGKINEAEHLLNRM---DVEPDATIWKSLLSACRVHGNLELGERAG 595
Query: 556 YSMCRDFKFVPSMK-HYVCMVDLLARAGRLEEALEF---MENMPI--EPDVS 601
++ K PS YV + ++ + AGR E+A M+ M I EP S
Sbjct: 596 KNL---IKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYS 644
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 204/601 (33%), Positives = 321/601 (53%), Gaps = 29/601 (4%)
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+FD MP D S+ MI Y ++ + M++ D + FS++LK +
Sbjct: 3 LFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAKR 62
Query: 162 IDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
D G +VH +VK G + +V + LVDMYAKC + + F E L+ N VSW ++IAG
Sbjct: 63 FDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIAG 122
Query: 221 YVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
+VQ + L M + V + T L+T + K +H +LK+G+E
Sbjct: 123 FVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLEH 182
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTD- 337
+ A++ Y CG + DA+ VFD L S DL+SW +MI G ++ + A +LFT+
Sbjct: 183 EITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEM 242
Query: 338 -KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAK-- 393
+ W + + T ++SA + + + G+ +H L I+ GLE T V NAL+ MY +
Sbjct: 243 HRNWIE--TDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFP 300
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDDN-VSPDAVTLV----------------SV 436
V+ DA +FE+ KD+++WNSI++G N +S DAV +V
Sbjct: 301 TGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAV 360
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK- 495
+ +C+ L +Q+G HA +TK SN +V ++L+ Y+KCG ++AR F+ + K
Sbjct: 361 LRSCSDLATLQLGQQTHALATKSSF-ESNEFVTSSLILMYSKCGVIENARKCFEQISSKH 419
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
NT+ W+AMI GY G G SL LFS M N+ V+ + V FT IL+ACSHTG++ EG +
Sbjct: 420 NTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 479
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
SM +K P M+HY VDLL RAG + + E +E+MP+ PD + FL C
Sbjct: 480 NSMEPVYKIQPRMEHYAAAVDLLGRAGLVNKVKELIESMPLNPDPMVLKTFLGVCRACGE 539
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
++ + +LE+ P+ YV +S++Y+ +W V+++MK+RG+ K PG S ++
Sbjct: 540 IEMATQVANHLLEIEPEDHFAYVSLSHMYSDLKKWEEKANVKKMMKERGVKKVPGWSWIE 599
Query: 676 L 676
+
Sbjct: 600 I 600
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 237/529 (44%), Gaps = 66/529 (12%)
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++FDE ++ VSW +MI+GY + LF M+ + + L+ A +
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
G+ +HG ++K G E N ++ ++L+DMY KC + DA F E+ + VSW A+I
Sbjct: 62 RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121
Query: 321 GYTQSGYPDKALKLFTDKKW-ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
G+ Q A L + A + T A +L+ N+ + VH+ ++LGLE
Sbjct: 122 GFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLE 181
Query: 380 -DYTVINALVDMYAKCHVIADARYIFE-TTSEKDVIAWNSIISGLDDN------------ 425
+ T+ NA++ YA C +++DA+ +F+ KD+I+WNS+I+GL +
Sbjct: 182 HEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTE 241
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK-- 478
+ D T ++SAC+ G SLH K+G L V AL++ Y +
Sbjct: 242 MHRNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKG-LEQVTSVSNALISMYIQFP 300
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
G + A +F++++ K+ V+W++++ G+ G ++ F + + ++ ++ F+ +
Sbjct: 301 TGVMKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAV 360
Query: 539 LSACSHTGMVGEGWKC---------------------FYSMC-------RDFKFVPSMKH 570
L +CS + G + YS C + F+ + S KH
Sbjct: 361 LRSCSDLATLQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISS-KH 419
Query: 571 ----YVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+ M+ A+ G + +L+ M N ++ D F A L C G ++
Sbjct: 420 NTIAWNAMILGYAQHGSGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELL 479
Query: 624 KKM---LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
M ++ P Y V L GR VN+V+EL++ L+ P
Sbjct: 480 NSMEPVYKIQPRMEHYAAAVDLL----GRAGLVNKVKELIESMPLNPDP 524
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 113/205 (55%), Gaps = 5/205 (2%)
Query: 66 KAFHALLIVDGLTN-DKCNTKLVSMYGSF--GHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
K+ H L+I GL + L+SMY F G +K A S+F+S+ D S+ ++ +
Sbjct: 271 KSLHGLVIKKGLEQVTSVSNALISMYIQFPTGVMKDALSLFESLKPKDLVSWNSIMTGFS 330
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N L +D V+F++ +R E D++ FS VL++C +L + G + H K + F
Sbjct: 331 QNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLATLQLGQQTHALATKSSFESNEF 390
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
V + L+ MY+KC I ++R+ F++ K N ++W +MI GY Q+ Q L LF++M
Sbjct: 391 VTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMILGYAQHGSGQVSLDLFSQMCNQ 450
Query: 241 FVEGNQITLGSLVTACAKLRALHQG 265
V+ + +T +++TAC+ + +G
Sbjct: 451 NVKLDHVTFTAILTACSHTGLIQEG 475
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/526 (35%), Positives = 284/526 (53%), Gaps = 38/526 (7%)
Query: 183 LTGLVDMYAKCRDIGSSRQVFDE--------TLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
L L+ +Y+K D+ S+R +FD T N +M+ Y + E + L+
Sbjct: 61 LARLIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLY 120
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
M+ V N T ++ CA G+ +HG +++ G + + AL+DMY KC
Sbjct: 121 IYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKC 180
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G I DA VFD + D+V WTAMI Y Q+ P KAL LF + F + +T SV
Sbjct: 181 GEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVA 240
Query: 355 SASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
SA QLG+ M VH + G + D +V N++V MYAKC + AR +F+ E++ I
Sbjct: 241 SAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGI 300
Query: 414 AWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
+WNS++SG N P+ VT + ++SAC+ LG+ +G LH +
Sbjct: 301 SWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNF- 359
Query: 457 TKQGLLSSNVYVGT----ALLNFYAKCGDAQSARMVFD--AMREKNTVTWSAMIGGYGMQ 510
++SS + + T A+++ Y KCGD +A +F+ + E++ +W+ +I GYG+
Sbjct: 360 ----VISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVH 415
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L LFS M E V+PN++ FT+ILSACSH G++ EG KCF M + P MKH
Sbjct: 416 GHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKH 474
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVD+L RAG L EA ++ +P P ++GA L C ++ +LGE+ + +L
Sbjct: 475 YACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLE 534
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P+ YYVL+SN+YA+ +W V VR+ MK RGL K S+++
Sbjct: 535 PEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEF 580
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 148/460 (32%), Positives = 231/460 (50%), Gaps = 40/460 (8%)
Query: 35 HELDQTFASFHSLPSIPCLN-----LLGLCKSTGSLKAFHALLIVDG--LTNDKCNTKLV 87
H L T H + ++P L+ LL C S +LK H+ L G L +L+
Sbjct: 10 HHLSHT----HKVLALPSLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLI 65
Query: 88 SMYGSFGHVKYARSVFDSM--------PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
+Y G + AR++FD P+ + M+R Y + ++ Y M++
Sbjct: 66 ILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQR 125
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
+NF + VLK C G VH ++V+ G G D FV LVDMYAKC +IG
Sbjct: 126 MGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGD 185
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+ +VFD L ++VV WT+MI Y Q + + L+LF +M+E G++IT S+ +A +
Sbjct: 186 AHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQ 245
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L +HGY + G + + +++ MY KCGN+ AR VFD + + +SW +M
Sbjct: 246 LGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSM 305
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
+ GYTQ+G P AL LF + ++ PN VT ++SA + LG+ ++GR +H+ I +
Sbjct: 306 LSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKM 365
Query: 379 E-DYTVINALVDMYAKCHVIADARYIFETTS--EKDVIAWNSIISGLD------------ 423
+ D T+ NA++DMY KC + A +F E+DV +WN +ISG
Sbjct: 366 DIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELF 425
Query: 424 -----DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
+ V P+ +T S++SAC+ G + G A TK
Sbjct: 426 SRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK 465
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 9/176 (5%)
Query: 26 YTNQQTPTQ--HELDQTFASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTND 80
YT PT +Q AS + L ++ C GS + H +I + D
Sbjct: 309 YTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDID 368
Query: 81 KC-NTKLVSMYGSFGHVKYARSVFDS--MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
++ MY G + A +F++ + D S+ V+I Y ++ K+ +E + M
Sbjct: 369 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM 428
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
+ E ++ F+ +L AC IDEG K ++ K+ P+ +VDM +
Sbjct: 429 QVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGR 484
>gi|226505108|ref|NP_001141927.1| uncharacterized protein LOC100274076 [Zea mays]
gi|194706472|gb|ACF87320.1| unknown [Zea mays]
gi|413938142|gb|AFW72693.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
Length = 583
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 205/579 (35%), Positives = 306/579 (52%), Gaps = 28/579 (4%)
Query: 106 MPNPDFYSF-QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
MP P S ++R Y ++ + Y MR D+ F+ KAC LR
Sbjct: 1 MPQPASVSVSNTLLRSYSGLGFHRQALALYSQMR----HFDHLTFTFAAKACAGLRLRRH 56
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G VH + G G D++V +V MY +CRD+ ++ VF + VSW ++I G V+
Sbjct: 57 GRAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCVK 116
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ A+ L +F M + V ++ ++ S++ ACA+ R LH G+ +H + G+ +
Sbjct: 117 DGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAV 176
Query: 284 VTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWA 341
AL+DMY KCG++ DAR VFDE D+VSWT MI Y + + KA L ++ +
Sbjct: 177 KNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSS 236
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADA 400
+ PN VT+A +LSA A L + + H+L IRLGL D V ALVD YAKC +
Sbjct: 237 EAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVI 296
Query: 401 RYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASL 443
+ E S + WN+ ISG L ++V PD+ T+ SVI A A
Sbjct: 297 DMVVEKGSRR-TETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAES 355
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
+ +++H +G L S + T L++ YAK GD A +F + EK+ V W+ +
Sbjct: 356 ADLVQANNIHCCLLVRGCLVST-DIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTV 414
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I GYGM G ++ L+S M+ V PN V ++L +CSH GMV EG + F M
Sbjct: 415 IAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDMHGVHG 474
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+P+ +HY+C+VD+L RAGR+EEA +E+MP EP VS++ + L C L+ + GEV
Sbjct: 475 LMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAA 534
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
K + EL PD YVL+ +YA+ RW V +R +M++
Sbjct: 535 KHLFELEPDNVGNYVLLGKVYAAAERWSDVQHLRRVMEE 573
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 141/469 (30%), Positives = 219/469 (46%), Gaps = 34/469 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+A H + G +D +VSMY V A +VF ++P+ S+ +I +
Sbjct: 58 RAVHGRALAAGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCVKD 117
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVL 183
+ +E ++ M R D VL AC + RD+ G VH +V+ G V
Sbjct: 118 GRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVAVK 177
Query: 184 TGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGF 241
L+DMY KC + +R+VFDE + DK+VVSWT MI YV ND A + L + M
Sbjct: 178 NALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSE 237
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ N +T+ L++ACA L + K H +++G+ + + TAL+D Y KCG +
Sbjct: 238 AQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYM---- 293
Query: 302 SVFD---ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
V D E S +W A I GYTQ KAL LF P+ T+ASV+ A A
Sbjct: 294 GVIDMVVEKGSRRTETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYA 353
Query: 359 QLGNLNMGRMVH-SLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
+ +L +H L +R L + L+D+YAK + A +F+ EKDV+AW +
Sbjct: 354 ESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTT 413
Query: 418 IISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+I+G ++ V P+ VT+ S++ +C+ G V G L ++ G
Sbjct: 414 VIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEG--LRLFNDMHG 471
Query: 461 L--LSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGG 506
+ L N L++ + G + A R + D E WS+++G
Sbjct: 472 VHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGA 520
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 200/635 (31%), Positives = 314/635 (49%), Gaps = 77/635 (12%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N C +V+ Y AR +FD+MP D S+ M+ Y N + ++F++ M
Sbjct: 139 NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMA 198
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGS 198
+R D ++ ++ E+ D++ + K+ P++ ++ +A+ I
Sbjct: 199 ER----DVVSWNLMVDGFVEVGDLNSSWEF---FEKIPNPNTVSWVTMLCGFARFGKIAE 251
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R++FD+ +NVV+W +MIA YVQN E + LF M E N I+ +++ +
Sbjct: 252 ARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEM----PEKNSISWTTVINGYVR 307
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ L + + L + + TA++ YV+ + DAR +F+++ D+V W M
Sbjct: 308 MGKLDEARQLLNQMPYRNVAAQ----TAMISGYVQNKRMDDARQIFNQISIRDVVCWNTM 363
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I GY+Q G D+AL LF +MV
Sbjct: 364 IAGYSQCGRMDEALHLFK------------------------------QMVK-------- 385
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS----------- 427
+D N +V YA+ + A IFE EK++++WNS+ISGL N S
Sbjct: 386 KDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLM 445
Query: 428 ------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
PD T +S+CA L A+QVG LH K G +++++V AL+ YAKCG
Sbjct: 446 GHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGY-ATDLFVSNALITMYAKCGS 504
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
SA ++F + + V+W+++I Y + G+G +L LF M E V P+EV F ILSA
Sbjct: 505 ISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSA 564
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH G++ +G K F M + + P +HY CMVDLL RAGRLEEA + + M I +
Sbjct: 565 CSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAG 624
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++GA L C ++ +L + +K+LE P K YVL+SN+ A GRW V +VR LMK
Sbjct: 625 IWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMK 684
Query: 662 QRGLSKSPGCSLVDLD------IANDFSFSRVVSL 690
++G K PG S ++L ++ D + R V L
Sbjct: 685 EKGAEKQPGWSWIELQNRVHAFLSEDPAHPRAVEL 719
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 225/502 (44%), Gaps = 53/502 (10%)
Query: 139 KRLKEHDNFVFSKVLK--ACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDI 196
K + EH ++VF LK + IDE +KV + ++ ++ +AK I
Sbjct: 6 KSVGEHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTH---KNTVTHNSMISAFAKNGRI 62
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFVEGNQITLGSLVT 254
+RQ+FD +N+VSW SMIA Y+ ND +E LF++M R+ + IT +
Sbjct: 63 SDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNG 122
Query: 255 ACAKLRALHQ---GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
AK R L KW N A++ Y K +AR +FD + + D
Sbjct: 123 ELAKARNLFNLLPYKW------------NPVCCNAMVAGYAKNRQFDEARRLFDAMPAKD 170
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
LVSW +M+ GYT++G L+ F + D V+ ++ ++G+LN S
Sbjct: 171 LVSWNSMLTGYTRNGEMRLGLQFFEEMAERDV----VSWNLMVDGFVEVGDLN-----SS 221
Query: 372 LGIRLGLEDYTVINALVDM--YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPD 429
+ + ++ + + +A+ IA+AR +F+ ++V+AWN++I+ N D
Sbjct: 222 WEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVD 281
Query: 430 -AVTLVSVISACASL-------GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
A++L + S+ G V++G A + NV TA+++ Y +
Sbjct: 282 EAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKR 341
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
AR +F+ + ++ V W+ MI GY G +L LF M+ +++ V + T++++
Sbjct: 342 MDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDI----VSWNTMVAS 397
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE---FMENMPIEP 598
+ G + K F M ++ + ++ L + G +AL+ M + +P
Sbjct: 398 YAQVGQMDAAIKIFEEMKEK-----NIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKP 452
Query: 599 DVSLFGAFLHGCGLYSRFDLGE 620
D S F L C + +G+
Sbjct: 453 DQSTFACGLSSCAHLAALQVGK 474
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 298/603 (49%), Gaps = 83/603 (13%)
Query: 154 KACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV- 211
K CCE R+ + K+HC I+K + P++F+ L++ Y+K +I +R VFD+ N
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 212 ------------------------------VSWTSMIAGYVQNDCAQEGLVLFNRM-REG 240
VSW S+I+GYV E + +N M ++G
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+ N+IT +++ + + G+ +HG I+K G + ++L+DMY K G + A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 301 RSVFDE-------------------------------LCSIDLVSWTAMIVGYTQSGYPD 329
VFDE + D +SWT MI G Q+G
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALV 388
+A+ LF D + + T SVL+A L L G+ +H+L IR G + +ALV
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAV 431
DMY KC + A +F+ + K+V++W +++ G N + PD
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
TL SVIS+CA+L +++ G+ H + GL+S + V AL+ Y KCG + + +FD
Sbjct: 373 TLGSVISSCANLASLEEGAQFHCQALVSGLISF-ITVSNALITLYGKCGSIEDSNQLFDE 431
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
M ++ V+W+A++ GY G ++ LF ML + ++P+ V F +LSACS G+V G
Sbjct: 432 MSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERG 491
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCG 611
+ F SM +D +P HY CM+DL RAGRLEEA F+ MP PD + L C
Sbjct: 492 QQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCR 551
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 671
LY ++G+ + +LEL P Y+L+S++YA+ G+W V Q+R M+++G K PG
Sbjct: 552 LYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGF 611
Query: 672 SLV 674
S +
Sbjct: 612 SWI 614
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 260/528 (49%), Gaps = 89/528 (16%)
Query: 72 LIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN-DL-- 126
LI+ LTN + L++ Y G++ YAR VFD MP P+ +S+ M+ Y + DL
Sbjct: 30 LIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLST 89
Query: 127 -------------------------YKDIVEFYKCMRKRLKEH----DNFVFSKVLKACC 157
Y +VE K +K+ + FS +L
Sbjct: 90 MQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVS 149
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV---- 212
+D G ++H +IVK G G FV + LVDMYAK + + QVFDE ++NVV
Sbjct: 150 SQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNT 209
Query: 213 ---------------------------SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
SWT+MI G +QN E + LF MR+ + +
Sbjct: 210 MITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMD 269
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
Q T GS++TAC LRAL +GK +H I++ G N + +AL+DMY KC ++R A +VF
Sbjct: 270 QYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFK 329
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ + ++VSWTAM+VGY Q+G+ ++A+++F D + P+ T+ SV+S+ A L +L
Sbjct: 330 RMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEE 389
Query: 366 GRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
G H + GL + TV NAL+ +Y KC I D+ +F+ S +D ++W +++SG
Sbjct: 390 GAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQ 449
Query: 422 --------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK-QGLLS-SN 465
L + PDAVT ++V+SAC+ G V+ G K G++ S+
Sbjct: 450 FGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSD 509
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
Y T +++ + + G + A+ + M +++ W+ ++ + G+
Sbjct: 510 HY--TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGN 555
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 137/259 (52%), Gaps = 6/259 (2%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H L+I G ++ + LV MY V+YA +VF M N + S+ M+ Y N
Sbjct: 290 KEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQN 349
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL- 183
++ V + M++ E D+F V+ +C L ++EG + HC+ + V G SF+
Sbjct: 350 GFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQAL-VSGLISFITV 408
Query: 184 -TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
L+ +Y KC I S Q+FDE ++ VSWT++++GY Q A E + LF RM +
Sbjct: 409 SNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGL 468
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILK-IGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + +T ++++AC++ + +G+ +LK GI S T ++D++ + G + +A+
Sbjct: 469 KPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAK 528
Query: 302 SVFDELC-SIDLVSWTAMI 319
+ +++ S D + W ++
Sbjct: 529 NFINKMPFSPDSIGWATLL 547
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/591 (32%), Positives = 311/591 (52%), Gaps = 28/591 (4%)
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
P S I+ + LY ++ + + +F V+KA + G ++
Sbjct: 14 PTCSSPSNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQL 73
Query: 169 HCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
HC +K G ++ V ++ MY K D+GS+RQVFD ++ ++W S+I GY+ N
Sbjct: 74 HCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYL 133
Query: 228 QEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL---KIGIEINSHL 283
+E L N + G V ++ L S+V+ C + G+ +H ++ +IG + L
Sbjct: 134 EEALEALNDVYLLGLVPKPEL-LASVVSMCGRRMGSKIGRQIHALVVVNERIGQSM--FL 190
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
TAL+D Y +CG+ A VFD + ++VSWT MI G D+A F +
Sbjct: 191 STALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGV 250
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKC-HVIADAR 401
PN VT ++LSA A+ G + G+ +H R G E + +ALV+MY +C + A
Sbjct: 251 CPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAE 310
Query: 402 YIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLG 444
IFE +S +DV+ W+SII + + P+ VTL++VISAC +L
Sbjct: 311 LIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLS 370
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+++ G LH Y K G S + VG AL+N YAKCG +R +F M ++ VTWS++I
Sbjct: 371 SLKHGCGLHGYIFKFGFCFS-ISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLI 429
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
YG+ G G +L +F +M V+P+ + F +LSAC+H G+V EG + F + D +
Sbjct: 430 SAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEI 489
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
+++HY C+VDLL R+G+LE ALE MP++P ++ + + C L+ R D+ E++
Sbjct: 490 PLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAP 549
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+++ P+ A Y L++ +YA G W+ QVRE MK + L K G S ++
Sbjct: 550 QLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFSRIE 600
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 145/538 (26%), Positives = 248/538 (46%), Gaps = 36/538 (6%)
Query: 35 HELDQTFASFH---------SLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NT 84
H+ Q F+ H LPS+ + C + G+ H L + G ++ +
Sbjct: 33 HQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGT--QLHCLALKTGSHSETVVSN 90
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
+++MY F V AR VFD+MP+ D ++ +I Y N ++ +E +
Sbjct: 91 SIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEALNDVYLLGLVP 150
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIV--KVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
+ + V+ C G ++H +V + G F+ T LVD Y +C D + +V
Sbjct: 151 KPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYFRCGDSLMALRV 210
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD KNVVSWT+MI+G + + E F M+ V N++T +L++ACA+ +
Sbjct: 211 FDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFV 270
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN-IRDARSVFDELCSIDLVSWTAMIVG 321
GK +HGY + G E +AL++MY +CG + A +F+ D+V W+++I
Sbjct: 271 KHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGS 330
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-ED 380
+++ G KALKLF + + PN+VT+ +V+SA L +L G +H + G
Sbjct: 331 FSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFS 390
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------D 423
+V NAL++MYAKC + +R +F +D + W+S+IS +
Sbjct: 391 ISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNE 450
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V PDA+T ++V+SAC G V G + + + L++ + G +
Sbjct: 451 RGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIPLTIEHYACLVDLLGRSGKLE 510
Query: 484 SARMVFDAMREKNTV-TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
A + M K + WS+++ + G + L ++ E PN T+L+
Sbjct: 511 YALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQLIRSE--PNNAGNYTLLN 566
>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
Length = 874
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 321/614 (52%), Gaps = 26/614 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T LV MY G V VF+ MP + ++ ++ ++ +++ + MR
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQV 202
+ F F+ VL A +D G +VH + VK G S FV L++MYAKC + ++ V
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ +++VSW +++AG N+C E L LF+ R + Q T +++ CA L+ L
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVG 321
+ LH +LK G + +++TAL D Y KCG + DA ++F S ++VSWTA+I G
Sbjct: 319 ALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISG 378
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Q+G A+ LF+ + PN T +++L AS + + +H+ I+ +
Sbjct: 379 CIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHI 434
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD---------------- 424
+ AL+ Y+K DA IF+ +KDV+AW++++S
Sbjct: 435 PFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAI 494
Query: 425 -NVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P+ T+ SVI ACA A V G HA S K + + V +AL++ Y++ G+
Sbjct: 495 QGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDA-ICVSSALVSMYSRKGNI 553
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
SA++VF+ +++ V+W++MI GY G ++ F M +Q + V F ++ C
Sbjct: 554 DSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGC 613
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H G+V EG + F SM RD K P+M+HY CMVDL +RAG+L+E + + +MP +
Sbjct: 614 THNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMV 673
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ L C ++ +LG+ K+L L P + YVL+SN+YA+ G+W ++VR+LM
Sbjct: 674 WRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDY 733
Query: 663 RGLSKSPGCSLVDL 676
R + K GCS + +
Sbjct: 734 RKVKKEAGCSWIQI 747
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 143/464 (30%), Positives = 234/464 (50%), Gaps = 26/464 (5%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQV 202
D+ S VLKAC + D G ++HC VK G V G LVDMY KC + +V
Sbjct: 98 DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEV 157
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ KNVV+WTS++ G E + LF RMR + N T S+++A A AL
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +H +K G + + +L++MY KCG + DA+SVF+ + + D+VSW ++ G
Sbjct: 218 DLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGL 277
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
+ +AL+LF + + T A+V+ A L L + R +HS ++ G
Sbjct: 278 QLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337
Query: 382 TVINALVDMYAKCHVIADARYIFE-TTSEKDVIAWNSIISGL-----------------D 423
V+ AL D Y+KC +ADA IF TT ++V++W +IISG +
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
D V P+ T +++ A S+ Q+ HA K +VGTALL Y+K G +
Sbjct: 398 DRVMPNEFTYSAMLKASLSILPPQI----HAQVIKTN-YQHIPFVGTALLASYSKFGSTE 452
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A +F + +K+ V WSAM+ + GD G+ LF+ M + ++PNE ++++ AC+
Sbjct: 453 DALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA 512
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ + F+++ +++ ++ +V + +R G ++ A
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 192/376 (51%), Gaps = 36/376 (9%)
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL-----FNRMREGFVEGNQIT 248
RD +R DE ++ ++ A V D A+ G+VL F+ R G V + T
Sbjct: 46 RDPPGARYPLDEIPRRD----AAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSAT 101
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGI---EINSHLVTALLDMYVKCGNIRDARSVFD 305
L ++ AC + G+ LH +K G E+++ T+L+DMY+KCG++ + VF+
Sbjct: 102 LSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAG--TSLVDMYMKCGSVCEGIEVFE 159
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ ++V+WT+++ G + + + LF + +PN T ASVLSA A G L++
Sbjct: 160 GMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDL 219
Query: 366 GRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
G+ VH+ ++ G V N+L++MYAKC ++ DA+ +F +D+++WN++++GL
Sbjct: 220 GQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQL 279
Query: 425 NVSP-----------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGL-LSSNV 466
N T +VI CA+L + + LH+ K G L+ NV
Sbjct: 280 NECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNV 339
Query: 467 YVGTALLNFYAKCGDAQSARMVFD-AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
TAL + Y+KCG+ A +F +N V+W+A+I G GD ++ LFS M
Sbjct: 340 M--TALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397
Query: 526 EEVQPNEVIFTTILSA 541
+ V PNE ++ +L A
Sbjct: 398 DRVMPNEFTYSAMLKA 413
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 12/220 (5%)
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D+ TL V+ AC S+ +G LH K G V GT+L++ Y KCG V
Sbjct: 98 DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEV 157
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+ M +KN VTW++++ G +ALF M E + PN F ++LSA + G +
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
G + + KF +VC ++++ A+ G +E+A M VS +
Sbjct: 218 DLGQRVH---AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVS-WNTL 273
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
+ G L E ++ + H +A + + YA+
Sbjct: 274 MAG------LQLNECELEALQLFHESRATMGKMTQSTYAT 307
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 8/152 (5%)
Query: 59 CKSTG--SLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
C S G + FHA+ I + C ++ LVSMY G++ A+ VF+ + D S+
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWN 572
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
MI Y + +E ++ M + D F V+ C + EG + +V+
Sbjct: 573 SMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVR- 631
Query: 176 GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ ++ YA D+ S DET+
Sbjct: 632 ----DHKINPTMEHYACMVDLYSRAGKLDETM 659
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/530 (33%), Positives = 296/530 (55%), Gaps = 54/530 (10%)
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFD + N++ W +M G+ + L L+ M + + T L+ +CAK +
Sbjct: 45 VFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKI 104
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+G+ +HG++LK+G +++ ++ T+L+ MY + G + DAR VFD D+VS+TA+I G
Sbjct: 105 RKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAG 164
Query: 322 YTQSGYPDKALKLFTD----------------------KKWADFF----------PNHVT 349
Y GY + A KLF + K+ + F P+ T
Sbjct: 165 YVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDEST 224
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTS 408
+ +V+SA AQ ++ +GR VHS G + ++NAL+D+Y+K + A +F+
Sbjct: 225 MVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLW 284
Query: 409 EKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSS 451
KDVI+WN++I G L +P+ VT++S++ ACA LGA+ +G
Sbjct: 285 NKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 344
Query: 452 LHAYSTKQ--GLLSSNVYVGTALLNFYAKCGDAQSARMVFDA-MREKNTVTWSAMIGGYG 508
+H Y K+ G++++ + T+L++ YAKCGD +A+ VFD+ M ++ TW+AMI G+
Sbjct: 345 IHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFA 404
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
M G + +FS M ++P+++ F +LSACSH+GM+ G F SM R ++ P +
Sbjct: 405 MHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKL 464
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY CM+DLL +G +EA E + MP+EPD ++ + L C ++ +LGE KK+++
Sbjct: 465 EHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIK 524
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS-PGCSLVDLD 677
+ P + YVL+SN+YA+ GRW V ++R L+ +G+ K PGCS +++D
Sbjct: 525 IEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEID 574
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 255/512 (49%), Gaps = 62/512 (12%)
Query: 62 TGSLKAFHALLIVDGLTN-DKCNTKLVS---MYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
+ S++ HA +I GL N + +KL+ + F YA SVFD++ P+ + M
Sbjct: 1 SSSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTM 60
Query: 118 IRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
R + L+ ++ Y M D++ F +LK+C + + EG ++H ++K+G
Sbjct: 61 FRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGF 120
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ-----------ND 225
D +V T L+ MYA+ + +R+VFD + ++VVS+T++IAGYV ++
Sbjct: 121 DLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDE 180
Query: 226 CAQEGLVLFNRMREGFVE-GN--------------------QITLGSLVTACAKLRALHQ 264
+ +V +N M G+VE GN + T+ ++V+ACA+ ++
Sbjct: 181 IPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIEL 240
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +I G N +V AL+D+Y K G + A +FD L + D++SW +I GYT
Sbjct: 241 GRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTH 300
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY--- 381
+AL LF + + PN VT+ S+L A A LG +++GR +H + I L+
Sbjct: 301 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH-VYINKKLKGVVTN 359
Query: 382 --TVINALVDMYAKCHVIADARYIFETT-SEKDVIAWNSIISGLD--------------- 423
++ +L+DMYAKC I A+ +F+++ S + + WN++ISG
Sbjct: 360 VSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRM 419
Query: 424 --DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+ + PD +T V ++SAC+ G + +G ++ T+ ++ + +++ G
Sbjct: 420 RMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGL 479
Query: 482 AQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ A + + M E + V W +++ + G+
Sbjct: 480 FKEAEEMINTMPMEPDGVIWCSLLKACKIHGN 511
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/408 (29%), Positives = 196/408 (48%), Gaps = 33/408 (8%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK- 142
T L++ Y S G+++ A+ +FD +P D S+ MI Y YK+ +E +K M
Sbjct: 159 TALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNV 218
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQ 201
D V+ AC + I+ G VH I G + ++ L+D+Y+K ++ ++ +
Sbjct: 219 RPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACE 278
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FD +K+V+SW ++I GY + +E L+LF M N +T+ S++ ACA L A
Sbjct: 279 LFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 338
Query: 262 LHQGKWLHGYILK--IGIEIN-SHLVTALLDMYVKCGNIRDARSVFD-ELCSIDLVSWTA 317
+ G+W+H YI K G+ N S L T+L+DMY KCG+I A+ VFD + + L +W A
Sbjct: 339 IDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNA 398
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSL 372
MI G+ G + A +F+ + P+ +T +LSA + G L++GR M
Sbjct: 399 MISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGY 458
Query: 373 GIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVT 432
I LE Y ++D+ + +A + T + PD V
Sbjct: 459 EITPKLEHY---GCMIDLLGHSGLFKEAEEMINTMP-----------------MEPDGVI 498
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
S++ AC G +++G S K +S YV L N YA G
Sbjct: 499 WCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYV--LLSNIYAAAG 544
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 210/634 (33%), Positives = 331/634 (52%), Gaps = 33/634 (5%)
Query: 68 FHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
HAL G N + VS+Y + A VFD +P D ++ ++ Y N
Sbjct: 131 LHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNG 190
Query: 126 L----YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
+ I E Y+ K + + L AC L D+ G +H +VK G G
Sbjct: 191 ESEMGLECISEMYRVGDDSQKPNARTLEGGFL-ACGNLGDLVSGRCLHGLVVKNGIGCLL 249
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
+ + ++ MY KC + Q F E ++K+++SWTSMI Y + + + F M E
Sbjct: 250 DIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLEN 309
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V + + +G +++ ++ GK HG I++ + + +LL MY K G + A
Sbjct: 310 QVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFA 369
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F + W MIVGY + G K ++LF + ++ V I S +++ QL
Sbjct: 370 ERLFQR-SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQL 428
Query: 361 GNLNMGRMVHSLGIRLGLEDYT--VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
G +N+GR +H I+ G D T V N+L++MY KC + + IF SE+DVI WN++
Sbjct: 429 GEINLGRSIHCNVIK-GFVDETISVTNSLIEMYGKCDKMNVSWRIF-NRSERDVILWNAL 486
Query: 419 ISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
IS + ++ +P+ TLV V+SAC+ L ++ G LH Y ++G
Sbjct: 487 ISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGF 546
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
N+ +GTAL++ YAKCG + +R VFD+M EK+ + W+AMI GYGM G ++ +F+
Sbjct: 547 -KLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFN 605
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
M V+PNE+ F ++LSAC+H G+V EG F M + + P++KHY CMVDLL R+
Sbjct: 606 LMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHYTCMVDLLGRS 664
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
LEEA E + +MPI PD ++GA L C +++ ++G + K ++ P+ YY++V+
Sbjct: 665 CNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVA 724
Query: 642 NLYASDGRWIRVNQVRELMKQR-GLSKSPGCSLV 674
N+Y+S GRW VR MK R + K G S+V
Sbjct: 725 NMYSSIGRWDEAENVRRTMKDRCSMGKKAGWSMV 758
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 164/573 (28%), Positives = 282/573 (49%), Gaps = 29/573 (5%)
Query: 64 SLKAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
SL FHA+ + G TN KL+S+Y + H + ++F S+P D + + ++ F
Sbjct: 26 SLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLF 85
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDS 180
LY + FY MR ++F F V + I GM +H KVG +S
Sbjct: 86 SRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENS 145
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN---RM 237
V + V +Y++C ++ + +VFDE ++VV+WT+++ GYVQN ++ GL + R+
Sbjct: 146 AVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRV 205
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
+ + N TL AC L L G+ LHG ++K GI + +++L MY KCG
Sbjct: 206 GDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVP 265
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
R+A F E+ + DL+SWT+MI Y + G ++ F + P+ + I +LS
Sbjct: 266 REAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGF 325
Query: 358 AQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
++ G+ H L IR D V N+L+ MY K +++ A +F+ S+ + WN
Sbjct: 326 GNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQ-RSQGSIEYWN 384
Query: 417 SIISG---LDDNVS--------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+I G + NV ++V +VS I++C LG + +G S+H K
Sbjct: 385 FMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIK- 443
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G + + V +L+ Y KC + +F+ E++ + W+A+I + +++L
Sbjct: 444 GFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISL 502
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M+ E+ PN +LSACSH + +G + + + F ++ +VD+ A
Sbjct: 503 FDIMIMEDQNPNTATLVVVLSACSHLAFLEKGER-LHRYINEKGFKLNLPLGTALVDMYA 561
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ G+LE++ E ++M +E DV + A + G G+
Sbjct: 562 KCGQLEKSREVFDSM-MEKDVICWNAMISGYGM 593
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 216/437 (49%), Gaps = 32/437 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFD-SMPNPDFYSFQVMIRWYFL 123
KAFH L+I D+ + L+SMY FG + +A +F S + ++++F MI Y
Sbjct: 335 KAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRSQGSIEYWNF--MIVGYGR 392
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL 183
++ ++ M+ ++ + +C +L +I+ G +HC ++K ++ +
Sbjct: 393 IGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISV 452
Query: 184 TG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L++MY KC + S ++F+ + +++V+ W ++I+ ++ +E + LF+ M
Sbjct: 453 TNSLIEMYGKCDKMNVSWRIFNRS-ERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQ 511
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N TL +++AC+ L L +G+ LH YI + G ++N L TAL+DMY KCG + +R
Sbjct: 512 NPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSRE 571
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VFD + D++ W AMI GY +GY + A+++F + ++ PN +T S+LSA A G
Sbjct: 572 VFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGL 631
Query: 363 LNMGRMV----HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+ G+ V S ++ L+ YT +VD+ + + +A +
Sbjct: 632 VEEGKNVFAKMQSYSVKPNLKHYT---CMVDLLGRSCNLEEAEELV-------------- 674
Query: 419 ISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
L + PD +++SAC + +++G + + + Y+ A N Y+
Sbjct: 675 ---LSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVA--NMYSS 729
Query: 479 CGDAQSARMVFDAMREK 495
G A V M+++
Sbjct: 730 IGRWDEAENVRRTMKDR 746
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 161/364 (44%), Gaps = 32/364 (8%)
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
G L++ ++ L H + G N + L+ +Y + + ++F L
Sbjct: 12 GELISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPF 71
Query: 310 IDLVSWTAMI-VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
D W + + +++S YP + L ++ + + PNH T V S+ A + G
Sbjct: 72 KDTFLWNSFLKTLFSRSLYP-QFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMN 130
Query: 369 VHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---- 422
+H+L ++G E+ V ++ V +Y++C + DA +F+ +DV+AW +++ G
Sbjct: 131 LHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNG 190
Query: 423 ----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
DD+ P+A TL AC +LG + G LH K G + +
Sbjct: 191 ESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNG-IGCLL 249
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ +++L+ Y KCG + A F + K+ ++W++MI Y G + F +ML
Sbjct: 250 DIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLEN 309
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP------SMKHYVCMVDLLAR 580
+V P+ ++ ILS ++ V G K F+ + + P S+ C +L+
Sbjct: 310 QVCPDGMVIGCILSGFGNSVDV-YGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSF 368
Query: 581 AGRL 584
A RL
Sbjct: 369 AERL 372
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 283/521 (54%), Gaps = 30/521 (5%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
+ ++ LV + A + + +RQ+FD+ D N+ W SM GY Q++ +E + LF +M+
Sbjct: 132 NEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMK 191
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ N T ++ +C K+ AL +G+ +H +++K G N + T L+DMY G +
Sbjct: 192 GMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVG 251
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DA +F E+ ++V+WT+MI GY S A +LF D P + + S
Sbjct: 252 DAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLF------DLAPERDVVLWNIMVS- 304
Query: 359 QLGNLNMGRMVHS--LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
G + G MV + L + D N ++ YA + +FE E+++ +WN
Sbjct: 305 --GYIEGGDMVEARKLFXEMPNRDVMFWNTVLKGYATNGNVEALEGLFEEMPERNIFSWN 362
Query: 417 SIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
++I G N V P+ TLV+V+SACA LGA+ +G +H Y+
Sbjct: 363 ALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAES 422
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
GL NVYVG AL++ YAKCG ++A VF M K+ ++W+ +IGG M G +L
Sbjct: 423 SGL-KGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALN 481
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF M N +P+ + F IL AC+H G+V +G+ F SM D+ +P ++HY CMVD+L
Sbjct: 482 LFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDML 541
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
ARAGRLE+A F+ MP+E D ++ L C +Y +L E+ +++++EL P YV
Sbjct: 542 ARAGRLEQAXAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYV 601
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
++SN+Y GRW V +++ M+ G K PGCSL++++ A
Sbjct: 602 MLSNIYGDAGRWEDVARLKVAMRDTGFKKLPGCSLIEVNDA 642
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 141/483 (29%), Positives = 237/483 (49%), Gaps = 58/483 (12%)
Query: 59 CKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
CK++ + A +I +G N+ KLV++ + + YAR +FD +P+P+ + M
Sbjct: 111 CKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSM 170
Query: 118 IRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
R Y ++ Y+++V + M+ + F F VLK+C ++ + EG +VHC ++K G
Sbjct: 171 FRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGF 230
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN----------DC 226
+ FV T L+DMY+ +G + ++F E ++NVV+WTSMI GY+ + D
Sbjct: 231 RGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDL 290
Query: 227 AQE-GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV- 284
A E +VL+N M G++EG G +V A K+ E+ + V
Sbjct: 291 APERDVVLWNIMVSGYIEG-----GDMVEA-----------------RKLFXEMPNRDVM 328
Query: 285 --TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWA 341
+L Y GN+ +F+E+ ++ SW A+I GY +G + L F +
Sbjct: 329 FWNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSES 388
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADA 400
D PN T+ +VLSA A+LG L++G+ VH GL+ + V NAL+DMYAKC +I +A
Sbjct: 389 DVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENA 448
Query: 401 RYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASL 443
+F KD+I+WN++I GL + PD +T + ++ AC +
Sbjct: 449 ISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHM 508
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSA 502
G V+ G + L+ + +++ A+ G + A M E + V W+
Sbjct: 509 GLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAG 568
Query: 503 MIG 505
++G
Sbjct: 569 LLG 571
>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
Length = 874
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/614 (31%), Positives = 322/614 (52%), Gaps = 26/614 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T LV MY G V VF+ MP + ++ ++ ++ +++ + MR
Sbjct: 139 TSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIW 198
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQV 202
+ F F+ VL A +D G +VH + VK G S FV L++MYAKC + ++ V
Sbjct: 199 PNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSV 258
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ +++VSW +++AG N+C E L LF+ R + Q T +++ CA L+ L
Sbjct: 259 FNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQL 318
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVG 321
+ LH +LK G + +++TAL D Y KCG + DA ++F S ++VSWTA+I G
Sbjct: 319 ALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISG 378
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Q+G A+ LF+ + PN T +++L AS + + +H+ I+ +
Sbjct: 379 CIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHI 434
Query: 382 -TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD---------------- 424
+V AL+ Y+K DA IF+ +KDV+AW++++S
Sbjct: 435 PSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAI 494
Query: 425 -NVSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P+ T+ SVI ACA A V G HA S K + + V +AL++ Y++ G+
Sbjct: 495 QGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDA-ICVSSALVSMYSRKGNI 553
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
SA++VF+ +++ V+W++MI GY G ++ F M +Q + V F ++ C
Sbjct: 554 DSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGC 613
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H G+V EG + F SM RD K P+M+HY CMVDL +RAG+L+E + + +MP +
Sbjct: 614 THNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMV 673
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ L C ++ +LG+ K+L L P + YVL+SN+YA+ G+W ++VR+LM
Sbjct: 674 WRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDY 733
Query: 663 RGLSKSPGCSLVDL 676
R + K GCS + +
Sbjct: 734 RKVKKEAGCSWIQI 747
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 152/514 (29%), Positives = 253/514 (49%), Gaps = 33/514 (6%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRW-YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
AR D +P D + + Y + ++++ + R+ D+ S VLKAC
Sbjct: 51 ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110
Query: 158 ELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWT 215
+ D G ++HC VK G V G LVDMY KC + +VF+ KNVV+WT
Sbjct: 111 SVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWT 170
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
S++ G E + LF RMR + N T S+++A A AL G+ +H +K
Sbjct: 171 SLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKF 230
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G + + +L++MY KCG + DA+SVF+ + + D+VSW ++ G + +AL+LF
Sbjct: 231 GCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQLF 290
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
+ + T A+V+ A L L + R +HS ++ G V+ AL D Y+KC
Sbjct: 291 HESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKC 350
Query: 395 HVIADARYIFE-TTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
+ADA IF TT ++V++W +IISG +D V P+ T ++
Sbjct: 351 GELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAM 410
Query: 437 ISACASLGAVQVGSSLHAYSTK---QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+ A S+ Q+ HA K Q + S VGTALL Y+K G + A +F +
Sbjct: 411 LKASLSILPPQI----HAQVIKTNYQHIPS----VGTALLASYSKFGSTEDALSIFKMIE 462
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+K+ V WSAM+ + GD G+ LF+ M + ++PNE ++++ AC+ + +
Sbjct: 463 QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGR 522
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
F+++ +++ ++ +V + +R G ++ A
Sbjct: 523 QFHAISIKYRYHDAICVSSALVSMYSRKGNIDSA 556
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 12/220 (5%)
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D+ TL V+ AC S+ +G LH K G V GT+L++ Y KCG V
Sbjct: 98 DSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEV 157
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+ M +KN VTW++++ G +ALF M E + PN F ++LSA + G +
Sbjct: 158 FEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGAL 217
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
G + + KF +VC ++++ A+ G +E+A M VS +
Sbjct: 218 DLGQRVH---AQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVS-WNTL 273
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
+ G L E ++ + H +A + + YA+
Sbjct: 274 MAG------LQLNECELEALQLFHESRATMGKMTQSTYAT 307
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 8/152 (5%)
Query: 59 CKSTG--SLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
C S G + FHA+ I + C ++ LVSMY G++ A+ VF+ + D S+
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWN 572
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
MI Y + +E ++ M + D F V+ C + EG + +V+
Sbjct: 573 SMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVR- 631
Query: 176 GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ ++ YA D+ S DET+
Sbjct: 632 ----DHKINPTMEHYACMVDLYSRAGKLDETM 659
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 200/630 (31%), Positives = 326/630 (51%), Gaps = 25/630 (3%)
Query: 69 HALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA +GL N + LV+MY + A+ VF+S+ + + M+ + N L
Sbjct: 332 HAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLA 391
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++++EF+ CM++ + D F F+ + AC L ++ G ++H ++K + FV L
Sbjct: 392 QEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANAL 451
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VDMYAK + +R+ F+ + VSW ++I GYVQ + E +F RM V ++
Sbjct: 452 VDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDE 511
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++L S+V+ACA ++ L +G+ H ++K+G++ ++ ++L+DMYVKCG + AR VF
Sbjct: 512 VSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYS 571
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ S ++VS A+I GYT G+ ++A+ LF + + P VT A +L LN+G
Sbjct: 572 MPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLG 630
Query: 367 RMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGL- 422
R +H ++ G V +L+ +Y D+ +F E K ++ W ++ISG
Sbjct: 631 RQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGYA 690
Query: 423 ----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
DN+ PD SV+ ACA + ++Q G +H+ G V
Sbjct: 691 QQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFHTGFNMDEV 750
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
++L++ YAKCGD + + VF M R N ++W++MI G G +L +F M
Sbjct: 751 TC-SSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKNGYAEEALEIFKQMEQ 809
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
+ + P+EV F +LSACSH G V EG K F M ++K P + H CMVD+L R G L
Sbjct: 810 QSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHLGCMVDILGRWGFLN 869
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
EA EF+ + + D L+ L C + G+ K++EL P + YVL+S++YA
Sbjct: 870 EAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELKPQSSSSYVLLSSIYA 929
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
W +R MK +G+ K PG S ++
Sbjct: 930 ESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 173/586 (29%), Positives = 283/586 (48%), Gaps = 87/586 (14%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V +Y G+V +A+ F + D +++ ++ Y + L+ +V+ + CM +
Sbjct: 82 IVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPN 141
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F F+ VL AC L+D++ G +VHC + K G G SF GL+DMYAKCR + +R VFD
Sbjct: 142 EFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFD 201
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
L+ + VSWT++IAGYV++ E + +F+RM+ +QITL ++V A
Sbjct: 202 GALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA--------- 252
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
YV G + DAR +F ++ + ++V+W MI G+ +
Sbjct: 253 --------------------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAK 286
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
G+ ++A+ F + K ++ SVLSA A L LN G MVH+ + GL+D +
Sbjct: 287 RGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYV 346
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+ALV+MYAKC + A+ +F + E++++ WN+++ G N
Sbjct: 347 GSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGP 406
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T S+ SACASL + G LH K +SN++V AL++ YAK G + AR
Sbjct: 407 QPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNK-FASNLFVANALVDMYAKSGALKEAR 465
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F+ M+ + V+W+A+I GY + + +F M++ V P+EV +I+SAC++
Sbjct: 466 KQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQ 525
Query: 547 MVGEGWKC---------------------FYSMC------RDFKFVPSMKHYVCMVDLLA 579
+ G +C Y C RD + ++ V + L+A
Sbjct: 526 ELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIA 585
Query: 580 --RAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGE 620
G LEEA+ + + ++P F L GC +LG
Sbjct: 586 GYTMGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGR 631
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 183/640 (28%), Positives = 305/640 (47%), Gaps = 60/640 (9%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V+ Y + G + AR +F +PNP+ ++ VMI + ++ + F+ ++K +
Sbjct: 249 VVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKAT 308
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFD 204
VL A L ++ G VH + K G D+ +V + LV+MYAKC + +++QVF+
Sbjct: 309 RSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFN 368
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++N+V W +M+ G+ QN AQE + F+ M+ + ++ T S+ +ACA L L+
Sbjct: 369 SLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNF 428
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G LH ++K N + AL+DMY K G +++AR F+ + D VSW A+IVGY Q
Sbjct: 429 GGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQ 488
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
Y D+A +F P+ V++AS++SA A + L G+ H L +++GL+ T
Sbjct: 489 EEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCA 548
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----LDDNV-----------S 427
++L+DMY KC V+ AR +F + ++V++ N++I+G L++ +
Sbjct: 549 GSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLK 608
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P VT ++ C + +G +H K G LSS+ V +LL Y +
Sbjct: 609 PTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSET 668
Query: 488 VFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS--- 543
+F ++ K V W+A+I GY Q +L + M ++ + P++ F ++L AC+
Sbjct: 669 LFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMS 728
Query: 544 -------------HTGMVGEGWKC-----FYSMCRD-------FKFVPSMKHYV---CMV 575
HTG + C Y+ C D F+ +P + + M+
Sbjct: 729 SLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788
Query: 576 DLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML---EL 629
LA+ G EEALE ME I PD F L C R G + M+ +L
Sbjct: 789 VGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKL 848
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
P +V L GRW +N+ E + + G P
Sbjct: 849 QPRVDHLGCMVDIL----GRWGFLNEAEEFINKLGCKADP 884
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 268/540 (49%), Gaps = 60/540 (11%)
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
L+ + +H + +K+G G + +VD+Y KC ++ +++ F K+V +W S+
Sbjct: 54 LQALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSV 113
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
++ Y+ + + F M V N+ T +++AC+ L+ ++ G+ +H + K G
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGF 173
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
S L+DMY KC +RDAR VFD ++D VSWTA+I GY + G+P +A+K+F
Sbjct: 174 GFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDR 233
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVI 397
+ P+ +T+ +V++A LG L
Sbjct: 234 MQRVGHAPDQITLVTVVNAYVALGRL---------------------------------- 259
Query: 398 ADARYIFETTSEKDVIAWNSIISG-LDDNVSPDAV----------------TLVSVISAC 440
ADAR +F +V+AWN +ISG + +A+ +L SV+SA
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
ASL + GS +HA +TK+G L NVYVG+AL+N YAKC +A+ VF+++ E+N V W
Sbjct: 320 ASLSMLNYGSMVHAQATKEG-LDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLW 378
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
+AM+GG+ G + FS M QP+E FT+I SAC+ + G + M +
Sbjct: 379 NAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIK 438
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ KF ++ +VD+ A++G L+EA + E M I +VS + A + G D
Sbjct: 439 N-KFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVS-WNAIIVGYVQEEYNDEAF 496
Query: 621 VMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS--PGCSLVDL 676
M ++M+ + PD+ +VS A+ R Q L+ + GL S G SL+D+
Sbjct: 497 FMFRRMVSNGVLPDEVSLASIVSAC-ANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDM 555
Score = 225 bits (573), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 162/593 (27%), Positives = 274/593 (46%), Gaps = 91/593 (15%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
C L+ MY +++ AR VFD N D S+ +I Y
Sbjct: 179 CQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYV------------------- 219
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
D F E +KV + +VG PD L +V+ Y + +R
Sbjct: 220 --RDGFPM--------------EAVKVFDRMQRVGHAPDQITLVTVVNAYVALGRLADAR 263
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++F + + NVV+W MI+G+ + A+E + F +++ ++ + +LGS+++A A L
Sbjct: 264 KLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLS 323
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L+ G +H K G++ N ++ +AL++MY KC + A+ VF+ L ++V W AM+
Sbjct: 324 MLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLG 383
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-E 379
G+ Q+G + ++ F+ K P+ T S+ SA A L LN G +H++ I+
Sbjct: 384 GFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFAS 443
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
+ V NALVDMYAK + +AR FE D ++WN+II G +
Sbjct: 444 NLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ V PD V+L S++SACA++ ++ G H K GL +S G++L++ Y KCG
Sbjct: 504 SNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTC-AGSSLIDMYVKCGVV 562
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+AR VF +M +N V+ +A+I GY M G ++ LF ++ ++P EV F +L C
Sbjct: 563 LAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGC 621
Query: 543 SHTGMVGEGWK----------------------CFY----------SMCRDFKFVPSMKH 570
M+ G + C Y ++ + ++ +
Sbjct: 622 DGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVV 681
Query: 571 YVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGE 620
+ ++ A+ E+AL+F ++M I PD + F + L C S G+
Sbjct: 682 WTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQ 734
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/517 (34%), Positives = 298/517 (57%), Gaps = 23/517 (4%)
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
+F L+ L + + +D+G + +FD + W +++ + + Q LV ++R+R
Sbjct: 40 TFFLSDL--LRSATKDLGYTLLLFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRN 97
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
V ++ T L+ A +KLR + ++ + +I+K G++ ++ + +L+ + CG +
Sbjct: 98 HGVIPDRHTFPLLLKAFSKLRNENPFQF-YAHIVKFGLDFDAFVQNSLVSAFAHCGYVDC 156
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
+R +F E D+VSWTA+I G ++G +AL+ F + + + + VT+ SVL A+A
Sbjct: 157 SRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLCAAAM 216
Query: 360 LGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
L ++ GR VH + G + D V +ALVDMY+KC DA +F +++++W +
Sbjct: 217 LRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGA 276
Query: 418 IISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+I+G + + + P+ T+ S ++ACA LG++ G LH Y +
Sbjct: 277 LIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSK 336
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
L N +GTAL++ Y+KCG A +VF+ + K+ W+AMI G M+GD SL LF
Sbjct: 337 L-GLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLF 395
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
S M+ VQPN V F +LSAC+H G+V EG + F M D++ P++ HY CMVDLL R
Sbjct: 396 SQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGR 455
Query: 581 AGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
AGRLEEA++F+E+MP+EP ++GA GC ++ F+LGE + +++L P + Y+L+
Sbjct: 456 AGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILL 515
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+NLY+ +W VR LMK +G+ KSP CS ++++
Sbjct: 516 ANLYSRCQKWEAAANVRRLMKGKGVDKSPACSWIEVN 552
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 210/438 (47%), Gaps = 34/438 (7%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
F+A ++ GL D LVS + G+V +R +F D S+ +I N
Sbjct: 125 FYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGR 184
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP--DSFVLT 184
+ +E + MR E D VL A LRD+ G VH V+ G D +V +
Sbjct: 185 AVEALECFVEMRSSGVEVDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGS 244
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LVDMY+KC + +VF+E +N+VSW ++IAGYVQ + +E L +F M +E
Sbjct: 245 ALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEP 304
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
NQ T+ S +TACA+L +L QG+WLH Y+ + + +NS L TAL+DMY KCG + +A VF
Sbjct: 305 NQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVF 364
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
++L + D+ WTAMI G G +L LF+ + PN VT VLSA A G ++
Sbjct: 365 EKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVD 424
Query: 365 MGRMVHSLGIRLGLEDYTV------INALVDMYAKCHVIADA-RYIFETTSEKDVIAWNS 417
G + RL + DY + +VD+ + + +A ++I E W +
Sbjct: 425 EGLEL----FRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGA 480
Query: 418 IISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
+ SG C A ++G + + K S Y+ L N Y+
Sbjct: 481 LFSG------------------CMIHKAFELGEHIGNHLIKLQPHHSGRYI--LLANLYS 520
Query: 478 KCGDAQSARMVFDAMREK 495
+C ++A V M+ K
Sbjct: 521 RCQKWEAAANVRRLMKGK 538
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 292/521 (56%), Gaps = 21/521 (4%)
Query: 176 GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
G + FV T L++MY K + +++VFD L +N VSW +M++GY C++E LF
Sbjct: 154 GSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFR 213
Query: 236 RM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
M ++ +E N+ ++++A + L G LHG +LK G+ + +L+ MY K
Sbjct: 214 LMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKA 273
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+ A VF + ++W+AMI GY Q+G + A ++F + F P T VL
Sbjct: 274 ECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVL 333
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSE-KDV 412
+A + +G L +G+ H L ++LG E V +ALVDMYAKC I DA+ F + DV
Sbjct: 334 NACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDV 393
Query: 413 IAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+ W ++I+G N + P +T+ SV+ ACA L A+ +G LHA
Sbjct: 394 VLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQ 453
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K S VGTAL Y+KCG+ + + +VF M +++ ++W+++I + G G
Sbjct: 454 ILK-CRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSD 512
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
+L +F +M E P+ + F +LSACSH G+V GW F +M +D+ +P++ HY CMV
Sbjct: 513 ALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMV 572
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
D+L+RAG+L+EA +F++++ I+ L+ L C FD+G ++++EL + +
Sbjct: 573 DILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSS 632
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+L+SN+YA+ +W V +VR LM+ RG+SK GCS V+L
Sbjct: 633 AYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWVEL 673
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 234/455 (51%), Gaps = 26/455 (5%)
Query: 76 GLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK 135
G N +T L++MY G V A+ VFD M + + S+ M+ Y ++ E ++
Sbjct: 154 GSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFR 213
Query: 136 CMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAK 192
M ++ E + FV + VL A + G ++H ++K G G S V LV MYAK
Sbjct: 214 LMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVS-VENSLVTMYAK 272
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
+ ++ +VF + ++N ++W++MI GY QN A +F +M + T +
Sbjct: 273 AECMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGV 332
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-D 311
+ AC+ + AL GK H ++K+G E ++ +AL+DMY KCG I DA+ F +L + D
Sbjct: 333 LNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDD 392
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+V WTAMI G+ Q+G ++AL L++ P+++T+ SVL A A L L++G+ +H+
Sbjct: 393 VVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHA 452
Query: 372 --LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS--------- 420
L R L +V AL MY+KC + D+ +F ++DVI+WNSIIS
Sbjct: 453 QILKCRFSLGG-SVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGS 511
Query: 421 -GLD-------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
LD + +PD +T ++++SAC+ +G V G TK L + +
Sbjct: 512 DALDMFEEMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACM 571
Query: 473 LNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
++ ++ G + A+ D++ + T W ++G
Sbjct: 572 VDILSRAGQLKEAKDFIDSITIDHGTCLWRIVLGA 606
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 366 GRMVHSLGIRLGLEDYT-VINALVDMYAKCH--VIADARYIFE--TTSEKDVIAWNSIIS 420
G +H ++ G + V N+L+ Y ++ A +F + +DV +WNS+++
Sbjct: 33 GEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLN 92
Query: 421 GLDDN-------------VSPDAV-----TLVSVISACASLGAVQVGSSLHAYSTK--QG 460
L + SP+AV + + +A A + + G+ HA + K
Sbjct: 93 PLSRHHPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSS 152
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
S+NV+V TALLN Y K G A+ VFD M +N V+W+AM+ GY + LF
Sbjct: 153 CGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELF 212
Query: 521 SDMLNE-EVQPNEVIFTTILSACS 543
ML + ++ NE + T +LSA S
Sbjct: 213 RLMLQKCPLEKNEFVTTAVLSAVS 236
>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
Length = 657
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 186/514 (36%), Positives = 286/514 (55%), Gaps = 30/514 (5%)
Query: 160 RDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
RD +H V G D+FV + L +Y K + +R+VFD + + W +++
Sbjct: 128 RDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLL 187
Query: 219 AGYVQNDCAQEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
AG + A E V RM E G V + TL S + A A+ + G+ +HGY +K G+
Sbjct: 188 AG-LPGSVALEAFV---RMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGL 243
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
+ H+VT L+ +Y KCG++ ARS+FD + DLV++ A+I GY+ +G + +++LF +
Sbjct: 244 AEHEHVVTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKE 303
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHV 396
+D+ PN T+ +V+ + G+ + R +H+ ++ L+ D V AL +Y + +
Sbjct: 304 LAASDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLND 363
Query: 397 IADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISA 439
+ AR IF+ EK + +WN++ISG N V P+ T+ S +SA
Sbjct: 364 MESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSA 423
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
CA LGA+ +G+ +H K+ L NVYV TAL++ YAKCG AR +FD M KN V+
Sbjct: 424 CAQLGALSLGTWVHRIIAKENL-ELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVS 482
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+AMI GYG+ G G +L L+ ML+ + P F ++L ACSH G+V EG K F M
Sbjct: 483 WNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMT 542
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRF 616
+++ P ++H CMVDLL RAG+L EAL+ + P I P V +GA L C ++
Sbjct: 543 NEYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGV--WGALLSACMVHKNS 600
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
DL ++ +K+ EL + A YYVL+SNLY S +
Sbjct: 601 DLAKLASQKLFELDSENAGYYVLLSNLYTSKKHY 634
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 220/446 (49%), Gaps = 23/446 (5%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
+ + + H L + G D + L +Y V AR VFD++P+PD + ++
Sbjct: 128 RDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLL 187
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
+ + V + R R D+ + L+A E + G VH VK G
Sbjct: 188 AGLPGSVALEAFVRMVEVGRVR---PDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLA 244
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
V+TGL+ +Y+KC D+ +R +FD D ++V++ ++I+GY N + + LF +
Sbjct: 245 EHEHVVTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKEL 304
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
N TL +++ + + LH +++K ++ ++ + TAL +Y + ++
Sbjct: 305 AASDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDM 364
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
ARS+FD + + SW AMI GY Q+G + A++LF + + PN TI+S LSA
Sbjct: 365 ESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSAC 424
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
AQLG L++G VH + + LE + V+ AL+DMYAKC IA+AR IF+ K+V++WN
Sbjct: 425 AQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWN 484
Query: 417 SIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++ISG LD + P + T +SV+ AC+ G V G + T +
Sbjct: 485 AMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNE 544
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSA 485
+S + T +++ + G A
Sbjct: 545 YRISPGIEHCTCMVDLLGRAGKLNEA 570
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 13/263 (4%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HA ++ L D +T L ++Y ++ ARS+FD+MP S+ MI Y N
Sbjct: 333 RCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMISGYAQN 392
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVL 183
L + VE ++ M++ + + S L AC +L + G VH I K + +V+
Sbjct: 393 GLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVYVM 452
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L+DMYAKC I +R +FD +KNVVSW +MI+GY + E L L+ M + +
Sbjct: 453 TALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSMLDACIL 512
Query: 244 GNQITLGSLVTACAKLRALHQGKWL-----HGYILKIGIEINSHLVTALLDMYVKCGNIR 298
T S++ AC+ + +G+ + + Y + GIE H T ++D+ + G +
Sbjct: 513 PTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISPGIE---H-CTCMVDLLGRAGKLN 568
Query: 299 DARSVFDEL--CSIDLVSWTAMI 319
+A + E +I W A++
Sbjct: 569 EALDLISEFPQSAIGPGVWGALL 591
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 306/557 (54%), Gaps = 42/557 (7%)
Query: 146 NFVFSKVLKACC---ELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
+F+F +LK C +LR I M +H V P+ F++ V++ D S +
Sbjct: 39 DFLF--LLKKCISVNQLRQIQAQMLLHS----VEKPN-FLIPKAVEL----GDFNYSSFL 87
Query: 203 FDETLDKNVVSWTSMIAGYVQ--NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
F T + N S+ MI G ND + L L+ RM+ ++ ++ T + ACAKL
Sbjct: 88 FSVTEEPNHYSFNYMIRGLTNTWND-HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ G+ +H + K+G+E + H+ +L+ MY KCG + AR +FDE+ D VSW +MI
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI--RLGL 378
GY+++GY A+ LF + F P+ T+ S+L A + LG+L GR++ + I ++GL
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
+ + + L+ MY KC + AR +F +KD +AW ++I+ N
Sbjct: 267 STF-LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
VSPDA TL +V+SAC S+GA+++G + ++++ L N+YV T L++ Y KCG
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL-QHNIYVATGLVDMYGKCGR 384
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ A VF+AM KN TW+AMI Y QG +L LF M V P+++ F +LSA
Sbjct: 385 VEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSA 441
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C H G+V +G + F+ M F VP ++HY ++DLL+RAG L+EA EFME P +PD
Sbjct: 442 CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 501
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELM 660
+ A L C + E ++ ++E+ K A YV+ SN+ A W ++R LM
Sbjct: 502 MLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALM 561
Query: 661 KQRGLSKSPGCSLVDLD 677
+ RG+ K+PGCS ++++
Sbjct: 562 RDRGVVKTPGCSWIEIE 578
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 221/430 (51%), Gaps = 25/430 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
L LL C S L+ A +++ + +K N L+ G Y+ +F P+ Y
Sbjct: 41 LFLLKKCISVNQLRQIQAQMLLHSV--EKPNF-LIPKAVELGDFNYSSFLFSVTEEPNHY 97
Query: 113 SFQVMIRWYFLNDLYKD---IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
SF MIR L + + D + Y+ M+ + D F ++ V AC +L +I G VH
Sbjct: 98 SFNYMIRG--LTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ KVG D + L+ MYAKC +G +R++FDE +++ VSW SMI+GY + A+
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ + LF +M E E ++ TL S++ AC+ L L G+ L + I +++ L + L+
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
MY KCG++ AR VF+++ D V+WTAMI Y+Q+G +A KLF + + P+
Sbjct: 276 SMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAG 335
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
T+++VLSA +G L +G+ + + L L+ + V LVDMY KC + +A +FE
Sbjct: 336 TLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 395
Query: 408 SEKDVIAWNSIISGLDD--------------NVSPDAVTLVSVISACASLGAVQVGSS-L 452
K+ WN++I+ +V P +T + V+SAC G V G
Sbjct: 396 PVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYF 455
Query: 453 HAYSTKQGLL 462
H S+ GL+
Sbjct: 456 HEMSSMFGLV 465
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 306/557 (54%), Gaps = 42/557 (7%)
Query: 146 NFVFSKVLKACC---ELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
+F+F +LK C +LR I M +H V P+ F++ V++ D S +
Sbjct: 35 DFLF--LLKKCISVNQLRQIQAQMLLHS----VEKPN-FLIPKAVEL----GDFNYSSFL 83
Query: 203 FDETLDKNVVSWTSMIAGYVQ--NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
F T + N S+ MI G ND + L L+ RM+ ++ ++ T + ACAKL
Sbjct: 84 FSVTEEPNHYSFNYMIRGLTNTWND-HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 142
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ G+ +H + K+G+E + H+ +L+ MY KCG + AR +FDE+ D VSW +MI
Sbjct: 143 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 202
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI--RLGL 378
GY+++GY A+ LF + F P+ T+ S+L A + LG+L GR++ + I ++GL
Sbjct: 203 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 262
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
+ + + L+ MY KC + AR +F +KD +AW ++I+ N
Sbjct: 263 STF-LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 321
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
VSPDA TL +V+SAC S+GA+++G + ++++ L N+YV T L++ Y KCG
Sbjct: 322 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL-QHNIYVATGLVDMYGKCGR 380
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ A VF+AM KN TW+AMI Y QG +L LF M V P+++ F +LSA
Sbjct: 381 VEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSA 437
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C H G+V +G + F+ M F VP ++HY ++DLL+RAG L+EA EFME P +PD
Sbjct: 438 CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 497
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELM 660
+ A L C + E ++ ++E+ K A YV+ SN+ A W ++R LM
Sbjct: 498 MLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALM 557
Query: 661 KQRGLSKSPGCSLVDLD 677
+ RG+ K+PGCS ++++
Sbjct: 558 RDRGVVKTPGCSWIEIE 574
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 221/430 (51%), Gaps = 25/430 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
L LL C S L+ A +++ + +K N L+ G Y+ +F P+ Y
Sbjct: 37 LFLLKKCISVNQLRQIQAQMLLHSV--EKPNF-LIPKAVELGDFNYSSFLFSVTEEPNHY 93
Query: 113 SFQVMIRWYFLNDLYKD---IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
SF MIR L + + D + Y+ M+ + D F ++ V AC +L +I G VH
Sbjct: 94 SFNYMIRG--LTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 151
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ KVG D + L+ MYAKC +G +R++FDE +++ VSW SMI+GY + A+
Sbjct: 152 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 211
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ + LF +M E E ++ TL S++ AC+ L L G+ L + I +++ L + L+
Sbjct: 212 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 271
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
MY KCG++ AR VF+++ D V+WTAMI Y+Q+G +A KLF + + P+
Sbjct: 272 SMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAG 331
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
T+++VLSA +G L +G+ + + L L+ + V LVDMY KC + +A +FE
Sbjct: 332 TLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 391
Query: 408 SEKDVIAWNSIISGLDD--------------NVSPDAVTLVSVISACASLGAVQVGSS-L 452
K+ WN++I+ +V P +T + V+SAC G V G
Sbjct: 392 PVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYF 451
Query: 453 HAYSTKQGLL 462
H S+ GL+
Sbjct: 452 HEMSSMFGLV 461
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 302/543 (55%), Gaps = 25/543 (4%)
Query: 158 ELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDET--LDKNVVSW 214
+ + ++ +VH +++ G D VL + L + Y + + + F+ +N SW
Sbjct: 16 QAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSW 75
Query: 215 TSMIAGYVQND--CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
++++GY ++ C + L+L+NRMR + L + AC L L G +HG
Sbjct: 76 NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLA 135
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
+K G++ + ++ +L++MY + G + A+ VFDE+ + V W ++ GY + +
Sbjct: 136 MKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVF 195
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT--VINALVDM 390
+LF + + +T+ ++ A + +G+ VH + IR D + + +++DM
Sbjct: 196 RLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDM 255
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTL 433
Y KC ++ +AR +FET+ +++V+ W ++ISG L +++ P+ TL
Sbjct: 256 YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTL 315
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+++ +C+SLG+++ G S+H Y + G+ V T+ ++ YA+CG+ Q AR VFD M
Sbjct: 316 AAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF-TSFIDMYARCGNIQMARTVFDMMP 374
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
E+N ++WS+MI +G+ G +L F M ++ V PN V F ++LSACSH+G V EGWK
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWK 434
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F SM RD+ VP +HY CMVDLL RAG + EA F++NMP++P S +GA L C ++
Sbjct: 435 QFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
DL + +K+L + P+K+ YVL+SN+YA G W VN VR M +G K G S
Sbjct: 495 KEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSA 554
Query: 674 VDL 676
++
Sbjct: 555 TEV 557
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 238/479 (49%), Gaps = 28/479 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMP--NP 109
L +L K+ + HA +I+ G ++ + L + Y + +A S F+ +P
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 110 DFYSFQVMIRWYFLNDL--YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ +S+ ++ Y + Y D++ Y MR+ D+F +KAC L ++ G+
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H +K G D +V LV+MYA+ + S+++VFDE +N V W ++ GY++
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY-ILKIGIEINSHLVT 285
E LF MR+ + + +TL LV AC + A GK +HG I + I+ + +L
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+++DMYVKC + +AR +F+ ++V WT +I G+ + +A LF P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
N T+A++L + + LG+L G+ VH IR G+E D + +DMYA+C I AR +F
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 405 ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQ 447
+ E++VI+W+S+I+ NV P++VT VS++SAC+ G V+
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 448 VG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMI 504
G + + G++ + +++ + G+ A+ D M K + W A++
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYA-CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 192/363 (52%), Gaps = 12/363 (3%)
Query: 68 FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H L + +GL +D LV MY G ++ A+ VFD +P + + V+++ Y
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLT 184
++ + MR D ++KAC + G VH ++ D ++
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
++DMY KCR + ++R++F+ ++D+NVV WT++I+G+ + + A E LF +M +
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
NQ TL +++ +C+ L +L GK +HGY+++ GIE+++ T+ +DMY +CGNI+ AR+VF
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + +++SW++MI + +G ++AL F K + PN VT S+LSA + GN+
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 365 MG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVI-AWNSI 418
G M G+ E Y +VD+ + I +A+ + K + AW ++
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYA---CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 419 ISG 421
+S
Sbjct: 488 LSA 490
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 187/390 (47%), Gaps = 26/390 (6%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-C- 308
+L+T ++ + L+ + +H ++ G E L ++L + Y++ + A S F+ + C
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 309 SIDLVSWTAMIVGYTQSG---YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ SW ++ GY++S Y D L ++ D + + + A LG L
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGV-DSFNLVFAIKACVGLGLLEN 127
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
G ++H L ++ GL+ D V +LV+MYA+ + A+ +F+ ++ + W ++ G
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
D ++ DA+TL+ ++ AC ++ A +VG +H S ++ + + Y
Sbjct: 188 YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
+ ++++ Y KC +AR +F+ ++N V W+ +I G+ + LF ML E
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ PN+ IL +CS G + G M R+ + ++ ++ +D+ AR G ++ A
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV-NFTSFIDMYARCGNIQMA 366
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
+ MP E +V + + ++ G+ F+
Sbjct: 367 RTVFDMMP-ERNVISWSSMINAFGINGLFE 395
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 59 CKSTGSL---KAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C S GSL K+ H +I +G+ D N T + MY G+++ AR+VFD MP + S+
Sbjct: 322 CSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISW 381
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MI + +N L+++ ++ + M+ + ++ F +L AC ++ EG K + +
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 175 VGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS-WTSMIAG 220
G P+ +VD+ + +IG ++ D K + S W ++++
Sbjct: 442 DYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 191/610 (31%), Positives = 312/610 (51%), Gaps = 20/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S+Y + A VF M D +F +I + + + M+ D
Sbjct: 184 LISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPD 243
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
+ + +L AC + D+ +G ++H ++K G +++ G L+D+Y K DI + Q+FD
Sbjct: 244 SVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFD 303
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
NVV W M+ Y Q D + +F RM V N+ T ++ C +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGL 363
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +K G + + ++ L+DMY K G + A+ + D + D+VSWT+MI GY Q
Sbjct: 364 GEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQ 423
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+ +AL+ F + + +P+++ +AS +SA A + ++ G +H+ G D ++
Sbjct: 424 HEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSI 483
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
N LV +YA+C + +A FE K+ I WN +ISG +
Sbjct: 484 WNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGA 543
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ T VS ISA A+L ++ G +HA K G +S + AL++ Y KCG + A+
Sbjct: 544 KYNVFTFVSSISASANLADIKQGKQIHARVIKTGY-TSETEISNALISLYGKCGSIEDAK 602
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
M F M ++N V+W+ +I G G +L LF M + ++P++V F +L+ACSH G
Sbjct: 603 MDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVG 662
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG F SM + P HY C+VD+L RAG+L+ A F+E MPI D ++
Sbjct: 663 LVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTL 722
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ ++GE K +LEL P + YVL+SN YA G+W +Q+R++MK RG+
Sbjct: 723 LSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVR 782
Query: 667 KSPGCSLVDL 676
K PG S +++
Sbjct: 783 KEPGRSWIEV 792
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 158/562 (28%), Positives = 276/562 (49%), Gaps = 27/562 (4%)
Query: 56 LGLCKSTGS----LKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L C+ +G + HA I+ GL+ + L+ +Y G V+ AR VF+ + D
Sbjct: 48 LRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRD 107
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ ++ Y N L ++ V Y+ M + +V S +L AC + G +H
Sbjct: 108 NVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHV 167
Query: 171 EIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
++ K G ++FV L+ +Y +CR + +VF + L + V++ ++I+G+ Q
Sbjct: 168 QVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDR 227
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L +F+ M+ + + +T+ SL+ AC+ + L +GK LH Y+LK G+ ++ + +LLD
Sbjct: 228 ALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLD 287
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+YVK G+I +A +FD ++V W M+V Y Q K+ +F A PN T
Sbjct: 288 LYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFT 347
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+L G + +G +HSL I+ G + D V L+DMY+K + A+ I +
Sbjct: 348 YPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIE 407
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
EKDV++W S+I+G + + PD + L S ISACA + AV GS
Sbjct: 408 EKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQ 467
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+HA G S++V + L+ YA+CG ++ A F+A+ K +TW+ +I G+ G
Sbjct: 468 IHARVYVSG-YSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSG 526
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+L +F M + N F + +SA ++ + +G K ++ + +
Sbjct: 527 LYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQG-KQIHARVIKTGYTSETEIS 585
Query: 572 VCMVDLLARAGRLEEA-LEFME 592
++ L + G +E+A ++F E
Sbjct: 586 NALISLYGKCGSIEDAKMDFFE 607
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 245/481 (50%), Gaps = 26/481 (5%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+D+YAK + +R+VF+E ++ VSW ++++GY QN +E + L+ M V
Sbjct: 83 LIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPT 142
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
L S+++AC K G+ +H + K G + + AL+ +Y++C + R A VF
Sbjct: 143 PYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFC 202
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
++ D V++ +I G+ Q G+ D+AL +F + + + P+ VTIAS+L+A + +G+L
Sbjct: 203 DMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRK 262
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--- 421
G+ +HS ++ G+ DY + +L+D+Y K I +A IF++ +V+ WN ++
Sbjct: 263 GKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQ 322
Query: 422 LDD--------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+DD V P+ T ++ C G + +G +H+ + K G S++Y
Sbjct: 323 IDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNG-FQSDMY 381
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V L++ Y+K G A+ + D + EK+ V+W++MI GY +L F +M
Sbjct: 382 VSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACG 441
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ P+ + + +SAC+ V +G + ++ + + + +V L AR G +EA
Sbjct: 442 IWPDNIGLASAISACAGIKAVHQGSQ-IHARVYVSGYSADVSIWNGLVYLYARCGISKEA 500
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY--YVLVSNLYA 645
E + + ++ G + G +++ L E +K +++ A Y + VS++ A
Sbjct: 501 FSSFEAIEHKEGITWNG-LISG---FAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISA 556
Query: 646 S 646
S
Sbjct: 557 S 557
>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
lyrata]
Length = 1217
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 186/571 (32%), Positives = 310/571 (54%), Gaps = 30/571 (5%)
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
P+F FQ + L D +K + F+ +VL +L+ + V
Sbjct: 14 PEFRKFQTRKVTSSVPKLELD--------QKNSPKETAFMLGQVLDTYPDLKTL---RTV 62
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H I+ +S + L+ YA +D+ ++R+VFDE ++NV+ MI YV N
Sbjct: 63 HSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFY 122
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+EG+ +F M V+ + T ++ AC+ + GK +HG K+G+ + L
Sbjct: 123 REGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGL 182
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MY KCG + +AR V DE+ D+VSW +++ GY Q+ D AL++ + + +
Sbjct: 183 VSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDA 242
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETT 407
T+AS+L A + N+ V + ++G + N ++ +Y K + +A ++
Sbjct: 243 GTMASLLPAVSNTTTENV-MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELY--- 298
Query: 408 SEKDVIAWNSIISGLD-DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
SG++ D PDAV++ SV+ AC A+ +G +H Y ++ L+ N+
Sbjct: 299 ------------SGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP-NL 345
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ AL++ YAKCG AR VF+ M+ ++ V+W+AMI YG G G ++ALFS M +
Sbjct: 346 LLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDS 405
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
+ P+ + F T L+ACSH G++ EG CF M +K P ++H CMVDLL RAG+++E
Sbjct: 406 GLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKE 465
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
A +F++ MP+EP+ ++GA L C ++S D+G + K+ +L P+++ YYVL+SN+YA
Sbjct: 466 AYKFIQEMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 525
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
GRW V +R +MK +GL K+PG S V+++
Sbjct: 526 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVN 556
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 211/464 (45%), Gaps = 54/464 (11%)
Query: 64 SLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+L+ H+ +I + L N KL+ Y S V AR VFD +P + VMIR Y
Sbjct: 58 TLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYV 117
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
N Y++ ++ + M + D++ F VLKAC +I G K+H KVG + F
Sbjct: 118 NNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLF 177
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V GLV MY KC + +R V DE ++VVSW S++AGY QN + L + M
Sbjct: 178 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVK 237
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T+ SL+ A + + V + DM+ K G
Sbjct: 238 ISHDAGTMASLLPAVSN--------------------TTTENVMYVKDMFFKMGK----- 272
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
LVSW MI Y ++ P +A++L++ + F P+ V+I SVL A
Sbjct: 273 --------KSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTS 324
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L++G+ +H R L + + NAL+DMYAKC + AR +FE +DV++W ++IS
Sbjct: 325 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMIS 384
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
D + PD++ V+ ++AC+ G ++ G S T ++
Sbjct: 385 AYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 444
Query: 464 SNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGG 506
+ +++ + G + A + + + E N W A++G
Sbjct: 445 PRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGA 488
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 17/258 (6%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
L +C+ S+K H + L NT + +V Y + +F M S+
Sbjct: 227 LEVCREMESVKISHDAGTMASLLPAVSNT-------TTENVMYVKDMFFKMGKKSLVSWN 279
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
VMI Y N + + VE Y M E D + VL AC + + G K+H I +
Sbjct: 280 VMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 339
Query: 176 G-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
P+ + L+DMYAKC + +R VF+ ++VVSWT+MI+ Y + + + LF
Sbjct: 340 KLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 399
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGK-----WLHGYILKIGIEINSHLVTALLD 289
++M++ + + I + + AC+ L +G+ Y + +E HL ++D
Sbjct: 400 SKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLE---HLA-CMVD 455
Query: 290 MYVKCGNIRDARSVFDEL 307
+ + G +++A E+
Sbjct: 456 LLGRAGKVKEAYKFIQEM 473
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 322/622 (51%), Gaps = 45/622 (7%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N L++MYG NP S+ +I + N D + + M
Sbjct: 85 NTVLGNHLITMYGR---------------NP--VSWASVIAAHVQNGRAGDALGLFSSML 127
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+ D F ++AC EL D+ G +VH +K G D V LV MY+K +
Sbjct: 128 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 187
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG----NQITLGSLV 253
+F+ DK+++SW S+IAG+ Q E L +F RE VEG N+ GS
Sbjct: 188 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVF---REMIVEGSHHPNEFHFGSAF 244
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
AC + + G+ +HG +K ++ + ++ +L DMY +C N+ AR F + + DLV
Sbjct: 245 RACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLV 304
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
SW +++ Y+ G +AL LF++ + + P+ +T+ +L A L GR++HS
Sbjct: 305 SWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYL 364
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP---- 428
++LGL+ D +V N+L+ MYA+C ++ A +F ++DV+ WNSI++ + P
Sbjct: 365 VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVL 424
Query: 429 -------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
D ++L +V+SA A LG ++ +HAY+ K GL+ + T L++
Sbjct: 425 KLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNT-LIDT 483
Query: 476 YAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
YAKCG A +F+ M ++ +WS++I GY G + LFS M + ++PN V
Sbjct: 484 YAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVT 543
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
F +L+ACS G V EG + M ++ VP+ +H C+VDLLARAG+L EA F++ M
Sbjct: 544 FIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQM 603
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
P EPD+ ++ L +++ ++G+ + +L + P + YVL+ N+YA+ G W
Sbjct: 604 PFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFA 663
Query: 655 QVRELMKQRGLSKSPGCSLVDL 676
++++ M+ G+ KSPG S V L
Sbjct: 664 RLKKAMRTSGVKKSPGKSWVKL 685
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 232/498 (46%), Gaps = 55/498 (11%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIV--KVGGPDSFVLTG-------LVDMYAKCRDIGSS 199
++ ++ AC LR + +G +VH +V PD+ L G L+ MY +
Sbjct: 47 YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDA-QLAGNTVLGNHLITMYGR------- 98
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
N VSW S+IA +VQN A + L LF+ M +Q LGS V AC +L
Sbjct: 99 ----------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTEL 148
Query: 260 RALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
+ G+ +H + LK E S L+ AL+ MY K G + D +F+ + DL+SW +
Sbjct: 149 GDVGTGRQVHAHALK--SERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGS 206
Query: 318 MIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+I G+ Q G+ +AL++F + PN S A +G+ G +H L I+
Sbjct: 207 IIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY 266
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GL-------- 422
L+ D V +L DMYA+C + AR F D+++WNSI++ GL
Sbjct: 267 RLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLF 326
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
D + PD +T+ ++ AC A+ G +H+Y K G L +V V +LL+ YA+
Sbjct: 327 SEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLG-LDGDVSVCNSLLSMYAR 385
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
C D SA VF +++++ VTW++++ L LFS + E + + +
Sbjct: 386 CSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNV 445
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
LSA + G E K ++ V ++D A+ G L++A+ E M
Sbjct: 446 LSASAELGYF-EMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNR 504
Query: 599 DVSLFGAFLHGCGLYSRF 616
DV + + + G Y++F
Sbjct: 505 DVFSWSSLIVG---YAQF 519
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 186/375 (49%), Gaps = 15/375 (4%)
Query: 59 CKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C + GS + H L I L D L MY ++ AR F + PD S+
Sbjct: 247 CGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSW 306
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
++ Y + L + + + MR D +L AC + G +H +VK
Sbjct: 307 NSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK 366
Query: 175 VG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
+G D V L+ MYA+C D+ S+ VF E D++VV+W S++ Q++ +E L L
Sbjct: 367 LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKL 426
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
F+ + + ++I+L ++++A A+L K +H Y K G+ + L L+D Y K
Sbjct: 427 FSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAK 486
Query: 294 CGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
CG++ DA +F+ + + D+ SW+++IVGY Q GY +A LF+ + PNHVT
Sbjct: 487 CGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIG 546
Query: 353 VLSASAQLGNLNMGRMVHSL-----GIRLGLEDYTVINALVDMYAKCHVIAD-ARYIFET 406
VL+A +++G +N G +S+ GI E + I VD+ A+ + + A +I +
Sbjct: 547 VLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCI---VDLLARAGKLTEAANFIDQM 603
Query: 407 TSEKDVIAWNSIISG 421
E D+I W ++++
Sbjct: 604 PFEPDIIMWKTLLAA 618
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 201/651 (30%), Positives = 310/651 (47%), Gaps = 64/651 (9%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L+ G + G + H + + GL N L+ MY G V A +F M P+
Sbjct: 148 LSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNE 207
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL--------RDID 163
SF M+ D + + M + D S VL AC + R
Sbjct: 208 VSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFR 267
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G +H +V+ G G D V L+DMY KC ++ + +VF+ +VSW +I G+
Sbjct: 268 LGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFG 327
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
Q + + + + M+E E N++T +L+ +C K R
Sbjct: 328 QEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLASCIKAR---------------------- 365
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
++ AR++FD++ + +W ++ GY Q ++LF + +
Sbjct: 366 -------------DVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQN 412
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
P+ T+A +LS+ ++LG L+ GR VHS +R L D V + LVDMY+KC I AR
Sbjct: 413 VQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 472
Query: 402 YIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLG 444
IF +E+DV+ WNSIISGL ++ + P + S+I++C+ L
Sbjct: 473 SIFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLS 532
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
++ G +HA K G NVYVG+AL++ YAKCG+ AR+ FD M KN V W+ MI
Sbjct: 533 SIPHGRQIHAQVMKDGY-DQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMI 591
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GY G G ++ LF ML E +P+ V F +L+ CSH+G+V + F SM +
Sbjct: 592 HGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGI 651
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
+P +HY C++D L RAGR E + MP + D ++ L C ++ +LG+ +
Sbjct: 652 IPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAE 711
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+ + P YVL+SN+YAS GR + VR LM RG+ K G S +D
Sbjct: 712 HLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWID 762
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/607 (26%), Positives = 282/607 (46%), Gaps = 74/607 (12%)
Query: 69 HALLIVDGLT--NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HALL L ND +S G + AR + MP + S+ +I +
Sbjct: 61 HALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPG 120
Query: 127 -YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
+ VE Y MR +F + VL AC L + +G + H VKVG + FV
Sbjct: 121 DGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVEN 180
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ MY KC +G + ++F N VS+T+M+ G Q + L LF RM V
Sbjct: 181 ALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPV 240
Query: 245 NQITLGSLVTACAK--------LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+ +++ S++ ACA+ RA G+ +H +++ G + H+ +L+DMY KC
Sbjct: 241 DPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVE 300
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ +A VF+ L S+ +VSW +I G+ Q G KA+++ + + A F PN VT +++L++
Sbjct: 301 MDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLAS 360
Query: 357 SAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ R VHS AR +F+ S V WN
Sbjct: 361 CIK------ARDVHS----------------------------ARAMFDKISRPSVTTWN 386
Query: 417 SIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+++SG NV PD TL ++S+C+ LG + G +H+ S +
Sbjct: 387 TLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRF 446
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
LL ++++V + L++ Y+KCG AR +F+ M E++ V W+++I G + +
Sbjct: 447 -LLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDF 505
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M + P E + +++++CS + G + + +D + ++ ++D+ A
Sbjct: 506 FKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKD-GYDQNVYVGSALIDMYA 564
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI---KKML--ELHPDKA 634
+ G +++A F + M ++ ++ + +HG Y++ LG+ + + ML E PD
Sbjct: 565 KCGNMDDARLFFDTMMMK-NIVAWNEMIHG---YAQNGLGDKAVELFEYMLTTEQKPDAV 620
Query: 635 CYYVLVS 641
+ +++
Sbjct: 621 TFIAVLT 627
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 206/399 (51%), Gaps = 17/399 (4%)
Query: 36 ELDQTFASFHSLPSIPCLN----LLGLCKSTGSLKAFHALLIVDGL---TNDKCNTKLVS 88
E+D+ F SLPS+ ++ + G + KA L ++ N+ + L++
Sbjct: 300 EMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLA 359
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
V AR++FD + P ++ ++ Y + ++D +E ++ M+ + + D
Sbjct: 360 SCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTT 419
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ +L +C +L +D G +VH V+ + D FV +GLVDMY+KC IG +R +F++
Sbjct: 420 LAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMT 479
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+++VV W S+I+G + +E F +MRE + + + S++ +C++L ++ G+
Sbjct: 480 ERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQ 539
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H ++K G + N ++ +AL+DMY KCGN+ DAR FD + ++V+W MI GY Q+G
Sbjct: 540 IHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGL 599
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN-----MGRMVHSLGIRLGLEDYT 382
DKA++LF + P+ VT +VL+ + G ++ M +S GI E YT
Sbjct: 600 GDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYT 659
Query: 383 VINALVDMYAKCHVIADAR-YIFETTSEKDVIAWNSIIS 420
L+D + + I + + D I W +++
Sbjct: 660 C---LIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLA 695
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 227/468 (48%), Gaps = 35/468 (7%)
Query: 189 MYAKCR--DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC-AQEGLVLFNRMREGFVEGN 245
+ A CR D+ ++R + +N VSW ++I+ ++ E + ++ RMR +
Sbjct: 81 LSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPT 140
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
TL S+++AC L AL G+ HG +K+G++ N + ALL MY KCG++ DA +F
Sbjct: 141 HFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFY 200
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ------ 359
+ + VS+TAM+ G Q+G D AL+LF + + V+++SVL A AQ
Sbjct: 201 GMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDY 260
Query: 360 --LGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+G+ +H+L +R G D V N+L+DMY KC + +A +FE+ +++WN
Sbjct: 261 SVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWN 320
Query: 417 SIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+I+G S CA AV+V S + ++ N + LL
Sbjct: 321 ILITGFGQEGS------------CAK--AVEVLSLM-----QEAGFEPNEVTYSNLLASC 361
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
K D SAR +FD + + TW+ ++ GY + ++ LF M ++ VQP+
Sbjct: 362 IKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLA 421
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
ILS+CS G++ G + + R F M +VD+ ++ G++ A M
Sbjct: 422 VILSSCSKLGILDFGRQVHSASVR-FLLHNDMFVASGLVDMYSKCGQIGIARSIFNKM-T 479
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSN 642
E DV + + + G ++S K+M E + P ++ Y ++++
Sbjct: 480 ERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINS 527
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 52/223 (23%)
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ G HA + L S N Y A L+ + GD +AR + M +N V+W+ +I
Sbjct: 55 RAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISA 114
Query: 507 YGMQ-GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC----------- 554
GDGG ++ ++ M E + P ++LSAC +G+G +C
Sbjct: 115 LARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDA 174
Query: 555 ------------------------FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
FY M R P+ + M+ LA+ G +++AL
Sbjct: 175 NQFVENALLGMYTKCGSVGDAVRLFYGMAR-----PNEVSFTAMMGGLAQTGSIDDALRL 229
Query: 591 MENM-----PIEP--DVSLFGAFLHGCGL-YS---RFDLGEVM 622
M P++P S+ GA C YS F LG+ +
Sbjct: 230 FARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAI 272
>gi|224127716|ref|XP_002320145.1| predicted protein [Populus trichocarpa]
gi|222860918|gb|EEE98460.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 179/542 (33%), Positives = 305/542 (56%), Gaps = 33/542 (6%)
Query: 162 IDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+ EG +VH ++K+G + L ++++Y KC+D + ++FDE +NVV+W ++I G
Sbjct: 4 LREGKQVHSHVIKLGFCNVLSLQNQILNVYIKCKDFNYAHRLFDEMHVRNVVTWNTVICG 63
Query: 221 YVQNDCAQE--------GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
V DC G F +M V + ITL L+ AC +L + G+ LH +I
Sbjct: 64 LV--DCRGSDYESSVYMGFCYFRKMLLDKVGFDAITLNGLLRACLELNDVEIGRELHCFI 121
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
+K+G +NS + +AL+D+Y KCG +++AR FDE+ DLV W M+ Y + ++A
Sbjct: 122 VKLGFAVNSFVNSALVDLYGKCGLVKEARRAFDEVYCRDLVLWNVMLSCYAMNCLAEEAS 181
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMY 391
F + +F + T +S+L++ LG+ N+GR +H L I+L + D V + LVDMY
Sbjct: 182 GFFKLMQEENFMTDGFTFSSMLNSCGTLGSCNLGRQIHGLSIKLSFDLDVLVASGLVDMY 241
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLV 434
AK I DAR F+ + ++V++WN+++ G +++ PD +TL
Sbjct: 242 AKSENIDDARKAFDGMAARNVVSWNTMVVGYGRLGDGGEAMKLLIGMFQEDLRPDEITLA 301
Query: 435 SVISACAS-LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
S+I +C+S L + ++ ++AY K G + + + AL+N Y+K G A F+ +
Sbjct: 302 SIIRSCSSALTSCEI-MQVNAYVLKNGF-HAFLSIANALINAYSKGGSIAMALQCFNTVL 359
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
E + VTW+++IG Y S+ F +ML + V P++++F +LSACSH G+V EG
Sbjct: 360 EPDLVTWTSLIGAYAFHSLPKNSIDTFEEMLADGVWPDQIVFLEVLSACSHAGLVNEGLH 419
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
++S+ +D+ +P ++HY C++DLL RAG L+EA + +M I GAF+ C ++
Sbjct: 420 -YFSLMKDYHILPGLEHYTCLIDLLGRAGLLDEAFNILNSMSIGYSSDTLGAFIGACKIH 478
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
L + +K+ E+ P+K Y L+S+++AS+G W V ++ +LM+ R PGCS
Sbjct: 479 GDVKLAKWAAEKLFEMEPNKPVNYTLMSSVFASEGHWHDVARIHKLMRDRCGHGVPGCSW 538
Query: 674 VD 675
++
Sbjct: 539 ME 540
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 142/506 (28%), Positives = 252/506 (49%), Gaps = 36/506 (7%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY--- 121
K H+ +I G N +++++Y YA +FD M + ++ +I
Sbjct: 8 KQVHSHVIKLGFCNVLSLQNQILNVYIKCKDFNYAHRLFDEMHVRNVVTWNTVICGLVDC 67
Query: 122 ----FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
+ + +Y F K + ++ D + +L+AC EL D++ G ++HC IVK+G
Sbjct: 68 RGSDYESSVYMGFCYFRKMLLDKVG-FDAITLNGLLRACLELNDVEIGRELHCFIVKLGF 126
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
+SFV + LVD+Y KC + +R+ FDE +++V W M++ Y N A+E F
Sbjct: 127 AVNSFVNSALVDLYGKCGLVKEARRAFDEVYCRDLVLWNVMLSCYAMNCLAEEASGFFKL 186
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M+E + T S++ +C L + + G+ +HG +K+ +++ + + L+DMY K N
Sbjct: 187 MQEENFMTDGFTFSSMLNSCGTLGSCNLGRQIHGLSIKLSFDLDVLVASGLVDMYAKSEN 246
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL-S 355
I DAR FD + + ++VSW M+VGY + G +A+KL D P+ +T+AS++ S
Sbjct: 247 IDDARKAFDGMAARNVVSWNTMVVGYGRLGDGGEAMKLLIGMFQEDLRPDEITLASIIRS 306
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
S+ L + + + V++ ++ G + ++ NAL++ Y+K IA A F T E D++
Sbjct: 307 CSSALTSCEIMQ-VNAYVLKNGFHAFLSIANALINAYSKGGSIAMALQCFNTVLEPDLVT 365
Query: 415 WNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS- 456
W S+I L D V PD + + V+SAC+ G V G LH +S
Sbjct: 366 WTSLIGAYAFHSLPKNSIDTFEEMLADGVWPDQIVFLEVLSACSHAGLVNEG--LHYFSL 423
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGG 515
K + + T L++ + G A + ++M ++ T A IG + GD
Sbjct: 424 MKDYHILPGLEHYTCLIDLLGRAGLLDEAFNILNSMSIGYSSDTLGAFIGACKIHGD--V 481
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSA 541
LA ++ E++PN+ + T++S+
Sbjct: 482 KLAKWAAEKLFEMEPNKPVNYTLMSS 507
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 26/266 (9%)
Query: 360 LGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+G L G+ VHS I+LG + ++ N ++++Y KC A +F+ ++V+ WN++
Sbjct: 1 MGFLREGKQVHSHVIKLGFCNVLSLQNQILNVYIKCKDFNYAHRLFDEMHVRNVVTWNTV 60
Query: 419 ISGLD-----------------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
I GL D V DA+TL ++ AC L V++G LH +
Sbjct: 61 ICGLVDCRGSDYESSVYMGFCYFRKMLLDKVGFDAITLNGLLRACLELNDVEIGRELHCF 120
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K G + N +V +AL++ Y KCG + AR FD + ++ V W+ M+ Y M
Sbjct: 121 IVKLG-FAVNSFVNSALVDLYGKCGLVKEARRAFDEVYCRDLVLWNVMLSCYAMNCLAEE 179
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
+ F M E + F+++L++C G G + + + F + +V
Sbjct: 180 ASGFFKLMQEENFMTDGFTFSSMLNSCGTLGSCNLG-RQIHGLSIKLSFDLDVLVASGLV 238
Query: 576 DLLARAGRLEEALEFMENMPIEPDVS 601
D+ A++ +++A + + M VS
Sbjct: 239 DMYAKSENIDDARKAFDGMAARNVVS 264
>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g13270, chloroplastic; Flags: Precursor
gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 752
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 303/566 (53%), Gaps = 21/566 (3%)
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI-VKVGGPDSFVLTGLV 187
+ EF + M K ++ + + +AC ELR + G +H + + + P + ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
MY +CR + + ++FDE + N VS T+MI+ Y + + + LF+ M +
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
+L+ + RAL G+ +H ++++ G+ N+ + T +++MYVKCG + A+ VFD++
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
V+ T ++VGYTQ+G ALKLF D + + VL A A L LN+G+
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGK 305
Query: 368 MVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
+H+ +LGLE + +V LVD Y KC A F+ E + ++W++IISG
Sbjct: 306 QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS 365
Query: 422 -LDDNVSP------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
++ V ++ T S+ AC+ L +G +HA + K+ L+ S Y
Sbjct: 366 QFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ-YG 424
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+AL+ Y+KCG A VF++M + V W+A I G+ G+ +L LF M++ +
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 484
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN V F +L+ACSH G+V +G C +M R + P++ HY CM+D+ AR+G L+EAL
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+FM+NMP EPD + FL GC + +LGE+ +++ +L P+ YVL NLY G
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAG 604
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLV 674
+W ++ +LM +R L K CS +
Sbjct: 605 KWEEAAEMMKLMNERMLKKELSCSWI 630
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 213/443 (48%), Gaps = 23/443 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++ MY ++ A +FD M + S MI Y + V + M +
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +++ +LK+ R +D G ++H +++ G ++ + TG+V+MY KC + +++VFD
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ K V+ T ++ GY Q A++ L LF + VE + ++ ACA L L+
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H + K+G+E + T L+D Y+KC + A F E+ + VSW+A+I GY Q
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 325 SGYPDKALKLFTDKKWADF-FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDY 381
++A+K F + + N T S+ A + L + N+G VH+ I+ L Y
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDD 424
+AL+ MY+KC + DA +FE+ D++AW + ISG +
Sbjct: 424 GE-SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 482
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P++VT ++V++AC+ G V+ G ++ ++ + +++ YA+ G
Sbjct: 483 GMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 542
Query: 485 ARMVFDAMR-EKNTVTWSAMIGG 506
A M E + ++W + G
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSG 565
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 208/645 (32%), Positives = 326/645 (50%), Gaps = 32/645 (4%)
Query: 69 HALLIVDGLTND--KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H+L + G D CN +++ Y ++ A +FD MP D S+ MI +
Sbjct: 21 HSLAVKLGTIADVYTCNN-ILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGN 79
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+ + +CMR E D + F +LK G +VH I+K+G + + +
Sbjct: 80 LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+DMYAKC + + F N VSW +MI GY Q + L + M + + +
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T L+ + LHG I+K G+E+ + + AL+ Y KCG++ DA+ +FD
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFD 259
Query: 306 ELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
I DLV+W +++ Y D A KL D + F P+ + S++SA N
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319
Query: 365 MGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHV--IADARYIFETTSEKDVIAWNSIISG 421
GR +H L I+ G E I NAL+ MY K + +A IFE+ KD ++WNSI++G
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379
Query: 422 LDDN-VSPDAV----------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
L S DAV + +V+ +C+ L Q+G +H + K GL S
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGL-ES 438
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
N +V ++L+ Y+KCG + AR F+ + +++TW+A++ GY G +L LF M
Sbjct: 439 NEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLME 498
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
++V+ + + F +L+ACSH G+V +G K M D+ P M+HY C VDL R+GRL
Sbjct: 499 EKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRL 558
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
EEA +E MP +PD +++ FL C +L + +LE+ P++ C YVL+SN+Y
Sbjct: 559 EEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMY 618
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFS 683
+ RW +V+ LMK+RG+ K PG S ++++ IA D S
Sbjct: 619 GNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHS 663
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 312/578 (53%), Gaps = 30/578 (5%)
Query: 126 LYKDIVEFYKCMRKRLKEHDN--FVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFV 182
LY ++F+ + ++ FV V+KAC G ++HC G D V
Sbjct: 44 LYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIV 103
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGF 241
++ MYAK DI S+RQVFD ++ ++W SMI Y+QN E L + GF
Sbjct: 104 SNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGF 163
Query: 242 VEGNQITLGSLVTACAKLRAL--HQGKWLHGYIL---KIGIEINSHLVTALLDMYVKCGN 296
+ ++ L S+V+ C + L G+ +HG ++ +I I+ + L TA +D Y +CG+
Sbjct: 164 LPKPEL-LASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGD 222
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
ARSVFDE+ + VSWTA+I G + D AL + + + PN VT+ ++L+A
Sbjct: 223 SLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAA 282
Query: 357 SAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKC-HVIADARYIFETTSEKDVIA 414
A+ G + G+ +H R G + ++ AL+ +Y +C + A IFE +S +DV+
Sbjct: 283 CARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVL 342
Query: 415 WNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
W+SII + P+ VTL++VISAC +L + + G +H Y
Sbjct: 343 WSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYIL 402
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K G+ +++V AL+N YAKCG +R +F M +++VTW++MI YG+ G G +L
Sbjct: 403 KFGI-GFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQAL 461
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
F +M V+ + V F +LSAC+H G+V EG + F + D + +++HY C++DL
Sbjct: 462 QHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDL 521
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYY 637
R+G+LE+ALE + MP++P ++ + + C L+ R D+ E + +++ P+ A Y
Sbjct: 522 HGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASY 581
Query: 638 VLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
L+S ++A GRW+ + QVRE MK + L K G S ++
Sbjct: 582 TLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIE 619
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 158/546 (28%), Positives = 254/546 (46%), Gaps = 58/546 (10%)
Query: 39 QTFASFHSLPSIPCLNLLGLCKSTGSLKAFHAL--------LIVDGLTNDKCNTKLVSMY 90
Q S H SIP + L + K+ S FHA I T+ + ++SMY
Sbjct: 54 QLHFSAHHFNSIPFV-LPSVIKAC-SFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMY 111
Query: 91 GSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF- 149
F ++ AR VFD+MP+ D ++ MI Y N L + ++ K +F F
Sbjct: 112 AKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLK----------DFYFL 161
Query: 150 -----SKVLKACCEL--RDIDEGMKVHCEI---VKVGGP-----DSFVLTGLVDMYAKCR 194
++L + + R++D G ++ +I V V G F+ T VD Y +C
Sbjct: 162 GFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCG 221
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
D +R VFDE KN VSWT++I+G N L + M+ V N++TL +L+
Sbjct: 222 DSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLA 281
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG-NIRDARSVFDELCSIDLV 313
ACA+ + GK +HGY + G + AL+ +Y +CG ++ A +F+ D+V
Sbjct: 282 ACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVV 341
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
W+++I Y + G DKALKLF + + PN+VT+ +V+SA L + G ++H
Sbjct: 342 LWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYI 401
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------- 422
++ G+ V NAL++MYAKC + D+R IF +D + WNS+IS
Sbjct: 402 LKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQAL 461
Query: 423 -------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ V DAVT ++V+SAC G V G L + + L++
Sbjct: 462 QHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDL 521
Query: 476 YAKCGDAQSARMVFDAMREKNTV-TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
+ + G + A + M K + WS+++ + G + +L S ++ E PN
Sbjct: 522 HGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSE--PNNAA 579
Query: 535 FTTILS 540
T+LS
Sbjct: 580 SYTLLS 585
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 199/653 (30%), Positives = 319/653 (48%), Gaps = 67/653 (10%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + +L + H L + GL ++ L+ MY G V A +FD M +P
Sbjct: 147 SVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSP 206
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL--------RD 161
+ SF M+ + D + + M + D S VL AC + R
Sbjct: 207 NEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARA 266
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
I +H +V+ G D V L+DMYAK + + +VF+ ++VSW ++ G
Sbjct: 267 IRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTG 326
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
Y Q C + L + + M+E E N++T +++ +C K R
Sbjct: 327 YGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKAR-------------------- 366
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
++ AR++FD++ + +W ++ GY Q ++LF +
Sbjct: 367 ---------------DVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQH 411
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
+ P+ T+A +LS ++LG L +G+ VHS ++L L D V + L+DMY+KC +
Sbjct: 412 QNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGI 471
Query: 400 ARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACAS 442
A+ IF +E+DV+ WNS+ISGL ++ + P + S+I++CA
Sbjct: 472 AQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCAR 531
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L ++ G +HA K G NVYVG++L++ YAKCG+ AR+ F+ M KN V W+
Sbjct: 532 LSSIPQGRQIHAQVLKDGY-DQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNE 590
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI GY G G ++ LF ML + +P+ V F +L+ CSH+G+V E F SM ++
Sbjct: 591 MIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNY 650
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P ++HY C++D L RAGR E + ++ MP + D L+ L C ++ +LGE
Sbjct: 651 GIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFA 710
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
K + L P YVL+SN+YA+ GR + VR LM RG+ K G S V+
Sbjct: 711 AKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVN 763
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 149/607 (24%), Positives = 284/607 (46%), Gaps = 80/607 (13%)
Query: 44 FHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVF 103
+SL +PC +L+AF AL N +S G + AR +
Sbjct: 54 LYSLSGLPC----------HALRAFRAL----PRPNVYSYNAAISAACRAGDLAAARDLL 99
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
MP+ + S+ +I +D + +E Y+ M + NF + VL AC + +D
Sbjct: 100 GRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALD 159
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
+G + H VKVG + FV GL+ MY KC + + ++FD N VS+T+M+ G
Sbjct: 160 DGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLA 219
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK--------LRALHQGKWLHGYILK 274
Q+ + L LF RM + + + + S++ ACA+ RA+ + +H +++
Sbjct: 220 QSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVR 279
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
G + + H+ +L+DMY K + +A VF+ + S+ +VSW ++ GY Q G ++AL++
Sbjct: 280 KGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEV 339
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKC 394
+ + F PN VT +++L++ K
Sbjct: 340 LDLMQESGFEPNEVTYSNMLASC----------------------------------IKA 365
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVI 437
+ AR +F+ S+ V WN+++SG NV PD TL ++
Sbjct: 366 RDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVIL 425
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
S C+ LG +++G +H+ S K LL ++++V + L++ Y+KCG A+++F+ M E++
Sbjct: 426 STCSRLGILELGKQVHSASVKL-LLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTERDV 484
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V W++MI G + + F M + P E + +++++C+ + +G +
Sbjct: 485 VCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQ 544
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
+ +D + ++ ++D+ A+ G +++A F M ++ ++ + +HG Y++
Sbjct: 545 VLKD-GYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVK-NIVAWNEMIHG---YAQNG 599
Query: 618 LGEVMIK 624
GE ++
Sbjct: 600 FGEKAVE 606
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 241/497 (48%), Gaps = 38/497 (7%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
P+ + + + D+ ++R + D+N VSW ++IA ++D E L ++ M
Sbjct: 74 PNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGM 133
Query: 238 -REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+EG N TL S+++AC + AL G+ HG +K+G++ N + LL MY KCG+
Sbjct: 134 LQEGLAPTN-FTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGS 192
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ DA +FD + S + VS+TAM+ G QSG D AL+LF + + V ++SVL A
Sbjct: 193 VADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGA 252
Query: 357 SAQ--LGNLNMGRM------VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
AQ G+ N+ R +H+L +R G + D V N+L+DMYAK + +A +FE+
Sbjct: 253 CAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESM 312
Query: 408 SEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
S +++WN +++G LG + + + G + V
Sbjct: 313 SSVSIVSWNILVTGY------------------GQLGCYERALEVLDLMQESGFEPNEVT 354
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
L + K D SAR +FD + + + TW+ ++ GYG + ++ LF M ++
Sbjct: 355 YSNMLASCI-KARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQN 413
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
VQP+ ILS CS G++ G K +S M ++D+ ++ G++ A
Sbjct: 414 VQPDRTTLAVILSTCSRLGILELG-KQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIA 472
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYA 645
+ + NM E DV + + + G ++S + K+M E + P ++ Y +++
Sbjct: 473 -QIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMIN---- 527
Query: 646 SDGRWIRVNQVRELMKQ 662
S R + Q R++ Q
Sbjct: 528 SCARLSSIPQGRQIHAQ 544
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 208/400 (52%), Gaps = 17/400 (4%)
Query: 36 ELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFH-ALLIVDGL------TNDKCNTKLVS 88
++D+ F S+ S+ ++ L G L + AL ++D + N+ + +++
Sbjct: 301 KMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLA 360
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
V AR++FD + P ++ ++ Y +L++D +E ++ M+ + + D
Sbjct: 361 SCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTT 420
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ +L C L ++ G +VH VK+ D FV +GL+DMY+KC +G ++ +F+
Sbjct: 421 LAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMT 480
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+++VV W SMI+G + +E F +MRE + + + S++ +CA+L ++ QG+
Sbjct: 481 ERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQ 540
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H +LK G + N ++ ++L+DMY KCGN+ DAR F+ + ++V+W MI GY Q+G+
Sbjct: 541 IHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNGF 600
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN-----MGRMVHSLGIRLGLEDYT 382
+KA++LF P+ VT +VL+ + G ++ M + GIR +E YT
Sbjct: 601 GEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYT 660
Query: 383 VINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISG 421
L+D + A+ + + K D I W +++
Sbjct: 661 C---LIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAA 697
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 88/248 (35%), Gaps = 72/248 (29%)
Query: 436 VISAC-----------------------ASLGA--------VQV----GSSLHAYSTKQG 460
V+ AC A L A V++ G HA +
Sbjct: 11 VLQACIKRSGGPKPSRAHAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRA 70
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
L NVY A ++ + GD +AR + M ++N V+W+ +I G +L ++
Sbjct: 71 LPRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMY 130
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC---------------------FYSMC 559
ML E + P ++LSAC + +G +C Y+ C
Sbjct: 131 RGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKC 190
Query: 560 R---------DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP-----IEPDV--SLF 603
D+ P+ + M+ LA++G +++AL M ++P S+
Sbjct: 191 GSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVL 250
Query: 604 GAFLHGCG 611
GA C
Sbjct: 251 GACAQACA 258
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 184/539 (34%), Positives = 301/539 (55%), Gaps = 21/539 (3%)
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
L+ + + + HC ++++G D++++ L+ + VF +T N+ + ++
Sbjct: 13 LKSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTL 72
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL-RALHQGKWLHGYILKIG 276
I G V ND ++ + ++ MR+ + T ++ AC +L H G LH ++K G
Sbjct: 73 IRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTG 132
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+ + + T L+ +Y K G + DAR VFDE+ ++VSWTA+I GY +SG +AL LF
Sbjct: 133 FDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFR 192
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCH 395
P+ T+ +L A +++G+L GR + G + + V +LVDMYAKC
Sbjct: 193 GLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG 252
Query: 396 VIADARYIFETTSEKDVIAWNSIISG----------LD-------DNVSPDAVTLVSVIS 438
+ +AR +F+ EKDV+ W+++I G LD +NV PD +V V S
Sbjct: 253 SMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFS 312
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
AC+ LGA+++G+ LS+ V +GTAL++FYAKCG A+ VF MR K+ V
Sbjct: 313 ACSRLGALELGNWARGLMDGDEFLSNPV-LGTALIDFYAKCGSVAQAKEVFKGMRRKDCV 371
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
++A+I G M G G + +F M+ +QP+ F +L C+H G+V +G + F M
Sbjct: 372 VFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGM 431
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
F P+++HY CMVDL ARAG L EA + + +MP+E + ++GA L GC L+ L
Sbjct: 432 SSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQL 491
Query: 619 GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
E ++K+++EL P + +YVL+SN+Y++ RW ++R + Q+G+ K PGCS V++D
Sbjct: 492 AEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVD 550
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 246/478 (51%), Gaps = 28/478 (5%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLV---SMYGSFGHVKYARSVFDSMPNPDFYSFQV 116
KS K H LL+ GL D L+ S++ F +YA VF P+P+ + +
Sbjct: 14 KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLH--FAATQYATVVFAQTPHPNIFLYNT 71
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD-IDEGMKVHCEIVKV 175
+IR ND ++D V Y MR+ DNF F VLKAC L G+ +H ++K
Sbjct: 72 LIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKT 131
Query: 176 GGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
G D FV TGLV +Y+K + +R+VFDE +KNVVSWT++I GY+++ C E L LF
Sbjct: 132 GFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLF 191
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
+ E + + TL ++ AC+++ L G+W+ GY+ + G N + T+L+DMY KC
Sbjct: 192 RGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKC 251
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G++ +AR VFD + D+V W+A+I GY +G P +AL +F + + + P+ + V
Sbjct: 252 GSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVF 311
Query: 355 SASAQLGNLNMGRMVHSL--GIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDV 412
SA ++LG L +G L G L + + AL+D YAKC +A A+ +F+ KD
Sbjct: 312 SACSRLGALELGNWARGLMDGDEF-LSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDC 370
Query: 413 IAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+ +N++ISGL + PD T V ++ C G V G +
Sbjct: 371 VVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSG 430
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGD 512
+ ++ + +++ A+ G A+ + +M E N++ W A++GG + D
Sbjct: 431 MSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKD 488
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 208/645 (32%), Positives = 326/645 (50%), Gaps = 32/645 (4%)
Query: 69 HALLIVDGLTND--KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H+L + G D CN +++ Y ++ A +FD MP D S+ MI +
Sbjct: 21 HSLAVKLGTIADVYTCNN-ILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGN 79
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+ + +CMR E D + F +LK G +VH I+K+G + + +
Sbjct: 80 LEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSA 139
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+DMYAKC + + F N VSW +MI GY Q + L + M + + +
Sbjct: 140 LLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVD 199
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T L+ + LHG I+K G+E+ + + AL+ Y KCG++ DA+ +FD
Sbjct: 200 DGTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFD 259
Query: 306 ELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
I DLV+W +++ Y D A KL D + F P+ + S++SA N
Sbjct: 260 SSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISN 319
Query: 365 MGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHV--IADARYIFETTSEKDVIAWNSIISG 421
GR +H L I+ G E I NAL+ MY K + +A IFE+ KD ++WNSI++G
Sbjct: 320 NGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTG 379
Query: 422 LDDN-VSPDAV----------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
L S DAV + +V+ +C+ L Q+G +H + K GL S
Sbjct: 380 LSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLALKYGL-ES 438
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
N +V ++L+ Y+KCG + AR F+ + +++TW+A++ GY G +L LF M
Sbjct: 439 NEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVALDLFFLME 498
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
++V+ + + F +L+ACSH G+V +G K M D+ P M+HY C VDL R+GRL
Sbjct: 499 XKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRL 558
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
EEA +E MP +PD +++ FL C +L + +LE+ P++ C YVL+SN+Y
Sbjct: 559 EEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEMEPEEHCTYVLLSNMY 618
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFS 683
+ RW +V+ LMK+RG+ K PG S ++++ IA D S
Sbjct: 619 GNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFIAQDHS 663
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 294/542 (54%), Gaps = 20/542 (3%)
Query: 152 VLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
+ +AC +++ + +G H ++ + V P F+ ++ MY KC + +R+VFDE ++N
Sbjct: 16 LFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERN 75
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
+VSW ++I+ Y +N +G +F+ M E + N T + + L GK +H
Sbjct: 76 LVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHS 135
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+ ++ G+ N+ + TA+ +MYVKCG + A VF+++ + V+WT ++VGYTQ+
Sbjct: 136 HAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMD 195
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
AL LF + + VL A A L LN GR +H ++LGLE + +V LVD
Sbjct: 196 ALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVD 255
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVT 432
Y KC + A FE SE + ++W+++I+G +V ++ T
Sbjct: 256 FYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFT 315
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
S+ AC++L G+ HA + K L++ + +A++ Y++CG A VF+++
Sbjct: 316 YTSIFQACSALADFNSGAQAHADAIKSSLVAYQ-HGESAMITMYSRCGRLDYATRVFESI 374
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
+ + V W+A+I GY QG+ +L LF M + V+PN V F +L+ACSH+G+V EG
Sbjct: 375 DDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGR 434
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ SM ++ ++ HY CMVD+ +RAG L+EALE + +MP PD + L GC
Sbjct: 435 QYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWT 494
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
Y ++GE+ + + +L P+ Y+L+ NLYAS G+W VR++M +R L K CS
Sbjct: 495 YRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCS 554
Query: 673 LV 674
+
Sbjct: 555 WI 556
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 222/442 (50%), Gaps = 22/442 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++ MY G + AR VFD M + S+ +I Y N ++ + M + + +
Sbjct: 51 VLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPN 110
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ L++ ++ G ++H ++ G G ++ V T + +MY KC + + VF+
Sbjct: 111 GSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFE 170
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +KN V+WT ++ GY Q + + L LF +M VE ++ ++ ACA L L+
Sbjct: 171 KMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNF 230
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HG+I+K+G+E + T L+D YVKC N+ A F+ + + VSW+A+I GY Q
Sbjct: 231 GRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQ 290
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-V 383
G ++ALK F + N T S+ A + L + N G H+ I+ L Y
Sbjct: 291 MGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHG 350
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
+A++ MY++C + A +FE+ + D +AW +II+G D V
Sbjct: 351 ESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGV 410
Query: 427 SPDAVTLVSVISACASLGAVQVGSS-LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
P+AVT ++V++AC+ G V G L + S+ G +++ + +++ Y++ G Q A
Sbjct: 411 RPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYG-VATTIDHYDCMVDIYSRAGFLQEA 469
Query: 486 RMVFDAMR-EKNTVTWSAMIGG 506
+ +M + ++W ++GG
Sbjct: 470 LELIRSMPFSPDAMSWKCLLGG 491
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 208/439 (47%), Gaps = 31/439 (7%)
Query: 66 KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H+ I GL +N NT + +MY G ++ A VF+ M + ++ ++ Y
Sbjct: 131 KQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQA 190
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+ D + + M E D +VFS VLKAC L +++ G ++H IVK+G + V
Sbjct: 191 ERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVG 250
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T LVD Y KC ++ S+ + F+ + N VSW+++I GY Q +E L F +R V+
Sbjct: 251 TPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVD 310
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N T S+ AC+ L + G H +K + H +A++ MY +CG + A V
Sbjct: 311 INSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRV 370
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+ + D V+WTA+I GY G +ALKLF + PN VT +VL+A + G +
Sbjct: 371 FESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLV 430
Query: 364 NMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
GR M + G+ ++ Y + +VD+Y++ + +A + +
Sbjct: 431 IEGRQYLESMSSNYGVATTIDHY---DCMVDIYSRAGFLQEALELIRSMP---------- 477
Query: 419 ISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL-NFYA 477
SPDA++ ++ C + +++G L A + Q L G L+ N YA
Sbjct: 478 -------FSPDAMSWKCLLGGCWTYRNLEIG-ELAAENLFQ--LDPEDTAGYILMFNLYA 527
Query: 478 KCGDAQSARMVFDAMREKN 496
G + A V M E+N
Sbjct: 528 SFGKWKEAANVRKMMAERN 546
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 188/630 (29%), Positives = 325/630 (51%), Gaps = 30/630 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L++MYG AR VFD++ + + M+ Y N +++E + M
Sbjct: 256 SSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIH 315
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D F ++ +L C ++ G ++H I+K + FV L+DMYAK + + +
Sbjct: 316 PDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKH 375
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ ++ +SW ++I GYVQ + LF RM + ++++L S+++AC ++ L
Sbjct: 376 FEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVL 435
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ H +K+G+E N ++L+DMY KCG+I+DA + + +VS A+I GY
Sbjct: 436 EAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGY 495
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--ED 380
+++ L + + P+ +T AS++ + +G +H ++ GL
Sbjct: 496 ALKN-TKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGS 554
Query: 381 YTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISG-----------------L 422
+ +L+ MY +ADA +F E +S K ++ W ++ISG
Sbjct: 555 EFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMR 614
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
D+N+SPD T V+V+ ACA L ++ G +H+ G + +AL++ YAKCGD
Sbjct: 615 DNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGF-DLDELTSSALVDMYAKCGDV 673
Query: 483 QSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+S+ VF+ + +K+ ++W++MI G+ G +L +F +M + P++V F +L+A
Sbjct: 674 KSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTA 733
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH G V EG + F M + P + HY CMVDLL R G L+EA EF++ + +EP+
Sbjct: 734 CSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAM 793
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ L C ++ G+ KK++EL P + YVL+SN+YA+ G W +R M
Sbjct: 794 IWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMI 853
Query: 662 QRGLSKSPGCSLV------DLDIANDFSFS 685
++ + K PGCS + +L +A D S S
Sbjct: 854 KKDIQKIPGCSWIVVGQETNLFVAGDISHS 883
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 158/566 (27%), Positives = 272/566 (48%), Gaps = 27/566 (4%)
Query: 70 ALLIVDGLTNDKCNTKL-----VSMYGSFGHVKYARSVFDSMPNP--DFYSFQVMIRWYF 122
AL I D + N ++ ++ Y S G + A +F MP P + ++ VMI +
Sbjct: 134 ALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHA 193
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
Y++ + F+ M K + + VL A L ++ G+ VH +K G S +
Sbjct: 194 KTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIY 253
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L++MY KC+ +RQVFD KN++ W +M+ Y QN + LF M
Sbjct: 254 VASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCG 313
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ ++ T S+++ CA L G+ LH I+K N + AL+DMY K G +++A
Sbjct: 314 IHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAG 373
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
F+ + D +SW A+IVGY Q A LF P+ V++AS+LSA +
Sbjct: 374 KHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIK 433
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L G+ H L ++LGLE + ++L+DMY+KC I DA + + E+ V++ N++I+
Sbjct: 434 VLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIA 493
Query: 421 G--LDDN--------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
G L + + P +T S+I C V +G +H K+GLL
Sbjct: 494 GYALKNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCG 553
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMRE-KNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+ ++GT+LL Y A ++F K+ V W+A+I G+ +L L+ +M
Sbjct: 554 SEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREM 613
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+ + P++ F T+L AC+ + +G + +S+ F +VD+ A+ G
Sbjct: 614 RDNNISPDQATFVTVLQACALLSSLHDG-REIHSLIFHTGFDLDELTSSALVDMYAKCGD 672
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHG 609
++ +++ E + + DV + + + G
Sbjct: 673 VKSSVQVFEELATKKDVISWNSMIVG 698
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/560 (26%), Positives = 269/560 (48%), Gaps = 64/560 (11%)
Query: 130 IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVD 188
+++FY D F F+ L AC +L+++ G VH ++K G SF L+
Sbjct: 31 VLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIH 90
Query: 189 MYAKCRDIGSSRQVFDETL--DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+YAKC + +R +F + VSWT++I+GYVQ E L +F++MR V +Q
Sbjct: 91 LYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVP-DQ 149
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+ L +L+ Y+ G + DA +F +
Sbjct: 150 VAL-----------------------------------VTVLNAYISLGKLDDACQLFQQ 174
Query: 307 LCSI--DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ ++V+W MI G+ ++ + ++AL F + T+ASVLSA A L LN
Sbjct: 175 MPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALN 234
Query: 365 MGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G +VH+ I+ G E V ++L++MY KC + DAR +F+ S+K++I WN+++
Sbjct: 235 HGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYS 294
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N + PD T S++S CA ++VG LH+ K+ +SN+
Sbjct: 295 QNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKR-FTSNL 353
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+V AL++ YAK G + A F+ M ++ ++W+A+I GY + G+ +LF M+ +
Sbjct: 354 FVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILD 413
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
+ P+EV +ILSAC + ++ G + F+ + ++ ++D+ ++ G +++
Sbjct: 414 GIVPDEVSLASILSACGNIKVLEAGQQ-FHCLSVKLGLETNLFAGSSLIDMYSKCGDIKD 472
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLY-SRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
A + +MP E V A + G L ++ + + ++L L P + + L+ ++
Sbjct: 473 AHKTYSSMP-ERSVVSVNALIAGYALKNTKESINLLHEMQILGLKPSEITFASLI-DVCK 530
Query: 646 SDGRWIRVNQVRELMKQRGL 665
+ I Q+ + +RGL
Sbjct: 531 GSAKVILGLQIHCAIVKRGL 550
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 227/451 (50%), Gaps = 26/451 (5%)
Query: 54 NLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + L+A FH L + GL TN + L+ MY G +K A + SMP
Sbjct: 424 SILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPER 483
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
S +I Y L + + I ++ LK + F+ ++ C + G+++H
Sbjct: 484 SVVSVNALIAGYALKNTKESINLLHEMQILGLKPSE-ITFASLIDVCKGSAKVILGLQIH 542
Query: 170 CEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIAGYVQNDC 226
C IVK G F+ T L+ MY + + + +F E + K++V WT++I+G++QN+C
Sbjct: 543 CAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNEC 602
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ L L+ MR+ + +Q T +++ ACA L +LH G+ +H I G +++ +A
Sbjct: 603 SDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSA 662
Query: 287 LLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
L+DMY KCG+++ + VF+EL + D++SW +MIVG+ ++GY ALK+F + + P
Sbjct: 663 LVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITP 722
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFE 405
+ VT VL+A + G + GR + + + +Y I VD YA C V R+ F
Sbjct: 723 DDVTFLGVLTACSHAGWVYEGRQIFDVMV-----NYYGIEPRVDHYA-CMVDLLGRWGFL 776
Query: 406 TTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+E+ I L+ V P+A+ +++ AC G + G + SS+
Sbjct: 777 KEAEE-------FIDKLE--VEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSS 827
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
YV L N YA G+ AR + M +K+
Sbjct: 828 PYV--LLSNMYAASGNWDEARSLRRTMIKKD 856
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 142/363 (39%), Gaps = 69/363 (19%)
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
C + + W + G T+ ++ L+ + + P+ T A LSA A+L NL++GR
Sbjct: 9 CLLRVRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGR 67
Query: 368 MVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETT--SEKDVIAWNSIISGLDD 424
VHS I+ GLE + AL+ +YAKC+ + AR IF + ++W ++ISG
Sbjct: 68 AVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGY-- 125
Query: 425 NVSPDAVTLVSVISACASLGAVQVG---SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
VQ G +LH + + + +LN Y G
Sbjct: 126 ---------------------VQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGK 164
Query: 482 AQSARMVFDAM--REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
A +F M +N V W+ MI G+ +LA F M V+ + ++L
Sbjct: 165 LDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVL 224
Query: 540 SACS-----------HTGMVGEGWKC----------FYSMCR---------DFKFVPSMK 569
SA + H + +G++ Y C+ D +M
Sbjct: 225 SAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMI 284
Query: 570 HYVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGE----VM 622
+ M+ + ++ G L +E +M I PD + + L C + ++G +
Sbjct: 285 VWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAI 344
Query: 623 IKK 625
IKK
Sbjct: 345 IKK 347
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 305/563 (54%), Gaps = 27/563 (4%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
++ ++ C + + +H I+K G SF L+D Y KC I +R++FDE +
Sbjct: 4 YTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+++V+W SMI+ +V +E + L++ M V + T ++ A +++ +G+
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 269 HGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
HG + +G E++ V T ++DMY K G ++DAR VFD + D+V +TA+IVGY Q G
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGL 183
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-A 386
+AL++F D + PN T+ASVL + LG+L G+++H L ++ GLE +
Sbjct: 184 DGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTS 243
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
L+ MY+KC+++ D+ +F + + + W S I GL N +SP+
Sbjct: 244 LLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPN 303
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
TL S++ AC+SL ++ G +HA + K G+ N +V AL++ Y KCG+ + AR VF
Sbjct: 304 HFTLSSILHACSSLAMLEAGEQIHAVTVKLGV-DGNKFVDAALIHLYGKCGNVEKARSVF 362
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D++ E + V+ + MI Y G G +L LF + ++PN V F +IL AC++ G+V
Sbjct: 363 DSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVE 422
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG + F + + + HY CM+DLL RA R EEA +E PDV + L+
Sbjct: 423 EGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQWRTLLNA 481
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C ++ ++ E +KKML+ P ++L++N+YAS G+W V +++ + L K+P
Sbjct: 482 CKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTP 541
Query: 670 GCSLVDLD------IANDFSFSR 686
S VD+D +A D S R
Sbjct: 542 AMSWVDIDREVHTFMAGDLSHPR 564
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 238/487 (48%), Gaps = 20/487 (4%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
KS +LK+ H ++ G KL+ Y + AR +FD MPN ++ MI
Sbjct: 15 KSLTTLKSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMIS 74
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP- 178
+ K+ +E Y M D + FS + KA E+ EG K H V +G
Sbjct: 75 SHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEV 134
Query: 179 -DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FV TG+VDMYAK + +R VFD LDK+VV +T++I GY Q+ E L +F M
Sbjct: 135 SDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDM 194
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
++ N+ TL S++ +C L L GK +HG ++K G+E T+LL MY KC +
Sbjct: 195 VGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMV 254
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
D+ VF+ L V+WT+ IVG Q+G + AL +F + PNH T++S+L A
Sbjct: 255 EDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHAC 314
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ L L G +H++ ++LG++ ++ AL+ +Y KC + AR +F++ +E D+++ N
Sbjct: 315 SSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSIN 374
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I N + P+ VT +S++ AC + G V+ G + +
Sbjct: 375 TMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNN 434
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
+ T +++ + + A M+ + + + + W ++ + G+ +
Sbjct: 435 HSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKF 494
Query: 520 FSDMLNE 526
ML++
Sbjct: 495 MKKMLDQ 501
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 333/634 (52%), Gaps = 31/634 (4%)
Query: 69 HALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA I G +++ L++MY G A VF+++ NPD S+ ++ + +D
Sbjct: 101 HAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRSD-- 158
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
D + F M D + VL C + G ++H I+K G + FV L
Sbjct: 159 -DALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNAL 217
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN-DCAQEGLVLFNRMREGFVEGN 245
+ MY++C + +R+VFDE +K++VSW +M++GY Q + E +++F M + ++ +
Sbjct: 218 ITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLD 277
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
++ ++AC + G+ +H +KIG + + + L+ Y KC +I DA+ VF+
Sbjct: 278 HVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFE 337
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ ++VSWT MI S + A LF + + +PN VT ++ A +
Sbjct: 338 SIIDRNVVSWTTMI-----SISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEE 392
Query: 366 GRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
G+M+H + ++ L + V N+L+ MYAK ++D+ +FE + +++I+WNS+ISG
Sbjct: 393 GQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQ 452
Query: 425 N----------------VSPDAVTLVSVISACASLGAVQV--GSSLHAYSTKQGLLSSNV 466
N P+ T SV+S+ AS A+ + G H++ K GL ++N
Sbjct: 453 NGLWQEALQTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGL-NTNP 511
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
V +ALL+ YAK G + VF KN V W+A+I + GD + LF DM E
Sbjct: 512 IVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMERE 571
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
V+P+ + F +++AC GMV G++ F SM +D PS +HY MVD+L RAGRL+E
Sbjct: 572 GVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKE 631
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
A EF+ +P +S+ + L C ++ D+ + + ++E+ P + YVL+SNLYA
Sbjct: 632 AEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAE 691
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIAN 680
G W +V ++R+ M++RG+ K G S VD+ A+
Sbjct: 692 KGEWEKVAKIRKGMRERGVRKEIGFSWVDVGDAD 725
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 247/504 (49%), Gaps = 42/504 (8%)
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR-MREGFVEGN--QITLGSLVTACA 257
Q D++ + S + ++ + + E L LF + ++ GFV GN Q+T+ ++ AC
Sbjct: 33 QPLDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFV-GNIDQVTVAIVLKACC 91
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
L G +H + + G + + +L++MY K G A VF+ L + D+VSW
Sbjct: 92 GDSKL--GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNT 149
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
++ G+ +S D AL + + VT +VL+ + G +HS ++ G
Sbjct: 150 VLSGFQRS---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCG 206
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------------- 421
L+ + V NAL+ MY++C + +AR +F+ KD+++WN+++SG
Sbjct: 207 LDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVF 266
Query: 422 ---LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
L + + D V+ ISAC ++G +H+ + K G ++V V L++ Y+K
Sbjct: 267 LEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIG-YDTHVKVCNVLISTYSK 325
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
C D + A++VF+++ ++N V+W+ MI + +LF++M + V PN+V F +
Sbjct: 326 CEDIEDAKLVFESIIDRNVVSWTTMI-----SISEEDATSLFNEMRRDGVYPNDVTFVGL 380
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
+ A + +V EG + + +C F+ + ++ + A+ + ++++ E +
Sbjct: 381 IHAITMKNLVEEG-QMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYRE 439
Query: 599 DVSLFGAFLHG---CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
+S + + + G GL+ + + + ++E P++ + ++S++ +++ +R Q
Sbjct: 440 IIS-WNSLISGYAQNGLWQ--EALQTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQ 496
Query: 656 -VRELMKQRGLSKSPGCSLVDLDI 678
+ + GL+ +P S LD+
Sbjct: 497 RCHSHILKLGLNTNPIVSSALLDM 520
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 282/532 (53%), Gaps = 23/532 (4%)
Query: 165 GMKVHCEIVKV--GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G VH IVK P F+ L++MY+K S+R V T +NVVSWTS+I+G
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
QN LV F MR V N T A A LR GK +H +K G ++
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ + DMY K DAR +FDE+ +L +W A I G P +A++ F + + D
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID 204
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
PN +T + L+A + +LN+G +H L +R G + D +V N L+D Y KC I +
Sbjct: 205 GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSE 264
Query: 402 YIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV-----------------SVISACASLG 444
IF K+ ++W S+++ N + +++ SV+SACA +
Sbjct: 265 IIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMA 324
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+++G S+HA++ K + ++VG+AL++ Y KCG + + FD M EKN VT +++I
Sbjct: 325 GLELGRSIHAHAVK-ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 505 GGYGMQGDGGGSLALFSDMLNEEV--QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
GGY QG +LALF +M PN + F ++LSACS G V G K F SM +
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P +HY C+VD+L RAG +E A EF++ MPI+P +S++GA + C ++ + LG +
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+ + +L P + +VL+SN +A+ GRW N VRE +K G+ K G S +
Sbjct: 504 AENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 208/449 (46%), Gaps = 24/449 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD-IVEFYKCMRKRLKEH 144
L++MY H + AR V P + S+ +I N + +VEF++ MR+
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE-MRREGVVP 106
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVF 203
++F F KA LR G ++H VK G D FV DMY K R +R++F
Sbjct: 107 NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 166
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
DE ++N+ +W + I+ V + +E + F R N IT + + AC+ L+
Sbjct: 167 DEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLN 226
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G LHG +L+ G + + + L+D Y KC IR + +F E+ + + VSW +++ Y
Sbjct: 227 LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYV 286
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
Q+ +KA L+ + + I+SVLSA A + L +GR +H+ ++ +E
Sbjct: 287 QNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIF 346
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
+ +ALVDMY KC I D+ F+ EK+++ NS+I G
Sbjct: 347 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+P+ +T VS++SAC+ GAV+ G + + + +++ + G +
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE 466
Query: 484 SARMVFDAMREKNTVT-WSAMIGGYGMQG 511
A M + T++ W A+ M G
Sbjct: 467 RAYEFIKKMPIQPTISVWGALQNACRMHG 495
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 139/322 (43%), Gaps = 15/322 (4%)
Query: 68 FHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
H L++ G D CN L+ YG ++ + +F M + S+ ++ Y N
Sbjct: 231 LHGLVLRSGFDTDVSVCNG-LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 289
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLT 184
+ Y RK + E +F+ S VL AC + ++ G +H VK + FV +
Sbjct: 290 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 349
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFV 242
LVDMY KC I S Q FDE +KN+V+ S+I GY L LF M R
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 409
Query: 243 EGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
N +T SL++AC++ A+ G K GIE + + ++DM + G + A
Sbjct: 410 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 469
Query: 302 SVFDELCSIDLVS-WTAMIVGYTQSGYPDKALKLFTDKKWADFFP----NHVTIASVLSA 356
++ +S W A+ G P L L + P NHV +++ +A
Sbjct: 470 EFIKKMPIQPTISVWGALQNACRMHGKPQ--LGLLAAENLFKLDPKDSGNHVLLSNTFAA 527
Query: 357 SAQLGNLNMGR-MVHSLGIRLG 377
+ + N R + +GI+ G
Sbjct: 528 AGRWAEANTVREELKGVGIKKG 549
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 209/651 (32%), Positives = 343/651 (52%), Gaps = 31/651 (4%)
Query: 66 KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K+ HA L+ G + ++ Y G + A VFDSM + D S+ +MI +
Sbjct: 69 KSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSR 128
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVL 183
+ +++ R E + + AC L ++EG+K+H I++ G D V
Sbjct: 129 GASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQ 188
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFV 242
L+ MYA D+ + ++FDE +++V+SW+ MI GYVQ A+ L LF M +
Sbjct: 189 NSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASI 247
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
E + IT+ S++ ACA + G+ +HG ++ G++ + + +++DMY KC + A
Sbjct: 248 ELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFK 307
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F+E+ + VSW ++I G ++ +AL LF A F + VT+ ++L + +
Sbjct: 308 AFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVD 367
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+ +HS+ IR G E + VIN+L+D Y+KC +I A +F+ KD ++W+++I+G
Sbjct: 368 PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAG 427
Query: 422 L------DDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
D+ ++ P+ VT++S++ A + ++ H + ++GL ++
Sbjct: 428 FNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGL-AA 486
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V VGTA+L+ YAKCG+ +R FD + EKN V+W AMI GM G +LAL S+M
Sbjct: 487 EVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMK 546
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
++PN V ++LSACSH G+V EG F +M +D P ++HY CMVD+L+RAG+L
Sbjct: 547 LHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKL 606
Query: 585 EEALEFMENMP--IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
A+ +E MP + L+GA L C LG ++LEL P + Y L S+
Sbjct: 607 NSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASS 666
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSRV 687
+YA+ G W ++R L+K RG+ G SLV ++ +A D S R
Sbjct: 667 MYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPRA 717
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/473 (30%), Positives = 234/473 (49%), Gaps = 26/473 (5%)
Query: 48 PSIPCLNL-LGLCKSTGSLKA---FHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSV 102
P++ L L + C+S G+++ H +I G + L+SMY ++ A +
Sbjct: 148 PNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEEL 206
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRD 161
FD M D S+ VMI Y K ++ + M E D VLKAC D
Sbjct: 207 FDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGD 266
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
I G VH ++ G D FV ++DMY+KC D S+ + F+E +N VSW S+I+G
Sbjct: 267 ISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISG 326
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
V+ + E L LF M + +++TL +L+ +C Q K++H +++ G E+N
Sbjct: 327 LVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELN 386
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
++ +L+D Y KC I A +FD L + D VSW+AMI G+ G PD+A+ LF +
Sbjct: 387 EFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQ 446
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIAD 399
A PN VTI S+L A + +L + H + IR GL + V A++DMYAKC I
Sbjct: 447 AQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGL 506
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACAS 442
+R F+ EK++++W ++I+ N + P+ VT +SV+SAC+
Sbjct: 507 SRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSH 566
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
G V+ G S + + + + +++ ++ G SA + + M E+
Sbjct: 567 GGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPER 619
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 171/336 (50%), Gaps = 23/336 (6%)
Query: 229 EGLVLFNRMREGFVEGNQITL-GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E +++M++ + TL S++ AC+ L H GK +H +LK G + + ++
Sbjct: 32 EACSRYHQMKKAGAQLTDPTLVHSILKACSSLPVRH-GKSIHASLLKQGFDSLTSTGNSV 90
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
LD Y+K G + A VFD + S D VSW MI G+ G DK L F + F PN
Sbjct: 91 LDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNV 150
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFET 406
T+ + A LG + G +H IR G D +V N+L+ MYA + + A +F+
Sbjct: 151 STLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDE 209
Query: 407 TSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACASLGAVQV 448
E+DVI+W+ +I G + ++ D +T+VSV+ ACA+ G + +
Sbjct: 210 MCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISM 269
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G S+H +G L +++VG ++++ Y+KC D +SA F+ M +NTV+W+++I G
Sbjct: 270 GRSVHGVVICRG-LDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLV 328
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
+L+LF M + +EV +L +C +
Sbjct: 329 RTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKY 364
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D + S++ AC+SL V+ G S+HA KQG S G ++L+FY K G SA V
Sbjct: 49 DPTLVHSILKACSSL-PVRHGKSIHASLLKQG-FDSLTSTGNSVLDFYMKTGALDSALFV 106
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
FD+MR +++V+W+ MI G+ +G L F +PN + AC G +
Sbjct: 107 FDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAM 166
Query: 549 GEGWKCFYSMCRD-FKFVPSMKH 570
EG K + R F +PS+++
Sbjct: 167 EEGLKMHGYIIRSGFLDIPSVQN 189
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 300/566 (53%), Gaps = 22/566 (3%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYA 191
++ M++ +N F VLKAC +L + +H ++K + FV T VDMY
Sbjct: 40 LFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYV 99
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC + + VF E +++ SW +M+ G+ Q+ L MR + + +T+
Sbjct: 100 KCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLL 159
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS-- 309
L+ + ++++L ++ + ++IG+ ++ + L+ Y KCGN+ A ++FDE+ S
Sbjct: 160 LIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGL 219
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW +MI Y KA+ + F P+ TI ++LS+ Q L G +V
Sbjct: 220 RSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLV 279
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--- 425
HS G++LG + D V+N L+ MY+KC + AR++F S+K ++W +IS +
Sbjct: 280 HSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYM 339
Query: 426 --------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
PD VT++++IS C GA+++G + YS GL NV V A
Sbjct: 340 SEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGL-KDNVVVCNA 398
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ YAKCG A+ +F M + V+W+ MI + GD +L LF ML ++PN
Sbjct: 399 LIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPN 458
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
+ F +L AC+H G+V G +CF M + + P + HY CMVDLL R G L EALE +
Sbjct: 459 HITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEII 518
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
++MP EPD ++ A L C L+ + ++G+ + +++ EL P A YV ++N+YAS W
Sbjct: 519 KSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAEMWE 578
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDLD 677
V +R MK + KSPG S++ ++
Sbjct: 579 GVAAIRRNMKYLQVRKSPGQSIIQVN 604
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 214/423 (50%), Gaps = 29/423 (6%)
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+W S V AQ L+LF +M++ + N T ++ ACAKL L + +H ++
Sbjct: 20 TWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHAHV 79
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
LK + N + TA +DMYVKCG + DA +VF E+ D+ SW AM++G+ QSG+ D+
Sbjct: 80 LKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLS 139
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMY 391
L + + P+ VT+ ++ + ++ +L V+S GIR+G+ D +V N L+ Y
Sbjct: 140 CLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAY 199
Query: 392 AKCHVIADARYIFETTSE--KDVIAWNSIISG-----------------LDDNVSPDAVT 432
+KC + A +F+ + + V++WNS+I+ LD SPD T
Sbjct: 200 SKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDIST 259
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+++++S+C A+ G +H++ K G S+V V L+ Y+KCGD SAR +F+ M
Sbjct: 260 ILNLLSSCMQPKALFHGLLVHSHGVKLG-CDSDVCVVNTLICMYSKCGDVHSARFLFNGM 318
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG- 551
+K V+W+ MI Y +G ++ LF+ M +P+ V ++S C TG + G
Sbjct: 319 SDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGK 378
Query: 552 WKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
W YS+ K VC ++D+ A+ G +A E M VS + +
Sbjct: 379 WIDNYSINNGLK----DNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVS-WTTMITA 433
Query: 610 CGL 612
C L
Sbjct: 434 CAL 436
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 223/450 (49%), Gaps = 22/450 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T V MY G ++ A +VF MP D S+ M+ + + + + MR
Sbjct: 92 TATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIR 151
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D ++ + ++ + V+ +++G D V L+ Y+KC ++ S+ +
Sbjct: 152 PDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETL 211
Query: 203 FDETLD--KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
FDE ++VVSW SMIA Y + + + + M +G + T+ +L+++C + +
Sbjct: 212 FDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPK 271
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
AL G +H + +K+G + + +V L+ MY KCG++ AR +F+ + VSWT MI
Sbjct: 272 ALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKTCVSWTVMIS 331
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
Y + GY +A+ LF + A P+ VT+ +++S Q G L +G+ + + I GL+D
Sbjct: 332 AYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKD 391
Query: 381 YTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
V+ NAL+DMYAKC DA+ +F T + + V++W ++I+ L
Sbjct: 392 NVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELFFMML 451
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ + P+ +T ++V+ ACA G V+ G T++ ++ + + +++ + G
Sbjct: 452 EMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHL 511
Query: 483 QSARMVFDAMR-EKNTVTWSAMIGGYGMQG 511
+ A + +M E ++ WSA++ + G
Sbjct: 512 REALEIIKSMPFEPDSGIWSALLSACKLHG 541
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 155/362 (42%), Gaps = 54/362 (14%)
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
L +W + G+ AL LF K + PN+ T VL A A+L +L +++H+
Sbjct: 18 LFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHA 77
Query: 372 LGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII-----SGLDDN 425
++ + + V A VDMY KC + DA +F +D+ +WN+++ SG D
Sbjct: 78 HVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDR 137
Query: 426 VS------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
+S PDAVT++ +I + + ++ +++++ + G + +V V L+
Sbjct: 138 LSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIG-VHMDVSVANTLI 196
Query: 474 NFYAKCGDAQSARMVFDAMRE--KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
Y+KCG+ SA +FD + ++ V+W++MI Y ++ + ML+ P+
Sbjct: 197 AAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPD 256
Query: 532 EVIFTTILSAC-------------SHTGMVG--------EGWKCFYSMCRDFK----FVP 566
+LS+C SH +G C YS C D
Sbjct: 257 ISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFN 316
Query: 567 SMKHYVC-----MVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDL 618
M C M+ A G + EA+ ME +PD+ A + GCG +L
Sbjct: 317 GMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALEL 376
Query: 619 GE 620
G+
Sbjct: 377 GK 378
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 13/277 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVD-----GLTNDKC--NTKLVSMYGSFGHVKYARSVFDS 105
LNLL C +L FH LL+ G +D C NT L+ MY G V AR +F+
Sbjct: 261 LNLLSSCMQPKAL--FHGLLVHSHGVKLGCDSDVCVVNT-LICMYSKCGDVHSARFLFNG 317
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M + S+ VMI Y + + + M ++ D ++ C + ++ G
Sbjct: 318 MSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELG 377
Query: 166 MKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+ + G D+ V+ L+DMYAKC ++++F ++ VVSWT+MI N
Sbjct: 378 KWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTMITACALN 437
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHL 283
++ L LF M E ++ N IT +++ ACA + +G + + K GI
Sbjct: 438 GDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDH 497
Query: 284 VTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMI 319
+ ++D+ + G++R+A + + D W+A++
Sbjct: 498 YSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALL 534
>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
Length = 854
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 227/700 (32%), Positives = 354/700 (50%), Gaps = 50/700 (7%)
Query: 21 LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGL--- 77
LR S +P Q +LD + +LP P + + S +A HA + GL
Sbjct: 40 LRALSSITMASP-QQQLDHS-----ALP--PAIKSAAALRDARSARAIHAAALRRGLLHR 91
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP--DFYSFQVMIRWYFLNDLYKDIVEFYK 135
+ L++ Y G + A VF S+ + D SF +I L + + +
Sbjct: 92 PSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALR 151
Query: 136 CMRKRLKEHDNFVFSKVLKACCEL----RDIDEGMKVHCEIVKVG---GPDSFVLTGLVD 188
M +F VL+A L + G + H +K G G F L+
Sbjct: 152 AMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLS 211
Query: 189 MYAKCRDIGSSRQVFDETLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
MYA+ + ++++F +VV+W +M++ VQ+ E + M V +
Sbjct: 212 MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 271
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFD 305
+T S + AC++L L G+ +H Y++K + NS + +AL+DMY + AR VFD
Sbjct: 272 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 331
Query: 306 EL--CSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGN 362
+ L W AMI GY Q+G ++AL+LF + A F P T+ASVL A A+
Sbjct: 332 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 391
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
VH ++ G+ + V NAL+DMYA+ AR IF DV++WN++I+G
Sbjct: 392 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 451
Query: 422 L--------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ V P+A+TL++++ CA L A G +H Y+ + L
Sbjct: 452 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 511
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
++V VG+AL++ YAKCG +R VFD + +NT+TW+ +I YGM G GG + LF
Sbjct: 512 -DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFD 570
Query: 522 DML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
M + E +PNEV F L+ACSH+GMV G + F++M RD P+ C+VD+L R
Sbjct: 571 RMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGR 630
Query: 581 AGRLEEALEFMENMPI-EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
AGRL+EA + +M E VS + L C L+ LGE+ +++LEL P++A +YVL
Sbjct: 631 AGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVL 690
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
+ N+Y++ G+W R +VR M++RG++K PGCS +++D A
Sbjct: 691 LCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGA 730
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 185/601 (30%), Positives = 303/601 (50%), Gaps = 84/601 (13%)
Query: 157 CEL-RDIDEGMKVHCEIVKV-GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSW 214
CEL + + K+HC I+K P+ F+L LV YAK I +R+VFD+ +N+ SW
Sbjct: 19 CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMR----------------EGFV---------------- 242
++++ Y + C E +F+ M GF+
Sbjct: 79 NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY----------- 291
N+I L +++ +K +H G +HG+++K G + + + L+DMY
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQ 198
Query: 292 --------------------VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
++C I D+R +F ++ D +SWTAMI G+TQ+G +A
Sbjct: 199 AFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREA 258
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDM 390
+ LF + + + + T SVL+A + L G+ VH+ IR +D + +ALVDM
Sbjct: 259 IDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDM 318
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTL 433
Y KC I A +F + K+V++W +++ G N + PD TL
Sbjct: 319 YCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTL 378
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
SVIS+CA+L +++ G+ H + GL+S + V AL+ Y KCG + + +F M
Sbjct: 379 GSVISSCANLASLEEGAQFHCRALVSGLISF-ITVSNALVTLYGKCGSIEDSHRLFSEMS 437
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+ V+W+A++ GY G +L LF ML +P++V F +LSACS G+V +G +
Sbjct: 438 YVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQ 497
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F SM ++ + +P HY CM+DL +RAGRLEEA +F+ MP PD + + L C +
Sbjct: 498 IFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFH 557
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
++G+ + +L+L P Y+L+S++YA+ G+W V +R+ M+ +GL K PGCS
Sbjct: 558 RNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSW 617
Query: 674 V 674
+
Sbjct: 618 I 618
Score = 224 bits (572), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 151/505 (29%), Positives = 242/505 (47%), Gaps = 85/505 (16%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR--- 140
LVS Y F + YAR VFD MP + YS+ ++ Y ++ + M R
Sbjct: 48 NNLVSAYAKFDRITYARRVFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMV 107
Query: 141 ------------------LKEHDNFVF-----------SKVLKACCELRDIDEGMKVHCE 171
+K ++ ++ S +L + + G++VH
Sbjct: 108 SWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGH 167
Query: 172 IVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVV----------------- 212
+VK G S+V G LVDMY+K + +RQ FDE +KNVV
Sbjct: 168 VVKFGF-QSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIED 226
Query: 213 --------------SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
SWT+MIAG+ QN +E + LF MR +E +Q T GS++TAC
Sbjct: 227 SRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGG 286
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ AL +GK +H YI++ + N + +AL+DMY KC +I+ A +VF ++ ++VSWTAM
Sbjct: 287 VMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAM 346
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
+VGY Q+GY ++A+K+F D + P+ T+ SV+S+ A L +L G H + GL
Sbjct: 347 LVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGL 406
Query: 379 EDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
+ TV NALV +Y KC I D+ +F S D ++W +++SG
Sbjct: 407 ISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFES 466
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L PD VT + V+SAC+ G VQ G+ + K+ + T +++ +++ G
Sbjct: 467 MLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAG 526
Query: 481 DAQSARMVFDAMR-EKNTVTWSAMI 504
+ AR + M + + W++++
Sbjct: 527 RLEEARKFINKMPFSPDAIGWASLL 551
>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
Length = 856
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 227/700 (32%), Positives = 354/700 (50%), Gaps = 50/700 (7%)
Query: 21 LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGL--- 77
LR S +P Q +LD + +LP P + + S +A HA + GL
Sbjct: 42 LRALSSITMASP-QQQLDHS-----ALP--PAIKSAAALRDARSARAIHAAALRRGLLHR 93
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP--DFYSFQVMIRWYFLNDLYKDIVEFYK 135
+ L++ Y G + A VF S+ + D SF +I L + + +
Sbjct: 94 PSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALR 153
Query: 136 CMRKRLKEHDNFVFSKVLKACCEL----RDIDEGMKVHCEIVKVG---GPDSFVLTGLVD 188
M +F VL+A L + G + H +K G G F L+
Sbjct: 154 AMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLS 213
Query: 189 MYAKCRDIGSSRQVFDETLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
MYA+ + ++++F +VV+W +M++ VQ+ E + M V +
Sbjct: 214 MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 273
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFD 305
+T S + AC++L L G+ +H Y++K + NS + +AL+DMY + AR VFD
Sbjct: 274 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 333
Query: 306 EL--CSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGN 362
+ L W AMI GY Q+G ++AL+LF + A F P T+ASVL A A+
Sbjct: 334 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 393
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
VH ++ G+ + V NAL+DMYA+ AR IF DV++WN++I+G
Sbjct: 394 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 453
Query: 422 L--------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ V P+A+TL++++ CA L A G +H Y+ + L
Sbjct: 454 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 513
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
++V VG+AL++ YAKCG +R VFD + +NT+TW+ +I YGM G GG + LF
Sbjct: 514 -DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFD 572
Query: 522 DML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
M + E +PNEV F L+ACSH+GMV G + F++M RD P+ C+VD+L R
Sbjct: 573 RMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGR 632
Query: 581 AGRLEEALEFMENMPI-EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
AGRL+EA + +M E VS + L C L+ LGE+ +++LEL P++A +YVL
Sbjct: 633 AGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVL 692
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
+ N+Y++ G+W R +VR M++RG++K PGCS +++D A
Sbjct: 693 LCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGA 732
>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
Length = 696
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 302/550 (54%), Gaps = 19/550 (3%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D F+ + ++ AC +L+ ++EG ++H ++ G D + T L+ MYAKC + +++VF
Sbjct: 9 DKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVF 68
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ K++ +W+S+I+ Y + + +VL+ RM VE N +T + CA + L
Sbjct: 69 EGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLA 128
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H IL + + L +LL+MY+KC + +AR VF+ + + ++ S+TAMI Y
Sbjct: 129 DGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYV 188
Query: 324 QSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
Q+G +AL+LF+ K PN T A++L A LGNL GR VH G +
Sbjct: 189 QAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNV 248
Query: 383 VI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD--------------NVS 427
V+ NALV MY KC +AR +F++ + ++VI+W S+I+ +V
Sbjct: 249 VVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVE 308
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P V+ S ++ACA LGA+ G +H + L S + T+LL+ YA+CG AR
Sbjct: 309 PSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSMYARCGSLDDARR 366
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF+ M+ ++ + +AMI + G +L ++ M E + + + F ++L ACSHT +
Sbjct: 367 VFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSL 426
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V + F S+ D VP ++HY+CMVD+L R+GRL +A E +E MP + D + L
Sbjct: 427 VADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLL 486
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
GC + + GE +K+ EL P + YV +SN+YA+ R+ +VR+ M++RG++
Sbjct: 487 SGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTT 546
Query: 668 SPGCSLVDLD 677
S +++D
Sbjct: 547 PVAVSYIEID 556
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 156/566 (27%), Positives = 253/566 (44%), Gaps = 66/566 (11%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+L+ C +L + H LI+ G D T L+ MY G + A+ VF+ M
Sbjct: 15 SLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK 74
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
D +++ +I Y + V Y+ M E + F+ L C + + +G +H
Sbjct: 75 DLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIH 134
Query: 170 CEIVKVGGPDSFVLT-GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
I+ P VL L++MY KC ++ +R+VF+ +NV S+T+MI+ YVQ
Sbjct: 135 QRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHA 194
Query: 229 EGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E L LF+RM + +E N T +++ A L L +G+ +H ++ G + N + AL
Sbjct: 195 EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNAL 254
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ MY KCG+ +AR VFD + + +++SWT+MI Y Q G P +AL LF K D P+
Sbjct: 255 VTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLF---KRMDVEPSG 311
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETT 407
V+ +S L+A A LG L+ GR +H + L + +L+ MYA+C + DAR +F
Sbjct: 312 VSFSSALNACALLGALDEGREIHHRVVEAHLASPQMETSLLSMYARCGSLDDARRVFNRM 371
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
+D + N++I+ + + D +T VSV+ AC+ V
Sbjct: 372 KTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLV---- 427
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGD-AQSARMVFDAMREKNTVTWSAMIGGYGM 509
A C D QS +V D + M+ G
Sbjct: 428 --------------------------ADCRDFFQS--LVMDHGVVPLVEHYLCMVDVLGR 459
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G + L M Q + V + T+LS C G + G + + F+ P+
Sbjct: 460 SGRLGDAEELVETM---PYQTDAVAWMTLLSGCKRHGDLNRGERAARKV---FELAPAET 513
Query: 570 -HYVCMVDLLARAGRLEEALEFMENM 594
YV + ++ A A R ++A + M
Sbjct: 514 LPYVFLSNMYAAAKRFDDARRVRKEM 539
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 195/377 (51%), Gaps = 25/377 (6%)
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M E + ++ + SLV AC KL+AL +G+ LH +++ G + L TALL MY KCG+
Sbjct: 1 MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ DA+ VF+ + DL +W+++I Y ++G + A+ L+ PN VT A L
Sbjct: 61 LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120
Query: 357 SAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
A + L GR +H + + +D + ++L++MY KC + +AR +FE ++V ++
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSY 180
Query: 416 NSIISGL------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
++IS + + P+A T +++ A LG ++ G +H +
Sbjct: 181 TAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLA 240
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
+G +NV V AL+ Y KCG AR VFD+M +N ++W++MI Y G+ +L
Sbjct: 241 SRG-FDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEAL 299
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
LF M +V+P+ V F++ L+AC+ G + EG + + + P M+ ++ +
Sbjct: 300 NLFKRM---DVEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQME--TSLLSM 354
Query: 578 LARAGRLEEALEFMENM 594
AR G L++A M
Sbjct: 355 YARCGSLDDARRVFNRM 371
>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 196/613 (31%), Positives = 336/613 (54%), Gaps = 30/613 (4%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G V R +FD+MP + S+ + WY + +E + M + F V
Sbjct: 156 GGVDVVRRLFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVF 215
Query: 154 KACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
A D ++ ++K G D FV++ + M+++ D+ S+R VFD KN
Sbjct: 216 PAAGS-GDPSWPFLLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKN 274
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNR-MREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+ W +MI GYVQN + + LF + + V + +T S VTA ++ + + G+ LH
Sbjct: 275 IEVWNTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLH 334
Query: 270 GYILK-IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
GY++K + + L AL+ MY +CGN++ A +FD L D+VSW MI + Q+ +
Sbjct: 335 GYLMKGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFD 394
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALV 388
+ L L + + F P+ VT+ +VLSA++ G+L +G+ H IR G+E + + L+
Sbjct: 395 LEGLLLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEGLESYLI 454
Query: 389 DMYAKCHVIADARYIFET-TSEKDVIAWNSIISG-----------------LDDNVSPDA 430
DMY+K I A+ +F+ +++D + WN++I+G ++ V P +
Sbjct: 455 DMYSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTS 514
Query: 431 VTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
VTL SV+ AC +G V G +H+++ + L +NV+VGTAL++ Y+KCG+ +A VF
Sbjct: 515 VTLASVLPACDPVGGGVCAGKQIHSFALRHSL-DTNVFVGTALVDMYSKCGEISAAENVF 573
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
M EK+TVT++ MI G G G G +L+LF M ++ ++P+ V F +SAC+++G+V
Sbjct: 574 GGMTEKSTVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVD 633
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD-VSLFGAFLH 608
EG + SM F + +H+ C+VDLLA+AGR++EA +F+E++ + + ++++G+ L
Sbjct: 634 EGLSLYRSM-ETFGLAATPQHHCCIVDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLLA 692
Query: 609 GCGLYSRFDLGEVMIKKMLELHPD--KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
C + +L +K+L + A Y VL+S L+A++G W + +R+ M+ RGL
Sbjct: 693 SCKAQGKMELAAWATEKVLNIEKQYGHAGYNVLLSQLFAAEGNWSSADSLRKEMRLRGLR 752
Query: 667 KSPGCSLVDLDIA 679
K G + + + A
Sbjct: 753 KEAGSTWIKVQSA 765
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 166/633 (26%), Positives = 275/633 (43%), Gaps = 86/633 (13%)
Query: 94 GHVKYARSVF-DSMPNPDFYSF-QVMIRWYFLNDLYKDIVEFYKCMR---KRLKEHDNFV 148
G +++AR + D++P P V++ Y L + Y + + D++
Sbjct: 43 GRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALRLYALLNHAARPAPRSDHYT 102
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVL-TGLVDMYAKCR-----DIGSSR 200
+S L AC R + G VH +++ PD+ VL L+++YA C + R
Sbjct: 103 YSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVR 162
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++FD KNVVSW ++ YV+ E L +F RM E V ++ ++ A
Sbjct: 163 RLFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVFPAAGS-- 220
Query: 261 ALHQGKW---LHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
W L+G ++K G+E + L V++ + M+ + +++ AR VFD ++ W
Sbjct: 221 --GDPSWPFLLYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVW 278
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNH-VTIASVLSASAQLGNLNMGRMVHSLGI 374
MI GY Q+G +A+ LF + P+ VT S ++A++Q ++ +G+ +H +
Sbjct: 279 NTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLM 338
Query: 375 RLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------- 425
+ VI NALV MY++C + A +F+ EKD+++WN++I+ N
Sbjct: 339 KGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGL 398
Query: 426 ----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
PD VTL +V+SA ++ G +Q+G H Y + G+ + + L++
Sbjct: 399 LLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEGLE--SYLIDM 456
Query: 476 YAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y+K G A+ VFD +++ VTW+AMI GY G ++ F M+ V+P V
Sbjct: 457 YSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVT 516
Query: 535 FTTILSACSHTG----------------------MVGEGWKCFYSMCRDFKFVP------ 566
++L AC G VG YS C +
Sbjct: 517 LASVLPACDPVGGGVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGM 576
Query: 567 ---SMKHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
S Y M+ L + G E AL M + ++PD F A + C D G
Sbjct: 577 TEKSTVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGL 636
Query: 621 VMIKKM----LELHPDKACYYVLVSNLYASDGR 649
+ + M L P C V +L A GR
Sbjct: 637 SLYRSMETFGLAATPQHHCCIV---DLLAKAGR 666
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 122/259 (47%), Gaps = 6/259 (2%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP-D 110
+L +TG L K H LI G+ + + L+ MY G + A+ VFD N D
Sbjct: 419 VLSAASNTGDLQIGKQSHGYLIRHGIEGEGLESYLIDMYSKSGRIDMAQRVFDGYGNDRD 478
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL-RDIDEGMKVH 169
++ MI Y + + V ++ M + E + + VL AC + + G ++H
Sbjct: 479 EVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGGGVCAGKQIH 538
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
++ + FV T LVDMY+KC +I ++ VF +K+ V++T+MI+G Q+ +
Sbjct: 539 SFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGLGQHGFGE 598
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
L LF MR+ ++ + +T + ++AC + +G L+ + G+ ++
Sbjct: 599 RALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLAATPQHHCCIV 658
Query: 289 DMYVKCGNIRDARSVFDEL 307
D+ K G + +A + L
Sbjct: 659 DLLAKAGRVDEAYDFVESL 677
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 14/182 (7%)
Query: 49 SIPCLNLLGLCKSTG----SLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVF 103
S+ ++L C G + K H+ + L TN T LV MY G + A +VF
Sbjct: 514 SVTLASVLPACDPVGGGVCAGKQIHSFALRHSLDTNVFVGTALVDMYSKCGEISAAENVF 573
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
M ++ MI + + + + MR + + D F + AC +D
Sbjct: 574 GGMTEKSTVTYTTMISGLGQHGFGERALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVD 633
Query: 164 EGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL--DKNVVS-WTSM 217
EG+ ++ + G P +VD+ AK + + F E+L D N ++ W S+
Sbjct: 634 EGLSLYRSMETFGLAATPQHHCC--IVDLLAKAGRVDEAYD-FVESLGEDGNFIAIWGSL 690
Query: 218 IA 219
+A
Sbjct: 691 LA 692
>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
Length = 854
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 227/700 (32%), Positives = 354/700 (50%), Gaps = 50/700 (7%)
Query: 21 LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGL--- 77
LR S +P Q +LD + +LP P + + S +A HA + GL
Sbjct: 40 LRALSSITMASP-QQQLDHS-----ALP--PAIKSAAALRDARSARAIHAAALRRGLLHR 91
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP--DFYSFQVMIRWYFLNDLYKDIVEFYK 135
+ L++ Y G + A VF S+ + D SF +I L + + +
Sbjct: 92 PSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALR 151
Query: 136 CMRKRLKEHDNFVFSKVLKACCEL----RDIDEGMKVHCEIVKVG---GPDSFVLTGLVD 188
M +F VL+A L + G + H +K G G F L+
Sbjct: 152 AMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLS 211
Query: 189 MYAKCRDIGSSRQVFDETLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
MYA+ + ++++F +VV+W +M++ VQ+ E + M V +
Sbjct: 212 MYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 271
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFD 305
+T S + AC++L L G+ +H Y++K + NS + +AL+DMY + AR VFD
Sbjct: 272 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFD 331
Query: 306 EL--CSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGN 362
+ L W AMI GY Q+G ++AL+LF + A F P T+ASVL A A+
Sbjct: 332 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 391
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
VH ++ G+ + V NAL+DMYA+ AR IF DV++WN++I+G
Sbjct: 392 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITG 451
Query: 422 L--------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ V P+A+TL++++ CA L A G +H Y+ + L
Sbjct: 452 CVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL 511
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
++V VG+AL++ YAKCG +R VFD + +NT+TW+ +I YGM G GG + LF
Sbjct: 512 -DTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFD 570
Query: 522 DML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
M + E +PNEV F L+ACSH+GMV G + F++M RD P+ C+VD+L R
Sbjct: 571 RMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGR 630
Query: 581 AGRLEEALEFMENMPI-EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
AGRL+EA + +M E VS + L C L+ LGE+ +++LEL P++A +YVL
Sbjct: 631 AGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVL 690
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
+ N+Y++ G+W R +VR M++RG++K PGCS +++D A
Sbjct: 691 LCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGA 730
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 182/510 (35%), Positives = 289/510 (56%), Gaps = 20/510 (3%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ YA+ I S+RQVFD++ V +W +MI Y + E L L++RM V +
Sbjct: 45 LIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPD 104
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T ++ AC + L G+ + G + + A+L++Y KCG + +A VFD
Sbjct: 105 SSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFD 164
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
++ DLV WT MI G Q+G +A+ ++ + V + ++ A LG+ M
Sbjct: 165 KMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKM 224
Query: 366 GRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
G +H IR + D V +LVDMYAK + A +F K+VI+W+++ISG
Sbjct: 225 GLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQ 284
Query: 425 N-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
N PD+V+LVSV+ AC+ +G +++G S+H Y ++ L +
Sbjct: 285 NGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR--LHFDCV 342
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
TA+++ Y+KCG AR VFD + +++++W+A+I YG+ G G +L+LF M
Sbjct: 343 SSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETN 402
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
V+P+ F ++LSA SH+G+V +G F M ++K PS KHY CMVDLL+RAGR+EEA
Sbjct: 403 VKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEA 462
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
E +E+M EP ++++ A L GC + +F +GE+ KK+LEL+PD Y LVSN +A+
Sbjct: 463 QELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATA 522
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
RW V +VR++MK+ G+ K PG S+++++
Sbjct: 523 RRWDEVAEVRKIMKKTGMKKVPGYSVMEVN 552
Score = 224 bits (572), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/473 (29%), Positives = 242/473 (51%), Gaps = 20/473 (4%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
LL K ++ HAL+I+ G+ + N KL+ Y GH++ AR VFD P
Sbjct: 12 TLLITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVD 71
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
++ MI Y + + Y M D+ ++ VLKAC D+ G + +
Sbjct: 72 AWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQA 131
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
V G G D FV ++++YAKC + + +VFD+ +++V WT+MI G QN A+E +
Sbjct: 132 VDQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAV 191
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
++ +M + VEG+ + + L+ AC L G +HGY+++ I ++ + T+L+DMY
Sbjct: 192 DIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMY 251
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
K G++ A VF + +++SW+A+I G+ Q+G+ AL+L D + + P+ V++
Sbjct: 252 AKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLV 311
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
SVL A +Q+G L +G+ VH +R D A++DMY+KC ++ AR +F+ S +D
Sbjct: 312 SVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRD 371
Query: 412 VIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
I+WN+II+ + NV PD T S++SA + G V+ G +
Sbjct: 372 SISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFS 431
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIGG 506
+ + + +++ ++ G + A+ + ++M E W A++ G
Sbjct: 432 IMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSG 484
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 190/608 (31%), Positives = 308/608 (50%), Gaps = 83/608 (13%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
++ +LK CCE ++ + K+HC I+K + P++F+ L+ Y K ++ + VFD
Sbjct: 8 YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGF-----VEG---------------- 244
N+ SW ++++ Y + + +FN M R+G + G
Sbjct: 68 QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127
Query: 245 ---------NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
N+IT +++ C+K R + G+ ++G ILK G + + + L+DMY K G
Sbjct: 128 MLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLG 187
Query: 296 NIRDARSVFDEL----------------------------CSI---DLVSWTAMIVGYTQ 324
I DA+ FDE+ C + D +SWT MI G Q
Sbjct: 188 LIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQ 247
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+G +AL +F + + A F + T SVL+A L L G+ +H+ IR +D +
Sbjct: 248 NGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFV 307
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+ALVDMY+KC I A +F+ +K+VI+W +++ G N V
Sbjct: 308 GSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGV 367
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD TL SVIS+CA+L +++ G+ H + GL+S + V AL+ Y KCG +++
Sbjct: 368 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISF-ITVSNALITLYGKCGSTENSH 426
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F M ++ V+W+A++ GY G ++ LF ML ++P+ V F +LSACS G
Sbjct: 427 RLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAG 486
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V +G + F SM ++ +P + H C++DLL RAGRLEEA F+ NMP PDV +
Sbjct: 487 LVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATL 546
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ ++G+ ++ L P YVL+S+LYAS G+W +V Q+R M+ + +
Sbjct: 547 LSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVR 606
Query: 667 KSPGCSLV 674
K PG S +
Sbjct: 607 KEPGYSWI 614
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 181/346 (52%), Gaps = 11/346 (3%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
CNT + + G ++ ++ +F + D S+ +MI N L ++ ++ ++ MR
Sbjct: 207 CNTMITGLM-RCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAG 265
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSR 200
D F F VL AC L + EG ++H +++ D+ FV + LVDMY+KCR I S+
Sbjct: 266 FAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAE 325
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
VF KNV+SWT+M+ GY QN ++E + +F M+ VE + TLGS++++CA L
Sbjct: 326 TVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLA 385
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+L +G H L G+ + AL+ +Y KCG+ ++ +F E+ D VSWTA++
Sbjct: 386 SLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLA 445
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIR 375
GY Q G ++ + LF P+ VT VLSA ++ G + G M+ GI
Sbjct: 446 GYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIM 505
Query: 376 LGLEDYTVINALVDMYAKCHVIADAR-YIFETTSEKDVIAWNSIIS 420
++ T I +D+ + + +AR +I DV+ W +++S
Sbjct: 506 PIVDHCTCI---IDLLGRAGRLEEARNFINNMPCHPDVVGWATLLS 548
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 137/273 (50%), Gaps = 10/273 (3%)
Query: 52 CLNLLGLCKSTGSLKAFHALLI-VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
C +LL L G K HA +I D N + LV MY +K A +VF MP +
Sbjct: 280 CGSLLAL----GEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKN 335
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ M+ Y N ++ V+ + M++ E D+F V+ +C L ++EG + HC
Sbjct: 336 VISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHC 395
Query: 171 EIVKVGGPDSFVL--TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ V G SF+ L+ +Y KC +S ++F E ++ VSWT+++AGY Q A
Sbjct: 396 RAL-VSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKAN 454
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTAL 287
E + LF RM ++ + +T +++AC++ + +G ++ I + GI T +
Sbjct: 455 ETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCI 514
Query: 288 LDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMI 319
+D+ + G + +AR+ + + C D+V W ++
Sbjct: 515 IDLLGRAGRLEEARNFINNMPCHPDVVGWATLL 547
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 284/520 (54%), Gaps = 29/520 (5%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D+FV + L +Y +R+VFD + V W +++AG E L F RM
Sbjct: 157 DNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL----SGSEALEAFVRMA 212
Query: 239 -EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
G V + TL S++ A A++ G+ +H + K G+ + H+VT L+ +Y KCG++
Sbjct: 213 GAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDM 272
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
AR +FD + DLV++ A+I GY+ +G +++LF + P+ T+ +++
Sbjct: 273 ECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVH 332
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ G+ + +H+ ++ GL+ + V AL +Y + + + AR F+ EK + +WN
Sbjct: 333 SPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWN 392
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++ISG N V P+ +T+ S +SACA LGA+ +G +H +
Sbjct: 393 AMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANE 452
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L NVYV TAL++ Y KCG AR +FD+M KN V+W+ MI GYG+ G G +L L
Sbjct: 453 KL-ELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKL 511
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
+ DM++ + P F ++L ACSH G+V EG F SM D+ P ++H CMVDLL
Sbjct: 512 YKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCTCMVDLLG 571
Query: 580 RAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
RAG+L+EA E + P + P + +GA L C ++ DL ++ +K+ EL P+ Y
Sbjct: 572 RAGQLKEAFELISEFPKSAVGPGI--WGALLGACMVHKDGDLAKLASQKLFELEPENTGY 629
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YVL+SNLY S ++ VR+ K R L K+PGC+L+++
Sbjct: 630 YVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEI 669
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/505 (28%), Positives = 248/505 (49%), Gaps = 33/505 (6%)
Query: 61 STGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
++ +L+ HAL + G D + L +Y + AR VFD++P+PD + ++
Sbjct: 138 ASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLA 197
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GP 178
++ + V R D+ + VL A E+ + G VH K G
Sbjct: 198 GLSGSEALEAFVRMAGAGSVR---PDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQ 254
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
V+TGL+ +YAKC D+ +R +FD ++V++ ++I+GY N + LF +
Sbjct: 255 HEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELV 314
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ + TL +L+ + LH +++K G++ N+ + TAL +Y + ++
Sbjct: 315 GMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMD 374
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
AR FD + + SW AMI GY Q+G + A+ LF + + PN +TI+S LSA A
Sbjct: 375 SARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACA 434
Query: 359 QLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
QLG L++G+ VH + LE + V+ AL+DMY KC IA+AR IF++ K+V++WN
Sbjct: 435 QLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNV 494
Query: 418 IISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+ISG +D ++ P + T +SV+ AC+ G V+ G+++ T
Sbjct: 495 MISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDY 554
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE--KNTV---TWSAMIGGYGMQGDGGG 515
++ + T +++ + G + A F+ + E K+ V W A++G + D G
Sbjct: 555 GITPGIEHCTCMVDLLGRAGQLKEA---FELISEFPKSAVGPGIWGALLGACMVHKD--G 609
Query: 516 SLALFSDMLNEEVQPNEVIFTTILS 540
LA + E++P + +LS
Sbjct: 610 DLAKLASQKLFELEPENTGYYVLLS 634
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 198/401 (49%), Gaps = 31/401 (7%)
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ LH + G ++ + +AL +Y DAR VFD + S D V W ++ G + S
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202
Query: 326 GYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-V 383
+AL+ F A P+ T+ASVL A+A++ N MGR VH+ G + GL + V
Sbjct: 203 ----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+ L+ +YAKC + AR++F+ D++ +N++ISG N +
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGL 318
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
P + TLV++I + G + LHA+ K G L +N V TAL Y + D SAR
Sbjct: 319 RPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAG-LDANAPVSTALTTLYCRFNDMDSAR 377
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
FDAM EK +W+AMI GY G ++ALF M V+PN + ++ LSAC+ G
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+ G K + + + K ++ ++D+ + G + EA ++M + VS +
Sbjct: 438 ALSLG-KWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVS-WNVM 495
Query: 607 LHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYA 645
+ G GL+ + + K M++ LHP + + +S LYA
Sbjct: 496 ISGYGLHGQGAEALKLYKDMMDAHLHPTSSTF---LSVLYA 533
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 180/530 (33%), Positives = 289/530 (54%), Gaps = 31/530 (5%)
Query: 168 VHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
VH ++K G + F V++ LV++YAKC + ++R+VFD +NVV WT+++ GYVQN
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ + +F M E + TL + AC+ L ++ GK H +I+K I +S + A
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L +Y K G++ + F E D++SWT +I +G L+LF + + + PN
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
T+ SVLS + + + ++G VHSL +LG E + + N+LV +Y KC I +A+ +F
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241
Query: 406 TTSEKDVIAWNSIISG-------LDDNVS---------------------PDAVTLVSVI 437
K++I WN++I+G DN S PD TL S++
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
+ C+ L A++ G +HA + K G LS +V VGTAL++ Y KCG + AR F M +
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLS-DVVVGTALVDMYDKCGSIERARKAFLDMSTRTL 360
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
++W++MI + G +L LF DM +PN++ F +L+ACSH GMV E + F
Sbjct: 361 ISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEI 420
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
M +++K P M HY C+VD+ R GRL+EA + ++ M +EP+ ++ + GC + +
Sbjct: 421 MQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEE 480
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
LG +++L+L P YV++ N+Y S RW V+ VR LMK+ + K
Sbjct: 481 LGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGK 530
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 241/532 (45%), Gaps = 68/532 (12%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV++Y G + AR VFD++P + + ++ Y N + VE + M +
Sbjct: 21 LVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPS 80
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
NF S L AC L I G + H I+K DS + L +Y+K + SS + F
Sbjct: 81 NFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFR 140
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
ET +K+V+SWT++I+ N A GL LF M VE N TL S+++ C+ +++
Sbjct: 141 ETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDL 200
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G +H K+G E N + +L+ +Y+KCG I +A+++F+ + +L++W AMI G+ Q
Sbjct: 201 GMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQ 260
Query: 325 S-----------GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
+ +AL ++ + P+ T++S+L+ ++L L G +H+
Sbjct: 261 AMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQT 320
Query: 374 IRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------- 425
I+ G L D V ALVDMY KC I AR F S + +I+W S+I+ +
Sbjct: 321 IKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHAL 380
Query: 426 ----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
P+ +T V V++AC+ G V K+ + + L++
Sbjct: 381 QLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIMQKEYKIKPVMDHYGCLVDM 440
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
+ + G A FD ++ +V+PNE I+
Sbjct: 441 FVRLGRLDEA---FDVIKRM-------------------------------DVEPNEFIW 466
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEE 586
+++ C + G G FY+ + K P S + YV ++++ A R E+
Sbjct: 467 LLLIAGCRNHGNEELG---FYAAEQLLKLKPRSTETYVVLLNMYISAERWED 515
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 15/178 (8%)
Query: 54 NLLGLCKSTGSLKA---FHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L +C +L+ HA I G +D T LV MY G ++ AR F M
Sbjct: 299 SILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTR 358
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
S+ MI + + + ++ ++ MR + F VL AC +DE ++ +
Sbjct: 359 TLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALE-Y 417
Query: 170 CEIVKVGGPDSFVLTG---LVDMYAKCRDIGSSRQVFDET----LDKNVVSWTSMIAG 220
EI++ V+ LVDM+ + +G + FD ++ N W +IAG
Sbjct: 418 FEIMQKEYKIKPVMDHYGCLVDMFVR---LGRLDEAFDVIKRMDVEPNEFIWLLLIAG 472
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/665 (29%), Positives = 340/665 (51%), Gaps = 57/665 (8%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
+S + K+ H+ +I G N ++S+Y + AR++FD MP+ + S+ M+
Sbjct: 17 RSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMV 76
Query: 119 RWYFLNDLYKDIVEFYKCM-RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
+ + + + Y M ++++ + F++S VLKAC +R+++ G VH I +
Sbjct: 77 SVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKL 136
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D ++ L+DMY KC + +++VF E KN SW ++I GY + + + LF++
Sbjct: 137 DVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDK 196
Query: 237 MRE-----------GFVEG-------------------NQITLGSLVTACAKLRALHQGK 266
M E G V+ ++ T S++ AC L G+
Sbjct: 197 MPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGR 256
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-----CSIDLVSWTAMIVG 321
+H YI+K G E + + ++AL+DMY C + +A +FD+ S L W +M+ G
Sbjct: 257 EIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSG 316
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
+ +G +AL + + + + T + VL NL++ VH I G E D
Sbjct: 317 HVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELD 376
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
V + L+D+YAK I +A +FE +KDV+AW+S+I+G +
Sbjct: 377 CVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIH 436
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ D + V+ AC+SL + Q G +H+ K+G S V V TAL++ YAKCGD +
Sbjct: 437 LGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGV-VTTALIDMYAKCGDIE 495
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A +F + E +T++W+++I G G +++L M+ +PN++ +L+AC
Sbjct: 496 DALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACR 555
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H+G+V E W F S+ + +P +HY CMVD+L +AGR EEA++ + MP +PD +++
Sbjct: 556 HSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIW 615
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
+ L CG Y DL ++ + +L P+ Y+++SN+YA+ G W V++VRE +K+
Sbjct: 616 SSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVSKVRETVKKI 675
Query: 664 GLSKS 668
G ++
Sbjct: 676 GKKRA 680
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 197/433 (45%), Gaps = 67/433 (15%)
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C + R++ K LH +I+K G + ++ ++ +Y KC +I DAR++FDE+ ++VSW
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW 72
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
T M+ T S P +AL L+ + + PN ++VL A + N+ +G+MVH
Sbjct: 73 TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIF 132
Query: 375 RLGLE-DYTVINALVDMYAKC-------------------------------HVIADARY 402
+ L+ D ++NAL+DMY KC +I DA
Sbjct: 133 QAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMK 192
Query: 403 IFETTSEKDVIAWNSIISGLDDNVSP----------------DAVTLVSVISACASLGAV 446
+F+ E D+++WNSII+GL DN S D T SV+ AC +
Sbjct: 193 LFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDEL 252
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-----WS 501
+G +H Y K G SS Y +AL++ Y+ C A +FD ++V+ W+
Sbjct: 253 MLGREIHCYIIKSGFESS-CYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWN 311
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
+M+ G+ + GD +L++ S M V+ + F+ +L C + + S
Sbjct: 312 SMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLS-----LASQVHG 366
Query: 562 FKFVPSMKHYVC-----MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
F + S C ++D+ A+ G + AL E +P + DV + + + GC +
Sbjct: 367 F-VITSGYELDCVVGSILIDIYAKQGSINNALRLFERLP-DKDVVAWSSLITGCARFGSD 424
Query: 617 DLGEVMIKKMLEL 629
L + M+ L
Sbjct: 425 KLAFSLFMDMIHL 437
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 279/516 (54%), Gaps = 27/516 (5%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+DMY KCR+ + +VFD ++NVVSW+++++G+V N + L LF+ M + N
Sbjct: 418 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 477
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T + + AC L AL +G +HG+ LKIG E+ + +L+DMY KCG I +A VF
Sbjct: 478 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 537
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF--FPNHVTIASVLSASAQLGNL 363
+ L+SW AMI G+ +GY KAL F + A+ P+ T+ S+L A + G +
Sbjct: 538 RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMI 597
Query: 364 NMGRMVHSLGIRLGLE---DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
G+ +H +R G T+ +LVD+Y KC + AR F+ EK +I+W+S+I
Sbjct: 598 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLIL 657
Query: 421 GLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK--QGL 461
G N D+ L S+I A ++ G + A + K GL
Sbjct: 658 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 717
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
+S V ++++ Y KCG A F M+ K+ ++W+ +I GYG G G S+ +F
Sbjct: 718 ETS---VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFY 774
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+ML ++P+EV + +LSACSH+GM+ EG + F + P ++HY C+VDLL RA
Sbjct: 775 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 834
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
GRL+EA ++ MPI+P+V ++ L C ++ +LG+ + K +L + YV++S
Sbjct: 835 GRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMS 894
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
NLY G W REL +GL K G S V+++
Sbjct: 895 NLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIE 930
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 234/453 (51%), Gaps = 28/453 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY A VFDSMP + S+ ++ + LN K + + M ++ +
Sbjct: 418 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 477
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVF 203
F FS LKAC L +++G+++H +K+G + V G LVDMY+KC I + +VF
Sbjct: 478 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGF-EMMVEVGNSLVDMYSKCGRINEAEKVF 536
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--GNQITLGSLVTACAKLRA 261
+D++++SW +MIAG+V + L F M+E ++ ++ TL SL+ AC+
Sbjct: 537 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 596
Query: 262 LHQGKWLHGYILKIGIEINSH--LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
++ GK +HG++++ G S + +L+D+YVKCG + AR FD++ ++SW+++I
Sbjct: 597 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLI 656
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL--G 377
+GY Q G +A+ LF + + + ++S++ A L G+ + +L ++L G
Sbjct: 657 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 716
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
LE +V+N++VDMY KC ++ +A F KDVI+W +I+G
Sbjct: 717 LET-SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYE 775
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L N+ PD V ++V+SAC+ G ++ G L + + + V +++ + G
Sbjct: 776 MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAG 835
Query: 481 DAQSARMVFDAMREK-NTVTWSAMIGGYGMQGD 512
+ A+ + D M K N W ++ + GD
Sbjct: 836 RLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 868
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 123/261 (47%), Gaps = 30/261 (11%)
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
N L+DMY KC A +F++ E++V++W++++SG N +
Sbjct: 416 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 475
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+ T + + AC L A++ G +H + K G V VG +L++ Y+KCG A
Sbjct: 476 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG-FEMMVEVGNSLVDMYSKCGRINEAEK 534
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM--LNEEVQPNEVIFTTILSACSHT 545
VF + +++ ++W+AMI G+ G G +L F M N + +P+E T++L ACS T
Sbjct: 535 VFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSST 594
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIEPDVSLF- 603
GM+ G + + R PS +VDL + G L A + + + + +S
Sbjct: 595 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSS 654
Query: 604 --------GAFLHGCGLYSRF 616
G F+ GL+ R
Sbjct: 655 LILGYAQEGEFVEAMGLFKRL 675
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 129/262 (49%), Gaps = 8/262 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGL---TNDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
+LL C STG + K H L+ G ++ LV +Y G++ AR FD +
Sbjct: 586 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 645
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
S+ +I Y + + + +K +++ + D+F S ++ + + +G +
Sbjct: 646 EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 705
Query: 168 VHCEIVKV-GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+ VK+ G ++ VL +VDMY KC + + + F E K+V+SWT +I GY ++
Sbjct: 706 MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 765
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI-GIEINSHLVT 285
++ + +F M +E +++ ++++AC+ + +G+ L +L+ GI+
Sbjct: 766 GKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYA 825
Query: 286 ALLDMYVKCGNIRDARSVFDEL 307
++D+ + G +++A+ + D +
Sbjct: 826 CVVDLLGRAGRLKEAKHLIDTM 847
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 110/230 (47%), Gaps = 13/230 (5%)
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
N+ L++ Y KC + A VFD+M E+N V+WSA++ G+ + GD GSL+LFS+M
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 470
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ + PNE F+T L AC + +G + + C F ++ +VD+ ++ GR+
Sbjct: 471 RQGIYPNEFTFSTNLKACGLLNALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 529
Query: 585 EEALEFMENMPIEPDVS---LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
EA + + +S + F+H D +M + ++ PD+ + L S
Sbjct: 530 NEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDE---FTLTS 586
Query: 642 NLYA--SDGRWIRVNQVRELMKQRGL----SKSPGCSLVDLDIANDFSFS 685
L A S G Q+ + + G S + SLVDL + + FS
Sbjct: 587 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 636
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 184/569 (32%), Positives = 314/569 (55%), Gaps = 64/569 (11%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVD---MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H +++K+G ++ + L+ L++ + + + VF + N++ W +M G+
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ L L+ M + N T ++ +CAK +A +G+ +HG++LK+G +++ ++
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 284 VTALLDMYVKCGNIRDARSVFD-------------------------------ELCSIDL 312
T+L+ MYV+ G + DA VFD E+ D+
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW AMI GY ++G +AL+LF D + P+ T+ +V+SA AQ G++ +GR VH
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH-- 289
Query: 373 GIRLGLEDY------TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
L ++D+ ++NAL+D+Y+KC + A +FE KDVI+WN++I G
Sbjct: 290 ---LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMN 346
Query: 422 ------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-V 468
L +P+ VT++S++ ACA LGA+ +G +H Y K+ +N +
Sbjct: 347 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 406
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
T+L++ YAKCGD ++A VF+++ K+ +W+AMI G+ M G S LFS M +
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
QP+++ F +LSACSH+GM+ G F +M +D+K P ++HY CM+DLL +G +EA
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 526
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
E + M +EPD ++ + L C ++ +LGE + ++++ P+ YVL+SN+YAS G
Sbjct: 527 EMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
RW V + R L+ +G+ K PGCS +++D
Sbjct: 587 RWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 171/614 (27%), Positives = 280/614 (45%), Gaps = 111/614 (18%)
Query: 44 FHSLPSI-----------PCLNLLGLCKSTGSLKAFHALLIVDGLTN-DKCNTKLVS--- 88
FH LPS P L+LL CK+ SL+ HA +I GL N + +KL+
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 76
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
+ F + YA SVF ++ P+ + M R + L+ ++ Y CM +++
Sbjct: 77 LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC-------------- 193
F VLK+C + + EG ++H ++K+G D +V T L+ MY +
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 194 -RDIGS----------------SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
RD+ S ++++FDE K+VVSW +MI+GY + +E L LF
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M + V ++ T+ ++V+ACA+ ++ G+ +H +I G N +V AL+D+Y KCG
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ A +F+ L D++SW +I GYT +AL LF + + PN VT+ S+L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 357 SAQLGNLNMGRMVHS-LGIRL-GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVI 413
A LG +++GR +H + RL G+ + + + +L+DMYAKC I A +F + K +
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 414 AWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
+WN++I G + PD +T V ++SAC+ G + +G
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG------- 489
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
R +F M + +T + YG D G
Sbjct: 490 -----------------------------RHIFRTMTQDYKMT--PKLEHYGCMIDLLGH 518
Query: 517 LALFS----DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
LF + E++P+ VI+ ++L AC G V G ++ + P YV
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG--SYV 576
Query: 573 CMVDLLARAGRLEE 586
+ ++ A AGR E
Sbjct: 577 LLSNIYASAGRWNE 590
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 77/415 (18%)
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-V 383
S YP L +D + D NH ++ S+L L +L R++H+ I++GL +
Sbjct: 13 SSYPFHFLPSSSDPPY-DSIRNHPSL-SLLHNCKTLQSL---RIIHAQMIKIGLHNTNYA 67
Query: 384 INALVD---MYAKCHVIADARYIFETTSEKDVIAWNSIISGL---DDNVS---------- 427
++ L++ + + A +F+T E +++ WN++ G D VS
Sbjct: 68 LSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 428 ----PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG--- 480
P++ T V+ +CA A + G +H + K G ++YV T+L++ Y + G
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC-DLDLYVHTSLISMYVQNGRLE 186
Query: 481 DA----------------------------QSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
DA ++A+ +FD + K+ V+W+AMI GY G+
Sbjct: 187 DAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN 246
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
+L LF DM+ V+P+E T++SAC+ +G + G + + D F ++K
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG-RQVHLWIDDHGFGSNLKIVN 305
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVS---LFGAFLHGCGLYSRFDLGEVMIKK---- 625
++DL ++ G LE A E +P + +S L G + H L + M++
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 626 ----MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
ML + P AC ++ ++ GRWI V + + +K + S SL+D+
Sbjct: 366 NDVTMLSILP--ACAHLGAIDI----GRWIHV-YIDKRLKGVTNASSLRTSLIDM 413
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 202/637 (31%), Positives = 331/637 (51%), Gaps = 28/637 (4%)
Query: 66 KAFHALLIVDGLTN--DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+A H +I G + N LV+ Y G + A S+F+++ D S+ +I Y
Sbjct: 34 RAVHGQIIRTGASTCIQHANV-LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 124 NDLYKD---IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PD 179
N +++ ++ MR + + + + + KA L+ G + H +VK+ D
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
+V T LV MY K + +VF ++N +W++M++GY +E + +FN
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 240 GFVEGNQ--ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
EG+ +++++ A + G+ +H +K G+ L AL+ MY KC ++
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+A +FD + ++W+AM+ GY+Q+G +A+KLF+ A P+ TI VL+A
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ + L G+ +HS ++LG E + ALVDMYAK +ADAR F+ E+DV W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
S+ISG N + P+ T+ SV+ AC+SL +++G +H ++ K
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G V +G+AL Y+KCG + +VF K+ V+W+AMI G G G +L L
Sbjct: 453 GF-GLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F +ML E ++P++V F I+SACSH G V GW F M P + HY CMVDLL+
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLS 571
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
RAG+L+EA EF+E+ I+ + L+ L C + + +LG +K++ L ++ YV
Sbjct: 572 RAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQ 631
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+S +Y + GR V +V + M+ G+SK GCS ++L
Sbjct: 632 LSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIEL 668
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 235/451 (52%), Gaps = 29/451 (6%)
Query: 28 NQQTPTQHELDQTFASFHSLPSIP-CLNLLGLCKSTGSLKA------FHALLI-VDGLTN 79
N + + + Q F + +P L G+ K+ SL++ HAL++ + +
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 80 DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
+T LV MY G V+ VF MP + Y++ M+ Y ++ ++ + +
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 140 RLKE--HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT-GLVDMYAKCRDI 196
+E ++VF+ VL + + G ++HC +K G L+ LV MY+KC +
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ ++FD + D+N ++W++M+ GY QN + E + LF+RM ++ ++ T+ ++ AC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ + L +GK LH ++LK+G E + TAL+DMY K G + DAR FD L D+ WT
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++I GY Q+ ++AL L+ K A PN T+ASVL A + L L +G+ VH I+
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
G + + +AL MY+KC + D +F T KDV++WN++ISGL N
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 426 -------VSPDAVTLVSVISACASLGAVQVG 449
+ PD VT V++ISAC+ G V+ G
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 192/385 (49%), Gaps = 26/385 (6%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TL +T ++ R L G+ +HG I++ G L++ Y KCG + A S+F+ +
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKA---LKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D+VSW ++I GY+Q+G + ++LF + + D PN T+A + A + L +
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135
Query: 365 MGRMVHSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
+GR H+L +++ D V +LV MY K ++ D +F E++ W++++SG
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 423 ------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ S +V+S+ A+ V +G +H + K GLL
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V + AL+ Y+KC A +FD+ ++N++TWSAM+ GY G+ ++ LFS M
Sbjct: 256 -VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ ++P+E +L+ACS + EG K +S F + +VD+ A+AG L
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEG-KQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 585 EEALEFMENMPIEPDVSLFGAFLHG 609
+A + + + E DV+L+ + + G
Sbjct: 374 ADARKGFDCLQ-ERDVALWTSLISG 397
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 301/548 (54%), Gaps = 25/548 (4%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDET--LD 208
+L + + + +VH +++ G D VL + L + Y + + + FD
Sbjct: 10 LLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWK 69
Query: 209 KNVVSWTSMIAGYVQNDCA--QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+N SW ++++GY ++ + L+L+NRMR + L + AC L L G
Sbjct: 70 RNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGM 129
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG +K G++ + ++ +L++MY + G + A+ VFDE+ + V W ++ GY +
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYS 189
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT--VI 384
+ +LF + + +T+ ++ A + G+ VH L IR D + +
Sbjct: 190 KDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLE 249
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVS 427
+++DMY KC ++ +AR +FET+ E++V+ W ++ISG L +++
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESIL 309
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+ TL +++ +C+SLG+++ G S+H Y + G+ V T+ ++ YA+CG+ Q AR
Sbjct: 310 PNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF-TSFIDTYARCGNIQMARK 368
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VFD M ++N ++WS+MI +G+ G +L F +M ++ + PN V F ++LSACSH+G
Sbjct: 369 VFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGN 428
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EGWK F SM RD+ VP +HY CMVDLL RAG + EA F++NMP++P S +GA L
Sbjct: 429 VKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C ++ DL + +K+L + PD++ YVL+SN+YA G W VN VR M +G K
Sbjct: 489 SACRIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWEMVNCVRHKMGIKGYRK 548
Query: 668 SPGCSLVD 675
G S +
Sbjct: 549 PMGLSATE 556
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 241/479 (50%), Gaps = 28/479 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMP--NP 109
L++L K+ + HA +I+ G ++ + L + Y + +A + FD +P
Sbjct: 11 LSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCWKR 70
Query: 110 DFYSFQVMIRWYFLND--LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ +S+ ++ Y + Y D++ Y MR+ D+F +KAC L ++ GM
Sbjct: 71 NRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGML 130
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H +K G D +V LV+MYA+ + S+++VFDE +N V W ++ GY++
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSK 190
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY-ILKIGIEINSHLVT 285
E LF MR+ + + +TL LV AC + A +GK +HG I + I+ + +L
Sbjct: 191 DSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEA 250
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+++DMYVKC + +AR +F+ ++V WT +I G+ + +A+ LF P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILP 310
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
NH T+A++L + + LG+L G+ VH IR G+E D + +D YA+C I AR +F
Sbjct: 311 NHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVF 370
Query: 405 ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQ 447
+ +++VI+W+S+I+ N+ P++VT VS++SAC+ G V+
Sbjct: 371 DMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVK 430
Query: 448 VG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMI 504
G + + GL+ + +++ + G+ A+ D M K + W A++
Sbjct: 431 EGWKQFESMTRDYGLVPEEEHYA-CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 193/363 (53%), Gaps = 12/363 (3%)
Query: 68 FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H L + +GL +D LV MY FG ++ A+ VFD MP + + V+++ Y
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKYSK 190
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLT 184
++ + MR D ++KAC + EG VH ++ D ++
Sbjct: 191 DSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYLEA 250
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
++DMY KCR + ++R++F+ ++++NVV WT++I+G+ + + A E + LF +M +
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESILP 310
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N TL +++ +C+ L +L GK +HGY+++ GIE+++ T+ +D Y +CGNI+ AR VF
Sbjct: 311 NHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVF 370
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + +++SW++MI + +G ++AL F + K + PN VT S+LSA + GN+
Sbjct: 371 DMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVK 430
Query: 365 MG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVI-AWNSI 418
G M G+ E Y +VD+ + I +A+ + K + AW ++
Sbjct: 431 EGWKQFESMTRDYGLVPEEEHYA---CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 419 ISG 421
+S
Sbjct: 488 LSA 490
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 185/389 (47%), Gaps = 24/389 (6%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-C- 308
+L++ ++ + LH + +H ++ G + L ++L + Y++ + A + FD + C
Sbjct: 9 ALLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDRIPCW 68
Query: 309 SIDLVSWTAMIVGYTQSG--YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ SW ++ GY++S Y L L+ + + + + A LG L G
Sbjct: 69 KRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--- 422
++H L ++ GL+ D V +LV+MYA+ + A+ +F+ ++ + W ++ G
Sbjct: 129 MLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKGYLKY 188
Query: 423 --------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
D ++ DA+TL+ ++ AC ++ A + G +H S ++ + + Y+
Sbjct: 189 SKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQSGYL 248
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
++++ Y KC +AR +F+ E+N V W+ +I G+ ++ LF ML E +
Sbjct: 249 EASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQMLGESI 308
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
PN IL +CS G + G M R+ + ++ ++ +D AR G ++ A
Sbjct: 309 LPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV-NFTSFIDTYARCGNIQMAR 367
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
+ + MP + +V + + ++ G+ F+
Sbjct: 368 KVFDMMP-KRNVISWSSMINAFGINGLFE 395
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
Query: 59 CKSTGSL---KAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C S GSL K+ H +I +G+ D N T + Y G+++ AR VFD MP + S+
Sbjct: 322 CSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQMARKVFDMMPKRNVISW 381
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MI + +N L+++ ++ + M+ + ++ F +L AC ++ EG K + +
Sbjct: 382 SSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 175 VGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS-WTSMIAG 220
G P+ +VD+ + +IG ++ D K + S W ++++
Sbjct: 442 DYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 211/650 (32%), Positives = 344/650 (52%), Gaps = 32/650 (4%)
Query: 65 LKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
LKA +L D LT+ ++ Y G + A VFDSM + D S+ +MI +
Sbjct: 57 LKACSSLPGFDSLTST--GNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSR 114
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVL 183
+ +++ R E + + AC L ++EG+K+H I++ G D V
Sbjct: 115 GASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQ 174
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFV 242
L+ MYA D+ + ++FDE +++V+SW+ MI GYVQ A+ L LF M +
Sbjct: 175 NSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASI 233
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
E + IT+ S++ ACA + G+ +HG ++ G++ + + +++DMY KC + A
Sbjct: 234 ELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFK 293
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F+E+ + VSW ++I G ++ +AL LF A F + VT+ ++L + +
Sbjct: 294 AFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVD 353
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+ +HS+ IR G E + VIN+L+D Y+KC +I A +F+ KD ++W+++I+G
Sbjct: 354 PFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAG 413
Query: 422 L------DDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
D+ ++ P+ VT++S++ A + ++ H + ++GL ++
Sbjct: 414 FNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGL-AA 472
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V VGTA+L+ YAKCG+ +R FD + EKN V+W AMI GM G +LAL S+M
Sbjct: 473 EVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMK 532
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
++PN V ++LSACSH G+V EG F +M +D P ++HY CMVD+L+RAG+L
Sbjct: 533 LHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKL 592
Query: 585 EEALEFMENMP--IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
A+ +E MP + L+GA L C LG ++LEL P + Y L S+
Sbjct: 593 NSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASS 652
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSR 686
+YA+ G W ++R L+K RG+ G SLV ++ +A D S R
Sbjct: 653 MYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAGDESHPR 702
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 145/481 (30%), Positives = 234/481 (48%), Gaps = 28/481 (5%)
Query: 59 CKSTGSLKA---FHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C+S G+++ H +I G + L+SMY ++ A +FD M D S+
Sbjct: 146 CRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISW 204
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
VMI Y K ++ + M E D VLKAC DI G VH ++
Sbjct: 205 SVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVI 264
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
G D FV ++DMY+KC D S+ + F+E +N VSW S+I+G V+ + E L
Sbjct: 265 CRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALS 324
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
LF M + +++TL +L+ +C Q K++H +++ G E+N ++ +L+D Y
Sbjct: 325 LFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYS 384
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
KC I A +FD L + D VSW+AMI G+ G PD+A+ LF + A PN VTI S
Sbjct: 385 KCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILS 444
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+L A + +L + H + IR GL + V A++DMYAKC I +R F+ EK+
Sbjct: 445 LLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKN 504
Query: 412 VIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA 454
+++W ++I+ N + P+ VT +SV+SAC+ G V+ G S
Sbjct: 505 IVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFE 564
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK---NTVTWSAMIGGYGMQG 511
+ + + + +++ ++ G SA + + M E+ W A++ G
Sbjct: 565 NMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSG 624
Query: 512 D 512
+
Sbjct: 625 N 625
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 180/516 (34%), Positives = 276/516 (53%), Gaps = 27/516 (5%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+DMY KCR+ + +VFD ++NVVSWT++++G+V N L LF M + N
Sbjct: 410 LIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPN 469
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ T + + AC L AL +G +HG+ LKIG E+ + +L+DMY KCG I +A VF
Sbjct: 470 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 529
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF--FPNHVTIASVLSASAQLGNL 363
+ L+SW AMI GY +GY +AL F + A P+ T+ S+L A + G +
Sbjct: 530 WMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMI 589
Query: 364 NMGRMVHSLGIRLGLE---DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
G+ +H +R G T+ +LVD+Y KC + AR F+ EK +I+W+S+I
Sbjct: 590 YAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLIL 649
Query: 421 GLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK--QGL 461
G + D+ L S+I A +Q G + A K GL
Sbjct: 650 GYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGL 709
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
+S V +L++ Y KCG A F M+ K+ ++W+ MI GYG G G ++++F+
Sbjct: 710 ETS---VSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFN 766
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
ML ++P+EV + +LSACSH+GM+ EG + F + P ++HY C+VDLL RA
Sbjct: 767 KMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRA 826
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
GRL+EA ++ MPI+P+V ++ L C ++ +LG+ + K +L + YV++S
Sbjct: 827 GRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMS 886
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
NLY G W REL +GL K G S V+++
Sbjct: 887 NLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIE 922
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 230/453 (50%), Gaps = 28/453 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY A VFDSMP + S+ ++ + LN + + M ++ +
Sbjct: 410 LIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPN 469
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVF 203
F FS LKAC L +++G+++H +K+G + V G LVDMY+KC I + +VF
Sbjct: 470 EFTFSTNLKACGLLNALEKGLQIHGFCLKIGF-EMMVEVGNSLVDMYSKCGRINEAEKVF 528
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--GNQITLGSLVTACAKLRA 261
+ ++++SW +MIAGYV L F M+E ++ ++ TL SL+ AC+
Sbjct: 529 RWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGM 588
Query: 262 LHQGKWLHGYILKIGIEINSH--LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
++ GK +HG++++ G S + +L+D+YVKCGN+ AR FD++ ++SW+++I
Sbjct: 589 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLI 648
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL--G 377
+GY Q G +A+ LF + + ++S++ A L G+ + +L ++L G
Sbjct: 649 LGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSG 708
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
LE +V N+LVDMY KC ++ +A F KDVI+W +I+G
Sbjct: 709 LET-SVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNK 767
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L N+ PD V ++V+SAC+ G ++ G L + + + V +++ + G
Sbjct: 768 MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAG 827
Query: 481 DAQSARMVFDAMREK-NTVTWSAMIGGYGMQGD 512
+ A+ + D M K N W ++ + GD
Sbjct: 828 RLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGD 860
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 30/261 (11%)
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDDNVS----------- 427
N L+DMY KC A +F++ E++V++W +++SG L+ ++S
Sbjct: 408 NYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIY 467
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+ T + + AC L A++ G +H + K G V VG +L++ Y+KCG A
Sbjct: 468 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG-FEMMVEVGNSLVDMYSKCGRINEAEK 526
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ--PNEVIFTTILSACSHT 545
VF M ++ ++W+AMI GY G G +LA F M +++ P+E T++L ACS T
Sbjct: 527 VFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSST 586
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIEPDVSLF- 603
GM+ G + + R PS +VDL + G L A + + + + +S
Sbjct: 587 GMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSS 646
Query: 604 --------GAFLHGCGLYSRF 616
G F+ GL+ R
Sbjct: 647 LILGYAQEGDFVEAMGLFKRL 667
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 132/262 (50%), Gaps = 8/262 (3%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGL---TNDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
+LL C STG + K H L+ G ++ LV +Y G++ AR FD +
Sbjct: 578 SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
S+ +I Y + + + +K +++ + D+FV S ++ + + +G +
Sbjct: 638 EKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQ 697
Query: 168 VHCEIVKV-GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+ +VK+ G ++ V LVDMY KC + + + F E K+V+SWT MI GY ++
Sbjct: 698 MQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGL 757
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI-GIEINSHLVT 285
++ + +FN+M +E +++ ++++AC+ + +G+ L +L+ GI+
Sbjct: 758 GKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYA 817
Query: 286 ALLDMYVKCGNIRDARSVFDEL 307
++D+ + G +++A+ + D +
Sbjct: 818 CVVDLLGRAGRLKEAKHLVDTM 839
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
N+ L++ Y KC + A VFD+M E+N V+W+A++ G+ + GD GSL+LF++M
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMG 462
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ + PNE F+T L AC + +G + + C F ++ +VD+ ++ GR+
Sbjct: 463 RQGIYPNEFTFSTNLKACGLLNALEKGLQ-IHGFCLKIGFEMMVEVGNSLVDMYSKCGRI 521
Query: 585 EEA 587
EA
Sbjct: 522 NEA 524
>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
Length = 762
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 179/544 (32%), Positives = 291/544 (53%), Gaps = 20/544 (3%)
Query: 152 VLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
+ +AC +LR + +G +H + + V P + L+ MY C ++VFDE L KN
Sbjct: 93 LFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKN 152
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
+VSW +I+ Y +N ++ + LF+ M+ + N SL+ +C L GK +H
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHS 212
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
++++ + N + TA+ +MYV+CG + A+ VFD + + + V+WT ++VGYTQ+ +
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
AL+LF + + VL L + +MGR +HS ++LG E + +V LVD
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVD 332
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVT 432
Y KC I A F SE + ++W+++ISG + V ++
Sbjct: 333 FYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFI 392
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
SV ACA+ + +GS H + K+GL+S +Y +A++ Y+KCG AR F+++
Sbjct: 393 YTSVFQACAAQANLNMGSQAHGDAIKRGLVS-YLYGESAMVTMYSKCGRLDYARRAFESI 451
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
E + V W+A+I GY G+ +L F M + V+PN V F +L+ACSH+G+V E
Sbjct: 452 DEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAK 511
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ SM RD+ P++ HY CM+D +RAG L+EALE + MP EPD + + L GC
Sbjct: 512 QYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWA 571
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+ LG++ + + L P Y+L+ NLY++ G+W VR+LM +R L K CS
Sbjct: 572 HCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCS 631
Query: 673 LVDL 676
+ +
Sbjct: 632 WISV 635
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 213/446 (47%), Gaps = 30/446 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY G + VFD M + S+ ++I Y N + + + M+ +
Sbjct: 128 LLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ V+ +L++C ++ G ++H +++ + V T + +MY +C + ++ VFD
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+N V+WT ++ GY Q + L LF RM VE ++ ++ C L
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDM 307
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +I+K+G E + T L+D YVKCG+I A F + + VSW+A+I G++Q
Sbjct: 308 GRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV- 383
SG + +K+FT + N SV A A NLNMG H I+ GL Y
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
+A+V MY+KC + AR FE+ E D +AW +IISG V
Sbjct: 428 ESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487
Query: 427 SPDAVTLVSVISACASLGAVQ-----VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
P+AVT ++V++AC+ G V +GS Y K + + + T Y++ G
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDT-----YSRAGL 542
Query: 482 AQSARMVFDAMR-EKNTVTWSAMIGG 506
Q A + + M E + ++W +++GG
Sbjct: 543 LQEALELINRMPFEPDAMSWKSLLGG 568
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 179/364 (49%), Gaps = 11/364 (3%)
Query: 66 KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H+ +I L N T + +MY G ++ A+ VFD M + ++ ++ Y
Sbjct: 208 KQIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQA 267
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VL 183
+ +E + M E D FVFS VLK CC L D D G ++H IVK+G V
Sbjct: 268 KKLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVG 327
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T LVD Y KC DI S+ + F + N VSW+++I+G+ Q+ ++ + +F +R V
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N S+ ACA L+ G HG +K G+ + +A++ MY KCG + AR
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG-- 361
F+ + D V+WTA+I GY G +AL F + PN VT +VL+A + G
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507
Query: 362 ---NLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNS 417
+G M G++ ++ Y + ++D Y++ ++ +A I E D ++W S
Sbjct: 508 AEAKQYLGSMSRDYGVKPTIDHY---DCMIDTYSRAGLLQEALELINRMPFEPDAMSWKS 564
Query: 418 IISG 421
++ G
Sbjct: 565 LLGG 568
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 192/640 (30%), Positives = 322/640 (50%), Gaps = 66/640 (10%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H ++I GL +N L+ MY G A VF +P P+ +F M+ +
Sbjct: 161 HGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQI 220
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCE-LRDID---------EGMKVHCEIVKVG- 176
K+ E ++ M ++ D+ S +L C + RD+ +G ++H VK+G
Sbjct: 221 KEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGF 280
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D + L+DMYAK D+ S+ +VF +VVSW MIAGY +++ R
Sbjct: 281 ERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQR 340
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M+ E + +T +++TAC VK G+
Sbjct: 341 MQSDGYEPDDVTYINMLTAC-----------------------------------VKSGD 365
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+R R +FD + L SW A++ GY Q+ +A++LF ++ P+ T+A +LS+
Sbjct: 366 VRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDRTTLAVILSS 425
Query: 357 SAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
A+LG L G+ VH+ + G +D V ++L+++Y+KC + ++++F E DV+ W
Sbjct: 426 CAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELDVVCW 485
Query: 416 NSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
NS+++G N P + +V+S+CA L ++ G HA K
Sbjct: 486 NSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVK 545
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G L +++VG++L+ Y KCGD AR FD M +NTVTW+ MI GY GDG +L
Sbjct: 546 DGFLD-DIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHNALC 604
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
L++DM++ +P+++ + +L+ACSH+ +V EG + F +M + + VP + HY C++D L
Sbjct: 605 LYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCL 664
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
+RAGR E ++ MP + D ++ L C +++ L + +++ L P + YV
Sbjct: 665 SRAGRFNEVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASYV 724
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDI 678
L++N+Y+S G+W + VR+LM + K PG S D I
Sbjct: 725 LLANMYSSLGKWDDAHVVRDLMSHNQVRKDPGYSRNDTQI 764
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 161/624 (25%), Positives = 278/624 (44%), Gaps = 100/624 (16%)
Query: 49 SIPCLNLLGLC---KSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFD 104
S+ NL+ C K+ S K HA L L +D + + +Y H+ A VFD
Sbjct: 6 SLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFD 65
Query: 105 SMPNPDFYSFQVMIRWY------------FLNDLYKDIVEF-------YKC--MRKRLKE 143
++P+ + +S+ ++ Y FL ++ V +C R+ L
Sbjct: 66 NIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDT 125
Query: 144 HD----------NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
+D + F+ V AC L D D G + H ++KVG + +V+ L+ MYAK
Sbjct: 126 YDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAK 185
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
C + +VF + + N V++T+M+ G Q + +E LF M + + ++L S+
Sbjct: 186 CGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSM 245
Query: 253 VTACAK----------LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ CAK + QGK +H +K+G E + HL +LLDMY K G++ A
Sbjct: 246 LGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEK 305
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VF L +VSW MI GY +KA + + + P+ VT ++L+A + G+
Sbjct: 306 VFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVKSGD 365
Query: 363 LNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+ GR IF+ + +WN+I+SG
Sbjct: 366 VRTGRQ----------------------------------IFDCMPCPSLTSWNAILSGY 391
Query: 423 DDNVS-----------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+ N PD TL ++S+CA LG ++ G +HA S K G +
Sbjct: 392 NQNADHREAVELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFY-DD 450
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
VYV ++L+N Y+KCG + ++ VF + E + V W++M+ G+ + G +L+ F M
Sbjct: 451 VYVASSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLAGFSINSLGQDALSFFKKMRQ 510
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
P+E F T++S+C+ + +G + + +D F+ + ++++ + G +
Sbjct: 511 LGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKD-GFLDDIFVGSSLIEMYCKCGDVN 569
Query: 586 EALEFMENMPIEPDVSLFGAFLHG 609
A F + MP V+ + +HG
Sbjct: 570 GARCFFDVMPGRNTVT-WNEMIHG 592
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 233/540 (43%), Gaps = 100/540 (18%)
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G VH + ++ D+F+ +++Y+KC I S+ VFD KN+ SW +++A Y +
Sbjct: 25 GKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIPHKNIFSWNAILAAYCK 84
Query: 224 NDCAQEGLVLFNRM----------------REGF---------------VEGNQITLGSL 252
Q LF +M R G+ V + IT ++
Sbjct: 85 ARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDSVMLDGVIPSHITFATV 144
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
+AC L G+ HG ++K+G+E N ++V ALL MY KCG DA VF ++ +
Sbjct: 145 FSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNADALRVFRDIPEPNE 204
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ----------LGN 362
V++T M+ G Q+ +A +LF + V+++S+L A+ +
Sbjct: 205 VTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGIST 264
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
G+ +H+L ++LG E D + N+L+DMYAK + A +F + V++WN +I+G
Sbjct: 265 NAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAG 324
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
D PD VT +++++AC
Sbjct: 325 YGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTAC------------------------ 360
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
K GD ++ R +FD M + +W+A++ GY D ++ LF M
Sbjct: 361 ------------VKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQ 408
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ P+ ILS+C+ G + E K ++ + F F + ++++ ++ G++
Sbjct: 409 FQCQHPDRTTLAVILSSCAELGFL-EAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKM 467
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL--HPDKACYYVLVSN 642
E + +P E DV + + L G + S KKM +L P + + +VS+
Sbjct: 468 ELSKHVFSKLP-ELDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSS 526
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 190/440 (43%), Gaps = 68/440 (15%)
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + L +LV C +A GK +H + ++ + ++ L +++Y KC +I A
Sbjct: 3 KSKSLNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACH 62
Query: 303 VFDELCSIDLVSWTAMIVGYTQS-------------------------------GYPDKA 331
VFD + ++ SW A++ Y ++ GY +A
Sbjct: 63 VFDNIPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQA 122
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDM 390
L + P+H+T A+V SA L + + GR H + I++GLE + V+NAL+ M
Sbjct: 123 LDTYDSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCM 182
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTL 433
YAKC + ADA +F E + + + +++ GL + D+V+L
Sbjct: 183 YAKCGLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSL 242
Query: 434 VSVISACAS----------LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
S++ CA + G +H S K G ++++ +LL+ YAK GD
Sbjct: 243 SSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGF-ERDLHLCNSLLDMYAKIGDMD 301
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
SA VF + + V+W+ MI GYG + + + M ++ +P++V + +L+AC
Sbjct: 302 SAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACV 361
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE---PDV 600
+G V G + F D PS+ + ++ + EA+E M + PD
Sbjct: 362 KSGDVRTGRQIF-----DCMPCPSLTSWNAILSGYNQNADHREAVELFRKMQFQCQHPDR 416
Query: 601 SLFGAFLHGCGLYSRFDLGE 620
+ L C + G+
Sbjct: 417 TTLAVILSSCAELGFLEAGK 436
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 132/272 (48%), Gaps = 7/272 (2%)
Query: 55 LLGLCKSTGSLKA---FHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C G L+A HA G +D + L+++Y G ++ ++ VF +P D
Sbjct: 422 ILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVYSKCGKMELSKHVFSKLPELD 481
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ M+ + +N L +D + F+K MR+ F F+ V+ +C +L + +G + H
Sbjct: 482 VVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHA 541
Query: 171 EIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+IVK G D FV + L++MY KC D+ +R FD +N V+W MI GY QN
Sbjct: 542 QIVKDGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNGDGHN 601
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALL 288
L L+N M + + IT +++TAC+ + +G + + + K G+ T ++
Sbjct: 602 ALCLYNDMISSGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCII 661
Query: 289 DMYVKCGNIRDARSVFDEL-CSIDLVSWTAMI 319
D + G + + D + C D V W ++
Sbjct: 662 DCLSRAGRFNEVEVILDAMPCKDDAVVWEVVL 693
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 183/608 (30%), Positives = 324/608 (53%), Gaps = 35/608 (5%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + A +FD MP + ++ ++ Y N + + + M + ++F + L
Sbjct: 62 GRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAAL 121
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
AC +L + G +VH V+ G D+++ + L++MY++C + ++++VFD +VV
Sbjct: 122 VACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVV 181
Query: 213 SWTSMIAGYVQN---DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+TS+I+ + +N + A E L+ +M + ++ N+ T+ +++TAC ++ G+ +H
Sbjct: 182 GYTSLISAFCRNGEFELAAEALI---QMLKQGLKPNEHTMTTILTACPRV----LGQQIH 234
Query: 270 GYILK-IGIEINS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
GY++K IG+ S + TAL+D Y + G + A++VFD L ++VSW +M+ Y + G
Sbjct: 235 GYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGR 294
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINA 386
++AL++F D PN ++ VL A G++ +GR +H I+ L D V NA
Sbjct: 295 LEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNA 351
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
L+ MY + ++ + + D+++W + IS N +P+
Sbjct: 352 LLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPN 411
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
SV+S+CA + ++ G H + K G S + G AL+N Y+KCG SAR+ F
Sbjct: 412 GYAFSSVLSSCADVASLDQGMQFHCLALKLGC-DSEICTGNALINMYSKCGQMGSARLAF 470
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M + +W+++I G+ GD +L +FS M + ++P++ F +L C+H+GMV
Sbjct: 471 DVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVE 530
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG F M + F P+ HY CM+D+L R GR +EAL + +MP EPD ++ L
Sbjct: 531 EGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLAS 590
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C L+ D+G++ +++EL + YVL+SN+YA G W +VR M + G+ K
Sbjct: 591 CKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDA 650
Query: 670 GCSLVDLD 677
GCS ++++
Sbjct: 651 GCSWIEIN 658
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 220/480 (45%), Gaps = 33/480 (6%)
Query: 52 CLNLLGLCKSTGSLKA---FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP 107
C L C G+L+A H+L + G D + L+ MY G + A+ VFD M
Sbjct: 117 CNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMD 176
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+PD + +I + N ++ E M K+ + + + +L AC + G +
Sbjct: 177 SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQ 232
Query: 168 VHCEIVKVGGPDS---FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H ++K G S + T L+D Y++ + ++ VFD KNVVSW SM+ Y+++
Sbjct: 233 IHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRD 292
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+E L +F M V+ N+ L ++ AC ++ G+ LH +K + + +
Sbjct: 293 GRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVS 349
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
ALL MY + G + + ++ +++ + DLVSWT I Q+G+ +KA+ L F
Sbjct: 350 NALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFT 409
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
PN +SVLS+ A + +L+ G H L ++LG + + NAL++MY+KC + AR
Sbjct: 410 PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLA 469
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
F+ DV +WNS+I G + + PD T + V+ C G V
Sbjct: 470 FDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMV 529
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIG 505
+ G Q + +++ + G A RM+ D E + + W ++
Sbjct: 530 EEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 589
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/528 (24%), Positives = 241/528 (45%), Gaps = 63/528 (11%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
PD + ++ K + + +FD KNVV+WTS+++GY +N + L +F M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
E V N + + ACA L AL G+ +H ++ G ++ + + L++MY +CG++
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
A+ VFD + S D+V +T++I + ++G + A + PN T+ ++L+A
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 358 AQLGNLNMGRMVHSLGI-RLGLEDYTVIN--ALVDMYAKCHVIADARYIFETTSEKDVIA 414
++ +G+ +H I ++GL +V + AL+D Y++ A+ +F++ K+V++
Sbjct: 226 PRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 415 WNSIIS-----------------GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
W S++ + + V P+ L V+ AC S+G +G LH +
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAI 338
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K L+ +++ V ALL+ Y + G + + + + + V+W+ I G G ++
Sbjct: 339 KHDLI-TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 397
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG--WKCF-------------------Y 556
AL M +E PN F+++LS+C+ + +G + C Y
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMY 457
Query: 557 SMCR---------DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFG 604
S C D + + ++ A+ G +ALE M I+PD S F
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 517
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHP--DKACYYVLVSNLYASDGRW 650
L GC + GE+ + M++ + +Y + ++ +GR+
Sbjct: 518 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRF 565
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 4/173 (2%)
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S +V + LN K G A +FD M KN V W++++ GY G +LA+F+D
Sbjct: 45 SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M+ V PN+ L AC+ G + G + +S+ F C++++ +R G
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQ-VHSLAVRAGFAGDAWIGSCLIEMYSRCG 163
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDK 633
L A E + M PDV + + + F+L + +ML+ L P++
Sbjct: 164 SLPAAKEVFDRMD-SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNE 215
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/646 (31%), Positives = 336/646 (52%), Gaps = 31/646 (4%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
++L C S L K A +I G + T +V +Y GH+ AR VF + NP
Sbjct: 78 SVLAACASLEELRFGKVVQARVIKCGAEDVFVCTSIVDLYAKCGHMAEAREVFSRISNPS 137
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ VM+ Y ++ +E ++ MR E ++ + V+ AC + E +VH
Sbjct: 138 VVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHA 197
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD---KNVVSWTSMIAGYVQNDC 226
+ K G D+ V L+ M +K DI S +VF++ D +N+V+ M+ + QN
Sbjct: 198 WVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VMVTSFSQNKK 255
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ + LF RM + + ++ ++ SL++ L L+ GK +H Y LK G+ ++ + ++
Sbjct: 256 PGKAIRLFTRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLKSGLILDLTVGSS 312
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L MY KCG++ ++ S+F E+ D W +MI G+ + GY +A+ LF++ P+
Sbjct: 313 LFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPD 372
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFE 405
T+A+VL+ + L +L + +H +R G++ + +ALV+ Y+KC + AR +++
Sbjct: 373 ESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYD 432
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
E D ++ +S+ISG + S D+ + S++ A ++
Sbjct: 433 RLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESEL 492
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G+ +HAY TK GL + VG++LL Y+K G + F + + + W+A+I Y
Sbjct: 493 GAQVHAYITKIGLCTEPS-VGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYA 551
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G +L ++ M + +P++V F +LSACSH G+V EG+ SM +D+ P
Sbjct: 552 QHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPEN 611
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HYVCMVD L R+GRL EA F+ PI+PD ++G L C +Y +LG++ KK +E
Sbjct: 612 RHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAKKAIE 671
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
L P A YV +SN+ A G W V + R+LMK G+ K PG S V
Sbjct: 672 LEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 717
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/624 (27%), Positives = 297/624 (47%), Gaps = 67/624 (10%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A VF + + Y + +I N Y + + + M ++ D++ +S VL AC
Sbjct: 26 AYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACAS 85
Query: 159 LRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
L ++ G V ++K G D FV T +VD+YAKC + +R+VF + +VVSWT M+
Sbjct: 86 LEELRFGKVVQARVIKCGAEDVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVML 145
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
+GY +++ A L +F MR VE N T+ S+++AC + + + +H ++ K G
Sbjct: 146 SGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 205
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSI---DLVSWTAMIVGYTQSGYPDKALKLF 335
+++ + AL+ M K G+I + VF++L I ++V+ M+ ++Q+ P KA++LF
Sbjct: 206 LDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VMVTSFSQNKKPGKAIRLF 263
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKC 394
T P+ ++ S+LS L LN+G+ VHS ++ GL D TV ++L MY+KC
Sbjct: 264 TRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKC 320
Query: 395 HVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVI 437
+ ++ +F+ KD W S+ISG LD+ SPD TL +V+
Sbjct: 321 GSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVL 380
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
+ C+SL ++ +H Y+ + G + + +G+AL+N Y+KCG + AR V+D + E +
Sbjct: 381 TVCSSLPSLPRSKEIHGYTLRAG-IDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDP 439
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC--------------- 542
V+ S++I GY G LF DM+ + ++IL A
Sbjct: 440 VSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAY 499
Query: 543 -SHTGM-----VGEGWKCFYSM-------CRDFKFV--PSMKHYVCMVDLLARAGRLEEA 587
+ G+ VG YS C+ F + P + + ++ A+ G+ EA
Sbjct: 500 ITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYAQHGKANEA 559
Query: 588 LE---FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE---LHPDKACYYVLVS 641
L+ M+ +PD F L C + G + M++ + P+ Y +V
Sbjct: 560 LQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGIEPENRHYVCMVD 619
Query: 642 NLYASDGRWIRVNQVRELMKQRGL 665
L GR R+ + + R +
Sbjct: 620 AL----GRSGRLREAENFINTRPI 639
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 196/381 (51%), Gaps = 24/381 (6%)
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L+D ++K + +VF +TL NV W ++IAG ++N LF+ M GF
Sbjct: 9 VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T S++ ACA L L GK + ++K G E + + T+++D+Y KCG++ +AR
Sbjct: 69 QKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAR 127
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF + + +VSWT M+ GYT+S AL++F + + + N T+ SV+SA +
Sbjct: 128 EVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPS 187
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE--------------- 405
+ VH+ + G D +V AL+ M +K I + +FE
Sbjct: 188 MVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMV 247
Query: 406 ---TTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+ ++K A L + ++PD ++ S++S L + +G +H+Y+ K GL+
Sbjct: 248 TSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLKSGLI 304
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
++ VG++L Y+KCG + + +F + K+ W++MI G+ G ++ LFS+
Sbjct: 305 -LDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSE 363
Query: 523 MLNEEVQPNEVIFTTILSACS 543
ML+E P+E +L+ CS
Sbjct: 364 MLDEGTSPDESTLAAVLTVCS 384
>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
Length = 849
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 197/618 (31%), Positives = 319/618 (51%), Gaps = 31/618 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V YG G VK AR VF S+ +P+ YS+ +++ Y N +K ++E + M +
Sbjct: 122 VVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPN 181
Query: 146 NFVFSKVLKACCELRDIDEGMKVH------CEIVKVGGPDSFVLTGLVDMYAKCRDIGSS 199
+ V+ A EL D DE K+H C++ D ++T L+DMYAKC DI +
Sbjct: 182 AVTLATVIGAVSELGDWDEARKIHARAAATCQLTY----DVVLVTALIDMYAKCGDIFHA 237
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
VFD+ +K++ +MI+ Y+Q + + FNR++ ++ NQ+T L ACA
Sbjct: 238 EVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATN 297
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ H + + + + TAL+ MY +CG++ DAR VFD + ++V+W MI
Sbjct: 298 GVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMI 357
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY Q GY D+AL+L+ + A P+ +T +VL + + +L GR +H + G +
Sbjct: 358 AGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYD 417
Query: 380 D-YTVINALVDMYAKCHVIADARYIFE--TTSEKDVIAWNSIISGLDDN----------- 425
TV++AL+ MY+ C + DA +F T+ VI+W ++++ L N
Sbjct: 418 SSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFR 477
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
V + VT VS I AC+S+GA+ G ++ G L +V +GT+L+N Y KC
Sbjct: 478 KMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLI-DVVLGTSLINLYGKC 536
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G A VF + KN VTW+ ++ G+ S L +M + QPNE+ +L
Sbjct: 537 GRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNML 596
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
CSH G+V + F SM VP+ +HY C+VDLL R+G+LEE F+ + P D
Sbjct: 597 FGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLD 656
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
L+ + L C ++S + G +++L L P A YVL+SN++A+ G V + +L
Sbjct: 657 SVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKL 716
Query: 660 MKQRGLSKSPGCSLVDLD 677
+R + K S ++++
Sbjct: 717 AGERAMKKEQSRSYIEVN 734
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 213/450 (47%), Gaps = 23/450 (5%)
Query: 166 MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++ H K D +L +V+ Y KC + +R VF NV SWT ++A Y QN
Sbjct: 102 IQAHISHSKRFSGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNG 161
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI-GIEINSHLV 284
+ L L +M V N +TL +++ A ++L + + +H + + LV
Sbjct: 162 HHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLV 221
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
TAL+DMY KCG+I A VFD+ + DL AMI Y Q GY A+ F + +
Sbjct: 222 TALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQ 281
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYI 403
PN VT A + A A G + R+ H I L V+N ALV MY++C + DAR +
Sbjct: 282 PNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRV 341
Query: 404 FETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAV 446
F+ K+V+ WN +I+G V PD +T V+V+ +C+ +
Sbjct: 342 FDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHL 401
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD--AMREKNTVTWSAMI 504
G +H + G S++ V +AL+ Y+ CG A VF + ++W+AM+
Sbjct: 402 AAGRDIHKHVVDAG-YDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAML 460
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G+G +LALF M E V+ N V F + + ACS G + EG F + +
Sbjct: 461 TALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVT-GY 519
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ + +++L + GRL+ ALE ++
Sbjct: 520 LIDVVLGTSLINLYGKCGRLDYALEVFHHL 549
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 181/384 (47%), Gaps = 21/384 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+ MY G + +A VFD N D MI Y D V + ++ +
Sbjct: 222 TALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQ 281
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
+ ++ + +AC + H C I+ PD V T LV MY++C + +R+V
Sbjct: 282 PNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRV 341
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD KNVV+W MIAGY Q E L L+ M VE ++IT +++ +C+ L
Sbjct: 342 FDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHL 401
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI--DLVSWTAMIV 320
G+ +H +++ G + + +++AL+ MY CG++ DA VF + + ++SWTAM+
Sbjct: 402 AAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLT 461
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LE 379
T++G AL LF N VT S + A + +G L G + I G L
Sbjct: 462 ALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLI 521
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
D + +L+++Y KC + A +F S K+++ WN+I++ N
Sbjct: 522 DVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMD 581
Query: 426 ---VSPDAVTLVSVISACASLGAV 446
P+ +TL++++ C+ G V
Sbjct: 582 LDGAQPNEMTLLNMLFGCSHNGLV 605
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 148/307 (48%), Gaps = 7/307 (2%)
Query: 55 LLGLCKSTG---SLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L C + G + H I+ L D NT LVSMY G ++ AR VFD MP +
Sbjct: 290 LFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKN 349
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
++ VMI Y + ++ Y M E D F VL++C + G +H
Sbjct: 350 VVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409
Query: 171 EIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDE--TLDKNVVSWTSMIAGYVQNDCA 227
+V G S VL+ L+ MY+ C +G + VF + T +V+SWT+M+ +N
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ L LF +M V+ N +T S + AC+ + AL +G + ++ G I+ L T+L
Sbjct: 470 RSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSL 529
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+++Y KCG + A VF L ++V+W ++ +Q+G + +L + PN
Sbjct: 530 INLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNE 589
Query: 348 VTIASVL 354
+T+ ++L
Sbjct: 590 MTLLNML 596
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 2/182 (1%)
Query: 406 TTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
T S++DV + S + N D V + +S G V ++ A+ + S +
Sbjct: 58 TLSDEDVK--QRLASLEEQNQKSDFVDPAAYVSLLKQAGDVTALKTIQAHISHSKRFSGD 115
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+ ++ Y KCG + AR+VF ++R N +W+ ++ Y G L L M
Sbjct: 116 RLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDL 175
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
V PN V T++ A S G E K + + ++D+ A+ G +
Sbjct: 176 LGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIF 235
Query: 586 EA 587
A
Sbjct: 236 HA 237
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/569 (31%), Positives = 302/569 (53%), Gaps = 33/569 (5%)
Query: 131 VEFYK--CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLV 187
+EF++ C K K+ + + +L+ C + + E +H I+K G D V+T LV
Sbjct: 57 LEFHEALCFIKEEKKIEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLV 116
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
++YAKC +G++R++FD +NVV+WT+++ GYVQN + +F M E +
Sbjct: 117 NVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNY 176
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TLG + AC+ + ++ GK LH +++K ++ + + AL +Y K G++ + +VF +
Sbjct: 177 TLGIALNACSAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSI 236
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
+++SWTA+I ++G L+ F + D PN T+ +VLS L +GR
Sbjct: 237 GEKNVISWTAVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGR 296
Query: 368 MVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
+VHSL I+LG + + + N+++ +Y KC + +A+ +F +++ WN++ISG
Sbjct: 297 LVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAM 356
Query: 422 --LDDNVS---------------------PDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
D+ S PD TL SV++ C+ L A+ G LHA + K
Sbjct: 357 DLAKDDFSAQRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIK 416
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G LS +V VGTAL+N Y+KCG A F M + ++W+ MI G G +L
Sbjct: 417 SGYLS-DVVVGTALVNMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQ 475
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF DM V+PN++ F +L+AC H+GMV E F M ++++ P M HY C++ +
Sbjct: 476 LFEDMRLAGVRPNQITFVGVLAACCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMF 535
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
+ RL+EA + + M EP ++ + GC + +LG +++L+L YV
Sbjct: 536 VKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYV 595
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSK 667
+ N+Y S RW V++VR+LMK+ L K
Sbjct: 596 TLLNMYISAKRWQDVSRVRKLMKEEKLGK 624
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/495 (27%), Positives = 230/495 (46%), Gaps = 51/495 (10%)
Query: 1 MKLISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSL------------- 47
+KL L++H S + P + SY Q++ +LD + L
Sbjct: 13 LKLEPELRKHPSSSSLPTEKSPSTSY--QRSSINTQLDGSLEPIKPLEFHEALCFIKEEK 70
Query: 48 ---PS--IPCLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARS 101
PS +P L S + HA +I G D T LV++Y G + AR
Sbjct: 71 KIEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARK 130
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+FDS+ + ++ ++ Y N ++ ++ M + N+ L AC +
Sbjct: 131 IFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINS 190
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
I G ++H ++K D + L +Y+K + SS VF +KNV+SWT++I+
Sbjct: 191 IKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISA 250
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
+N A GL FN M ++ N+ TL ++++ C AL G+ +H +K+G + N
Sbjct: 251 CGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYN 310
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK---------- 330
+ +++ +Y+KCG++ +A+ +F ++ S +LV+W AMI G+ Q+ K
Sbjct: 311 LRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGI 370
Query: 331 -ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALV 388
AL +F + P+ T++SVL+ ++L L G +H+ I+ G L D V ALV
Sbjct: 371 EALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALV 430
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAV 431
+MY+KC I A F S + +I+W ++I+GL + V P+ +
Sbjct: 431 NMYSKCGSIGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQI 490
Query: 432 TLVSVISACASLGAV 446
T V V++AC G V
Sbjct: 491 TFVGVLAACCHSGMV 505
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 184/548 (33%), Positives = 305/548 (55%), Gaps = 22/548 (4%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
FS++L+ C + R I + ++K G P + LVD KC DI +RQVFD +
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+++V+W S+IA +++ ++E + ++ M V ++ TL S+ A + L + +
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 269 HGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
HG + +G+E+++ V +AL+DMYVK G R+A+ V D + D+V TA+IVGY+Q G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-A 386
+A+K F PN T ASVL + L ++ G+++H L ++ G E +
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPD 429
L+ MY +C ++ D+ +F+ + ++W S+ISGL D++ P+
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+ TL S + C++L + G +H TK G + Y G+ L++ Y KCG + AR+VF
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF-DRDKYAGSGLIDLYGKCGCSDMARLVF 426
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D + E + ++ + MI Y G G +L LF M+N +QPN+V ++L AC+++ +V
Sbjct: 427 DTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVE 486
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG + F S +D K + + HY CMVDLL RAGRLEEA E + I PD+ L+ L
Sbjct: 487 EGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSA 544
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C ++ + ++ E + +K+LE+ P +L+SNLYAS G+W RV +++ MK L K+P
Sbjct: 545 CKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNP 604
Query: 670 GCSLVDLD 677
S V+++
Sbjct: 605 AMSWVEIN 612
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 214/467 (45%), Gaps = 21/467 (4%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
+S +K A ++ G + +KLV G + YAR VFD M ++ +I
Sbjct: 79 RSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIA 138
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD 179
+ + K+ VE Y+ M D + S V KA +L E + H V +G
Sbjct: 139 YLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV 198
Query: 180 S--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
S FV + LVDMY K ++ V D +K+VV T++I GY Q E + F M
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
V+ N+ T S++ +C L+ + GK +HG ++K G E T+LL MY++C +
Sbjct: 259 LVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLV 318
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
D+ VF + + VSWT++I G Q+G + AL F PN T++S L
Sbjct: 319 DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ L GR +H + + G + D + L+D+Y KC AR +F+T SE DVI+ N
Sbjct: 379 SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLN 438
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I N + P+ VT++SV+ AC + V+ G L K
Sbjct: 439 TMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD 498
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++ +N + +++ + G + A M+ + + V W ++
Sbjct: 499 KIMLTNDHYA-CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 195/432 (45%), Gaps = 36/432 (8%)
Query: 3 LISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKST 62
LI+ L +H R K +++ TN P ++ L F +F L L K
Sbjct: 136 LIAYLIKH--RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLS---------LEKEA 184
Query: 63 GSLKAFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW 120
+ H L ++ GL +N + LV MY FG + A+ V D + D +I
Sbjct: 185 ---QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
Y + V+ ++ M + + + ++ VL +C L+DI G +H +VK G +
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 181 FV-LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
T L+ MY +C + S +VF N VSWTS+I+G VQN + L+ F +M
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
++ N TL S + C+ L +G+ +HG + K G + + + + L+D+Y KCG
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
AR VFD L +D++S MI Y Q+G+ +AL LF PN VT+ SVL A
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLAC-- 479
Query: 360 LGNLNMGRMVHS----------LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSE 409
N R+V I L + Y +VD+ + + +A +
Sbjct: 480 ----NNSRLVEEGCELFDSFRKDKIMLTNDHYA---CMVDLLGRAGRLEEAEMLTTEVIN 532
Query: 410 KDVIAWNSIISG 421
D++ W +++S
Sbjct: 533 PDLVLWRTLLSA 544
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 297/546 (54%), Gaps = 18/546 (3%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC-RDIGSSRQVFD 204
F ++ +L+ C + G++ H +K G D FV L+ +Y K ++ +R+VFD
Sbjct: 61 FFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFD 120
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
K+++SWTSMI GYV+ + ++ L LF M +E N TL +++ AC+ L L
Sbjct: 121 GLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRL 180
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK HG ++ G ++N + TAL+DMY + + DA VF EL D + WT++I +T+
Sbjct: 181 GKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTR 240
Query: 325 SGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
+ DKAL F + P+ T +VL+A LG L G+ VH+ I GL +
Sbjct: 241 NDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVF 300
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV-------- 434
V ++LVDMY KC ++ ++ +F+ S K++++W +++ G N ++V +
Sbjct: 301 VESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFREGKKVD 360
Query: 435 -----SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+V+ ACA L AV+ G +H K+ +V +AL++ YAKCG A +F
Sbjct: 361 TYSFGTVLRACAGLAAVRQGKEVHCQYVKR-CCWRDVVTESALVDLYAKCGCIDFAYRIF 419
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
M +N +TW++MI G+ G GG LF +M+ E ++P+ + F +L ACSH G+V
Sbjct: 420 VRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVD 479
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+G K F +M ++ P ++HY CM+DLL RAG LEEA +EN + SL+ L
Sbjct: 480 QGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGA 539
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C E + KK +EL PD YV ++N+Y + GRW ++R LM +RG+ K P
Sbjct: 540 CAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMP 599
Query: 670 GCSLVD 675
G S ++
Sbjct: 600 GTSWIE 605
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 155/548 (28%), Positives = 251/548 (45%), Gaps = 51/548 (9%)
Query: 1 MKLISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELD-----QTFASFHSLPSI----- 50
MKL+ QRH S L+ + N Q+ + F + H L SI
Sbjct: 1 MKLLLSSQRHYSTLASLNLK----TLENPQSKAYKIIQYCKSGSLFEAIHVLNSIDWTRL 56
Query: 51 ---PCL--NLLGLCKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFG-HVKYAR 100
P +LL C S FH+ I GL D+ L+++Y G ++ AR
Sbjct: 57 SNKPFFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEAR 116
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR 160
VFD + D S+ MI Y + K +E + M E + F S V+KAC L
Sbjct: 117 RVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLG 176
Query: 161 DIDEGMKVHCEIVKVGGPD--SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
D+ G H +V V G D + T L+DMY + + + VF E + + WTS+I
Sbjct: 177 DLRLGKCFH-GVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSII 235
Query: 219 AGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
+ + +ND + L F M R+ + + T G+++TAC L L QGK +H ++ G+
Sbjct: 236 SAFTRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGL 295
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
N + ++L+DMY KC + ++ VFD + +LVSWTA++ GY Q+G + +++F +
Sbjct: 296 SGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFRE 355
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI-RLGLEDYTVINALVDMYAKCHV 396
K D + + +VL A A L + G+ VH + R D +ALVD+YAKC
Sbjct: 356 GKKVDTY----SFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGC 411
Query: 397 IADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISA 439
I A IF S +++I WNS+I G +++ + PD ++ V V+ A
Sbjct: 412 IDFAYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFA 471
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR-MVFDAMREKNTV 498
C+ G V G A T+ + + +++ + G + A ++ +A
Sbjct: 472 CSHAGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPS 531
Query: 499 TWSAMIGG 506
W+ ++G
Sbjct: 532 LWTVLLGA 539
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/531 (34%), Positives = 292/531 (54%), Gaps = 22/531 (4%)
Query: 167 KVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H I+ G D+ + L+ Y + +I +R VF++ +++ +W SMI Y +
Sbjct: 3 QIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRT 62
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ E L L+ RM ++ + T + AC+ L L G+ + + G + +V
Sbjct: 63 NYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFVV 122
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+++L++Y K G + A+ VFD++ D+VSWT MI G+ QSG P A+ ++ +
Sbjct: 123 SSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERTE 182
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
+ V + ++ A LG+ G VH +R + D + +L+DMYAK + A +
Sbjct: 183 GDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRV 242
Query: 404 FETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAV 446
FE K VI+W ++ISG N PD V+L+S +SACA +G +
Sbjct: 243 FEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNL 302
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+VG SLH + K+ L GTAL++ YAKCG AR +FD + ++ + W+AMI
Sbjct: 303 KVGKSLHGHIVKRLYLDK--VSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISS 360
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
YG+ GDG +L+LF M + P+ F ++LSACSH+G+V EG F+ + K P
Sbjct: 361 YGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQP 420
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
S KHY CMVDLL+RAG++EEA + +E+M I+P ++++ A L GC + +GE++ KK+
Sbjct: 421 SEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKI 480
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
LE +PD YVLVSN ++ +W R++MK G+ K PG S V+++
Sbjct: 481 LESNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVEVN 531
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 246/464 (53%), Gaps = 23/464 (4%)
Query: 65 LKAFHALLIVDGLTNDKCNT--KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+ HAL++ GL + N+ +L++ YG ++ AR+VF+ MP ++ MI Y
Sbjct: 1 MTQIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYS 60
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
+ +++ Y M + D+ F+ LKAC L D+D G + + V G G D F
Sbjct: 61 RTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVF 120
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V++ ++++YAK + ++ VFD+ + ++VVSWT+MI G+ Q+ + + ++ M++
Sbjct: 121 VVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKER 180
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
EG+ + + L+ AC L G +HG++++ + +++ L T+L+DMY K G + A
Sbjct: 181 TEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELAS 240
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF+ + ++SW A+I G+ Q+G+ +K L + + + F P+ V++ S LSA AQ+G
Sbjct: 241 RVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVG 300
Query: 362 NLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
NL +G+ +H ++ D AL+DMYAKC + AR +F+ +D+I WN++IS
Sbjct: 301 NLKVGKSLHGHIVKRLYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISS 360
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSS-LHAYSTKQGLLS 463
+ N++PD T S++SAC+ G V+ G H K +
Sbjct: 361 YGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQP 420
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMIGG 506
S + +++ ++ G + A + ++M K + W A++ G
Sbjct: 421 SEKHYA-CMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSG 463
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 6/275 (2%)
Query: 53 LNLLGLCKSTGSLK---AFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPN 108
+ L+ C S G K + H ++ + D T L+ MY G ++ A VF+ +P
Sbjct: 189 VGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASRVFEGIPY 248
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
S+ +I + N + M+ + D L AC ++ ++ G +
Sbjct: 249 KSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGNLKVGKSL 308
Query: 169 HCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
H IVK D T L+DMYAKC + +R +FD+ ++++ W +MI+ Y +
Sbjct: 309 HGHIVKRLYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISSYGIHGDGI 368
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTAL 287
E L LF +M+E + + T SL++AC+ + +G+ W H I K I+ + +
Sbjct: 369 EALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQPSEKHYACM 428
Query: 288 LDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVG 321
+D+ + G + +A + + + L W A++ G
Sbjct: 429 VDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSG 463
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 83/183 (45%), Gaps = 6/183 (3%)
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+ +HA GL ++ L+ Y + + AR VF+ M +++ W++MI Y
Sbjct: 2 TQIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSR 61
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
L L+ M++E ++P+ FT L ACS + G + ++ DF + +
Sbjct: 62 TNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMG-EIIWNQAVDFGYGFDVF 120
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR----FDLGEVMIKK 625
+++L A++G++++A + M ++ DV + + G R D+ M K+
Sbjct: 121 VVSSVLNLYAKSGKMDKAKIVFDKM-VKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKE 179
Query: 626 MLE 628
E
Sbjct: 180 RTE 182
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 280/494 (56%), Gaps = 42/494 (8%)
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L + MR+ +E + + S++ AC+++ GK +HG+ +K G+ + +V AL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 290 MYVKCGNIRDARSVFDELCSID----------------------LVSWTAMIVGYTQSGY 327
MY +CG++ AR +FD++ D +VSWTAMI GY +
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
++ +LF + FPN +T+ S++ + +G + +G+ +H+ +R G + A
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPD 429
LVDMY KC I AR IF++ KDV+ W ++IS D+ V P+
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+T+VS++S CA GA+ +G HAY KQG+ +V + TAL++ YAKCGD A+ +F
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGV-EVDVILKTALIDMYAKCGDISGAQRLF 391
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+++ TW+ M+ GYGM G G +L LF++M V+PN++ F L ACSH G+V
Sbjct: 392 SEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVV 451
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG F M DF VP ++HY CMVDLL RAG L+EA + +E+MP+ P+++++GA L
Sbjct: 452 EGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C ++ ++GE+ +++L L P Y VL+SN+YA+ RW V +R+ +K G+ K P
Sbjct: 512 CKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEP 571
Query: 670 GCSLVDLD-IANDF 682
G S ++++ + +DF
Sbjct: 572 GMSSIEVNGLVHDF 585
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 223/454 (49%), Gaps = 51/454 (11%)
Query: 95 HVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLK 154
H R+ F+ F F+ R Y LN Y MRK E D+F+ VLK
Sbjct: 67 HAHITRTHFNHAQQVSFSPFESHPR-YALNT--------YTYMRKLDIEVDSFIIPSVLK 117
Query: 155 ACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV-- 211
AC ++ G ++H VK G D FV+ L+ MY++C + S+R +FD+ +++V
Sbjct: 118 ACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVS 177
Query: 212 --------------------VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
VSWT+MIAGY++ + +EG LF RM E V N IT+ S
Sbjct: 178 WSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLS 237
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ +C + A+ GK LH YIL+ G ++ L TAL+DMY KCG IR AR++FD + + D
Sbjct: 238 LIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKD 297
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+++WTAMI Y Q+ D A +LF + PN +T+ S+LS A G L+MG+ H+
Sbjct: 298 VMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHA 357
Query: 372 LGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----- 425
+ G+E D + AL+DMYAKC I+ A+ +F ++D+ WN +++G +
Sbjct: 358 YIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEK 417
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
V P+ +T + + AC+ G V G L L V ++
Sbjct: 418 ALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMV 477
Query: 474 NFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ + G A + ++M N W AM+
Sbjct: 478 DLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/387 (32%), Positives = 196/387 (50%), Gaps = 35/387 (9%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL- 123
K H + +GL +D L+ MY G + AR +FD M D S+ MIR Y
Sbjct: 129 KEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITL 188
Query: 124 ----------------------NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
NDL + F + + + + +D + S ++ +C +
Sbjct: 189 FYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLII-SCGFVGA 247
Query: 162 IDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+ G ++H I++ G S L T LVDMY KC +I S+R +FD +K+V++WT+MI+
Sbjct: 248 VQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISA 307
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
Y Q +C LF +MR+ V N++T+ SL++ CA AL GKW H YI K G+E++
Sbjct: 308 YAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVD 367
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
L TAL+DMY KCG+I A+ +F E D+ +W M+ GY GY +KALKLFT+ +
Sbjct: 368 VILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMET 427
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCH 395
PN +T L A + G + G +M+H G+ +E Y +VD+ +
Sbjct: 428 LGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHY---GCMVDLLGRAG 484
Query: 396 VIADARYIFETTSEKDVIA-WNSIISG 421
++ +A + E+ IA W ++++
Sbjct: 485 LLDEAYKMIESMPVTPNIAIWGAMLAA 511
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 168/343 (48%), Gaps = 46/343 (13%)
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVIN 385
+P AL +T + D + I SVL A +Q+ MG+ +H ++ GL D V+N
Sbjct: 89 HPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVN 148
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------------------ 421
AL+ MY++C + AR +F+ SE+DV++W+++I
Sbjct: 149 ALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYI 208
Query: 422 ---------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
+++NV P+ +T++S+I +C +GAVQ+G LHAY + G ++
Sbjct: 209 RCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNG-FGMSL 267
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ TAL++ Y KCG+ +SAR +FD+M+ K+ +TW+AMI Y + LF M +
Sbjct: 268 ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDN 327
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
V+PNE+ ++LS C+ G + G K F++ + ++D+ A+ G +
Sbjct: 328 GVRPNELTMVSLLSLCAVNGALDMG-KWFHAYIDKQGVEVDVILKTALIDMYAKCGDISG 386
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
A I+ D+ + + G G++ GE +K E+
Sbjct: 387 AQRLFSE-AIDRDICTWNVMMAGYGMHG---YGEKALKLFTEM 425
>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1005
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 198/611 (32%), Positives = 323/611 (52%), Gaps = 20/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFD-SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
LVSMY H+ A+ +FD S D + ++ Y + + ++ ++ M+
Sbjct: 203 LVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPAS 262
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVF 203
+++ L AC G ++H ++K + +V L+ MYA+C + + ++
Sbjct: 263 NSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRIL 322
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ +VV+W S+I GYVQN +E L F M + ++++L S++ A +L L
Sbjct: 323 RLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLL 382
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G LH Y++K G + N + L+DMY KC F + DL+SWT +I GY
Sbjct: 383 AGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYA 442
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
+ +AL+LF D + + + S+L A + L ++ + + +H +R GL D +
Sbjct: 443 LNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVI 502
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS--GLDDNVS-------------- 427
N LVD+Y KC + A +FE+ KDV++W S+IS L+ N +
Sbjct: 503 QNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENEAVELFRRMAETGL 562
Query: 428 -PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D+V L+ ++SA ASL A++ G +H Y ++G + A+++ YA CGD QSA+
Sbjct: 563 LADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGS-IAVAVVDMYACCGDLQSAK 621
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD + K + +++MI YGM G G S+ LF+ M +E V P+ + F +L ACSH G
Sbjct: 622 AVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHISFLALLYACSHAG 681
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
++ EG + M ++K P +HYVC+VD+L RA + EA EF++ M EP ++ A
Sbjct: 682 LLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTTEVWCAL 741
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C +S ++GE+ +++LEL P VLVSN++A GRW V +VR MK G+
Sbjct: 742 LAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGME 801
Query: 667 KSPGCSLVDLD 677
K PGCS +++D
Sbjct: 802 KHPGCSWIEMD 812
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 154/535 (28%), Positives = 274/535 (51%), Gaps = 29/535 (5%)
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VFD M + +++ +I Y N + Y+ MR D + F +LKAC +LRD
Sbjct: 118 VFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRD 177
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-NVVSWTSMIA 219
I G ++HC +VK+G F++ LV MYAK + +++++FD + +K + V W S+++
Sbjct: 178 IRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILS 237
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
Y + + E L LF M+ N T+ S +TAC GK +H +LK
Sbjct: 238 SYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSF 297
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
++ AL+ MY +CG + +A + + + D+V+W ++I GY Q+ +AL+ F D
Sbjct: 298 EVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMI 357
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIA 398
A P+ V++ SV++AS +L NL G +H+ I+ G + ++ N L+DMY+KC++
Sbjct: 358 AAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTC 417
Query: 399 DARYIFETTSEKDVIAWNSIISG--LDD---------------NVSPDAVTLVSVISACA 441
F EKD+I+W +II+G L+D + D + L S++ AC+
Sbjct: 418 YMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACS 477
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
L ++ + +H + ++GL+ + + L++ Y KC + A VF++++ K+ V+W+
Sbjct: 478 VLKSMLIVKEIHCHILRKGLI--DTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWT 535
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCR 560
+MI + G+ ++ LF M + + V ILSA + + +G + Y + +
Sbjct: 536 SMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRK 595
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEA---LEFMENMPIEPDVSLFGAF-LHGCG 611
F S+ V +VD+ A G L+ A + +E + S+ A+ +HGCG
Sbjct: 596 GFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCG 648
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/410 (30%), Positives = 200/410 (48%), Gaps = 31/410 (7%)
Query: 159 LRDIDEGMKVHCEIVKVGGPDSFV--LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
L D G+ + + V G +S + L+++ K R + S +VFDE D+ +W +
Sbjct: 74 LASFDGGLNEAFQRLDVNGNNSPIEAYAYLLELCGKSRAL-SQEKVFDEMRDRTAFAWNA 132
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS---LVTACAKLRALHQGKWLHGYIL 273
+I YV N L ++ MR VEG + L S L+ AC KLR + G LH ++
Sbjct: 133 LIGAYVSNGEPASALFIYRNMR---VEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLV 189
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-DLVSWTAMIVGYTQSGYPDKAL 332
K+G +V AL+ MY K ++ A+ +FD D V W +++ Y+ SG + L
Sbjct: 190 KLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETL 249
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL--GLEDYTVINALVDM 390
+LF + + N TI S L+A +G+ +H+ ++ E Y V NAL+ M
Sbjct: 250 QLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVY-VCNALIAM 308
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV-----------------SPDAVTL 433
YA+C + +A I + DV+ WNS+I G N+ PD V+L
Sbjct: 309 YARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSL 368
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
SVI+A L + G LHAY K G SN+ VG L++ Y+KC F M
Sbjct: 369 TSVIAASGRLSNLLAGMELHAYVIKHG-WDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMH 427
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
EK+ ++W+ +I GY + +L LF D+ + ++ +E++ +IL ACS
Sbjct: 428 EKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACS 477
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 9/212 (4%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
KS +K H ++ GL + +LV +YG ++ YA VF+S+ D S+ MI
Sbjct: 480 KSMLIVKEIHCHILRKGLIDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMIS 539
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD 179
LN + VE ++ M + D+ +L A L + +G ++H +++ G
Sbjct: 540 SSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKG--- 596
Query: 180 SFVLTG-----LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
F L G +VDMYA C D+ S++ VFD K ++ +TSMI Y + C + + LF
Sbjct: 597 -FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELF 655
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
N+MR V + I+ +L+ AC+ L +G+
Sbjct: 656 NKMRHENVSPDHISFLALLYACSHAGLLDEGR 687
>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
Length = 941
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 320/628 (50%), Gaps = 21/628 (3%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP--DFYSFQVMIRWYFLND 125
H L + GL L+ MY G + A VF+ + D S+ ++ N
Sbjct: 187 HGLAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNG 246
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG 185
+ + ++ M+ +++ VL+ C EL + G ++H ++K G +
Sbjct: 247 RTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNA 306
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ MYAK + S+ +VF + +K+ +SW SM++ YVQN E + F M + + +
Sbjct: 307 LLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPD 366
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+ SL +A L L+ G+ H Y +K + + + L+DMY+KCG+I + VF+
Sbjct: 367 HACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFE 426
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ D +SWT ++ + QS +AL++ + + + + I S+L L ++++
Sbjct: 427 SMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISL 486
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ VH IR GL D + N L+D+Y +C + +F+ +KD+++W S+I+ +N
Sbjct: 487 LKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNN 546
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ PD+V LVS++ A A L ++ G +H + ++ V
Sbjct: 547 GRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVV 606
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
++L++ Y+ CG A VF+ + K+ V W+AMI GM G G ++ LF ML +
Sbjct: 607 -SSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGL 665
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
P+ V F +L ACSH+ +V EG M ++ P +HY C+VD+L R+G+ EEA
Sbjct: 666 TPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAY 725
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF++ MP++P +++ A L C ++ + L V K+LEL PD Y+LVSN++A G
Sbjct: 726 EFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMG 785
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W + R M +RGL K+P CS +++
Sbjct: 786 KWNNAKETRTRMAERGLRKNPACSWIEI 813
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 175/611 (28%), Positives = 293/611 (47%), Gaps = 40/611 (6%)
Query: 66 KAFHALLIVDGLTNDKCN----TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
+ HA + G N+ + TKLV MYG G V AR +F+ MP +S+ ++ Y
Sbjct: 77 RQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAY 136
Query: 122 FLNDLYKDIVEFYKCMRKRL---KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
+ + + Y MR D + VLKAC D G +VH VKVG
Sbjct: 137 LSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLD 196
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
+ V L+ MYAKC + S+ +VF+ + ++V SW S+++G VQN E L LF
Sbjct: 197 KSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFR 256
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
M+ N T +++ CA+L L G+ LH +LK G E+N ALL MY K G
Sbjct: 257 GMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQ-CNALLVMYAKYG 315
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+ A VF ++ D +SW +M+ Y Q+ + +A+ F + F P+H + S+ S
Sbjct: 316 RVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSS 375
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A L LN GR H+ I+ L D V N L+DMY KC I + +FE+ +D I+
Sbjct: 376 ALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHIS 435
Query: 415 WNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
W +I++ + + D++ + S++ C L ++ + +H Y+
Sbjct: 436 WTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAI 495
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
+ GLL ++ + L++ Y +CG+ + +F + +K+ V+W++MI G G++
Sbjct: 496 RNGLL--DLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAV 553
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVD 576
LF++M +QP+ V +IL A + + +G + + + R+F + +VD
Sbjct: 554 FLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPV--VSSLVD 611
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKA 634
+ + G + A+ E + DV L+ A ++ G++ + K+ML+ L PD
Sbjct: 612 MYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHV 670
Query: 635 CYYVLVSNLYA 645
+ L LYA
Sbjct: 671 SFLAL---LYA 678
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 203/405 (50%), Gaps = 27/405 (6%)
Query: 164 EGMKVHCEIVKVGG----PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
EG +VH V G D F+ T LV MY +C + +R++F+ + V SW +++
Sbjct: 75 EGRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVG 134
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQ---ITLGSLVTACAKLRALHQGKWLHGYILKIG 276
Y+ + A E + ++ MR G+ TL S++ AC G +HG +K+G
Sbjct: 135 AYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVG 194
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELC--SIDLVSWTAMIVGYTQSGYPDKALKL 334
++ ++ + AL+ MY KCG + A VF+ L + D+ SW +++ G Q+G +AL L
Sbjct: 195 LDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALAL 254
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKC 394
F + A F N T +VL A+LG L++GR +H+ ++ G E NAL+ MYAK
Sbjct: 255 FRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNIQCNALLVMYAKY 314
Query: 395 HVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVI 437
+ A +F +EKD I+WNS++S L PD +VS+
Sbjct: 315 GRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLS 374
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
SA L + G HAY+ KQ L +++ VG L++ Y KCG + + VF++M ++
Sbjct: 375 SALGHLSRLNNGREFHAYAIKQ-RLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDH 433
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
++W+ ++ + +L + ++ E + + ++ +IL C
Sbjct: 434 ISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETC 478
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 1/208 (0%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
KS LK H I +GL + +L+ +YG G ++ ++F + D S+ MI
Sbjct: 482 KSISLLKQVHCYAIRNGLLDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMIN 541
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP- 178
N V + M+K + D+ +L A L + +G +VH +++ P
Sbjct: 542 CCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPI 601
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
+ V++ LVDMY+ C + + +VF+ K+VV WT+MI + ++ + LF RM
Sbjct: 602 EGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRML 661
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGK 266
+ + + ++ +L+ AC+ + + +GK
Sbjct: 662 QTGLTPDHVSFLALLYACSHSKLVEEGK 689
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 13/171 (7%)
Query: 449 GSSLHAYSTKQGLLSSN--VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
G +HA++ G L+ + ++ T L+ Y +CG AR +F+ M + +W+A++G
Sbjct: 76 GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135
Query: 507 YGMQGDGGGSLALFSDMLNEEV---QPNEVIFTTILSACSHTGMVGEGWKC---FYSMCR 560
Y G G ++ ++ M P+ ++L AC G G+G +C + +
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKAC---GAEGDG-RCGGEVHGLAV 191
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP-DVSLFGAFLHGC 610
S ++ + A+ G L+ AL E + + DV+ + + + GC
Sbjct: 192 KVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGC 242
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 282/498 (56%), Gaps = 21/498 (4%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R VFDE D++VV+WT+M++GY N C L LF RM V N+ TL S++TAC
Sbjct: 22 ARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVLTACRG 81
Query: 259 LRALH--QGKWLHGYILKIGIEINSHLVTALLDMYVKCGN---IRDARSVFDELCS-IDL 312
A + LH ++ G++ ++V AL++ Y C + ++R +FD L S
Sbjct: 82 GAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLFDALGSGRTA 141
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
SWT+M+ GY++ G L+LF + T + L A A + NL +G+ +H L
Sbjct: 142 ASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQLHVL 201
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD------- 424
+R + TV N+L+DMY C + DAR +F+ E++++ WN++I+
Sbjct: 202 CLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQCNHLMAL 261
Query: 425 ------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
N+ P+ TL S+ SACA L +++ G +H + ++ ++ + AL++ Y+K
Sbjct: 262 QLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNY-GKDLQMCNALVDMYSK 320
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG +A+ +F+ M K+ ++W++MI GYGM G S+ LF+ M++ V P+ V+F +
Sbjct: 321 CGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVHPDHVVFLGL 380
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
+ AC+H G+V EGW F SM ++ P+ + Y C+ +LLARAGRL EA + + MP P
Sbjct: 381 ICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFDLIHRMPFAP 440
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
D +++GA L C ++ +LG + +K++E++PD+A YVL++N+YA+ +W R
Sbjct: 441 DETVWGALLGACKMHKNVELGRLAARKIIEINPDRAKTYVLLANIYAAGNKWGEYADTRR 500
Query: 659 LMKQRGLSKSPGCSLVDL 676
L++ G K G S +D+
Sbjct: 501 LLRGIGSRKEAGTSWIDV 518
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 216/458 (47%), Gaps = 40/458 (8%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+ + G +++AR+VFD MP+ D ++ M+ Y N + ++ ++ M
Sbjct: 7 TTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGVG 66
Query: 144 HDNFVFSKVLKACCELRDIDEGMK---VHCEIVKVGGPD-SFVLTGLVDMYAKCRD---I 196
+ F S VL A C D G + +H V+ G +V+ L++ YA C + +
Sbjct: 67 PNEFTLSSVLTA-CRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVGV 125
Query: 197 GSSRQVFDE-TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
SR++FD + SWTSM+AGY + Q GL LF M + +E + T + A
Sbjct: 126 EESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHA 185
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA + L G+ LH L+ N + +L+DMY C N+ DAR +FDE+ +LV+W
Sbjct: 186 CASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTW 245
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI Y+Q + AL+L + + PN T+ S+ SA A L +L G+ VH +R
Sbjct: 246 NTMIAWYSQCNHL-MALQLLREM---NLQPNCFTLTSITSACAGLASLRFGQQVHGAALR 301
Query: 376 LGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
+D + NALVDMY+KC IA+A+ +F KD ++W S+I+G N
Sbjct: 302 RNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQL 361
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
V PD V + +I AC G V G + T + L N + + N A
Sbjct: 362 FTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLA 421
Query: 478 KCGDAQSA-----RMVFDAMREKNTVTWSAMIGGYGMQ 510
+ G + A RM F + W A++G M
Sbjct: 422 RAGRLREAFDLIHRMPF----APDETVWGALLGACKMH 455
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 183/384 (47%), Gaps = 35/384 (9%)
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
T L+ G +R AR+VFDE+ D+V+WTAM+ GY +G AL LF A
Sbjct: 6 ATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGV 65
Query: 344 FPNHVTIASVLSASAQLGNLNMG---RMVHSLGIRLGLEDYT-VINALVDMYAKCHV--- 396
PN T++SVL+A + G + G +H++ +R G++ V+NAL++ YA C
Sbjct: 66 GPNEFTLSSVLTA-CRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVG 124
Query: 397 IADARYIFET-TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVIS 438
+ ++R +F+ S + +W S+++G + D + T +
Sbjct: 125 VEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALH 184
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
ACAS+ + VG LH ++ ++N+ V +L++ Y C + AR +FD + E+N V
Sbjct: 185 ACASIANLCVGQQLHVLCLRKA-FNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLV 243
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
TW+ MI Y Q + +L L +M +QPN T+I SAC+ + G + +
Sbjct: 244 TWNTMIAWYS-QCNHLMALQLLREM---NLQPNCFTLTSITSACAGLASLRFGQQVHGAA 299
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
R + ++ +VD+ ++ G + A + M + +S + + + G G+ +
Sbjct: 300 LRR-NYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLS-WTSMITGYGMNGYANE 357
Query: 619 GEVMIKKMLE--LHPDKACYYVLV 640
+ M+ +HPD + L+
Sbjct: 358 SIQLFTSMIHAGVHPDHVVFLGLI 381
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 144/319 (45%), Gaps = 24/319 (7%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LN 124
KAF+A L V L+ MY S ++ AR +FD +P + ++ MI WY N
Sbjct: 205 KAFNANLTVA--------NSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQCN 256
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
L + +R+ + + F + + AC L + G +VH ++ G D +
Sbjct: 257 HLMA-----LQLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMC 311
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
LVDMY+KC I +++++F+ K+ +SWTSMI GY N A E + LF M V
Sbjct: 312 NALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVH 371
Query: 244 GNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + L+ AC + +G + + ++ N + + ++ + G +R+A
Sbjct: 372 PDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFD 431
Query: 303 VFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN----HVTIASVLSAS 357
+ + + D W A++ + + L +K + P+ +V +A++ +A
Sbjct: 432 LIHRMPFAPDETVWGALLGACKM--HKNVELGRLAARKIIEINPDRAKTYVLLANIYAAG 489
Query: 358 AQLGNL-NMGRMVHSLGIR 375
+ G + R++ +G R
Sbjct: 490 NKWGEYADTRRLLRGIGSR 508
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/598 (32%), Positives = 307/598 (51%), Gaps = 29/598 (4%)
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP + S+ +I Y Y +++ +K R D F FS L C D+ G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 166 MKVHCEIV--KVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H I +GGP + L+DMY KC I +R VF+ + + VSW S+IAGYV+
Sbjct: 61 RLIHALITVSGLGGP-VLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 119
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK--LRALHQGKWLHGYILKIGIEINS 281
E L L +M + N LGS + AC ++ GK LHG +K+G++++
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 179
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ-----SGYPDKALKLFT 336
+ TALLD Y K G++ DA +F + ++V + AMI G+ Q + ++A+ LF
Sbjct: 180 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 239
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ + P+ T +S+L A + + G+ +H+ + L+ D + NALV++Y+
Sbjct: 240 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 299
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVIS 438
I D F +T + DV++W S+I G N PD T+ ++S
Sbjct: 300 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
ACA+L AV+ G +HAY+ K G+ + + + + + YAKCGD SA M F + + V
Sbjct: 360 ACANLAAVKSGEQIHAYAIKTGIGNFTI-IQNSQICMYAKCGDIDSANMTFKETKNPDIV 418
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
+WS MI G ++ LF M + PN + F +L ACSH G+V EG + F M
Sbjct: 419 SWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIM 478
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
+D P++KH C+VDLL RAGRL EA F+ + E D ++ + L C ++ D
Sbjct: 479 KKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDT 538
Query: 619 GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
G+ + ++++EL P+ A YVL+ N+Y G + ++R LMK RG+ K PG S +++
Sbjct: 539 GKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEV 596
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 136/482 (28%), Positives = 237/482 (49%), Gaps = 31/482 (6%)
Query: 54 NLLGLCKSTGSLKA---FHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNP 109
N L +C T L+ HAL+ V GL T L+ MY G + +AR VF+S
Sbjct: 46 NALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL 105
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE--LRDIDEGMK 167
D S+ +I Y +++ M + +++ LKAC I+ G
Sbjct: 106 DSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKM 165
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ--- 223
+H VK+G D V T L+D YAK D+ + ++F D NVV + +MIAG++Q
Sbjct: 166 LHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMET 225
Query: 224 --NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
++ A E + LF M+ ++ ++ T S++ AC+ + A GK +H I K ++ +
Sbjct: 226 MADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDE 285
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ AL+++Y G+I D F +D+VSWT++IVG+ Q+G + L LF + ++
Sbjct: 286 FIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFS 345
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADA 400
P+ TI+ +LSA A L + G +H+ I+ G+ ++T+I N+ + MYAKC I A
Sbjct: 346 GRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA 405
Query: 401 RYIFETTSEKDVIAWNSIIS----------GLD-------DNVSPDAVTLVSVISACASL 443
F+ T D+++W+ +IS +D ++P+ +T + V+ AC+
Sbjct: 406 NMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHG 465
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD-AQSARMVFDAMREKNTVTWSA 502
G V+ G K ++ NV +++ + G A++ + D+ E + V W +
Sbjct: 466 GLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRS 525
Query: 503 MI 504
++
Sbjct: 526 LL 527
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 9/174 (5%)
Query: 55 LLGLCKSTGSLKA---FHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C + ++K+ HA I G+ N + MY G + A F NPD
Sbjct: 357 MLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPD 416
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ VMI + K+ V+ ++ M+ ++ F VL AC ++EG++ +
Sbjct: 417 IVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLR-YF 475
Query: 171 EIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQ-VFDETLDKNVVSWTSMIAG 220
EI+K P+ +VD+ + + + + D + + V W S+++
Sbjct: 476 EIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 529
>gi|357162206|ref|XP_003579338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Brachypodium distachyon]
Length = 558
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 304/558 (54%), Gaps = 23/558 (4%)
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV-KVGGPDSFVLTGLVDMYAKCRD 195
+R D + +L++C + G VH +I+ PD + T LV YAK D
Sbjct: 4 VRGAATSADPAFYYSLLQSC--MSCFRRGRSVHHQIIASAAPPDLHMSTKLVIFYAKHGD 61
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+ ++R+VFD ++VVSWT+M++GY +N +E L LF M V NQ T GS+ +A
Sbjct: 62 VAAARKVFDGMPHRSVVSWTAMVSGYSRNGQTREALDLFTLMLASGVRPNQFTYGSVASA 121
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CA + G+ +H + K + + +AL+DM+++CG++ DA +F E+ D+V+W
Sbjct: 122 CAGAGCVRSGEQVHACVAKGRFVGDVFVQSALMDMHLRCGSVVDAMQLFAEMERKDVVAW 181
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A++ G + AL L P+H T S L A + L ++H+ I+
Sbjct: 182 NALLRGLVERAQYGDALGLLPSMLRGAMLPDHFTFGSALKACGAVSVLANVELIHTCIIK 241
Query: 376 LGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--LDDNVSPDAVT 432
LG + VI +++D YAKC ++ AR I+++ E D+++ ++ISG +D N S DA+
Sbjct: 242 LGYWGEKVVIGSIIDAYAKCRGLSSARLIYDSICEPDLVSSTALISGYSMDRNHSEDAME 301
Query: 433 LVSVI----------------SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
L I CA++ +++ G+ +HAY K+ ++ +V + A+++ Y
Sbjct: 302 LFCKIHRKGLRIDGVLLSSLLGLCANVASLRFGTQIHAYMCKRQPMT-DVALDNAVVDMY 360
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AK G+ AR FD M +N V+W+++I G G G +++LF M+ + V+PN+V F
Sbjct: 361 AKAGEFADARRAFDEMPYRNVVSWTSLITACGKNGFGEDAVSLFDRMVEDGVKPNDVTFL 420
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
++LSAC H+G+ +G + F SM + P +HY +DLLAR G+L++A + ++N+ I
Sbjct: 421 SLLSACGHSGLTSKGMEYFTSMMSKYGIDPRAEHYSSAIDLLARGGQLKDAWKLVQNIDI 480
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
EP+ S+FGA L C + LGE K + + P+ + +Y +++N+YA W +
Sbjct: 481 EPNSSMFGAMLGACKTHGSMPLGETAAKNLFTIAPESSVHYAVLANMYAESSLWEDAQRT 540
Query: 657 RELMKQRGLSKSPGCSLV 674
R+LM + K GCS++
Sbjct: 541 RKLMAETSGGKVAGCSVI 558
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 143/546 (26%), Positives = 244/546 (44%), Gaps = 63/546 (11%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
++ H +I D +TKLV Y G V AR VFD MP+ S+ M+ Y N
Sbjct: 31 RSVHHQIIASAAPPDLHMSTKLVIFYAKHGDVAAARKVFDGMPHRSVVSWTAMVSGYSRN 90
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK---VGGPDSF 181
++ ++ + M + F + V AC + G +VH + K VG D F
Sbjct: 91 GQTREALDLFTLMLASGVRPNQFTYGSVASACAGAGCVRSGEQVHACVAKGRFVG--DVF 148
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L+DM+ +C + + Q+F E K+VV+W +++ G V+ + L L M G
Sbjct: 149 VQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALLRGLVERAQYGDALGLLPSMLRGA 208
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T GS + AC + L + +H I+K+G ++ +++D Y KC + AR
Sbjct: 209 MLPDHFTFGSALKACGAVSVLANVELIHTCIIKLGYWGEKVVIGSIIDAYAKCRGLSSAR 268
Query: 302 SVFDELCSIDLVSWTAMIVGYT-QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
++D +C DLVS TA+I GY+ + + A++LF + V ++S+L A +
Sbjct: 269 LIYDSICEPDLVSSTALISGYSMDRNHSEDAMELFCKIHRKGLRIDGVLLSSLLGLCANV 328
Query: 361 GNLNMGRMVHS-LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+L G +H+ + R + D + NA+VDMYAK ADAR F+ ++V++W S+I
Sbjct: 329 ASLRFGTQIHAYMCKRQPMTDVALDNAVVDMYAKAGEFADARRAFDEMPYRNVVSWTSLI 388
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+ ++D V P+ VT +S++SAC GL
Sbjct: 389 TACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACG----------------HSGLT 432
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S + T++++ Y A+ D + GG +
Sbjct: 433 SKGMEYFTSMMSKYGIDPRAEHYSSAIDLLAR------------------GGQLKDAWKL 474
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARA 581
+ N +++PN +F +L AC G + G ++ F P S HY + ++ A +
Sbjct: 475 VQNIDIEPNSSMFGAMLGACKTHGSMPLGETAAKNL---FTIAPESSVHYAVLANMYAES 531
Query: 582 GRLEEA 587
E+A
Sbjct: 532 SLWEDA 537
>gi|302803540|ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
gi|300148766|gb|EFJ15424.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
Length = 506
Score = 322 bits (826), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 182/491 (37%), Positives = 271/491 (55%), Gaps = 20/491 (4%)
Query: 189 MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF--VEGNQ 246
M+AKC + SR+VFD+ K+V+ W SMI Y Q+ +E + LF M VE N
Sbjct: 1 MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNA 60
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
IT +++ AC+ + AL QGK +H ++ G + ++ +L++MY KCG+I +AR VFD
Sbjct: 61 ITYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDG 120
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ +VSWT +I Y + G+P +AL L+ PN +T ASVLSA + LG L G
Sbjct: 121 MKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEG 180
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD- 424
+ VH+ G + D V NALV +Y KC + AR +F+ ++V++W ++IS
Sbjct: 181 KAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHH 240
Query: 425 -------------NVSPDAVTLVSVISACASLGAVQVGSSLHA--YSTKQGLLSSNVYVG 469
+V+P+AVTL SV+SACASLG + G ++H ST GL + V +
Sbjct: 241 RHSEEAIQLYKAMDVAPNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLATDEV-LQ 299
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
ALLN YAKCGD +AR +FDAM ++T++WS +I Y G GG ++ + M E VQ
Sbjct: 300 NALLNMYAKCGDGDAARKIFDAMAVRDTMSWSTLIAAYTQHGRGGEAVEMCRSMELEGVQ 359
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE 589
+ I+ T+L+ACS G++ F + RD ++ YVCM +L RAGRL EA E
Sbjct: 360 ASSFIYGTVLTACSQAGLLESARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEE 419
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
+ MP E + + L C ++ + G + + + L P YVL+SN+Y + GR
Sbjct: 420 LLAVMPFEAEFVAWMGLLAACKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGR 479
Query: 650 WIRVNQVRELM 660
+VR M
Sbjct: 480 QEEAARVRRKM 490
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 163/525 (31%), Positives = 259/525 (49%), Gaps = 54/525 (10%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK--EHDN 146
M+ G +K +R VFD D + MI Y + ++ +E +K M E +
Sbjct: 1 MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNA 60
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDE 205
++ VL AC + +++G +VH ++V G D+ LV+MYAKC I +R+VFD
Sbjct: 61 ITYTTVLAACSAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDG 120
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
+ VVSWT +I+ YV+ +E L L+ +M VE N IT S+++AC+ L AL +G
Sbjct: 121 MKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEG 180
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
K +H + G + + + AL+ +Y KCG++ AR VFD + ++VSWTAMI Y
Sbjct: 181 KAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHH 240
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS--LGIRLGLE-DYT 382
+ ++A++L+ K D PN VT+ASVLSA A LGN GR VH GL D
Sbjct: 241 RHSEEAIQLY---KAMDVAPNAVTLASVLSACASLGNAEEGRAVHEKLASTTTGLATDEV 297
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-VSPDAVTLVSVISACA 441
+ NAL++MYAKC AR IF+ + +D ++W+++I+ + +AV + C
Sbjct: 298 LQNALLNMYAKCGDGDAARKIFDAMAVRDTMSWSTLIAAYTQHGRGGEAVEM------CR 351
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM--------R 493
S+ +G+ +S+ GT +L ++ G +SAR F + +
Sbjct: 352 SM-------------ELEGVQASSFIYGT-VLTACSQAGLLESARHYFGCLTRDCGAPAK 397
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT---ILSACSHTGMVGE 550
++ V + ++G G LA ++L V P E F +L+AC V
Sbjct: 398 LEDYVCMATVLG-------RAGRLAEAEELL--AVMPFEAEFVAWMGLLAACKAHNDVER 448
Query: 551 GWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEEALEFMENM 594
G + + F+ P + YV + ++ AGR EEA M
Sbjct: 449 GARVAEVL---FRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKM 490
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 194/423 (45%), Gaps = 30/423 (7%)
Query: 12 SRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSL---KAF 68
S++ P+ + F +P T+ + +L C + +L K
Sbjct: 34 SQSGHPREAIELFKSMGSSSPPVEPNAITYTT-----------VLAACSAVEALEQGKEV 82
Query: 69 HALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H ++ G D LV+MY G + AR VFD M S+ +I Y
Sbjct: 83 HRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHP 142
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++ ++ Y+ M E + F+ VL AC L ++EG VH ++ G PD V L
Sbjct: 143 REALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANAL 202
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
V +Y KC + S+R+VFD +NVVSWT+MI+ Y + ++E + L+ M V N
Sbjct: 203 VSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISSYAHHRHSEEAIQLYKAMD---VAPNA 259
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILK--IGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+TL S+++ACA L +G+ +H + G+ + L ALL+MY KCG+ AR +F
Sbjct: 260 VTLASVLSACASLGNAEEGRAVHEKLASTTTGLATDEVLQNALLNMYAKCGDGDAARKIF 319
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + D +SW+ +I YTQ G +A+++ + + +VL+A +Q G L
Sbjct: 320 DAMAVRDTMSWSTLIAAYTQHGRGGEAVEMCRSMELEGVQASSFIYGTVLTACSQAGLLE 379
Query: 365 MGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSI 418
R + G LEDY + ++ + +A+A + E + +AW +
Sbjct: 380 SARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGR---LAEAEELLAVMPFEAEFVAWMGL 436
Query: 419 ISG 421
++
Sbjct: 437 LAA 439
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 307/575 (53%), Gaps = 51/575 (8%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
+L+ ++ + ++H +++K L+ L+ +Y+ + S ++F+
Sbjct: 12 LLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPA 71
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
++W S+I Y + + L F M + + S++ +CA L L+ G+ LHGY
Sbjct: 72 LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131
Query: 272 ILKIGIEINSHLVTALLDMYVK-------------CGNIRD------------------- 299
I+++G++ + + AL++MY K G + D
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
R +F+ + DLVSW +I G ++G ++ L++ + A+ P+ T++SVL A+
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+++ G+ +H IR GL+ D V ++L+DMYAKC +AD+ +F +E+D I+WNSI
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I+G N + P + + S++ ACA L + +G LH Y T+ G
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG- 370
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
N+++ ++L++ YAKCG+ ++A+ +FD MR ++ V+W+AMI G + G ++ LF
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFE 430
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
M E ++PN V F +L+ACSH G+V E WK F SM RDF P ++HY + DLL RA
Sbjct: 431 QMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRA 490
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
GRLEEA +F+ M I P S++ L C ++ D+ E + ++LE+ P+ Y+L++
Sbjct: 491 GRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLA 550
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
N+Y++ RW + R M++ G+ K+P CS +++
Sbjct: 551 NIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 585
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 158/295 (53%), Gaps = 6/295 (2%)
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
R +F+ MP D S+ +I N LY++ + + M + D+F S VL E
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAEN 252
Query: 160 RDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
DI G ++H C I + D +V + L+DMYAKC + S +VF +++ +SW S+I
Sbjct: 253 VDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSII 312
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
AG VQN EGL F +M ++ + S++ ACA L LH GK LHGYI + G +
Sbjct: 313 AGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFD 372
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
N + ++L+DMY KCGNIR A+ +FD + D+VSWTAMI+G G A++LF
Sbjct: 373 ENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQM 432
Query: 339 KWADFFPNHVTIASVLSASAQLGNLN-----MGRMVHSLGIRLGLEDYTVINALV 388
+ PNHV +VL+A + G ++ M GI G+E Y ++ L+
Sbjct: 433 ETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLL 487
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 194/396 (48%), Gaps = 51/396 (12%)
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+F+++ P +++ +IR Y + L + + M D+ VF VLK+C L D
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS--------------------- 199
++ G +H I++VG D + L++MY+K R + S
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181
Query: 200 -----------RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT 248
R++F+ +K++VSW ++IAG +N +E L + M ++ + T
Sbjct: 182 RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L S++ A+ + +GK +HG ++ G++ + ++ ++L+DMY KC + D+ VF L
Sbjct: 242 LSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLT 301
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
D +SW ++I G Q+G D+ L+ F A P + +S++ A A L L++G+
Sbjct: 302 ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 361
Query: 369 VHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----- 422
+H R G E+ + ++LVDMYAKC I A+ IF+ +D+++W ++I G
Sbjct: 362 LHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQ 421
Query: 423 ------------DDNVSPDAVTLVSVISACASLGAV 446
+ + P+ V ++V++AC+ G V
Sbjct: 422 APDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLV 457
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 6/250 (2%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H I GL D + L+ MY V + VF + D S+ +I N
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQN 318
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVL 183
L+ + + F++ M + ++ FS ++ AC L + G ++H I + G ++ F+
Sbjct: 319 GLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 378
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ LVDMYAKC +I +++Q+FD +++VSWT+MI G + A + + LF +M ++
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK 438
Query: 244 GNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N + +++TAC+ + + K+ + GI A+ D+ + G + +A
Sbjct: 439 PNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA-- 496
Query: 303 VFDELCSIDL 312
+D +C + +
Sbjct: 497 -YDFICGMHI 505
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 189/568 (33%), Positives = 303/568 (53%), Gaps = 27/568 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D + V++ + + + G ++H ++ G P +F+ LV+MY+KC ++ + ++F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D +N+VSWT+MI+G QN E + F MR Q S + ACA L ++
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +H LK GI + + L DMY KCG + DA VF+E+ D VSWTAMI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
+ G ++AL F + + + S L A L GR VHS ++LG E D
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 383 VINALVDMYAKCHVIADARYIFETTSE-KDVIAWNSIISGLDDN---------------- 425
V NAL DMY+K + A +F SE ++V+++ +I G +
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P+ T S+I ACA+ A++ G+ LHA K + +V + L++ Y KCG +
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINF-DEDPFVSSILVDMYGKCGLLEQ 362
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A FD + + + W++++ +G G G ++ +F M++ V+PN + F ++L+ CSH
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 422
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G+V EG FYSM + + VP +HY C++DLL RAGRL+EA EF+ MP EP+ +
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
+FL C ++ ++G++ +K+++L P + VL+SN+YA++ +W V VR M+
Sbjct: 483 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 542
Query: 665 LSKSPGCSLVDLDI------ANDFSFSR 686
+ K PG S VD+ A D+S R
Sbjct: 543 VKKLPGYSWVDVGYKTHVFGAEDWSHPR 570
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 250/511 (48%), Gaps = 47/511 (9%)
Query: 66 KAFHALLIVDGLTNDKCN---TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
K HALLI G T C LV+MY G + +A +FD+MP + S+ MI
Sbjct: 25 KQLHALLICAGYT--PCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLS 82
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N + + + + MR + F FS ++AC L I+ G ++HC +K G G + F
Sbjct: 83 QNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L DMY+KC + + +VF+E K+ VSWT+MI GY + +E L+ F +M +
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V +Q L S + AC L+A G+ +H ++K+G E + + AL DMY K G++ A
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262
Query: 302 SVF--DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
+VF D C ++VS+T +I GY ++ +K L +F + + PN T +S++ A A
Sbjct: 263 NVFGIDSECR-NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321
Query: 360 LGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L G +H+ +++ ED V + LVDMY KC ++ A F+ + IAWNS+
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSL 381
Query: 419 IS-----GL------------DDNVSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQG 460
+S GL D V P+A+T +S+++ C+ G V+ G ++ G
Sbjct: 382 VSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD------- 512
++ + + +++ + G + A+ + M E N W + +G + GD
Sbjct: 442 VVPGEEHY-SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLA 500
Query: 513 ----------GGGSLALFSDMLNEEVQPNEV 533
G+L L S++ E Q +V
Sbjct: 501 AEKLVKLEPKNSGALVLLSNIYANERQWEDV 531
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 306/557 (54%), Gaps = 27/557 (4%)
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK----VHCEIV--KVGGPDS 180
++ IV + RLK VFSK +AC + D G+K +H +IV + D
Sbjct: 17 FRGIVSSTRIRFDRLKVE---VFSK--EACEVILDQYPGIKTLNKLHSKIVINEHLRIDP 71
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
+ L+ Y+ + +R +FD +L+KNVV + MI YV N+ E L +F M
Sbjct: 72 TLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSC 131
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+ T ++ AC+ L L G +H I+K+G++ N + AL+ MY KCG +R+A
Sbjct: 132 AFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREA 191
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
R V D++ D+VSW +M+ GY QSG D AL++ + + + T+AS LS
Sbjct: 192 RKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCY 250
Query: 361 GNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L + +H++ R+ ++ N ++ +Y + +A +F E
Sbjct: 251 TSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEEC---------- 300
Query: 421 GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ PDAVT+ S++ AC L A+ +G LH Y ++G L N+ + ALL+ YAKCG
Sbjct: 301 ----GMKPDAVTIASLLPACGDLSALFLGRRLHKY-IEKGNLRPNLLLENALLDMYAKCG 355
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ AR VFD MR ++ V+W++M+ YG G G ++ALF+ ML+ P+ + F ++LS
Sbjct: 356 CLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLS 415
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSHTG++ +G F M + VP ++H+ CMVDL RAG +EEA F++ MP+EP+
Sbjct: 416 ACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNE 475
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++GA L C ++S+ D+G V + +L P ++ YYVL+SN+YA G W V VR M
Sbjct: 476 RVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAM 535
Query: 661 KQRGLSKSPGCSLVDLD 677
K+ G+ K PG S V+L+
Sbjct: 536 KKIGIKKVPGISNVELN 552
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 202/442 (45%), Gaps = 53/442 (11%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KL+ Y + G AR +FD + F VMIR Y N+LY + + ++ M
Sbjct: 76 KLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNP 135
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D++ F VLKAC L ++ G++VH IVKVG + F+ LV MY KC + +R+V
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D+ ++VVSW SM+AGY Q+ + L + M + + T+ SL
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC------ 249
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
Y N++ ++F+ + +L+SW MI Y
Sbjct: 250 ---------------------------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYV 282
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
+ P++A+ LF + P+ VTIAS+L A L L +GR +H + L +
Sbjct: 283 NNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLL 342
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ NAL+DMYAKC + +AR +F+ +DV++W S++S LD
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+PD++ VSV+SAC+ G + G T+Q + + +++ + + G+ + A
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 486 RMVFDAM-REKNTVTWSAMIGG 506
M E N W A++
Sbjct: 463 YSFIKQMPMEPNERVWGALLSA 484
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 173/383 (45%), Gaps = 47/383 (12%)
Query: 49 SIPCLNLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFD 104
+ PC+ L C +L+ H ++ GL TN LV+MYG G ++ AR V D
Sbjct: 139 TFPCV--LKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
MP D S+ M+ Y + + D +E K M HD + + C
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC------- 249
Query: 165 GMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
Y ++ +F+ KN++SW MIA YV N
Sbjct: 250 -------------------------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNN 284
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E + LF +M E ++ + +T+ SL+ AC L AL G+ LH YI K + N L
Sbjct: 285 SMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLE 344
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
ALLDMY KCG + +AR VFD++ D+VSWT+M+ Y +SG A+ LF +
Sbjct: 345 NALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQN 404
Query: 345 PNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
P+ + SVLSA + G L+ GR M GI +E + +VD++ + + +
Sbjct: 405 PDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA---CMVDLFGRAGEVEE 461
Query: 400 A-RYIFETTSEKDVIAWNSIISG 421
A +I + E + W +++S
Sbjct: 462 AYSFIKQMPMEPNERVWGALLSA 484
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 193/551 (35%), Positives = 300/551 (54%), Gaps = 24/551 (4%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK----VHCEIV--KVGGPDSFVLTGL 186
F R R VFSK +AC + D G+K +H +IV + D + L
Sbjct: 20 FVSLTRIRFDRLKVEVFSK--EACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKL 77
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ Y+ + +R +FD +L+KNVV + MI YV N+ E L +F M +
Sbjct: 78 MRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDH 137
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
T ++ AC+ L L G +H I+K+G++ N + AL+ MY KCG +R+AR V D+
Sbjct: 138 YTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQ 197
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D+VSW +M+ GY QSG D AL++ + + + T+AS LS +L
Sbjct: 198 MPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMAS-LSPVVCYTSLENV 256
Query: 367 RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV 426
+ +H++ R+ ++ N ++ +Y + +A +F E +
Sbjct: 257 QYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEEC--------------GM 302
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PDAVT+ S++ AC L A+ +G LH Y K G L N+ + ALL+ YAKCG + AR
Sbjct: 303 KPDAVTIASLLPACGDLSALFLGRRLHKYIEK-GNLQPNLLLENALLDMYAKCGCLEEAR 361
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD MR ++ V+W++M+ YG G G ++ALF+ ML+ P+ + F ++LSACSHTG
Sbjct: 362 DVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG 421
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
++ +G F M + VP ++H+ CMVDL RAG +EEA F++ MP+EP+ ++GA
Sbjct: 422 LLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGAL 481
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++S+ D+G V + +L P ++ YYVL+SN+YA G W V VR MK+ G+
Sbjct: 482 LSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIK 541
Query: 667 KSPGCSLVDLD 677
K PG S V+L+
Sbjct: 542 KVPGISNVELN 552
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/442 (28%), Positives = 203/442 (45%), Gaps = 53/442 (11%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KL+ Y + G AR +FD + F VMIR Y N+LY + + ++ M
Sbjct: 76 KLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNP 135
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D++ F VLKAC L ++ G++VH IVKVG + F+ LV MY KC + +R+V
Sbjct: 136 DHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVL 195
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D+ ++VVSW SM+AGY Q+ + L + M + + T+ SL
Sbjct: 196 DQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC------ 249
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
Y N++ ++F+ + +L+SW MI Y
Sbjct: 250 ---------------------------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYV 282
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
+ P++A+ LF + P+ VTIAS+L A L L +GR +H + L+ +
Sbjct: 283 NNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLL 342
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ NAL+DMYAKC + +AR +F+ +DV++W S++S LD
Sbjct: 343 LENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSG 402
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+PD++ VSV+SAC+ G + G T+Q + + +++ + + G+ + A
Sbjct: 403 QNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEA 462
Query: 486 RMVFDAM-REKNTVTWSAMIGG 506
M E N W A++
Sbjct: 463 YSFIKQMPMEPNERVWGALLSA 484
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 174/383 (45%), Gaps = 47/383 (12%)
Query: 49 SIPCLNLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFD 104
+ PC+ L C +L+ H ++ GL TN LV+MYG G ++ AR V D
Sbjct: 139 TFPCV--LKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLD 196
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
MP D S+ M+ Y + + D +E K M HD + + C
Sbjct: 197 QMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVC------- 249
Query: 165 GMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
Y ++ +F+ KN++SW MIA YV N
Sbjct: 250 -------------------------YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNN 284
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E + LF +M E ++ + +T+ SL+ AC L AL G+ LH YI K ++ N L
Sbjct: 285 SMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLE 344
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
ALLDMY KCG + +AR VFD++ D+VSWT+M+ Y +SG A+ LF +
Sbjct: 345 NALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQN 404
Query: 345 PNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
P+ + SVLSA + G L+ GR M GI +E + +VD++ + + +
Sbjct: 405 PDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFA---CMVDLFGRAGEVEE 461
Query: 400 A-RYIFETTSEKDVIAWNSIISG 421
A +I + E + W +++S
Sbjct: 462 AYSFIKQMPMEPNERVWGALLSA 484
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 189/624 (30%), Positives = 316/624 (50%), Gaps = 23/624 (3%)
Query: 74 VDGLTNDKCNTKLVSMYGSFGHVKYA-RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE 132
++GL + ++ LV Y S G V A R++ DS D S+ ++ Y + Y ++
Sbjct: 190 LEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDV-SWNALLNEYARDGDYAKVML 248
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYA 191
+ + + E + VLK C EL G VH ++K G VL L++MY+
Sbjct: 249 VFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYS 308
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC + +VF + +VV + MI+ + ++D A E +F +M + V+ NQ T
Sbjct: 309 KCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVG 368
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L ++ ++ + +H +I+K G + A++ MYVK G ++DA FD + D
Sbjct: 369 LAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPD 428
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
+ SW ++ G+ + L++F + N T +L L +L G VH+
Sbjct: 429 IASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHA 488
Query: 372 LGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------- 421
++ G + DY V L+DMY + +AR +F+ E+DV +W ++S
Sbjct: 489 CVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEK 548
Query: 422 --------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
L +N P+ TL + +S C+ L + G LH+Y+ K G SS V +AL+
Sbjct: 549 AIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSS--VVSSALV 606
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y KCG+ A M+FD + V W+ +I GY G G +L F +M++E P+E+
Sbjct: 607 DMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEI 666
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +LSACSH G++ EG + F + + P+++HY CMVD+LA+AG+L EA +
Sbjct: 667 TFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINE 726
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
MP+ PD SL+ L C ++ ++ E +K+ E PD +L+SN+YA RW V
Sbjct: 727 MPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDV 786
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
++R ++ RG+ K PGCS ++++
Sbjct: 787 AKLRSMLVDRGVKKEPGCSWIEIN 810
Score = 202 bits (513), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/508 (25%), Positives = 243/508 (47%), Gaps = 21/508 (4%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
KA HA L+ G D + L++MY G + ARSVFD MP+ D ++ M+
Sbjct: 80 KALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAA 139
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVL 183
+ + M + + F + LKAC D+ +VH + VK+ G D +V
Sbjct: 140 GDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVS 199
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ LV+ Y C ++ + + ++ ++ VSW +++ Y ++ + +++F+++ E E
Sbjct: 200 SSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDE 259
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
++ TL +++ C +L G+ +HG ++K G+E + L L++MY KC + DA V
Sbjct: 260 ISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEV 319
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F + D+V + MI + + +A +F PN T + +++ G++
Sbjct: 320 FARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDV 379
Query: 364 NMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG- 421
N+ R +H+ ++ G V +A+V MY K + DA F+ D+ +WN+++SG
Sbjct: 380 NLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGF 439
Query: 422 ----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+ + V + T V ++ C SL ++ G +HA K G +
Sbjct: 440 YSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSG-FQGD 498
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
V LL+ Y + G +AR+VFD ++E++ +W+ ++ Y +G ++ F ML
Sbjct: 499 YDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLR 558
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWK 553
E +PN+ T LS CS +G G +
Sbjct: 559 ENKRPNDATLATSLSVCSDLACLGSGLQ 586
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 200/426 (46%), Gaps = 22/426 (5%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDI 196
R RL+ + ++ L+ C R + G +H +++ G PD+F+ L++MY KC +
Sbjct: 52 RLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRL 111
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+R VFD ++VV+WT+M++ A L LF M E V N L + + AC
Sbjct: 112 ADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKAC 171
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA-RSVFDELCSIDLVSW 315
L +H +K+ + ++ ++L++ YV CG + A R++ D D VSW
Sbjct: 172 TVGSDLGFTPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSD-VSW 230
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A++ Y + G K + +F + + T+ +VL +LG G+ VH L I+
Sbjct: 231 NALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIK 290
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
GLE D + N L++MY+KC DA +F E DV+ + +IS D +
Sbjct: 291 RGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDI 350
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
V P+ T V + + G V + S+HA+ K G S V A++ Y
Sbjct: 351 FMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSG-FSRTKGVCDAIVGMYV 409
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
K G Q A + FD M+ + +W+ ++ G+ + L +F +++ E V N+ +
Sbjct: 410 KTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVG 469
Query: 538 ILSACS 543
IL C+
Sbjct: 470 ILRCCT 475
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 181/387 (46%), Gaps = 35/387 (9%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
+ + + CA RAL +GK LH +L+ G ++ L +LL+MY KCG + DARSVFD +
Sbjct: 62 SYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGM 121
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
D+V+WTAM+ T +G AL+LF + PN +A+ L A +L
Sbjct: 122 PHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTP 181
Query: 368 MVHSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
VH+ ++L GL D V ++LV+ Y C + A + + ++WN++++
Sbjct: 182 QVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDG 241
Query: 422 --------LDDNV-SPDAV---TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
D V S D + TL +V+ C LG + G ++H K+GL + V +
Sbjct: 242 DYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRV-LN 300
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
L+ Y+KC A+ A VF + E + V S MI + + +F M + V+
Sbjct: 301 NCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVK 360
Query: 530 PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF-----KFVPSMKHYVC--MVDLLARAG 582
PN+ F + S TG V ++CR K S VC +V + + G
Sbjct: 361 PNQYTFVGLAIVASRTGDV--------NLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTG 412
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHG 609
+++A+ + M PD++ + L G
Sbjct: 413 AVQDAILAFDLMQ-GPDIASWNTLLSG 438
>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g04860-like [Cucumis sativus]
Length = 704
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 194/611 (31%), Positives = 314/611 (51%), Gaps = 26/611 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+T + +Y G VK A+ +FD P D S+ +I Y D + + MR+R
Sbjct: 101 STAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREF 160
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ ++ +C + +G +H VK G DS V LV MY KC D+ +
Sbjct: 161 DPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKL 220
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F E +K+VVSW +MI + QN E +++F +M E V N +T+ S+++A A
Sbjct: 221 LFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGC 280
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+H Y KIG+ N +VT+L+ YVKCG I A ++ +LV+ TA+I
Sbjct: 281 IH------CYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISH 334
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Y + G ++L++ + D + V + ++ ++ +G H G++ GL D
Sbjct: 335 YAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIID 394
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD---------------- 424
V N + MY+K I +F+ +K + +WNS+IS
Sbjct: 395 CLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTL 454
Query: 425 -NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
PD++TL S++SAC G + G LH Y + L +VGTAL++ Y KCG
Sbjct: 455 SGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNL-DLEGFVGTALVDMYVKCGRMD 513
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A VF +M+E +W+++I GYG+ G +L +++M+ + ++PN++ F+ IL+AC+
Sbjct: 514 FAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACT 573
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G+V EG K F M + F VP +H MV +L RAG EEA+ F++NM PD +++
Sbjct: 574 HGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVW 633
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
GA L C ++ LGE + KK+ + ++VL+SNLYA+ RW V ++R++M++
Sbjct: 634 GALLSACCIHQEVKLGESVAKKLFFSNCSNGGFFVLMSNLYAASRRWNDVARIRKMMREM 693
Query: 664 GLSKSPGCSLV 674
G G SLV
Sbjct: 694 GEDGCSGVSLV 704
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 264/543 (48%), Gaps = 54/543 (9%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKAC-------------CELRDIDEGMKVHCEIVKVGGPD 179
F + +R R+K +D+ FS ++KA C + E ++ +K G D
Sbjct: 38 FRELLRHRVKPNDS-TFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIK-WGFD 95
Query: 180 SF--VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
F V T +D+Y+K + +++++FD+ +K+VVSW ++I+GY + + + LF M
Sbjct: 96 QFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEM 155
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R + Q TL SL+ +C + QGK +HG +K G++++S + AL+ MY KC ++
Sbjct: 156 RRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADL 215
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+ +F E+ +VSW MI + Q+G +A+ +F N VT+ S+LSA+
Sbjct: 216 DGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSAN 275
Query: 358 AQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A G +H ++GL E+ +V+ +LV Y KC I A I+ + +K+++A
Sbjct: 276 ANTG------CIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALT 329
Query: 417 SIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+IIS + ++ DAV +V +I + +G + H Y K
Sbjct: 330 AIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKS 389
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
GL+ + V ++ Y+K + + +F M +K +W+++I G ++AL
Sbjct: 390 GLI-IDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMAL 448
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMV--GEGWKCFYSMCRDFKFVPSMKHYV--CMV 575
FS M P+ + ++LSAC G + GE C+ + ++ +V +V
Sbjct: 449 FSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYI-----LRNNLDLEGFVGTALV 503
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDK 633
D+ + GR++ A ++M EP ++ + + + G GL+ + + +M+E + P+K
Sbjct: 504 DMYVKCGRMDFAENVFKSMK-EPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNK 562
Query: 634 ACY 636
+
Sbjct: 563 ITF 565
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 237/523 (45%), Gaps = 74/523 (14%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA-------------- 255
++ ++ S YV+ C L+LF + V+ N T L+ A
Sbjct: 14 SLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSF 73
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C++ + L + +K G + ++ TA LD+Y K G ++ A+ +FD+ D+VSW
Sbjct: 74 CSE-NEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A+I GYT+ G A KLF + + +F P T+ S++ + G+ +H LG++
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVK 192
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
GL+ D V NALV MY KC + + +F +EK V++WN++I
Sbjct: 193 AGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLV 252
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
L+++V+ ++VT+VS++SA A+ G + H Y+TK GL+ NV V T+L+ Y
Sbjct: 253 FKQMLEESVNANSVTMVSILSANANTGCI------HCYATKIGLV-ENVSVVTSLVCSYV 305
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG + A +++ + +KN V +A+I Y +GD G + L+S + + +++ + V
Sbjct: 306 KCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVG 365
Query: 538 ILSACSHTGMVGEGW------------------KCFYSMCRDFKFV------------PS 567
I+ ++ +G G F SM F + +
Sbjct: 366 IIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKT 425
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIK 624
+ + ++ A+AGR +A+ M + PD + L C GE++
Sbjct: 426 LSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHC 485
Query: 625 KMLELHPDKACYY-VLVSNLYASDGRWIRVNQVRELMKQRGLS 666
+L + D + + ++Y GR V + MK+ L+
Sbjct: 486 YILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLA 528
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 183/608 (30%), Positives = 323/608 (53%), Gaps = 35/608 (5%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + A +FD MP + ++ ++ Y N + + + M + ++F + L
Sbjct: 62 GRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAAL 121
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
AC +L + G +VH V+ G D+++ + L++MY++C + ++++VFD +VV
Sbjct: 122 VACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVV 181
Query: 213 SWTSMIAGYVQN---DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+TS+I+ + +N + A E L+ +M + ++ N+ T+ +++TAC ++ G+ +H
Sbjct: 182 GYTSLISAFCRNGEFELAAEALI---QMLKQGLKPNEHTMTTILTACPRV----LGQQIH 234
Query: 270 GYILK-IGIEINS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
GY++K IG+ S + TAL+D Y + G + A++VFD L ++VSW +M+ Y + G
Sbjct: 235 GYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGR 294
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINA 386
++AL++F D PN ++ VL A +G +GR +H I+ L D V NA
Sbjct: 295 LEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNA 351
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
L+ MY + ++ + + D+++W + IS N +P+
Sbjct: 352 LLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPN 411
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
SV+S+CA + ++ G H + K G S + G AL+N Y+KCG SAR+ F
Sbjct: 412 GYAFSSVLSSCADVASLDQGMQFHCLALKLGC-DSEICTGNALINMYSKCGQMGSARLAF 470
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M + +W+++I G+ GD +L +FS M + ++P++ F +L C+H+GMV
Sbjct: 471 DVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVE 530
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG F M + F P+ HY CM+D+L R GR +EAL + +MP EPD ++ L
Sbjct: 531 EGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLAS 590
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C L+ D+G++ +++EL + YVL+SN+YA G W +VR M + G+ K
Sbjct: 591 CKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDA 650
Query: 670 GCSLVDLD 677
GCS ++++
Sbjct: 651 GCSWIEIN 658
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 220/480 (45%), Gaps = 33/480 (6%)
Query: 52 CLNLLGLCKSTGSLKA---FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP 107
C L C G+L+A H+L + G D + L+ MY G + A+ VFD M
Sbjct: 117 CNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMD 176
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+PD + +I + N ++ E M K+ + + + +L AC + G +
Sbjct: 177 SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQ 232
Query: 168 VHCEIVKVGGPDS---FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H ++K G S + T L+D Y++ + ++ VFD KNVVSW SM+ Y+++
Sbjct: 233 IHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRD 292
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+E L +F M V+ N+ L ++ AC ++ G+ LH +K + + +
Sbjct: 293 GRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVS 349
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
ALL MY + G + + ++ +++ + DLVSWT I Q+G+ +KA+ L F
Sbjct: 350 NALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFT 409
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
PN +SVLS+ A + +L+ G H L ++LG + + NAL++MY+KC + AR
Sbjct: 410 PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLA 469
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
F+ DV +WNS+I G + + PD T + V+ C G V
Sbjct: 470 FDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMV 529
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIG 505
+ G Q + +++ + G A RM+ D E + + W ++
Sbjct: 530 EEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 589
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/528 (24%), Positives = 241/528 (45%), Gaps = 63/528 (11%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
PD + ++ K + + +FD KNVV+WTS+++GY +N + L +F M
Sbjct: 46 PDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADM 105
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
E V N + + ACA L AL G+ +H ++ G ++ + + L++MY +CG++
Sbjct: 106 VESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSL 165
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
A+ VFD + S D+V +T++I + ++G + A + PN T+ ++L+A
Sbjct: 166 PAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTAC 225
Query: 358 AQLGNLNMGRMVHSLGI-RLGLEDYTVIN--ALVDMYAKCHVIADARYIFETTSEKDVIA 414
++ +G+ +H I ++GL +V + AL+D Y++ A+ +F++ K+V++
Sbjct: 226 PRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVS 281
Query: 415 WNSIIS-----------------GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
W S++ + + V P+ L V+ AC S+G +G LH +
Sbjct: 282 WCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIG---LGRQLHCSAI 338
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K L+ +++ V ALL+ Y + G + + + + + V+W+ I G G ++
Sbjct: 339 KHDLI-TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAI 397
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG--WKCF-------------------Y 556
AL M +E PN F+++LS+C+ + +G + C Y
Sbjct: 398 ALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMY 457
Query: 557 SMCR---------DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLFG 604
S C D + + ++ A+ G +ALE M I+PD S F
Sbjct: 458 SKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFL 517
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHP--DKACYYVLVSNLYASDGRW 650
L GC + GE+ + M++ + +Y + ++ +GR+
Sbjct: 518 GVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRF 565
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 12/193 (6%)
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S +V + LN K G A +FD M KN V W++++ GY G +LA+F+D
Sbjct: 45 SPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M+ V PN+ L AC+ G + G + +S+ F C++++ +R G
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQ-VHSLAVRAGFAGDAWIGSCLIEMYSRCG 163
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDK------- 633
L A E + M PDV + + + F+L + +ML+ L P++
Sbjct: 164 SLPAAKEVFDRMD-SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTIL 222
Query: 634 -ACYYVLVSNLYA 645
AC VL ++
Sbjct: 223 TACPRVLGQQIHG 235
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 257/443 (58%), Gaps = 18/443 (4%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
S++ ACA + G+ +HG +K + + LLDMY KCG + A VFD +
Sbjct: 3 SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
+V+WT++I Y + G D+A++LF + P+ TI +VL A A G+L G+ VH
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 371 SLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---- 425
+ ++ + V NAL+DMYAKC + DA +F KD+I+WN++I G N
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
+ PD TL ++ ACASL ++ G +H + + G S V AL+
Sbjct: 183 EALSLFGDMVLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQ-QVANALV 241
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y KCG AR++FD + K+ +TW+ MI GYGM G G ++ F++M ++P+EV
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +IL ACSH+G++ EGW+ F M + P ++HY C+VDLLAR+G+L A +F+++
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKS 361
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
MPIEPD +++GA L GC ++ L E + + + EL P+ YYVL++N YA +W V
Sbjct: 362 MPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEV 421
Query: 654 NQVRELMKQRGLSKSPGCSLVDL 676
++R+ + +RGL K+PGCS +++
Sbjct: 422 KKLRQKIGRRGLKKNPGCSWIEV 444
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 192/382 (50%), Gaps = 23/382 (6%)
Query: 152 VLKACCELRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
+L+AC D+ G VH VK V +F T L+DMYAKC + + VFD +
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNT-LLDMYAKCGVLDGAILVFDLMSVR 62
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
VV+WTS+IA Y + + E + LF+ M V + T+ +++ ACA +L GK +H
Sbjct: 63 TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
YI + ++ N + AL+DMY KCG++ DA SVF E+ D++SW MI GY+++ P+
Sbjct: 123 NYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPN 182
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALV 388
+AL LF D + P+ T+A +L A A L +L+ G+ VH +R G D V NALV
Sbjct: 183 EALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALV 241
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAV 431
DMY KC V AR +F+ KD+I W +I+G + PD V
Sbjct: 242 DMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEV 301
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
+ +S++ AC+ G + G + + + +++ A+ G A +
Sbjct: 302 SFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKS 361
Query: 492 MR-EKNTVTWSAMIGGYGMQGD 512
M E + W A++ G + D
Sbjct: 362 MPIEPDATIWGALLSGCRIHHD 383
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 174/347 (50%), Gaps = 12/347 (3%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
CNT L+ MY G + A VFD M ++ +I Y L + + + M +
Sbjct: 36 CNT-LLDMYAKCGVLDGAILVFDLMSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREG 94
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
D F + VL AC ++ G VH I + + FV L+DMYAKC + +
Sbjct: 95 VSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDAN 154
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
VF E K+++SW +MI GY +N E L LF M ++ + TL ++ ACA L
Sbjct: 155 SVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE-MKPDGTTLACILPACASLA 213
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+L +GK +HG+IL+ G + + AL+DMYVKCG AR +FD + + DL++WT MI
Sbjct: 214 SLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIA 273
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIR 375
GY G+ + A+ F + + A P+ V+ S+L A + G L+ G M ++
Sbjct: 274 GYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVK 333
Query: 376 LGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISG 421
LE Y I VD+ A+ +A A ++I E D W +++SG
Sbjct: 334 PKLEHYACI---VDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 158/318 (49%), Gaps = 31/318 (9%)
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+ S+L A A G++++GR VH G++ + T N L+DMYAKC V+ A +F+ S
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 409 EKDVIAWNSIIS-----GLDDN------------VSPDAVTLVSVISACASLGAVQVGSS 451
+ V+ W S+I+ GL D VSPD T+ +V+ ACA G+++ G
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+H Y ++ + SN++V AL++ YAKCG + A VF M K+ ++W+ MIGGY
Sbjct: 121 VHNY-IRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNS 179
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
+L+LF DM+ E++P+ IL AC+ + G + + R+ F +
Sbjct: 180 LPNEALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRN-GFFSDQQVA 237
Query: 572 VCMVDLLARAGRLEEALEFMENMP----IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+VD+ + G A + +P I V + G +HG G + E+ +
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEM---RQA 294
Query: 628 ELHPDKACYYVLVSNLYA 645
+ PD+ + +S LYA
Sbjct: 295 GIEPDEVSF---ISILYA 309
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 17/297 (5%)
Query: 35 HELDQTFASFHSLPSIPCLN-LLGLCKSTGSL---KAFHALLIVDGLTND--KCNTKLVS 88
HE+D+ S P I + +L C GSL K H + + + ++ CN L+
Sbjct: 88 HEMDREGVS----PDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFVCNA-LMD 142
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MY G ++ A SVF MP D S+ MI Y N L + + + M +K D
Sbjct: 143 MYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLEMKP-DGTT 201
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ +L AC L +D G +VH I++ G D V LVDMY KC +R +FD
Sbjct: 202 LACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLARLLFDMIP 261
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
K++++WT MIAGY + + FN MR+ +E ++++ S++ AC+ L +G W
Sbjct: 262 TKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHSGLLDEG-W 320
Query: 268 LHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVG 321
+++ + L ++D+ + G + A + D W A++ G
Sbjct: 321 RFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMPIEPDATIWGALLSG 377
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 193/612 (31%), Positives = 321/612 (52%), Gaps = 23/612 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+LV Y AR VFD +P +S+ V++ N Y+D ++++ +
Sbjct: 102 NQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIV 161
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D + S ++AC + I G VH +++ G +FV T L+ MYAK IG S +V
Sbjct: 162 PDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKV 221
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F+ ++N VSW +MI+G+V N E F RM + N S+ A +L +
Sbjct: 222 FNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDV 281
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL---CSIDLVSWTAMI 319
+G++++ +IG++ N H+ TAL+DM+ KCG + ++ SVF C ++L W AMI
Sbjct: 282 EKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNL-PWNAMI 340
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
G+T SG+ ++A+ LF + + T S L++ A + +L + +H + + G
Sbjct: 341 SGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSGSI 400
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------DDNVS------ 427
++ NAL+D YAKC + R +F+T E + I+W ++++ +D +S
Sbjct: 401 GVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMR 460
Query: 428 -----PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
P+ VT V+++CASL +++ G +H+ + K G + + V + L++ YAKCG
Sbjct: 461 EMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGF-ARDKCVESVLIDMYAKCGSV 519
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ A VF+++++ + ++W+AMI GY G +L LF M PN F +L AC
Sbjct: 520 RDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFAC 579
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH G+V EG + F+ M + VP ++HY C+VD+L R GRL EA +F+ MPIEPD +
Sbjct: 580 SHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKV 639
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ L C ++ L ++ +K+L +PD VL+SN Y G VR +MK
Sbjct: 640 WSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKS 699
Query: 663 RGLSKSPGCSLV 674
+ + K G S +
Sbjct: 700 QAMRKETGMSWI 711
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 258/521 (49%), Gaps = 41/521 (7%)
Query: 151 KVLKACCELRDIDEGMKVHCEIVK---VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
++++ + R + + +H ++K + + +L LV Y+KC D GS+RQVFDE
Sbjct: 66 ELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIP 125
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
K+V SWT ++ G +N ++G+ F + + ++ L + + AC + ++ G+
Sbjct: 126 QKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEM 185
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H ++ G + + T+LL MY K G I D+ VF+ L + + VSW AMI G+ +G
Sbjct: 186 VHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGL 245
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
+A F + PN SV A QLG++ GR ++ + +G++ + V A
Sbjct: 246 YAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTA 305
Query: 387 LVDMYAKCHVIADARYIFETT-SEKDV-IAWNSIISGL-----------------DDNVS 427
L+DM+AKC + ++ +F + S V + WN++ISG +N+
Sbjct: 306 LIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIK 365
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
D T S +++ A + +++ LH K G S V + AL++ YAKCG+ + R
Sbjct: 366 RDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG--SIGVSLCNALMDAYAKCGELDAMRK 423
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS---- 543
+FD E N ++W+ ++ Y + +L++FS M QPN+V F+ +L++C+
Sbjct: 424 LFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCS 483
Query: 544 -HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
G C RD K V S+ ++D+ A+ G + +A++ E++ +PDV
Sbjct: 484 LEYGQQVHSLTCKTGFARD-KCVESV-----LIDMYAKCGSVRDAIKVFESLK-DPDVIS 536
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLEL---HPDKACYYVLV 640
+ A + G + + +KM EL +P+ A + L+
Sbjct: 537 WTAMISGYAQHGMAKDALELFRKM-ELVLPNPNSATFLCLL 576
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 227/468 (48%), Gaps = 26/468 (5%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA +I G ++ NT L+ MY G + + VF+S+ N + S+ MI + N LY
Sbjct: 187 HAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLY 246
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGL 186
+ + M + F V KA +L D+++G ++ ++G + V T L
Sbjct: 247 AEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTAL 306
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVS--WTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
+DM+AKC + S VF V+ W +MI+G+ + +E ++LF RM + ++
Sbjct: 307 IDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKR 366
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ T S + + A +R+L K LHG I K G I L AL+D Y KCG + R +F
Sbjct: 367 DVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLF 425
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + +SWT ++ Y+QS + AL +F+ + F PN VT + VL++ A L +L
Sbjct: 426 DTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLE 485
Query: 365 MGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G+ VHSL + G D V + L+DMYAKC + DA +FE+ + DVI+W ++ISG
Sbjct: 486 YGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYA 545
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLSSN 465
+ +P++ T + ++ AC+ G V G H + GL+
Sbjct: 546 QHGMAKDALELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEI 605
Query: 466 VYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
+ +++ + G A + + E + WS ++G + G+
Sbjct: 606 EHYA-CVVDILGRVGRLTEAWKFIMKMPIEPDEKVWSTLLGACRVHGN 652
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 2/250 (0%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
LN + +S +K H ++ G L+ Y G + R +FD+ +
Sbjct: 375 LNSIADMRSLEYVKQLHGMIWKSGSIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQI 434
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
S+ ++ Y + ++D + + MR+ + + FS VL +C L ++ G +VH
Sbjct: 435 SWTTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLT 494
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
K G D V + L+DMYAKC + + +VF+ D +V+SWT+MI+GY Q+ A++ L
Sbjct: 495 CKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDAL 554
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDM 290
LF +M N T L+ AC+ + +G ++ H + G+ ++D+
Sbjct: 555 ELFRKMELVLPNPNSATFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDI 614
Query: 291 YVKCGNIRDA 300
+ G + +A
Sbjct: 615 LGRVGRLTEA 624
>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 204/653 (31%), Positives = 346/653 (52%), Gaps = 38/653 (5%)
Query: 55 LLGLCKSTGSL------KAFHALLIVDGLTNDKCN----TKLVSMYGSFGHVKYARSVFD 104
L+G+ K GS+ K H L I G +D+ + T LV MY + V R VF+
Sbjct: 106 LVGVLKVCGSVPDRVLGKQLHGLCIRCG--HDRGDVGVGTSLVDMYMKWHSVVDGRKVFE 163
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
+MP + ++ ++ Y + D++E + MR ++ F+ VL +D
Sbjct: 164 AMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDL 223
Query: 165 GMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G +VH + VK G + FV L++MYAKC + +R VF +++VSW +++AG V
Sbjct: 224 GRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVL 283
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
N E L LF+ R Q T +++ CA ++ L + LH +LK G ++
Sbjct: 284 NGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNV 343
Query: 284 VTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+TAL+D Y K G + +A +F + S ++VSWTAMI G Q+G A LF+ +
Sbjct: 344 MTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDG 403
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADAR 401
PN T +++L+AS ++ +H+ I+ E +++ AL+ Y+K +A
Sbjct: 404 VAPNDFTYSTILTASVA----SLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEAL 459
Query: 402 YIFETTSEKDVIAWNSIIS-----GLDDNVS------------PDAVTLVSVISACASLG 444
IF+ +KDV++W+++++ G D + P+ T+ SVI ACAS
Sbjct: 460 SIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPT 519
Query: 445 A-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
A V +G HA S K + + V +AL++ YA+ G +SA+ +F+ +++ V+W++M
Sbjct: 520 AGVDLGRQFHAISIKHRCHDA-LCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSM 578
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
+ GY G +L +F M E ++ + V F +++ C+H G+V EG + F SM RD+
Sbjct: 579 LSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYG 638
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
P+M+HY CMVDL +RAG+L+EA+ +E M ++ L C ++ +LG++
Sbjct: 639 ITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAA 698
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+K+L L P + YVL+SN+Y++ G+W ++VR+LM + + K GCS + +
Sbjct: 699 EKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQI 751
>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Cucumis sativus]
Length = 704
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 194/611 (31%), Positives = 314/611 (51%), Gaps = 26/611 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+T + +Y G VK A+ +FD P D S+ +I Y D + + MR+R
Sbjct: 101 STAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREF 160
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ ++ +C + +G +H VK G DS V LV MY KC D+ +
Sbjct: 161 DPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKL 220
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F E +K+VVSW +MI + QN E +++F +M E V N +T+ S+++A A
Sbjct: 221 LFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTGC 280
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+H Y KIG+ N +VT+L+ YVKCG I A ++ +LV+ TA+I
Sbjct: 281 IH------CYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISH 334
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Y + G ++L++ + D + V + ++ ++ +G H G++ GL D
Sbjct: 335 YAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIID 394
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD---------------- 424
V N + MY+K I +F+ +K + +WNS+IS
Sbjct: 395 CLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTL 454
Query: 425 -NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
PD++TL S++SAC G + G LH Y + L +VGTAL++ Y KCG
Sbjct: 455 SGYGPDSITLASLLSACCQNGNLHFGEILHCYILRNNL-DLEGFVGTALVDMYVKCGRMD 513
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A VF +M+E +W+++I GYG+ G +L +++M+ + ++PN++ F+ IL+AC+
Sbjct: 514 FAENVFKSMKEPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACT 573
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G+V EG K F M + F VP +H MV +L RAG EEA+ F++NM PD +++
Sbjct: 574 HGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVW 633
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
GA L C ++ LGE + KK+ + ++VL+SNLYA+ RW V ++R++M++
Sbjct: 634 GALLSACCIHQEVKLGESVAKKLFFSNCRNGGFFVLMSNLYAASRRWNDVARIRKMMREM 693
Query: 664 GLSKSPGCSLV 674
G G SLV
Sbjct: 694 GEDGCSGVSLV 704
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 264/543 (48%), Gaps = 54/543 (9%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKAC-------------CELRDIDEGMKVHCEIVKVGGPD 179
F + +R R+K +D+ FS ++KA C + E ++ +K G D
Sbjct: 38 FRELLRHRVKPNDS-TFSLLIKAFVVSSSTSSFAPSFCSENEKAEANQLQTHFIK-WGFD 95
Query: 180 SF--VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
F V T +D+Y+K + +++++FD+ +K+VVSW ++I+GY + + + LF M
Sbjct: 96 QFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEM 155
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R + Q TL SL+ +C + QGK +HG +K G++++S + AL+ MY KC ++
Sbjct: 156 RRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADL 215
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+ +F E+ +VSW MI + Q+G +A+ +F N VT+ S+LSA+
Sbjct: 216 DGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSAN 275
Query: 358 AQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
A G +H ++GL E+ +V+ +LV Y KC I A I+ + +K+++A
Sbjct: 276 ANTG------CIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALT 329
Query: 417 SIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+IIS + ++ DAV +V +I + +G + H Y K
Sbjct: 330 AIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKS 389
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
GL+ + V ++ Y+K + + +F M +K +W+++I G ++AL
Sbjct: 390 GLI-IDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMAL 448
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMV--GEGWKCFYSMCRDFKFVPSMKHYV--CMV 575
FS M P+ + ++LSAC G + GE C+ + ++ +V +V
Sbjct: 449 FSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHCYI-----LRNNLDLEGFVGTALV 503
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDK 633
D+ + GR++ A ++M EP ++ + + + G GL+ + + +M+E + P+K
Sbjct: 504 DMYVKCGRMDFAENVFKSMK-EPCLASWNSLISGYGLFGFHNHALLCYTEMMEKGIKPNK 562
Query: 634 ACY 636
+
Sbjct: 563 ITF 565
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 237/523 (45%), Gaps = 74/523 (14%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA-------------- 255
++ ++ S YV+ C L+LF + V+ N T L+ A
Sbjct: 14 SLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSF 73
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C++ + L + +K G + ++ TA LD+Y K G ++ A+ +FD+ D+VSW
Sbjct: 74 CSE-NEKAEANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A+I GYT+ G A KLF + + +F P T+ S++ + G+ +H LG++
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVK 192
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
GL+ D V NALV MY KC + + +F +EK V++WN++I
Sbjct: 193 AGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLV 252
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
L+++V+ ++VT+VS++SA A+ G + H Y+TK GL+ NV V T+L+ Y
Sbjct: 253 FKQMLEESVNANSVTMVSILSANANTGCI------HCYATKIGLV-ENVSVVTSLVCSYV 305
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG + A +++ + +KN V +A+I Y +GD G + L+S + + +++ + V
Sbjct: 306 KCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVG 365
Query: 538 ILSACSHTGMVGEGW------------------KCFYSMCRDFKFV------------PS 567
I+ ++ +G G F SM F + +
Sbjct: 366 IIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKT 425
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGEVMIK 624
+ + ++ A+AGR +A+ M + PD + L C GE++
Sbjct: 426 LSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLHFGEILHC 485
Query: 625 KMLELHPDKACYY-VLVSNLYASDGRWIRVNQVRELMKQRGLS 666
+L + D + + ++Y GR V + MK+ L+
Sbjct: 486 YILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLA 528
>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
Length = 734
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 290/544 (53%), Gaps = 20/544 (3%)
Query: 152 VLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
+ +AC +LR + +G +H + + V P + L+ MY C ++VFDE L KN
Sbjct: 93 LFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKN 152
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
+VSW +I+ Y +N ++ + LF+ M+ + N SL+ +C L GK +H
Sbjct: 153 LVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHS 212
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
++++ + N + TA+ +MYV+CG + A+ VFD + + + V+WT ++VGYTQ+ +
Sbjct: 213 HVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEV 272
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
AL+LF + + VL L + +MG+ +HS ++LG E + +V LVD
Sbjct: 273 ALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVD 332
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVT 432
Y KC I A F SE + ++W+++ISG + V ++
Sbjct: 333 FYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFI 392
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
SV ACA+ + +GS H + K+GL+S +Y +A++ Y+KCG AR F+++
Sbjct: 393 YTSVFQACAAQANLNMGSQAHGDAIKRGLVSY-LYGESAMVTMYSKCGRLDYARRAFESI 451
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
E + V W+A+I GY G+ +L F M + V+PN V F +L+ACSH+G+V E
Sbjct: 452 DEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAK 511
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ SM RD+ P++ HY CM+D +RAG L EALE + MP EPD + + L GC
Sbjct: 512 QYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWA 571
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+ LG++ + + L P Y+L+ NLY++ G+W VR+LM +R L K CS
Sbjct: 572 HCDLKLGKIAAENLFRLDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCS 631
Query: 673 LVDL 676
+ +
Sbjct: 632 WISV 635
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 128/446 (28%), Positives = 212/446 (47%), Gaps = 30/446 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY G + VFD M + S+ ++I Y N + + + M+ +
Sbjct: 128 LLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPN 187
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ V+ +L++C ++ G ++H +++ + V T + +MY +C + ++ VFD
Sbjct: 188 SAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFD 247
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+N V+WT ++ GY Q + L LF RM VE ++ ++ C L
Sbjct: 248 GMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDM 307
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H +I+K+G E + T L+D YVKCG+I A F + + VSW+A+I G++Q
Sbjct: 308 GKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQ 367
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV- 383
SG + +K+FT + N SV A A NLNMG H I+ GL Y
Sbjct: 368 SGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYG 427
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
+A+V MY+KC + AR FE+ E D +AW +IISG V
Sbjct: 428 ESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGV 487
Query: 427 SPDAVTLVSVISACASLGAVQ-----VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
P+AVT ++V++AC+ G V +GS Y K + + + T Y++ G
Sbjct: 488 RPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDT-----YSRAGL 542
Query: 482 AQSARMVFDAMR-EKNTVTWSAMIGG 506
A + + M E + ++W +++GG
Sbjct: 543 LXEALELINRMPFEPDAMSWKSLLGG 568
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 179/364 (49%), Gaps = 11/364 (3%)
Query: 66 KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H+ +I L N T + +MY G ++ A+ VFD M + ++ ++ Y
Sbjct: 208 KQMHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQA 267
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VL 183
+ +E + M E D FVFS VLK CC L D D G ++H IVK+G V
Sbjct: 268 KKLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVG 327
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T LVD Y KC DI S+ + F + N VSW+++I+G+ Q+ ++ + +F +R V
Sbjct: 328 TPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVV 387
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N S+ ACA L+ G HG +K G+ + +A++ MY KCG + AR
Sbjct: 388 LNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRA 447
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG-- 361
F+ + D V+WTA+I GY G +AL F + PN VT +VL+A + G
Sbjct: 448 FESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLV 507
Query: 362 ---NLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNS 417
+G M G++ ++ Y + ++D Y++ ++ +A I E D ++W S
Sbjct: 508 AEAKQYLGSMSRDYGVKPTIDHY---DCMIDTYSRAGLLXEALELINRMPFEPDAMSWKS 564
Query: 418 IISG 421
++ G
Sbjct: 565 LLGG 568
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 185/552 (33%), Positives = 297/552 (53%), Gaps = 21/552 (3%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D + V++ + + + G ++H ++ G P +F+ LV+MY+KC ++ + ++F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D +N+VSWT+MI+G QN E + F MR Q S + ACA L ++
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +H LK GI + + L DMY KCG + DA VF+E+ D VSWTAMI GY+
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
+ G ++AL F + + + S L A L GR VHS ++LG E D
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIF 243
Query: 383 VINALVDMYAKCHVIADARYIFETTSE-KDVIAWNSIISGLDDN---------------- 425
V NAL DMY+K + A +F SE ++V+++ +I G +
Sbjct: 244 VGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQ 303
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P+ T S+I ACA+ A++ G+ LHA K + +V + L++ Y KCG +
Sbjct: 304 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINF-DEDPFVSSILVDMYGKCGLLEH 362
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A FD + + + W++++ +G G G ++ F M++ V+PN + F ++L+ CSH
Sbjct: 363 AIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSH 422
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G+V EG FYSM + + VP +HY C++DLL RAGRL+EA EF+ MP EP+ +
Sbjct: 423 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 482
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
+FL C ++ ++G++ +K+++L P + VL+SN+YA++ +W V VR M+
Sbjct: 483 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 542
Query: 665 LSKSPGCSLVDL 676
+ K PG S VD+
Sbjct: 543 VKKLPGYSWVDV 554
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 250/511 (48%), Gaps = 47/511 (9%)
Query: 66 KAFHALLIVDGLTNDKCN---TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
K HALLI G T C LV+MY G + +A +FD+MP + S+ MI
Sbjct: 25 KQLHALLICAGYT--PCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLS 82
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N + + + + MR + F FS ++AC L I+ G ++HC +K G G + F
Sbjct: 83 QNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L DMY+KC + + +VF+E K+ VSWT+MI GY + +E L+ F +M +
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEE 202
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V +Q L S + AC L+A G+ +H ++K+G E + + AL DMY K G++ A
Sbjct: 203 VTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESAS 262
Query: 302 SVF--DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
+VF D C ++VS+T +I GY ++ +K L +F + + PN T +S++ A A
Sbjct: 263 NVFGIDSECR-NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACAN 321
Query: 360 LGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L G +H+ +++ ED V + LVDMY KC ++ A F+ + IAWNS+
Sbjct: 322 QAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSL 381
Query: 419 IS-----GL------------DDNVSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQG 460
+S GL D V P+A+T +S+++ C+ G V+ G ++ G
Sbjct: 382 VSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYG 441
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD------- 512
++ + + +++ + G + A+ + M E N W + +G + GD
Sbjct: 442 VVPGEEHY-SCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLA 500
Query: 513 ----------GGGSLALFSDMLNEEVQPNEV 533
G+L L S++ E Q +V
Sbjct: 501 AEKLVKLEPKNSGALVLLSNIYANERQWEDV 531
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 187/613 (30%), Positives = 313/613 (51%), Gaps = 20/613 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
NT LV+ Y G + AR VFD MP ++ MI Y +++ + ++ M++ +
Sbjct: 198 NTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGE 257
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
D F +L AC + G V I + D FV T L+ MYA+CR + Q
Sbjct: 258 RCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQ 317
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF N+++W+++I + + E L F M++ + N++T SL+
Sbjct: 318 VFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSG 377
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L + +H I + G++ + + AL+++Y +C + DAR+VFD+L +L+SW +MI
Sbjct: 378 LEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGI 437
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Y Q D AL+LF + P+ V ++L A + ++VH GL
Sbjct: 438 YVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGS 497
Query: 382 TVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD----------------- 423
++ +LV+MYAK + A I + E+ + AWN +I+G
Sbjct: 498 PLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQL 557
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ + D VT +SV++AC S ++ G +H+ + + GL S+V V AL N Y+KCG +
Sbjct: 558 EAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGL-DSDVIVKNALTNMYSKCGSME 616
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+AR +FD+M ++ V+W+ M+ Y G+ L L M E V+ N + F ++LS+CS
Sbjct: 617 NARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCS 676
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G++ EG + F+S+ D +HY C+VDLL RAG+L+EA +++ MP+EP + +
Sbjct: 677 HAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTW 736
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
+ L C + D G++ K+LEL P + V++SN+Y+ G W ++R M R
Sbjct: 737 ASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASR 796
Query: 664 GLSKSPGCSLVDL 676
+ K PG S + +
Sbjct: 797 RVKKVPGISSIQV 809
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 161/599 (26%), Positives = 281/599 (46%), Gaps = 33/599 (5%)
Query: 37 LDQTFASFHSL----PSIPCLNLLGLCKSTGSLKAF------HALLIVDGL-TNDKCNTK 85
+ A FH++ + + L+ + S GS + HAL + G N T
Sbjct: 39 FQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATA 98
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL-YKDIVEFYKCMRKRLKEH 144
L++MYG G + A+SVF+ M + ++ M+ Y L +K VE + M +
Sbjct: 99 LLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKA 158
Query: 145 DNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ F VL + + + +G +H C D FV T LV+ Y KC + +R+VF
Sbjct: 159 NVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVF 218
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D ++V +W SMI+ Y ++ + E +F RM++ +++T S++ AC L
Sbjct: 219 DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQ 278
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK + I + E++ + TAL+ MY +C + DA VF + +L++W+A+I +
Sbjct: 279 HGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFA 338
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
G+ +AL+ F + PN VT S+L+ L +H L GL+D T
Sbjct: 339 DHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTT 398
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSII------SGLDD-----------N 425
+ NALV++Y +C DAR +F+ ++I+WNS+I DD
Sbjct: 399 MRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQG 458
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD V ++++ AC + +H + GL S + V T+L+N YAK G+ A
Sbjct: 459 IQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPL-VQTSLVNMYAKAGELDVA 517
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
++ M E+ W+ +I GY + G +L + + E + ++V F ++L+AC+ +
Sbjct: 518 EVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSS 577
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+ EG K +S + + + ++ ++ G +E A ++MPI VS G
Sbjct: 578 TSLAEG-KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNG 635
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 188/373 (50%), Gaps = 22/373 (5%)
Query: 189 MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT 248
MY++C +G + F + +NVVSW MI+ Y QE L LF+ M V N IT
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L +++ +C R L G +H L+ G N+ + TALL+MY KCG + DA+SVF+E+
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 309 SIDLVSWTAMIVGYTQSGYPDK-ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
++V+W AM+ Y+ G K A++LFT N +T +VL++ L G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 368 MVHSLGIRLGLE--DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--- 422
+HS +R D V ALV+ Y KC + DAR +F+ + V WNS+IS
Sbjct: 181 FIHSC-VRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239
Query: 423 --------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ D VT +S++ AC + +Q G + S + +++V
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRE-SISETSFELDLFV 298
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
GTAL+ YA+C + A VF M++ N +TWSA+I + G G +L F M E +
Sbjct: 299 GTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGI 358
Query: 529 QPNEVIFTTILSA 541
PN V F ++L+
Sbjct: 359 LPNRVTFISLLNG 371
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y++CG A F +R +N V+W+ MI Y +LALF ML E V PN +
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+L++C + +G +++ + F + ++++ + G L +A E M
Sbjct: 61 LVAVLNSCGSFRELRDGI-LVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEM 119
Query: 595 PIEPDVSLFGAFLHGCGLYS 614
E +V + A L G+YS
Sbjct: 120 A-EKNVVTWNAML---GVYS 135
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 187/618 (30%), Positives = 322/618 (52%), Gaps = 28/618 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++ Y G AR + D MP + SF ++I Y L +E R+ + D
Sbjct: 49 LLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVD 108
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F ++ L AC + G VH + G FV LV MY+KC ++G +R+VFD
Sbjct: 109 RFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFD 168
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR--AL 262
+++ VSW S+++GYV+ +E + +F MR G + N LGS++ C+ +
Sbjct: 169 VAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTM 228
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+ +HG ++K G++ + LV+A++DMY K G + +A ++F + ++V + MI G+
Sbjct: 229 DIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGF 288
Query: 323 TQSG------YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++ +AL L+++ + P T +SVL A G L G+ +H I+
Sbjct: 289 CRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKY 348
Query: 377 GL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
ED + +AL+D+Y + D F ++ + D++ W +++SG N
Sbjct: 349 TFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLF 408
Query: 426 -------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ PD T+ SV++ACASL + G + ++TK G V +G + ++ YA+
Sbjct: 409 HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTV-MGNSCVHMYAR 467
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
GD +A F M + V+WSA+I + G +L F +M++ +V PNE+ F +
Sbjct: 468 SGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGV 527
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L+ACSH G+V EG + + +M +D+ P++KH C+VDLL RAGRL +A F+ N
Sbjct: 528 LTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHA 587
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
D ++ + L C ++ + G+++ +++EL P + YV++ N+Y G ++ R+
Sbjct: 588 DPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRD 647
Query: 659 LMKQRGLSKSPGCSLVDL 676
LMKQRG+ K PG S ++L
Sbjct: 648 LMKQRGVKKEPGLSWIEL 665
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 310/549 (56%), Gaps = 22/549 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
++S +++ C ++ I + K+ +K G S L+D Y KC + +R+VFDE
Sbjct: 79 LYSSLIQQCIGIKSITDITKIQSHALKRGFHHSLG-NKLIDAYLKCGSVVYARKVFDEVP 137
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+++V+W SMIA Y++N ++E + ++ RM + ++ T S+ A + L +H+G+
Sbjct: 138 HRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQR 197
Query: 268 LHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
HG + +G+ +++ V +AL+DMY K G +RDAR V D++ D+V +TA+IVGY+ G
Sbjct: 198 AHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 257
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN- 385
++L++F + N T++SVL L +L GR++H L ++ GLE
Sbjct: 258 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQT 317
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSP 428
+L+ MY +C ++ D+ +F+ + + W S+I GL N ++P
Sbjct: 318 SLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITP 377
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
++ TL SV+ AC+SL ++ G +HA K GL + YVG AL++FY KCG + AR V
Sbjct: 378 NSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGL-DIDKYVGAALIDFYGKCGSTEIARSV 436
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+ + E + V+ ++MI Y G G +L LFS M + ++PN V + +LSAC++ G++
Sbjct: 437 FNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLL 496
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
EG F S + HY CMVDLL RAGRL+EA E + N DV ++ L
Sbjct: 497 EEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEA-EMLINQVNISDVVIWRTLLS 555
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C ++ ++ + ++ ++++L P+ +VL+SNLYAS G W +V +++ M++ L K+
Sbjct: 556 ACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKN 615
Query: 669 PGCSLVDLD 677
P S VD++
Sbjct: 616 PAMSWVDVE 624
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 229/449 (51%), Gaps = 20/449 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
KL+ Y G V YAR VFD +P+ ++ MI Y N K+ ++ Y+ M
Sbjct: 114 NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGIL 173
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCE--IVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
D F FS V KA +L + EG + H + ++ VG + FV + LVDMYAK + +R
Sbjct: 174 PDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDARL 233
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
V D+ + K+VV +T++I GY + E L +F M + +E N+ TL S++ C L
Sbjct: 234 VSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLED 293
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G+ +HG I+K G+E T+LL MY +CG + D+ VF + + + V+WT++IVG
Sbjct: 294 LTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVG 353
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Q+G + AL F + PN T++SVL A + L L G+ +H++ ++ GL+ D
Sbjct: 354 LVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDID 413
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII----------------SGLDD 424
V AL+D Y KC AR +F E DV++ NS+I SG+ D
Sbjct: 414 KYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKD 473
Query: 425 N-VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ P+ VT + V+SAC + G ++ G + + + G + +++ + G +
Sbjct: 474 TGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLK 533
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGD 512
A M+ + + + V W ++ + GD
Sbjct: 534 EAEMLINQVNISDVVIWRTLLSACRIHGD 562
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 184/352 (52%), Gaps = 9/352 (2%)
Query: 76 GLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK 135
G++N + LV MY FG ++ AR V D + D F +I Y + + ++ ++
Sbjct: 208 GVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFR 267
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV-LTGLVDMYAKCR 194
M K+ E + + S VL C L D+ G +H IVK G + T L+ MY +C
Sbjct: 268 NMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCG 327
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
+ S +VF + ++ N V+WTS+I G VQN + L+ F +M + N TL S++
Sbjct: 328 LVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLR 387
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
AC+ L L QGK +H ++K G++I+ ++ AL+D Y KCG+ ARSVF+ L +D+VS
Sbjct: 388 ACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVS 447
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV----- 369
+MI Y Q+G+ +AL+LF+ K PN+VT VLSA G L G +
Sbjct: 448 VNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSAR 507
Query: 370 HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
+S I L + Y +VD+ + + +A + + DV+ W +++S
Sbjct: 508 NSGNIELTKDHYA---CMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSA 556
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 172/488 (35%), Positives = 284/488 (58%), Gaps = 20/488 (4%)
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKW 267
++ S+ +I +++ ++ L LF M + V +Q T+ + V +C+++ L G+
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+ Y K G ++ ++ +L+ MY CG++ A +F + +++W AMI GY ++G
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINA 386
+ +++F + VT+ SV +A +LG+ N+G+ + G L + A
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATA 312
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
LVDMYAKC + AR +F+ +DV+AW+++ISG + V+P+
Sbjct: 313 LVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPN 372
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
VT+VSV+SACA LGA++ G +H+Y ++ L V +GTAL++FYAKCG + A F
Sbjct: 373 DVTMVSVLSACAVLGALETGKWVHSYIRRKDL-PLTVILGTALVDFYAKCGCIKDAVKAF 431
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
++M +NT TW+A+I G G +L LFS ML ++P +V F +L ACSH +V
Sbjct: 432 ESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVE 491
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG + F SM +D+ P ++HY CMVDLL RAG ++EA +F+ NMPIEP+ ++ A L
Sbjct: 492 EGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSA 551
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C ++ ++GE +K+++ L P + Y+L+SN YAS G+W VR+ MK++G+ K P
Sbjct: 552 CTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIP 611
Query: 670 GCSLVDLD 677
GCSL++L+
Sbjct: 612 GCSLIELE 619
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 216/439 (49%), Gaps = 25/439 (5%)
Query: 92 SFGHVKYARSVFDSMPNP--DFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFV 148
S H+ YA +F P+P S+ ++IR + +D + F + + D
Sbjct: 114 SSAHLSYAIRLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHT 173
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ +K+C + D+ G V K G D FVL L+ MYA C D+ ++ +F
Sbjct: 174 VANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQ 233
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
K V++W +MIAGYV+N +E + +F M E +++TL S+ TAC +L + G+W
Sbjct: 234 VKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQW 293
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+ Y + G+ + +L TAL+DMY KCG + AR +FD + S D+V+W+AMI GYTQS
Sbjct: 294 IAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDR 353
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI--N 385
+AL +F + + + PN VT+ SVLSA A LG L G+ VHS IR TVI
Sbjct: 354 CREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSY-IRRKDLPLTVILGT 412
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSP 428
ALVD YAKC I DA FE+ ++ W ++I G L+ N+ P
Sbjct: 413 ALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEP 472
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
VT + V+ AC+ V+ G T+ + + +++ + G A
Sbjct: 473 TDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQF 532
Query: 489 FDAMR-EKNTVTWSAMIGG 506
M E N V W A++
Sbjct: 533 IRNMPIEPNAVVWRALLSA 551
>gi|302774729|ref|XP_002970781.1| hypothetical protein SELMODRAFT_11658 [Selaginella moellendorffii]
gi|300161492|gb|EFJ28107.1| hypothetical protein SELMODRAFT_11658 [Selaginella moellendorffii]
Length = 517
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 287/520 (55%), Gaps = 26/520 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGL-VDMYAKCRDIGSSRQVFDETL 207
++ +L+ C + R + G ++H +I++ +L L V MY +C + +R +FD+T
Sbjct: 1 YAPLLRQCSKQRSLHSGRRLHAQILRHRLDRHTLLCNLLVQMYGRCGCLDEARSIFDKTP 60
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG-NQITLGSLVTACAKLRALHQGK 266
++N+ SW+ MIA Y QN L ++ M + + + T S ++AC+ L L GK
Sbjct: 61 ERNLFSWSIMIAAYAQNGHPTFALAVYREMLQRSIHAIDSTTYVSALSACSALGDLETGK 120
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+H IL +EI++ L TAL+ MY KCG + +A FD + D+V W AMI + Q+G
Sbjct: 121 SIHERILSSKLEIDAFLGTALISMYSKCGCLEEAHECFDCVLRKDIVVWNAMIAAFAQNG 180
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL-----GIRLGLEDY 381
+P +AL F + PN++T+ S L A + L L GR +H+L + LG
Sbjct: 181 HPQRALNFFHAIPRGELQPNNLTLVSALDACSDLAALEEGRKIHALIESSPELTLG---G 237
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------VS 427
++ NALV++Y KC DAR +F+ + V++W S+I+ N ++
Sbjct: 238 SMGNALVNLYGKCGRAIDARAVFDALRPRTVVSWTSMIAAYAQNGHSDQALELFQRMDMA 297
Query: 428 PDAVTLVSVISACAS-LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
P+ VTL+SV+ AC+ G ++HA+ G S + + +AL+N Y K G+ SA
Sbjct: 298 PNGVTLLSVLQACSEHRKGSHAGKTIHAHIRLAGFDGSPL-LDSALVNMYGKVGNLDSAM 356
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+VF MRE++ +TW+AMI Y G +L+LFS ML + + + V + SACSH+G
Sbjct: 357 VVFTQMRERDAITWTAMISSYAQHGHSRQALSLFSSMLLDGIATDAVTLACVSSACSHSG 416
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
V GW F S RDF P+ +HYV M D+L+RAGRL+EA + + +MP +PD+ +
Sbjct: 417 DVKLGWDYFVSSVRDFGERPTFEHYVVMSDMLSRAGRLQEAEDLLRSMPFQPDLVSWRTL 476
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
L C ++ +G+ + ++LEL P VL+SN+Y++
Sbjct: 477 LSACSNHNNPHVGKRVADRILELSPSDPAALVLLSNIYSA 516
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 218/424 (51%), Gaps = 30/424 (7%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPN 108
P L +S S + HA ++ L CN LV MYG G + ARS+FD P
Sbjct: 3 PLLRQCSKQRSLHSGRRLHAQILRHRLDRHTLLCNL-LVQMYGRCGCLDEARSIFDKTPE 61
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR-LKEHDNFVFSKVLKACCELRDIDEGMK 167
+ +S+ +MI Y N + Y+ M +R + D+ + L AC L D++ G
Sbjct: 62 RNLFSWSIMIAAYAQNGHPTFALAVYREMLQRSIHAIDSTTYVSALSACSALGDLETGKS 121
Query: 168 VHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I+ D+F+ T L+ MY+KC + + + FD L K++V W +MIA + QN
Sbjct: 122 IHERILSSKLEIDAFLGTALISMYSKCGCLEEAHECFDCVLRKDIVVWNAMIAAFAQNGH 181
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI-LKIGIEINSHLVT 285
Q L F+ + G ++ N +TL S + AC+ L AL +G+ +H I + + +
Sbjct: 182 PQRALNFFHAIPRGELQPNNLTLVSALDACSDLAALEEGRKIHALIESSPELTLGGSMGN 241
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+++Y KCG DAR+VFD L +VSWT+MI Y Q+G+ D+AL+LF + D P
Sbjct: 242 ALVNLYGKCGRAIDARAVFDALRPRTVVSWTSMIAAYAQNGHSDQALELF---QRMDMAP 298
Query: 346 NHVTIASVLSA-SAQLGNLNMGRMVHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARY 402
N VT+ SVL A S + G+ +H+ IRL D + + +ALV+MY K + A
Sbjct: 299 NGVTLLSVLQACSEHRKGSHAGKTIHA-HIRLAGFDGSPLLDSALVNMYGKVGNLDSAMV 357
Query: 403 IFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
+F E+D I W ++IS L D ++ DAVTL V SAC+ G
Sbjct: 358 VFTQMRERDAITWTAMISSYAQHGHSRQALSLFSSMLLDGIATDAVTLACVSSACSHSGD 417
Query: 446 VQVG 449
V++G
Sbjct: 418 VKLG 421
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 200/402 (49%), Gaps = 25/402 (6%)
Query: 43 SFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKY 98
S H++ S ++ L C + G L K+ H ++ L D T L+SMY G ++
Sbjct: 94 SIHAIDSTTYVSALSACSALGDLETGKSIHERILSSKLEIDAFLGTALISMYSKCGCLEE 153
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A FD + D + MI + N + + F+ + + + +N L AC +
Sbjct: 154 AHECFDCVLRKDIVVWNAMIAAFAQNGHPQRALNFFHAIPRGELQPNNLTLVSALDACSD 213
Query: 159 LRDIDEGMKVHCEI-----VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS 213
L ++EG K+H I + +GG + LV++Y KC +R VFD + VVS
Sbjct: 214 LAALEEGRKIHALIESSPELTLGGS---MGNALVNLYGKCGRAIDARAVFDALRPRTVVS 270
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR-ALHQGKWLHGYI 272
WTSMIA Y QN + + L LF RM + N +TL S++ AC++ R H GK +H +I
Sbjct: 271 WTSMIAAYAQNGHSDQALELFQRMD---MAPNGVTLLSVLQACSEHRKGSHAGKTIHAHI 327
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
G + + L +AL++MY K GN+ A VF ++ D ++WTAMI Y Q G+ +AL
Sbjct: 328 RLAGFDGSPLLDSALVNMYGKVGNLDSAMVVFTQMRERDAITWTAMISSYAQHGHSRQAL 387
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINAL 387
LF+ + VT+A V SA + G++ +G V G R E Y V++
Sbjct: 388 SLFSSMLLDGIATDAVTLACVSSACSHSGDVKLGWDYFVSSVRDFGERPTFEHYVVMS-- 445
Query: 388 VDMYAKCHVIADARYIFETTS-EKDVIAWNSIISGLDDNVSP 428
DM ++ + +A + + + D+++W +++S ++ +P
Sbjct: 446 -DMLSRAGRLQEAEDLLRSMPFQPDLVSWRTLLSACSNHNNP 486
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/522 (34%), Positives = 288/522 (55%), Gaps = 31/522 (5%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D + +V K D + V ++ + S+ ++++ Y D + + ++
Sbjct: 37 DELFINKVVTFLGKSADFATYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRMTIFVYRV 96
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+ T + AC K + +GK +HG + K+G + ++ +L+ Y CG
Sbjct: 97 FVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGTVTKMGFYDDIYVQNSLVHFYGVCGE 156
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
R+A VFD++ D+VSWT +I G+T++G +AL F+ D PN T L +
Sbjct: 157 SRNACKVFDQMPVRDVVSWTGIITGFTRTGLYKEALDTFSK---MDVEPNLATYVCALVS 213
Query: 357 SAQLGNLNMGRMVHSLGI-RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
S ++G L++G+ +H L + R L NAL+DMY KC ++DA +F +KD ++W
Sbjct: 214 SGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSW 273
Query: 416 NSIISGL------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
NS+ISGL + PD L SV+SACASLGAV G +H Y
Sbjct: 274 NSMISGLVHCERSNEAIELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVL 333
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
G+ + ++GTA+++ YAKCG ++A +F+ +R KN TW+A++GG + G G SL
Sbjct: 334 SAGI-KWDTHIGTAIVDMYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESL 392
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM-CRDFKFVPSMKHYVCMVD 576
F +M+ +PN V F IL+AC HTG+V EG + F+ M R++ P ++HY C++D
Sbjct: 393 RYFEEMVKLGFKPNLVTFLAILNACCHTGLVDEGRRYFHKMKTREYNLSPKLEHYGCLID 452
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV---MIKKMLELHPDK 633
L RAG L+EALE ++ MP++PDV + GA L C SR L E+ ++ LE+ +
Sbjct: 453 LFCRAGLLDEALELIKAMPVKPDVRICGAVLSACK--SRGTLMELPKEILDSFLEMEFED 510
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+ YVL+SN++A++ RW V+++R LMK +G+SK PG S ++
Sbjct: 511 SGVYVLLSNIFAANRRWDDVSRIRRLMKVKGISKVPGSSSIE 552
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 141/470 (30%), Positives = 222/470 (47%), Gaps = 27/470 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIV-DGLTNDKCNTKLVSMYG-SFGHVKYARSVFDSMPNP- 109
L L+ C S K LI D L ++ K+V+ G S Y+ + S+ +
Sbjct: 10 LELISRCSSLRVFKQIQTQLISRDILRDELFINKVVTFLGKSADFATYSSVILHSIRSVL 69
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+S+ ++ Y + D + + Y+ D F F V KAC + I EG ++H
Sbjct: 70 SSFSYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 170 CEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ K+G D +V LV Y C + ++ +VFD+ ++VVSWT +I G+ + +
Sbjct: 130 GTVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIITGFTRTGLYK 189
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E L F++M VE N T + + ++ L GK +HG ILK I+ AL+
Sbjct: 190 EALDTFSKMD---VEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD-FFPNH 347
DMYVKC + DA +VF EL D VSW +MI G ++A++LF+ + + P+
Sbjct: 247 DMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGIKPDG 306
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
+ SVLSA A LG ++ GR VH + G++ D + A+VDMYAKC I A IF
Sbjct: 307 HILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALKIFNG 366
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
K+V WN+++ GL + P+ VT +++++AC G V G
Sbjct: 367 IRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNACCHTGLVDEG 426
Query: 450 SS-LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
H T++ LS + L++ + + G A + AM K V
Sbjct: 427 RRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAMPVKPDV 476
>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 757
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 205/638 (32%), Positives = 347/638 (54%), Gaps = 31/638 (4%)
Query: 66 KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA LI + +++ Y G + A SVFDSM + D S+ V+I
Sbjct: 84 KCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLD- 142
Query: 125 DLYKDIVE-FYKCMRKRLKEHDNFVFSKVL--KACCELRDIDEGMKVHCEIVKVGGPDSF 181
Y +VE ++ + R+ + + + VL +AC LR EG+++H +++ G S+
Sbjct: 143 --YGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASW 200
Query: 182 -VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-RE 239
V + MYA D+ +R +FDE +K+V+SW++MI GYVQ Q GL +F +M
Sbjct: 201 SVQNSFLCMYADV-DMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLST 259
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
+ + + L S++ ACA + G+ +HG + G++ + + +L+DMY KC +
Sbjct: 260 SRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLDSDLFVKNSLIDMYSKCKDAGS 319
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A VF E+ + VSW +++ G + +AL L + + VT+ + L
Sbjct: 320 AFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKY 379
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+ + VH IR G E + V+N+L+D YAKC++I A +F T +DV+ W+++
Sbjct: 380 FAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLWSTM 439
Query: 419 ISGL------DDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I+G D+ ++ P+AVT+++++ AC+ ++ H + ++GL
Sbjct: 440 IAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIRRGL 499
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
++ V VGTA+++ Y+KCG+ +++R F+ + +KN +TWS MI YGM G +LAL +
Sbjct: 500 -AAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALALLA 558
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
M + E++PN + + ++L+ACSH G+V G F SM +D P +HY CMVD+L+RA
Sbjct: 559 QMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLSRA 618
Query: 582 GRLEEALEFMENMP--IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
G+L++A+E + MP S++GA L C Y LGE + ++LEL P Y+L
Sbjct: 619 GKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELEPLNLAGYLL 678
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
S++YASDG W +++ L ++RG+ G S+V +D
Sbjct: 679 ASSMYASDGLWDNAARMKLLARERGVRAVAGYSIVHVD 716
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 205/442 (46%), Gaps = 31/442 (7%)
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN--QITL-GSLVTACAKLRALHQGKW 267
++SWT I N+ E + + + + + +TL ++ AC+ L + GK
Sbjct: 27 LLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVLKACSYLSYI-DGKC 85
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
LH ++K + + + ++L+ Y+KCG + A SVFD + S D VSW +I G G
Sbjct: 86 LHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHGCLDYGA 145
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINA 386
+ L F + + A F PN T+ ++ A L G +H I+ GL ++V N+
Sbjct: 146 LVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWASWSVQNS 205
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----LDDN--------------VSP 428
+ MYA + AR +F+ EKDVI+W+++I G L+D ++P
Sbjct: 206 FLCMYADVDMDC-ARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLSTSRITP 264
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D V LVSV+ ACA+ + +G +H + +G L S+++V +L++ Y+KC DA SA V
Sbjct: 265 DGVILVSVLKACANSVNITMGRLVHGLTICRG-LDSDLFVKNSLIDMYSKCKDAGSAFEV 323
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F M +N V+W++++ G + +L L M E ++ +EV L C +
Sbjct: 324 FSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQICKY---F 380
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+ C C + V ++D A+ +E A E DV L+
Sbjct: 381 AHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTR-RRDVVLWSTM 439
Query: 607 LHGCGLYSRFDLGEVMIKKMLE 628
+ G + D + +KM E
Sbjct: 440 IAGFAHCGKPDEAIAVFQKMNE 461
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 184/608 (30%), Positives = 300/608 (49%), Gaps = 83/608 (13%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
++ LK CCE R+ + K+HC I++ + P++F+ L++ Y K D+ ++R VFD
Sbjct: 8 YTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIP 67
Query: 208 DKN-------------------------------VVSWTSMIAGYVQNDCAQEGLVLFNR 236
N VVSW S+++GY N E + ++N
Sbjct: 68 QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNM 127
Query: 237 M-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
M ++G V N+IT +++ + + G+ +HG I K G + + + L+DMY K G
Sbjct: 128 MLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTG 187
Query: 296 NIRDARSVFDEL-----------------CSI--------------DLVSWTAMIVGYTQ 324
I DA +F+E+ C D +SWT +I G TQ
Sbjct: 188 FINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQ 247
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+G +A+ F + F + T SVL+A L+ G+ +H+ IR +D +
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+AL+DMY KC + A +F K+VI+W +++ G N +
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEI 367
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD TL SVIS+CA+L +++ G+ H + GL+ V V AL+ Y KCG + A
Sbjct: 368 HPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICF-VTVSNALITLYGKCGSLEHAH 426
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F M+ ++ V+W+A++ GY G +++LF ML + P+ V F +LSACS G
Sbjct: 427 QLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAG 486
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V +G+ F M ++ + P HY CM+DLL+RAGRLEEA F+ MP PD +
Sbjct: 487 LVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATL 546
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C L ++G+ + + +L P Y+L+S++YA+ G+W V ++R+ M++ G+
Sbjct: 547 LSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVK 606
Query: 667 KSPGCSLV 674
K PG S +
Sbjct: 607 KEPGHSWI 614
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 238/480 (49%), Gaps = 54/480 (11%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S Y G+++ + VFDSMPN D S+ ++ Y N L + V Y M K +
Sbjct: 77 LLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNL 136
Query: 146 NFV-FSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAK----------- 192
N + FS +L +D G ++H +I K G FV + LVDMYAK
Sbjct: 137 NRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIF 196
Query: 193 --------------------CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
CR I + Q+FD +K+ +SWT++I G QN +E +
Sbjct: 197 EEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVD 256
Query: 233 LFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
F M EGF +Q T GS++TAC AL +GK +H YI++ + N + +ALLDMY
Sbjct: 257 KFKEMGIEGFCM-DQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMY 315
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
KC N++ A +VF ++ +++SWTAM+VGY Q+GY ++A+++F D + + P+ T+
Sbjct: 316 CKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLG 375
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSEK 410
SV+S+ A L +L G H + GL + TV NAL+ +Y KC + A +F +
Sbjct: 376 SVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIR 435
Query: 411 DVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
D ++W +++SG L + PD VT V V+SAC+ G V+ G
Sbjct: 436 DEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYF 495
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
K+ ++ T +++ ++ G + A+ + M + + W+ ++ + G+
Sbjct: 496 ECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGN 555
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 193/402 (48%), Gaps = 28/402 (6%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A +FD+MP D S+ +I N L+K+ V+ +K M D F F VL AC
Sbjct: 223 AEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGG 282
Query: 159 LRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
+DEG ++H I++ D+ FV + L+DMY KCR++ + VF + KNV+SWT+M
Sbjct: 283 FLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAM 342
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
+ GY QN ++E + +F M+ + + TLGS++++CA L +L +G HG L G+
Sbjct: 343 LVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGL 402
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
+ AL+ +Y KCG++ A +F E+ D VSWTA++ GY Q G ++ + LF
Sbjct: 403 ICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFET 462
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYA 392
P+ VT VLSA ++ G + G MV I + YT ++D+ +
Sbjct: 463 MLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYT---CMIDLLS 519
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSL 452
+ + +A+ SPDA+ +++S+C G +++G
Sbjct: 520 RAGRLEEAKNFINQMP-----------------FSPDAIGWATLLSSCRLNGNLEIGK-- 560
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
A + L N L + YA G + MRE
Sbjct: 561 WAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMRE 602
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 125/259 (48%), Gaps = 6/259 (2%)
Query: 66 KAFHALLI-VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA +I D N + L+ MY +VKYA +VF M + + S+ M+ Y N
Sbjct: 290 KQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQN 349
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL- 183
++ V + M++ D+F V+ +C L ++EG + H + + G FV
Sbjct: 350 GYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQAL-ASGLICFVTV 408
Query: 184 -TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
L+ +Y KC + + Q+F E ++ VSWT++++GY Q A E + LF M +
Sbjct: 409 SNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGI 468
Query: 243 EGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ +T +++AC++ + +G + + + I T ++D+ + G + +A+
Sbjct: 469 VPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAK 528
Query: 302 SVFDELC-SIDLVSWTAMI 319
+ +++ S D + W ++
Sbjct: 529 NFINQMPFSPDAIGWATLL 547
>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 874
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 203/647 (31%), Positives = 335/647 (51%), Gaps = 28/647 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCN--TKLVSMYGSFGHVKYARSVFDSMPNPD 110
L + GL S + H L + G + T LV MY G V+ R VF+ MP +
Sbjct: 106 LKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRN 165
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
++ ++ Y D++ + MR + F F+ VL A +D G +VH
Sbjct: 166 VVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHA 225
Query: 171 EIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+ VK G + FV L++MY+KC + ++ VF + +++VSW +++AG + N+ E
Sbjct: 226 QSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLE 285
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L LF+ R + +Q T +++ CA L+ L + LH +LK G + +++TA++D
Sbjct: 286 ALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMD 345
Query: 290 MYVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
Y KCG + DA ++F + S ++VSWTAMI G Q+ A LF+ + + PN
Sbjct: 346 AYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEF 405
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETT 407
T ++VL+AS + + +H+ I+ + +V AL+ Y+K +A IF+
Sbjct: 406 TYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMI 461
Query: 408 SEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGA-VQVG 449
KDV+AW++++S + P+ T+ S I ACAS A + G
Sbjct: 462 DHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQG 521
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
HA S K + + VG+AL+ YA+ G SAR+VF+ +++ V+W++MI GY
Sbjct: 522 RQFHAISIKYRYQDA-ICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQ 580
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G +L F M ++ + F ++ C+H G+V EG + F SM D P+M+
Sbjct: 581 HGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTME 640
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVDL +RAG+L+E + +E MP ++ L C ++ +LG++ +K+L L
Sbjct: 641 HYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLL 700
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
PD + YVL+SN+YA+ GRW ++VR+LM + + K GCS + +
Sbjct: 701 EPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQI 747
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 163/556 (29%), Positives = 269/556 (48%), Gaps = 51/556 (9%)
Query: 63 GSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY----SFQVMI 118
GSLK AL L +D +T + AR D MP+ D S V I
Sbjct: 21 GSLKPLSALASAARLEDDCADT---------CNAPGARQALDGMPSRDAAAGSSSNPVAI 71
Query: 119 -----RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
R + V+ ++C R + S+VLK C + D G ++HC V
Sbjct: 72 VDYGRRGKGRGEALDHFVDVHRCGRVQ-----GAAVSRVLKVCGLIPDRVSGEQLHCLCV 126
Query: 174 KVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
K G + V T LVDMY KC + R VF+ +NVV+WTS++ GYVQ + +
Sbjct: 127 KCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVM 186
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
LF RMR V N T S+++A A A+ G+ +H +K G + +L++MY
Sbjct: 187 ALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMY 246
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
KCG + +A++VF ++ + D+VSW ++ G + + +AL+LF D + + + T +
Sbjct: 247 SKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYS 306
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF-ETTSE 409
+V+ A L L + R +HS ++ G D V+ A++D Y+KC + DA IF
Sbjct: 307 TVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGS 366
Query: 410 KDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSL 452
++V++W ++I G +DNV P+ T +V++A + Q+
Sbjct: 367 QNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQI---- 422
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
HA K + VGTALL Y+K G+ + A +F + K+ V WSAM+ Y GD
Sbjct: 423 HAQIIKTNYQHAP-SVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGD 481
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSAC-SHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G+ +F M + ++PNE ++ + AC S T + +G + F+++ +++ ++
Sbjct: 482 CDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQ-FHAISIKYRYQDAICVG 540
Query: 572 VCMVDLLARAGRLEEA 587
+V + AR G ++ A
Sbjct: 541 SALVTMYARKGSIDSA 556
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V+ C + G LH K G + V VGTAL++ Y KCG + R+VF+ M ++
Sbjct: 105 VLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKR 164
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
N VTW++++ GY +ALF M E V PN FT++LSA + G V G +
Sbjct: 165 NVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVH 224
Query: 556 YSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVS 601
+ KF +VC ++++ ++ G +EEA M VS
Sbjct: 225 ---AQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVS 269
>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 653
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 313/593 (52%), Gaps = 28/593 (4%)
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
NPD F + L LY + + KR + H+ L+ C + +D G +
Sbjct: 24 NPDL--FAAIKPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQ 81
Query: 168 VHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+H +V+ G D G LV+MYAKC + + VF + +++V + ++I+G+V N
Sbjct: 82 IHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNG 140
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ + + MR + ++ T SL+ + L K +HG K+G + + ++ +
Sbjct: 141 SPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGFDSDCYVGS 199
Query: 286 ALLDMYVKCGNIRDARSVFDELCSID-LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
L+ Y K ++ DA+ VFDEL D V W A++ GY+Q + AL +F+ +
Sbjct: 200 GLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVG 259
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYI 403
+ TI SVLSA G+++ GR +H L ++ G D V NAL+DMY K + +A I
Sbjct: 260 VSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSI 319
Query: 404 FETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAV 446
FE E+D+ WNS++ D + PD VTL +V+ C L ++
Sbjct: 320 FEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASL 379
Query: 447 QVGSSLHAYSTKQGLL---SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
+ G +H Y GLL SSN ++ +L++ Y KCGD + ARMVFD+MR K++ +W+ M
Sbjct: 380 RQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIM 439
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I GYG+Q G +L +FS M V+P+E+ F +L ACSH+G + EG M +
Sbjct: 440 INGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYN 499
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+P+ HY C++D+L RA +LEEA E + PI + ++ + L C L+ DL V
Sbjct: 500 ILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAG 559
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
K++ EL P+ YVL+SN+Y G++ V VR+ M+Q+ + K+PGCS + L
Sbjct: 560 KRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVL 612
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 202/458 (44%), Gaps = 62/458 (13%)
Query: 65 LKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+K H L G +D + LV+ Y F V+ A+ VFD +P+ D + W L
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD-----DSVLWNAL 233
Query: 124 NDLYKDIVEF------YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
+ Y I F + MR+ + VL A DID G +H VK G
Sbjct: 234 VNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS 293
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG--LVLF 234
G D V L+DMY K + + + +F+ ++++ +W S++ V + C L LF
Sbjct: 294 GSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC--VHDYCGDHDGTLALF 351
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI----EINSHLVTALLDM 290
RM + + +TL +++ C +L +L QG+ +HGY++ G+ N + +L+DM
Sbjct: 352 ERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDM 411
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
YVKCG++RDAR VFD + D SW MI GY + AL +F+ A P+ +T
Sbjct: 412 YVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITF 471
Query: 351 ASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFE 405
+L A + G LN GR M I + Y + +DM + + +A +E
Sbjct: 472 VGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACV---IDMLGRADKLEEA---YE 525
Query: 406 TTSEKDV----IAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG- 460
K + + W SI+S + + D A+ G LH +
Sbjct: 526 LAISKPICDNPVVWRSILSSCRLHGNKDL--------------ALVAGKRLHELEPEHCG 571
Query: 461 --LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+L SNVYV + G + V DAMR++N
Sbjct: 572 GYVLMSNVYV---------EAGKYEEVLDVRDAMRQQN 600
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 18/220 (8%)
Query: 38 DQTFASFHSL------PSIPCLN-LLGLCKSTGSLK---AFHALLIVDGLTNDKCNTK-- 85
D T A F + P I L +L C SL+ H +IV GL N K + +
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI 404
Query: 86 ---LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
L+ MY G ++ AR VFDSM D S+ +MI Y + + ++ + CM +
Sbjct: 405 HNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGV 464
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSR 200
+ D F +L+AC ++EG ++ V P S ++DM + + +
Sbjct: 465 KPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAY 524
Query: 201 QV-FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
++ + + N V W S+++ + LV R+ E
Sbjct: 525 ELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHE 564
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 316/593 (53%), Gaps = 29/593 (4%)
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
NPDF++ I LY + + KR + H+ L+ C + +D G +
Sbjct: 24 NPDFFA---AINPSTFASLYSTVSGQIEEHPKRYEHHNVATSIATLQRCAQRKDSVSGQQ 80
Query: 168 VHCEIVKVGGPDSF--VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+H +V+ G D +T LV+MYAKC + + VF + +++V + ++I+G+V N
Sbjct: 81 IHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNG 139
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ + ++ MR + ++ T SL+ + + K +H K+G + ++ +
Sbjct: 140 SPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAME-VSDVKKVHALAFKLGFVSDCYVGS 198
Query: 286 ALLDMYVKCGNIRDARSVFDELCSID-LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+ Y K ++ DA+ VFDEL D V W A++ GY+ + AL +F+ +
Sbjct: 199 ALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDALIVFSKMREEGVA 258
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYI 403
+ TI SVLS+ G+L+ GR +H L +++G + V+ NAL+D+Y K + +A I
Sbjct: 259 MSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEANSI 318
Query: 404 FETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAV 446
FE E+D+ WNS++ D + PD VTL +V+ C L ++
Sbjct: 319 FEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASL 378
Query: 447 QVGSSLHAYSTKQGLL---SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
+ G +H Y GLL SSN ++ +L++ Y KCGD + ARMVFD+MR K++ +W+ M
Sbjct: 379 KQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIM 438
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I GYG+Q G +L +FS M V+P+E+ F +L ACSH+G V EG M +
Sbjct: 439 INGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETLYN 498
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+P+ HY C++D+L RA +LEEA + +MPI + ++ + L C L+ DL V
Sbjct: 499 ILPTSDHYACVIDMLGRADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGNKDLAVVAG 558
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
K++ EL P+ YVL+SN+Y ++ V VR+ MK++ + K+PGCS + L
Sbjct: 559 KRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKEQNVKKTPGCSWIGL 611
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 133/301 (44%), Gaps = 16/301 (5%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
++ H L + G + + L+ +YG ++ A S+F++M D +++ ++ +
Sbjct: 281 RSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYC 340
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-----GPD 179
+ + ++ M D + VL C L + +G ++H ++ G +
Sbjct: 341 GDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSN 400
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
F+ L+DMY KC D+ +R VFD K+ SW MI GY C + L +F+ M
Sbjct: 401 GFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCR 460
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
V+ ++IT L+ AC+ +++G+ +L I S ++DM + +
Sbjct: 461 AGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETLYNILPTSDHYACVIDMLGRADKLE 520
Query: 299 DARSVFDELCSIDL----VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+A +D S+ + V W +++ G +K L + K+ + P H + ++
Sbjct: 521 EA---YDLAISMPICDNPVVWRSILSSCRLHG--NKDLAVVAGKRLYELEPEHCGVYVLM 575
Query: 355 S 355
S
Sbjct: 576 S 576
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 38 DQTFASFHSL------PSIPCLN-LLGLCKSTGSLK---AFHALLIVDGLTNDKC----- 82
D T A F ++ P I L +L C SLK H +I GL N K
Sbjct: 344 DGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFI 403
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ L+ MY G ++ AR VFDSM D S+ +MI Y + + ++ + CM +
Sbjct: 404 HNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGV 463
Query: 143 EHDNFVFSKVLKACCELRDIDEG 165
+ D F +L+AC ++EG
Sbjct: 464 KPDEITFVGLLQACSHSGFVNEG 486
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 185/532 (34%), Positives = 280/532 (52%), Gaps = 23/532 (4%)
Query: 165 GMKVHCEIVKV--GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G VH IVK P F+ L++MY+K S+R V T +NVVSWTS+++G
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLA 84
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
QN L F MR V N T + A A LR GK +H +K G ++
Sbjct: 85 QNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ + DMY K DAR +FDE+ +L +W A I G P +A++ F + +
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIG 204
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
PN +T L+A + L++G +H L R G + D +V N L+D Y KC I +
Sbjct: 205 GQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSE 264
Query: 402 YIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV-----------------SVISACASLG 444
IF K+ ++W S+++ N + +++ SV+SACA +
Sbjct: 265 IIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMA 324
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+++G S+HA++ K + N++VG+AL++ Y KCG + + FD M EKN VT +++I
Sbjct: 325 GLELGRSIHAHAVK-ACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLI 383
Query: 505 GGYGMQGDGGGSLALFSDMLNEEV--QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
GGY QG +LALF DM PN + F ++LSACS G V G K F SM +
Sbjct: 384 GGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTY 443
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P +HY C+VD+L RAG +E+A EF++ MPI+P +S++GA + C ++ + LG +
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILA 503
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+ + +L P + +VL+SN +A+ GRW N VRE MK G+ K G S +
Sbjct: 504 AENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWI 555
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 208/449 (46%), Gaps = 24/449 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD-IVEFYKCMRKRLKEH 144
L++MY H + AR V P + S+ ++ N + + EF++ MR+
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFFE-MRREGVAP 106
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVF 203
++F F V KA LR G ++H VK G D FV DMY K R +R++F
Sbjct: 107 NDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 166
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
DE ++N+ +W + I+ V + +E + F R + N IT + AC+ L
Sbjct: 167 DEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLD 226
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G +HG + + G + + + L+D Y KC IR + +F E+ + VSW +++ Y
Sbjct: 227 LGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYV 286
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q+ +KA L+ + + I+SVLSA A + L +GR +H+ ++ +E +
Sbjct: 287 QNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIF 346
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------LDD----- 424
V +ALVDMY KC I D+ F+ EK+++ NS+I G +D
Sbjct: 347 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRG 406
Query: 425 -NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+P+ +T VS++SAC+ GAV+ G + + + +++ + G +
Sbjct: 407 CGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVE 466
Query: 484 SARMVFDAMREKNTVT-WSAMIGGYGMQG 511
A M K T++ W A+ M G
Sbjct: 467 QAFEFIKKMPIKPTISVWGALQNACRMHG 495
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 136/320 (42%), Gaps = 13/320 (4%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L+ G D L+ YG ++ + +F M + S+ ++ Y N
Sbjct: 232 HGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHED 291
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
+ Y RK + E +F+ S VL AC + ++ G +H VK + FV + L
Sbjct: 292 EKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSAL 351
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFVEG 244
VDMY KC I S Q FDE +KN+V+ S+I GY L LF M R
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAP 411
Query: 245 NQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N +T SL++AC++ A+ G K GIE + + ++DM + G + A
Sbjct: 412 NYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEF 471
Query: 304 FDELCSIDLVS-WTAMIVGYTQSGYPDKALKLFTDKKWADFFP----NHVTIASVLSASA 358
++ +S W A+ G P L + + P NHV +++ +A+
Sbjct: 472 IKKMPIKPTISVWGALQNACRMHGKPH--LGILAAENLFKLDPKDSGNHVLLSNTFAAAG 529
Query: 359 QLGNLNMGR-MVHSLGIRLG 377
+ N R + +GI+ G
Sbjct: 530 RWAEANTVREEMKGVGIKKG 549
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 296/544 (54%), Gaps = 27/544 (4%)
Query: 168 VHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
+H I+K G SF L+D Y KC I +R++FDE ++++V+W SMI+ +V
Sbjct: 23 LHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKT 82
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TA 286
+E + L++ M V + T ++ A +++ +G+ HG + +G E++ V T
Sbjct: 83 KEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATG 142
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
++DMY K G ++DAR VFD + D+V +TA+IVGY Q G +AL++F D + PN
Sbjct: 143 IVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPN 202
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFE 405
T+ASVL + LG+L G+++H L ++ GLE +L+ MY+KC+++ D+ +F
Sbjct: 203 EYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFN 262
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
+ + + W S I GL N +SP+ T S++ AC+SL ++
Sbjct: 263 SLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEA 322
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +HA + K G+ N YV AL++ Y KCG+ + AR VF+++ E + V+ + MI Y
Sbjct: 323 GEQIHAVTVKLGV-DGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYA 381
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G G +L LF M +PN V F +IL AC++ G+V EG + F + + +
Sbjct: 382 QNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTR 441
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
HY CM+DLL RA R EEA +E PDV + L+ C ++ ++ E +KKML+
Sbjct: 442 DHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLD 500
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDF 682
P ++L++N+YAS G+W V +++ + L K+P S VD+D +A D
Sbjct: 501 QAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDL 560
Query: 683 SFSR 686
S R
Sbjct: 561 SHPR 564
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 143/487 (29%), Positives = 235/487 (48%), Gaps = 20/487 (4%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
KS +LK+ H ++ G KL+ Y + AR +FD MPN ++ MI
Sbjct: 15 KSLTTLKSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMIS 74
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP- 178
+ K+ +E Y M D + FS + KA E+ EG K H V +G
Sbjct: 75 SHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEV 134
Query: 179 -DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FV TG+VDMYAK + +R VFD LDK+VV +T++I GY Q E L +F M
Sbjct: 135 SDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDM 194
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
++ N+ TL S++ +C L L GK +HG ++K G+E T+LL MY KC +
Sbjct: 195 VGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMV 254
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
D+ VF+ L V+WT+ IVG Q+G + AL +F + PNH T +S+L A
Sbjct: 255 EDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHAC 314
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ L L G +H++ ++LG++ ++ AL+ +Y KC + AR +FE+ +E DV++ N
Sbjct: 315 SSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSIN 374
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I N P+ VT +S++ AC + G V+ G + +
Sbjct: 375 TMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNN 434
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
+ T +++ + + A M+ + + + + W ++ + G+ +
Sbjct: 435 HSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKF 494
Query: 520 FSDMLNE 526
ML++
Sbjct: 495 MKKMLDQ 501
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/518 (33%), Positives = 291/518 (56%), Gaps = 20/518 (3%)
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
GP S + T L+ Y IG +R +FDE +++VV+WT MIAGY + ++F
Sbjct: 41 GP-SVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCE 99
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG- 295
M ++ N T+ S++ AC ++ L G+ +HG +K G++ ++ AL+DMY C
Sbjct: 100 MMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCV 159
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
++ DA VF + + VSWT +I GYT L++F + N + + +
Sbjct: 160 SMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVR 219
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A +G+ G +H+ + G E + V+N+++DMY +C ++A F +++D+I
Sbjct: 220 ACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLIT 279
Query: 415 WNSIISGLD----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
WN++I+G + + SP+ T S+++ACA+L + G +H +
Sbjct: 280 WNTLIAGYERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIR 339
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
+GL N+ + AL++ Y+KCG+ + VF M ++ V+W+AM+ GYG G G ++
Sbjct: 340 RGL-DGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVE 398
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF M+ ++P+ V+F ILSACSH G+V EG + F M D+ P + Y C+VDLL
Sbjct: 399 LFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLL 458
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
RAG++EEA E +E+MP +PD ++G FL C ++ +LG++ ++L+L P A YV
Sbjct: 459 GRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYV 518
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++SN+YA+DG+W ++R+LMK+ G K G S V++
Sbjct: 519 MLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVEV 556
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 219/445 (49%), Gaps = 26/445 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLK 142
T L+ Y G + AR++FD MP D ++ VMI Y N+ + F + M + L
Sbjct: 47 TTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEEL- 105
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL--TGLVDMYAK-CRDIGSS 199
+ + F S VLKAC ++ + G VH +K G D F+ L+DMYA C + +
Sbjct: 106 DPNAFTISSVLKACKGMKCLSYGRLVHGLAIK-HGLDGFIYVDNALMDMYATCCVSMDDA 164
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
VF KN VSWT++IAGY D GL +F +M VE N + V AC +
Sbjct: 165 CMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSI 224
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ G+ LH + K G E N ++ ++LDMY +C +A F E+ DL++W +I
Sbjct: 225 GSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLI 284
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY +S P ++L +F+ + F PN T S+++A A L LN G+ +H IR GL+
Sbjct: 285 AGYERSN-PTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLD 343
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------- 421
+ + NAL+DMY+KC IAD+ +F S +D+++W +++ G
Sbjct: 344 GNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKM 403
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+ + PD V ++++SAC+ G V G +S + + +++ + G
Sbjct: 404 VRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGK 463
Query: 482 AQSARMVFDAMREK-NTVTWSAMIG 505
+ A + ++M K + W +G
Sbjct: 464 VEEAYELIESMPFKPDECVWGPFLG 488
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 66 KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H +I GL N + L+ MY G++ + VF M D S+ M+ Y +
Sbjct: 331 QQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTH 390
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
++ VE + M + D VF +L AC +DEG++
Sbjct: 391 GYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLR 433
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 323/622 (51%), Gaps = 31/622 (4%)
Query: 83 NTKLVSMYGSFGHVK-----YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
NT V+M S G+VK AR +F+SM + + S+ +MI Y N+ K+ Y M
Sbjct: 76 NTSSVNMMVS-GYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEM 134
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAK--CR 194
+ + D+ F+ +L + + E +++H I++ G S V LVD Y K C
Sbjct: 135 CRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCL 194
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
DI S Q+F E K+ VS+ MI GY + +E L LF +MR + + T +++
Sbjct: 195 DIAS--QLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLG 252
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
+ G+ +HG +K + + ALLD Y K I A+++FDE+ +D VS
Sbjct: 253 MSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVS 312
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+ +I GY +G +K+ LF + F + A++LS +A NL+MGR H+ +
Sbjct: 313 YNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAV 372
Query: 375 -RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDD---- 424
+ + V NALVDMYAKC DA IF + ++ + W +IIS G +
Sbjct: 373 VTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALK 432
Query: 425 --------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
NV D T S + A A+L +V +G LH+ + GLLSS V+ G+ L++ Y
Sbjct: 433 MFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSS-VFSGSVLVDMY 491
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
A CG + A VF M ++N V W+A+I Y GD + + F+DM+ + P+ V F
Sbjct: 492 ANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFL 551
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
++L+ACSH G+V + F SM + +K P KHY M+D+L R+GR EA + MP
Sbjct: 552 SVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPF 611
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQ 655
EPD ++ + L+ C ++ DL + ++ ++ + A YV +SN+YA G+W +
Sbjct: 612 EPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAK 671
Query: 656 VRELMKQRGLSKSPGCSLVDLD 677
V++ M++RG+ K S V++D
Sbjct: 672 VKKAMRERGVKKVTAYSWVEID 693
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 234/501 (46%), Gaps = 60/501 (11%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPD----SFVLTGLVDMYAKCRDIGSSRQV 202
+FSK R +D + V IVK G P+ +F L LV + I +RQ+
Sbjct: 15 IFSKRFYCGFSERIVD--IPVDARIVKTGFDPEISRFNFKLKDLV----RANQIAKARQL 68
Query: 203 FDE-------------------------------TLDKNVVSWTSMIAGYVQNDCAQEGL 231
FDE +N VSWT MI GY QN+ +E
Sbjct: 69 FDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAF 128
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
L+ M V+ + IT +L++ L + +H +I++ G + + +L+D Y
Sbjct: 129 NLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSY 188
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
K + A +F E+ + D VS+ MI GYT+ G+ ++ALKLF + DF P+ T A
Sbjct: 189 CKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFA 248
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEK 410
++L S ++ G+ +H L I+ + D V NAL+D Y+K I A+ +F+ E
Sbjct: 249 AMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPEL 308
Query: 411 DVIAWNSIISGLDDNVSPD-AVTLVSVISACA------------SLGAVQVGSSLHAYST 457
D +++N II+G N + + L + + S+ A+++ S+ +
Sbjct: 309 DGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTH 368
Query: 458 KQGLLS---SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
Q +++ S V VG AL++ YAKC + A +F + +N+V W+A+I Y +G
Sbjct: 369 AQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHE 428
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
+L +F +M E V ++ F + L A ++ V G + S+ R + S+ +
Sbjct: 429 EALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIR-LGLLSSVFSGSVL 487
Query: 575 VDLLARAGRLEEALEFMENMP 595
VD+ A G +++A+E + MP
Sbjct: 488 VDMYANCGSMKDAIEVFKEMP 508
>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like, partial [Vitis vinifera]
Length = 825
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/612 (30%), Positives = 322/612 (52%), Gaps = 23/612 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S Y G++ AR +FD M ++ ++I Y + +K+ E + M++ E D
Sbjct: 89 MISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPD 148
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVF 203
F +L C ++ +V +I+K+G DS ++ G LVD Y K + + Q+F
Sbjct: 149 YVTFVTLLSGCNGHEMGNQITQVQTQIIKLG-YDSRLIVGNTLVDSYCKSNRLDLACQLF 207
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
E + + VS+ +MI GY ++ ++ + LF M+ ++ + T +++ A L +
Sbjct: 208 KEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIV 267
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H +++K N + ALLD Y K ++ DAR +FDE+ D VS+ +I GY
Sbjct: 268 LGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYA 327
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
G A LF + ++ F A++LS ++ + MGR +H+ I + +
Sbjct: 328 WDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEIL 387
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
+ N+LVDMYAKC +A IF + + + W ++IS +
Sbjct: 388 VGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQAS 447
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V D T S++ A AS+ ++ +G LH++ K G +S NV+ G+ALL+ YAKCG + A
Sbjct: 448 VIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMS-NVFSGSALLDVYAKCGSIKDA 506
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
F M ++N V+W+AMI Y G+ +L F +M+ +QP+ V F +LSACSH+
Sbjct: 507 VQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHS 566
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG F SM + +K P +HY +VD+L R+GR EA + M MPI+PD ++ +
Sbjct: 567 GLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSS 626
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
L+ C ++ +L ++ + + A YV +SN+YA+ G+W V++V + M+ RG
Sbjct: 627 VLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRG 686
Query: 665 LSKSPGCSLVDL 676
+ K P S V++
Sbjct: 687 VKKLPAYSWVEI 698
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 142/533 (26%), Positives = 244/533 (45%), Gaps = 69/533 (12%)
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+ IVK G PD+ V + K ++ +RQ+F++ KN VS MI+GYV++
Sbjct: 39 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98
Query: 227 AQEGLVLF---------------------NRMREGF----------VEGNQITLGSLVTA 255
E LF N+ +E F E + +T +L++
Sbjct: 99 LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C +Q + I+K+G + + L+D Y K + A +F E+ ID VS+
Sbjct: 159 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSY 218
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
AMI GY++ G +KA+ LF + + + P T A+VL A+ L ++ +G+ +HS I+
Sbjct: 219 NAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIK 278
Query: 376 LG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
+ + V NAL+D Y+K + DAR +F+ E+D +++N IISG
Sbjct: 279 TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDL 338
Query: 422 --------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
D P A T++S+ S ++G +HA T S + VG +L+
Sbjct: 339 FRELQFTAFDRKQFPFA-TMLSIASNTLDW---EMGRQIHA-QTIVTTADSEILVGNSLV 393
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ YAKCG + A M+F + ++ V W+AMI Y +G L LF+ M V ++
Sbjct: 394 DMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQA 453
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F ++L A + + G K +S F+ ++ ++D+ A+ G +++A++ +
Sbjct: 454 TFASLLRASASIASLSLG-KQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQE 512
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE-----LHPDKACYYVLVS 641
MP VS + A + Y++ E +K E L PD + ++S
Sbjct: 513 MPDRNIVS-WNAMISA---YAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLS 561
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+LL S SL K H+ +I G ++N + L+ +Y G +K A F MP+
Sbjct: 457 SLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR 516
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM--- 166
+ S+ MI Y N + ++ +K M + D+ F VL AC ++EG+
Sbjct: 517 NIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHF 576
Query: 167 KVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMI 218
+I K+ P +VDM + + ++ E +D + + W+S++
Sbjct: 577 NSMTQIYKL-DPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVL 628
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/543 (30%), Positives = 295/543 (54%), Gaps = 19/543 (3%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
++K ++ + ++H + ++ + ++ +Y + + + VF V
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPV 70
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
++W S+I + L F MR + S++ +C + L G+ +HG+
Sbjct: 71 LAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
I+++G++ + + AL++MY K I R VF+ + D+VS+ +I GY QSG + A
Sbjct: 131 IVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDA 190
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDM 390
L++ + +D P+ T++SVL ++ ++ G+ +H IR G++ D + ++LVDM
Sbjct: 191 LRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDM 250
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTL 433
YAK I D+ +F +D I+WNS+++G N V P AV
Sbjct: 251 YAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAF 310
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
SVI ACA L + +G LH Y + G N+++ +AL++ Y+KCG+ Q+AR +FD M
Sbjct: 311 SSVIPACAHLATLHLGKQLHGYVLRGGF-GRNIFIASALVDMYSKCGNIQAARKIFDRMN 369
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+ V+W+A+I G+ + G G +++LF +M + V+PN+V F +L+ACSH G+V E W
Sbjct: 370 LHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 429
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F SM + + ++HY + DLL RAG+LEEA +F+ M +EP S++ L C ++
Sbjct: 430 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVH 489
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
+L E + +K+ + + YVL+ N+YAS+GRW + ++R ++++GL K P CS
Sbjct: 490 KNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSW 549
Query: 674 VDL 676
+++
Sbjct: 550 IEM 552
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 232/465 (49%), Gaps = 20/465 (4%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
KS K HA I + + ++S+Y + + A VF ++ +P +++ +IR
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIR 78
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP- 178
+ L+ + + MR + D+ VF VLK+C + D+ G VH IV++G
Sbjct: 79 CFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D + L++MY+K I S R+VF+ K+VVS+ ++IAGY Q+ ++ L + M
Sbjct: 139 DLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMG 198
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
++ + TL S++ ++ + +GK +HGY+++ GI+ + ++ ++L+DMY K I
Sbjct: 199 TSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 258
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
D+ VF L D +SW +++ GY Q+G ++AL+LF A P V +SV+ A A
Sbjct: 259 DSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACA 318
Query: 359 QLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
L L++G+ +H +R G + + +ALVDMY+KC I AR IF+ + D ++W +
Sbjct: 319 HLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTA 378
Query: 418 IISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
II G V P+ V V+V++AC+ +G V TK
Sbjct: 379 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 438
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMI 504
L+ + A+ + + G + A MR E WS ++
Sbjct: 439 GLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLL 483
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 184/362 (50%), Gaps = 9/362 (2%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
++ H ++ G+ D L++MY + R VF+ MP D S+ +I Y +
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQS 184
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+Y+D + + M + D F S VL E D+ +G ++H +++ G D ++
Sbjct: 185 GMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIG 244
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ LVDMYAK I S +VF ++ +SW S++AGYVQN E L LF +M V
Sbjct: 245 SSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVR 304
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ S++ ACA L LH GK LHGY+L+ G N + +AL+DMY KCGNI+ AR +
Sbjct: 305 PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKI 364
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
FD + D VSWTA+I+G+ G+ +A+ LF + K PN V +VL+A + +G +
Sbjct: 365 FDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLV 424
Query: 364 N-----MGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+ M G+ LE Y + L+ K D +I + E W+++
Sbjct: 425 DEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYD--FISKMRVEPTGSVWSTL 482
Query: 419 IS 420
+S
Sbjct: 483 LS 484
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 121/257 (47%), Gaps = 23/257 (8%)
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSE 409
I +++ ++ + + + +H+ IR +T + ++ +Y ++ +A +F+T
Sbjct: 8 IKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLES 67
Query: 410 KDVIAWNSIISGLDDNV-----------------SPDAVTLVSVISACASLGAVQVGSSL 452
V+AW S+I D PD SV+ +C + ++ G S+
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H + + G + ++Y G AL+N Y+K S R VF+ M K+ V+++ +I GY G
Sbjct: 128 HGFIVRLG-MDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGM 186
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
+L + +M +++P+ +++L S V +G + + R K + S Y+
Sbjct: 187 YEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIR--KGIDS-DVYI 243
Query: 573 --CMVDLLARAGRLEEA 587
+VD+ A++ R+E++
Sbjct: 244 GSSLVDMYAKSARIEDS 260
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/605 (32%), Positives = 309/605 (51%), Gaps = 23/605 (3%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + A +FD MP+ D ++ MI Y + EF K M++R + D + F +L
Sbjct: 50 GDLNLACKLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSIL 109
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
K D G +VH IVK+G S + + L+DMYAKC + + VF +N V
Sbjct: 110 KGVAHACRHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFV 169
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
SW ++I G+VQ L + M++ V T L+T + LH I
Sbjct: 170 SWNALIDGFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKI 229
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFD-ELCSIDLVSWTAMIVGYTQSGYPDKA 331
+K G+E + L A L Y +CG + DA+ VFD + + DLV+W +M+V Y + A
Sbjct: 230 IKHGLEFYNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDA 289
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDM 390
LF + + F P+ T V+SA + N G+ H+L I+ GLE+ T+ NAL+ M
Sbjct: 290 FNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITM 349
Query: 391 YAKCH--VIADARYIFETTSEKDVIAWNSIISGLDD-NVSPDAVTLV------------- 434
Y K + + A +F + KD ++WNSI++G S DA+ L
Sbjct: 350 YLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDY 409
Query: 435 ---SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
+V+ +C+ L +Q+G +H + K G SN +V ++L+ Y+KCG + A F+
Sbjct: 410 AYSAVLRSCSDLAILQLGQQIHLLTVKTGF-DSNDFVASSLIFMYSKCGIIEDAWKCFED 468
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+++++TW++++ Y G G +L LFS M EV+ + V F +L+ACSH G+V +G
Sbjct: 469 TTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQG 528
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCG 611
SM D+ P M+HY C VDL RAG LEEA +++MP +P+ + L C
Sbjct: 529 RCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACR 588
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 671
+L + ++LE+ P++ C YV++SN+Y RW V LM++R + K PG
Sbjct: 589 ACGNIELAAQVASQLLEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGW 648
Query: 672 SLVDL 676
S +++
Sbjct: 649 SWIEV 653
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 241/501 (48%), Gaps = 36/501 (7%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H+L++ G + L+ MY V+ A VF MP +F S+ +I +
Sbjct: 125 HSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDR 184
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE----GMKVHCEIVKVGGPDSFVL 183
CM+K ++ F+ +L L D D+ M++HC+I+K G L
Sbjct: 185 DTAFWLLDCMQKEGVRVEDGTFAPLLT----LLDGDKFYKLTMQLHCKIIKHGLEFYNAL 240
Query: 184 -TGLVDMYAKCRDIGSSRQVFDETL-DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
+ Y++C + +++VFD + +++V+W SM+ Y+ +D ++ LF M+
Sbjct: 241 CNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFG 300
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN--IRD 299
E + T +++AC + GK H ++K G+E + + AL+ MY+K N +
Sbjct: 301 FEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEA 360
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A ++F + S D VSW +++ G++Q G+ + ALKLF + + + ++VL + +
Sbjct: 361 ALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSD 420
Query: 360 LGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L L +G+ +H L ++ G + V ++L+ MY+KC +I DA FE T+++ I WNSI
Sbjct: 421 LAILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSI 480
Query: 419 ISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSS-LHAYSTKQG 460
+ + V D VT V+V++AC+ +G V+ G L + + G
Sbjct: 481 MFAYAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYG 540
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLAL 519
+ + A ++ + + G + A+ + D+M + N + ++G G+ + +
Sbjct: 541 IPPRMEHYACA-VDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQV 599
Query: 520 FSDMLNEEVQPNEVIFTTILS 540
S +L EV+P E ILS
Sbjct: 600 ASQLL--EVEPEEHCTYVILS 618
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/603 (31%), Positives = 320/603 (53%), Gaps = 36/603 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
NT L+ Y G +AR +F+ +P+ D S+ V+I Y + D ++ + M +
Sbjct: 81 NTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLRESF 140
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ + +L +C +G VH +K G G D + L MYAKC D+ +S+
Sbjct: 141 RPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQL 200
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLR 260
+F E +KNV+SW +MI Y QN + ++ F M +EG+ + + +T+ +L++A A
Sbjct: 201 LFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGW-QPSPVTMMNLMSANAVPE 259
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+H YI+K G ++ +VT+L+ +Y K G A+ +++ + DL+S T +I
Sbjct: 260 TVH------CYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIIS 313
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-E 379
Y++ G + A++ F D P+ V + SVL + + +G H G++ GL
Sbjct: 314 SYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTN 373
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD--------------- 424
D V N L+ Y++ I A +F SEK +I WNS+ISG
Sbjct: 374 DCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMN 433
Query: 425 --NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV----YVGTALLNFYAK 478
PDA+T+ S++S C LG +++G +LH Y +L +NV + GTAL++ Y K
Sbjct: 434 MCGQKPDAITIASLLSGCCQLGYLRIGETLHGY-----ILRNNVKVEDFTGTALIDMYTK 488
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG A +F ++ + VTW+++I GY + G + FS + + ++P+++ F +
Sbjct: 489 CGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDKITFLGV 548
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L+AC+H G+V G + F M +++ +P+++HY C+V LL RAG +EA+E + NM I P
Sbjct: 549 LAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEIINNMEIRP 608
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
D +++GA L C + LGE + K + L+ +YV +SNLYA GRW V +VR+
Sbjct: 609 DSAVWGALLSACWIQQEVKLGECLAKNLFLLNYKNGGFYVSLSNLYAIVGRWDDVARVRD 668
Query: 659 LMK 661
+M+
Sbjct: 669 MMR 671
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 151/579 (26%), Positives = 267/579 (46%), Gaps = 46/579 (7%)
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDN---FVFSKVLKACCELRDIDEGM---------KVH 169
++ L+ D R+ L+ N FS ++KAC ++
Sbjct: 7 LIHSLFHDASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQ 66
Query: 170 CEIVKVGGPDSF--VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
+++K G D F V T L+D Y K +RQ+F++ +VVSW +I GY Q+
Sbjct: 67 TQLLK-RGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHP 125
Query: 228 QEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ L LF M RE F NQ T+ SL+ +C + QG+ +H + +K G+ ++ L A
Sbjct: 126 HDALQLFVHMLRESF-RPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNA 184
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L MY KC ++ ++ +F E+ +++SW MI Y Q+G+ DKA+ F + + P+
Sbjct: 185 LTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPS 244
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
VT+ +++SA+A + VH I+ G D +V+ +LV +YAK A+ ++E
Sbjct: 245 PVTMMNLMSANA------VPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYE 298
Query: 406 TTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQV 448
KD+I+ IIS + ++ PDAV L+SV+ + +
Sbjct: 299 CYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAI 358
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G + H Y K G L+++ V L++FY++ + +A +F EK +TW++MI G
Sbjct: 359 GCAFHGYGLKNG-LTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCV 417
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G ++ LF M +P+ + ++LS C G + G + R+ V
Sbjct: 418 QAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDF 477
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
++D+ + GRL+ A + ++ +P + + + + G LY K+ E
Sbjct: 478 TG-TALIDMYTKCGRLDYAEKIFYSIN-DPCLVTWNSIISGYSLYGLEHKAFGCFSKLQE 535
Query: 629 --LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L PDK + +++ + + R + K+ GL
Sbjct: 536 QGLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGL 574
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 13/214 (6%)
Query: 67 AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
AFH + +GLTND L+S Y F + A S+F ++ MI
Sbjct: 361 AFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAG 420
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
D +E + M ++ D + +L CC+L + G +H I++ + F T
Sbjct: 421 KSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRNNVKVEDFTGT 480
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+DMY KC + + ++F D +V+W S+I+GY + F++++E +E
Sbjct: 481 ALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEP 540
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
++IT ++ AC HG ++ G+E
Sbjct: 541 DKITFLGVLAACT-----------HGGLVYAGME 563
>gi|302788478|ref|XP_002976008.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
gi|300156284|gb|EFJ22913.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
Length = 495
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 268/487 (55%), Gaps = 19/487 (3%)
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
FV L++MY KC + +R+ F+ +NV+SW++M+A Y Q + LVLF +M E
Sbjct: 10 EFVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEE 69
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
VE N++T S++ ACA A+ QG+ +H + + +++ + TAL+ MY KC + +
Sbjct: 70 EGVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIE 129
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
AR VFD + D+V+W+ MI Y Q G+ +A++LF PN + + S+L A +
Sbjct: 130 ARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSS 189
Query: 360 LGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
G L G+M H L + G D + N L+ MY KC +A A+ +F +D+I+W+++
Sbjct: 190 AGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAM 249
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
++ + ++ V PD VT VS++ AC+ LGA+ G +H +G
Sbjct: 250 LAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGF 309
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
S +Y+ +L++ Y KCG Q+AR +FD M +N +TW+ MI G +L LF
Sbjct: 310 -QSVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFE 368
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+M VQP++V F +I+ +CSH+G+V EG F M D F P ++H+V M+DLL R+
Sbjct: 369 EMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRS 428
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G+L EA E ME MP+EP V + L C ++ + + ML L P A YV S
Sbjct: 429 GKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYVSFS 488
Query: 642 NLYASDG 648
N+ + G
Sbjct: 489 NILSGKG 495
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 209/442 (47%), Gaps = 20/442 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
L++MYG G V+ AR F+SM + + S+ M+ Y + + ++ M +
Sbjct: 13 GNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGV 72
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQ 201
E + F VL AC +++G +H + + ++ T LV MY KC + +RQ
Sbjct: 73 EPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEARQ 132
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFD ++K+VV+W++MI+ Y Q +E + LF M V N+I L S++ AC+ A
Sbjct: 133 VFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAGA 192
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +GK H ++ G + L+ MY KCG++ A++VF + DL+SW+AM+
Sbjct: 193 LAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAV 252
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
+ G+ A F P++VT S+L A + LG L G ++H+ G +
Sbjct: 253 IAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQSV 312
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------D 423
I N+L+DMY KC + AR IF+ S ++VI W ++I+
Sbjct: 313 MYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEK 372
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V PD V +S+I +C+ G V+ G + + V +L+ + G
Sbjct: 373 AGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLN 432
Query: 484 SARMVFDAMR-EKNTVTWSAMI 504
A + + M E V W+ ++
Sbjct: 433 EAEELMEFMPVEPGVVGWNTLL 454
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 172/346 (49%), Gaps = 12/346 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T LV MYG + AR VFD + D ++ MI Y ++ ++ + M
Sbjct: 114 GTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGV 173
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSR 200
+ + +L AC + EG H E+V + G + V TG L+ MY KC D+ S++
Sbjct: 174 RPNEIILMSILGACSSAGALAEGKMTH-ELVVICGFGADVSTGNTLIKMYGKCGDLASAK 232
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
VF ++++SW++M+A ++ ++ V F RM V+ + +T SL+ AC+ L
Sbjct: 233 AVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLG 292
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
AL +G +H I G + ++ +L+DMY KCG+++ AR +FD + ++++WT MI
Sbjct: 293 ALVEGHVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMIT 352
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIR 375
Q +AL+LF + + A P+ V S++ + + G + GR MV
Sbjct: 353 ACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFT 412
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFE-TTSEKDVIAWNSIIS 420
G+E + ++D+ + + +A + E E V+ WN+++S
Sbjct: 413 PGVEHFV---GMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLS 455
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/573 (30%), Positives = 299/573 (52%), Gaps = 49/573 (8%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-N 210
+L+ ++ + ++H +I++ P +L+ ++ +Y+ + S +F+
Sbjct: 11 LLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPT 70
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
++W S+I Y + L F +M + S++ +C ++ L G+ +HG
Sbjct: 71 TLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHG 130
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDA-----------------------------R 301
I+++G+ + + AL++MY K ++ + R
Sbjct: 131 CIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLR 190
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF+ + D+VSW +I G Q+G + AL + + AD P+ T++SVL A+
Sbjct: 191 KVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYV 250
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
NL G+ +H IR G + D + ++L+DMYAKC + D+ +F + D I+WNSII+
Sbjct: 251 NLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIA 310
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G N + P+ V+ S++ ACA L + +G LH Y +
Sbjct: 311 GCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF-D 369
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
NV++ +AL++ YAKCG+ ++AR +FD M + V+W+AMI GY + G +++LF M
Sbjct: 370 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 429
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
E V+PN V F +L+ACSH G+V E WK F SM +D++ +P ++HY + DLL R GR
Sbjct: 430 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGR 489
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
LEEA EF+ +M IEP S++ L C ++ +L E + KK+ + P YVL+SN+
Sbjct: 490 LEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNI 549
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y++ GRW ++R M+ +G+ K P CS +++
Sbjct: 550 YSAAGRWKDARKLRIAMRDKGMKKKPACSWIEI 582
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/497 (26%), Positives = 237/497 (47%), Gaps = 50/497 (10%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF-YSFQVMI 118
KS K HA ++ L + + ++S+Y + + + +F+S+P+P +++ +I
Sbjct: 19 KSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSII 78
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
R Y + L+ + F+ M K D+ VF VLK+C ++D+ G VH I+++G G
Sbjct: 79 RCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMG 138
Query: 178 PDSFVLTGLVDMYA------------------KCRDI-----------GSSRQVFDETLD 208
D + L++MY+ K D+ GS R+VF+
Sbjct: 139 FDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPK 198
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+++VSW ++I+G QN ++ L++ M + + TL S++ A+ L +GK +
Sbjct: 199 RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEI 258
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
HGY ++ G + + + ++L+DMY KC + D+ VF L D +SW ++I G Q+G
Sbjct: 259 HGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMF 318
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NAL 387
D+ LK F A PNHV+ +S++ A A L L++G+ +H IR + I +AL
Sbjct: 319 DEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASAL 378
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDA 430
VDMYAKC I AR+IF+ D+++W ++I G + V P+
Sbjct: 379 VDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNY 438
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVF 489
V ++V++AC+ G V T+ + + A+ + + G + A +
Sbjct: 439 VAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFIS 498
Query: 490 DAMREKNTVTWSAMIGG 506
D E WS ++
Sbjct: 499 DMHIEPTGSVWSTLLAA 515
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/404 (30%), Positives = 200/404 (49%), Gaps = 32/404 (7%)
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
R VF+ MP D S+ +I N +++D + + M D+F S VL E
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249
Query: 160 RDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
++ +G ++H ++ G D F+ + L+DMYAKC + S +VF + +SW S+I
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 309
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
AG VQN EGL F +M ++ N ++ S++ ACA L LH GK LHGYI++ +
Sbjct: 310 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 369
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
N + +AL+DMY KCGNIR AR +FD++ D+VSWTAMI+GY G+ A+ LF
Sbjct: 370 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 429
Query: 339 KWADFFPNHVTIASVLSASAQLGNLN-----MGRMVHSLGIRLGLEDYTVINALVDMYAK 393
+ PN+V +VL+A + G ++ M I GLE Y A+ D+ +
Sbjct: 430 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYA---AVADLLGR 486
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
+ +A +E S D ++ P ++++AC +++ +
Sbjct: 487 VGRLEEA---YEFIS--------------DMHIEPTGSVWSTLLAACRVHKNIELAEKV- 528
Query: 454 AYSTKQGLLSSNVYVGTALL--NFYAKCGDAQSARMVFDAMREK 495
+K+ +G +L N Y+ G + AR + AMR+K
Sbjct: 529 ---SKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDK 569
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/327 (18%), Positives = 138/327 (42%), Gaps = 58/327 (17%)
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFET-TSEK 410
++L + + + + + +H+ +R L ++++ ++ +Y+ +++ D+ IF + S
Sbjct: 10 TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPP 69
Query: 411 DVIAWNSII-----------------SGLDDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
+AW SII L PD SV+ +C + ++ G S+H
Sbjct: 70 TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQ-----------------------------S 484
+ G+ ++Y AL+N Y+K + S
Sbjct: 130 GCIIRLGM-GFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGS 188
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
R VF+ M +++ V+W+ +I G G +L + +M N +++P+ +++L +
Sbjct: 189 LRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAE 248
Query: 545 TGMVGEGWKCF-YSMCRDFK---FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
+ +G + Y++ + F+ S ++D+ A+ R++++ +P +
Sbjct: 249 YVNLLKGKEIHGYAIRNGYDADVFIGS-----SLIDMYAKCTRVDDSCRVFYMLPQHDGI 303
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKML 627
S + + + GC FD G ++ML
Sbjct: 304 S-WNSIIAGCVQNGMFDEGLKFFQQML 329
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 200/653 (30%), Positives = 313/653 (47%), Gaps = 67/653 (10%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + +L + H L + GL + L+ MY G V A +FD MP+P
Sbjct: 147 SVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSP 206
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL--------RD 161
+ SF M+ D + + M + D S VL AC + R
Sbjct: 207 NEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARA 266
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
I +H +V+ G G D V LVD+YAK + + +VF+ ++VSW +I G
Sbjct: 267 IQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITG 326
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
Y Q C + + + M+E E N++T +++ +C K R
Sbjct: 327 YGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKAR-------------------- 366
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
++ AR++FD++ + +W ++ GY Q + + LF +
Sbjct: 367 ---------------DVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQH 411
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
+ P+ T+A +LS+ ++LGN +G+ VHS +RL L D V + L+D+Y+KC +
Sbjct: 412 QNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGI 471
Query: 400 ARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACAS 442
A IF +E+DV+ WNS+ISGL ++ + P + S+I+ CA
Sbjct: 472 ALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCAR 531
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L ++ G +HA K G NVYVG +L++ YAK G+ AR+ F+ M KN V W+
Sbjct: 532 LSSIPQGRQMHAQVLKDGY-DQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNE 590
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI GY G G ++ LF ML + +P+ V F +L+ CSH+G+V E F SM ++
Sbjct: 591 MIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNY 650
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P ++HY C++D LARA R E + MP + D L+ L C ++ +LGE
Sbjct: 651 GITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFS 710
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
K + L P YVL+SN+YA+ GR + VR LM RG+ K G S V+
Sbjct: 711 AKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVN 763
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 149/626 (23%), Positives = 281/626 (44%), Gaps = 98/626 (15%)
Query: 57 GLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
G S + KA HA ++ GL D +LV +Y G +A F ++P+P+ YS+
Sbjct: 21 GRKPSRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYN 80
Query: 116 VMIR-------------------------WYFL------NDLYKDIVEFYKCMRKRLKEH 144
I W + + + +E Y+ M +
Sbjct: 81 AAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAP 140
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
NF + VL AC + +D+G + H VKVG FV GL+ MY KC + + ++F
Sbjct: 141 TNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLF 200
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK----- 258
D N VS+T+M+ G Q + L LF RM + + + + S++ ACA+
Sbjct: 201 DGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGD 260
Query: 259 ---LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
RA+ + +H +++ G + H+ +L+D+Y K + +A VF+ L S+ +VSW
Sbjct: 261 YNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSW 320
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+I GY Q G ++A+++ + + F PN VT +++L++
Sbjct: 321 NILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASC------------------ 362
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD------------ 423
K + AR +F+ + V WN+++SG
Sbjct: 363 ----------------IKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLF 406
Query: 424 -----DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
NV PD TL ++S+C+ LG ++G +H+ S + LL ++++V + L++ Y+K
Sbjct: 407 RRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRL-LLHNDMFVASGLIDIYSK 465
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG A ++F+ M E++ V W++MI G + + M + P E + ++
Sbjct: 466 CGQVGIALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASM 525
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
++ C+ + +G + + +D + ++ ++D+ A++G +++A F M ++
Sbjct: 526 INLCARLSSIPQGRQMHAQVLKD-GYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKN 584
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIK 624
V+ + +HG Y++ GE ++
Sbjct: 585 LVA-WNEMIHG---YAQNGFGEKAVE 606
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 147/520 (28%), Positives = 252/520 (48%), Gaps = 51/520 (9%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
P+ + + + D+ ++R + D+N VSW ++IA ++ E L ++ M
Sbjct: 74 PNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGM 133
Query: 238 -REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+EG N TL S+++AC + AL G+ HG +K+G++ + + LL MY KCG+
Sbjct: 134 LQEGLAPTN-FTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGS 192
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ DA +FD + S + VS+TAM+ G Q G D AL+LF + V ++SVL A
Sbjct: 193 VADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGA 252
Query: 357 SAQ--LGNLNMGRM------VHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETT 407
AQ G+ N+ R +H+L +R G D V N+LVD+YAK + +A +FE+
Sbjct: 253 CAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESL 312
Query: 408 SEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
S +++WN +I+G LG + + + + G + V
Sbjct: 313 SSVSIVSWNILITGY------------------GQLGCYERAMEVLEFMQESGFEPNEVT 354
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
L + K D SAR +FD + + + TW+ ++ GYG + ++ LF M ++
Sbjct: 355 YSNMLASCI-KARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQN 413
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR----DFKFVPSMKHYVCMVDLLARAGR 583
VQP+ ILS+CS G G + + R + FV S ++D+ ++ G+
Sbjct: 414 VQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVAS-----GLIDIYSKCGQ 468
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ AL + NM E DV + + + G ++S + +K+M E + P ++ Y ++
Sbjct: 469 VGIAL-IIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMI- 526
Query: 642 NLYASDGRWIRVNQVRELMKQ---RGLSKS--PGCSLVDL 676
NL A R + Q R++ Q G ++ GCSL+D+
Sbjct: 527 NLCA---RLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDM 563
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 113/291 (38%), Gaps = 56/291 (19%)
Query: 436 VISAC-----------------------ASLGA--------VQV----GSSLHAYSTKQG 460
V+ AC A L A V++ G HA +
Sbjct: 11 VLQACIKRSGGRKPSRSNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRA 70
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
L NVY A ++ + GD +AR + M ++N V+W+ +I G G +L ++
Sbjct: 71 LPHPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMY 130
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR----DFKFVPSMKHYVCMVD 576
ML E + P ++LSAC + +G +C + +FV + ++
Sbjct: 131 QGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVEN-----GLLG 185
Query: 577 LLARAGRLEEALEFMENMPIEPDVS---LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
+ + G + +A+ + MP +VS + G G + L M + + + P
Sbjct: 186 MYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDP-V 244
Query: 634 ACYYVLVSNLYASDG-----RWIRVNQ-VRELMKQRGLSKSP--GCSLVDL 676
A VL + A G R I++ Q + L+ ++G G SLVDL
Sbjct: 245 AVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDL 295
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 201/651 (30%), Positives = 333/651 (51%), Gaps = 72/651 (11%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H L++ G +N + L+ MY G + A VF+ + P+ +F M+ +
Sbjct: 161 HGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQV 220
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCE------------LRDIDEGMKVHCEIVKV 175
K+ +E ++ M ++ D+ S +L C + L +G ++H VK
Sbjct: 221 KEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKH 280
Query: 176 G-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN-VVSWTSMIAGYVQNDCAQEGLVL 233
G D + L+DMYAK D+ S+ VF E LDK+ VVSW MI+GY +++ L
Sbjct: 281 GFERDLHLCNSLLDMYAKTGDMDSAENVF-ENLDKHSVVSWNIMISGYGNRCDSEKALEC 339
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
F RM+ E + +T +++TAC VK
Sbjct: 340 FQRMQCCGYEPDDVTYINMLTAC-----------------------------------VK 364
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
G+++ R +FD + S L+SW A++ GY QS +A++LF ++ P+ T+A +
Sbjct: 365 SGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAII 424
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDV 412
LS+ A+LG L G+ VH++ +LG +D V ++L+++Y+KC + ++++F SE DV
Sbjct: 425 LSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDV 484
Query: 413 IAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+ WNS+I+G N P + ++ S+CA L ++ G +HA
Sbjct: 485 VCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQ 544
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K G + NV+VG++L+ Y KCGD +AR FD M KN VTW+ MI GY G G
Sbjct: 545 IIKDGYVD-NVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLE 603
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
+++L+ DM++ +P+++ F +L+ACSH+ +V EG + F SM + F+ VP + HY C++
Sbjct: 604 AVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCII 663
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
D L R GR E ++ MP + D ++ L C +++ L + +++ L+P +
Sbjct: 664 DCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSA 723
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL--DIANDFSF 684
YVL++N+Y+S GRW VR+LM + K PG S + D+ N SF
Sbjct: 724 PYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDPGYSRSEFKYDVQNKTSF 774
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 166/630 (26%), Positives = 288/630 (45%), Gaps = 105/630 (16%)
Query: 47 LPSIPCLNLLGLC---KSTGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARS 101
+ S+ +NLL C KS S K HA + L +D CN L+ +Y + A
Sbjct: 3 VKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCN-HLIDLYSKCNQITSAHH 61
Query: 102 VFDSMPNPDFYSFQVMIRWY------------FLNDLYKDIVEFYKCM---------RKR 140
VFD +P+ + +S+ ++ + FL ++ V + R+
Sbjct: 62 VFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQA 121
Query: 141 LKEHD-----------NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVD 188
L +D + F+ V AC L+D++ G + H ++KVG + +V L+
Sbjct: 122 LDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLC 181
Query: 189 MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT 248
MY KC + +VF+ ++ N V++T+M+ G Q + +EGL LF M + + ++
Sbjct: 182 MYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVS 241
Query: 249 LGSLVTACAK------------LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
L +++ CAK L QGK +H +K G E + HL +LLDMY K G+
Sbjct: 242 LSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGD 301
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ A +VF+ L +VSW MI GY +KAL+ F + + P+ VT ++L+A
Sbjct: 302 MDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTA 361
Query: 357 SAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ G++ +GR IF+ S +I+WN
Sbjct: 362 CVKSGDVKVGRQ----------------------------------IFDCMSSPSLISWN 387
Query: 417 SIISGLDDNV-----------------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+I+SG + + +PD TL ++S+CA LG ++ G +HA S K
Sbjct: 388 AILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKL 447
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G +VYV ++L+N Y+KCG + ++ VF + E + V W++MI G+ + +LA
Sbjct: 448 GFY-DDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALAC 506
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M P+E F TI S+C+ + +G + + +D +V ++ +V++
Sbjct: 507 FKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKD-GYVDNVFVGSSLVEMYC 565
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+ G + A + + MP ++ + +HG
Sbjct: 566 KCGDVGAARYYFDMMP-GKNIVTWNEMIHG 594
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 214/444 (48%), Gaps = 30/444 (6%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
C S +L+ F + +D +++ G VK R +FD M +P S+ ++
Sbjct: 331 CDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAIL 390
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
Y + + + VE ++ M+ + + D + +L +C EL ++ G +VH K+G
Sbjct: 391 SGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFY 450
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D +V + L+++Y+KC + S+ VF + + +VV W SMIAG+ N Q+ L F RM
Sbjct: 451 DDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRM 510
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R+ ++ + ++ ++CAKL +L QG+ +H I+K G N + ++L++MY KCG++
Sbjct: 511 RQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDV 570
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
AR FD + ++V+W MI GY +GY +A+ L+ D + P+ +T +VL+A
Sbjct: 571 GAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTAC 630
Query: 358 AQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEK-D 411
+ ++ G M+ + L+ YT I +D + + I +T K D
Sbjct: 631 SHSALVDEGVEIFSSMLQKFEVVPKLDHYTCI---IDCLGRVGRFNEVEVILDTMPYKDD 687
Query: 412 VIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
I W ++S + A SL A + LH + + +S YV
Sbjct: 688 TIVWEVVLSSCR-------------VHANVSL-AKRAAEELHRLNPR----NSAPYV--L 727
Query: 472 LLNFYAKCGDAQSARMVFDAMREK 495
L N Y+ G A++V D M +
Sbjct: 728 LANMYSSMGRWDDAQVVRDLMSDN 751
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 196/444 (44%), Gaps = 71/444 (15%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+E + L +L+ +C ++L K +H I + + ++ L L+D+Y KC I A
Sbjct: 1 MEVKSLNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAH 60
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT----------------------DKK 339
VFD++ ++ S+ A++ + +S A +LF +++
Sbjct: 61 HVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQ 120
Query: 340 WADFF----------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
D + P+H+T A+V SA L ++N GR H L +++G + + V NAL+
Sbjct: 121 ALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALL 180
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAV 431
MY KC + DA +FE E + + + +++ GL + D+V
Sbjct: 181 CMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSV 240
Query: 432 TLVSVISACAS------------LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+L +++ CA L G +H + K G ++++ +LL+ YAK
Sbjct: 241 SLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHG-FERDLHLCNSLLDMYAKT 299
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
GD SA VF+ + + + V+W+ MI GYG + D +L F M +P++V + +L
Sbjct: 300 GDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINML 359
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE-- 597
+AC +G V G + F M PS+ + ++ ++ EA+E M +
Sbjct: 360 TACVKSGDVKVGRQIFDCMSS-----PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQ 414
Query: 598 -PDVSLFGAFLHGCGLYSRFDLGE 620
PD + L C + G+
Sbjct: 415 NPDRTTLAIILSSCAELGLLEAGK 438
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 200/653 (30%), Positives = 313/653 (47%), Gaps = 67/653 (10%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + +L + H L + GL + L+ MY G V A +FD MP+P
Sbjct: 46 SVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSP 105
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL--------RD 161
+ SF M+ D + + M + D S VL AC + R
Sbjct: 106 NEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARA 165
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
I +H +V+ G G D V LVD+YAK + + +VF+ ++VSW +I G
Sbjct: 166 IQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITG 225
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
Y Q C + + + M+E E N++T +++ +C K R
Sbjct: 226 YGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKAR-------------------- 265
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
++ AR++FD++ + +W ++ GY Q + + LF +
Sbjct: 266 ---------------DVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQH 310
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIAD 399
+ P+ T+A +LS+ ++LGN +G+ VHS +RL L D V + L+D+Y+KC +
Sbjct: 311 QNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGI 370
Query: 400 ARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACAS 442
A IF +E+DV+ WNS+ISGL ++ + P + S+I+ CA
Sbjct: 371 ALIIFNMMTERDVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCAR 430
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L ++ G +HA K G NVYVG +L++ YAK G+ AR+ F+ M KN V W+
Sbjct: 431 LSSIPQGRQMHAQVLKDGY-DQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVAWNE 489
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI GY G G ++ LF ML + +P+ V F +L+ CSH+G+V E F SM ++
Sbjct: 490 MIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAVTFFNSMESNY 549
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P ++HY C++D LARA R E + MP + D L+ L C ++ +LGE
Sbjct: 550 GITPLVEHYTCLIDALARAARFAEVEAVIGKMPYKDDPILWEVLLAACVVHHNAELGEFS 609
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
K + L P YVL+SN+YA+ GR + VR LM RG+ K G S V+
Sbjct: 610 AKHLFRLDPKNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVN 662
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 256/545 (46%), Gaps = 66/545 (12%)
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP+ + S+ +I + + +E Y+ M + NF + VL AC + +D+G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+ H VKVG FV GL+ MY KC + + ++FD N VS+T+M+ G Q
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQG 120
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK--------LRALHQGKWLHGYILKIG 276
+ L LF RM + + + + S++ ACA+ RA+ + +H +++ G
Sbjct: 121 GAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKG 180
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+ H+ +L+D+Y K + +A VF+ L S+ +VSW +I GY Q G ++A+++
Sbjct: 181 FGSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLE 240
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHV 396
+ + F PN VT +++L++ K
Sbjct: 241 FMQESGFEPNEVTYSNMLASC----------------------------------IKARD 266
Query: 397 IADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISA 439
+ AR +F+ + V WN+++SG NV PD TL ++S+
Sbjct: 267 VPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSS 326
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C+ LG ++G +H+ S + LL ++++V + L++ Y+KCG A ++F+ M E++ V
Sbjct: 327 CSRLGNFELGKQVHSASVRL-LLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTERDVVC 385
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W++MI G + + M + P E + ++++ C+ + +G + +
Sbjct: 386 WNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVL 445
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
+D + ++ ++D+ A++G +++A F M ++ V+ + +HG Y++ G
Sbjct: 446 KD-GYDQNVYVGCSLIDMYAKSGNMDDARLFFNCMIVKNLVA-WNEMIHG---YAQNGFG 500
Query: 620 EVMIK 624
E ++
Sbjct: 501 EKAVE 505
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 144/490 (29%), Positives = 242/490 (49%), Gaps = 51/490 (10%)
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGK 266
D+N VSW ++IA ++ E L ++ M +EG N TL S+++AC + AL G+
Sbjct: 3 DRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTN-FTLASVLSACGAVAALDDGR 61
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
HG +K+G++ + + LL MY KCG++ DA +FD + S + VS+TAM+ G Q G
Sbjct: 62 RCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGG 121
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQ--LGNLNMGRM------VHSLGIRLGL 378
D AL+LF + V ++SVL A AQ G+ N+ R +H+L +R G
Sbjct: 122 AVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGF 181
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVI 437
D V N+LVD+YAK + +A +FE+ S +++WN +I+G
Sbjct: 182 GSDQHVGNSLVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGY--------------- 226
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
LG + + + + G + V + +L K D SAR +FD + + +
Sbjct: 227 ---GQLGCYERAMEVLEFMQESGFEPNEVTY-SNMLASCIKARDVPSARAMFDKIPKPSV 282
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
TW+ ++ GYG + ++ LF M ++ VQP+ ILS+CS G G + +
Sbjct: 283 TTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRLGNFELGKQVHSA 342
Query: 558 MCR----DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
R + FV S ++D+ ++ G++ AL + NM E DV + + + G ++
Sbjct: 343 SVRLLLHNDMFVAS-----GLIDIYSKCGQVGIAL-IIFNMMTERDVVCWNSMISGLAIH 396
Query: 614 SRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ---RGLSKS 668
S + +K+M E + P ++ Y ++ NL A R + Q R++ Q G ++
Sbjct: 397 SLSEEAFDFLKQMRENGMFPTESSYASMI-NLCA---RLSSIPQGRQMHAQVLKDGYDQN 452
Query: 669 --PGCSLVDL 676
GCSL+D+
Sbjct: 453 VYVGCSLIDM 462
>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
Length = 849
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 196/618 (31%), Positives = 319/618 (51%), Gaps = 31/618 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V YG G VK AR VF S+ +P+ YS+ +++ Y N +K ++E + M +
Sbjct: 122 VVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPN 181
Query: 146 NFVFSKVLKACCELRDIDEGMKVH------CEIVKVGGPDSFVLTGLVDMYAKCRDIGSS 199
+ V+ A EL + DE K+H C++ D ++T L+DMYAKC DI +
Sbjct: 182 AVTLATVIGAVSELGNWDEARKIHARAAATCQLTY----DVVLVTALIDMYAKCGDIFHA 237
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
VFD+ +K++ +MI+ Y+Q + + FNR++ ++ NQ+T L ACA
Sbjct: 238 EVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATN 297
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ H + + + + TAL+ MY +CG++ DAR VFD + ++V+W MI
Sbjct: 298 GVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMI 357
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY Q GY D+AL+L+ + A P+ +T +VL + + +L GR +H + G +
Sbjct: 358 AGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYD 417
Query: 380 D-YTVINALVDMYAKCHVIADARYIFE--TTSEKDVIAWNSIISGLDDN----------- 425
TV++AL+ MY+ C + DA +F T+ VI+W ++++ L N
Sbjct: 418 SSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFR 477
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
V + VT VS I AC+S+GA+ G ++ G L +V +GT+L+N Y KC
Sbjct: 478 KMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLI-DVVLGTSLINLYGKC 536
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G A VF + KN VTW+ ++ G+ S L +M + QPNE+ +L
Sbjct: 537 GRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNML 596
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
CSH G+V + F SM VP+ +HY C+VDLL R+G+LEE F+ + P D
Sbjct: 597 FGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLD 656
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
L+ + L C ++S + G +++L L P A YVL+SN++A+ G V + +L
Sbjct: 657 SVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKL 716
Query: 660 MKQRGLSKSPGCSLVDLD 677
+R + K S ++++
Sbjct: 717 AGERAMKKEQSRSYIEVN 734
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 210/445 (47%), Gaps = 23/445 (5%)
Query: 166 MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++ H K D +L +V+ Y KC + +R VF NV SWT ++A Y QN
Sbjct: 102 IQAHISHSKRFAGDRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNG 161
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI-GIEINSHLV 284
+ L L +M V N +TL +++ A ++L + + +H + + LV
Sbjct: 162 HHKTVLELLRQMDLLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLV 221
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
TAL+DMY KCG+I A VFD+ + DL AMI Y Q GY A+ F + +
Sbjct: 222 TALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQ 281
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYI 403
PN VT A + A A G + R+ H I L V+N ALV MY++C + DAR +
Sbjct: 282 PNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRV 341
Query: 404 FETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAV 446
F+ K+V+ WN +I+G V PD +T V+V+ +C+ +
Sbjct: 342 FDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHL 401
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD--AMREKNTVTWSAMI 504
G +H + G S++ V +AL+ Y+ CG A VF + ++W+AM+
Sbjct: 402 AAGRDIHKHVVDAG-YDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAML 460
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G+G +LALF M E V+ N V F + + ACS G + EG F +
Sbjct: 461 TALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHL 520
Query: 565 VPSMKHYVCMVDLLARAGRLEEALE 589
+ + +++L + GRL+ ALE
Sbjct: 521 IDVVLG-TSLINLYGKCGRLDYALE 544
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 181/384 (47%), Gaps = 21/384 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+ MY G + +A VFD N D MI Y D V + ++ +
Sbjct: 222 TALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQ 281
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
+ ++ + +AC + H C I+ PD V T LV MY++C + +R+V
Sbjct: 282 PNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRV 341
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD KNVV+W MIAGY Q E L L+ M VE ++IT +++ +C+ L
Sbjct: 342 FDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHL 401
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI--DLVSWTAMIV 320
G+ +H +++ G + + +++AL+ MY CG++ DA VF + + ++SWTAM+
Sbjct: 402 AAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLT 461
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LE 379
T++G AL LF N VT S + A + +G L G + I G L
Sbjct: 462 ALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLI 521
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
D + +L+++Y KC + A +F S K+++ WN+I++ N
Sbjct: 522 DVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMD 581
Query: 426 ---VSPDAVTLVSVISACASLGAV 446
P+ +TL++++ C+ G V
Sbjct: 582 LDGAQPNEMTLLNMLFGCSHNGLV 605
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 147/307 (47%), Gaps = 7/307 (2%)
Query: 55 LLGLCKSTG---SLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L C + G + H I+ L D NT LVSMY G ++ AR VFD MP +
Sbjct: 290 LFRACATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKN 349
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
++ VMI Y + ++ Y M E D F VL++C + G +H
Sbjct: 350 VVTWNVMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409
Query: 171 EIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDE--TLDKNVVSWTSMIAGYVQNDCA 227
+V G S VL+ L+ MY+ C +G + VF + T +V+SWT+M+ +N
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ L LF +M V N +T S + AC+ + AL +G + ++ G I+ L T+L
Sbjct: 470 RSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSL 529
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+++Y KCG + A VF L ++V+W ++ +Q+G + +L + PN
Sbjct: 530 INLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNE 589
Query: 348 VTIASVL 354
+T+ ++L
Sbjct: 590 MTLLNML 596
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 2/182 (1%)
Query: 406 TTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
T S++DV + S + N V + +S G V ++ A+ + + +
Sbjct: 58 TLSDEDVK--QKLASLEEQNQKSGFVDPAAYVSLLKQSGDVTALKTIQAHISHSKRFAGD 115
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+ ++ Y KCG + AR+VF ++R N +W+ ++ Y G L L M
Sbjct: 116 RLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDL 175
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
V PN V T++ A S G E K + + ++D+ A+ G +
Sbjct: 176 LGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIF 235
Query: 586 EA 587
A
Sbjct: 236 HA 237
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/618 (30%), Positives = 322/618 (52%), Gaps = 28/618 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++ Y G AR + D MP + SF ++I Y L +E R+ + D
Sbjct: 49 LLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVD 108
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F ++ L AC + G VH + G FV LV MY+KC ++G +R+VFD
Sbjct: 109 RFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFD 168
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR--AL 262
+++ VSW S+++GYV+ +E + +F MR G + N LGS++ C+ +
Sbjct: 169 VAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTM 228
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+ +HG ++K G++ + LV+A++DMY K G + +A ++F + ++V + MI G+
Sbjct: 229 DIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGF 288
Query: 323 TQSG------YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++ +AL L+++ + P T +SVL A G L G+ +H I+
Sbjct: 289 CRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKY 348
Query: 377 GL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
ED + +AL+D+Y + D F ++ + D++ W +++SG N
Sbjct: 349 TFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLF 408
Query: 426 -------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ PD T+ SV++ACASL + G + ++TK G V +G + ++ YA+
Sbjct: 409 HESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTV-MGNSCVHMYAR 467
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
GD +A F M + V+WSA+I + G +L F +M++ +V PNE+ F +
Sbjct: 468 SGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGV 527
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L+ACSH G+V EG + + +M +D+ P++KH C+VDLL RAGRL +A F+ N
Sbjct: 528 LTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHA 587
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
D ++ + L C ++ + G+++ +++EL P + YV++ N+Y G ++ R+
Sbjct: 588 DPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRD 647
Query: 659 LMKQRGLSKSPGCSLVDL 676
LMKQRG+ K PG S ++L
Sbjct: 648 LMKQRGVKKEPGLSWIEL 665
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 189/564 (33%), Positives = 304/564 (53%), Gaps = 58/564 (10%)
Query: 167 KVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H + + G P + ++ L+D+++ I +R V D+T SW S+I Y +
Sbjct: 17 QIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSPTDFSWNSLIRAYTVHG 72
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
Q L L+ +M + + T ++ AC+ L ++ +G+ +H ++L++G + +
Sbjct: 73 SPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCN 132
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-------- 337
+L+DMY KC + AR+ +D++ D VSW ++I GY Q G +KA LF +
Sbjct: 133 SLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVV 192
Query: 338 ---------KKWADFF-----------------PNHVTIASVLSASAQLGNLNMGRMVHS 371
K DF PN T+ +LSA + L N +GR +
Sbjct: 193 CWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSV 252
Query: 372 -LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDD 424
+ + + ++ AL+DMY+KC + A IF+ S K++ +WN+II+G L++
Sbjct: 253 FIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEE 312
Query: 425 -----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
+V P+ +TLV+V+SACA LGA+++G +H Y + GL NV + TAL+
Sbjct: 313 AIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGL-DLNVILATALV 371
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ YAKCG A ++F EK+ W+AMI G GDG SLA+FS M+ VQPN+V
Sbjct: 372 DMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDV 431
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F +LSAC+H+G+V EG F SM P ++HY CMVDLL RAG L+EA E ++N
Sbjct: 432 TFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQN 491
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M I PD ++GA L C ++ +L + + + ++ + +L+SN+YAS GRW V
Sbjct: 492 MLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLSNIYASSGRWKDV 551
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+VR +K++ + K GCS V++D
Sbjct: 552 ARVRRQVKEKRIKKPSGCSWVEVD 575
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 163/506 (32%), Positives = 248/506 (49%), Gaps = 57/506 (11%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
L+LL S + HA ++ GL T L+ + YAR V D P+P +
Sbjct: 3 LSLLRTATSLTQIHQIHAQTLIHGL---PLQTHLIPKLIDLHSIDYARFVLDQTPSPTDF 59
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
S+ +IR Y ++ ++ + Y M + + NF F VLKAC L + EG ++H +
Sbjct: 60 SWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHV 119
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+++G G D FV L+DMY KC + S+R +D+ ++ VSW S+I+GYVQ ++
Sbjct: 120 LRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKAR 179
Query: 232 VLFNRM-----------------REG-FVE----------------GNQITLGSLVTACA 257
LF M +EG FVE N T+ L++AC+
Sbjct: 180 DLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACS 239
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
L G++L +I I +N+ LVTAL+DMY KCG++ A +FD + +L SW A
Sbjct: 240 TLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNA 299
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
+I G Q G ++A+ L+ K PN +T+ +VLSA A LG L +GR VH R G
Sbjct: 300 IITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNG 359
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------- 422
L+ + + ALVDMYAKC I DA IF TSEKDV WN++I GL
Sbjct: 360 LDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVFS 419
Query: 423 ---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
V P+ VT + V+SAC G V+ G + + LS + +++ +
Sbjct: 420 QMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRA 479
Query: 480 GDAQSA-RMVFDAMREKNTVTWSAMI 504
G + A +V + + +++ W A++
Sbjct: 480 GHLKEAYELVQNMLIPPDSIIWGALL 505
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 205/435 (47%), Gaps = 43/435 (9%)
Query: 76 GLTNDKCNTKLVSMYGSFGHVKYARSVFDSMP-NPDFYSFQVMIRWYFLNDLYKDIVEFY 134
G ++ ++S Y +G V+ AR +F+ MP + + MI Y D VE
Sbjct: 155 GFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEG---DFVEML 211
Query: 135 KCMRKRLKEHDNF-----VFSKVLKACCELRDIDEG--MKVHCEIVKVGGPDSFVLTGLV 187
R+ L D +L AC L + + G + V ++ K+ ++ ++T L+
Sbjct: 212 SLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIP-LNTILVTALI 270
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
DMY+KC D+ + ++FD KN+ SW ++I G VQ +E + L+ M+ V+ N+I
Sbjct: 271 DMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEI 330
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TL ++++ACA L AL G+ +H Y+ + G+++N L TAL+DMY KCG I DA +F +
Sbjct: 331 TLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKT 390
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
D+ W AMI+G G +L +F+ A PN VT VLSA G + GR
Sbjct: 391 SEKDVALWNAMILGLAYHGDGRDSLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGR 450
Query: 368 -----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
M G+ LE Y +VD+ + + +A + +
Sbjct: 451 VQFSSMADKHGLSPKLEHYA---CMVDLLGRAGHLKEAYELVQNML-------------- 493
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL--NFYAKCG 480
+ PD++ +++SAC +++ + ++ + S + +G +L N YA G
Sbjct: 494 ---IPPDSIIWGALLSACRIHRNLELADKI----SETIMASQDPNIGFCILLSNIYASSG 546
Query: 481 DAQSARMVFDAMREK 495
+ V ++EK
Sbjct: 547 RWKDVARVRRQVKEK 561
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 65/304 (21%)
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
Q+ ++ ++H L ++ L I L+D+ H I AR++ + T +WNS+
Sbjct: 14 QIHQIHAQTLIHGLPLQTHL-----IPKLIDL----HSIDYARFVLDQTPSPTDFSWNSL 64
Query: 419 ISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I L + P T V+ AC++LG+V G +H + + G
Sbjct: 65 IRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVLRLGF 124
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA------------------- 502
S+++V +L++ Y KC SAR +D M ++ V+W++
Sbjct: 125 -GSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFE 183
Query: 503 -------------MIGGYGMQGDGGGSLALFSDML--NEEVQPNEVIFTTILSACSHTGM 547
MI GYG +GD L+LF ML +EVQPN +LSACS
Sbjct: 184 EMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCN 243
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
G F S+ D +P V ++D+ ++ G +E+A + + + ++ + A
Sbjct: 244 YEVGR--FLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCK-NLPSWNAI 300
Query: 607 LHGC 610
+ GC
Sbjct: 301 ITGC 304
>gi|242066372|ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
gi|241934306|gb|EES07451.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
Length = 706
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 210/653 (32%), Positives = 334/653 (51%), Gaps = 66/653 (10%)
Query: 66 KAFHALLIVDGLTNDK-----CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW 120
A HA L+ G L+ Y G + A + D P D ++ +I
Sbjct: 46 SALHAALLKSGALRSPQAPLAATNSLLHAYLQCGLLSRALRLLDGTPRRDAATYASLISA 105
Query: 121 YF-----LNDL--YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ L+ L + D+++ + C ++ ++ F + VL+AC RD G VH +V
Sbjct: 106 HCRLGAPLDALRAFLDMLD-WGCSDAAVRPNE-FTAAAVLQACGLARDERLGRMVHGYLV 163
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
G D FV+ LV+MYAK D+ S+R++ ++VVSWT++I+G V N +EGL
Sbjct: 164 AGGFCGDPFVVGSLVNMYAKAGDVVSARRLVLGLPCRDVVSWTAIISGCVLNGMLEEGLE 223
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
+F M E V N +T+ S++ AC+ + A +H ++ + +E ++ +V +L+ MY
Sbjct: 224 VFVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALVVLLELEHDASVVNSLIMMYA 283
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K G + +A +F Y +SG + N +A+
Sbjct: 284 KNGFVEEAIWLFRGF--------------YLKSG---------------NVCSNEDVLAA 314
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
VL G++ G VH+ I++G ++ N+L+ MYA+ I A ++FE KD
Sbjct: 315 VLYGCTISGSVKNGVGVHAHTIKIGAFPSISIENSLMGMYARFEQIDAAHFVFEGMKVKD 374
Query: 412 VIAWNSIISGLDDN-------------------VSPDAVTLVSVISACASLGAVQVGSSL 452
+++WN+IIS L + ++PD VT++S++ AC++ G + G L
Sbjct: 375 IVSWNTIISCLAKSDRVNEAMELFSVLHAAAGGLAPDFVTVLSILQACSNAGLLHQGQML 434
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H Y K G + +V + AL+ YAK G A M+F+ M K+ V+W++MI YGM GD
Sbjct: 435 HGYIMKSGFVY-DVSICNALITMYAKLGRIDFAEMIFERMDIKDLVSWNSMINAYGMHGD 493
Query: 513 GGGSLALFSDMLNEEVQ-PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G +L +F + + PN + F +++SACSH+G++ EG+KCF SM RD PSM HY
Sbjct: 494 GHLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLISEGYKCFESMGRDHSIEPSMDHY 553
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
C+VDLL R+GR EA EF+ +MP+ P+ S++G L C L+ DL E K++ L P
Sbjct: 554 ACVVDLLGRSGRFAEAEEFIRDMPVHPNSSIWGPLLAACQLHGNVDLAEKAAKELSALEP 613
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSF 684
+ + V +SN YAS GRW ++R M++ GL K G S VD+ F F
Sbjct: 614 ESDIWRVSLSNTYASAGRWRDAAKIRTEMRRVGLRKETGWSFVDVGGVESFKF 666
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 211/485 (43%), Gaps = 55/485 (11%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L GL + + H L+ G D LV+MY G V AR + +P D
Sbjct: 143 LQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKAGDVVSARRLVLGLPCRDV 202
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ +I LN + ++ +E + M + +N V++AC + + VH
Sbjct: 203 VSWTAIISGCVLNGMLEEGLEVFVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHAL 262
Query: 172 IVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+V + + D +VV+ S+I Y +N +E +
Sbjct: 263 VV----------------------------LLELEHDASVVN--SLIMMYAKNGFVEEAI 292
Query: 232 VLFN--RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
LF ++ G V N+ L +++ C ++ G +H + +KIG + + +L+
Sbjct: 293 WLFRGFYLKSGNVCSNEDVLAAVLYGCTISGSVKNGVGVHAHTIKIGAFPSISIENSLMG 352
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT--DKKWADFFPNH 347
MY + I A VF+ + D+VSW +I +S ++A++LF+ P+
Sbjct: 353 MYARFEQIDAAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEAMELFSVLHAAAGGLAPDF 412
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFET 406
VT+ S+L A + G L+ G+M+H ++ G + D ++ NAL+ MYAK I A IFE
Sbjct: 413 VTVLSILQACSNAGLLHQGQMLHGYIMKSGFVYDVSICNALITMYAKLGRIDFAEMIFER 472
Query: 407 TSEKDVIAWNSIISGL----DDNVS--------------PDAVTLVSVISACASLGAVQV 448
KD+++WNS+I+ D +++ P+A+T VSVISAC+ G +
Sbjct: 473 MDIKDLVSWNSMINAYGMHGDGHLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLISE 532
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD-AQSARMVFDAMREKNTVTWSAMIGGY 507
G + + ++ +++ + G A++ + D N+ W ++
Sbjct: 533 GYKCFESMGRDHSIEPSMDHYACVVDLLGRSGRFAEAEEFIRDMPVHPNSSIWGPLLAAC 592
Query: 508 GMQGD 512
+ G+
Sbjct: 593 QLHGN 597
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 7/124 (5%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFD 104
+ L++L C + G L + H ++ G D CN L++MY G + +A +F+
Sbjct: 413 VTVLSILQACSNAGLLHQGQMLHGYIMKSGFVYDVSICNA-LITMYAKLGRIDFAEMIFE 471
Query: 105 SMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
M D S+ MI Y ++ D + + F++ + F V+ AC I
Sbjct: 472 RMDIKDLVSWNSMINAYGMHGDGHLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLIS 531
Query: 164 EGMK 167
EG K
Sbjct: 532 EGYK 535
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 200/634 (31%), Positives = 329/634 (51%), Gaps = 33/634 (5%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H +I G + + L++MY G ++ A SVF ++ +PD S+ ++ +
Sbjct: 93 RQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGF--- 149
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+ ++ + F M + D+ ++ L C + + G ++H +K G D FV
Sbjct: 150 EKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGFKGDVFVG 209
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ--NDCAQEGLVLFNRMREGF 241
LV MY++ + +R+VFDE ++ VSW++MI GY Q ++ Q LV +REG
Sbjct: 210 NALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREG- 268
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V+ + + + ++ C R L GK +H +K G E ++ + L+ Y KC I DA+
Sbjct: 269 VKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAK 328
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+VF+ + +++SWT MI S Y + A+ LF + +PN VT +L A
Sbjct: 329 AVFELINDRNVISWTTMI-----SLYEEGAVSLFNKMRLDGVYPNDVTFIGLLHAITIRN 383
Query: 362 NLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+ G MVH L I+ + + TV N+L+ MYAK + DA +F +++I+WN++IS
Sbjct: 384 MVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALIS 443
Query: 421 GLDDNV----------------SPDAVTLVSVISACASLGAVQV--GSSLHAYSTKQGLL 462
G N P+ T SV++A ++ + + G H++ K GL
Sbjct: 444 GYAQNALCQEALEAFLYAIMEYKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLN 503
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ G ALL+ YAK G Q ++ VF+ +++ W+A+I GY GD + LF +
Sbjct: 504 VDPIISG-ALLDMYAKRGSIQESQRVFNETSKQSQFAWTALISGYAQHGDYESVIKLFEE 562
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M E ++P+ VIF ++L+ACS MV G + F M +D P +HY CMVD+L RAG
Sbjct: 563 MEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIEPEGEHYSCMVDMLGRAG 622
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
RLEEA E + +P P VS + L C + ++ E + +++ P ++ YVL+SN
Sbjct: 623 RLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEMAERIANDLMKKEPLESGPYVLMSN 682
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
LYA G W +V +VR+ M++RG+ K G S VD+
Sbjct: 683 LYAQKGDWEKVAKVRKEMRERGVMKEIGFSWVDV 716
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 166/643 (25%), Positives = 285/643 (44%), Gaps = 78/643 (12%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK-CMRKRLKEH-DNF 147
+ F ++ ++FD P P+ SF ++ Y D + F+K R L + D F
Sbjct: 17 FNFFRSFQHDHNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEF 76
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDET 206
LKACC + G ++H ++ G ++ L++MY K + + VF
Sbjct: 77 TLVLALKACCGFPKL--GRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNL 134
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
D ++VSW ++++G+ +++ A L RM V+ + +T + ++ C G
Sbjct: 135 HDPDIVSWNTILSGFEKSENA---LSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGW 191
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
LH LK G + + + AL+ MY + ++ DAR VFDE+ S D VSW+AMI GY Q G
Sbjct: 192 QLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEG 251
Query: 327 YPD-KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI- 384
+A+ +F ++V I LS NL +G+ +H L ++ G E +T +
Sbjct: 252 DNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVG 311
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD------------DNVSPDAVT 432
N L+ Y+KC +I DA+ +FE ++++VI+W ++IS + D V P+ VT
Sbjct: 312 NVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYEEGAVSLFNKMRLDGVYPNDVT 371
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ ++ A V+ G +H K +S + VG +L+ YAK Q A VF +
Sbjct: 372 FIGLLHAITIRNMVEQGLMVHGLCIKADFVSE-LTVGNSLITMYAKFEFMQDASRVFIEL 430
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS--------- 543
+ ++W+A+I GY +L F + E +PNE F ++L+A S
Sbjct: 431 PYREIISWNALISGYAQNALCQEALEAFLYAI-MEYKPNEYTFGSVLNAISAGEDISLKH 489
Query: 544 ----HT------------------------GMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
H+ G + E + F + +F + ++
Sbjct: 490 GQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFA-----WTALI 544
Query: 576 DLLARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH-- 630
A+ G E ++ E M I+PD +F + L C D+G M++ H
Sbjct: 545 SGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMI 604
Query: 631 -PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
P+ Y +V L GR R+ + E++ + + PG S
Sbjct: 605 EPEGEHYSCMVDML----GRAGRLEEAEEILAR--IPGGPGVS 641
>gi|302142318|emb|CBI19521.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 191/564 (33%), Positives = 297/564 (52%), Gaps = 66/564 (11%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-RE 239
++ T +D Y K I ++ +F+E ++VVSW ++I GY +N + L +F +M RE
Sbjct: 194 YLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLRE 253
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK------ 293
GF Q TL LV +C + + QGK +HG+ +K G++++ + AL MY K
Sbjct: 254 GF-PPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKFSWNTM 312
Query: 294 ---------------------------------------CGNIRDARSVFDELCSIDLVS 314
CGNI A +++ + +LVS
Sbjct: 313 IGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYAGCGNIESAGLLYNLMPQRNLVS 372
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
TAMI GY + G ++ FT P+ V + S+L + G +H+ G+
Sbjct: 373 LTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGL 432
Query: 375 RLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDDNV- 426
+ GL D V+N L+ MY+K I +F EK +I+WNS+IS D +
Sbjct: 433 KTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAME 492
Query: 427 ----------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
SPDA+T+ S+++ C+ +G +Q G LH Y + L + ++ TAL++ Y
Sbjct: 493 LFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMED-FLETALVDMY 551
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
KCG +SA VF +++E TW+ MI GYG+ G +L+ +S+M + ++P+ + F
Sbjct: 552 IKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFL 611
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+LSAC+H G+V EG + F SM DF +P ++H CMVDLL+RAG LEEA+ F++NM +
Sbjct: 612 GVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEV 671
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
EPD +++GA L C ++ LGE + K++L L YVL+SNLYAS GRW V +V
Sbjct: 672 EPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVARV 731
Query: 657 RELMKQRGLSKSPGCSLVDLDIAN 680
R++MK G S G SL++ + N
Sbjct: 732 RKMMKDTGGDGSSGISLIEFFLGN 755
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 205/466 (43%), Gaps = 36/466 (7%)
Query: 69 HALLIVDGLTNDKCNTKLVSM----YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
A+L+ + ++ V++ Y G+++ A +++ MP + S MI Y
Sbjct: 324 EAMLVFKQMQKERVEVNYVTIIMCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEK 383
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+VE + M + + D +L + I G+ +H +K G D V+
Sbjct: 384 GNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVV 443
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
GL+ MY+K DI + +F E +K ++SW S+I+ +Q + + LF +MR
Sbjct: 444 NGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHS 503
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ IT+ SL+ C+++ L G+ LH Y+L+ +++ L TAL+DMY+KCG + A V
Sbjct: 504 PDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERV 563
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F + L +W MI GY SG+ +AL +++ + P+ +T VLSA G +
Sbjct: 564 FKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLV 623
Query: 364 NMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G+ R ED+ +I L +++ A ++ E ++I +
Sbjct: 624 WEGKRY----FRSMREDFGMIPGLQHNACMVDLLSRAGFLEE-----------AVIFVKN 668
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V PD+ +++++C +++G L S +YV + N YA G
Sbjct: 669 MEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYV--LMSNLYASKGRWD 726
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ 529
V M++ GDG ++L L +V+
Sbjct: 727 DVARVRKMMKDTG--------------GDGSSGISLIEFFLGNKVK 758
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 212/509 (41%), Gaps = 82/509 (16%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLV----------TACAKL 259
N+ + S+ + ++ + F R+ E V+ + +T L+ T
Sbjct: 112 NISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLTFSLLIKAYVADASSSTVIDSP 171
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+ + ++ K G +L TA LD Y K G I A+ +F+E+ D+VSW A+I
Sbjct: 172 NTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALI 231
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY+++GY AL++F F P T+ ++ + + + G+ +H GI+ GL+
Sbjct: 232 CGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLD 291
Query: 380 -DYTVINALVDMYAK--------------------------------------------- 393
D V NAL MYAK
Sbjct: 292 LDCRVKNALTSMYAKFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYAG 351
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSV 436
C I A ++ ++++++ ++ISG L + PDAV +VS+
Sbjct: 352 CGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSI 411
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ + G +HAY K G L ++ V L++ Y+K GD ++ +F M EK
Sbjct: 412 LHGFTDPTFIGSGLGIHAYGLKTG-LCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQ 470
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
++W+++I G ++ LF M P+ + ++L+ CS G + G +
Sbjct: 471 LISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHN 530
Query: 557 SMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYS 614
+ R+ M+ ++ +VD+ + GRLE A +++ EP ++ + + G GL
Sbjct: 531 YVLRNNL---DMEDFLETALVDMYIKCGRLESAERVFKSIK-EPCLATWNTMISGYGLSG 586
Query: 615 RFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+M E L PD+ + ++S
Sbjct: 587 HEHRALSCYSEMQEQGLKPDRITFLGVLS 615
>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g01510-like [Cucumis
sativus]
Length = 816
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 188/611 (30%), Positives = 314/611 (51%), Gaps = 21/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S + FG + AR +FD M S+ ++I Y ++ K+ Y MR+ E D
Sbjct: 80 MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD 204
+L EL + +++H ++K+G + V LVD Y K + + Q+F
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
L+K+ V++ S++ GY +E + LF + ++ + T +L++A L
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HG++LK N + ALLD Y K + + +F E+ +D +S+ +I Y
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAW 319
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G ++ LF ++ F A++LS + NL MGR +H I +G + V
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNV 426
NALVDMYAKC+ +A+ IF+ + K + W ++IS G++ V
Sbjct: 380 ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGV 439
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D T S++ ACA+L ++ +G LH+ + G +S NVY G+ALL+ YAKCG A
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMS-NVYSGSALLDTYAKCGCMTDAI 498
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F M E+N+V+W+A+I Y G+ G+L F M+ +P+ V F ++LSACSH G
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
V E F SM + ++ P +HY MVD+L R GR +EA + M MP EP ++ +
Sbjct: 559 FVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSV 618
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L+ C ++ +L + ++ + + A Y+ +SN+YA G+W V +V++ M+ RG+
Sbjct: 619 LNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGV 678
Query: 666 SKSPGCSLVDL 676
K P S V++
Sbjct: 679 RKVPAYSWVEI 689
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 233/464 (50%), Gaps = 30/464 (6%)
Query: 162 IDEGMKVHCEIV--KVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
++ G VH V ++ ++ L ++ + K + +R++FD +++ VSWT +I
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GY+Q++ ++E L+ MR G +E + +TL +L++ +L + +H +++K+G E
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
N + +L+D Y K + A +F + + D V++ +++ GY+ G ++A++LF +
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIA 398
+ P+ T A++LSA+ L + G+ VH ++ + + V NAL+D Y+K +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293
Query: 399 DARYIFETTSEKDVIAWNSIISG---------------------LDDNVSPDAVTLVSVI 437
+ +F E D I++N +I+ D P A TL+S+
Sbjct: 294 EVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFA-TLLSIA 352
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
++ +L ++G +H + G + V AL++ YAKC + A+ +FD + K+T
Sbjct: 353 TSSLNL---RMGRQIHCQAITVG-ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V W+AMI Y +G + +FSDM V ++ F +IL AC++ + G + +S
Sbjct: 409 VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLG-RQLHS 467
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
+ F+ ++ ++D A+ G + +A++ MP VS
Sbjct: 468 LLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 73/200 (36%), Gaps = 58/200 (29%)
Query: 473 LNFYAKCGDAQSARMVFDAMREKNT-------------------------------VTWS 501
+N + + GD A VFD M KNT V+W+
Sbjct: 50 VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGE 550
+IGGY + L++DM ++P+ V T+LS HT ++
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G++ +C +VD + L A + ++M + D F + + G
Sbjct: 170 GYEYNLMVCNS------------LVDAYCKTHCLYLASQLFKHM-LNKDTVTFNSLMTG- 215
Query: 611 GLYSRFDLGEVMIKKMLELH 630
YS L E I+ LELH
Sbjct: 216 --YSNEGLNEEAIELFLELH 233
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 177/564 (31%), Positives = 309/564 (54%), Gaps = 34/564 (6%)
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV-LTGLVDMYAKCR--DIGSSR 200
H N + S +L C +R++ K+H IV S + L+ L+D DI +
Sbjct: 3 HQNTILS-LLAKCKSMRELK---KLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYAD 58
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
V + + +V W SMI G+V + + ++L+ +M E + T ++ AC +
Sbjct: 59 LVLRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIA 118
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
GK +H I+K G E +++ T LL MYV C +++ VFD + ++V+WT +I
Sbjct: 119 DQDCGKCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIA 178
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
GY ++ P +ALK+F D + PN +T+ + L A A +++ GR VH + G +
Sbjct: 179 GYVKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDP 238
Query: 381 Y--------TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-------- 424
+ + A+++MYAKC + AR +F ++++++WNS+I+ +
Sbjct: 239 FMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEAL 298
Query: 425 ---------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
V PD T +SV+S CA A+ +G ++HAY K G+ ++++ + TALL+
Sbjct: 299 DLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGI-ATDISLATALLDM 357
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVI 534
YAK G+ +A+ +F ++++K+ V W++MI G M G G +L++F M + + P+ +
Sbjct: 358 YAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHIT 417
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ +L ACSH G+V E K F M + VP +HY CMVDLL+RAG EA ME M
Sbjct: 418 YIGVLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETM 477
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
++P+++++GA L+GC ++ + + ++ EL P ++ ++L+SN+YA GRW VN
Sbjct: 478 TVQPNIAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEEVN 537
Query: 655 QVRELMKQRGLSKSPGCSLVDLDI 678
R++MK + ++K+ G S V++ +
Sbjct: 538 VTRKVMKHKRITKTIGHSSVEMKL 561
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 159/486 (32%), Positives = 253/486 (52%), Gaps = 33/486 (6%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCN-TKLVS--MYGSFGHVKYARSVFDSMPNP 109
L+LL CKS LK H L++ +KL+ + FG + YA V + NP
Sbjct: 8 LSLLAKCKSMRELKKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLRQIHNP 67
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
Y + MIR + + + + Y+ M + D+F F VLKACC + D D G +H
Sbjct: 68 SVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCIH 127
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
IVK G D++ TGL+ MY C D+ S +VFD NVV+WT +IAGYV+N+
Sbjct: 128 SCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPY 187
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI-----NSHL 283
E L +F M VE N+IT+ + + ACA R + G+W+H I K G + NS++
Sbjct: 188 EALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSNI 247
Query: 284 V--TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ TA+L+MY KCG ++ AR +F+++ ++VSW +MI Y Q +AL LF D +
Sbjct: 248 ILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTS 307
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADA 400
+P+ T SVLS A L +G+ VH+ ++ G+ D ++ AL+DMYAK + +A
Sbjct: 308 GVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELGNA 367
Query: 401 RYIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACAS 442
+ IF + +KDV+ W S+I+GL D ++ PD +T + V+ AC+
Sbjct: 368 QKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACSH 427
Query: 443 LGAVQVGSSLHAYSTKQ-GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTW 500
+G V+ T+ G++ + G +++ ++ G + A + + M + N W
Sbjct: 428 VGLVEEAKKHFRLMTEMYGMVPGREHYG-CMVDLLSRAGHFREAERLMETMTVQPNIAIW 486
Query: 501 SAMIGG 506
A++ G
Sbjct: 487 GALLNG 492
>gi|15233645|ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38010
gi|4467107|emb|CAB37541.1| putative protein [Arabidopsis thaliana]
gi|7270784|emb|CAB80466.1| putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 286/520 (55%), Gaps = 27/520 (5%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D ++ +V K D S V ++ + S+ ++++ Y D + + +
Sbjct: 37 DDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKT 96
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+ T + AC K + +GK +HG + K+G + ++ +L+ Y CG
Sbjct: 97 FVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGE 156
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
R+A VF E+ D+VSWT +I G+T++G +AL F+ D PN T VL +
Sbjct: 157 SRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSK---MDVEPNLATYVCVLVS 213
Query: 357 SAQLGNLNMGRMVHSLGI-RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
S ++G L++G+ +H L + R L NAL+DMY KC ++DA +F +KD ++W
Sbjct: 214 SGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSW 273
Query: 416 NSIISGL------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
NS+ISGL + PD L SV+SACASLGAV G +H Y
Sbjct: 274 NSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL 333
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
G+ + ++GTA+++ YAKCG ++A +F+ +R KN TW+A++GG + G G SL
Sbjct: 334 TAGI-KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESL 392
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM-CRDFKFVPSMKHYVCMVD 576
F +M+ +PN V F L+AC HTG+V EG + F+ M R++ P ++HY CM+D
Sbjct: 393 RYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMID 452
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC-GLYSRFDLGEVMIKKMLELHPDKAC 635
LL RAG L+EALE ++ MP++PDV + GA L C + +L + ++ L++ + +
Sbjct: 453 LLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSG 512
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
YVL+SN++A++ RW V ++R LMK +G+SK PG S ++
Sbjct: 513 VYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 199/420 (47%), Gaps = 26/420 (6%)
Query: 53 LNLLGLCKSTGSLKAFHALLIV-DGLTNDKCNTKLVSMYG-SFGHVKYARSVFDSMPNP- 109
L L+ C S K LI D L +D K+V+ G S Y+ + S+ +
Sbjct: 10 LELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVL 69
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+S+ ++ Y + D + + YK D F F V KAC + I EG ++H
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 170 CEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ K+G D +V LV Y C + ++ +VF E ++VVSWT +I G+ + +
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E L F++M VE N T ++ + ++ L GK +HG ILK I+ AL+
Sbjct: 190 EALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNH 347
DMYVKC + DA VF EL D VSW +MI G +A+ LF+ + + P+
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDG 306
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
+ SVLSA A LG ++ GR VH + G++ D + A+VDMYAKC I A IF
Sbjct: 307 HILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNG 366
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
K+V WN+++ GL + P+ VT ++ ++AC G V G
Sbjct: 367 IRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEG 426
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 157/305 (51%), Gaps = 6/305 (1%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H ++ G +D LV YG G + A VF MP D S+ +I +
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL- 183
LYK+ ++ + M E + + VL + + + G +H I+K S
Sbjct: 186 GLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG 242
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFV 242
L+DMY KC + + +VF E K+ VSW SMI+G V + ++E + LF+ M+ +
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + L S+++ACA L A+ G+W+H YIL GI+ ++H+ TA++DMY KCG I A
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F+ + S ++ +W A++ G G+ ++L+ F + F PN VT + L+A G
Sbjct: 363 IFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGL 422
Query: 363 LNMGR 367
++ GR
Sbjct: 423 VDEGR 427
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 276/468 (58%), Gaps = 26/468 (5%)
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
G +E + ++ C LR L QG+ +H +I E + L+ +L+MY KCG++ +
Sbjct: 99 GSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEE 158
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A+ +FD++ + D+VSWT +I GY+QSG +AL LF F PN T++S+L AS
Sbjct: 159 AQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGT 218
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+ + GR +H+ ++ G + + V ++L+DMYA+ + +A+ IF + + K+V++WN++
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 278
Query: 419 ISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I+G L P T SV +ACAS G+++ G +HA+ K G
Sbjct: 279 IAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG 338
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
Y+G L++ YAK G + A+ VF + +++ V+W+++I GY G G +L LF
Sbjct: 339 -QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFE 397
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
ML +VQPNE+ F ++L+ACSH+G++ EG + ++ + + K + H+V +VDLL RA
Sbjct: 398 QMLKAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRA 456
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
GRL EA +F+E MPI+P +++GA L C ++ DLG +++ EL P + +VL+S
Sbjct: 457 GRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLS 516
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFS 683
N+YAS GR +VR++MK+ G+ K P CS V+++ +AND S
Sbjct: 517 NIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDS 564
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 124/390 (31%), Positives = 203/390 (52%), Gaps = 21/390 (5%)
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLV-DMYAKCRDIGSSRQ 201
E + ++SK+L C LR + +G +H I D VL + +MYAKC + ++
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FD+ K++VSWT +I+GY Q+ A E L LF +M + N+ TL SL+ A +
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
H G+ LH + LK G ++N H+ ++LLDMY + ++R+A+ +F+ L + ++VSW A+I G
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
+ + G + ++LF F P H T +SV +A A G+L G+ VH+ I+ G +
Sbjct: 282 HARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPI 341
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
I N L+DMYAK I DA+ +F ++D+++WNSIISG L
Sbjct: 342 AYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 401
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V P+ +T +SV++AC+ G + G K + + V +++ + G
Sbjct: 402 AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK-IEAQVAHHVTVVDLLGRAGRLN 460
Query: 484 SARMVFDAMREKNTVT-WSAMIGGYGMQGD 512
A + M K T W A++G M +
Sbjct: 461 EANKFIEEMPIKPTAAVWGALLGSCRMHKN 490
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 178/338 (52%), Gaps = 5/338 (1%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++MY G ++ A+ +FD MP D S+ V+I Y + + + + M + +
Sbjct: 146 ILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPN 205
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F S +LKA G ++H +K G + V + L+DMYA+ + ++ +F+
Sbjct: 206 EFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALH 263
KNVVSW ++IAG+ + + + LF +M R+GF E T S+ TACA +L
Sbjct: 266 SLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGF-EPTHFTYSSVFTACASSGSLE 324
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QGKW+H +++K G + +++ L+DMY K G+I+DA+ VF L D+VSW ++I GY
Sbjct: 325 QGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYA 384
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
Q G +AL+LF A PN +T SVL+A + G L+ G+ L + +E
Sbjct: 385 QHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVA 444
Query: 384 IN-ALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSII 419
+ +VD+ + + +A ++I E + W +++
Sbjct: 445 HHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 482
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 126/231 (54%), Gaps = 3/231 (1%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N + L+ MY + H++ A+ +F+S+ + S+ +I + + ++ + M
Sbjct: 240 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQML 299
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIG 197
++ E +F +S V AC +++G VH ++K GG P +++ L+DMYAK I
Sbjct: 300 RQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIK 359
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+++VF + +++VSW S+I+GY Q+ E L LF +M + V+ N+IT S++TAC+
Sbjct: 360 DAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACS 419
Query: 258 KLRALHQGKWLHGYILKIGIEIN-SHLVTALLDMYVKCGNIRDARSVFDEL 307
L +G++ + K IE +H VT ++D+ + G + +A +E+
Sbjct: 420 HSGLLDEGQYYFELMKKHKIEAQVAHHVT-VVDLLGRAGRLNEANKFIEEM 469
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 301/554 (54%), Gaps = 22/554 (3%)
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
H +VFS L C ++ G + HC +VK+G G D FV T L+DMYAKC ++ S+ +V
Sbjct: 112 HRQYVFS-ALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRV 170
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
+D+ + + +I+ Y +N + +F ++ N T +++ C + A+
Sbjct: 171 YDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAI 230
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+GK LH +++K+ + + ALL +Y KCG + +A VF+ L +++SWTA I G+
Sbjct: 231 QEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGF 290
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
Q G KALK F+ + + PN T + VL++ + + GRM H+ I+ G+
Sbjct: 291 YQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGV 350
Query: 383 VI-NALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISG-----------------LD 423
+ A++DMY+ + +A F+ ++WN++I+G +
Sbjct: 351 FVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVK 410
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
++V+ + T ++ AC+S ++ +H+ K + SN++V ++L+ Y +CG +
Sbjct: 411 EDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNV-ESNLHVASSLIEAYTQCGSLE 469
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+A VF + + + V+W+++I Y GD ++ L M+ E +P F T+LSACS
Sbjct: 470 NAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACS 529
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H+G+V EG + F SM +D+ P H CMVD+L RAG+LE AL+F++ + ++P S++
Sbjct: 530 HSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIW 589
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
L C S + E + +K+L+L P+ A YV +SN+YA GRW R LM+Q+
Sbjct: 590 RPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQK 649
Query: 664 GLSKSPGCSLVDLD 677
+SK PGCS ++++
Sbjct: 650 EISKEPGCSWIEVN 663
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 171/546 (31%), Positives = 284/546 (52%), Gaps = 49/546 (8%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
++K + R + G +H +V +G ++ L+ Y +C + ++R++FD+
Sbjct: 805 TYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKI 864
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ N+ W + + +E L F+ M++ + NQ L S++ AC L G+
Sbjct: 865 PNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGE 924
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+H ILK E ++++++AL+ MY KCG++ A VFD + DLV AM+ GY Q G
Sbjct: 925 NMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHG 984
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA 386
+ +AL L + A PN V+ ++++ +Q+G+ +M V L G+
Sbjct: 985 FVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGV-------- 1036
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPD 429
E DV++W S+ISG LD P
Sbjct: 1037 ----------------------EPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPS 1074
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+VT+ S++ AC ++ ++ G +H Y+ G + +VYV +AL++ YAKCG A+++F
Sbjct: 1075 SVTISSLLPACTNVANLRHGKEIHGYAMVIG-VEKDVYVRSALVDMYAKCGYISEAKILF 1133
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
M E+NTVTW+++I GY G ++ LF+ M + + + + FT +L+ACSH GMV
Sbjct: 1134 YMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVE 1193
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
G F M ++ P ++HY CMVDLL RAG+L EA + ++ MP+EPD ++GA L
Sbjct: 1194 LGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGA 1253
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C + +L EV + + EL P+ +L+SNLYA GRW +++++MKQR K P
Sbjct: 1254 CRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFP 1313
Query: 670 GCSLVD 675
GCS ++
Sbjct: 1314 GCSWIE 1319
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 220/468 (47%), Gaps = 52/468 (11%)
Query: 66 KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+A HA L++ GL KL+S Y G + AR +FD +PN + + V+
Sbjct: 823 RALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARR 882
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
Y++ + + M+K + FV +LKAC L D G +H I+K D++++
Sbjct: 883 GFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYII 942
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ L+ MY+KC + + +VFD +DK++V +M++GY Q+ E L L +M++ V+
Sbjct: 943 SALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVK 1002
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N ++ +L+ +++ + +V+ + + G
Sbjct: 1003 PNVVSWNTLIAGFSQVG-------------------DKSMVSEVFRLMTANG-------- 1035
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
D+VSWT++I G+ Q+ + + F + F P+ VTI+S+L A + NL
Sbjct: 1036 ----VEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANL 1091
Query: 364 NMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
G+ +H + +G+E D V +ALVDMYAKC I++A+ +F E++ + WNS+I G
Sbjct: 1092 RHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGY 1151
Query: 423 -----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
+ + D +T +V++AC+ G V++G SL ++ +
Sbjct: 1152 ANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPR 1211
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ +++ + G A + AM E + W A++G G+
Sbjct: 1212 LEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGN 1259
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 203/421 (48%), Gaps = 24/421 (5%)
Query: 56 LGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L C G + + +H ++ GL +D+ T L+ MY G V A V+D M + D
Sbjct: 120 LSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDA 179
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
+ +I Y N + + + + +++ +S +L C + I EG ++H
Sbjct: 180 ATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAH 239
Query: 172 IVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
+VK+ ++ V L+ +Y+KC + + VF+ +N++SWT+ I G+ Q+ ++
Sbjct: 240 VVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKA 299
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L F+ MRE +E N+ T ++ +C ++ G+ H ++K G+ + TA++DM
Sbjct: 300 LKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDM 359
Query: 291 YVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
Y G + +A F ++ + VSW A+I GY + +KA++ F D N T
Sbjct: 360 YSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFT 419
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+++ A + +L +HS I+ +E + V ++L++ Y +C + +A +F S
Sbjct: 420 YSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQIS 479
Query: 409 EKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSS 451
+ DV++WNSII +++ P + T ++V+SAC+ G VQ G
Sbjct: 480 DADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQE 539
Query: 452 L 452
Sbjct: 540 F 540
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 192/383 (50%), Gaps = 15/383 (3%)
Query: 55 LLGLCKSTGSL---KAFHALLI-VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L +C + ++ K HA ++ + L+ L+++Y G ++ A VF+S+ +
Sbjct: 220 MLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRN 279
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ I ++ + +K ++ + MR+ E + F FS VL +C ++D +G H
Sbjct: 280 IISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHT 339
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET-LDKNVVSWTSMIAGYVQNDCAQ 228
+++K G FV T ++DMY+ ++ + + F + + VSW ++IAGYV N+ +
Sbjct: 340 QVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIE 399
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ + F RM + V N+ T ++ AC+ +L +H ++K +E N H+ ++L+
Sbjct: 400 KAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLI 459
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
+ Y +CG++ +A VF ++ D+VSW ++I Y+Q+G P KA+ L P
Sbjct: 460 EAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSX 519
Query: 349 TIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADA-RY 402
T +VLSA + G + G+ MV I+ + T + +VD+ + + +A +
Sbjct: 520 TFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQ---PEETHCSCMVDILGRAGQLENALDF 576
Query: 403 IFETTSEKDVIAWNSIISGLDDN 425
I + T + W +++ N
Sbjct: 577 IKKLTMKPTASIWRPLLAACRYN 599
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 151/321 (47%), Gaps = 22/321 (6%)
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARY 402
FP+ + S LS + G + +GR H +++GL D V +L+DMYAKC + A
Sbjct: 110 FPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVR 169
Query: 403 IFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGA 445
+++ + D N +IS N P+ T ++++ C ++ A
Sbjct: 170 VYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISA 229
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+Q G LHA+ K LS VG ALL Y+KCG + A +VF+++R++N ++W+A I
Sbjct: 230 IQEGKQLHAHVVKMQYLSETA-VGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASIN 288
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
G+ GD +L FS M ++PNE F+ +L++C +G + F++
Sbjct: 289 GFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDG-RMFHTQVIKKGMA 347
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
+ ++D+ + G ++EA + + M + A + G L + + +
Sbjct: 348 SGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCR 407
Query: 626 MLELHPDKACYYVLVSNLYAS 646
M++ D AC SN++ +
Sbjct: 408 MVK--EDVACNEFTYSNIFKA 426
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 37 LDQTFASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGS 92
LDQ F S+ +LL C + +L K H +V G+ D + LV MY
Sbjct: 1067 LDQGFCP----SSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAK 1122
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
G++ A+ +F MP + ++ +I Y + + +E + M + + D+ F+ V
Sbjct: 1123 CGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAV 1182
Query: 153 LKAC 156
L AC
Sbjct: 1183 LNAC 1186
>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g49142
gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
Length = 686
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 278/492 (56%), Gaps = 16/492 (3%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ YA +D+ S+R+VFDE ++NV+ MI YV N EG+ +F M V +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T ++ AC+ + G+ +HG K+G+ + L+ MY KCG + +AR V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ D+VSW +++VGY Q+ D AL++ + + + T+AS+L A + N+
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
V + ++G + N ++ +Y K + +A ++ D
Sbjct: 260 -MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA--------------DG 304
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
PDAV++ SV+ AC A+ +G +H Y ++ L+ N+ + AL++ YAKCG + A
Sbjct: 305 FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKA 363
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R VF+ M+ ++ V+W+AMI YG G G ++ALFS + + + P+ + F T L+ACSH
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G++ EG CF M +K P ++H CMVDLL RAG+++EA F+++M +EP+ ++GA
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++S D+G + K+ +L P+++ YYVL+SN+YA GRW V +R +MK +GL
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 666 SKSPGCSLVDLD 677
K+PG S V+++
Sbjct: 544 KKNPGASNVEVN 555
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 210/470 (44%), Gaps = 54/470 (11%)
Query: 64 SLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+L+ H+ +I++ L N KL+ Y S V AR VFD +P + VMIR Y
Sbjct: 57 TLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYV 116
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
N Y + V+ + M D++ F VLKAC I G K+H KVG + F
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V GLV MY KC + +R V DE ++VVSW S++ GY QN + L + M
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T+ SL+ A + + V + DM+ K G
Sbjct: 237 ISHDAGTMASLLPAVSN--------------------TTTENVMYVKDMFFKMGK----- 271
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
LVSW MI Y ++ P +A++L++ + F P+ V+I SVL A
Sbjct: 272 --------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L++G+ +H R L + + NAL+DMYAKC + AR +FE +DV++W ++IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
D + PD++ V+ ++AC+ G ++ G S T ++
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 464 SNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
+ +++ + G + A R + D E N W A++G + D
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 170/368 (46%), Gaps = 23/368 (6%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
LG ++ +R L + +H I+ + NS L L+ Y ++ AR VFDE+
Sbjct: 45 LGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP 101
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
+++ MI Y +G+ + +K+F + P+H T VL A + G + +GR
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 369 VHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS 427
+H ++GL + N LV MY KC +++AR + + S +DV++WNS++ G N
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
D + C + +V++ H T LL + T + +
Sbjct: 222 FD-----DALEVCREMESVKIS---HDAGTMASLLPAVSNTTTE---------NVMYVKD 264
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F M +K+ V+W+ MIG Y ++ L+S M + +P+ V T++L AC T
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
+ G K + R K +P++ ++D+ A+ G LE+A + ENM DV + A +
Sbjct: 325 LSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMI 382
Query: 608 HGCGLYSR 615
G R
Sbjct: 383 SAYGFSGR 390
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
L +C+ S+K H + L NT + +V Y + +F M S+
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAVSNT-------TTENVMYVKDMFFKMGKKSLVSWN 278
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
VMI Y N + + VE Y M E D + VL AC + + G K+H I +
Sbjct: 279 VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 338
Query: 176 G-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
P+ + L+DMYAKC + +R VF+ ++VVSWT+MI+ Y + + + LF
Sbjct: 339 KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 398
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+++++ + + I + + AC+ L +G+
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 296/550 (53%), Gaps = 24/550 (4%)
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLV-DMYAKCRDIGSSRQVFDETLD 208
S LK +L + G ++H ++K+G + L V +Y KC++ ++FDE
Sbjct: 77 SHALKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136
Query: 209 KNVVSWTSMIAGYVQNDC----AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
KNVVSW ++I G V+ +C + G F +M + N ITL L+ A +L +
Sbjct: 137 KNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGI 196
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ LH +ILK G + N + +AL+D Y K G + +A+S FDE+ S DLV W M+ Y
Sbjct: 197 CRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYAL 256
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G KA +F + ++ T S++++ LG+ +G+ VH L IRL + D V
Sbjct: 257 NGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLV 316
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+ALVDMY+K I DAR F+ K++++W ++I G +
Sbjct: 317 ASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYT 376
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD + L S++S+C +L A +HAY + G + + + AL++ Y+KCG SA
Sbjct: 377 YPDELALASILSSCGNLSATSEVVQVHAYVVENGF-EAFLSIANALVSAYSKCGSIGSAF 435
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F ++ E + ++W++++G Y G + +F ML V+P++V F +LSAC+H G
Sbjct: 436 QSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGG 495
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
V EG F M ++ +P +HY C++DLL RAG L+EA+ + +MP+EP GAF
Sbjct: 496 FVLEGLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAF 555
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ L +K+ + P++ Y L+SN+YAS G W V +VR+LM++R
Sbjct: 556 LGACKVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDF 615
Query: 667 KSPGCSLVDL 676
K PGCS +++
Sbjct: 616 KVPGCSWMEI 625
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 162/318 (50%), Gaps = 8/318 (2%)
Query: 52 CLNLLGLCKST------GSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFD 104
C+ L GL +++ G + H ++ G +N + LV Y FG V A+S FD
Sbjct: 178 CITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFD 237
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
+ + D + VM+ Y LN + +K MR + DNF F+ ++ +C L
Sbjct: 238 EVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGL 297
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G +VH I+++ D V + LVDMY+K +I +R+ FD + KN+VSWT+MI GY Q
Sbjct: 298 GKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQ 357
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ +E + L M + +++ L S++++C L A + +H Y+++ G E +
Sbjct: 358 HGDGKEAMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSI 417
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
AL+ Y KCG+I A F + D++SWT+++ Y G + +++F +++
Sbjct: 418 ANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNV 477
Query: 344 FPNHVTIASVLSASAQLG 361
P+ V VLSA A G
Sbjct: 478 RPDKVAFLGVLSACAHGG 495
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 142/304 (46%), Gaps = 29/304 (9%)
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-L 378
+G ++ P+ D F +H L SA+LG L+ G+ +H+ I+LG
Sbjct: 51 LGGLRASLPETGFTNLVDSCSTHSFSSHA-----LKISAKLGFLHGGKQLHAHVIKLGNC 105
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
++ N ++ +Y KC D +F+ K+V++WN++I G+ +
Sbjct: 106 NLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHY 165
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
++P+ +TL ++ A L V + LH + K G SN +VG+AL++ YA
Sbjct: 166 FRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSG-FDSNCFVGSALVDSYA 224
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
K G A+ FD + ++ V W+ M+ Y + G G + +F M E V+ + FT+
Sbjct: 225 KFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTS 284
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
++++C G G G K + + F + +VD+ ++ +E+A + + M ++
Sbjct: 285 MINSCGVLGSCGLG-KQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVK 343
Query: 598 PDVS 601
VS
Sbjct: 344 NIVS 347
>gi|302764012|ref|XP_002965427.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
gi|300166241|gb|EFJ32847.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
Length = 495
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/487 (34%), Positives = 268/487 (55%), Gaps = 19/487 (3%)
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
FV L++MY KC + +R+ F+ +NV+SW++M+A Y Q + LVLF +M E
Sbjct: 10 EFVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEE 69
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
VE N++T S++ ACA A+ QG+ +H + +++ + TAL+ MY KC + +
Sbjct: 70 EGVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIE 129
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
AR VFD + D+V+W+ MI Y Q G+ +A++LF PN + + S+L A +
Sbjct: 130 ARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSS 189
Query: 360 LGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
G L G+M H L + G D + N L+ MY KC +A A+ +F +D+I+W+++
Sbjct: 190 AGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAM 249
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
++ + ++ V PD VT VS++ AC+ LGA+ G+ +H +G
Sbjct: 250 LAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGF 309
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
S +Y+ +L++ Y KCG Q+AR +FD M +N +TW+ MI G +L LF
Sbjct: 310 -QSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFE 368
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+M VQP++V F +I+ +CSH+G+V EG F M D F P ++H+V M+DLL R+
Sbjct: 369 EMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRS 428
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G+L EA E ME MP+EP V + L C ++ + + ML L P A YV S
Sbjct: 429 GKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGHAGPYVSFS 488
Query: 642 NLYASDG 648
N+ + G
Sbjct: 489 NILSGKG 495
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 209/445 (46%), Gaps = 26/445 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
L++MYG G V+ AR F+SM + + S+ M+ Y + + ++ M +
Sbjct: 13 GNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGV 72
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVK----VGGPDSFVLTGLVDMYAKCRDIGS 198
E + F VL AC +++G +H + VG V T LV MY KC +
Sbjct: 73 EPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLDVG---LIVGTALVGMYGKCSRLIE 129
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+RQVFD ++K+VV+W++MI+ Y Q +E + LF M V N+I L S++ AC+
Sbjct: 130 ARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSS 189
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
AL +GK H ++ G + L+ MY KCG++ A++VF + DL+SW+AM
Sbjct: 190 AGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAM 249
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
+ + G+ A F P++VT S+L A + LG L G ++H+ G
Sbjct: 250 LAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGF 309
Query: 379 EDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------------- 422
+ I N+L+DMY KC + AR IF+ S ++VI W ++I+
Sbjct: 310 QSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFEE 369
Query: 423 --DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
V PD V +S+I +C+ G V+ G + + V +L+ + G
Sbjct: 370 MEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSG 429
Query: 481 DAQSARMVFDAMR-EKNTVTWSAMI 504
A + + M E V W+ ++
Sbjct: 430 KLNEAEELMEFMPVEPGVVGWNTLL 454
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 172/346 (49%), Gaps = 12/346 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T LV MYG + AR VFD + D ++ MI Y ++ ++ + M
Sbjct: 114 GTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGV 173
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSR 200
+ + +L AC + EG H E+V + G + V TG L+ MY KC D+ S++
Sbjct: 174 RPNEIILMSILGACSSAGALAEGKMTH-ELVVICGFGADVSTGNTLIKMYGKCGDLASAK 232
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
VF ++++SW++M+A ++ ++ V F RM V+ + +T SL+ AC+ L
Sbjct: 233 AVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLG 292
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
AL +G +H I G + ++ +L+DMY KCG+++ AR +FD + ++++WT MI
Sbjct: 293 ALVEGNVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMIT 352
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSLGIR 375
Q +AL+LF + + A P+ V S++ + + G + GR MV
Sbjct: 353 ACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFT 412
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFE-TTSEKDVIAWNSIIS 420
G+E + ++D+ + + +A + E E V+ WN+++S
Sbjct: 413 PGVEHFV---GMLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLS 455
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/445 (37%), Positives = 250/445 (56%), Gaps = 20/445 (4%)
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
SL+ +C +A+ GK LH I ++GI N L T L+++Y C ++ +A +FD +
Sbjct: 5 ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK 64
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+L W MI GY +G + A+ L+ + P+ T VL A + L + G+ +
Sbjct: 65 RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP 428
H IR GLE D V AL+DMYAKC + AR +F+ E+DV+ WNS+++ N P
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184
Query: 429 DAV-----------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
D T V I+A A G + G LH YS + G SN V TA
Sbjct: 185 DESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGF-ESNDKVKTA 243
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ YAK G AR +F+ + EK V+W+AMI GY M G +L LF +M +V P+
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPD 302
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
+ F +L+ACSH G++ EG F SM DF P+++HY CM+DLL GRLEEA + +
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
M +EPD ++GA LH C ++ ++GE+ ++K++EL PD YV++SN+YA G+W
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWD 422
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDL 676
V ++R+LM +GL KS CS +++
Sbjct: 423 GVARLRDLMMNKGLKKSIACSWIEV 447
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 190/362 (52%), Gaps = 12/362 (3%)
Query: 66 KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA + G++ N TKLV++Y + A +FD + + + + VMIR Y N
Sbjct: 21 KQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMIRGYAWN 80
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
Y+ + Y MR D F F VLKAC L ++EG K+H ++++ G D FV
Sbjct: 81 GPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVG 140
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+DMYAKC + S+RQVFD+ +++VV W SM+A Y QN E L L M ++
Sbjct: 141 AALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLK 200
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ T + A A L QGK LHGY + G E N + TAL+DMY K G++ ARS+
Sbjct: 201 PTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSL 260
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+ L +VSW AMI GY G+ ++AL LF + K P+H+T VL+A + G L
Sbjct: 261 FELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMK-GKVLPDHITFVGVLAACSHGGLL 319
Query: 364 NMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNS 417
N G+ M+ I ++ YT ++D+ C + +A + I E E D W +
Sbjct: 320 NEGKMHFRSMISDFNIWPTVQHYT---CMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGA 376
Query: 418 II 419
++
Sbjct: 377 LL 378
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 210/413 (50%), Gaps = 25/413 (6%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
++ +L++C + I+ G ++H I +VG + + T LV++Y C + ++ +FD
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+N+ W MI GY N + + L+ +MR+ + ++ T ++ AC+ L A+ +GK
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H +++ G+E + + AL+DMY KCG + AR VFD++ D+V W +M+ Y+Q+G
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
PD++L L + P T ++ASA G L G+ +H R G E + V A
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------LDDNVSPDA 430
L+DMYAK + AR +FE EK V++WN++I+G + V PD
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVLPDH 303
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGL-LSSNVYVGTALLNFYAKCGDAQSARMVF 489
+T V V++AC+ G + G +H S + V T +++ CG + A +
Sbjct: 304 ITFVGVLAACSHGGLLNEG-KMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362
Query: 490 DAMR-EKNTVTWSAMIGGYGMQGD-GGGSLALFSDMLNEEVQPNEVIFTTILS 540
MR E + W A++ + G+ G LAL + E++P++ ILS
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLV---ELEPDDGGNYVILS 412
>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
Length = 1229
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 278/492 (56%), Gaps = 16/492 (3%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ YA +D+ S+R+VFDE ++NV+ MI YV N EG+ +F M V +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T ++ AC+ + G+ +HG K+G+ + L+ MY KCG + +AR V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ D+VSW +++VGY Q+ D AL++ + + + T+AS+L A + N+
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
V + ++G + N ++ +Y K + +A ++ D
Sbjct: 260 -MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA--------------DG 304
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
PDAV++ SV+ AC A+ +G +H Y ++ L+ N+ + AL++ YAKCG + A
Sbjct: 305 FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKA 363
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R VF+ M+ ++ V+W+AMI YG G G ++ALFS + + + P+ + F T L+ACSH
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G++ EG CF M +K P ++H CMVDLL RAG+++EA F+++M +EP+ ++GA
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++S D+G + K+ +L P+++ YYVL+SN+YA GRW V +R +MK +GL
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 666 SKSPGCSLVDLD 677
K+PG S V+++
Sbjct: 544 KKNPGASNVEVN 555
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 213/473 (45%), Gaps = 60/473 (12%)
Query: 64 SLKAFHALLIVDGLTNDKCNT----KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
+L+ H+ +I++ L +CN+ KL+ Y S V AR VFD +P + VMIR
Sbjct: 57 TLRTVHSRIILEDL---RCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD 179
Y N Y + V+ + M D++ F VLKAC I G K+H KVG
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 180 S-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
+ FV GLV MY KC + +R V DE ++VVSW S++ GY QN + L + M
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ + T+ SL+ A + + V + DM+ K G
Sbjct: 234 SVKISHDAGTMASLLPAVSN--------------------TTTENVMYVKDMFFKMGK-- 271
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
LVSW MI Y ++ P +A++L++ + F P+ V+I SVL A
Sbjct: 272 -----------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 359 QLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
L++G+ +H R L + + NAL+DMYAKC + AR +FE +DV++W +
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 418 IISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+IS D + PD++ V+ ++AC+ G ++ G S T
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHY 440
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
++ + +++ + G + A R + D E N W A++G + D
Sbjct: 441 KITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
L +C+ S+K H + L NT + +V Y + +F M S+
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAVSNT-------TTENVMYVKDMFFKMGKKSLVSWN 278
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
VMI Y N + + VE Y M E D + VL AC + + G K+H I +
Sbjct: 279 VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 338
Query: 176 G-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
P+ + L+DMYAKC + +R VF+ ++VVSWT+MI+ Y + + + LF
Sbjct: 339 KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 398
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+++++ + + I + + AC+ L +G+
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 585
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/451 (37%), Positives = 254/451 (56%), Gaps = 20/451 (4%)
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
NQ T S+++A A + G+ LH I K G + N + TAL+DMY KC ++ A VF
Sbjct: 9 NQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVF 68
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNL 363
D++ +LVSW +MIVG+ + D+A+ +F D + PN V+++SVLSA A +G L
Sbjct: 69 DQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGL 128
Query: 364 NMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
N GR VH + ++ GL T V+N+L+DMY KC + +F+ ++DV+ WN ++ G
Sbjct: 129 NFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGF 188
Query: 423 DDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
N + PD + +V+ + ASL A+ G+++H K G + +
Sbjct: 189 VQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNM 248
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+G+ L+ YAKCG A VF+ + + N ++W+AMI Y + G + LF ML+
Sbjct: 249 CILGS-LITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLS 307
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
E ++P+ V F +LSACSHTG V EG F SM + P +HY CMVDLL RAG L+
Sbjct: 308 EGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLD 367
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
EA F+E+MP++P S++GA L C Y +G +++ E+ P YVL++N+
Sbjct: 368 EAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCT 427
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
GR N+VR LM G+ K PGCS +D+
Sbjct: 428 RSGRLEEANEVRRLMGVNGVRKEPGCSWIDV 458
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 185/365 (50%), Gaps = 16/365 (4%)
Query: 66 KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H+L+ G N T LV MY + A VFD MP + S+ MI +F N
Sbjct: 30 QQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHN 89
Query: 125 DLYKDIVEFYK-CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+LY V +K +R++ + S VL AC + ++ G +VH +VK G P ++V
Sbjct: 90 NLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYV 149
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ L+DMY KCR ++F D++VV+W ++ G+VQND +E F MR +
Sbjct: 150 MNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGI 209
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
++ + +++ + A L ALHQG +H I+K+G N ++ +L+ MY KCG++ DA
Sbjct: 210 LPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQ 269
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VF+ + +++SWTAMI Y G ++ ++LF P+HVT VLSA + G
Sbjct: 270 VFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGR 329
Query: 363 LNMG-------RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA- 414
+ G + +H + G E Y +VD+ + + +A+ E+ K +
Sbjct: 330 VEEGLAHFNSMKKIHDMNP--GPEHYA---CMVDLLGRAGWLDEAKRFIESMPMKPTPSV 384
Query: 415 WNSII 419
W +++
Sbjct: 385 WGALL 389
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 150/308 (48%), Gaps = 26/308 (8%)
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
+PN T +S+LSASA + G+ +HSL + G + + V ALVDMYAKC + A
Sbjct: 7 YPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVR 66
Query: 403 IFETTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLG 444
+F+ E+++++WNS+I G N V P+ V++ SV+SACA++G
Sbjct: 67 VFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMG 126
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+ G +H K GL+ YV +L++ Y KC +F + +++ VTW+ ++
Sbjct: 127 GLNFGRQVHGVVVKFGLVPL-TYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLV 185
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G+ + F M E + P+E F+T+L + + + +G + +
Sbjct: 186 MGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQG-TAIHDQIIKLGY 244
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS---LFGAF-LHGCGLYSRFDLGE 620
V +M ++ + A+ G L +A + E + +S + A+ LHGC +L E
Sbjct: 245 VKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCA-NQVIELFE 303
Query: 621 VMIKKMLE 628
M+ + +E
Sbjct: 304 HMLSEGIE 311
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 168/452 (37%), Positives = 267/452 (59%), Gaps = 19/452 (4%)
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+Q T + +C+++ AL G+ + Y +K G+ + ++++L+ MY CG++ AR V
Sbjct: 118 ADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLV 177
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
FD +V W A++ Y ++G + +++F + VT+ SV++A ++G+
Sbjct: 178 FDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDA 237
Query: 364 NMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+G+ V GL + ++ AL+DMYAKC I AR +F+ +DV+AW+++ISG
Sbjct: 238 KLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGY 297
Query: 423 DD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
V P+ VT+VSV+SACA LGA++ G +H+Y ++ LS
Sbjct: 298 TQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSY-VRRKRLSLT 356
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+GTAL++FYAKCG A F++M KN+ TW+A+I G G G +L LFS M
Sbjct: 357 TILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRE 416
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
++P +V F +L ACSH+ +V EG + F SM RD+ P ++HY CMVDLL RAG ++
Sbjct: 417 AGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVD 476
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
EA +F+ MPIEP+ ++ A L C ++ +GE +K+++ L+P + YVL+SN+YA
Sbjct: 477 EAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYA 536
Query: 646 SDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
S G+W VR+ MK RG+ K+PGCSL++LD
Sbjct: 537 SAGQWKDAAMVRKEMKDRGIEKTPGCSLIELD 568
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 274/579 (47%), Gaps = 54/579 (9%)
Query: 31 TPTQHELDQTFASFHSLPS-IPCLNLLGLCKS---TGSLKAFHALLIVDGLTNDKCNTKL 86
TP + A + PS +P L+ L KS TGS K+FH+LL
Sbjct: 12 TPGRAGPAPPRAPLRADPSYLPQLHA-ALIKSGELTGSAKSFHSLL-------------- 56
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYS--FQVMIRWYFLNDLYKDIVEFYKCMRKRLK-- 142
+ S + YA S+F P P + + V++R + +D + + M
Sbjct: 57 EAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASAC 116
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D + LK+C + +D G V VK G D FVL+ L+ MYA C D+ ++R
Sbjct: 117 PADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARL 176
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFD + VV W +++A Y++N E + +F M E V +++TL S+VTAC ++
Sbjct: 177 VFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGD 236
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
GKW+ G++ + G+ N LVTAL+DMY KCG I AR +FD + S D+V+W+AMI G
Sbjct: 237 AKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISG 296
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
YTQ+ +AL LF++ + A PN VT+ SVLSA A LG L G+ VHS R L
Sbjct: 297 YTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLT 356
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISAC 440
T++ ALVD YAKC I DA FE+ K+ W ++I G+ N
Sbjct: 357 TILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATN--------------- 401
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
G + L + + G+ ++V L+ C + R FD+M +
Sbjct: 402 ---GRGREALELFSSMREAGIEPTDVTFIGVLMACSHSC-LVEEGRRHFDSMARDYGI-- 455
Query: 501 SAMIGGYGMQGDGGGSLALFSD----MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
+ YG D G L + + ++PN VI+ +LS+C+ VG G +
Sbjct: 456 KPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALK 515
Query: 557 SMCRDFKFVPSMK-HYVCMVDLLARAGRLEEALEFMENM 594
+ PS YV + ++ A AG+ ++A + M
Sbjct: 516 QI---ISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEM 551
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 287/515 (55%), Gaps = 20/515 (3%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
F++ ++ D+ + + F E + +++ W ++I GY Q + + ++ M+
Sbjct: 35 FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 94
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V N T ++ AC GK +HG K G N + +L+ MY K G I A
Sbjct: 95 QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 154
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
R VFD+L +VSWT++I GY Q+G P +AL +F + + + P+ + + SV++A +
Sbjct: 155 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 214
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+L G+ +H L +LGLE + ++ +L MYAK ++ AR+ F + ++I WN++I
Sbjct: 215 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMI 274
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
SG + N+ D++T+ S + A A +G++++ L Y +K
Sbjct: 275 SGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEY- 333
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ +V T L++ YAKCG AR VFD + +K+ V WS MI GYG+ G G ++ L+++
Sbjct: 334 RDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNE 393
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M V PN+ F +L+AC ++G+V EGW+ F+ M D P +HY C+VDLL RAG
Sbjct: 394 MKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAG 452
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
L +A +F+ +MPI+P VS++GA L C ++ + LGE+ +++ L P +YV +SN
Sbjct: 453 YLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSN 512
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
LYAS W RV VR +M Q+GL+K G S ++++
Sbjct: 513 LYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEIN 547
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 147/463 (31%), Positives = 229/463 (49%), Gaps = 26/463 (5%)
Query: 65 LKAFHALLIVDGLTNDKCN---TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
L + LIV GL KC K ++ FG V YA F + PD + +I+ Y
Sbjct: 18 LDQVYVQLIVSGL--HKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 75
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
++ + Y M+ + F F VLKAC G ++H + K G G +
Sbjct: 76 TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 135
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
FV LV MYAK I +R VFD+ D+ VVSWTS+I+GYVQN E L +F MR+
Sbjct: 136 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC 195
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V+ + I L S++TA + L QGK +HG + K+G+E +V +L MY K G + A
Sbjct: 196 NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA 255
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
R F+ + +L+ W AMI GY +GY ++A+KLF + + + +T+ S + ASAQ+
Sbjct: 256 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 315
Query: 361 GNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
G+L + R + + D T +N L+DMYAKC I AR +F+ ++KDV+ W+ +I
Sbjct: 316 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 375
Query: 420 SGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
G V P+ T + +++AC + G V+ G L G+
Sbjct: 376 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIE 435
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMI 504
+ + + +++ + G A +M K V+ W A++
Sbjct: 436 PHHQHY-SCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALL 477
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 188/403 (46%), Gaps = 18/403 (4%)
Query: 31 TPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSL------KAFHALLIVDGL-TNDKCN 83
P + +D + H P+ C L + K+ G K H G +N
Sbjct: 83 APIRMYMDMQISQVH--PN--CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 138
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
LVSMY FG + YAR VFD + + S+ +I Y N + + +K MR+ +
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 198
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSR 200
D V+ A + D+ +G +H + K+G PD ++ L MYAK + +R
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPD--IVISLTTMYAKRGLVEVAR 256
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
F+ N++ W +MI+GY N +E + LF M + + IT+ S V A A++
Sbjct: 257 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 316
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+L +WL GYI K ++ + T L+DMY KCG+I AR VFD + D+V W+ MI+
Sbjct: 317 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 376
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
GY G+ +A+ L+ + K A PN T +L+A G + G + L G+E
Sbjct: 377 GYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEP 436
Query: 380 DYTVINALVDMYAKCHVIADAR-YIFETTSEKDVIAWNSIISG 421
+ + +VD+ + + A +I + V W +++S
Sbjct: 437 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 479
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 180/499 (36%), Positives = 276/499 (55%), Gaps = 23/499 (4%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDC--AQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+R+VFD T ++ W +++ + + A + L L+ RMR V + T ++ AC
Sbjct: 71 ARRVFDATPVRDAYMWNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPAC 130
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL--CSIDLVS 314
A R L G+ +HG +++ + + + +AL+ MY + G + DA VF E S +VS
Sbjct: 131 AAARELWLGRAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVS 190
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
WT+M+ GY Q+ Y +A+ LF PN +T+ S L L+ G MVH I
Sbjct: 191 WTSMVAGYVQNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVI 250
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------ 421
RLG + + + NAL+ MY KC I A+ +FE + + +WN++++
Sbjct: 251 RLGFDANIPLANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIK 310
Query: 422 -----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
L + V D VTLVSV+SACA GA+Q G +H + GL ++ +G L++ Y
Sbjct: 311 FFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHELARNHGL-DTDARIGNVLVDMY 369
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG+ SAR VFD +R ++ V+WSAMI Y G +L LFS M NE V+PN FT
Sbjct: 370 AKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFT 429
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L AC H+G+V EG K F S+ D++ P+++HY CMVD+L RAGRL EA E + M +
Sbjct: 430 AVLVACGHSGLVEEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSL 489
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
PD ++GAFL GC L+ +L E + + + + + +YVL+SN+Y G ++
Sbjct: 490 CPDKCVWGAFLAGCKLHGNLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAGMLKDAERM 549
Query: 657 RELMKQRGLSKSPGCSLVD 675
R MK+ L+K+ G S ++
Sbjct: 550 RWAMKEMELNKTAGRSAIN 568
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 211/413 (51%), Gaps = 25/413 (6%)
Query: 61 STGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
S +L HA IV G++ N T L++ + YAR VFD+ P D Y + ++R
Sbjct: 33 SLRALLPIHARAIVLGVSANPAFATSLLAGVAP-ASLAYARRVFDATPVRDAYMWNTLLR 91
Query: 120 WYFLNDL--YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
+ + L D + YK MR D++ + VL AC R++ G VH ++V+
Sbjct: 92 AHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGDVVRFAL 151
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDET--LDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
D FV + L+ MY + ++ + VF E+ + VVSWTSM+AGYVQN E + LF
Sbjct: 152 AGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFGEAVALF 211
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
M V N+ITL S + L G+ +HG+++++G + N L AL+ MY KC
Sbjct: 212 GTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDANIPLANALIAMYGKC 271
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G+I A+++F+ + + L SW M+ Y Q +A+K F + VT+ SVL
Sbjct: 272 GSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRMLTEKVGFDCVTLVSVL 331
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
SA A+ G L G+ VH L GL+ D + N LVDMYAKC IA AR +F+ + V+
Sbjct: 332 SACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRMRSVV 391
Query: 414 AWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVG 449
+W+++IS ++ V P++ T +V+ AC G V+ G
Sbjct: 392 SWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLVEEG 444
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 168/367 (45%), Gaps = 15/367 (4%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSM--PNPDFYSFQVMIRWYF 122
+A H ++ L D ++ L++MY G V A VF + S+ M+ Y
Sbjct: 140 RAVHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYV 199
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV 182
N + + V + M + L +D G VH ++++G +
Sbjct: 200 QNYYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDANIP 259
Query: 183 LT-GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
L L+ MY KC I ++ +F+ +++ SW +M+A Y Q+ E + F RM
Sbjct: 260 LANALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRMLTEK 319
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V + +TL S+++ACA+ AL GKW+H G++ ++ + L+DMY KCG I AR
Sbjct: 320 VGFDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASAR 379
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+VFD L +VSW+AMI Y G ++ALKLF+ K PN T +VL A G
Sbjct: 380 NVFDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSG 439
Query: 362 NLNMGRMVHSLGIRLGLEDYTVINAL------VDMYAKCHVIADARYIFETTSE-KDVIA 414
+ G + H I L DY + L VDM + + +A I S D
Sbjct: 440 LVEEG-LKHFNSI---LSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCV 495
Query: 415 WNSIISG 421
W + ++G
Sbjct: 496 WGAFLAG 502
>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
Length = 806
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 194/636 (30%), Positives = 328/636 (51%), Gaps = 31/636 (4%)
Query: 57 GLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQV 116
G K ++ H + N + LV+MY G + A + FD +
Sbjct: 162 GRIKDLAQGRSIHYRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNA 221
Query: 117 MIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI-VK 174
++ ++ +E F++ + + + + A LR G+++H +I +
Sbjct: 222 IMSALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRG---GIQIHDKIQSE 278
Query: 175 VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
+ G VL L+ MY +C + + +VF + +NVVSWTSMIA Q+ + LF
Sbjct: 279 IHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLF 338
Query: 235 NRMREGFVEGNQITLGSLVTACAKL---RALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
+ M + N+ T S+V+A A L L +G+ +H I GI+ + + +L++MY
Sbjct: 339 DGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMY 398
Query: 292 VKCGNIRDARSVFDELC--SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+ G + +AR VFD + S +VS+T MI Y +G+P +AL++F + PN +T
Sbjct: 399 ARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEIT 458
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE--DYTVINALVDMYAKCHVIADARYIFETT 407
A+VL+A +G+L G +H I GL+ D N+LVDMYAKC + A +FET
Sbjct: 459 FATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM 518
Query: 408 SEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGS 450
KD++AW +II+ L + PD TL +++ ACA+LG + +G
Sbjct: 519 KTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGE 578
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H + + L + + AL YAKCG + A ++ R + TW++M+ + Q
Sbjct: 579 KIHRQALRSKL-EQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQ 637
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G +L L+++M +E V+PNEV F +L +CS G+V EG + F+S+ D+ PS +H
Sbjct: 638 GLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEH 697
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
+ CMVD+L RAG+L +A E +++MP PD + + L C L++ ++G + +LEL
Sbjct: 698 FGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELD 757
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQV-RELMKQRGL 665
P+ +V +S +YA+ GR ++++ REL +R +
Sbjct: 758 PESTSQFVALSQIYAAAGRNSDIDEIKRELALRRQI 793
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 159/564 (28%), Positives = 276/564 (48%), Gaps = 36/564 (6%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLV-SMYGSFGHVKYARSVFDSMPNP 109
NLL C + +L + HA ++ L + +LV MY A ++FD+MP+
Sbjct: 55 NLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDR 114
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ + V+++ + D +D +E Y+ M + F + AC ++D+ +G +H
Sbjct: 115 RPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH 174
Query: 170 CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+ G +S + + LV MYA+C I + FD+ + W ++++ +
Sbjct: 175 YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRR 234
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV---TA 286
+ LF +M + + + + + ACA L G +H KI EI+ V A
Sbjct: 235 AIELFFQMEQH--QCSDRSCAIALGACAAAGHLRGGIQIHD---KIQSEIHGTRVLVLNA 289
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ MYV+CG + +A VF ++ ++VSWT+MI QSG+ A+KLF PN
Sbjct: 290 LISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPN 349
Query: 347 HVTIASVLSASAQLGN---LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
T ASV+SA A LG L+ GR +HS G++ D V N+L++MYA+ ++A+AR
Sbjct: 350 EKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEARE 409
Query: 403 IFETTSE--KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASL 443
+F++ E K V+++ ++I+ N V+P+ +T +V++AC ++
Sbjct: 410 VFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAI 469
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G + G+ +H + GL SS+ + +L++ YAKCGD A VF+ M+ K+ V W+ +
Sbjct: 470 GDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTI 529
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I G+ +L L+ ML + P+ +T+L AC++ G + G K R K
Sbjct: 530 IAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRS-K 588
Query: 564 FVPSMKHYVCMVDLLARAGRLEEA 587
+ + A+ G LE+A
Sbjct: 589 LEQDAHFQNALAAMYAKCGSLEKA 612
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/521 (26%), Positives = 242/521 (46%), Gaps = 33/521 (6%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLV-DMYAKCRDIGSSRQVFDE 205
+++ +L+ C R +D G +VH IV + +L LV MYA+CR ++ +FD
Sbjct: 51 LLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDA 110
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
D+ W ++ ++ D ++ L L+ RM + + + AC +++ L QG
Sbjct: 111 MPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQG 170
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ +H Y + G INS + +AL+ MY +CG I A + FD+ + W A++ +
Sbjct: 171 RSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGA 229
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH-SLGIRLGLEDYTVI 384
G+ +A++LF + + + A L A A G+L G +H + + V+
Sbjct: 230 GHHRRAIELFFQMEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVL 287
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVS 427
NAL+ MY +C + +A +F ++V++W S+I+ + + ++
Sbjct: 288 NALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGIN 347
Query: 428 PDAVTLVSVISACASLGAVQV---GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
P+ T SV+SA A LG + G +H+ T G + ++ V +L+N YA+ G
Sbjct: 348 PNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASG-IDADPIVQNSLINMYARSGLLAE 406
Query: 485 ARMVFDAMRE--KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
AR VFD++ E K V+++ MI Y G +L +F +M V PNE+ F T+L+AC
Sbjct: 407 AREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAAC 466
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV-- 600
G + G M Y +VD+ A+ G L A E M + V
Sbjct: 467 VAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAW 526
Query: 601 -SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
++ A + + DL + M++ +HPD A L+
Sbjct: 527 TTIIAANVQSGNNRAALDLYDRMLQS--GIHPDIATLSTLL 565
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 173/515 (33%), Positives = 287/515 (55%), Gaps = 20/515 (3%)
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
F++ ++ D+ + + F E + +++ W ++I GY Q + + ++ M+
Sbjct: 20 FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 79
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V N T ++ AC GK +HG K G N + +L+ MY K G I A
Sbjct: 80 QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 139
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
R VFD+L +VSWT++I GY Q+G P +AL +F + + + P+ + + SV++A +
Sbjct: 140 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 199
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+L G+ +H L +LGLE + ++ +L MYAK ++ AR+ F + ++I WN++I
Sbjct: 200 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMI 259
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
SG + N+ D++T+ S + A A +G++++ L Y +K
Sbjct: 260 SGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEY- 318
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ +V T L++ YAKCG AR VFD + +K+ V WS MI GYG+ G G ++ L+++
Sbjct: 319 RDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNE 378
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M V PN+ F +L+AC ++G+V EGW+ F+ M D P +HY C+VDLL RAG
Sbjct: 379 MKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM-PDHGIEPHHQHYSCVVDLLGRAG 437
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
L +A +F+ +MPI+P VS++GA L C ++ + LGE+ +++ L P +YV +SN
Sbjct: 438 YLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSN 497
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
LYAS W RV VR +M Q+GL+K G S ++++
Sbjct: 498 LYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEIN 532
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 211/419 (50%), Gaps = 24/419 (5%)
Query: 65 LKAFHALLIVDGLTNDKCN---TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
L + LIV GL KC K ++ FG V YA F + PD + +I+ Y
Sbjct: 3 LDQVYVQLIVSGL--HKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGY 60
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
++ + Y M+ + F F VLKAC G ++H + K G G +
Sbjct: 61 TQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNV 120
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
FV LV MYAK I +R VFD+ D+ VVSWTS+I+GYVQN E L +F MR+
Sbjct: 121 FVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQC 180
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V+ + I L S++TA + L QGK +HG + K+G+E +V +L MY K G + A
Sbjct: 181 NVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVA 240
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
R F+ + +L+ W AMI GY +GY ++A+KLF + + + +T+ S + ASAQ+
Sbjct: 241 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 300
Query: 361 GNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
G+L + R + + D T +N L+DMYAKC I AR +F+ ++KDV+ W+ +I
Sbjct: 301 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 360
Query: 420 SGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
G V P+ T + +++AC + G V+ G L G+
Sbjct: 361 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGI 419
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 188/403 (46%), Gaps = 18/403 (4%)
Query: 31 TPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSL------KAFHALLIVDGL-TNDKCN 83
P + +D + H P+ C L + K+ G K H G +N
Sbjct: 68 APIRMYMDMQISQVH--PN--CFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 123
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
LVSMY FG + YAR VFD + + S+ +I Y N + + +K MR+ +
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 183
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSR 200
D V+ A + D+ +G +H + K+G PD ++ L MYAK + +R
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPD--IVISLTTMYAKRGLVEVAR 241
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
F+ N++ W +MI+GY N +E + LF M + + IT+ S V A A++
Sbjct: 242 FFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVG 301
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+L +WL GYI K ++ + T L+DMY KCG+I AR VFD + D+V W+ MI+
Sbjct: 302 SLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIM 361
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
GY G+ +A+ L+ + K A PN T +L+A G + G + L G+E
Sbjct: 362 GYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEP 421
Query: 380 DYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISG 421
+ + +VD+ + + A +I + V W +++S
Sbjct: 422 HHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSA 464
>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Cucumis sativus]
Length = 816
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 188/611 (30%), Positives = 314/611 (51%), Gaps = 21/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S + FG + AR +FD M S+ ++I Y ++ K+ Y MR+ E D
Sbjct: 80 MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD 204
+L EL + +++H ++K+G + V LVD Y K + + Q+F
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
L+K+ V++ S++ GY +E + LF + ++ + T +L++A L
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HG++LK N + ALLD Y K + + +F E+ +D +S+ +I Y
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAW 319
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G ++ LF ++ F A++LS + NL MGR +H I +G + V
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNV 426
NALVDMYAKC+ +A+ IF+ + K + W ++IS G++ V
Sbjct: 380 ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGV 439
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D T S++ ACA+L ++ +G LH+ + G +S NVY G+ALL+ YAKCG A
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMS-NVYSGSALLDTYAKCGCMTDAI 498
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F M E+N+V+W+A+I Y G+ G+L F M+ +P+ V F ++LSACSH G
Sbjct: 499 KSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCG 558
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
V E F SM + ++ P +HY MVD+L R GR +EA + M MP EP ++ +
Sbjct: 559 FVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSV 618
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L+ C ++ +L + ++ + + A Y+ +SN+YA G+W V +V++ M+ RG+
Sbjct: 619 LNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGV 678
Query: 666 SKSPGCSLVDL 676
K P S V++
Sbjct: 679 RKVPAYSWVEI 689
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 233/464 (50%), Gaps = 30/464 (6%)
Query: 162 IDEGMKVHCEIV--KVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
++ G VH V ++ ++ L ++ + K + +R++FD +++ VSWT +I
Sbjct: 54 LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GY+Q++ ++E L+ MR G +E + +TL +L++ +L + +H +++K+G E
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
N + +L+D Y K + A +F + + D V++ +++ GY+ G ++A++LF +
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIA 398
+ P+ T A++LSA+ L + G+ VH ++ + + V NAL+D Y+K +
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293
Query: 399 DARYIFETTSEKDVIAWNSIISG---------------------LDDNVSPDAVTLVSVI 437
+ +F E D I++N +I+ D P A TL+S+
Sbjct: 294 EVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFA-TLLSIA 352
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
++ +L ++G +H + G + V AL++ YAKC + A+ +FD + K+T
Sbjct: 353 TSSLNL---RMGRQIHCQAITVG-ANFESRVENALVDMYAKCNGDKEAQKIFDNIACKST 408
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V W+AMI Y +G + +FSDM V ++ F +IL AC++ + G + +S
Sbjct: 409 VPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLG-RQLHS 467
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
+ F+ ++ ++D A+ G + +A++ MP VS
Sbjct: 468 LLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVS 511
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 73/200 (36%), Gaps = 58/200 (29%)
Query: 473 LNFYAKCGDAQSARMVFDAMREKNT-------------------------------VTWS 501
+N + + GD A VFD M KNT V+W+
Sbjct: 50 VNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWT 109
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGE 550
+IGGY + L++DM ++P+ V T+LS HT ++
Sbjct: 110 ILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKL 169
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G++ +C +VD + L A + ++M + D F + + G
Sbjct: 170 GYEYNLMVCNS------------LVDAYCKTHCLYLASQLFKHM-LNKDTVTFNSLMTG- 215
Query: 611 GLYSRFDLGEVMIKKMLELH 630
YS L E I+ LELH
Sbjct: 216 --YSNEGLNEEAIELFLELH 233
>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 840
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 195/614 (31%), Positives = 307/614 (50%), Gaps = 62/614 (10%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S Y + G++ AR +F+ P + ++ ++ Y N + + + M ++
Sbjct: 74 MISAYANLGNLVEARKLFNETPIXNSITWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPS 133
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ VL+AC L + G +HC +K+ + FV TGLVDMY+KC+ + + +F
Sbjct: 134 QYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEYLFF 193
Query: 205 ETLD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D KN V WT+M+ GY QN + + + F MR +E N T S++TAC + A
Sbjct: 194 SLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYA 253
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +HG I+ G N ++ +AL+DMY KCG++ AR + D + D+V W +MIVG
Sbjct: 254 FGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCV 313
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YT 382
GY ++AL LF D + T SVL + A NL +G VHSL I+ G + T
Sbjct: 314 THGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKT 373
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NALVDMYAK ++ A +F +KDVI+W S+++G N
Sbjct: 374 VSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTAR 433
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHA---YSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V D + V SACA L ++ G +HA S+ LLS+ +L+ YAKCG
Sbjct: 434 VDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAE----NSLITMYAKCGCL 489
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ A V D+M +N ++W+A+I GY
Sbjct: 490 EDAIRVXDSMETRNVISWTAIIVGY----------------------------------- 514
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+ G+V G F SM + + P+ Y CM+DLL RAG++ EA + M +EPD ++
Sbjct: 515 AQNGLVETGQSYFESMEKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATI 574
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ + L C ++ +LGE K +++L P + YVL+SN+++ GRW +R MK
Sbjct: 575 WKSLLSACRVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKT 634
Query: 663 RGLSKSPGCSLVDL 676
G+ + PG S +++
Sbjct: 635 MGIXQEPGYSWIEM 648
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 172/592 (29%), Positives = 274/592 (46%), Gaps = 77/592 (13%)
Query: 21 LRFFS--YTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLT 78
LR FS +++ Q P+Q+ L L + L+LL TG + +A+ I
Sbjct: 119 LRQFSQMWSDGQKPSQYTLGSV------LRACSTLSLL----HTGKMIHCYAIKI-QLEA 167
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
N T LV MY + A +F S+P+ ++ + M+ Y N ++ +K M
Sbjct: 168 NIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEM 227
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
R + E ++F F +L AC + G +VH I+ G GP+ +V + LVDMYAKC D+
Sbjct: 228 RNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDL 287
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
S+R + D +VV W SMI G V + +E LVLF++M + + T S++ +
Sbjct: 288 ASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSL 347
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A + L G+ +H +K G + + AL+DMY K GN+ A VF+++ D++SWT
Sbjct: 348 ASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWT 407
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+++ GY +G+ +KAL+LF D + A + +A V SA A+L + GR VH+ I+
Sbjct: 408 SLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKS 467
Query: 377 GLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVS 435
+ N+L+ MYAKC + DA + ++ ++VI+W +II G N
Sbjct: 468 SAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQN---------- 517
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
G V+ G S K VY + YA
Sbjct: 518 --------GLVETGQSYFESMEK-------VYGIKPASDRYA------------------ 544
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
MI G G + L + M +V+P+ I+ ++LSAC G + G +
Sbjct: 545 ------CMIDLLGRAGKINEAEHLLNRM---DVEPDATIWKSLLSACRVHGNLELGERAG 595
Query: 556 YSMCRDFKFVPSMK-HYVCMVDLLARAGRLEEALEF---MENMPI--EPDVS 601
++ K PS YV + ++ + AGR E+A M+ M I EP S
Sbjct: 596 KNL---IKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYS 644
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 172/521 (33%), Positives = 286/521 (54%), Gaps = 26/521 (4%)
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQ---VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
GP + T L+ Y D G +R+ +F+E +++VV+WT+MI G+ + + +
Sbjct: 41 GPSVWA-TNLIKSYF---DKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTM 96
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV- 292
F+ M V+ N T+ S++ AC ++AL G H K GI+ + ++ ALLDMY
Sbjct: 97 FSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAA 156
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
C + DA SVF+++ VSWT +I G+T G L F D PN + +
Sbjct: 157 SCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSI 216
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
A A + + + G+ +H+ + GL D V+N+++DMY +C+ + DA+ F +EK+
Sbjct: 217 AARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKN 276
Query: 412 VIAWNSIISGLD----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+I WN++I+G + + P+ T S+ +ACA+L + G +H
Sbjct: 277 LITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGG 336
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
++G NV + +L++ YAKCG + +F M ++ V+W+ M+ GYG G G
Sbjct: 337 IVRRGF-DKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKE 395
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
++ LF +M+ +QP+ ++F +L CSH G+V +G K F SM D+ P + Y C+V
Sbjct: 396 AVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVV 455
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DLL RAGR+EEA + +ENMP EPD S++GA L C Y +LG + +++L+ P+ A
Sbjct: 456 DLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAG 515
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+L+S +YA++G+W ++R+LMK K G S +++
Sbjct: 516 TYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEI 556
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 16/344 (4%)
Query: 86 LVSMYG-SFGHVKYARSVFDSMPNPDFYSFQVMIRWY-FLNDLYKDIVEFYKCMRKRLKE 143
L+ MY S + A SVF+ +P S+ +I + D Y ++ F + + + +
Sbjct: 150 LLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGP 209
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
++F FS +AC + G ++H + K G D+ V+ ++DMY +C + +++
Sbjct: 210 -NSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRC 268
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F E +KN+++W ++IAGY ++D + E L LF +M + N T S+ ACA L L
Sbjct: 269 FGELTEKNLITWNTLIAGYERSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVL 327
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +HG I++ G + N L+ +L+DMY KCG+I D+ +F ++ DLVSWT M++GY
Sbjct: 328 SCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGY 387
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
GY +A+KLF + + P+ + VL + G ++ G R LEDY
Sbjct: 388 GAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKY----FRSMLEDYN 443
Query: 383 ------VINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSII 419
+ +VD+ + + +A + E E D W +++
Sbjct: 444 INPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALL 487
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 116/245 (47%), Gaps = 4/245 (1%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA + GL D ++ MY ++ A+ F + + ++ +I Y +
Sbjct: 231 KQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERS 290
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL- 183
D + + F++ M + + F F+ + AC L + G +VH IV+ G + L
Sbjct: 291 DSSESLSLFFQ-MGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALI 349
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+DMYAKC I S ++F + +++VSWT+M+ GY + +E + LF+ M + ++
Sbjct: 350 NSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQ 409
Query: 244 GNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
++I ++ C+ + +G K+ + I + + ++D+ + G + +A
Sbjct: 410 PDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQ 469
Query: 303 VFDEL 307
+ + +
Sbjct: 470 LVENM 474
>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
Length = 860
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 201/627 (32%), Positives = 317/627 (50%), Gaps = 37/627 (5%)
Query: 55 LLGLCKSTGSLKA---FHALL---IVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
+L C + G L+ HAL+ GL +D ++S++ G + R +FD MP
Sbjct: 238 VLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 297
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ ++ MI Y + +E Y CM E D+ S VL+AC L+++++G
Sbjct: 298 HRTVVTWTTMIAAYNQRGYSMEALELYHCMDI---EPDDIALSNVLQACSRLKNLEQGRA 354
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
VH I P V T LVDMY KC D+ +R+ FD ++V+SWTS+I Y +
Sbjct: 355 VHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENF 414
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+E L +F+ M VE N IT +++ AC++L +L G+ LH ++ G + + A
Sbjct: 415 GREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNA 474
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ MY K G + AR VFD + SW M+V TQ+G+ +AL++++ F P
Sbjct: 475 LVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPG 534
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIF 404
++ L + L +++ R +H + I+ D + N L+++YAKC + AR +F
Sbjct: 535 SPIFSAALVSCTALEDVSRARAIHGV-IKSSDFYPDLVLSNVLMNVYAKCGELEKARLVF 593
Query: 405 ETTSEKDVIAWNSIISGLDDN--------------VSPDAVTLVSVISACASLGAVQVGS 450
+ +EK+ ++W ++I G N V P+ + V VIS+CA LGA+ G
Sbjct: 594 DQMTEKNEVSWTTMIGGYAQNGRPAEALELYKAMDVQPNFIAFVPVISSCADLGALVEGQ 653
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+HA + GL ++ V V TAL+N YAKCG AR FD+ + W++M Y
Sbjct: 654 RVHARLSDAGLQNNEVIV-TALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQF 712
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G L L+ +M + VQPN + ++L ACSH GM+ E F M D P+ +H
Sbjct: 713 GHGSQVLELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEH 772
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPD--------VSLFGAFLHGCGLYSRFDLGEVM 622
Y CM DLL R+GRLEEA + ++ E VS + +FL C ++ +
Sbjct: 773 YSCMTDLLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGA 832
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGR 649
+K+ EL P+ + YVL+S Y+ +
Sbjct: 833 AEKLYELDPEDSAPYVLLSQTYSPQAK 859
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/604 (28%), Positives = 288/604 (47%), Gaps = 62/604 (10%)
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-V 175
MI Y +++ +E Y+ M +R + ++ F+ VL AC L+D++ G KVH I + V
Sbjct: 1 MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60
Query: 176 GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
D+ + L+++YAKC D+ SR++F+ + V +W +MI YVQ+D QE L F
Sbjct: 61 ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH--LVTALLDMYVK 293
RM + IT S++ AC L GK +H I +I + L +L+ MY K
Sbjct: 121 RMD---APPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGK 177
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIAS 352
CG++ DA VF + + SWTAMI Y Q+GY +A+++F D P+ +T A
Sbjct: 178 CGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAG 237
Query: 353 VLSASAQLGNLNMGRMVHSLGIR---LGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
VL+A + LG+L G +H+L R LGLE D + + ++ ++A+C + R +F+
Sbjct: 238 VLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMP 297
Query: 409 EKDVIAWNSIISGLDD--------------NVSPDAVTLVSVISACASLGAVQVGSSLHA 454
+ V+ W ++I+ + ++ PD + L +V+ AC+ L ++ G ++H+
Sbjct: 298 HRTVVTWTTMIAAYNQRGYSMEALELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVHS 357
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+ S + V T L++ Y KCGD AR FD + ++ ++W+++I Y + G
Sbjct: 358 RIASRDFEPS-LMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGR 416
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWKC--------- 554
+L +F M E V+PN + F T++ ACS H+ +V G
Sbjct: 417 EALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALV 476
Query: 555 ----------FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE---PDVS 601
F M D V + M+ L + G EALE + +E P
Sbjct: 477 SMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSP 536
Query: 602 LFGAFLHGCGLYSRFDLGEVM--IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
+F A L C + + K + +PD VL+ N+YA G + V +
Sbjct: 537 IFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLM-NVYAKCGELEKARLVFDQ 595
Query: 660 MKQR 663
M ++
Sbjct: 596 MTEK 599
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/521 (33%), Positives = 286/521 (54%), Gaps = 26/521 (4%)
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQ---VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
GP S T L+ Y D G +R+ +F+E +++VV+WT+MI G+ + + +
Sbjct: 41 GP-SVWATNLIKSYF---DKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTM 96
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV- 292
F+ M V+ N T+ S++ AC ++AL G H K GI+ + ++ ALLDMY
Sbjct: 97 FSEMLRSEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAA 156
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
C + DA SVF+++ VSWT +I G+T G L F D PN + +
Sbjct: 157 SCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSI 216
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
A A + + + G+ +H+ + GL D V+N+++DMY +C+ + DA+ F +EK+
Sbjct: 217 AARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKN 276
Query: 412 VIAWNSIISGLD----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+I WN++I+G + + P+ T S+ +ACA+L + G +H
Sbjct: 277 LITWNTLIAGYERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGG 336
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
++G NV + +L++ YAKCG + +F M ++ V+W+ M+ GYG G G
Sbjct: 337 IVRRGF-DKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKE 395
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
++ LF +M+ +QP+ ++F +L CSH G+V +G K F SM D+ P + Y C+V
Sbjct: 396 AVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVV 455
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DLL RAGR+EEA + +ENMP EPD S++GA L C Y +LG + +++L+ P+ A
Sbjct: 456 DLLGRAGRVEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAG 515
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+L+S +YA++G+W ++R+LMK K G S +++
Sbjct: 516 TYLLLSKIYAAEGKWGEFAKMRKLMKGMNKKKEVGKSWIEI 556
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 176/344 (51%), Gaps = 16/344 (4%)
Query: 86 LVSMYG-SFGHVKYARSVFDSMPNPDFYSFQVMIRWY-FLNDLYKDIVEFYKCMRKRLKE 143
L+ MY S + A SVF+ +P S+ +I + D Y ++ F + + + +
Sbjct: 150 LLDMYAASCATMDDALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGP 209
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
++F FS +AC + G ++H + K G D+ V+ ++DMY +C + +++
Sbjct: 210 -NSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRC 268
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F E +KN+++W ++IAGY ++D + E L LF +M + N T S+ ACA L L
Sbjct: 269 FGELTEKNLITWNTLIAGYERSD-SSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVL 327
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +HG I++ G + N L+ +L+DMY KCG+I D+ +F ++ DLVSWT M++GY
Sbjct: 328 SCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGY 387
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
GY +A+KLF + + P+ + VL + G ++ G R LEDY
Sbjct: 388 GAHGYGKEAVKLFDEMVQSGIQPDRIVFMGVLCGCSHAGLVDKGLKY----FRSMLEDYN 443
Query: 383 ------VINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSII 419
+ +VD+ + + +A + E E D W +++
Sbjct: 444 INPDQEIYRCVVDLLGRAGRVEEAFQLVENMPFEPDESVWGALL 487
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 116/245 (47%), Gaps = 4/245 (1%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA + GL D ++ MY ++ A+ F + + ++ +I Y +
Sbjct: 231 KQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERS 290
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL- 183
D + + F++ M + + F F+ + AC L + G +VH IV+ G + L
Sbjct: 291 DSSESLSLFFQ-MGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALI 349
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+DMYAKC I S ++F + +++VSWT+M+ GY + +E + LF+ M + ++
Sbjct: 350 NSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEMVQSGIQ 409
Query: 244 GNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
++I ++ C+ + +G K+ + I + + ++D+ + G + +A
Sbjct: 410 PDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQ 469
Query: 303 VFDEL 307
+ + +
Sbjct: 470 LVENM 474
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 299/549 (54%), Gaps = 22/549 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ + +K++ C + G++ H I+K+G + ++ + +VDMYAKC +I S+R +F
Sbjct: 68 NPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLF 127
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D+ + VV+W S+I GY+ +C + + LF +M + + + ++ S + C++L A
Sbjct: 128 DQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEARE 187
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G +HG ILK G+ N + T+L+DMY KCG++ D+R VFD + + ++++WT+M+ GY+
Sbjct: 188 VGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYS 247
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
Q PD+A+ L + D PN VT S+LS+ + L+ VH I+LGLE
Sbjct: 248 QIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVY 307
Query: 384 INA-LVDMYAKC-HVIADARYIFETTSEKDVIAWNSIISGLDD----------------- 424
I A LV +Y+KC + D + + D IAWN++I+G
Sbjct: 308 IAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQA 367
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ D+ TL SV+ A + ++ G ++HA + G + S++ V L++ YA+CG
Sbjct: 368 GIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYI-SHLNVQNGLVSMYARCGAIGD 426
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
++ VF M E + ++W+A++ + G G ++ LF M E++PN F +L ACSH
Sbjct: 427 SKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSH 486
Query: 545 TGMVGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
G V +G + F +M D P ++HY +VD RAG L EA F+ +MPI P S++
Sbjct: 487 VGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTFGRAGYLNEAEAFINSMPIVPAPSVY 546
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
A L ++ ++ KK+LEL P+ YVL+S++ DG W +R+LM R
Sbjct: 547 KALLSASLVHGNREIAARSAKKLLELWPNDPATYVLLSSVLTVDGNWDDAADLRKLMCDR 606
Query: 664 GLSKSPGCS 672
GL K PG S
Sbjct: 607 GLRKKPGYS 615
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 224/452 (49%), Gaps = 25/452 (5%)
Query: 23 FFSYTNQQTPTQHELDQTFASFHSLPSIPCLN-LLGLCKSTGS----LKAFHALLIVDGL 77
F S N +P +L F SL + LN ++ C +GS ++A +L + +
Sbjct: 42 FNSNQNTSSPVDSDLIAEFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFI 101
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
+N + +V MY G + AR +FD MP ++ +I Y + K +E + M
Sbjct: 102 SNVYICSAVVDMYAKCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKM 161
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
K F S L C +L + G +VH I+K G G + V T LVDMY+KC D+
Sbjct: 162 LKAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDV 221
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
SR VFD +++NV++WTSM+ GY Q + E + L M + N +T SL+++
Sbjct: 222 DDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSF 281
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC-GNIRDARSVFDELCSIDLVSW 315
+ L +H I+++G+E N ++ L+ +Y KC ++ D + V + + D ++W
Sbjct: 282 SGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKVCSVVMTCDNIAW 341
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
A+I GY++ G ++AL+ F + K A + T+ SV+ A L G+ +H+L R
Sbjct: 342 NAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHR 401
Query: 376 LG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
G + V N LV MYA+C I D++ +F E DVI+WN++++
Sbjct: 402 TGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVEL 461
Query: 423 -----DDNVSPDAVTLVSVISACASLGAVQVG 449
+ P++ T ++V+ AC+ +G V G
Sbjct: 462 FEQMRKTEIKPNSSTFLAVLCACSHVGFVDKG 493
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 35 HELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDG-LTNDKCNTKLVSMYGSF 93
HE+ Q S + +G KA HAL+ G +++ LVSMY
Sbjct: 362 HEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNGLVSMYARC 421
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + ++ VF M D S+ ++ + + ++ VE ++ MRK + ++ F VL
Sbjct: 422 GAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIKPNSSTFLAVL 481
Query: 154 KACCELRDIDEGMK 167
AC + +D+G++
Sbjct: 482 CACSHVGFVDKGIE 495
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 175/523 (33%), Positives = 283/523 (54%), Gaps = 25/523 (4%)
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
G D + L+ MY KC +G + VFD L +NVVSWT+++ G++QN E L+LF++
Sbjct: 4 GFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSK 63
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M V+ N T + + AC L L G+ +H +K G ++ + + +++DMY KCG
Sbjct: 64 MGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGR 123
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
I +A +F+ + +L+SW AMI GYT +G+ +KAL LF + F + T S L A
Sbjct: 124 INEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKA 183
Query: 357 SAQLGNLNMGRMVHSLGIRLGL---EDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
+ LG + G +H+ I G + V AL+D+Y KC + AR +F EK VI
Sbjct: 184 CSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVI 243
Query: 414 AWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
+W ++I G + ++ D L S++ A VQ G +HA++
Sbjct: 244 SWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFA 303
Query: 457 TK--QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
K G+ ++ V ++L+ Y KCG A +F M +N ++W+ MI GYG G G
Sbjct: 304 IKVPSGV---DISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
++ LF +M + +P++V + +L CSH+G+V +G + F +C ++HY CM
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
VDLL RAGRL+EA +++MP+E +V ++ L C ++ +LG+ + +L L +
Sbjct: 421 VDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENP 480
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YV++SN+YA G W ++REL+K + L K G S V++D
Sbjct: 481 VNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEID 523
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 236/462 (51%), Gaps = 35/462 (7%)
Query: 77 LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYK 135
L+ND L+ MYG G + A VFD M + S+ ++ + N + + ++ F K
Sbjct: 9 LSND-----LIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSK 63
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCR 194
+K +D F FS LKAC L +D G ++H VK G + V ++DMY+KC
Sbjct: 64 MGLSGVKPND-FTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCG 122
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE--GFVEGNQITLGSL 252
I + +F+ +N++SW +MIAGY ++ LVLF +M+E GF+ ++ T S
Sbjct: 123 RINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFL--DEFTFTST 180
Query: 253 VTACAKLRALHQGKWLHGYILKIGI--EINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
+ AC+ L A+ +G +H +++ G +N+ + AL+D+YVKCG + AR VF +
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
++SWTA+I+GY Q G ++++LF + + + ++S++ A + G+ +H
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300
Query: 371 SLGIRL--GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD----- 423
+ I++ G+ D +V N+++DMY KC +I +A +F ++VI+W +I+G
Sbjct: 301 AFAIKVPSGV-DISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359
Query: 424 ------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
D+ PD VT ++V+ C+ G V+ G + + + V
Sbjct: 360 KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC 419
Query: 472 LLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+++ + G + A+ + D+M E N W ++ + GD
Sbjct: 420 MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGD 461
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 198/393 (50%), Gaps = 35/393 (8%)
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
+G + L L+ MY KCG + A VFD + ++VSWTA++ G+ Q+G P ++L L
Sbjct: 1 MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAK 393
F+ + PN T ++ L A L L++GR +H + ++ G + V+ N+++DMY+K
Sbjct: 61 FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISG------------LDDNVSP-----DAVTLVSV 436
C I +A +FE +++I+WN++I+G L + D T S
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLL-SSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ AC+ LGA++ G+ +HA+ G L S N V AL++ Y KCG AR VF + EK
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
+ ++W+A+I GY +G+ S+ LF + +Q + I ++++ + +V +G +
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300
Query: 556 YSMCRDFKFVPS-MKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ VPS + VC ++D+ + G + EA MP +S + + G
Sbjct: 301 AFAIK----VPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVIS-WTVMITG--- 352
Query: 613 YSRFDLGEVMIKKMLELH-----PDKACYYVLV 640
Y + LG+ I+ E+ PD Y ++
Sbjct: 353 YGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVL 385
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 122/260 (46%), Gaps = 8/260 (3%)
Query: 56 LGLCKSTGSLKA---FHALLIVDGL---TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
L C G++K HA LI G N L+ +Y G + AR VF +
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
S+ +I Y + +E ++ +R+ + D F+ S ++ + + +G ++H
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300
Query: 170 CEIVKV-GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+KV G D V ++DMY KC I + ++F E +NV+SWT MI GY ++ +
Sbjct: 301 AFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGK 360
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI-GIEINSHLVTAL 287
E + LF+ M+ E + +T +++ C+ + +G+ + GI+ +
Sbjct: 361 EAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACM 420
Query: 288 LDMYVKCGNIRDARSVFDEL 307
+D+ + G +++A+++ D +
Sbjct: 421 VDLLGRAGRLKEAKNLVDSM 440
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 74/167 (44%), Gaps = 5/167 (2%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
L + + AF A+ + G+ CN+ ++ MY G + A +F MP + S+
Sbjct: 290 FALVQQGKQMHAF-AIKVPSGVDISVCNS-ILDMYLKCGMINEAERLFSEMPARNVISWT 347
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
VMI Y + L K+ + + M+ E D+ + VL C +++G + +
Sbjct: 348 VMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSY 407
Query: 176 GGPDSFV--LTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIA 219
G + V +VD+ + + ++ + D L+ NV W ++++
Sbjct: 408 HGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLS 454
>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
Length = 1167
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 199/672 (29%), Positives = 341/672 (50%), Gaps = 60/672 (8%)
Query: 28 NQQTPTQHELDQTFASFHSLPSIPC-LNLLGLCKSTGSL---KAFHALLIVDGLTND-KC 82
NQ++ ++ Q + P++ ++++ C+++ + K+ HA ++ L +
Sbjct: 525 NQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSV 584
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T L+SMY G A +F MP Y MI Y + + + M +K
Sbjct: 585 ATALLSMYAKLGDXNSAXFIFYQMPRKTSYR-DSMISGYGIMSMGRPFFWVRLLMHLAIK 643
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
F D + + L+ Y+ C + SS ++
Sbjct: 644 TGKEF---------------DSXLNIS--------------NALLAFYSDCGKLSSSFKL 674
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F + +N +SW ++I+G V N ++ + L ++M++ +E + +TL S++ C L
Sbjct: 675 FQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENL 734
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
QG LHGY +K G + LV AL+ MY CG+I + +F+ + +VSW A+I GY
Sbjct: 735 IQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGY 794
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDY 381
++ + F PN+VT+ ++L + L G+ +H+ +R G + +
Sbjct: 795 RFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCXTLLQ---GKSIHAFAVRTGVIVET 851
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDD 424
+I +L+ MYA+ I ++FE ++D+ WN+I+S L
Sbjct: 852 PIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHA 911
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V PD +T +S+ISAC L ++ + +S+ AY ++G ++ + AL++ +A+CG+
Sbjct: 912 RVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGF-DKHIVISNALIDLFARCGNISI 970
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A+ +F+ + K+ V+WS MI GYG+ GD +LAL S M ++P+ + + ++LSACSH
Sbjct: 971 AKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSH 1030
Query: 545 TGMVGEGWKCFYSMCRDFKFVPS-MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
G + +GW F SM + VP M+HY CMVDLL R G+L EA +F+E +P +P VSL
Sbjct: 1031 GGFIDQGWMIFNSMVEEG--VPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLL 1088
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
+ L C ++ LGE + + EL P + YV++ N+YA+ GRW+ N+VR M++R
Sbjct: 1089 ESLLXACIIHGNVKLGEKICSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEER 1148
Query: 664 GLSKSPGCSLVD 675
L K PG SLV+
Sbjct: 1149 QLRKIPGFSLVE 1160
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 138/494 (27%), Positives = 239/494 (48%), Gaps = 20/494 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L L LC++ +LK ++LIV L D+ ++S + G + A S F+++ P
Sbjct: 251 LRLFDLCRNIENLKPLGSVLIVRDLMRDEYVVAEFIISCF-HLGAPELALSAFEAIEKPS 309
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ +MIR + L++D++ Y R D+F F V+KAC L + VHC
Sbjct: 310 VFLQNLMIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHC 369
Query: 171 EIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+++ ++ V+ T LVD YAK + +R V D+ ++V+W ++I+GY N +E
Sbjct: 370 IVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKE 429
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ ++ E ++ N T S++ C +++ L GK +HG+++K G + L AL+
Sbjct: 430 VFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALIS 489
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY GN+ AR +FD ++V W +MI Y Q+ +A K+F A+ PN VT
Sbjct: 490 MYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVT 549
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
S++ N G+ +H+ ++ L+ +V AL+ MYAK A +IF
Sbjct: 550 FVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMP 609
Query: 409 EKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
K +S+ISG ++S V++ L + K+ S + +
Sbjct: 610 RKTSYR-DSMISG------------YGIMSMGRPFFWVRLLMHLAIKTGKE--FDSXLNI 654
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
ALL FY+ CG S+ +F M +N ++W+ +I G GD ++AL M E++
Sbjct: 655 SNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKM 714
Query: 529 QPNEVIFTTILSAC 542
+ + V +I+ C
Sbjct: 715 ELDLVTLISIIPIC 728
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 124/265 (46%), Gaps = 20/265 (7%)
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETT 407
T V+ A + LG + + VH + +R E+ VI ALVD YAK + AR + +
Sbjct: 347 TFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDFYAKTGRMVKARLVLDKI 406
Query: 408 SEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGS 450
S+ D++ WN++ISG L+ + P+ T S+I C + + +G
Sbjct: 407 SQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGK 466
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
S+H + K G SS+ ++ AL++ YA G+ AR +FD+ EKN V W++MI Y
Sbjct: 467 SIHGFVVKSGF-SSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQN 525
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
+ +F ML +QPN V F +I+ C ++ G K ++ ++ +
Sbjct: 526 QKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXG-KSLHAHVMKYRLDSQLSV 584
Query: 571 YVCMVDLLARAGRLEEALEFMENMP 595
++ + A+ G A MP
Sbjct: 585 ATALLSMYAKLGDXNSAXFIFYQMP 609
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 166/469 (35%), Positives = 269/469 (57%), Gaps = 22/469 (4%)
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L LF+RM + + T +CA L +L H + K+ + + H +L+
Sbjct: 106 ALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLIT 165
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHV 348
Y +CG + AR VFDE+ D VSW +MI GY ++G +A+++F + D F P+ +
Sbjct: 166 AYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEM 225
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETT 407
++ S+L A +LG+L +GR V + G+ + I +AL+ MYAKC + AR IF+
Sbjct: 226 SLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGM 285
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
+ +DVI WN++ISG +D V+ + +TL +V+SACA++GA+ +G
Sbjct: 286 AARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGK 345
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+ Y++++G +++V TAL++ YAK G +A+ VF M +KN +W+AMI
Sbjct: 346 QIDEYASQRGF-QHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAH 404
Query: 511 GDGGGSLALFSDMLNEE--VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G +L+LF M +E +PN++ F +LSAC H G+V EG++ F M F VP +
Sbjct: 405 GKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKI 464
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY CMVDLLARAG L EA + + MP +PD GA L C D+GE +++ +LE
Sbjct: 465 EHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERVMRMILE 524
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ P + Y++ S +YA+ W ++R LM+Q+G++K+PGCS ++++
Sbjct: 525 VDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVE 573
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 148/486 (30%), Positives = 250/486 (51%), Gaps = 37/486 (7%)
Query: 52 CLNLLG-LCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSM-PNP 109
CL L C ST +L+ H ++V+ + N L+S + Y+ +F + P+P
Sbjct: 26 CLVFLAKQCSSTKTLQQVHTQMVVNSSIHTP-NNHLLSKAIHLKNFPYSSLLFSHIAPHP 84
Query: 110 DFYSFQVMIR-----WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
+ Y+F +MIR W+ + + F++ M L DNF F +C L +
Sbjct: 85 NDYAFNIMIRALTTTWH---NYPLALSLFHRMMSLSLTP-DNFTFPFFFLSCANLASLSH 140
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
H + K+ D L+ YA+C + S+R+VFDE ++ VSW SMIAGY +
Sbjct: 141 ACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAK 200
Query: 224 NDCAQEGLVLFNRM--REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
CA+E + +F M R+GF E ++++L SL+ AC +L L G+W+ G++++ G+ +NS
Sbjct: 201 AGCAREAVEVFREMGRRDGF-EPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNS 259
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
++ +AL+ MY KCG + AR +FD + + D+++W A+I GY Q+G D+A+ LF K
Sbjct: 260 YIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKED 319
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADA 400
N +T+ +VLSA A +G L++G+ + + G + D V AL+DMYAK + +A
Sbjct: 320 CVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNA 379
Query: 401 RYIFETTSEKDVIAWNSIISGLDDN-------------------VSPDAVTLVSVISACA 441
+ +F+ +K+ +WN++IS L + P+ +T V ++SAC
Sbjct: 380 QRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACV 439
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTW 500
G V G L + L + + +++ A+ G A + M EK + VT
Sbjct: 440 HAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTL 499
Query: 501 SAMIGG 506
A++G
Sbjct: 500 GALLGA 505
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 234/463 (50%), Gaps = 50/463 (10%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNT-KLVSMYGSFGHVKYARSVFDSMPN 108
+ C NL L + A H+LL L +D L++ Y G V AR VFD +P+
Sbjct: 130 LSCANLASLSHAC----AAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPH 185
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMK 167
D S+ MI Y ++ VE ++ M +R E D +L AC EL D++ G
Sbjct: 186 RDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRW 245
Query: 168 VHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
V +V+ G +S++ + L+ MYAKC ++ S+R++FD ++V++W ++I+GY QN
Sbjct: 246 VEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGM 305
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
A E ++LF+ M+E V N+ITL ++++ACA + AL GK + Y + G + + + TA
Sbjct: 306 ADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATA 365
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT--DKKWADFF 344
L+DMY K G++ +A+ VF ++ + SW AMI G +AL LF +
Sbjct: 366 LIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGAR 425
Query: 345 PNHVTIASVLSASAQLGNLNMG-RMVHSLGIRLGL----EDYTVINALVDMYAKCHVIAD 399
PN +T +LSA G ++ G R+ + GL E Y+ +VD+ A+
Sbjct: 426 PNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSC---MVDLLAR------ 476
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSS-----LHA 454
A +++E AW+ +I + + PD VTL +++ AC S V +G L
Sbjct: 477 AGHLYE--------AWD-LIRKMPEK--PDKVTLGALLGACRSKKNVDIGERVMRMILEV 525
Query: 455 YSTKQG--LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ G ++SS +Y A LN + SARM MR+K
Sbjct: 526 DPSNSGNYIISSKIY---ANLNMW-----EDSARMRL-LMRQK 559
>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
Length = 576
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 185/531 (34%), Positives = 285/531 (53%), Gaps = 25/531 (4%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
G + AR VFD +P PD ++ +IR Y + ++ Y+ M + + F VL
Sbjct: 47 GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106
Query: 154 KACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
KAC L D+ G +H VG D FV T L+D+Y +C G + VF + ++VV
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166
Query: 213 SWTSMIAGYVQNDCAQEGLV-LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
+W +M+AGY + + L + G + N TL SL+ A+ AL QG +H Y
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226
Query: 272 ILKIGIEINSHLV---TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
L+ ++ N V TALLDMY KC ++ A VF + + V+W+A+I G+
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286
Query: 329 DKALKLFTDKKWADF-FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINA 386
+A LF D F + ++AS L A L +L MG +H+L + G+ D T N+
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPD 429
L+ MYAK +I +A +F+ + KD I++ +++SG N V PD
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T+VS+I AC+ L A+Q G H +GL + + +L++ YAKCG +R VF
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSVIIRGL-ALETSICNSLIDMYAKCGRIDLSRQVF 465
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M ++ V+W+ MI GYG+ G G + LF M N+ +P++V F +++ACSH+G+V
Sbjct: 466 DKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVT 525
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
EG F +M + +P M+HY+CMVDLLAR G L+EA +F+++MP++ DV
Sbjct: 526 EGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADV 576
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/444 (27%), Positives = 214/444 (48%), Gaps = 37/444 (8%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+RQVFD + ++ ++I Y + L+ M V N+ T ++ AC+
Sbjct: 52 ARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSA 111
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L L G+ +H + +G+ + + TAL+D+Y++C A +VF ++ D+V+W AM
Sbjct: 112 LADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAWNAM 171
Query: 319 IVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
+ GY G A+ D + PN T+ S+L AQ G L G VH+ +R
Sbjct: 172 LAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAY 231
Query: 378 L----EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--LDDNVSP--- 428
L E + AL+DMYAKC + A +F + ++ + W+++I G L D ++
Sbjct: 232 LDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFN 291
Query: 429 -------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
A ++ S + CASL +++G+ LHA K G+ +++ G +LL+
Sbjct: 292 LFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGI-HADLTAGNSLLSM 350
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
YAK G A M+FD + K+T+++ A++ GY G + +F M VQP+
Sbjct: 351 YAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATM 410
Query: 536 TTILSACSHTGMVGEGWKCFYS--MCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFM 591
+++ ACSH + G +C + + R S +C ++D+ A+ GR++ + +
Sbjct: 411 VSLIPACSHLAALQHG-RCSHGSVIIRGLALETS----ICNSLIDMYAKCGRIDLSRQVF 465
Query: 592 ENMPIEPDVS----LFGAFLHGCG 611
+ MP VS + G +HG G
Sbjct: 466 DKMPARDIVSWNTMIAGYGIHGLG 489
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/424 (28%), Positives = 200/424 (47%), Gaps = 31/424 (7%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
C L LC + HA GL D +T L+ +Y A +VF MP D
Sbjct: 109 CSALADLCAG----RTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRD 164
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKR--LKEHDNFVFSKVLKACCELRDIDEGMKV 168
++ M+ Y + +Y + M+ R L+ + + + S +L + + +G V
Sbjct: 165 VVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVS-LLPLLAQHGALFQGTSV 223
Query: 169 HCEIVKV----GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
H ++ + T L+DMYAKC+ + + +VF +N V+W+++I G+V
Sbjct: 224 HAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLC 283
Query: 225 DCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
D E LF M EG + ++ S + CA L L G LH + K GI +
Sbjct: 284 DRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTA 343
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
+LL MY K G I +A +FDE+ D +S+ A++ GY Q+G ++A +F + +
Sbjct: 344 GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P+ T+ S++ A + L L GR H I GL + ++ N+L+DMYAKC I +R
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQ 463
Query: 403 IFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGA 445
+F+ +D+++WN++I+G + PD VT + +I+AC+ G
Sbjct: 464 VFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGL 523
Query: 446 VQVG 449
V G
Sbjct: 524 VTEG 527
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 179/377 (47%), Gaps = 26/377 (6%)
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
L+ ++ G + AR VFD + + D ++ A+I Y+ G A+ L+ + PN
Sbjct: 40 LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T VL A + L +L GR +H+ +GL D V AL+D+Y +C A +F
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159
Query: 407 TSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQV 448
+DV+AWN++++G ++ + P+A TLVS++ A GA+
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219
Query: 449 GSSLHAYSTKQGLLSS--NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
G+S+HAY + L + V +GTALL+ YAKC A VF M +N VTWSA+IGG
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGG 279
Query: 507 YGMQGDGGGSLALFSDMLNEEVQ-PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
+ + + LF DML E + + + L C+ + G + +++
Sbjct: 280 FVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQ-LHALLAKSGIH 338
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
+ ++ + A+AG + EA + + I+ +S +GA L G + + ++ KK
Sbjct: 339 ADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTIS-YGALLSGYVQNGKAEEAFLVFKK 397
Query: 626 M--LELHPDKACYYVLV 640
M + PD A L+
Sbjct: 398 MQACNVQPDIATMVSLI 414
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 6/251 (2%)
Query: 56 LGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L +C S L+ HALL G+ D L+SMY G + A +FD + D
Sbjct: 313 LRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDT 372
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ ++ Y N ++ +K M+ + D ++ AC L + G H
Sbjct: 373 ISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGS 432
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
++ G ++ + L+DMYAKC I SRQVFD+ +++VSW +MIAGY + +E
Sbjct: 433 VIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEA 492
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTALLD 289
LF M+ E + +T L+ AC+ + +GK W K GI ++D
Sbjct: 493 TTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVD 552
Query: 290 MYVKCGNIRDA 300
+ + G + +A
Sbjct: 553 LLARGGFLDEA 563
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 309/584 (52%), Gaps = 53/584 (9%)
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
E ++ ++ L+ C + + G +HCEI+K GG D F L++MY K + + +
Sbjct: 35 EFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASK 94
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLR 260
+FDE ++N +S+ ++I GY ++ E + LF R+ REG E N +++
Sbjct: 95 LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGH-ELNPFVFTTILKLLVSTD 153
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
G +H I K+G E N+ + TAL+D Y CG + AR VFD + D+VSWT M+
Sbjct: 154 CGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVT 213
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
+ ++ +ALKLF+ + F PN+ T ASV A L ++G+ VH ++ E
Sbjct: 214 CFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL 273
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
D V AL+D+Y K I DAR FE +KDVI W+ +I+ +
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMR 333
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V P+ T SV+ ACA++ + +G+ +H + K G L S+V+V AL++ YAKCG
Sbjct: 334 QALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIG-LHSDVFVSNALMDVYAKCGRM 392
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ------------- 529
+++ +F +N VTW+ +I G+ GDG +L LF +ML VQ
Sbjct: 393 ENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRAC 452
Query: 530 ------------------PNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
P+++ F +LSAC++ G++ +G F SM +D P ++HY
Sbjct: 453 ASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHY 512
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CMV LL R G L++A++ ++ +P +P V ++ A L C +++ +LG + +++LE+ P
Sbjct: 513 TCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEP 572
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+VL+SN+YA+ RW V VR+ MK++G+ K PG S ++
Sbjct: 573 QDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIE 616
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 150/481 (31%), Positives = 249/481 (51%), Gaps = 32/481 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++MY + A +FD MP + SF +I+ Y + + + +E + + + E +
Sbjct: 79 LLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELN 138
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD 204
FVF+ +LK + G +H I K+G ++FV T L+D Y+ C + +R+VFD
Sbjct: 139 PFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFD 198
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
L K++VSWT M+ + +NDC +E L LF++MR + N T S+ AC L A
Sbjct: 199 GILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDV 258
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +HG LK E++ ++ ALLD+Y K G+I DAR F+E+ D++ W+ MI Y Q
Sbjct: 259 GKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQ 318
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
S +A+++F + A PN T ASVL A A + LN+G +H I++GL D V
Sbjct: 319 SDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFV 378
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
NAL+D+YAKC + ++ +F + ++ + WN++I G L+ V
Sbjct: 379 SNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRV 438
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
VT S + ACASL A++ G +H+ + K L+ +VG +L+ A G +
Sbjct: 439 QATEVTYSSALRACASLAALEPGLQIHSLTVKPDKLT---FVG--VLSACANAGLLDQGQ 493
Query: 487 MVFDAMREKNTVT-----WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
F +M + + + ++ M+ G G ++ L ++ QP+ +++ +L A
Sbjct: 494 AYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLGA 550
Query: 542 C 542
C
Sbjct: 551 C 551
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/437 (27%), Positives = 200/437 (45%), Gaps = 54/437 (12%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
+N T L+ Y G V AR VFD + D S+ M+ + ND +K+ ++ + M
Sbjct: 172 SNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQM 231
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDI 196
R + +NF F+ V KAC L D G VH C + D +V L+D+Y K DI
Sbjct: 232 RMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDI 291
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+R+ F+E K+V+ W+ MIA Y Q+D ++E + +F +MR+ V NQ T S++ AC
Sbjct: 292 DDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQAC 351
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A + L+ G +H +++KIG+ + + AL+D+Y KCG + ++ +F E + V+W
Sbjct: 352 ATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWN 411
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+IVG+ Q G +KAL+LF + VT +S L A A L L G +HSL ++
Sbjct: 412 TVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVK- 470
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSV 436
PD +T V V
Sbjct: 471 ---------------------------------------------------PDKLTFVGV 479
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EK 495
+SACA+ G + G + + + + T ++ + G A + D + +
Sbjct: 480 LSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQP 539
Query: 496 NTVTWSAMIGGYGMQGD 512
+ + W A++G + D
Sbjct: 540 SVMVWRALLGACVIHND 556
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 295/581 (50%), Gaps = 55/581 (9%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F +LK C RD+ G +H +K P ++ + +Y+KC + +R+ F +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 208 DKNVVSWTSMIAGYVQN-----------------------------DCAQ--EGLVLFNR 236
D NV S+ ++IA Y + DC + L LF+
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
MRE ++ + TL +++TAC L G+ LH + G + + ALL Y K G+
Sbjct: 131 MREMGLDMDXFTLSAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 297 IRDARSVFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+ DA+ VF + I D VSW +MIV Y Q KAL LF + + T+ASVL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 356 ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHV-IADARYIFETTSEKDVI 413
A L +L+ G H I+ G ++ V + L+D+Y+KC ++D R +FE +E D++
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 414 AWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAY 455
WN+++SG N P+ + V VISAC++L + G +H+
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
+ K + S+ + V AL+ Y+KCG+ Q AR +FD M E NTV+ ++MI GY G
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
SL LF ML ++ P + F ++LSAC+HTG V EGW F M F P +HY CM+
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DLL RAG+L EA + MP P + + L C + +L ++L+L P A
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YV++SN+YAS GRW V VR+ M+ RG+ K PGCS +++
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEV 589
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 225/457 (49%), Gaps = 38/457 (8%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++ Y A +FD +P PD S+ +I Y + + MR+ + D
Sbjct: 80 IIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMD 139
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKV-GGPDSFVL--TGLVDMYAKCRDIGSSRQV 202
F S V+ ACC+ D G+ V V G DS+V L+ Y K D+ +++V
Sbjct: 140 XFTLSAVITACCD----DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195
Query: 203 FDETLD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
F ++ VSW SMI Y Q+ + L LF M + + TL S++TA L
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMIV 320
L G HG ++K G NSH+ + L+D+Y KC G + D R VF+E+ DLV W M+
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315
Query: 321 GYTQS-GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY+Q+ + + AL+ F + + PN + V+SA + L + + G+ +HSL ++ +
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIP 375
Query: 380 D--YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
+V NAL+ MY+KC + DAR +F+ +E + ++ NS+I+G
Sbjct: 376 SNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQW 435
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L+ ++P ++T +SV+SACA G V+ G + ++ + + +++ + G
Sbjct: 436 MLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAG 495
Query: 481 ---DAQS--ARMVFDAMREKNTVTWSAMIGGYGMQGD 512
+A++ ARM F+ ++ W++++G G+
Sbjct: 496 KLSEAENLIARMPFNP----GSIGWASLLGACRTHGN 528
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
C NL S K H+L + + +++ + L++MY G+++ AR +FD M
Sbjct: 353 CSNL----SSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ S MI Y + + + + ++ M +R + F VL AC ++EG
Sbjct: 409 NTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG 464
>gi|297742226|emb|CBI34375.3| unnamed protein product [Vitis vinifera]
Length = 814
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 201/650 (30%), Positives = 330/650 (50%), Gaps = 33/650 (5%)
Query: 53 LNLLGLCKSTGSLK---AFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
+L L K G L+ H + + GL N + L+ Y G V A F
Sbjct: 122 FSLSSLVKGCGVLEQNEVAHGVCLKMGLLNGFVVSGLLDGYAKLGDVDSAEKCFKEFYIA 181
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK--EHDNFVFSKVLKACCELRDIDEGMK 167
D + M+ + N ++ E + MR E + F + VL A L D+ EG +
Sbjct: 182 DSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGA---LSDVREGEQ 238
Query: 168 VHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
V VK+G G + L++MY++C + ++FDE + +VVSWT I
Sbjct: 239 VFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVVSWTERIGAAYD- 297
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
A E LF + G +E N+ L ++++A + + L G+ + G K G + + +
Sbjct: 298 --AIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKAGYLLVASVN 355
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+ MY KCG + AR +FDE+ D VSW ++I GY ++G +ALK+F+ +
Sbjct: 356 NALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKVFSQMRDYLLQ 415
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYI 403
PN T+AS+L +A +HS ++LG + D ++++ L+ Y KC++I +++ +
Sbjct: 416 PNKYTLASILEVAANSNFPEQAMQIHSYIVKLGFIVDDSMLSCLITAYGKCNMICESKRV 475
Query: 404 FETTSEKDVIAWNSII-----------------SGLDDNVSPDAVTLVSVISACASLGAV 446
+ S+ +V+ N++ +G + D +TL V+ AC +L +
Sbjct: 476 YSDISQINVLHLNAMAATLVHAGCHADALKLFQTGWRLHQEVDCITLSIVLKACGALTDL 535
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ G ++H+ + K G+ N +V +A+++ Y KCG A F + + N V W+AM+ G
Sbjct: 536 EYGRNIHSMALKSGMSQDN-FVESAVIDVYCKCGTVDEAAKTFMNVSKNNLVAWNAMVMG 594
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
Y G LF+ ML +QP+E+ + +L++C H G+V E SM VP
Sbjct: 595 YAQHGCYHEVFELFNKMLELGIQPDEITYLGVLNSCCHAGLVNEAHTYLSSMLELHGVVP 654
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++HY CM+DL R G LE+A ++ MPI PD ++ L GC ++ DLGEV KK+
Sbjct: 655 CLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNVDLGEVAAKKL 714
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+EL P+ YVL+SNLYAS GRW V ++R +MK++ + K PG S + +
Sbjct: 715 IELQPENDSAYVLLSNLYASAGRWNAVGKLRRVMKKKIICKEPGSSWIQV 764
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 192/386 (49%), Gaps = 27/386 (6%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D+F+ + +V+ +A D +R+ +T + VSW S+I+GY + LFN +R
Sbjct: 54 DAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQPGPVFDLFNGLR 113
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ ++ +L SLV C L Q + HG LK+G+ +N +V+ LLD Y K G++
Sbjct: 114 RSGLSPDEFSLSSLVKGCG---VLEQNEVAHGVCLKMGL-LNGFVVSGLLDGYAKLGDVD 169
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK--WADFFPNHVTIASVLSA 356
A F E D V WTAM+ G+ +G +K ++F + + N ++ SVL A
Sbjct: 170 SAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELNEFSLTSVLGA 229
Query: 357 SAQLGNLNMGRMVHSLGIRLGLEDYTVI---NALVDMYAKCHVIADARYIFETTSEKDVI 413
L ++ G V L +++GL I NAL++MY++C +DA +F+ +E DV+
Sbjct: 230 ---LSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKMFDEMTEPDVV 286
Query: 414 AWNSIISG--------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+W I L N+ + L++V+SA ++ G + K
Sbjct: 287 SWTERIGAAYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLLKSGRQIQGLCQKA 346
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G L V AL+ Y KCG+ +AR +FD M ++V+W+++I GY G +L +
Sbjct: 347 GYLLV-ASVNNALIFMYGKCGEMVAARHIFDEMLCGDSVSWNSLIAGYAENGLMKQALKV 405
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHT 545
FS M + +QPN+ +IL +++
Sbjct: 406 FSQMRDYLLQPNKYTLASILEVAANS 431
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 29/303 (9%)
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
+ LK G +++ L + +++ + G+ AR + D VSW ++I GY + P
Sbjct: 43 YALFLKSGFALDAFLSSFIVNRFAISGDFARARRFLLDTPYPDTVSWNSLISGYARFRQP 102
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALV 388
LF + + P+ +++S++ G L + H + +++GL + V++ L+
Sbjct: 103 GPVFDLFNGLRRSGLSPDEFSLSSLVKGC---GVLEQNEVAHGVCLKMGLLNGFVVSGLL 159
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSII-------------------SGLDDNVSPD 429
D YAK + A F+ D + W +++ GL + +
Sbjct: 160 DGYAKLGDVDSAEKCFKEFYIADSVVWTAMVCGFVWNGEFEKGREVFVEMRGLGLGLELN 219
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLL-SSNVYVGTALLNFYAKCGDAQSARMV 488
+L SV+ A L V+ G + S K GLL ++++ AL+N Y++CG A +
Sbjct: 220 EFSLTSVLGA---LSDVREGEQVFGLSVKMGLLCGCSIHLNNALMNMYSRCGSKSDAIKM 276
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
FD M E + V+W+ IG D + LF +L+ ++ NE + +LSA ++
Sbjct: 277 FDEMTEPDVVSWTERIGA---AYDAIEAFELFRLVLSGNMEVNEYMLINVLSAMREPKLL 333
Query: 549 GEG 551
G
Sbjct: 334 KSG 336
>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 562
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/549 (32%), Positives = 295/549 (53%), Gaps = 23/549 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIV---KVGGPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++S +L++ +G VH + PD + T LV Y+ D+ ++R+VFD
Sbjct: 13 LYSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFD 72
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++VVSWT+M++GY +N QE L LF M NQ T GS V AC R
Sbjct: 73 GMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCARS 132
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H K + + +AL+DM+++CG++ DAR +F E+ DLVSW +++ G+ +
Sbjct: 133 GEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVE 192
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV- 383
+ + AL LF P+H T S L A + L ++H+ I+LG D V
Sbjct: 193 REHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVA 252
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--LDDNVSPDA----------- 430
I +L+D YAKC ++ AR I+++ E D+++ ++ISG +D N S DA
Sbjct: 253 IASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKG 312
Query: 431 -----VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ L S++ CA++ +++ G+ +HAY K+ + ++ + AL++ YAK G+ +
Sbjct: 313 LRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMG-DLALDNALVDMYAKSGEFLDS 371
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R FD M +N ++W+++I G G ++ LF+ M + V+PN+V F ++LSACSH+
Sbjct: 372 RRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHS 431
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
GM+ +G + F SM + P KHY VDLLAR G+LE+A ++N E S++G
Sbjct: 432 GMMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSSMYGT 491
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ LGE K +L + P+ + Y +++N+YA W + R+L+ +
Sbjct: 492 MLGACKVHGNMPLGETAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLVETSK 551
Query: 666 SKSPGCSLV 674
K G S++
Sbjct: 552 GKEAGFSVI 560
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/445 (29%), Positives = 226/445 (50%), Gaps = 27/445 (6%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
NTKLV Y FG V AR VFD MP+ S+ M+ Y N ++ ++ + M +
Sbjct: 51 NTKLVIFYSHFGDVAAARRVFDGMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGA 110
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ F F ++AC R G ++H C D FV + L+DM+ +C +G +R+
Sbjct: 111 RPNQFTFGSAVRACTGARCARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARR 170
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLR 260
+F E K++VSW S++ G+V+ + + L LF+ M R+G + + T GS + AC +
Sbjct: 171 LFAEMERKDLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLP-DHFTFGSALKACGAIS 229
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L + +H I+K+G + + +L+D Y KC ++ AR ++D +C DLVS TA+I
Sbjct: 230 VLFNVELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALIS 289
Query: 321 GYT-QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIRLGL 378
GY+ Y D A+KLF + + ++S+L A + ++ G +H+ + + +
Sbjct: 290 GYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPM 349
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------------- 422
D + NALVDMYAK D+R F+ ++VI+W S+I+
Sbjct: 350 GDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARM 409
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSS-LHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+D V P+ VT +S++SAC+ G + G + +K G+ + +A ++ A+ G
Sbjct: 410 EEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMSKYGIDPRFKHYSSA-VDLLARGG 468
Query: 481 DAQSARMVFDAMREKNTVTWSAMIG 505
+ A M+ ++ NT S+M G
Sbjct: 469 QLEDAWML---VQNTNTECKSSMYG 490
>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
Length = 916
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/618 (30%), Positives = 324/618 (52%), Gaps = 23/618 (3%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
T L++ Y G + A VF S N + ++ MI+ ND + + ++ M
Sbjct: 300 TTSSVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEM 359
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRD 195
R + + D ++ AC + + EG +VH I+K G + V L+D+Y KC D
Sbjct: 360 RSK-NQPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCND 418
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDC-AQEGLVLFNRMREGFVEGNQITLGSLVT 254
++R +F ++++SW +MI+GY +ND +E +F + + T+ +++
Sbjct: 419 PSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIP 478
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-DLV 313
+C + L+ GK +H +ILK G +L+ MY+ CG+ A S+ + + I D++
Sbjct: 479 SCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDII 538
Query: 314 SWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
SW IVG Q+G AL+ F P+ +T+ SVLS L ++G+ +H +
Sbjct: 539 SWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCM 598
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------ 425
++ +E + V NAL+ MY + A IF + +++ +WN +ISG N
Sbjct: 599 ALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRA 658
Query: 426 ---------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
P+ +++V +I AC LG ++ G ++H + + GL +NV++ +L++ Y
Sbjct: 659 FQFYKKMEDFEPNEISIVGIICACTQLGDLRQGKNIHGHVVRFGL-QTNVFISASLVDMY 717
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+KCG + VF++ EK+ W++MI +G G G S+ +F M N V+ F
Sbjct: 718 SKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFI 777
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+LSACSH+G+ EG K ++ M F +P+ +H+VC+VD+L RAGRL+EA +F+E++P
Sbjct: 778 ALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPS 837
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
+ ++GA L C S + E + K +L L P+ + YYV +SNLYA W QV
Sbjct: 838 KQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYVTMSNLYAYQDMWSGAVQV 897
Query: 657 RELMKQRGLSKSPGCSLV 674
R++++ +GL K G S++
Sbjct: 898 RDILQDKGLMKPRGRSII 915
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 286/580 (49%), Gaps = 39/580 (6%)
Query: 67 AFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
AFH + + L D NT L+ MY G + VF MP D S+ M+ N
Sbjct: 185 AFHGMALKRCLDTDLSLWNT-LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFN 243
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI-DEGMKVHCEIVKVGGPD--SF 181
L + ++K M + + D S VL AC L+D+ G VH ++K+G D S
Sbjct: 244 GLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSS 303
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V L+ Y + ++ +VF T +KN+V+W +MI G V+ND E + +F MR
Sbjct: 304 VANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSK- 362
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDA 300
+ + TL ++++AC L +GK +HGYI+K G I + +LLD+Y+KC + A
Sbjct: 363 NQPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTA 422
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQS-GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
R +F + DL+SW MI GY+++ ++A +F T+ +V+ +
Sbjct: 423 RILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFC 482
Query: 360 LGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFET-TSEKDVIAWNS 417
+LN G+ VHS ++ G L + N+L+ MY C A + E+ T D+I+WN+
Sbjct: 483 PQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNT 542
Query: 418 IISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
I G N ++PD++TLVSV+S C +L +G S+H + K+
Sbjct: 543 AIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKR 602
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L+ N+ V ALL Y + GD +SA ++F ++ +N +W+ MI G+ +G +
Sbjct: 603 -LIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQF 661
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
+ M E+ +PNE+ I+ AC+ G + +G K + F ++ +VD+ +
Sbjct: 662 YKKM--EDFEPNEISIVGIICACTQLGDLRQG-KNIHGHVVRFGLQTNVFISASLVDMYS 718
Query: 580 RAGRLEEALEFMENMPIEPDV----SLFGAF-LHGCGLYS 614
+ GRL+ ++ E+ E + S+ AF HG GL S
Sbjct: 719 KCGRLDISIRVFES-SAEKSIACWNSMISAFGFHGLGLKS 757
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 245/517 (47%), Gaps = 45/517 (8%)
Query: 151 KVLKAC--CELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ L AC + D +HC +K G D V T ++ Y++ RD+ S+ QVFDE
Sbjct: 66 RALGACRGASREEADGVAALHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAA 125
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE--GFVEGNQITLGSLVTACAKLRALHQG 265
+++ W + I+ N + +VLF M + G ++ + + +++ ++ R+L G
Sbjct: 126 APDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVIDSTSMVI--MLSGASRARSLEHG 183
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
HG LK ++ + L L+DMY KCG+ + VF + D SW +M+ G +
Sbjct: 184 IAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFN 243
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL-NMGRMVHSLGIRLGLEDYT-- 382
G + + F + + F + V+++ VLSA + L +L + G VHS I+LG ED T
Sbjct: 244 GLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSS 303
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------V 426
V N+L+ Y + A +F +TS K+++ WN++I GL +N
Sbjct: 304 VANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN 363
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD TLV++ISAC G + G +H Y K+G + VG +LL+ Y KC D +AR
Sbjct: 364 QPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTAR 423
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGD-GGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
++F M ++ ++W+ MI GY G + A+F +L+E + ++ +C
Sbjct: 424 ILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCP 483
Query: 546 GMVGEGWKCFYSMCRDFKFVP------SMKH-YVCMVDLLARAGRLEEALEFMENMPIEP 598
+ G K +S + F+ S+ H Y+C D LA A +E++
Sbjct: 484 QDLNFG-KSVHSFILKYGFLTGVSAANSLIHMYICCGDSLA-------AFSLLESITPIS 535
Query: 599 DVSLFGAFLHGC---GLYSRFDLGEVMIKKMLELHPD 632
D+ + + GC GLY + L L+PD
Sbjct: 536 DIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPD 572
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 252/540 (46%), Gaps = 38/540 (7%)
Query: 34 QHELDQTFASFHSLPSIPCLNLLGLCKSTG-----SLKAFHALLIVDGLTNDK-CNTKLV 87
H LD+T S+ + LG C+ + A H + G D T ++
Sbjct: 51 HHLLDETPRRASSI-----VRALGACRGASREEADGVAALHCAALKSGAVLDPPVRTSVI 105
Query: 88 SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
+ Y V A VFD PD + I LN Y D V ++ M L D+
Sbjct: 106 TAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVIDST 165
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
+L R ++ G+ H +K D + L+DMYAKC D SS VF
Sbjct: 166 SMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRM 225
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ-G 265
++ SW SM++G + N A+ F M + ++++L +++AC+ L+ L G
Sbjct: 226 PYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFG 285
Query: 266 KWLHGYILKIGIE-INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ +H ++K+G E S + +L+ Y + G A VF + +LV+W AMI G +
Sbjct: 286 ESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVE 345
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYT 382
+ ++A+ +F + + + P+ T+ +++SA G L G+ VH I+ G E+ +
Sbjct: 346 NDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECS 404
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------------LDD 424
V N+L+D+Y KC+ + AR +F T +D+I+WN++ISG L +
Sbjct: 405 VGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSE 464
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+S T+V+VI +C + G S+H++ K G L + V +L++ Y CGD+ +
Sbjct: 465 GLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFL-TGVSAANSLIHMYICCGDSLA 523
Query: 485 ARMVFDAMRE-KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQPNEVIFTTILSAC 542
A + +++ + ++W+ I G G G +L F M + + P+ + ++LS C
Sbjct: 524 AFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVC 583
>gi|449451283|ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
gi|449519310|ref|XP_004166678.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Cucumis sativus]
Length = 565
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/548 (32%), Positives = 301/548 (54%), Gaps = 32/548 (5%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
+ S +LK C D+ + VH +++ G DSF++T + I S VFD
Sbjct: 30 YSISALLKLCKTHIDLHQ---VHAHLIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDR 86
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
L + W S+++GY + + L+ RM+ ++ T SL+ CA + +G
Sbjct: 87 VLSPSTFLWNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEG 146
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
LHG IL+ G++ + ++ T+L+++Y K G I AR VFD + ++VSWTAMIVGY+
Sbjct: 147 MALHGSILRCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSI 206
Query: 326 GYPDKALKLFTDKKWADFFP--NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
G +A +LF D P N + +++ ++G++ + ++
Sbjct: 207 GNLVEAKRLF------DLMPERNVASWNAIIGGYMKMGDVKSAEKAFD---EMPEKNVVS 257
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
++D YAK + AR +F+ E+D+IAW+++ISG N V
Sbjct: 258 FTTMIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSSRNV 317
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD L S++ AC+ LG + + + +Y+T+ + +V AL++ AKCG+ + A
Sbjct: 318 KPDKFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAM 377
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F+ M +++ +++ +++ G + G G +++LF ML E++ P++V FT IL+ACS G
Sbjct: 378 YLFEKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAG 437
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EGW F M + VPS+ HY C+VDLL+R+GRL+EA E ++++P++ +GA
Sbjct: 438 LVDEGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGAL 497
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C LY +L EV+ +++E+ P+ A YVL+SN+YA+ RW+ V+ VR M +RGL
Sbjct: 498 LGACKLYCDSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLR 557
Query: 667 KSPGCSLV 674
K PGCS +
Sbjct: 558 KIPGCSWI 565
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 249/519 (47%), Gaps = 48/519 (9%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
LL LCK+ L HA LI GL D T+ +S S H+ Y+ SVFD + +P +
Sbjct: 35 LLKLCKTHIDLHQVHAHLIQKGLEQDSFLVTQFISASNSVAHISYSTSVFDRVLSPSTFL 94
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ ++ Y + DI+ Y M++ D + F +LK C + EGM +H I+
Sbjct: 95 WNSLVSGYCAKLQFVDIISLYVRMKREDGAPDRYTFPSLLKVCASEGKMMEGMALHGSIL 154
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
+ G D +V T LV++Y K I +R+VFD ++NVVSWT+MI GY E
Sbjct: 155 RCGVDEDIYVTTSLVNLYGKGGLIDCARKVFDGMSERNVVSWTAMIVGYSSIGNLVEAKR 214
Query: 233 LFNRMREGFVE------GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
LF+ M E V G + +G + +A + E N T
Sbjct: 215 LFDLMPERNVASWNAIIGGYMKMGDVKSAEKAFDEMP--------------EKNVVSFTT 260
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
++D Y K G++ AR++F + D+++W+A+I GYTQ+G P++A+K F + + P+
Sbjct: 261 MIDGYAKAGDMLSARNLFQKAPERDIIAWSALISGYTQNGQPNEAVKTFLEMSSRNVKPD 320
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIF 404
+ S++ A +QLGNL++ + V S R + L V AL+DM AKC + A Y+F
Sbjct: 321 KFVLTSLMLACSQLGNLDLAKWVDSYATRCSVDLRGAHVTAALIDMNAKCGNMERAMYLF 380
Query: 405 ETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQ 447
E ++D+I++ S++ GL ++++PD V +++AC+ G V
Sbjct: 381 EKMPKRDLISYCSVMQGLSIHGHGDQAVSLFERMLGEDLTPDDVAFTVILTACSRAGLVD 440
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGG 506
G + + +V +++ ++ G + A ++ + + W A++G
Sbjct: 441 EGWHYFEMMRCKYSMVPSVDHYACIVDLLSRSGRLKEAYELIKSVPVQSHAGAWGALLGA 500
Query: 507 YGMQGDGGGSLALFSDMLNEEVQP----NEVIFTTILSA 541
+ D + + S ++ E++P N V+ + I +A
Sbjct: 501 CKLYCDSELAEVVASRLI--EIEPENAGNYVLLSNIYAA 537
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 178/472 (37%), Positives = 272/472 (57%), Gaps = 27/472 (5%)
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ L LF RM + + TL L+ A A+ + H + ++G++ + H V +L
Sbjct: 98 RTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSAHALLCRLGLQAHDHTVHSL 157
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPN 346
+ MY G+ AR VFD + D+VSW AM+ Y ++G ++F D PN
Sbjct: 158 VTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPN 217
Query: 347 HVTIASVLSASAQLGNLNMGRM----VHSLGIRLGLEDYTVINALVDMYAKCHVIADARY 402
VT+A VL+A G+L +GR V S I +G V +ALV MY KC + +AR
Sbjct: 218 EVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVG---SLVGSALVGMYEKCGEMTEARR 274
Query: 403 IFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGA 445
+F+ + KDV+AWN++I+G N SPD +TLV V+SACA++GA
Sbjct: 275 VFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGA 334
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+++G+ L AY++ +GL NVYVGTAL++ Y+KCGD A VF + KN TW+A+I
Sbjct: 335 LELGTELDAYASHRGLYG-NVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALIC 393
Query: 506 GYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
G G G ++ F M NEE ++P+++ F +LSAC H G++ +G + F S+ +F+
Sbjct: 394 GLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWFNSLTSEFQI 453
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
+P ++HY CMVDLLARAG LEEA +F+E +P + D + GA L C ++ E +I
Sbjct: 454 IPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGALLAACRKCKNVEVSERVIN 513
Query: 625 KMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++++L P + YV+ S +YAS R ++R LM++RG+SK PGCS V++
Sbjct: 514 RIMQLEPSNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVSKIPGCSWVEV 565
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 142/483 (29%), Positives = 221/483 (45%), Gaps = 48/483 (9%)
Query: 19 LQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAF----HALLIV 74
+ LRFF+ T +T + L A+ P L L L + F HALL
Sbjct: 87 VTLRFFASTRPRTALRLFLRMLRAALR--PDAYTLPFLLLAAARAPEPPFARSAHALLCR 144
Query: 75 DGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEF 133
GL +D LV+MY + G AR VFD +P D S+ M++ Y + D+
Sbjct: 145 LGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARM 204
Query: 134 YKCMRKRLKEHDNFV-FSKVLKACCELRDIDEGMK----VHCEIVKVGGPDSFVLTGLVD 188
++ M N V + VL AC + D+ G V ++VG S V + LV
Sbjct: 205 FRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVG---SLVGSALVG 261
Query: 189 MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT 248
MY KC ++ +R+VFD K+VV+W +MI GY QN ++E + LF+ MR+ ++IT
Sbjct: 262 MYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKIT 321
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L +++ACA + AL G L Y G+ N ++ TAL+DMY KCG++ A VF +L
Sbjct: 322 LVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLP 381
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGR 367
+ +W A+I G +G +A++ F + + P+ +T VLSA G L GR
Sbjct: 382 CKNEATWNALICGLAFNGRGHEAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGR 441
Query: 368 -----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+ I +E Y+ +VD+ A+ + +A E K
Sbjct: 442 RWFNSLTSEFQIIPKIEHYSC---MVDLLARAGHLEEAWDFVEKIPGK------------ 486
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGS-------SLHAYSTKQGLLSSNVYVGTALLNF 475
DAV L ++++AC V+V L ++ ++SS +Y + L+
Sbjct: 487 -----ADAVMLGALLAACRKCKNVEVSERVINRIMQLEPSNSWNYVVSSKIYASSDRLDD 541
Query: 476 YAK 478
AK
Sbjct: 542 SAK 544
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/495 (34%), Positives = 276/495 (55%), Gaps = 20/495 (4%)
Query: 202 VFDET-LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
VF +T + N + +MI G V D + L+ M + + + T ++ ACA+L
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
H G +H + K G + + + T ++ Y KCG +RDA VFD++ ++VSWT MI
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMIC 178
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-E 379
G + G +A+ LF + P+ I VL A A+LG+L GR + GL
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSR 238
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
+ V +LVDMY KC + +AR++F+ EKD++ W+++I G N
Sbjct: 239 NVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMR 298
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V PD +V +S+CASLGA+++G+ + LS+ V +GT+L++FYAKCG
Sbjct: 299 KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPV-LGTSLIDFYAKCGSM 357
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ A V+ M+EK+ V ++A+I G M G G + +F M + PNE F +L C
Sbjct: 358 EEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGC 417
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H G+V +G F SM DF P+++HY CMVDLLARAG L+EA ++ MP++ +V +
Sbjct: 418 THAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIV 477
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+G+ L GC L+ L E ++K+++EL P + +YVL+SN+Y++ RW ++R + +
Sbjct: 478 WGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNE 537
Query: 663 RGLSKSPGCSLVDLD 677
+G+ K PG S V++D
Sbjct: 538 KGMQKLPGYSWVEVD 552
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 217/449 (48%), Gaps = 21/449 (4%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMP-NPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
ND + L S + +Y VF P N + + + MIR D + + V Y M
Sbjct: 36 NDLLSIILRSTINFSNNAQYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASM 95
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
K D+F FS VLKAC L G+ +H + K G D FV T +V Y+KC +
Sbjct: 96 HKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFL 155
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ +VFD+ + KNVVSWT MI G ++ +E + LF + E + + + ++ AC
Sbjct: 156 RDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRAC 215
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A+L L G+W+ + + G+ N + T+L+DMY KCG++ +AR VFD + D+V W+
Sbjct: 216 ARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWS 275
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL-GIR 375
AMI GY +G P +A++LF + + + P+ + LS+ A LG L +G L
Sbjct: 276 AMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYE 335
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
L + + +L+D YAKC + +A +++ EKD + +N++ISGL
Sbjct: 336 EFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVF 395
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ P+ T V ++ C G V G + ++ + +++ A+
Sbjct: 396 GQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLAR 455
Query: 479 CGDAQSARMVFDAMREK-NTVTWSAMIGG 506
G A + M K N + W +++GG
Sbjct: 456 AGFLDEAHNLIKGMPMKANVIVWGSLLGG 484
>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
Length = 815
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 189/611 (30%), Positives = 312/611 (51%), Gaps = 22/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++S Y G++ AR +FD ++ MI Y ++ + D + + M + + D
Sbjct: 80 IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +L C +L E + H +IVK+G + V L+D Y K + S+R++F
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFL 199
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E + VS+ MI GY N +E + LF M+ + + T ++++A L
Sbjct: 200 EMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAF 259
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HG+++K N + A LD Y K + + R +F+E+ +D VS+ +I Y
Sbjct: 260 GQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIITAYAW 319
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIRLGLEDYTV 383
G +++ LF + ++ F + ++LS +A +L MGR +H+ + + + D+ V
Sbjct: 320 VGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRV 379
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDN------------V 426
N+LVDMYAKC +A IF S + + W ++IS GL +N V
Sbjct: 380 SNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANV 439
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
S D T V+ A A+L ++ +G LH+ + G + NVY G ALL+ YA C + A
Sbjct: 440 SADQATFACVLKASANLASILLGKQLHSCVIRSGFM--NVYSGCALLDMYANCASIKDAI 497
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F+ M E+N VTW+A++ Y GDG G+L F +M+ QP+ V F IL+ACSH
Sbjct: 498 KTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCR 557
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG K F M + P +HY MVD L R+GR +EA + M MP EPD ++ +
Sbjct: 558 LVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSV 617
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L+ C ++ + L ++ + + A YV +SN++A G+W V +V++ M+ RG+
Sbjct: 618 LNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAMRDRGV 677
Query: 666 SKSPGCSLVDL 676
K P S V++
Sbjct: 678 RKLPAYSWVEI 688
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/501 (25%), Positives = 231/501 (46%), Gaps = 60/501 (11%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
+SF + ++ Y K ++ +R++FD+T ++ VV+WT+MI Y +++ + LF M
Sbjct: 73 NSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMH 132
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ + +T +L+T C L + H I+K+G +N + LLD Y K G +
Sbjct: 133 RSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLD 192
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
AR +F E+C D VS+ MI GY +G ++A++LF + + F P+ T A+V+SAS
Sbjct: 193 SARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASV 252
Query: 359 QLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
L + G+ +H ++ + + V NA +D Y+K + + R +F E D +++N
Sbjct: 253 GLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNV 312
Query: 418 IISG---------------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
II+ D P +++S AS +Q+G LHA
Sbjct: 313 IITAYAWVGKVKESIDLFQELQFTTFDRKNFP----FPTMLSIAASSLDLQMGRQLHA-Q 367
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
+ + V +L++ YAKCG + A +F + ++TV W+AMI +G
Sbjct: 368 VVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHENG 427
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWKCFYSMCRDFKFV 565
L LF +M V ++ F +L A + H+ ++ G+ YS C
Sbjct: 428 LKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSGC------ 481
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
++D+ A +++A++ E M E +V + A L Y++ G+ +K
Sbjct: 482 -------ALLDMYANCASIKDAIKTFEEMS-ERNVVTWNALLSA---YAQNGDGKGTLKS 530
Query: 626 MLEL-----HPDKACYYVLVS 641
E+ PD + +++
Sbjct: 531 FEEMIMSGYQPDSVSFLCILT 551
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 154/584 (26%), Positives = 257/584 (44%), Gaps = 69/584 (11%)
Query: 41 FASFHSLPSIP----CLNLLGLCKSTGSLKAF---HALLIVDG--LTNDKCNTKLVSMYG 91
FA H S P + LL C K HA ++ G L + CNT L+ Y
Sbjct: 128 FAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNT-LLDSYF 186
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
G + AR +F M D SF VMI Y N L ++ +E + M+ + +F F+
Sbjct: 187 KTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAA 246
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
V+ A L D G ++H +VK + FV +D Y+K + R++F+E + +
Sbjct: 247 VISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELD 306
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
VS+ +I Y +E + LF ++ + ++++ A L G+ LH
Sbjct: 307 GVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHA 366
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
++ + + + +L+DMY KCG +A +F L S V WTAMI Q G +
Sbjct: 367 QVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLHEN 426
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDM 390
LKLF + + A+ + T A VL ASA L ++ +G+ +HS IR G + AL+DM
Sbjct: 427 GLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNVYSGCALLDM 486
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTL 433
YA C I DA FE SE++V+ WN+++S N PD+V+
Sbjct: 487 YANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSF 546
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+ +++AC+ H ++GL N G + N K R
Sbjct: 547 LCILTACS-----------HCRLVEEGLKYFNDMSG--VYNLAPK--------------R 579
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC---SHTGMVGE 550
E ++AM+ G + L M +P+E+++T++L++C + + +
Sbjct: 580 EH----YTAMVDALCRSGRFDEAEKLMGQM---PFEPDEIVWTSVLNSCRIHKNYALARK 632
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
++M K + YV M ++ A AG+ + ++ + M
Sbjct: 633 AAGQLFNM----KVLRDAAPYVTMSNIFAEAGQWDSVVKVKKAM 672
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 20/154 (12%)
Query: 451 SLHAYSTKQGLLS----SNVYVG----TALLNFYAK----CGDAQSARMVFDAMREKNTV 498
+LH S++Q L + V G T+ NF K G AR + D M +N+
Sbjct: 16 TLHGASSRQTLQTCIDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNSF 75
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
+ +I GY G+ + +F D V V +TT++ A S + G+ +K F M
Sbjct: 76 SIDIIISGYVKSGNLTVARRIFDDTDERTV----VAWTTMIGAYSKSNRFGDAFKLFAEM 131
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
R S YV + LL LE A E +
Sbjct: 132 HRS----GSQPDYVTYITLLTGCNDLEVAKELYQ 161
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 195/581 (33%), Positives = 295/581 (50%), Gaps = 55/581 (9%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F +LK C RD+ G +H +K P ++ + +Y+KC + +R+ F +
Sbjct: 11 FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70
Query: 208 DKNVVSWTSMIAGYVQN-----------------------------DCAQ--EGLVLFNR 236
D NV S+ ++IA Y + DC + L LF+
Sbjct: 71 DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
MRE ++ + TL +++TAC L G+ LH + G + + ALL Y K G+
Sbjct: 131 MREMGLDMDGFTLSAVITACCDDVGL-IGQ-LHSVAVSSGFDSYVSVNNALLTYYGKNGD 188
Query: 297 IRDARSVFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+ DA+ VF + I D VSW +MIV Y Q KAL LF + + T+ASVL+
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248
Query: 356 ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHV-IADARYIFETTSEKDVI 413
A L +L+ G H I+ G ++ V + L+D+Y+KC ++D R +FE +E D++
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308
Query: 414 AWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAY 455
WN+++SG N P+ + V VISAC++L + G +H+
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
+ K + S+ + V AL+ Y+KCG+ Q AR +FD M E NTV+ ++MI GY G
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
SL LF ML ++ P + F ++LSAC+HTG V EGW F M F P +HY CM+
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DLL RAG+L EA + MP P + + L C + +L ++L+L P A
Sbjct: 489 DLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAA 548
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YV++SN+YAS GRW V VR+ M+ RG+ K PGCS +++
Sbjct: 549 PYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIEV 589
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/457 (28%), Positives = 225/457 (49%), Gaps = 38/457 (8%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++ Y A +FD +P PD S+ +I Y + + MR+ + D
Sbjct: 80 IIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMD 139
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKV-GGPDSFVL--TGLVDMYAKCRDIGSSRQV 202
F S V+ ACC+ D G+ V V G DS+V L+ Y K D+ +++V
Sbjct: 140 GFTLSAVITACCD----DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRV 195
Query: 203 FDETLD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
F ++ VSW SMI Y Q+ + L LF M + + TL S++TA L
Sbjct: 196 FYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLED 255
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMIV 320
L G HG ++K G NSH+ + L+D+Y KC G + D R VF+E+ DLV W M+
Sbjct: 256 LSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVS 315
Query: 321 GYTQS-GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY+Q+ + + AL+ F + + PN + V+SA + L + + G+ +HSL ++ +
Sbjct: 316 GYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIP 375
Query: 380 D--YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
+V NAL+ MY+KC + DAR +F+ +E + ++ NS+I+G
Sbjct: 376 SNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQW 435
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L+ ++P ++T +SV+SACA G V+ G + ++ + + +++ + G
Sbjct: 436 MLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAG 495
Query: 481 ---DAQS--ARMVFDAMREKNTVTWSAMIGGYGMQGD 512
+A++ ARM F+ ++ W++++G G+
Sbjct: 496 KLSEAENLIARMPFNP----GSIGWASLLGACRTHGN 528
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
C NL S K H+L + + +++ + L++MY G+++ AR +FD M
Sbjct: 353 CSNL----SSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ S MI Y + + + + ++ M +R + F VL AC ++EG
Sbjct: 409 NTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEG 464
>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
Length = 806
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 194/636 (30%), Positives = 327/636 (51%), Gaps = 31/636 (4%)
Query: 57 GLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQV 116
G K ++ H + N + LV+MY G + A + FD +
Sbjct: 162 GRIKDLAQGRSIHYRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNA 221
Query: 117 MIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI-VK 174
++ ++ +E F++ + + + + A LR G+++H +I +
Sbjct: 222 IMSALAGAGHHRRAIELFFQMEQHQCSDRSCAIALGACAAAGHLRG---GIQIHDKIQSE 278
Query: 175 VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
+ G VL L+ MY +C + + +VF + +NVVSWTSMIA Q + LF
Sbjct: 279 IHGTRVLVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLF 338
Query: 235 NRMREGFVEGNQITLGSLVTACAKL---RALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
+ M + N+ T S+V+A A L L +G+ +H I GI+ + + +L++MY
Sbjct: 339 DGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMY 398
Query: 292 VKCGNIRDARSVFDELC--SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+ G + +AR VFD + S +VS+T MI Y +G+P +AL++F + PN +T
Sbjct: 399 ARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEIT 458
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE--DYTVINALVDMYAKCHVIADARYIFETT 407
A+VL+A +G+L G +H I GL+ D N+LVDMYAKC + A +FET
Sbjct: 459 FATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETM 518
Query: 408 SEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGS 450
KD++AW +II+ L + PD TL +++ ACA+LG + +G
Sbjct: 519 KTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGE 578
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+H + + L + + AL YAKCG + A ++ R + TW++M+ + Q
Sbjct: 579 KIHRQALRSKL-EQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQ 637
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G +L L+++M +E V+PNEV F +L +CS G+V EG + F+S+ D+ PS +H
Sbjct: 638 GLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEH 697
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
+ CMVD+L RAG+L +A E +++MP PD + + L C L++ ++G + +LEL
Sbjct: 698 FGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAEIGTRAAECLLELD 757
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQV-RELMKQRGL 665
P+ +V +S +YA+ GR ++++ REL +R +
Sbjct: 758 PESTSQFVALSQIYAAAGRNSDIDEIKRELALRRQI 793
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 276/564 (48%), Gaps = 36/564 (6%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLV-SMYGSFGHVKYARSVFDSMPNP 109
NLL C + +L + HA ++ L + +LV MY A ++FD+MP+
Sbjct: 55 NLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDR 114
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ + V+++ + D +D +E Y+ M + F + AC ++D+ +G +H
Sbjct: 115 RPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH 174
Query: 170 CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+ G +S + + LV MYA+C I + FD+ + W ++++ +
Sbjct: 175 YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRR 234
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV---TA 286
+ LF +M + + + + + ACA L G +H KI EI+ V A
Sbjct: 235 AIELFFQMEQH--QCSDRSCAIALGACAAAGHLRGGIQIHD---KIQSEIHGTRVLVLNA 289
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ MYV+CG + +A VF ++ ++VSWT+MI Q+G+ ++KLF PN
Sbjct: 290 LISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPN 349
Query: 347 HVTIASVLSASAQLGN---LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
T ASV+SA A LG L+ GR +HS G++ D V N+L++MYA+ ++A+AR
Sbjct: 350 EKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEARE 409
Query: 403 IFETTSE--KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASL 443
+F++ E K V+++ ++IS N V+P+ +T +V++AC ++
Sbjct: 410 VFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAI 469
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G + G+ +H + GL SS+ + +L++ YAKCGD A VF+ M+ K+ V W+ +
Sbjct: 470 GDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTI 529
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I G+ +L L+ ML + P+ +T+L AC++ G + G K R K
Sbjct: 530 IAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRS-K 588
Query: 564 FVPSMKHYVCMVDLLARAGRLEEA 587
+ + A+ G LE+A
Sbjct: 589 LEQDAHFQNALAAMYAKCGSLEKA 612
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/521 (26%), Positives = 242/521 (46%), Gaps = 33/521 (6%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLV-DMYAKCRDIGSSRQVFDE 205
+++ +L+ C R +D G +VH IV + +L LV MYA+CR ++ +FD
Sbjct: 51 LLYANLLRQCGNQRALDHGRRVHAHIVSRRLARNALLGELVFQMYARCRCFDTAIALFDA 110
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
D+ W ++ ++ D ++ L L+ RM + + + AC +++ L QG
Sbjct: 111 MPDRRPFCWNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQG 170
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ +H Y + G INS + +AL+ MY +CG I A + FD+ + W A++ +
Sbjct: 171 RSIH-YRVATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGA 229
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH-SLGIRLGLEDYTVI 384
G+ +A++LF + + + A L A A G+L G +H + + V+
Sbjct: 230 GHHRRAIELFFQMEQHQC--SDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVL 287
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVS 427
NAL+ MY +C + +A +F ++V++W S+I+ + + ++
Sbjct: 288 NALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGIN 347
Query: 428 PDAVTLVSVISACASLGAVQV---GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
P+ T SV+SA A LG + G +H+ T G + ++ V +L+N YA+ G
Sbjct: 348 PNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASG-IDADPIVQNSLINMYARSGLLAE 406
Query: 485 ARMVFDAMRE--KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
AR VFD++ E K V+++ MI Y G +L +F +M V PNE+ F T+L+AC
Sbjct: 407 AREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAAC 466
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV-- 600
G + G M Y +VD+ A+ G L A E M + V
Sbjct: 467 VAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAW 526
Query: 601 -SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
++ A + + DL + M++ +HPD A L+
Sbjct: 527 TTIIAANVQSGNNRAALDLYDRMLQS--GIHPDIATLSTLL 565
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 175/529 (33%), Positives = 292/529 (55%), Gaps = 20/529 (3%)
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H ++++G D+++L ++ + S ++ D+T + N+ + +MI G V NDC
Sbjct: 29 IHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDC 88
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
QE + +++ MR+ + + T ++ ACA++ G +H ++K G E ++ + +
Sbjct: 89 FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKIS 148
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+++Y KCG I +A VFD++ + SWTA I GY G +A+ +F P+
Sbjct: 149 LINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPD 208
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFE 405
++ VLSA + G+L G + G+ + V ALVD Y KC + AR +F+
Sbjct: 209 SFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFD 268
Query: 406 TTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQV 448
EK++++W+S+I G L++ + PD +V V+ +CA LGA+++
Sbjct: 269 GMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G L ++V +GTAL++ YAKCG A VF MR+K+ V W+A I G
Sbjct: 329 GDWASNLINGNEFLDNSV-LGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLA 387
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
M G +L LF M ++P+ F +L AC+H G+V EG + F SM F P +
Sbjct: 388 MSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEI 447
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY CMVDLL RAG L+EA + +++MP+E + ++GA L GC L+ L EV++KK++
Sbjct: 448 EHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIA 507
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
L P + YVL+SN+YA+ +W ++R +M +RG+ K PG S +++D
Sbjct: 508 LEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVD 556
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 153/469 (32%), Positives = 237/469 (50%), Gaps = 21/469 (4%)
Query: 65 LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
LK HA L+ GL D K++ +FG+ Y+ + D P+ + F MIR L
Sbjct: 26 LKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVL 85
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
ND +++ +E Y MRK D+F F VLKAC + D + G+K+H +VK G D+FV
Sbjct: 86 NDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFV 145
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
L+++Y KC I ++ +VFD+ DKN SWT+ I+GYV +E + +F R+ E +
Sbjct: 146 KISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGL 205
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ +L +++AC + L G+W+ YI + G+ N + TAL+D Y KCGN+ ARS
Sbjct: 206 RPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARS 265
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VFD + ++VSW++MI GY +G P +AL LF P+ + VL + A+LG
Sbjct: 266 VFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGA 325
Query: 363 LNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L +G +L D +V+ AL+DMYAKC + A +F +KD + WN+ ISG
Sbjct: 326 LELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISG 385
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
L + PD T V ++ AC G V+ G L+
Sbjct: 386 LAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTP 445
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGD 512
+ +++ + G A + +M E N + W A++GG + D
Sbjct: 446 EIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRD 494
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/542 (33%), Positives = 293/542 (54%), Gaps = 24/542 (4%)
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRD 195
M R + +N++ +L+AC + + + E K+H +K DS VL L +Y C
Sbjct: 1 MPLRFEVKNNYL--HLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQ 58
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+ +R++FDE + +V+ W +I Y N + L++ M V N+ T ++ A
Sbjct: 59 VVLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKA 118
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C+ L A+ G +H + G+E + + TAL+D Y KCG + +A+ +F + D+V+W
Sbjct: 119 CSGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAW 178
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
AMI G + G D A++L + PN TI VL L L ++ +G+R
Sbjct: 179 NAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL--LYARKIFDVMGVR 236
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVS 435
+ +A++ Y + +A IF +SG+D PD T++
Sbjct: 237 ----NEVSWSAMIGGYVASDCMKEALDIFRMMQ----------LSGID----PDLTTMLG 278
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
V+ AC+ L A+Q G H Y +G +++ + AL++ Y+KCG AR VF+ M
Sbjct: 279 VLPACSHLAALQHGFCSHGYLIVRGF-ATDTLICNALIDMYSKCGKISFAREVFNRMDRH 337
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
+ V+W+AMI GYG+ G G +L LF D+L ++P+++ F +LS+CSH+G+V EG F
Sbjct: 338 DIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWF 397
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+M RDF VP M+H +CMVD+L RAG ++EA F+ NMP EPDV ++ A L C ++
Sbjct: 398 DAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKN 457
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+LGE + KK+ L P+ +VL+SN+Y++ GRW +R K GL K PGCS ++
Sbjct: 458 IELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIE 517
Query: 676 LD 677
++
Sbjct: 518 IN 519
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 217/515 (42%), Gaps = 64/515 (12%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNT-KLVSMYGSFGHVKYARSVFDSMPN 108
L+LL C + SL K H + + D KL +Y S V AR +FD +PN
Sbjct: 12 LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
P + +IR Y N + ++ Y M + + + VLKAC L I++G+++
Sbjct: 72 PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H G D FV T LVD YAKC + ++++F ++VV+W +MIAG
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ + L +M+E + N T+ ++ C L
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL---------------------------- 223
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+Y AR +FD + + VSW+AMI GY S +AL +F + + P+
Sbjct: 224 --LY--------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDL 273
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFET 406
T+ VL A + L L G H I G T+I NAL+DMY+KC I+ AR +F
Sbjct: 274 TTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR 333
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
D+++WN++I G L + PD +T + ++S+C+ G V G
Sbjct: 334 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 393
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYG 508
++ + + +++ + G A M E + WSA++
Sbjct: 394 RLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 453
Query: 509 MQG--DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ + G ++ L E N V+ + I SA
Sbjct: 454 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSA 488
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 177/538 (32%), Positives = 299/538 (55%), Gaps = 30/538 (5%)
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H I+ +G +S + T L+ YA C+ SR VFD KNV W S+I GY +N
Sbjct: 46 HSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLY 105
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E LFN+M V + TL +L ++L AL GK +HG ++IG ++ + ++
Sbjct: 106 NEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSI 165
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG---YPDKALKLFTDKKWADFF 344
+ MY KCGN ++R VFDE+ + SW +I GY SG + ++ + + +
Sbjct: 166 MSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVR 225
Query: 345 PNHVTIASVLS-ASAQLGNLNMGRMVHSLGIR----LGLE-DYTVINALVDMYAKCHVIA 398
P+ TI+S+L G + GR +H ++ LGL+ D + L+DMY++ + +
Sbjct: 226 PDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVV 285
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISAC 440
R +F+ ++V +W ++I+G +N + P+ V+LVSV+ AC
Sbjct: 286 VGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPAC 345
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF-DAMREKNTVT 499
+S + G +H ++ ++ L ++ V + AL++ Y+KCG SAR VF D K+ ++
Sbjct: 346 SSFSGLLSGRQIHGFAVRKEL-NNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAIS 404
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
WS+MI GYG+ G G ++ L+ ML ++P+ + ILSACS +G+V EG + S+
Sbjct: 405 WSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVI 464
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
D+ P+++ + C+VD+L RAG+L+ AL+F++ MP+EP S++GA + ++ ++
Sbjct: 465 NDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQ 524
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
E+ + +++L P+ YV +SNLYAS RW V +VR +MK + L K PGCS + ++
Sbjct: 525 ELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISIN 582
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/509 (30%), Positives = 246/509 (48%), Gaps = 42/509 (8%)
Query: 42 ASFHSLPSIPCLNLLGLCKSTGSLK---AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVK 97
++F PS+ L L + SLK H+ ++ GL+ N TKL+ Y H
Sbjct: 16 SAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPY 75
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
++R VFDS+ + + + + +I Y N LY + + + M D+F S + K
Sbjct: 76 HSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSS 135
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
EL + G +H + +++G D+ V ++ MY KC + SR+VFDE +N SW
Sbjct: 136 ELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNV 195
Query: 217 MIAGY-VQNDC--AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW-----L 268
+IAGY V +C +E +M+ V + T+ SL+ C +GKW L
Sbjct: 196 LIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDG----DKGKWDYGREL 251
Query: 269 HGYILK----IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
H YI+K +G++ + HL L+DMY + + R VFD + ++ SWTAMI GY +
Sbjct: 252 HCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVE 311
Query: 325 SGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYT 382
+G D+AL LF D + D PN V++ SVL A + L GR +H +R L + +
Sbjct: 312 NGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVS 371
Query: 383 VINALVDMYAKCHVIADARYIFETTSE-KDVIAWNSIISG-----------------LDD 424
+ NAL+DMY+KC + AR +FE S KD I+W+S+ISG L
Sbjct: 372 LCNALIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQA 431
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ PD +T V ++SAC+ G V G ++++ + + + +++ + G
Sbjct: 432 GIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDP 491
Query: 485 ARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
A AM E W A++ + GD
Sbjct: 492 ALDFIKAMPVEPGPSVWGALVSCSIIHGD 520
>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 286/504 (56%), Gaps = 29/504 (5%)
Query: 202 VFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+F+ +DK +V SW S+IA ++ + E L F+ MR+ + + + + AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ GK H G + + + +AL+ MY CG + DAR VFDE+ ++VSWT+MI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 321 GYTQSGYPDKALKLFTD------KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
GY +G A+ LF D A F + + + SV+SA +++ + +HS I
Sbjct: 151 GYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210
Query: 375 RLGLE-DYTVINALVDMYAKCHV--IADARYIFETTSEKDVIAWNSIIS-----GLDDN- 425
+ G + +V N L+D YAK +A AR IF+ +KD +++NSI+S G+ +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
V+ + +TL +V+ A + GA+++G +H + GL +V VGT+++
Sbjct: 271 FDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGL-EDDVIVGTSII 329
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y KCG ++AR+ FD M+ KN +W+AMI GYGM G +L LF M++ V+PN +
Sbjct: 330 DMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F ++L+ACSH G+ GW F +M F P ++HY CMVDLL RAG L++A + ++
Sbjct: 390 TFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQK 449
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M +EPD ++ + L C ++ +L E+ + ++ EL P YY+L+S++YA GRW V
Sbjct: 450 MKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDV 509
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+VR MK RGL K PG SL++L+
Sbjct: 510 ERVRMTMKNRGLVKPPGFSLLELN 533
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 201/393 (51%), Gaps = 41/393 (10%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F +KAC L DI G + H + G D FV + L+ MY+ C + +R+VFDE
Sbjct: 79 FPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN---------QITLGSLVTACAK 258
+N+VSWTSMI GY N A + + LF + +E N + + S+++AC++
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDL---LIEENDDDATMFLDSMGMVSVISACSR 195
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN--IRDARSVFDELCSIDLVSWT 316
+ A + +H +++K G + + LLD Y K G + AR +FD++ D VS+
Sbjct: 196 VAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 317 AMIVGYTQSGYPDKALKLF---TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
+++ Y QSG ++A +F +K F N +T+++VL A + G L +G+ +H
Sbjct: 256 SIMSVYAQSGMSNEAFDVFRRLIKEKVVTF--NCITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 374 IRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------- 421
IR+GLED ++ +++DMY KC + AR F+ K+V +W ++I+G
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 422 ------LDDNVSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLSSNVYVGTALLN 474
+D V P+ +T VSV++AC+ G VG +A + G+ + G +++
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYG-CMVD 432
Query: 475 FYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ G Q A + M+ E +++ WS+++
Sbjct: 433 LLGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAA 465
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/452 (29%), Positives = 217/452 (48%), Gaps = 44/452 (9%)
Query: 8 QRHVSRTKKPKLQLRFFSYTN-----------QQTPTQHELDQTFASFHSLP------SI 50
+RH R L R+ T+ ++ E + F+S L S
Sbjct: 20 ERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSF 79
Query: 51 PCLNLLGLCKS---TGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSM 106
PC + C S S K H V G +D ++ L+ MY + G ++ AR VFD +
Sbjct: 80 PCA--IKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI 137
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF------SKVLKACCELR 160
P + S+ MIR Y LN D V +K + + D +F V+ AC +
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVA 197
Query: 161 DIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRD--IGSSRQVFDETLDKNVVSWTS 216
+H ++K G D V G L+D YAK + + +R++FD+ +DK+ VS+ S
Sbjct: 198 AKGLTESIHSFVIK-RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 217 MIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
+++ Y Q+ + E +F R+ +E V N ITL +++ A + AL GK +H ++++
Sbjct: 257 IMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G+E + + T+++DMY KCG + AR FD + + ++ SWTAMI GY G+ KAL+LF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDM 390
+ PN++T SVL+A + G ++G M G+ GLE Y +VD+
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHY---GCMVDL 433
Query: 391 YAKCHVIADARYIFETTS-EKDVIAWNSIISG 421
+ + A + + E D I W+S+++
Sbjct: 434 LGRAGFLQKAYDLIQKMKMEPDSIIWSSLLAA 465
>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 684
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 291/532 (54%), Gaps = 23/532 (4%)
Query: 165 GMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G +H I++ V SF+ LV+MY+K + S++ V T + VV+WTS+I+G V
Sbjct: 25 GRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCV 84
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
N L+ F MR V+ N T + A A ++ GK +HG LK G+ +
Sbjct: 85 HNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVF 144
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ + DMY K G DA ++FDE+ +L +W A I Q A+ F +
Sbjct: 145 VGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVH 204
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADAR 401
PN +T + L+A + LN+GR +H+ +R G ED +V N L+D Y KC I A
Sbjct: 205 GEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAE 264
Query: 402 YIFETT-SEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLG 444
+F + K+V++W S+++ L N V P + SV+SACA LG
Sbjct: 265 MVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELG 324
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+++G S+HA + K + N++VG+AL++ Y KCG ++A VF + E+N VTW+AMI
Sbjct: 325 GLELGRSVHALAVK-ACVEDNIFVGSALVDMYGKCGSIENAEQVFSELPERNLVTWNAMI 383
Query: 505 GGYGMQGDGGGSLALFSDML--NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
GGY QGD +L LF +M + ++P+ V +ILS CS G V G + F SM ++
Sbjct: 384 GGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNY 443
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P +H+ C+VDLL R+G ++ A EF++NM I+P +S++GA L C ++ + +LG++
Sbjct: 444 GIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIA 503
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+K+ EL + +V++SN+ AS GRW VR+ MK G+ K+ G S +
Sbjct: 504 AEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWI 555
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 158/360 (43%), Gaps = 33/360 (9%)
Query: 25 SYTNQQTPTQHELD-----QTFASFHSLP-SIPCLNLLGLCKSTGSL---KAFHALLIVD 75
+Y + + LD + F H P SI L C L + HA ++
Sbjct: 179 AYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRC 238
Query: 76 GLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW-YFLNDLYKDIVEF 133
G D L+ YG G + A VF+ + N + ++ W L L ++ E
Sbjct: 239 GYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNR-----KNVVSWCSMLAALVQNHEEE 293
Query: 134 YKCM-----RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLV 187
CM RK ++ D F+ S VL AC EL ++ G VH VK D+ FV + LV
Sbjct: 294 RACMVFLQARKEVEPTD-FMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALV 352
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF--VEGN 245
DMY KC I ++ QVF E ++N+V+W +MI GY L LF M G + +
Sbjct: 353 DMYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPS 412
Query: 246 QITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+TL S+++ C+++ A+ +G + L GIE + ++D+ + G + A
Sbjct: 413 YVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFI 472
Query: 305 DELCSIDLVS-WTAMIVGYTQSGYPD----KALKLFTDKKWADFFPNHVTIASVLSASAQ 359
+ +S W A++ G + A KLF NHV ++++L+++ +
Sbjct: 473 QNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDS--GNHVVLSNMLASAGR 530
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
N+ P + L S++ + S +G ++HA+ + + ++ L+N Y+K S
Sbjct: 2 NIHPQNL-LGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNS 60
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A+ V + VTW+++I G +L F++M + VQPN+ F + A
Sbjct: 61 AQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKA 117
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/646 (29%), Positives = 337/646 (52%), Gaps = 25/646 (3%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
L C S L+ HA I+ G N ++KL+ Y + G + ++ VF S+ +P+
Sbjct: 33 LFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTL 92
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
F ++R + + Y+ M + D + VL++C ++ G +H +V
Sbjct: 93 FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152
Query: 174 KVGGPDSF--VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
K+G D F V T L +MY +C + ++ Q+FD+ K++ +S+ QND +
Sbjct: 153 KLGF-DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIF 211
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
+F RM + + T +L+ A L ++ K +H + + + + TA+L +Y
Sbjct: 212 RVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLY 271
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
K ++ DAR +FD++ D V W MI Y + G P + L+LF + + T
Sbjct: 272 SKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTAL 331
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
V+S+ AQL ++ G+ H+ +R G + +V N+L+DMY +C ++ A IF ++K
Sbjct: 332 PVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDK 391
Query: 411 DVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
VI+W+++I G D + D V +++++ A +GA++ LH
Sbjct: 392 SVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLH 451
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR--EKNTVTWSAMIGGYGMQG 511
YS K GL +S + TALL YAKCG + A+ +F+ + +K+ + W++MI + G
Sbjct: 452 GYSMKLGL-TSLPSLNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHG 510
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
D L++ M +P++V F +L+AC ++G+V +G + F M + PS +HY
Sbjct: 511 DWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHY 570
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CMV+LL RAG + EA E ++NMPI+PD ++G L C ++ L E +K++ + P
Sbjct: 571 ACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEP 630
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
A Y+L+SN+YA+ G+W V ++R ++ +GL K PGCS ++++
Sbjct: 631 RNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGCSWLEIN 676
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 24/333 (7%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TL L + C ++ L Q +H + G N L + L+D Y G + + VF +
Sbjct: 29 TLSLLFSRCNSIQHLQQ---IHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSV 85
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
+L + A++ T+ G ++ L ++ P+ T VL + + N+ GR
Sbjct: 86 IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 145
Query: 368 MVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
+H ++LG + + V+ AL +MY +C +A +F+ S KD + W S ++
Sbjct: 146 TIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKD-LGWPSSLTTEGPQN 204
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ + + PD+ T +++ A L ++Q+ +H + LS ++ V
Sbjct: 205 DNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSK-LSGDLLV 263
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
TA+L+ Y+K AR +FD M EK+ V W+ MI Y +G L LF M +
Sbjct: 264 NTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGI 323
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
+ + ++S+ + V G + + R+
Sbjct: 324 RSDLFTALPVISSIAQLKCVDWGKQTHAHILRN 356
>gi|302785790|ref|XP_002974666.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
gi|300157561|gb|EFJ24186.1| hypothetical protein SELMODRAFT_101 [Selaginella moellendorffii]
Length = 921
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 192/592 (32%), Positives = 304/592 (51%), Gaps = 30/592 (5%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
+D ++S++ G + R +FD MP+ ++ MI Y + +E Y CM
Sbjct: 335 DDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCMD 394
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
E D+ S VL+AC L+++++G VH I P V T LVDMY KC D+
Sbjct: 395 I---EPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLA 451
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+R+ FD ++V+SWTS+I Y + +E L +F+ M VE N IT +++ AC+
Sbjct: 452 EARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEGVEPNSITFCTVIDACS 511
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
+L +L G+ LH ++ G + + AL+ MY K G + AR VFD + SW
Sbjct: 512 RLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVDFARVVFDSIPVKRYPSWRV 571
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
M+V TQ+G+ +AL++++ F P ++ L + L +++ R +H + I+
Sbjct: 572 MLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARAIHGV-IKSS 630
Query: 378 --LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
D + N L+++YAKC + +AR +F+ +EK+ ++W ++I G N
Sbjct: 631 DFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVSWTTMIGGYAQNGRPAEALELY 690
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
V P+ + V VIS+CA LGA+ G +HA + GL ++ V V TAL+N YAKCG
Sbjct: 691 KAMDVQPNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIV-TALVNMYAKCGK 749
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
AR FD+ + W++M Y G G L L+ +M + VQPN + ++L A
Sbjct: 750 LGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQPNGITLLSVLVA 809
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD-- 599
CSH GM+ E F M D P+ +HY CM DLL R+GRLEEA + ++ E
Sbjct: 810 CSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEAEKVVKMASGESGSE 869
Query: 600 ------VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
VS + +FL C ++ + +K+ EL P+ + YVL+S Y+
Sbjct: 870 AASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYELDPEDSAPYVLLSQTYS 921
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 175/596 (29%), Positives = 291/596 (48%), Gaps = 37/596 (6%)
Query: 35 HELDQTFASFHSLPS-IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNT------KLV 87
E + F + PS I ++LG C S L+ A+ G ++ + LV
Sbjct: 82 QEALEAFRRMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGASSPQIQADEILQNSLV 141
Query: 88 SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDN 146
+MYG G ++ A VF + + +S+ MI Y N + +E F M + E D
Sbjct: 142 TMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDP 201
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
++ VL AC L D++ GM++H I G + V TGL+D+Y K + QVF+
Sbjct: 202 ITYAGVLTACSTLGDLETGMRIHALIRSKGVESAMVSTGLIDLYGKWGFFEDALQVFESV 261
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
D++VV WT+ IA V + + L LF +M ++ N +T ++ AC+ L GK
Sbjct: 262 RDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGLQANNVTFSKILAACSNLEDFETGK 321
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+ I +G+E + L +L ++ +CG++ R +FD + +V+WT MI Y Q G
Sbjct: 322 TIEDRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIAAYNQRG 381
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT---- 382
Y +AL+L+ D P+ + +++VL A ++L NL GR VHS R+ D+
Sbjct: 382 YSMEALELY---HCMDIEPDDIALSNVLQACSRLKNLEQGRAVHS---RIASRDFEPSLM 435
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DN 425
V LVDMY KC +A+AR F+ +DVI+W S+I+ +
Sbjct: 436 VQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSMELEG 495
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V P+++T +VI AC+ L ++ G +LH+ G +S +VG AL++ Y+K G A
Sbjct: 496 VEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDE-FVGNALVSMYSKFGRVDFA 554
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R+VFD++ K +W M+ G +L ++S + E +P IF+ L +C+
Sbjct: 555 RVVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTAL 614
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
V + + + + F P + ++++ A+ G LEEA + M + +VS
Sbjct: 615 EDVSRA-RAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEEARLVFDQMTEKNEVS 669
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/461 (30%), Positives = 233/461 (50%), Gaps = 29/461 (6%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ VL AC L+D++ G KVH I + V D+ + L+++YAKC D+ SR++F+
Sbjct: 1 TFACVLSACAGLKDMERGKKVHRRIRESVARVDTVLQNALLNLYAKCGDLEESRRIFEAM 60
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ V +W +MI YVQ+D QE L F RM + IT S++ AC L GK
Sbjct: 61 ERRTVATWNTMITAYVQHDFFQEALEAFRRMD---APPSSITFTSVLGACCSPDDLETGK 117
Query: 267 WLHGYILKIGIEINSH--LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+H I +I + L +L+ MY KCG++ DA VF + + SWTAMI Y Q
Sbjct: 118 AIHRQIGASSPQIQADEILQNSLVTMYGKCGSLEDAERVFHGIRRKNAFSWTAMITAYAQ 177
Query: 325 SGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
+GY +A+++F D P+ +T A VL+A + LG+L G +H+L G+E V
Sbjct: 178 NGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLETGMRIHALIRSKGVESAMV 237
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
L+D+Y K DA +FE+ ++DV+ W + I+ + +
Sbjct: 238 STGLIDLYGKWGFFEDALQVFESVRDRDVVIWTAFIAACVYHGQSGFALELFRKMEAEGL 297
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ VT +++AC++L + G ++ GL +V + +L+ +A+CG R
Sbjct: 298 QANNVTFSKILAACSNLEDFETGKTIEDRIYTLGLEYDDV-LQDGILSLHARCGSLVGTR 356
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+FD M + VTW+ MI Y +G +L L+ M +++P+++ + +L ACS
Sbjct: 357 EMFDRMPHRTVVTWTTMIAAYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLK 413
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ +G + +S F PS+ +VD+ + G L EA
Sbjct: 414 NLEQG-RAVHSRIASRDFEPSLMVQTLLVDMYVKCGDLAEA 453
>gi|147836510|emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
Length = 630
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 307/573 (53%), Gaps = 47/573 (8%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+ +VL +C RD+ G +H I+K G + FV L+DMYAKC I + ++F
Sbjct: 41 DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D DK VVSWTSM++G+ Q E + +F RM E ++ N+ TL ++ ACA+ R L
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQACAQKRDLK 159
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
+ +H +I+K G +++ L +L+D Y K G + A + L D+VSWT++I G
Sbjct: 160 LVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCV 219
Query: 324 QSGYPDKALKLFTDKKWADFFPN--------HVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+G +KAL F + + PN TIA++L + L +G +H I+
Sbjct: 220 LNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIK 279
Query: 376 LGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
G T++ N+L+ MYA+ A +F S +D+++WN++IS L
Sbjct: 280 HGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALML 339
Query: 423 ---------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
D + PD VT+++ I AC+SL ++Q+G +H Y T+ GL+ +++V +L+
Sbjct: 340 LSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLI-CDIFVQNSLV 398
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV-QPNE 532
+ Y KCG A V + M ++ +W+++I YG+ G+G +L +F + N +PN
Sbjct: 399 DMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNA 458
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
+ FT ILSAC+H G+V EG++ F SM R++ P ++H+ CM R E F++
Sbjct: 459 ITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACM--------RPE---AFIQ 507
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
MP EP ++GA L GCGL+ D+ E + KK+ L P + V +SN+YAS +W
Sbjct: 508 KMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKLXILEPKSRAWRVALSNVYASVNKWED 567
Query: 653 VNQVR-ELMKQRGLSKSPGCSLVDLDIANDFSF 684
+VR E+ + L K G S V++ +F F
Sbjct: 568 AAKVRAEMRRSEELQKEGGWSSVEVR-GZEFRF 599
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 139/522 (26%), Positives = 250/522 (47%), Gaps = 52/522 (9%)
Query: 30 QTPTQHELDQTFASFHSLP-SIPCLNLLGLCKSTGSLK---AFHALLIVDGL-TNDKCNT 84
+ P E + H+L S+ + +L C + L+ H ++ GL TN
Sbjct: 22 KQPRLAEPRDKYPHIHTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVAN 81
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
L+ MY G ++ A +FD MP+ S+ M+ + + +++ + M + L+ +
Sbjct: 82 SLMDMYAKCGRIEDAAKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLETLQPN 141
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVF 203
+ + + +L+AC + RD+ +HC I+K G D+F+ L+D Y K + ++ ++
Sbjct: 142 E-YTLAVILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLM 200
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN--------QITLGSLVTA 255
+ ++VVSWTS+I+G V N ++ L+ F M+E V N T+ +L+
Sbjct: 201 KRLICRDVVSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQG 260
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD--ARSVFDELCSIDLV 313
C+ + L G+ +HGY +K G + + +L+ MY + N RD A +F ++ D+V
Sbjct: 261 CSHSKCLKLGEQIHGYQIKHGFFPCTIVENSLIYMYAE--NERDDAAFQLFRKMSCRDIV 318
Query: 314 SWTAMIVGYTQSGYPDKALKLFTD---KKWAD-FFPNHVTIASVLSASAQLGNLNMGRMV 369
SW MI + +AL L ++ +D +P+ VTI + + A + L +L +G+++
Sbjct: 319 SWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVI 378
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS--GLDDN- 425
H R GL D V N+LVDMY KC + A + E +D+ +WNS+I+ G++ N
Sbjct: 379 HGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNG 438
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
P+A+T +++SACA G V G + ++ L +
Sbjct: 439 ISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIE--- 495
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
+F +A +M F+ E W A++GG G+ G+
Sbjct: 496 ---HFACMRPEAFIQKMPFEPGPE----VWGALLGGCGLFGN 530
>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
Length = 659
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 178/504 (35%), Positives = 289/504 (57%), Gaps = 29/504 (5%)
Query: 202 VFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+F+ +DK +V SW S+IA ++ + E L+ F+ MR+ + + + + AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ GK H G + + + +AL+ MY CG + DAR VFDE+ D+VSWT+MI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIR 150
Query: 321 GYTQSGYPDKALKLFTDKKWAD------FFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
GY +G A+ LF D + F + + + SV+SA +++ + +HS I
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 375 RLGLE-DYTVINALVDMYAKCHV--IADARYIFETTSEKDVIAWNSIIS-----GLDDN- 425
+ G + +V N L+D YAK +A AR IF+ +KD +++NSI+S G+ +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
V+ +A+TL +V+ A + GA+++G +H + GL +V VGT+++
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL-EDDVIVGTSII 329
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y KCG ++AR FD M+ KN +W+AMI GYGM G +L LF M++ V+PN +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F ++L+ACSH G+ EGW+ F +M F P ++HY CMVDLL RAG L++A + ++
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M ++PD ++ + L C ++ +L E+ + ++ EL YY+L+S++YA GRW V
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+VR +MK RGL K PG SL++L+
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELN 533
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 201/393 (51%), Gaps = 41/393 (10%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F +KAC L DI G + H + G D FV + L+ MY+ C + +R+VFDE
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN---------QITLGSLVTACAK 258
+++VSWTSMI GY N A + + LF + V+ N + L S+++AC++
Sbjct: 139 KRDIVSWTSMIRGYDLNGNALDAVSLFKDL---LVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN--IRDARSVFDELCSIDLVSWT 316
+ A + +H +++K G + + LLD Y K G + AR +FD++ D VS+
Sbjct: 196 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 317 AMIVGYTQSGYPDKALKLF---TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
+++ Y QSG ++A ++F K F N +T+++VL A + G L +G+ +H
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTF--NAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 374 IRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------- 421
IR+GLED ++ +++DMY KC + AR F+ K+V +W ++I+G
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 422 ------LDDNVSPDAVTLVSVISACASLG-AVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+D V P+ +T VSV++AC+ G V+ +A + G+ + G +++
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG-CMVD 432
Query: 475 FYAKCGDAQSARMVFDAMREK-NTVTWSAMIGG 506
+ G Q A + M+ K +++ WS+++
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 201/403 (49%), Gaps = 35/403 (8%)
Query: 44 FHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYA 99
+ + S PC + C S + K H V G +D ++ L+ MY + G ++ A
Sbjct: 73 YPTRSSFPCA--IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDA 130
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF------SKVL 153
R VFD +P D S+ MIR Y LN D V +K + + D+ +F V+
Sbjct: 131 RKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRD--IGSSRQVFDETLDK 209
AC + +H ++K G D V G L+D YAK + + +R++FD+ +DK
Sbjct: 191 SACSRVPAKGLTESIHSFVIK-RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK 249
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+ VS+ S+++ Y Q+ + E +F R+ + V N ITL +++ A + AL GK +
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H ++++G+E + + T+++DMY KCG + AR FD + + ++ SWTAMI GY G+
Sbjct: 310 HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA 369
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLG---------NLNMGRMVHSLGIRLGLE 379
KAL+LF + PN++T SVL+A + G N GR G+ GLE
Sbjct: 370 AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR----FGVEPGLE 425
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISG 421
Y +VD+ + + A + + K D I W+S+++
Sbjct: 426 HY---GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Brachypodium distachyon]
Length = 779
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 199/628 (31%), Positives = 338/628 (53%), Gaps = 37/628 (5%)
Query: 86 LVSMYGS-----FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
L+++Y S G V R +FD+ P + S+ ++ WY + +E + M +
Sbjct: 143 LLNLYASCARYRHGGVDVVRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLED 202
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIG 197
F V A D ++ ++K G D FV++ + M+++ D+
Sbjct: 203 GIRPTPVSFVNVFPAAAS-DDPSWPFFLYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQ 261
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR-MREGFVEGNQITLGSLVTAC 256
S+R VFD KN+ W +MI GYVQN E + LF + M V + +T S +TA
Sbjct: 262 SARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAA 321
Query: 257 AKLRALHQGKWLHGYILK-IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
++ + G+ LHGY++K + + L AL+ MY +CGN+ A +FD+L D+VSW
Sbjct: 322 SQSQDGKLGQQLHGYLMKGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSW 381
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
M+ + Q+ + + L L + F + VT+ +VLSA++ G+L +G+ H IR
Sbjct: 382 NTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIR 441
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFET-TSEKDVIAWNSIISG------------- 421
G+E + + L++MY+K I A+ +F+ +++D + WN++I+G
Sbjct: 442 HGIEGEGLESYLINMYSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLA 501
Query: 422 ----LDDNVSPDAVTLVSVISACASLG-AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
++ V P +VTL SV+ AC +G VQ G +H+++ + L +N++VGTAL++ Y
Sbjct: 502 FRAMVEAGVEPTSVTLASVLPACEPVGEGVQAGKQIHSFALRHSL-DTNIFVGTALVDMY 560
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+KCG+ +A VFD M EK+TVT++ MI G G G G +L LF M + ++P+ V F
Sbjct: 561 SKCGEITAAENVFDRMTEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFL 620
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+SAC+++G+V EG + SM F + +H+ C+VDLLA+AGR+EEA +F+E++
Sbjct: 621 AAISACNYSGLVDEGLSLYRSM-ETFGLSATPQHHCCIVDLLAKAGRVEEAYDFVESLGE 679
Query: 597 EPD-VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD----KACYYVLVSNLYASDGRWI 651
+ + ++++G+ L C + +L + K+L + A Y VL+S L+A++G W
Sbjct: 680 DGNFIAIWGSLLASCKAQGKQELTAFVTDKLLNIEKQYGHAHAGYNVLLSQLFAAEGNWS 739
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDLDIA 679
+ +R M+ RGL K G S + + A
Sbjct: 740 SADSLRREMRVRGLRKDVGSSWIKVQGA 767
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 165/626 (26%), Positives = 286/626 (45%), Gaps = 51/626 (8%)
Query: 94 GHVKYARSVF-DSMPNPDFYSF-QVMIRWYFLNDLYKDIVEFYKCMRKRLK---EHDNFV 148
G +++AR + D++P P V++ Y L + Y + + D++
Sbjct: 43 GRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALGLYGVLNHAARPPPRSDHYT 102
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVL-TGLVDMYAKCR-----DIGSSR 200
+S L AC R + G VH +++ PD+ VL L+++YA C + R
Sbjct: 103 YSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARYRHGGVDVVR 162
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++FD T +NVVSW +++ YV+ E L +F RM E + ++ ++ A A
Sbjct: 163 RLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAAS-- 220
Query: 261 ALHQGKW---LHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
W L+G ++K G+E S L V++ + M+ + G+++ AR VFD ++ W
Sbjct: 221 --DDPSWPFFLYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVW 278
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSLGI 374
MI GY Q+G +A+ LF + P + VT S ++A++Q + +G+ +H +
Sbjct: 279 NTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYLM 338
Query: 375 RLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------- 425
+ VI NALV MY++C + A +F+ EKD+++WN++++ N
Sbjct: 339 KGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGL 398
Query: 426 ----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
DAVTL +V+SA ++ G +Q+G H Y + G+ + + L+N
Sbjct: 399 LLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIEGEGLE--SYLINM 456
Query: 476 YAKCGDAQSARMVFDAM-REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y+K G A+ VFD +++ VTW+AMI GY G ++ F M+ V+P V
Sbjct: 457 YSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVT 516
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
++L AC G + K +S ++ +VD+ ++ G + A + M
Sbjct: 517 LASVLPACEPVGEGVQAGKQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRM 576
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYASDGRWIR 652
E + + G G + D + M + L PD + +S S G
Sbjct: 577 -TEKSTVTYTTMISGLGQHGFGDRALFLFYSMQDNGLKPDAVTFLAAISACNYS-GLVDE 634
Query: 653 VNQVRELMKQRGLSKSPG--CSLVDL 676
+ M+ GLS +P C +VDL
Sbjct: 635 GLSLYRSMETFGLSATPQHHCCIVDL 660
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 125/259 (48%), Gaps = 6/259 (2%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP-D 110
+L +TG L K H LI G+ + + L++MY GH+ A+ VFD N D
Sbjct: 419 VLSAASNTGDLQIGKQSHGYLIRHGIEGEGLESYLINMYSKSGHIDMAQRVFDGYGNDRD 478
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD-IDEGMKVH 169
++ MI Y + + V ++ M + E + + VL AC + + + G ++H
Sbjct: 479 EVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPVGEGVQAGKQIH 538
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
++ + FV T LVDMY+KC +I ++ VFD +K+ V++T+MI+G Q+
Sbjct: 539 SFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISGLGQHGFGD 598
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
L LF M++ ++ + +T + ++AC + +G L+ + G+ ++
Sbjct: 599 RALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSMETFGLSATPQHHCCIV 658
Query: 289 DMYVKCGNIRDARSVFDEL 307
D+ K G + +A + L
Sbjct: 659 DLLAKAGRVEEAYDFVESL 677
>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
Length = 916
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 187/618 (30%), Positives = 324/618 (52%), Gaps = 23/618 (3%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
T L++ Y G + A VF S N + ++ MI+ ND + + ++ M
Sbjct: 300 TTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEM 359
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRD 195
R + + D ++ AC + + EG +VH I+K G + V L+D+Y KC D
Sbjct: 360 RSK-NQPDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCND 418
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDC-AQEGLVLFNRMREGFVEGNQITLGSLVT 254
++R +F ++++SW +MI+GY +ND +E +F + + T+ +++
Sbjct: 419 PSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIP 478
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-DLV 313
+C + L+ GK +H +ILK G +L+ MY+ CG+ A S+ + + + D++
Sbjct: 479 SCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDII 538
Query: 314 SWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
SW IVG Q+G AL+ F P+ +T+ SVLS L ++G+ +H +
Sbjct: 539 SWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCM 598
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------ 425
++ +E + V NAL+ MY + A IF + +++ +WN +ISG N
Sbjct: 599 ALKRLIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRA 658
Query: 426 ---------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
P+ +++V +I AC LG ++ G ++H + + GL +NV++ +L++ Y
Sbjct: 659 LQFYKKMEYFEPNEISIVGIICACTQLGDLRQGKNIHGHVVRFGL-QTNVFISASLVDMY 717
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+KCG + VF++ EK+ W++MI +G G G S+ +F M N V+ F
Sbjct: 718 SKCGRLDISIRVFESSAEKSIACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFI 777
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+LSACSH+G+ EG K ++ M F +P+ +H+VC+VD+L RAGRL+EA +F+E++P
Sbjct: 778 ALLSACSHSGLTDEGLKYYHLMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPS 837
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
+ ++GA L C S + E + K +L L P+ + YYV +SNLYA W QV
Sbjct: 838 KQAHGVWGALLSACSKKSELKMCESVAKHLLCLEPENSGYYVTMSNLYAYQDMWSGAVQV 897
Query: 657 RELMKQRGLSKSPGCSLV 674
R++++ +GL K G S++
Sbjct: 898 RDILQDKGLMKPRGRSII 915
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 175/580 (30%), Positives = 286/580 (49%), Gaps = 39/580 (6%)
Query: 67 AFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
AFH + + L D NT L+ MY G + VF MP D S+ M+ N
Sbjct: 185 AFHGMALKRRLDTDLSLWNT-LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFN 243
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI-DEGMKVHCEIVKVGGPD--SF 181
L + ++K M + + D S VL AC L+D+ G VH ++K+G D S
Sbjct: 244 GLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSS 303
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V L+ Y + ++ +VF T +KN+V+W +MI G V+ND E + +F MR
Sbjct: 304 VENSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSK- 362
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDA 300
+ + TL ++++AC L +GK +HGYI+K G I + +LLD+Y+KC + A
Sbjct: 363 NQPDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTA 422
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQS-GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
R +F + DL+SW MI GY+++ ++A +F T+ +V+ +
Sbjct: 423 RILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFC 482
Query: 360 LGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFET-TSEKDVIAWNS 417
+LN G+ VHS ++ G L + N+L+ MY C A + E+ T D+I+WN+
Sbjct: 483 PQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNT 542
Query: 418 IISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
I G N ++PD++TLVSV+S C +L +G S+H + K+
Sbjct: 543 AIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKR 602
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L+ N+ V ALL Y + GD +SA ++F ++ +N +W+ MI G+ +G +L
Sbjct: 603 -LIEFNLRVKNALLTMYFRFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQF 661
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
+ M E +PNE+ I+ AC+ G + +G K + F ++ +VD+ +
Sbjct: 662 YKKM--EYFEPNEISIVGIICACTQLGDLRQG-KNIHGHVVRFGLQTNVFISASLVDMYS 718
Query: 580 RAGRLEEALEFMENMPIEPDV----SLFGAF-LHGCGLYS 614
+ GRL+ ++ E+ E + S+ AF HG GL S
Sbjct: 719 KCGRLDISIRVFES-SAEKSIACWNSMISAFGFHGLGLKS 757
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 242/515 (46%), Gaps = 41/515 (7%)
Query: 151 KVLKAC--CELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ L AC + D +HC +K D V T ++ Y++ RD+ S+ QVFDE
Sbjct: 66 RALGACRGASREEADGVAALHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAA 125
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+++ W + I+ N + +VLF M + + ++ +++ ++ R+L G
Sbjct: 126 APDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIA 185
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
HG LK ++ + L L+DMY KCG+ + VF + D SW +M+ G +G
Sbjct: 186 FHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGL 245
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL-NMGRMVHSLGIRLGLEDYT--VI 384
+ + F + + F + V+++ VLSA + L +L + G VHS I+LG ED T V
Sbjct: 246 AEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVE 305
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------VSP 428
N+L+ Y + A +F +TS K+++ WN++I GL +N P
Sbjct: 306 NSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQP 365
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D TLV++ISAC G + G +H Y K+G + VG +LL+ Y KC D +AR++
Sbjct: 366 DVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARIL 425
Query: 489 FDAMREKNTVTWSAMIGGYGMQGD-GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F M ++ ++W+ MI GY G + A+F +L+E + ++ +C
Sbjct: 426 FRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQD 485
Query: 548 VGEGWKCFYSMCRDFKFVP------SMKH-YVCMVDLLARAGRLEEALEFMENMPIEPDV 600
+ G K +S + F+ S+ H Y+C D LA A +E++ D+
Sbjct: 486 LNFG-KSVHSFILKYGFLTGVSAANSLIHMYICCGDSLA-------AFSLLESITPMSDI 537
Query: 601 SLFGAFLHGC---GLYSRFDLGEVMIKKMLELHPD 632
+ + GC GLY + L L+PD
Sbjct: 538 ISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPD 572
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 145/540 (26%), Positives = 253/540 (46%), Gaps = 38/540 (7%)
Query: 34 QHELDQTFASFHSLPSIPCLNLLGLCKSTG-----SLKAFH-ALLIVDGLTNDKCNTKLV 87
H LD+T S+ + LG C+ + A H A L + + T ++
Sbjct: 51 HHLLDETPRRASSI-----VRALGACRGASREEADGVAALHCAALKSAAVLDPPVRTSVI 105
Query: 88 SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
+ Y V A VFD PD + I LN Y D V ++ M L D+
Sbjct: 106 TAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRYGDAVVLFRWMVDVLGVFDST 165
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
+L R ++ G+ H +K D + L+DMYAKC D SS VF
Sbjct: 166 SMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRM 225
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ-G 265
++ SW SM++G + N A+ F M + ++++L +++AC+ L+ L G
Sbjct: 226 PYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFG 285
Query: 266 KWLHGYILKIGIE-INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ +H ++K+G E S + +L+ Y + G A VF + +LV+W AMI G +
Sbjct: 286 ESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVE 345
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYT 382
+ ++A+ +F + + + P+ T+ +++SA G L G+ VH I+ G E+ +
Sbjct: 346 NDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECS 404
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------------LDD 424
V N+L+D+Y KC+ + AR +F T +D+I+WN++ISG L +
Sbjct: 405 VGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSE 464
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+S T+V+VI +C + G S+H++ K G L + V +L++ Y CGD+ +
Sbjct: 465 GLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFL-TGVSAANSLIHMYICCGDSLA 523
Query: 485 ARMVFDAMRE-KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQPNEVIFTTILSAC 542
A + +++ + ++W+ I G G G +L F M + + P+ + ++LS C
Sbjct: 524 AFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVC 583
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 199/629 (31%), Positives = 324/629 (51%), Gaps = 31/629 (4%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGH-VKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
H LL+ GL +K + LV MY G ++ A VF + D ++ VMI + N
Sbjct: 171 IHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNG 230
Query: 126 LYKDIVEFYKCM-RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVL 183
++ + + M ++ + D F+ +LK C L ++ M++H + K G D V
Sbjct: 231 DFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEV---MQIHGIVYKFGAEVDVVVE 287
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ +VD+YAKCRD+ S R++FD K+ W+SMI+GY N+ +E + F M V+
Sbjct: 288 SAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVK 347
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+Q L S + AC ++ L+ G +HG ++K G + + + + LL++Y G + D +
Sbjct: 348 LDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKL 407
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYP-DKALKLFTDKKWADFFP-NHVTIASVLSASAQLG 361
F + D+V+W +MI+ + G + ++LF + + F T+ +VL + +
Sbjct: 408 FSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDS 467
Query: 362 NLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L GR +HSL ++ L +T++ NALV MY++C I DA F KD +W+SII
Sbjct: 468 DLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIG 527
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
LD+ ++ + +L ISAC+ L + G LH ++ K G S
Sbjct: 528 TCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGY-S 586
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
+VY+G+++++ YAKCG+ + + VFD + N VT++A+I GY G ++ + S +
Sbjct: 587 CDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKL 646
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
V PN V F ++SACSH G V E F M +K P +HY C+VD RAGR
Sbjct: 647 EKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGR 706
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
LEEA + ++ E S + L C +S +GE KM+EL+P Y+L+SN+
Sbjct: 707 LEEAYQIVQKDGSE---SAWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNI 763
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCS 672
Y +G W R+ M + + K PG S
Sbjct: 764 YIEEGNWEEALNCRKKMAKIRVKKDPGNS 792
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 152/591 (25%), Positives = 269/591 (45%), Gaps = 49/591 (8%)
Query: 55 LLGLCKSTGSL-----KAFHA-LLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
LL L K + + HA L+I ++ L+S Y + YA +FD MPN
Sbjct: 52 LLSLAKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPN 111
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ ++ +I + E + MR + + F+ +L+AC G+++
Sbjct: 112 RNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQI 171
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAK-CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
H +V+ G + F + LV MY K D+ + +VF L+++VV+W MI+G+ QN
Sbjct: 172 HGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGD 231
Query: 227 AQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ LF+ M E ++ ++IT SL+ C+ L + Q +HG + K G E++ + +
Sbjct: 232 FRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEVMQ---IHGIVYKFGAEVDVVVES 288
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
A++D+Y KC ++ R +FD + D W++MI GYT + ++A+ F D
Sbjct: 289 AMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKL 348
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
+ ++S L A ++ +LN G VH L I+ G + D V + L+++YA + D +F
Sbjct: 349 DQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLF 408
Query: 405 ETTSEKDVIAWNSIISGLDDN-------------------VSPDAVTLVSVISACASLGA 445
+KD++AWNS+I + TLV+V+ +C
Sbjct: 409 SRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSD 468
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+ G +H+ K L + VG AL++ Y++C A F + K+ +WS++IG
Sbjct: 469 LPAGRQIHSLIVKSSLCRHTL-VGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIG 527
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
+L L +ML+E + +SACS + EG +
Sbjct: 528 TCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEG--------KQLHVF 579
Query: 566 PSMKHYVC-------MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
Y C ++D+ A+ G +EE+ E + + ++P+ F A + G
Sbjct: 580 AIKSGYSCDVYIGSSIIDMYAKCGNIEES-EKVFDEQLKPNEVTFNAIISG 629
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
S ++ LL+FY+K + A +FD M +N VTW+ +I + G + +F+ M
Sbjct: 81 SQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHM 140
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR----DFKFVPSMKHYVCMVDLLA 579
+ +PNE F +L AC++ + G + + R KF S Y+ L
Sbjct: 141 RVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYM----YLK 196
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE---LHPDKACY 636
L +AL + +E DV + + G F + + + +M E L PD+ +
Sbjct: 197 GGDDLRDALRVFYGL-LERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITF 255
Query: 637 YVLV 640
L+
Sbjct: 256 ASLL 259
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/675 (29%), Positives = 311/675 (46%), Gaps = 124/675 (18%)
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
+S Y + AR +FD MP S+ MI Y + + + + M + +
Sbjct: 79 ISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSE 138
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFD 204
FS VL C LR + +G +HC ++K G +SF L G L+ YA C +IG +R+VFD
Sbjct: 139 STFSSVLSVCARLRCLRDGKLIHCLVLK-SGSESFELVGSALLYFYASCFEIGEARRVFD 197
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--------------------------- 237
+ +N V W+ M+ GYV + + L +F +M
Sbjct: 198 VLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALE 257
Query: 238 ------REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
R G N+ T +V AC +L L G+ +HG ++K G+E + + AL++ Y
Sbjct: 258 MFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFY 317
Query: 292 VKC-------------------------------GNIRDARSVFDELCSIDLVSWTAMIV 320
+C G I DA VF+ + ++ VS+ MI
Sbjct: 318 CECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIK 377
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
GY G D + +LF F +
Sbjct: 378 GYAVGGQMDDSKRLFEKMPCRTIFSS---------------------------------- 403
Query: 381 YTVINALVDMYAKCHVIADARYIFE-TTSEKDVIAWNSIISGLDDNVSPDAV-------- 431
N ++ +Y++ I A +FE T +EKD + WNS+ISG + P+
Sbjct: 404 ----NTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMH 459
Query: 432 ---------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
T ++ AC+ LG++Q G LHA+ K SNVYVGT+L++ Y+KCG
Sbjct: 460 RLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPF-ESNVYVGTSLIDMYSKCGSI 518
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A+ F ++ N W+A+I G+ G G +++LF M+ + + PN F +LSAC
Sbjct: 519 MEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSAC 578
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S G+V EG K F+SM R + P+++HY C+VDLL R+G + EA EF++ MP+E D +
Sbjct: 579 SRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVV 638
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L C + ++GE + +KM P YV++SN+YA GRW VR++++
Sbjct: 639 WGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRG 698
Query: 663 RGLSKSPGCSLVDLD 677
+ K PGCS ++L+
Sbjct: 699 FKVKKDPGCSWIELN 713
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 209/496 (42%), Gaps = 63/496 (12%)
Query: 66 KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFD-------------------- 104
K H L++ G + + + L+ Y S + AR VFD
Sbjct: 158 KLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTC 217
Query: 105 -----------SMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDN-FVFSK 151
MP D ++ +I + N D +E ++ M + + N F F
Sbjct: 218 NVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDC 277
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
V++AC L + G VH ++K G D + LV+ Y +C I + +V ++
Sbjct: 278 VVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPC 337
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
+ + S+I G + ++ ++FN G E N ++ ++ A + K L
Sbjct: 338 LNALNSLIEGLISMGRIEDAELVFN----GMTEMNPVSYNLMIKGYAVGGQMDDSKRLFE 393
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPD 329
+ I ++ +++ +Y + G I A +F+E + D V+W +MI GY SG P+
Sbjct: 394 KMPCRTIFSSNTMIS----VYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPE 449
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALV 388
+ALKL+ T +++ A + LG+L G+++H+ I+ E + +L+
Sbjct: 450 EALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLI 509
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAV 431
DMY+KC I +A+ F + +V AW ++I+G ++ ++P+
Sbjct: 510 DMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGA 569
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
T V V+SAC+ G V G + + ++ + +++ + G + A
Sbjct: 570 TFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKK 629
Query: 492 MR-EKNTVTWSAMIGG 506
M E + V W A++
Sbjct: 630 MPLEADGVVWGALLSA 645
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 140/342 (40%), Gaps = 58/342 (16%)
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-------------- 423
L + N + YAK + AR +F+ ++ V++WN++IS
Sbjct: 69 LSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYS 128
Query: 424 ---DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
++ T SV+S CA L ++ G +H K G S + VG+ALL FYA C
Sbjct: 129 MHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFEL-VGSALLYFYASCF 187
Query: 481 DAQSARMVFDAMREKNTVTWSAM-------------------------------IGGYGM 509
+ AR VFD + +N V WS M I G+
Sbjct: 188 EIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSK 247
Query: 510 QGDG-GGSLALFSDMLNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR-DFKFVP 566
GDG G +L +F M+ E PNE F ++ AC G++ G + + ++ P
Sbjct: 248 NGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDP 307
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
S+ +V+ +++AL + + + P ++ + + G R + E++ M
Sbjct: 308 SIGG--ALVEFYCECEAIDDALRVCKGV-VNPCLNALNSLIEGLISMGRIEDAELVFNGM 364
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
E++P Y L+ YA G+ ++ E M R + S
Sbjct: 365 TEMNP---VSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSS 403
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
Y+ Q LS + A+ N YAK AR +FD M ++ V+W+ MI Y G
Sbjct: 62 YTAHQSNLSEIISTNIAISN-YAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFS 120
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+L L M ++ +E F+++LS C+ + +G
Sbjct: 121 EALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDG 157
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 33 TQHEL--DQTFASFHSLPSIPCLNLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKL 86
T H L QT ++F +L C GSL+ HA LI +N T L
Sbjct: 457 TMHRLSIQQTRSTFSAL--------FHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSL 508
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
+ MY G + A++ F S+ +P+ ++ +I + + L + + + M ++ +
Sbjct: 509 IDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNG 568
Query: 147 FVFSKVLKACCELRDIDEGMKV 168
F VL AC ++EGMK+
Sbjct: 569 ATFVGVLSACSRAGLVNEGMKI 590
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 210/675 (31%), Positives = 332/675 (49%), Gaps = 46/675 (6%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLV-SMYGSFGHVKYARSVFD 104
++ L +L C G L ++ HA ++ GL L+ +YGS G V A +F+
Sbjct: 128 AVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFE 187
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
M D S+ I + +E ++ M+ L C ++R +
Sbjct: 188 RMER-DLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIR---Q 243
Query: 165 GMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H + + G + V+ T L YA+ + +++VFD +++VVSW +M+ Y Q
Sbjct: 244 ARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQ 303
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ E +LF RM + +++TL + T C+ LR G+ +H L+ G++ + L
Sbjct: 304 HGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRF---GRMIHACALEKGLDRDIVL 360
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
ALLDMY +CG+ +AR +F+ + + VSW MI G +Q G +AL+LF +
Sbjct: 361 GNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGM 419
Query: 344 FPNHVTIASVLSASA----QLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIA 398
P T ++L A A + + GR +HS + G I A+V MYA C I
Sbjct: 420 APVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAID 479
Query: 399 DARYIFETTS---EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVIS 438
+A F+ + DV++WN+IIS L + V+P+ +T V+V+
Sbjct: 480 EAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLD 539
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNT 497
ACA A+ G +H + G+ SNV+V TAL + Y +CG +SAR +F+ + E++
Sbjct: 540 ACAGAAALTEGVIVHDHLRHSGM-ESNVFVATALASMYGRCGSLESAREIFEKVAVERDV 598
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
V ++AMI Y G G +L LF M E +P+E F ++LSACSH G+ EGW+ F S
Sbjct: 599 VIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRS 658
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
M + + PS HY C VD+L RAG L +A E + M ++P V ++ L C Y D
Sbjct: 659 MRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVD 718
Query: 618 LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
G + + EL P YV++SN+ A G+W +VR M+ RGL K G S +++
Sbjct: 719 RGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIK 778
Query: 678 ------IANDFSFSR 686
+A D S R
Sbjct: 779 SRVHEFVAGDRSHPR 793
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 161/568 (28%), Positives = 267/568 (47%), Gaps = 37/568 (6%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+ HA ++ GL + N L+ +Y + VF + D S+ +I Y +
Sbjct: 49 RRIHARIVSLGLEEELGN-HLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHG 107
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG 185
K + + M++ D F VLKAC L D+ +G +H IV+ G VL
Sbjct: 108 QAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLAN 167
Query: 186 -LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ +Y C + S+ +F E +++++VSW + IA Q+ L LF RM+ V
Sbjct: 168 LLLHIYGSCGCVASAMLLF-ERMERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRP 226
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ITL ++ CAK+R Q + +H + + G+E + TAL Y + G++ A+ VF
Sbjct: 227 ARITLVITLSVCAKIR---QARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVF 283
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D D+VSW AM+ Y Q G+ +A LF P+ VT+ ++AS +L
Sbjct: 284 DRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL---VNASTGCSSLR 340
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
GRM+H+ + GL+ D + NAL+DMY +C +AR++FE + ++WN++I+G
Sbjct: 341 FGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIP-GNAVSWNTMIAGSS 399
Query: 424 -----------------DNVSPDAVTLVSVISACAS----LGAVQVGSSLHAYSTKQGLL 462
+ ++P T ++++ A AS A+ G LH+ G
Sbjct: 400 QKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCG-Y 458
Query: 463 SSNVYVGTALLNFYAKCG--DAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLAL 519
+S +GTA++ YA CG D +A AM ++ + V+W+A+I G G +L
Sbjct: 459 ASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGF 518
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M V PN++ +L AC+ + EG + R ++ + +
Sbjct: 519 FRRMDLHGVAPNQITCVAVLDACAGAAALTEG-VIVHDHLRHSGMESNVFVATALASMYG 577
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFL 607
R G LE A E E + +E DV +F A +
Sbjct: 578 RCGSLESAREIFEKVAVERDVVIFNAMI 605
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/502 (28%), Positives = 246/502 (49%), Gaps = 45/502 (8%)
Query: 151 KVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
++L+A + R + +G ++H IV +G + L+ +Y KC +G +VF ++
Sbjct: 34 RLLRAAGDDRLLSQGRRIHARIVSLGLEEELG-NHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
SWT++I Y ++ A+ + +F+RM++ V + +T +++ ACA+L L QG+ +H
Sbjct: 93 EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+I++ G+E S L LL +Y CG + A +F+ + DLVSW A I QSG D
Sbjct: 153 WIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDM 211
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVD 389
AL+LF + P +T+ LS A+ + R +HS+ GLE V++ AL
Sbjct: 212 ALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALAS 268
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVT 432
YA+ + A+ +F+ +E+DV++WN+++ L + + P VT
Sbjct: 269 AYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVT 328
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
LV+ + C+SL + G +HA + ++G L ++ +G ALL+ Y +CG + AR +F+ +
Sbjct: 329 LVNASTGCSSL---RFGRMIHACALEKG-LDRDIVLGNALLDMYTRCGSPEEARHLFEGI 384
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS----HTGMV 548
N V+W+ MI G +G +L LF M E + P + +L A + +
Sbjct: 385 -PGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP--DVSLFGAF 606
EG K +S + +V + A G ++EA + +E DV + A
Sbjct: 444 AEGRK-LHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAI 502
Query: 607 L-----HG-----CGLYSRFDL 618
+ HG G + R DL
Sbjct: 503 ISSLSQHGHGKRALGFFRRMDL 524
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 136/300 (45%), Gaps = 27/300 (9%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
P H + +L A+ L+ GR +H+ + LGLE+ + N L+ +Y KC + D +F
Sbjct: 29 PAH--LVRLLRAAGDDRLLSQGRRIHARIVSLGLEE-ELGNHLLRLYLKCESLGDVEEVF 85
Query: 405 ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQ 447
+D +W +II+ + V DAVT ++V+ ACA LG +
Sbjct: 86 SRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLS 145
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G S+HA+ + GL +V + LL+ Y CG SA ++F+ M E++ V+W+A I
Sbjct: 146 QGRSIHAWIVESGLEGKSV-LANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAAN 203
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GD +L LF M E V+P + LS C+ + +S+ R+ +
Sbjct: 204 AQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQA----RAIHSIVRESGLEQT 259
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+ + AR G L++A E + E DV + A L + ++ +ML
Sbjct: 260 LVVSTALASAYARLGHLDQAKEVFDRAA-ERDVVSWNAMLGAYAQHGHMSEAALLFARML 318
>gi|39546235|emb|CAE04244.3| OSJNBa0089N06.5 [Oryza sativa Japonica Group]
gi|125549842|gb|EAY95664.1| hypothetical protein OsI_17530 [Oryza sativa Indica Group]
gi|215686910|dbj|BAG90780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 559
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/548 (32%), Positives = 300/548 (54%), Gaps = 22/548 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
++S +L+ C +G VH + PD + T LV YA+ D+ ++R+VFD
Sbjct: 13 LYSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDG 72
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
++VVSWT+M++GY +N +E L LF MR NQ T GS +ACA G
Sbjct: 73 MPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSG 132
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ +H K + + +AL+DM+++CG++ DAR +F E+ D+VSW A+I G+ +
Sbjct: 133 EQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVER 192
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVI 384
G+ AL LF+ P+H T+ S L A +G ++HS I+LG ++ VI
Sbjct: 193 GHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVI 252
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--LDDNVSPDA------------ 430
+L++ YAKC ++ AR I+++ SE D+++ ++ISG +D N S DA
Sbjct: 253 GSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGL 312
Query: 431 ----VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
V L SV+ CAS+ + + G+ +HAY K+ + ++ + AL++ YAK G+ A+
Sbjct: 313 WIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMG-DIALDNALVDMYAKAGEFSDAK 371
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
FD M +N ++W+++I G G G ++ LF+ M+ + V+PN+V F ++LSAC H G
Sbjct: 372 RAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCG 431
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+ +G + F SM + P +HY +DLLAR G+LE+A + ++ ++P+ S+ GA
Sbjct: 432 LTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAM 491
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C L+ LGE K + + P + Y +++N+YA W + RE++ +
Sbjct: 492 LGACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDG 551
Query: 667 KSPGCSLV 674
K G S++
Sbjct: 552 KEVGFSVI 559
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 217/451 (48%), Gaps = 21/451 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+TKLV Y FG V AR VFD MP+ S+ M+ Y N ++ +E + MR
Sbjct: 50 STKLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGA 109
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ F + AC G +VH C D FV + L+DM+ +C + +RQ
Sbjct: 110 RPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQ 169
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F E K+VVSW ++I G+V+ + L LF+ M + + + TLGS + AC +
Sbjct: 170 LFAEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGV 229
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+ +H I+K+G ++ +L++ Y KC ++ AR ++D + DLVS TA+I G
Sbjct: 230 AVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISG 289
Query: 322 YT-QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIRLGLE 379
YT Y + A++LF + + V ++SVL A + + G +H+ + + +
Sbjct: 290 YTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMG 349
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
D + NALVDMYAK +DA+ F+ ++VI+W S+I+ +
Sbjct: 350 DIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMV 409
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+D V P+ VT +S++SAC G G + + ++ ++ A+ G
Sbjct: 410 EDGVRPNDVTFLSLLSACGHCGLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQL 469
Query: 483 QSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
+ A ++V + N+ AM+G + G+
Sbjct: 470 EDAWKLVQKTNLKPNSSMLGAMLGACKLHGN 500
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 103/225 (45%), Gaps = 14/225 (6%)
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P A S++ C S A + G S+H ++++ T L+ FYA+ GD +AR
Sbjct: 9 PTAPLYSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARK 68
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VFD M ++ V+W+AM+ GY G +L LF+ M +PN+ + + SAC+ G
Sbjct: 69 VFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGC 128
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
G + ++ +F M ++D+ R G +E+A + M + DV + A +
Sbjct: 129 ARSGEQ-VHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMG-KKDVVSWNALI 186
Query: 608 HG----------CGLYSRFDLGEVMIKKMLELHPD-KACYYVLVS 641
G GL+S L E MI L KAC V V+
Sbjct: 187 RGFVERGHDGDALGLFSSM-LKEAMIPDHYTLGSALKACGIVGVA 230
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/596 (30%), Positives = 317/596 (53%), Gaps = 35/596 (5%)
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP + ++ ++ Y N + + + M + ++F + L AC +L + G
Sbjct: 1 MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+VH V+ G D+++ + L++MY++C + ++++VFD +VV +TS+I+ + +N
Sbjct: 61 EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120
Query: 225 ---DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK-IGIEIN 280
+ A E L+ +M + ++ N+ T+ +++TAC ++ G+ +HGY++K IG+
Sbjct: 121 GEFELAAEALI---QMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQ 173
Query: 281 S-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
S + TAL+D Y + G + A++VFD L ++VSW +M+ Y + G ++AL++F D
Sbjct: 174 SVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMI 233
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIA 398
PN ++ VL A +G +GR +H I+ L D V NAL+ MY + ++
Sbjct: 234 SEGVDPNEFALSIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVE 290
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACA 441
+ + D+++W + IS N +P+ SV+S+CA
Sbjct: 291 ELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCA 350
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+ ++ G H + K G S + G AL+N Y+KCG SAR+ FD M + +W+
Sbjct: 351 DVASLDQGMQFHCLALKLGC-DSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWN 409
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
++I G+ GD +L +FS M + ++P++ F +L C+H+GMV EG F M
Sbjct: 410 SLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQ 469
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
+ F P+ HY CM+D+L R GR +EAL + +MP EPD ++ L C L+ D+G++
Sbjct: 470 YSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKL 529
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+++EL + YVL+SN+YA G W +VR M + G+ K GCS ++++
Sbjct: 530 AADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEIN 585
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 220/480 (45%), Gaps = 33/480 (6%)
Query: 52 CLNLLGLCKSTGSLKA---FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMP 107
C L C G+L+A H+L + G D + L+ MY G + A+ VFD M
Sbjct: 44 CNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMD 103
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+PD + +I + N ++ E M K+ + + + +L AC + G +
Sbjct: 104 SPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVL----GQQ 159
Query: 168 VHCEIVKVGGPDS---FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H ++K G S + T L+D Y++ + ++ VFD KNVVSW SM+ Y+++
Sbjct: 160 IHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRD 219
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+E L +F M V+ N+ L ++ AC ++ G+ LH +K + + +
Sbjct: 220 GRLEEALQVFGDMISEGVDPNEFALSIVLGACG---SIGLGRQLHCSAIKHDLITDIRVS 276
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
ALL MY + G + + ++ +++ + DLVSWT I Q+G+ +KA+ L F
Sbjct: 277 NALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFT 336
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
PN +SVLS+ A + +L+ G H L ++LG + + NAL++MY+KC + AR
Sbjct: 337 PNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLA 396
Query: 404 FETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAV 446
F+ DV +WNS+I G + + PD T + V+ C G V
Sbjct: 397 FDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMV 456
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIG 505
+ G Q + +++ + G A RM+ D E + + W ++
Sbjct: 457 EEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 516
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 181/536 (33%), Positives = 296/536 (55%), Gaps = 30/536 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDET 206
+ +L+ C EL G K+H +VK G ++ +V LV MY+KC + +++VFD
Sbjct: 72 AYGNLLRDCGEL---AAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGM 128
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL--RALHQ 264
++ +SW+ MIAGYV++ A+E + L+ M ++ + T +++ AC+ L RAL
Sbjct: 129 RRRDSISWSKMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEV 185
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H ++ +I ++ + + +AL+ M+ KCG+++++R VFD+ D++ W +MIV Y+Q
Sbjct: 186 GKEIHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQ 245
Query: 325 SGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
SG+P +A++LF PN +T +VL+A + + +L G+ VH + G + D
Sbjct: 246 SGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDA 305
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------LD-------D 424
N+LV+MYAKC I +AR +F+ ++ V++W IIS LD +
Sbjct: 306 AAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSE 365
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V P+ +T SV+SAC+SLGA++ G ++HA G ++ V AL++ Y KCG S
Sbjct: 366 GVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGY-KPDLAVANALVSLYGKCGSVDS 424
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR VFD M+ +N V+W+AMI Y ++ L+ M E VQ + I+ T+L+ACS
Sbjct: 425 ARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQ 484
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G++ F + RD ++ YVCM +L RAGRL EA E + MP E + +
Sbjct: 485 AGLLESARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWM 544
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
L C ++ + G + + + L P YVL+SN+Y + GR +VR M
Sbjct: 545 GLLAACKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKM 600
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 272/561 (48%), Gaps = 55/561 (9%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
NLL C + K H ++ +G N LV MY G ++ A+ VFD M D
Sbjct: 75 NLLRDCGELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSI 134
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL--RDIDEGMKVHC 170
S+ MI Y + L ++ ++ YK M + D F FS VL AC L R ++ G ++H
Sbjct: 135 SWSKMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEIHA 191
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+ ++ PD FV + LV M+AKC + SR+VFD+ K+V+ W SMI Y Q+ +E
Sbjct: 192 HMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPRE 251
Query: 230 GLVLFNRMREGF--VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ LF M VE N IT +++ AC+ + L QGK +H ++ G + ++ +L
Sbjct: 252 AIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAENSL 311
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++MY KCG+I +AR VFD + +VSWT +I Y + G+P +AL L+ PN
Sbjct: 312 VNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEPNG 371
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
+T ASVLSA + LG L G+ VH+ G + D V NALV +Y KC + AR +F+
Sbjct: 372 ITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVFDR 431
Query: 407 TSEKDVIAWNSIISGLDDNV-SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
++V++W ++IS + S +A+ L + +G+ +S+
Sbjct: 432 MKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDL-------------------EGVQASS 472
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAM--------REKNTVTWSAMIGGYGMQGDGGGSL 517
GT +L ++ G +SAR F + + ++ V + ++G G L
Sbjct: 473 FIYGT-VLTACSQAGLLESARHYFGCLTRDCGAPAKLEDYVCMATVLG-------RAGRL 524
Query: 518 ALFSDMLNEEVQPNEVIFTT---ILSACSHTGMVGEGWKCFYSMCRDFKFVP-SMKHYVC 573
A ++L V P E F +L+AC V G + + F+ P + YV
Sbjct: 525 AEAEELL--AVMPFEAEFVAWMGLLAACKAHNDVERGARVAEVL---FRLEPLNEAPYVL 579
Query: 574 MVDLLARAGRLEEALEFMENM 594
+ ++ AGR EEA M
Sbjct: 580 LSNIYVAAGRQEEAARVRRKM 600
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 16/268 (5%)
Query: 12 SRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSL---KAF 68
S++ P+ + F +P T+ + +L C + L K
Sbjct: 244 SQSGHPREAIELFKSMGSSSPPVEPNAITYTT-----------VLAACSAVEDLEQGKEV 292
Query: 69 HALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H ++ G D LV+MY G + AR VFD M S+ +I Y
Sbjct: 293 HRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHP 352
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++ ++ Y+ M E + F+ VL AC L ++EG VH ++ G PD V L
Sbjct: 353 REALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANAL 412
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
V +Y KC + S+R+VFD +NVVSWT+MI+ Y + ++E + L+ M V+ +
Sbjct: 413 VSLYGKCGSVDSARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASS 472
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILK 274
G+++TAC++ L + G + +
Sbjct: 473 FIYGTVLTACSQAGLLESARHYFGCLTR 500
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 315 bits (808), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 187/570 (32%), Positives = 296/570 (51%), Gaps = 60/570 (10%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
+L +C +R+I + +H I+K S T + + + C I S Q D
Sbjct: 32 LLSSCKSVREIKQ---IHASIIKANTTRS---TTTLPIISLCTKITSLLQQDVHLADSIQ 85
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI---------------------TLG 250
W A + N C Q + +FN + + N TL
Sbjct: 86 NLW---YASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLP 142
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
L+ AC++ A + +H + +K G+ N + L+ Y G I VFD+
Sbjct: 143 YLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHW 202
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV- 369
DL+SWT +I Y++ GYP +A+ F + +T+ VLSA +QLG+ +G+ +
Sbjct: 203 DLISWTTLIQAYSKMGYPSEAIAAFFRMNCT---ADRMTLVVVLSACSQLGDFTLGKKIL 259
Query: 370 -----HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
H + D + NAL+DMY KC AR +F K++++WNS+ISGL
Sbjct: 260 AYMDHHLFDVH---SDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAH 316
Query: 425 N-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+ PD+VTLV V+++CA+LG +++G +H+Y K + ++ Y
Sbjct: 317 QGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHM-KADGY 375
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V AL++ YAKCG A MVF AM+ K+ +++AMI G+ M G +LA+FS+M
Sbjct: 376 VANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMG 435
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
V+P+ V +LSACSH G++ EG + F M R + P +HY CMVDLL RAG + EA
Sbjct: 436 VRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEA 495
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
F MPI PD S++G+ L C ++++ +LGE +I+K++E+ P++ Y+L+SN+Y+S
Sbjct: 496 EAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAYILMSNIYSSA 555
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
RW + R+ MKQ + K+PGCS +++D
Sbjct: 556 NRWRDALKWRKAMKQNNIKKTPGCSSIEVD 585
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 209/444 (47%), Gaps = 42/444 (9%)
Query: 42 ASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVS------------- 88
A+FH P L LL CKS +K HA +I T ++S
Sbjct: 22 ANFHEFPQ---LLLLSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQDV 78
Query: 89 -MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL-NDLYKDIVEFYKCMRKRLKEHDN 146
+ S ++ YA S+ + Y F +I+ N+ + I Y+ M D
Sbjct: 79 HLADSIQNLWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDT 138
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
+ +LKAC + E +++H +K G + FV L+ YA I + +VFD+
Sbjct: 139 YTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQ 198
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
+++SWT++I Y + E + F RM +++TL +++AC++L G
Sbjct: 199 GPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMN---CTADRMTLVVVLSACSQLGDFTLG 255
Query: 266 KWLHGYILKIGIEINSH--LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
K + Y+ +++S L ALLDMY+KCG AR +F + +LVSW +MI G
Sbjct: 256 KKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLA 315
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
G +AL +F + P+ VT+ VL++ A LG+L +G+ VHS + ++ D
Sbjct: 316 HQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGY 375
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
V NALVDMYAKC I A +F+ KDV ++ ++I G +
Sbjct: 376 VANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMG 435
Query: 426 VSPDAVTLVSVISACASLGAVQVG 449
V PD VTLV V+SAC+ G ++ G
Sbjct: 436 VRPDHVTLVGVLSACSHAGLLEEG 459
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 1/182 (0%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY G AR +F MP + S+ MI L+K+ + ++ M+ + D
Sbjct: 279 LLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPD 338
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ VL +C L D++ G VH I K D +V LVDMYAKC I + VF
Sbjct: 339 SVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQ 398
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
K+V S+T+MI G+ + A L +F+ M V + +TL +++AC+ L +
Sbjct: 399 AMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEE 458
Query: 265 GK 266
G+
Sbjct: 459 GR 460
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 294/546 (53%), Gaps = 31/546 (5%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
+L+ C + E +H IVK G D FV+T LV++Y+KC + S+ +VFD +N
Sbjct: 70 LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 129
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
V +WT+++ GYVQN L LF +M E + TLG ++ AC+ L+++ GK +H
Sbjct: 130 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 189
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
Y++K I+ ++ + +L Y K + A F + D++SWT++I +G +
Sbjct: 190 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 249
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVD 389
+L F D PN T+ SVLSA + L++G +HSL I+LG +I N+++
Sbjct: 250 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 309
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISG-------LDDNVS--------------- 427
+Y KC + +A+ +FE +++ WN++I+G +D+V+
Sbjct: 310 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 369
Query: 428 ------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
PD T SV+S C++L A++ G +H K G+L+ +V VGTAL++ Y KCG
Sbjct: 370 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLA-DVVVGTALVSMYNKCGS 428
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A F M + ++W++MI G+ G +L LF DM ++PN+V F +LSA
Sbjct: 429 IDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSA 488
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH G+ E F M + + P M H+ C++D+ R GR+EEA + + M EP+ +
Sbjct: 489 CSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNET 548
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ + GC + + DLG +++L+L P YV + N++ S GRW V++VR+LMK
Sbjct: 549 IWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMK 608
Query: 662 QRGLSK 667
+ + K
Sbjct: 609 EEKVGK 614
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 226/502 (45%), Gaps = 38/502 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H ++ G D T LV++Y G ++ A VFD++P + ++ ++ Y N
Sbjct: 84 RMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQN 143
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
++ + M + N+ VL AC L+ I+ G +VH ++K D+ +
Sbjct: 144 SHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIG 203
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L Y+K R + + + F +K+V+SWTS+I+ N A L F M ++
Sbjct: 204 NSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMK 263
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N+ TL S+++AC + L G +H +K+G + + +++ +Y+KCG + +A+ +
Sbjct: 264 PNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKL 323
Query: 304 FDELCSIDLVSWTAMIVGYT-------------QSGYPDKALKLFTDKKWADFFPNHVTI 350
F+ + +++LV+W AMI G+ +SG AL +F + P+ T
Sbjct: 324 FEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG--STALAMFQKLYRSGMKPDLFTF 381
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSE 409
+SVLS + L L G +H I+ G L D V ALV MY KC I A F
Sbjct: 382 SSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS 441
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
+ +I+W S+I+G + + P+ VT V V+SAC+ G
Sbjct: 442 RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY 501
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQG 511
KQ + + L++ Y + G + A V M E N WS +I G +
Sbjct: 502 FELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIA--GCRS 559
Query: 512 DGGGSLALFSDMLNEEVQPNEV 533
G L ++ +++P +V
Sbjct: 560 HGKSDLGFYAAEQLLKLKPKDV 581
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 207/462 (44%), Gaps = 43/462 (9%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C S S+ K HA LI + D L S Y F +++A F + D
Sbjct: 171 VLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKD 230
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ +I N + F+ M + + + + VL ACC + +D G ++H
Sbjct: 231 VISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHS 290
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY------VQ 223
+K+G G + ++ +Y KC + ++++F+ N+V+W +MIAG+ +
Sbjct: 291 LSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAE 350
Query: 224 NDCAQE-----GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
+D A L +F ++ ++ + T S+++ C+ L AL QG+ +HG I+K G+
Sbjct: 351 DDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 410
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ + TAL+ MY KCG+I A F E+ S ++SWT+MI G+ + G +AL+LF D
Sbjct: 411 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDM 470
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAK 393
+ PN VT VLSA + G + M I+ ++ + L+DMY +
Sbjct: 471 RLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFA---CLIDMYLR 527
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
+ +A F+ + N P+ +I+ C S G +G +
Sbjct: 528 LGRVEEA---FDVVHKM--------------NFEPNETIWSMLIAGCRSHGKSDLG--FY 568
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
A L +V +LLN + G + V M+E+
Sbjct: 569 AAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEE 610
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 17/186 (9%)
Query: 43 SFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARS 101
+F S+ S+ C NL+ L + + H +I G+ D T LVSMY G + A
Sbjct: 380 TFSSVLSV-CSNLVALEQG----EQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASK 434
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
F MP+ S+ MI + + L + ++ ++ MR + + F VL AC
Sbjct: 435 AFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGL 494
Query: 162 IDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD----ETLDKNVVSW 214
DE + + E+++ P L+DMY + +G + FD + N W
Sbjct: 495 ADEAL-YYFELMQKQYNIKPVMDHFACLIDMYLR---LGRVEEAFDVVHKMNFEPNETIW 550
Query: 215 TSMIAG 220
+ +IAG
Sbjct: 551 SMLIAG 556
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/481 (36%), Positives = 268/481 (55%), Gaps = 25/481 (5%)
Query: 217 MIAGYVQNDCAQEGLVLFN-RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
+I+GY ++++ +R GFV + T +++ +CAK + + + H +K
Sbjct: 80 LISGYASGQLPWLAILIYRWTVRNGFVP-DVYTFPAVLKSCAKFSGIGEVRQFHSVSVKT 138
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G+ + ++ L+ +Y CG+ A VF+++ D+VSWT +I GY ++G ++A+ LF
Sbjct: 139 GLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLFNEAISLF 198
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LGLEDYTVINALVDMYAKC 394
+ PN T S+L A +LG LN+G+ +H L + L E+ V NA++DMY KC
Sbjct: 199 LR---MNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNAVLDMYMKC 255
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVI 437
+ DAR +F+ EKD+I+W S+I GL PD V L SV+
Sbjct: 256 DSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVILTSVL 315
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
SACASLG + G +H Y + +V++GT L++ YAKCG A+ +F+ M KN
Sbjct: 316 SACASLGLLDCGRWVHEYIDCH-RIKWDVHIGTTLVDMYAKCGCIDMAQRIFNGMPSKNI 374
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYS 557
TW+A IGG + G G +L F D++ +PNEV F + +AC H G+V EG K F
Sbjct: 375 RTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDEGRKYFNE 434
Query: 558 MCRD-FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
M + P ++HY CMVDLL RAG + EA+E ++ MP+ PDV + GA L Y
Sbjct: 435 MTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGALLSSRNTYGNV 494
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ M+K + + + YVL+SNLYA++ +W V VR LMKQ+G+SK+PG S++ +
Sbjct: 495 GFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRRLMKQKGISKAPGSSIIRV 554
Query: 677 D 677
D
Sbjct: 555 D 555
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 142/421 (33%), Positives = 206/421 (48%), Gaps = 29/421 (6%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L+L+ C S K HA L+ L TND TK + G H+ + + D+
Sbjct: 13 LDLIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGK--HITDVHYPCNFLKQFDW 70
Query: 112 ----YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ ++I Y L + Y+ + D + F VLK+C + I E +
Sbjct: 71 SLSSFPCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQ 130
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
H VK G D +V LV +Y+ C D + +VF++ L ++VVSWT +I+GYV+
Sbjct: 131 FHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGL 190
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E + LF RM VE N T S++ AC KL L+ GK +HG + K + A
Sbjct: 191 FNEAISLFLRMN---VEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELVVCNA 247
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
+LDMY+KC ++ DAR +FDE+ D++SWT+MI G Q P ++L LF+ + + F P+
Sbjct: 248 VLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPD 307
Query: 347 HVTIASVLSASAQLGNLNMGRMVHS-LGIRLGLEDYTVINALVDMYAKCHVIADARYIFE 405
V + SVLSA A LG L+ GR VH + D + LVDMYAKC I A+ IF
Sbjct: 308 GVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQRIFN 367
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
K++ WN+ I GL N P+ VT ++V +AC G V
Sbjct: 368 GMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNGLVDE 427
Query: 449 G 449
G
Sbjct: 428 G 428
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 208/441 (47%), Gaps = 33/441 (7%)
Query: 63 GSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
G ++ FH++ + GL D LV +Y G A VF+ M D S+ +I Y
Sbjct: 126 GEVRQFHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGY 185
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDS 180
L+ + + + M E + F +L AC +L ++ G +H + K + G +
Sbjct: 186 VKTGLFNEAISLFLRMNV---EPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEEL 242
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
V ++DMY KC + +R++FDE +K+++SWTSMI G VQ +E L LF++M+
Sbjct: 243 VVCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQAS 302
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
E + + L S+++ACA L L G+W+H YI I+ + H+ T L+DMY KCG I A
Sbjct: 303 GFEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMA 362
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+ +F+ + S ++ +W A I G +GY +ALK F D + PN VT +V +A
Sbjct: 363 QRIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHN 422
Query: 361 GNLNMGR-----MVHSL-GIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
G ++ GR M L + LE Y +VD+ + ++ +A + +T
Sbjct: 423 GLVDEGRKYFNEMTSPLYNLSPCLEHY---GCMVDLLCRAGLVGEAVELIKTMP------ 473
Query: 415 WNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+ PD L +++S+ + G V + S +YV L N
Sbjct: 474 -----------MPPDVQILGALLSSRNTYGNVGFTQEMLKSLPNVEFQDSGIYV--LLSN 520
Query: 475 FYAKCGDAQSARMVFDAMREK 495
YA R V M++K
Sbjct: 521 LYATNKKWAEVRSVRRLMKQK 541
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 165/376 (43%), Gaps = 57/376 (15%)
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVS------------------------------WT 316
LLD+ KC ++R + + L + LV+ W+
Sbjct: 12 LLDLIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLKQFDWS 71
Query: 317 -------AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+I GY P A+ ++ F P+ T +VL + A+ + R
Sbjct: 72 LSSFPCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIGEVRQF 131
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------- 421
HS+ ++ GL D V N LV +Y+ C A +FE +DV++W +ISG
Sbjct: 132 HSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYVKTGLF 191
Query: 422 -------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
L NV P+ T VS++ AC LG + +G +H K L + V A+L+
Sbjct: 192 NEAISLFLRMNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFK-CLYGEELVVCNAVLD 250
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y KC AR +FD M EK+ ++W++MIGG SL LFS M +P+ VI
Sbjct: 251 MYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASGFEPDGVI 310
Query: 535 FTTILSACSHTGMVGEG-WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
T++LSAC+ G++ G W Y C K+ + +VD+ A+ G ++ A
Sbjct: 311 LTSVLSACASLGLLDCGRWVHEYIDCHRIKW--DVHIGTTLVDMYAKCGCIDMAQRIFNG 368
Query: 594 MPIEPDVSLFGAFLHG 609
MP ++ + A++ G
Sbjct: 369 MP-SKNIRTWNAYIGG 383
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 327/617 (52%), Gaps = 30/617 (4%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N + + MY GHV+ A +F + D ++ +I Y N+ + KC+
Sbjct: 173 NSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNN---ESGRGLKCLF 229
Query: 139 K--RLKEHDNF-VFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCR 194
+ R+ N+ +AC +L + EG +H +K G V + ++ MY++C
Sbjct: 230 EMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCG 289
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
+ + F + K+++SWTS+IA + + E L LF M+ + ++I + ++
Sbjct: 290 SPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLM 349
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
+ +GK H ILK ++ ALL MY K G++ A +F
Sbjct: 350 GFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSS-ED 408
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W+ MI+GY+ G +K + + P+ ++ SV+S+ +Q+G +N+GR +H I
Sbjct: 409 WSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAI 468
Query: 375 RLGL-EDYTVINALVDMYAKC-HVIADARYIFETTSEKDVIAWNSIISG----------- 421
+ + E+ +V N+L+DMY K HV A R IF T ++DVI+WN++IS
Sbjct: 469 KNSIIENVSVANSLMDMYGKSGHVTATWR-IFHRTLQRDVISWNTLISSYKQSGILAEAI 527
Query: 422 ------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ + V P+ VT + V+SACA L ++ G +H Y + G SN+ + TAL++
Sbjct: 528 ILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGF-ESNITIRTALIDM 586
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
YAKCG+ +++R +F++ E++ + W+ MI YGM G ++ +F M ++PN F
Sbjct: 587 YAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTF 646
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
++LSAC+HTG V EG F M + + PS+KHY ++DLL R+G LE A + +MP
Sbjct: 647 LSLLSACNHTGHVLEGRHLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMP 705
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
I PD +++G+ L C +++ F++G + + +E P YY+++S+LY+ GRW V +
Sbjct: 706 ITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEK 765
Query: 656 VRELMKQRGLSKSPGCS 672
VR++MK+RG+ K G S
Sbjct: 766 VRDMMKKRGVEKRAGWS 782
Score = 252 bits (644), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 191/692 (27%), Positives = 332/692 (47%), Gaps = 45/692 (6%)
Query: 13 RTKKPKLQLRF-FSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHAL 71
R + + +RF FS T H + SF S P++ +LL FH+L
Sbjct: 13 RLRLSQFHIRFAFSSTFTSLSDSHYPNNCLHSFFSKPNLTFQSLL----------QFHSL 62
Query: 72 LIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDI 130
+I G +N+ TKL++ Y ++ +F + + D + + +I+ +F N Y+
Sbjct: 63 IITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRA 122
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVD 188
+FY MR + F V+ C EL + GM +H K+G +S + + +
Sbjct: 123 FDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIY 182
Query: 189 MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL-VLFNRMREGFVEGNQI 247
MY+KC + S+ +F E K+VV+WT++I GYVQN+ + GL LF R G N
Sbjct: 183 MYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTP-NYK 241
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T+GS AC L AL +GK LHG LK G + + +L MY +CG+ +A F +L
Sbjct: 242 TIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKL 301
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
DL+SWT++I +++ G + L LF + + ++ P+ + I+ +L + G+
Sbjct: 302 DQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGK 361
Query: 368 MVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD- 424
H+ ++ L T NAL+ MY K + A IF + K W+++I G +
Sbjct: 362 AFHARILKQCCALSGITH-NALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILGYSNM 419
Query: 425 ----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
PD +LVSVIS+C+ +GA+ +G S+H Y+ K ++ NV V
Sbjct: 420 GQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSII-ENVSV 478
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+L++ Y K G + +F +++ ++W+ +I Y G ++ LF M+ E+V
Sbjct: 479 ANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKV 538
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
PN+V +LSAC+H + EG K + ++ F ++ ++D+ A+ G LE +
Sbjct: 539 YPNKVTCIIVLSACAHLASLDEGEK-IHQYIKENGFESNITIRTALIDMYAKCGELETSR 597
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYAS 646
+ N E DV L+ + G++ + + + M E + P+ + L+S +
Sbjct: 598 KLF-NSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHT 656
Query: 647 DGRWIRVNQVRELMKQRGLSKSPG--CSLVDL 676
G + + + M++ G+ S S++DL
Sbjct: 657 -GHVLEGRHLFDRMQKYGIEPSLKHYASIIDL 687
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 215/451 (47%), Gaps = 40/451 (8%)
Query: 66 KAFHALLI-----VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW 120
KAFHA ++ + G+T++ L+SMY FGH+ A +F S + MI
Sbjct: 361 KAFHARILKQCCALSGITHNA----LLSMYCKFGHLGTANKIFHSFHKSS-EDWSTMILG 415
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
Y + + F + M +E D V+ +C ++ I+ G +HC +K ++
Sbjct: 416 YSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIEN 475
Query: 181 F-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
V L+DMY K + ++ ++F TL ++V+SW ++I+ Y Q+ E ++LF++M +
Sbjct: 476 VSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVK 535
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
V N++T +++ACA L +L +G+ +H YI + G E N + TAL+DMY KCG +
Sbjct: 536 EKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELET 595
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
+R +F+ D++ W MI Y G+ + A+++F + ++ PN T S+LSA
Sbjct: 596 SRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNH 655
Query: 360 LGNLNMGRMV----HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
G++ GR + GI L+ Y +++D+ + + A +
Sbjct: 656 TGHVLEGRHLFDRMQKYGIEPSLKHYA---SIIDLLGRSGSLEAAEALV----------- 701
Query: 416 NSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
L ++PD S++SAC +VG L Y+ + + Y+ L +
Sbjct: 702 ------LSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYI--ILSDL 753
Query: 476 YAKCGDAQSARMVFDAMREKNT---VTWSAM 503
Y+ G V D M+++ WSA+
Sbjct: 754 YSCLGRWDEVEKVRDMMKKRGVEKRAGWSAL 784
>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Glycine max]
Length = 673
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 178/544 (32%), Positives = 296/544 (54%), Gaps = 19/544 (3%)
Query: 137 MRKRLKEHDN--FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKC 193
+RK L N V + K + DI VH ++ + ++ L L+ YA
Sbjct: 21 IRKSLVSPQNPVLVLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSLGIKLMRAYAAR 80
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLV 253
+ G +R VFD ++NV+ + MI Y+ N + L++F M G + T ++
Sbjct: 81 GEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVL 140
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
AC+ L G LHG + K+G+++N + L+ +Y KCG + +AR V DE+ S D+V
Sbjct: 141 KACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVV 200
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
SW +M+ GY Q+ D AL + + P+ T+AS+L A + N+ V +
Sbjct: 201 SWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSENV-LYVEEMF 259
Query: 374 IRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTL 433
+ L + N ++ +Y K + + ++ + + V PDA+T
Sbjct: 260 MNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCE--------------VEPDAITC 305
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
SV+ AC L A+ +G +H Y ++ L N+ + +L++ YA+CG + A+ VFD M+
Sbjct: 306 ASVLRACGDLSALLLGRRIHEYVERKK-LCPNMLLENSLIDMYARCGCLEDAKRVFDRMK 364
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
++ +W+++I YGM G G ++ALF++M N P+ + F ILSACSH+G++ EG
Sbjct: 365 FRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKF 424
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F M D+K P ++H+ C+VDLL R+GR++EA ++ MP++P+ ++GA L C +Y
Sbjct: 425 YFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLSSCRVY 484
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
S D+G + K+L+L P+++ YYVL+SN+YA GRW V +R LMK+R + K PG S
Sbjct: 485 SNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIRSLMKRRRIRKMPGISN 544
Query: 674 VDLD 677
V+L+
Sbjct: 545 VELN 548
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 185/417 (44%), Gaps = 78/417 (18%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N KL+ Y + G AR+VFD +P + + VMIR Y N LY D + ++ M
Sbjct: 66 NPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMV 125
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMY------- 190
D++ + VLKAC ++ G+++H + KVG + FV GL+ +Y
Sbjct: 126 SGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLP 185
Query: 191 -AKC-------RDIGS---------SRQVFDETLD------------------------- 208
A+C +D+ S FD+ LD
Sbjct: 186 EARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVT 245
Query: 209 -------------------KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
K++VSW MI+ Y++N + + L+ +M + VE + IT
Sbjct: 246 NTSSENVLYVEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITC 305
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
S++ AC L AL G+ +H Y+ + + N L +L+DMY +CG + DA+ VFD +
Sbjct: 306 ASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKF 365
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-- 367
D+ SWT++I Y +G A+ LFT+ + + P+ + ++LSA + G LN G+
Sbjct: 366 RDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFY 425
Query: 368 ---MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIIS 420
M I +E + LVD+ + + +A I + K + W +++S
Sbjct: 426 FKQMTDDYKITPIIEHFA---CLVDLLGRSGRVDEAYNIIKQMPMKPNERVWGALLS 479
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 213/699 (30%), Positives = 339/699 (48%), Gaps = 54/699 (7%)
Query: 33 TQH-ELDQTFASFHSLP-------SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK 81
T+H + + FH + ++ L +L C G L ++ HA ++ GL
Sbjct: 104 TEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKS 163
Query: 82 CNTKLV-SMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
L+ +YGS G V A +F+ M D S+ I + +E ++ M+
Sbjct: 164 VLANLLLHIYGSCGCVASAMLLFEKMER-DLVSWNAAIAANAQSGDLGIALELFQRMQLE 222
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSS 199
L C +R + +H + + G + V+ T L YA+ + +
Sbjct: 223 GVRPARITLVIALTVCATIR---QAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQA 279
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
++VFD +++VVSW +M+ Y Q+ E +LF RM + +++TL + T C+ L
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSL 339
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
R G+ +HG L+ G++ + L ALLDMY +CG+ +AR +F + + VSW MI
Sbjct: 340 RF---GRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRI-PCNAVSWNTMI 395
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA----QLGNLNMGRMVHSLGIR 375
G +Q G +A++LF + P T ++L A A + + GR +HS +
Sbjct: 396 AGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVS 455
Query: 376 LGLEDYTVI-NALVDMYAKCHVIADARYIFETTS---EKDVIAWNSIISGLDDN------ 425
G I A+V MYA C I +A F+ + DV++WN+IIS L +
Sbjct: 456 CGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRA 515
Query: 426 -----------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
V+P+ +T V+V+ ACA A+ G +H + G+ SN++V TAL +
Sbjct: 516 LGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGM-ESNLFVATALAS 574
Query: 475 FYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
Y +CG +SAR +F+ + E++ V ++AMI Y G G +L LF M E +P+E
Sbjct: 575 MYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQ 634
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F ++LSACSH G+ EGW+ F SM + + PS HY C VD+L RAG L +A E +
Sbjct: 635 SFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRC 694
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M ++P V ++ L C Y D G + + EL P YV++SN+ A G+W
Sbjct: 695 MDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEA 754
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSR 686
+VR M+ RGL K G S +++ +A D S R
Sbjct: 755 AEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPR 793
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 160/568 (28%), Positives = 266/568 (46%), Gaps = 37/568 (6%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+ HA ++ GL + N L+ +Y + VF + D S+ +I Y +
Sbjct: 49 RRIHARIVSLGLEEELGN-HLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHG 107
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG 185
K + + M++ D F VLKAC L D+ +G +H IV+ G VL
Sbjct: 108 QAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLAN 167
Query: 186 -LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ +Y C + S+ +F E +++++VSW + IA Q+ L LF RM+ V
Sbjct: 168 LLLHIYGSCGCVASAMLLF-EKMERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRP 226
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ITL +T CA +R Q + +H + + G+E + TAL Y + G++ A+ VF
Sbjct: 227 ARITLVIALTVCATIR---QAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVF 283
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D D+VSW AM+ Y Q G+ +A LF P+ VT+ ++AS +L
Sbjct: 284 DRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL---VNASTGCSSLR 340
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
GRM+H + GL+ D + NAL+DMY +C +AR++F+ + ++WN++I+G
Sbjct: 341 FGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGSS 399
Query: 424 -----------------DNVSPDAVTLVSVISACAS----LGAVQVGSSLHAYSTKQGLL 462
+ ++P T ++++ A AS A+ G LH+ G
Sbjct: 400 QKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCG-Y 458
Query: 463 SSNVYVGTALLNFYAKCG--DAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLAL 519
+S +GTA++ YA CG D +A AM ++ + V+W+A+I G G +L
Sbjct: 459 ASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGF 518
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M V PN++ +L AC+ + EG + + R ++ + +
Sbjct: 519 FRRMDLHGVAPNQITCVAVLDACAGAAALTEG-EIVHDHLRHSGMESNLFVATALASMYG 577
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFL 607
R G LE A E E + +E DV +F A +
Sbjct: 578 RCGSLESAREIFEKVAVERDVVIFNAMI 605
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 243/502 (48%), Gaps = 45/502 (8%)
Query: 151 KVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
++L+A + R + +G ++H IV +G + L+ +Y KC +G +VF ++
Sbjct: 34 RLLRAAGDDRLLSQGRRIHARIVSLGLEEELG-NHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
SWT++I Y ++ A+ + +F+RM++ V + +T +++ ACA+L L QG+ +H
Sbjct: 93 EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+I++ G++ S L LL +Y CG + A +F+++ DLVSW A I QSG
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGI 211
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVD 389
AL+LF + P +T+ L+ A + + +H + GLE V++ AL
Sbjct: 212 ALELFQRMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVSTALAS 268
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVT 432
YA+ + A+ +F+ +E+DV++WN+++ L + +SP VT
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
LV+ + C+SL + G +H + ++G L ++ +G ALL+ Y +CG + AR +F +
Sbjct: 329 LVNASTGCSSL---RFGRMIHGCALEKG-LDRDIVLGNALLDMYTRCGSPEEARHLFKRI 384
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS----HTGMV 548
N V+W+ MI G +G ++ LF M E + P + +L A + +
Sbjct: 385 -PCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP--DVSLFGAF 606
EG K +S + +V + A G ++EA + +E DV + A
Sbjct: 444 AEGRK-LHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAI 502
Query: 607 L-----HG-----CGLYSRFDL 618
+ HG G + R DL
Sbjct: 503 ISSLSQHGHGKRALGFFRRMDL 524
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 29/308 (9%)
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
P H + +L A+ L+ GR +H+ + LGLE+ + N L+ +Y KC + D +F
Sbjct: 29 PAH--LVRLLRAAGDDRLLSQGRRIHARIVSLGLEE-ELGNHLLRLYLKCESLGDVEEVF 85
Query: 405 ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQ 447
+D +W +II+ ++ V DAVT ++V+ ACA LG +
Sbjct: 86 SRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLS 145
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G S+HA+ + GL +V + LL+ Y CG SA ++F+ M E++ V+W+A I
Sbjct: 146 QGRSIHAWIVESGLKGKSV-LANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAAN 203
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GD G +L LF M E V+P + L+ C+ + + + R+ +
Sbjct: 204 AQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQA----QAIHFIVRESGLEQT 259
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+ + AR G L +A E + E DV + A L + ++ +ML
Sbjct: 260 LVVSTALASAYARLGHLYQAKEVFDRAA-ERDVVSWNAMLGAYAQHGHMSEAALLFARML 318
Query: 628 E--LHPDK 633
+ P K
Sbjct: 319 HEGISPSK 326
>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 660
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 165/493 (33%), Positives = 293/493 (59%), Gaps = 19/493 (3%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEG 244
L+ +YA C + G +R +FDE DKNVV + MI YV N ++ L+++ M +GFV
Sbjct: 60 LMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVP- 118
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ T ++ A ++ +L G +HG +LKIG+++N ++ L+ MY KC ++++A+ V
Sbjct: 119 DMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVL 178
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
DE+ D+VSW +M+ Y Q+G + AL+L + + + PN T+AS+L A + N
Sbjct: 179 DEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTTSDN 238
Query: 365 MGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD 424
+ V + ++L + N ++ MY + +A ++ +
Sbjct: 239 V-LYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEA--------------N 283
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V PD V++VSV+ A L A+ +G +H ++ ++ LL N+ + AL++ YAKCG +
Sbjct: 284 GVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLP-NLLLENALIDMYAKCGCLRD 342
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR VF+ M+ ++ V+W+++I YG G G ++A+F++M N + P+ + F ++L+ACSH
Sbjct: 343 ARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSH 402
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G++ +G + ++++ + P ++H+ C+VDLL RAG+++EA F+ MP+EPD ++G
Sbjct: 403 AGLLDDG-RYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWG 461
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
L C +YS ++G + K+L L+P+ + YYVL+SN+YA GRW V +R +M+++G
Sbjct: 462 PLLSACRVYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKG 521
Query: 665 LSKSPGCSLVDLD 677
+ K PG S V+L+
Sbjct: 522 IKKLPGISNVELN 534
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/556 (26%), Positives = 239/556 (42%), Gaps = 97/556 (17%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLT--NDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
C +L +LK H ++ D N KL+ +Y + G AR +FD + +
Sbjct: 24 CNRILDQYPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDK 83
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ F VMIR Y N LYKD + YK M + D + + VLKA + G+++H
Sbjct: 84 NVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIH 143
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
++K+G + +V GL+ MY KC+ + ++QV DE ++VVSW SM++ Y QN
Sbjct: 144 GAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFN 203
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L L M ++ N T+ SL+ A +
Sbjct: 204 DALELCREMEALNLKPNDCTMASLLPAVTNTTS--------------------------- 236
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
N+ + +F +L ++SW MI Y + P +A+ L++ + P+ V
Sbjct: 237 ------DNVLYVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVV 290
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETT 407
+I SVL A L L++GR VH R L + + NAL+DMYAKC + DAR +F
Sbjct: 291 SIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQM 350
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
+DV++W SIIS + ++PD++ VSV++AC+
Sbjct: 351 QFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACS--------- 401
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
HA GLL Y N A+CG ++ ++ G
Sbjct: 402 --HA-----GLLDDGRY----YFNLMAECGITPKLE------------HFACVVDLLGRA 438
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G + M ++P+E ++ +LSAC + G + D + + +H
Sbjct: 439 GKIDEAYGFIRQM---PLEPDERVWGPLLSACRVYSNMNIGI-----LAADKLLMLNPEH 490
Query: 571 ---YVCMVDLLARAGR 583
YV + ++ A+AGR
Sbjct: 491 SGYYVLLSNIYAKAGR 506
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 33/189 (17%)
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
LH L N VG L+ YA CG+ AR +FD + +KN V ++ MI Y
Sbjct: 40 LHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNH 99
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG---------------------MVGE 550
+L ++ M + P+ + +L A S + VG
Sbjct: 100 LYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGN 159
Query: 551 GWKCFYSMCRDFK-------FVP--SMKHYVCMVDLLARAGRLEEALEF---MENMPIEP 598
G Y C+ K +P + + MV + A+ GR +ALE ME + ++P
Sbjct: 160 GLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKP 219
Query: 599 DVSLFGAFL 607
+ + L
Sbjct: 220 NDCTMASLL 228
>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g26782, mitochondrial; Flags: Precursor
gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 177/504 (35%), Positives = 289/504 (57%), Gaps = 29/504 (5%)
Query: 202 VFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+F+ +DK +V SW S+IA ++ + E L+ F+ MR+ + + + + AC+ L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ GK H G + + + +AL+ MY CG + DAR VFDE+ ++VSWT+MI
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 321 GYTQSGYPDKALKLFTDKKWAD------FFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
GY +G A+ LF D + F + + + SV+SA +++ + +HS I
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 375 RLGLE-DYTVINALVDMYAKCHV--IADARYIFETTSEKDVIAWNSIIS-----GLDDN- 425
+ G + +V N L+D YAK +A AR IF+ +KD +++NSI+S G+ +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
V+ +A+TL +V+ A + GA+++G +H + GL +V VGT+++
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL-EDDVIVGTSII 329
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ Y KCG ++AR FD M+ KN +W+AMI GYGM G +L LF M++ V+PN +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
F ++L+ACSH G+ EGW+ F +M F P ++HY CMVDLL RAG L++A + ++
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M ++PD ++ + L C ++ +L E+ + ++ EL YY+L+S++YA GRW V
Sbjct: 450 MKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDV 509
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+VR +MK RGL K PG SL++L+
Sbjct: 510 ERVRMIMKNRGLVKPPGFSLLELN 533
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 201/393 (51%), Gaps = 41/393 (10%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F +KAC L DI G + H + G D FV + L+ MY+ C + +R+VFDE
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN---------QITLGSLVTACAK 258
+N+VSWTSMI GY N A + + LF + V+ N + L S+++AC++
Sbjct: 139 KRNIVSWTSMIRGYDLNGNALDAVSLFKDL---LVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN--IRDARSVFDELCSIDLVSWT 316
+ A + +H +++K G + + LLD Y K G + AR +FD++ D VS+
Sbjct: 196 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 317 AMIVGYTQSGYPDKALKLF---TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
+++ Y QSG ++A ++F K F N +T+++VL A + G L +G+ +H
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTF--NAITLSTVLLAVSHSGALRIGKCIHDQV 313
Query: 374 IRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------- 421
IR+GLED ++ +++DMY KC + AR F+ K+V +W ++I+G
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKAL 373
Query: 422 ------LDDNVSPDAVTLVSVISACASLG-AVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
+D V P+ +T VSV++AC+ G V+ +A + G+ + G +++
Sbjct: 374 ELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG-CMVD 432
Query: 475 FYAKCGDAQSARMVFDAMREK-NTVTWSAMIGG 506
+ G Q A + M+ K +++ WS+++
Sbjct: 433 LLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 201/403 (49%), Gaps = 35/403 (8%)
Query: 44 FHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYA 99
+ + S PC + C S + K H V G +D ++ L+ MY + G ++ A
Sbjct: 73 YPTRSSFPCA--IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDA 130
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF------SKVL 153
R VFD +P + S+ MIR Y LN D V +K + + D+ +F V+
Sbjct: 131 RKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRD--IGSSRQVFDETLDK 209
AC + +H ++K G D V G L+D YAK + + +R++FD+ +DK
Sbjct: 191 SACSRVPAKGLTESIHSFVIK-RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK 249
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+ VS+ S+++ Y Q+ + E +F R+ + V N ITL +++ A + AL GK +
Sbjct: 250 DRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCI 309
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H ++++G+E + + T+++DMY KCG + AR FD + + ++ SWTAMI GY G+
Sbjct: 310 HDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHA 369
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLG---------NLNMGRMVHSLGIRLGLE 379
KAL+LF + PN++T SVL+A + G N GR G+ GLE
Sbjct: 370 AKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGR----FGVEPGLE 425
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISG 421
Y +VD+ + + A + + K D I W+S+++
Sbjct: 426 HY---GCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 167/468 (35%), Positives = 276/468 (58%), Gaps = 27/468 (5%)
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
G +E + ++ C LR L QG+ +H +I E + L+ +L+MY KCG++ +
Sbjct: 99 GSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEE 158
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A+ +FD++ + D+VSWT +I GY+QSG +AL LF F PN T++S+L AS
Sbjct: 159 AQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGT 218
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+ + GR +H+ ++ G + + V ++L+DMYA+ + +A+ IF + + K+V++WN++
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 278
Query: 419 ISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I+G L P T SV+ ACAS G+++ G +HA+ K G
Sbjct: 279 IAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGG 337
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
Y+G L++ YAK G + A+ VF + +++ V+W+++I GY G G +L LF
Sbjct: 338 -QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFE 396
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
ML +VQPNE+ F ++L+ACSH+G++ EG + ++ + + K + H+V +VDLL RA
Sbjct: 397 QMLKAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELMKKHKIEAQVAHHVTVVDLLGRA 455
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
GRL EA +F+E MPI+P +++GA L C ++ DLG +++ EL P + +VL+S
Sbjct: 456 GRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLS 515
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFS 683
N+YAS GR +VR++MK+ G+ K P CS V+++ +AND S
Sbjct: 516 NIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDS 563
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 203/390 (52%), Gaps = 22/390 (5%)
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLV-DMYAKCRDIGSSRQ 201
E + ++SK+L C LR + +G +H I D VL + +MYAKC + ++
Sbjct: 102 EPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQD 161
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FD+ K++VSWT +I+GY Q+ A E L LF +M + N+ TL SL+ A +
Sbjct: 162 LFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPS 221
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
H G+ LH + LK G ++N H+ ++LLDMY + ++R+A+ +F+ L + ++VSW A+I G
Sbjct: 222 DHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAG 281
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
+ + G + ++LF F P H T +SVL A A G+L G+ VH+ I+ G +
Sbjct: 282 HARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPI 340
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
I N L+DMYAK I DA+ +F ++D+++WNSIISG L
Sbjct: 341 AYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK 400
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V P+ +T +SV++AC+ G + G K + + V +++ + G
Sbjct: 401 AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK-IEAQVAHHVTVVDLLGRAGRLN 459
Query: 484 SARMVFDAMREKNTVT-WSAMIGGYGMQGD 512
A + M K T W A++G M +
Sbjct: 460 EANKFIEEMPIKPTAAVWGALLGACRMHKN 489
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 177/338 (52%), Gaps = 6/338 (1%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+++MY G ++ A+ +FD MP D S+ V+I Y + + + + M + +
Sbjct: 146 ILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPN 205
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
F S +LKA G ++H +K G + V + L+DMYA+ + ++ +F+
Sbjct: 206 EFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALH 263
KNVVSW ++IAG+ + + + LF +M R+GF E T S V ACA +L
Sbjct: 266 SLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGF-EPTHFTYSS-VLACASSGSLE 323
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QGKW+H +++K G + +++ L+DMY K G+I+DA+ VF L D+VSW ++I GY
Sbjct: 324 QGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYA 383
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
Q G +AL+LF A PN +T SVL+A + G L+ G+ L + +E
Sbjct: 384 QHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVA 443
Query: 384 IN-ALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSII 419
+ +VD+ + + +A ++I E + W +++
Sbjct: 444 HHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALL 481
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 127/231 (54%), Gaps = 4/231 (1%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N + L+ MY + H++ A+ +F+S+ + S+ +I + + ++ + M
Sbjct: 240 NVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQML 299
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIG 197
++ E +F +S VL AC +++G VH ++K GG P +++ L+DMYAK I
Sbjct: 300 RQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIK 358
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+++VF + +++VSW S+I+GY Q+ E L LF +M + V+ N+IT S++TAC+
Sbjct: 359 DAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACS 418
Query: 258 KLRALHQGKWLHGYILKIGIEIN-SHLVTALLDMYVKCGNIRDARSVFDEL 307
L +G++ + K IE +H VT ++D+ + G + +A +E+
Sbjct: 419 HSGLLDEGQYYFELMKKHKIEAQVAHHVT-VVDLLGRAGRLNEANKFIEEM 468
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Query: 59 CKSTGSL---KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C S+GSL K HA +I G L+ MY G +K A+ VF + D S+
Sbjct: 316 CASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSW 375
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
+I Y + L + ++ ++ M K + + F VL AC +DEG + + E++K
Sbjct: 376 NSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG-QYYFELMK 434
Query: 175 VGGPDSFVL--TGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIAG 220
++ V +VD+ + + + + +E + W +++
Sbjct: 435 KHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGA 483
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 294/546 (53%), Gaps = 31/546 (5%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
+L+ C + E +H IVK G D FV+T LV++Y+KC + S+ +VFD +N
Sbjct: 64 LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRN 123
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
V +WT+++ GYVQN L LF +M E + TLG ++ AC+ L+++ GK +H
Sbjct: 124 VNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHA 183
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
Y++K I+ ++ + +L Y K + A F + D++SWT++I +G +
Sbjct: 184 YLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 243
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVD 389
+L F D PN T+ SVLSA + L++G +HSL I+LG +I N+++
Sbjct: 244 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 303
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISG-------LDDNVS--------------- 427
+Y KC + +A+ +FE +++ WN++I+G +D+V+
Sbjct: 304 LYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKL 363
Query: 428 ------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
PD T SV+S C++L A++ G +H K G+L+ +V VGTAL++ Y KCG
Sbjct: 364 YRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLA-DVVVGTALVSMYNKCGS 422
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A F M + ++W++MI G+ G +L LF DM ++PN+V F +LSA
Sbjct: 423 IDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSA 482
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH G+ E F M + + P M H+ C++D+ R GR+EEA + + M EP+ +
Sbjct: 483 CSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNET 542
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ + GC + + DLG +++L+L P YV + N++ S GRW V++VR+LMK
Sbjct: 543 IWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMK 602
Query: 662 QRGLSK 667
+ + K
Sbjct: 603 EEKVGK 608
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 226/502 (45%), Gaps = 38/502 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H ++ G D T LV++Y G ++ A VFD++P + ++ ++ Y N
Sbjct: 78 RMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRRNVNAWTTLLTGYVQN 137
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
++ + M + N+ VL AC L+ I+ G +VH ++K D+ +
Sbjct: 138 SHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIG 197
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L Y+K R + + + F +K+V+SWTS+I+ N A L F M ++
Sbjct: 198 NSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMK 257
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N+ TL S+++AC + L G +H +K+G + + +++ +Y+KCG + +A+ +
Sbjct: 258 PNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKL 317
Query: 304 FDELCSIDLVSWTAMIVGYT-------------QSGYPDKALKLFTDKKWADFFPNHVTI 350
F+ + +++LV+W AMI G+ +SG AL +F + P+ T
Sbjct: 318 FEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSG--STALAMFQKLYRSGMKPDLFTF 375
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSE 409
+SVLS + L L G +H I+ G L D V ALV MY KC I A F
Sbjct: 376 SSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS 435
Query: 410 KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
+ +I+W S+I+G + + P+ VT V V+SAC+ G
Sbjct: 436 RTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYY 495
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQG 511
KQ + + L++ Y + G + A V M E N WS +I G +
Sbjct: 496 FELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIA--GCRS 553
Query: 512 DGGGSLALFSDMLNEEVQPNEV 533
G L ++ +++P +V
Sbjct: 554 HGKSDLGFYAAEQLLKLKPKDV 575
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 207/463 (44%), Gaps = 43/463 (9%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C S S+ K HA LI + D L S Y F +++A F + D
Sbjct: 165 VLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKD 224
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ +I N + F+ M + + + + VL ACC + +D G ++H
Sbjct: 225 VISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHS 284
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY------VQ 223
+K+G G + ++ +Y KC + ++++F+ N+V+W +MIAG+ +
Sbjct: 285 LSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAE 344
Query: 224 NDCAQE-----GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
+D A L +F ++ ++ + T S+++ C+ L AL QG+ +HG I+K G+
Sbjct: 345 DDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL 404
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ + TAL+ MY KCG+I A F E+ S ++SWT+MI G+ + G +AL+LF D
Sbjct: 405 ADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDM 464
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAK 393
+ PN VT VLSA + G + M I+ ++ + L+DMY +
Sbjct: 465 RLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFA---CLIDMYLR 521
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
+ +A F+ + N P+ +I+ C S G +G +
Sbjct: 522 LGRVEEA---FDVVHKM--------------NFEPNETIWSMLIAGCRSHGKSDLG--FY 562
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
A L +V +LLN + G + V M+E+
Sbjct: 563 AAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEK 605
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 17/186 (9%)
Query: 43 SFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARS 101
+F S+ S+ C NL+ L + + H +I G+ D T LVSMY G + A
Sbjct: 374 TFSSVLSV-CSNLVALEQG----EQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASK 428
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
F MP+ S+ MI + + L + ++ ++ MR + + F VL AC
Sbjct: 429 AFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGL 488
Query: 162 IDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD----ETLDKNVVSW 214
DE + + E+++ P L+DMY + +G + FD + N W
Sbjct: 489 ADEAL-YYFELMQKQYNIKPVMDHFACLIDMYLR---LGRVEEAFDVVHKMNFEPNETIW 544
Query: 215 TSMIAG 220
+ +IAG
Sbjct: 545 SMLIAG 550
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 263/447 (58%), Gaps = 21/447 (4%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
S++T C A+ +G+ +H +++K E +L T L+ +Y KC + DAR V DE+
Sbjct: 15 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
++VSWTAMI GY+Q GY +AL LF + + PN T A+VL++ +GR +H
Sbjct: 75 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134
Query: 371 SLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----LDD 424
SL I+ E + + ++L+DMYAK I +AR +F+ E+DV++ +IISG LD+
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194
Query: 425 N------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
+ + VT SV++A + L A+ G +H++ + L V + +L
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR-AKLPFYVVLQNSL 253
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQPN 531
++ Y+KCG +R +FD+M E+ ++W+AM+ GY G G ++ LF M E +V+P+
Sbjct: 254 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 313
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFK-FVPSMKHYVCMVDLLARAGRLEEALEF 590
V F +LS CSH GM G + FY M F P ++HY C+VDL RAGR+EEA EF
Sbjct: 314 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 373
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
++ MP EP +++G+ L C ++ +GE + +++LE+ + A YV++SNLYAS GRW
Sbjct: 374 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 433
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDLD 677
V VRELMK++ + K PG S ++LD
Sbjct: 434 DDVRTVRELMKEKAVIKEPGRSWIELD 460
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 199/381 (52%), Gaps = 24/381 (6%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ VL C I EG +VH ++K P ++ T L+ +Y KCR +G +R+V DE
Sbjct: 13 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
++NVVSWT+MI+GY Q A E L LF M N+ T +++T+C G+
Sbjct: 73 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 132
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H ++K E + + ++LLDMY K G I +AR VFD L D+VS TA+I GY Q G
Sbjct: 133 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 192
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NA 386
++AL LF + N+VT ASVL+A + L L+ GR VHS +R L Y V+ N+
Sbjct: 193 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 252
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------------DDNVSP 428
L+DMY+KC + +R IF++ E+ VI+WN+++ G ++ V P
Sbjct: 253 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 312
Query: 429 DAVTLVSVISACASLGAVQVGSSL--HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D+VT ++V+S C+ G G + + K G + G +++ + + G + A
Sbjct: 313 DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG-CVVDLFGRAGRVEEAF 371
Query: 487 MVFDAMR-EKNTVTWSAMIGG 506
M E W +++G
Sbjct: 372 EFIKKMPFEPTAAIWGSLLGA 392
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 199/428 (46%), Gaps = 40/428 (9%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T+L+ +Y + AR V D MP + S+ MI Y + + + M
Sbjct: 49 TRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTA 108
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQV 202
+ F F+ VL +C G ++H ++K FV + L+DMYAK I +R+V
Sbjct: 109 PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRV 168
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD +++VVS T++I+GY Q +E L LF R++ + N +T S++TA + L AL
Sbjct: 169 FDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAAL 228
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +H ++L+ + L +L+DMY KCG++ +R +FD + ++SW AM+VGY
Sbjct: 229 DHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGY 288
Query: 323 TQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSL-GIR 375
++ G +A++LF K+ P+ VT +VLS + G + G MV+ G
Sbjct: 289 SKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFE 348
Query: 376 LGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV 434
+E Y + VD++ + + +A +I + E W S+
Sbjct: 349 PEIEHYGCV---VDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL---------------- 389
Query: 435 SVISACASLGAVQVGSSLH-AYSTKQGLL---SSNVYVGTALLNFYAKCGDAQSARMVFD 490
LGA +V ++H + LL S N L N YA G R V +
Sbjct: 390 --------LGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRE 441
Query: 491 AMREKNTV 498
M+EK +
Sbjct: 442 LMKEKAVI 449
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 174/505 (34%), Positives = 275/505 (54%), Gaps = 23/505 (4%)
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
D SR +F + NV SW M Y ++ E + L+N M + + ++
Sbjct: 76 DFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLK 135
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI--DL 312
ACA+L LH+G+ +H LK+G+ ++ + AL+ + CG + AR+VFD L ++ D+
Sbjct: 136 ACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDV 195
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKW-ADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
VSW +MI GY QS + ALK+F + P+ VT+ S LS +LG L++G+ +H
Sbjct: 196 VSWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHG 255
Query: 372 LGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----- 425
L G D V ++L+DMY+KC I DAR +F+ ++ + W S+I+G +
Sbjct: 256 LFTGSGFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKE 315
Query: 426 ------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
+ DA T+ V+SAC GA+ G +H Y + + ++ AL+
Sbjct: 316 AIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSI-EMDLNARNALI 374
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM-LNEEVQPNE 532
Y+KCGD Q A +F + + + +WSA+I G M G+ +L LFS M + +++PNE
Sbjct: 375 GMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNE 434
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
+ F +L AC+H G V +G F +M + + P ++HY CMVDLL RA L EA +F+
Sbjct: 435 ITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIR 494
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
+PI+PDV ++ + L C + +L E K++ EL P + VL+SN+YAS RW
Sbjct: 495 TLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGD 554
Query: 653 VNQVRELMKQRGLSKSPGCSLVDLD 677
V +VR+ M + + K PGCS V++D
Sbjct: 555 VKRVRKDMATQRIKKQPGCSFVEID 579
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 260/528 (49%), Gaps = 39/528 (7%)
Query: 56 LGLCKSTGSLKAFHALL---IVDGLTNDKC-NTKLVSMYGSFGH---VKYARSVFDSMPN 108
L L ++ ++F+ +L I G+ D ++KL +Y S H ++R++F +
Sbjct: 32 LSLLQNLSHPRSFNQILSHAIASGVFRDPVVSSKL--LYYSLSHDHDFAFSRTLFFQIHK 89
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
P+ +S+ M R Y + + + Y M + DN+ F VLKAC L + +G ++
Sbjct: 90 PNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREI 149
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQND 225
H +K+G D FV L+ ++ C + ++R VFD L ++VVSW SMI+GY+Q+
Sbjct: 150 HSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSH 209
Query: 226 CAQEGL-VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ L V + + +G + +++TL S ++ C +L L GK +HG G ++ +
Sbjct: 210 RYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVG 269
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
++L+DMY KCG I DAR VFD + + V WT+MI GY QS +A++LF + + F
Sbjct: 270 SSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFA 329
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
+ TIA VLSA G L GR +H R +E D NAL+ MY+KC I A I
Sbjct: 330 ADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEI 389
Query: 404 FETTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGA 445
F ++ D+ +W+++ISGL N + P+ +T + V+ AC G
Sbjct: 390 FHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGF 449
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG-DAQSARMVFDAMREKNTVTWSAMI 504
V G T+ L+ + +++ + ++ + + + + V W +++
Sbjct: 450 VDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLL 509
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPN----EVIFTTILSACSHTGMV 548
+ + G LA F+ EE++P V+ + + ++ S G V
Sbjct: 510 --FACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDV 555
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 213/727 (29%), Positives = 348/727 (47%), Gaps = 103/727 (14%)
Query: 61 STGSLKAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
STG K HA ++ +G N+ TKLV Y ++ A +F + + +S+ +
Sbjct: 67 STG--KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAI 124
Query: 118 IRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG 177
I L + + + M + DNFV V KAC L+ G VH ++K G
Sbjct: 125 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGL 184
Query: 178 PDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D FV + L DMY KC + +R+VFDE ++NVV+W +++ GYVQN +E + LF+
Sbjct: 185 EDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSD 244
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
MR+ VE ++T+ + ++A A + + +GK H + G+E+++ L T+LL+ Y K G
Sbjct: 245 MRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGL 304
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
I A VFD + D+V+W +I GY Q G + A+ + + + VT+++++SA
Sbjct: 305 IEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSA 364
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE--------------------------------DYTVI 384
+A+ NL G+ V IR L+ D +
Sbjct: 365 AARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILW 424
Query: 385 NALVDMYAKCHVIADA-RYIFETTSEK---DVIAWNSII--------------------- 419
N L+ YA+ + +A R +E E +VI WN II
Sbjct: 425 NTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQS 484
Query: 420 SGLDDNV-------------------------------SPDAVTLVSVISACASLGAVQV 448
SG+ N+ P+A ++ +SA A+L ++
Sbjct: 485 SGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHF 544
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G S+H Y + SS+V + T+L++ YAKCGD A VF + ++AMI Y
Sbjct: 545 GRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYA 604
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
+ G+ ++AL+ + + ++P+ V FT++LSAC+H G + + F +M P +
Sbjct: 605 LYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFTAMVLKHGMTPCL 664
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY MVDLLA AG E+A+ +E MP +PD + + + C + +L E + + +LE
Sbjct: 665 EHYGLMVDLLASAGETEKAIRLIEEMPYKPDARMIQSLVASCNKQHKTELVEYLSRHLLE 724
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD---------IA 679
P+ + YV +SN YA +G W V ++RE+MK +GL K PGCS + + +A
Sbjct: 725 SEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQIKGEEEGVHVFVA 784
Query: 680 NDFSFSR 686
ND + R
Sbjct: 785 NDXTHIR 791
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 247/468 (52%), Gaps = 23/468 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ + L+ C RD+ G ++H I+K G + ++ T LV YAKC + + +F
Sbjct: 52 IYGEXLQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFS 111
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NV SW ++I + + L+ F M E + + + ++ AC L+
Sbjct: 112 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRF 171
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY++K G+E + ++L DMY KCG + DAR VFDE+ ++V+W A++VGY Q
Sbjct: 172 GRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQ 231
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G ++A++LF+D + P VT+++ LSASA + + G+ H++ I GLE D +
Sbjct: 232 NGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNIL 291
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDDNV----------- 426
+L++ Y K +I A +F+ +KDV+ WN +ISG ++D +
Sbjct: 292 GTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKL 351
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VTL +++SA A ++ G + Y + L +++ + + ++ YAKCG A+
Sbjct: 352 KYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHS-LDTDIVLASTTMDMYAKCGSIVDAK 410
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD+ EK+ + W+ ++ Y G G +L LF +M E V PN + + I+ + G
Sbjct: 411 KVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 470
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
V E + F M + P++ + M++ + + G EEA+ F+ M
Sbjct: 471 EVNEAKEMFLQM-QSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKM 517
>gi|147771209|emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
Length = 598
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 179/573 (31%), Positives = 313/573 (54%), Gaps = 29/573 (5%)
Query: 131 VEFYKCMRKRLKEH----DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+ F+K + + +E+ D+FV++ ++KAC L I EG +HC +++ G + VL
Sbjct: 21 ISFFKAIPRNQRENAPLDDHFVYASLIKACNRLSAIREGRSIHCHVLRFGLDYNVNVLNA 80
Query: 186 LVDMYAKC-RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG---- 240
LV +Y+ + +G + +FD+ +K +V+ MI+G+V+N G+ LFNR+ G
Sbjct: 81 LVYLYSSAEKSMGCACALFDKIPEKTIVTVNCMISGFVKNKRFHAGVGLFNRVLGGGFDL 140
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
V+ N +TL L++ C + G LH Y K +++ + + AL+ +Y + + A
Sbjct: 141 RVKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSLDLKNEVRNALIHLYAEFEYMDAA 200
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F E DLVSW MI GY ++ A LF + + + + V++ S++SA
Sbjct: 201 AKLFHETNVRDLVSWNTMIAGYAKNNDCRNAFSLFREMRIGNVECDRVSLVSLISACTNX 260
Query: 361 GNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+L+MG+ VH+ G+E AL++MY+KC I R +F+ +++++ +WNS+I
Sbjct: 261 RDLHMGKAVHAFIKVSGMEMMIHFETALINMYSKCGSIELGRKVFDELADENIASWNSMI 320
Query: 420 SGLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
G + + PD VT++ +ISAC S G + G +++Y L
Sbjct: 321 YGYVECGFNIEALSLWNVIQSRKIKPDEVTMLGLISACRSSGDLHQGIQINSYIESSDHL 380
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S + + AL++ YAKCG A VF M ++ ++W+++I GY + G+G +L F
Sbjct: 381 SGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDVISWTSIIVGYAINGEGEEALLAFRK 440
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M E+++PN V F +LSAC H G+V +G + MC+ + P ++H CMVD+ ARAG
Sbjct: 441 MGAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYDIMCKYYHIEPKIEHCGCMVDMHARAG 500
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY-YVLVS 641
LEEA +F+++MP+EP+ ++ ++ C ++ F+LG ++ ++++ + +V+ S
Sbjct: 501 MLEEAYKFVKDMPVEPNAVVWRMLINACRVHGDFNLGLNLVSGLIDVKTEHGPEDHVISS 560
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
N++A GRW V Q R LM + K PG S +
Sbjct: 561 NIFAEAGRWDDVLQERSLMVAQKAVKLPGKSSI 593
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 181/353 (51%), Gaps = 17/353 (4%)
Query: 80 DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
++ L+ +Y F ++ A +F D S+ MI Y N+ ++ ++ MR
Sbjct: 181 NEVRNALIHLYAEFEYMDAAAKLFHETNVRDLVSWNTMIAGYAKNNDCRNAFSLFREMRI 240
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV--LTGLVDMYAKCRDIG 197
E D ++ AC RD+ G VH +KV G + + T L++MY+KC I
Sbjct: 241 GNVECDRVSLVSLISACTNXRDLHMGKAVHA-FIKVSGMEMMIHFETALINMYSKCGSIE 299
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
R+VFDE D+N+ SW SMI GYV+ E L L+N ++ ++ +++T+ L++AC
Sbjct: 300 LGRKVFDELADENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIKPDEVTMLGLISACR 359
Query: 258 KLRALHQGKWLHGYILKIGIEINSH------LVTALLDMYVKCGNIRDARSVFDELCSID 311
LHQG ++ Y IE + H L AL+DMY KCG++ A +VF ++ D
Sbjct: 360 SSGDLHQGIQINSY-----IESSDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRD 414
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
++SWT++IVGY +G ++AL F PN VT VLSA G ++ G+ ++
Sbjct: 415 VISWTSIIVGYAINGEGEEALLAFRKMGAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYD 474
Query: 372 LGIRLGLEDYTV--INALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISG 421
+ + + + +VDM+A+ ++ +A +++ + E + + W +I+
Sbjct: 475 IMCKYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMPVEPNAVVWRMLINA 527
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 147/321 (45%), Gaps = 11/321 (3%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFDS 105
+ ++L+ C + L KA HA + V G+ T L++MY G ++ R VFD
Sbjct: 248 VSLVSLISACTNXRDLHMGKAVHAFIKVSGMEMMIHFETALINMYSKCGSIELGRKVFDE 307
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ + + S+ MI Y + + + ++ R + D ++ AC D+ +G
Sbjct: 308 LADENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIKPDEVTMLGLISACRSSGDLHQG 367
Query: 166 MKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
++++ I + + L+DMYAKC + + VF + ++V+SWTS+I GY
Sbjct: 368 IQINSYIESSDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDVISWTSIIVGYAI 427
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK-IGIEINSH 282
N +E L+ F +M +E N +T +++AC + +GK L+ + K IE
Sbjct: 428 NGEGEEALLAFRKMGAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYDIMCKYYHIEPKIE 487
Query: 283 LVTALLDMYVKCGNIRDA-RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT---DK 338
++DM+ + G + +A + V D + V W +I G + L L + D
Sbjct: 488 HCGCMVDMHARAGMLEEAYKFVKDMPVEPNAVVWRMLINACRVHGDFNLGLNLVSGLIDV 547
Query: 339 KWADFFPNHVTIASVLSASAQ 359
K +HV +++ + + +
Sbjct: 548 KTEHGPEDHVISSNIFAEAGR 568
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 175/514 (34%), Positives = 289/514 (56%), Gaps = 28/514 (5%)
Query: 181 FVLTGLVDMYA--KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
FV + L+ +Y+ K D+G +R +FD ++++ W ++I YV+N + +G+VLF+ +
Sbjct: 46 FVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELV 105
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
++ N TL ++ CA+L + +GK +HG LKIG + + +L++MY KCG I
Sbjct: 106 HEYLPDN-FTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEID 164
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
AR VFD + D+V W ++I GY + G D AL+LF + D F V + + +
Sbjct: 165 CARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGL----S 220
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+ G + R + ++ + NA+++ Y K A +F D++ WN +
Sbjct: 221 KCGKVESARKLFD---QMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLM 277
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I+G + N P TLVSV+SA + L + G +H+Y K G
Sbjct: 278 IAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGF 337
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
+ +GT+L+ YAKCG +SA VF A+++K W+A+I G G+ G +LALF
Sbjct: 338 ELDGI-LGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFL 396
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+M ++PN +IF +L+AC+H G+V +G + F M ++K P+++HY C+VD+L RA
Sbjct: 397 EMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRA 456
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G LEEA +ENMPI P+ ++ + L G + + D+GE ++++E+ P+ Y+L+S
Sbjct: 457 GHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLS 516
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
N+YA+ G W +V+ VRE+M +RG K PGCS V+
Sbjct: 517 NMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVE 550
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 220/508 (43%), Gaps = 101/508 (19%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYG--SFGHVKYARSVFDSMPNPDFY 112
+GLC + ++ HA + + N +++L+++Y + YARS+FD +
Sbjct: 21 MGLC-APQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLI 79
Query: 113 SFQVMIRWYFLNDLYKD-IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
+ +I+ Y N D IV F++ + + L DNF V+K C L + EG ++H
Sbjct: 80 HWNTIIKCYVENQFSHDGIVLFHELVHEYLP--DNFTLPCVIKGCARLGVVQEGKQIHGL 137
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
+K+G G D FV LV+MY+KC +I +R+VFD +DK+VV W S+I GY +
Sbjct: 138 ALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIA 197
Query: 231 LVLFNRM--REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
L LF M R+ F W T L+
Sbjct: 198 LQLFEEMPERDAF------------------------SW-----------------TVLV 216
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD------ 342
D KCG + AR +FD++ +LVSW AMI GY +SG D AL+LF D
Sbjct: 217 DGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNL 276
Query: 343 -----------------FF--------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
FF P+H T+ SVLSA + L L GR +HS + G
Sbjct: 277 MIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNG 336
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------- 422
E D + +L++MYAKC I A +F +K V W +II GL
Sbjct: 337 FELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFL 396
Query: 423 ---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ P+A+ + V++AC G V G + + + L++ +
Sbjct: 397 EMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRA 456
Query: 480 GDAQSARMVFDAMR-EKNTVTWSAMIGG 506
G + A+ + M N V W +++GG
Sbjct: 457 GHLEEAKNTIENMPISPNKVIWMSLLGG 484
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 188/597 (31%), Positives = 317/597 (53%), Gaps = 33/597 (5%)
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK-------VLKACCELRDI 162
+F S+ MIR + N + E + + + ++E+ + F VL C R+I
Sbjct: 2 NFVSWNSMIRVFSDNGFSE---ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREI 58
Query: 163 DEGMKVHCEIVKVGGPDSFVLT-GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
G VH VK+ VL L+DMY+KC I +++ +F +KNVVSW +M+ G+
Sbjct: 59 GLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 118
Query: 222 VQNDCAQEGLVLFNRMREGF--VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
+ +M G V+ +++T+ + V C L K LH Y LK
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 178
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
N + A + Y KCG++ A+ VF + S + SW A+I G+ QS P +L K
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIA 398
+ P+ T+ S+LSA ++L +L +G+ VH IR LE D V +++ +Y C +
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 298
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDNVSPD-----------------AVTLVSVISACA 441
+ +F+ +K +++WN++I+G N PD ++++ V AC+
Sbjct: 299 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
L ++++G HAY+ K LL + ++ +L++ YAK G + VF+ ++EK+T +W+
Sbjct: 359 LLPSLRLGREAHAYALKH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWN 417
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
AMI GYG+ G ++ LF +M P+++ F +L+AC+H+G++ EG + M
Sbjct: 418 AMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSS 477
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFM-ENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
F P++KHY C++D+L RAG+L++AL + E M E DV ++ + L C ++ ++GE
Sbjct: 478 FGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGE 537
Query: 621 VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ K+ EL P+K YVL+SNLYA G+W V +VR+ M + L K GCS ++L+
Sbjct: 538 KVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 594
Score = 146 bits (369), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 179/359 (49%), Gaps = 25/359 (6%)
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG----NQITLGSLVTACAKLRALHQ 264
+N VSW SMI + N ++E +L M E +G + TL +++ CA+ R +
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +HG+ +K+ ++ L AL+DMY KCG I +A+ +F + ++VSW M+ G++
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 325 SGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDY 381
G + D + VTI + + L + +H ++ + +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------LDDNVS---- 427
V NA V YAKC ++ A+ +F K V +WN++I G LD ++
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240
Query: 428 ---PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
PD+ T+ S++SAC+ L ++++G +H + + L +++V ++L+ Y CG+ +
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLSVLSLYIHCGELCT 299
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ +FDAM +K+ V+W+ +I GY G +L +F M+ +Q + + ACS
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 9/282 (3%)
Query: 47 LP-SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARS 101
LP S +LL C SL K H +I + L D ++S+Y G + ++
Sbjct: 243 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQA 302
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+FD+M + S+ +I Y N + ++ M + V AC L
Sbjct: 303 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPS 362
Query: 162 IDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+ G + H +K + D+F+ L+DMYAK I S +VF+ +K+ SW +MI G
Sbjct: 363 LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMG 422
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEI 279
Y + A+E + LF M+ + +T ++TAC +H+G ++L G++
Sbjct: 423 YGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKP 482
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCS--IDLVSWTAMI 319
N ++DM + G + A V E S D+ W +++
Sbjct: 483 NLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 524
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 8/181 (4%)
Query: 47 LPSIPCLNLLGLCKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSV 102
L I + + G C SL+ HA + L +D L+ MY G + + V
Sbjct: 345 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 404
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
F+ + S+ MI Y ++ L K+ ++ ++ M++ D+ F VL AC I
Sbjct: 405 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 464
Query: 163 DEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETL--DKNVVSWTSMI 218
EG++ ++ G P+ ++DM + + + +V E + + +V W S++
Sbjct: 465 HEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLL 524
Query: 219 A 219
+
Sbjct: 525 S 525
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 186/573 (32%), Positives = 297/573 (51%), Gaps = 36/573 (6%)
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLV 187
D++ F R+R+ + +L+A + G+++H ++K+G G D+ + L+
Sbjct: 190 DLLGFLPMERRRM-------IADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLI 242
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
DMYAKC + + +VFD ++NVVSWT+++ G++ + A+E L LF MR N+
Sbjct: 243 DMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEF 302
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TL + + AC G +HG ++ G E + + +L+ MY K DAR VFD +
Sbjct: 303 TLSATLKACGG--GTRAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVI 360
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMG 366
S +L +W +MI GY +G +L +F + ++ D P+ T AS+L A + LG G
Sbjct: 361 PSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREG 420
Query: 367 RMVHSLGIRLGLE---DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-- 421
VH+ G+ + + AL+D+Y KCH + A +F+ ++ I W ++I G
Sbjct: 421 AQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHA 480
Query: 422 ---------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ--GLLSS 464
V D L SV++ A V+ G +H Y+ K GL
Sbjct: 481 QEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL--- 537
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+V V +L++ Y KCG A F M +N V+W+AMI G G G G ++ LF +M
Sbjct: 538 DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQ 597
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
E V+ +EV + +LSACSH+G+V E + F +C+D + P +HY CMVDLL RAG L
Sbjct: 598 AEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGEL 657
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
EA E + +MP+EP V ++ L C ++ +G + +L + D YV++SN+
Sbjct: 658 REAKELILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNIL 717
Query: 645 ASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
A G W +R M+++GL K GCS ++D
Sbjct: 718 AEAGEWRECQGIRGAMRRKGLRKQGGCSWTEVD 750
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 217/463 (46%), Gaps = 30/463 (6%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA L+ G +D N L+ MY G + A VFD MP + S+ ++ + +
Sbjct: 222 LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 281
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLT 184
++ + + MR + F S LKAC G+++H V+ G G D V
Sbjct: 282 ARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHD-VVAN 338
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVE 243
LV MY+K R G +R+VFD +N+ +W SMI+GY ++ L++F M R +
Sbjct: 339 SLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQ 398
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI--NSHLVTALLDMYVKCGNIRDAR 301
++ T SL+ AC+ L A +G +H + G+ N+ L ALLD+YVKC + A
Sbjct: 399 PDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAM 458
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD L + + WT +IVG+ Q G +A+ LF + + ++SV++ A
Sbjct: 459 QVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFA 518
Query: 362 NLNMGRMVHSLGIRL--GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+ G+ VH + GL D +V N+LVDMY KC + +A F ++V++W ++I
Sbjct: 519 LVEQGKQVHCYTAKTPAGL-DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMI 577
Query: 420 SGLD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+G+ + V D V ++++SAC+ G V + + +
Sbjct: 578 NGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRM 637
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMI 504
+++ + G+ + A+ + +M + TV W ++
Sbjct: 638 RPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLL 680
>gi|414585599|tpg|DAA36170.1| TPA: hypothetical protein ZEAMMB73_453858 [Zea mays]
Length = 829
Score = 314 bits (805), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 202/625 (32%), Positives = 342/625 (54%), Gaps = 31/625 (4%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G V R +FD+MP + S+ + WY ++ +E + M + + F
Sbjct: 189 YRGDGSVDVVRRLFDAMPKRNAVSWNTLFGWYVKTGRPQEALEMFVRMLEDGIKPTPVSF 248
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDET 206
V A + D ++ +VK G D FV++ + M+++ D+ S+ +VF+
Sbjct: 249 VNVFPAVAK-EDPSWSFVLYGLLVKHGMEYVNDLFVVSSAIVMFSELGDVQSAWRVFEYA 307
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNR-MREGFVEGNQITLGSLVTACAKLRALHQG 265
KN W +MI GYVQN E + L R M V + +T S +TA ++ + G
Sbjct: 308 AKKNTEVWNTMITGYVQNGKFAEAMGLVIRLMVSKEVPLDVVTFLSALTAASQSQDGRLG 367
Query: 266 KWLHGYILK-IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ LHGY++K + + L AL+ MY +CGN++ A +FD L D+VSW MI + Q
Sbjct: 368 QQLHGYLIKGMHTTLPVILGNALVVMYSRCGNVQTAFELFDRLHEKDIVSWNTMITAFVQ 427
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+ + + L L + + F + VT+ +VLSA++ G+L++G+ HS IR G+E +
Sbjct: 428 NDFDLEGLLLVYQMQKSGFAADLVTLTAVLSAASNTGDLHIGKQAHSYLIRHGIEGEGLE 487
Query: 385 NALVDMYAKCHVIADARYIFET--TSEKDVIAWNSIISG-----------------LDDN 425
+ L+DMYAK I A+ +F+ +++D + WN++I+G ++
Sbjct: 488 SYLIDMYAKSGRIEIAQRVFDDYGNAKRDEVTWNAMIAGYTQTGHPEQAILAFRAMIEAC 547
Query: 426 VSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P +VTL SV+ AC LG + G +H ++ ++ L +NV+VGTAL++ Y+KCG+ +
Sbjct: 548 LEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRR-CLDTNVFVGTALVDMYSKCGEIST 606
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A VF M EK+TV+++ MI G G G G +L+LF M + ++P+ V F +SAC++
Sbjct: 607 AEHVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSMQEKGLKPDGVTFLAAISACNY 666
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD-VSLF 603
+G+V EG + SM F V + +H C+VD+LA+AGR+EEA EF++ + E D VS++
Sbjct: 667 SGLVDEGLALYRSM-ETFGVVVTPQHRCCIVDMLAKAGRVEEAYEFVQELGEEGDFVSIW 725
Query: 604 GAFLHGCGLYSRFDLGEVMIKKM--LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
G L C + +L ++ +++ +E A Y VL+S+++A++G W + +R+ M+
Sbjct: 726 GTLLASCKAQDKQELVNLVTERLICIEKKYGHAGYSVLLSHIFAAEGNWSSADSLRKEMR 785
Query: 662 QRGLSKSPGCSLVDLDIANDFSFSR 686
RGLSK G S + + A S+ +
Sbjct: 786 LRGLSKMAGSSWIKVQHAALQSYPK 810
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 158/594 (26%), Positives = 267/594 (44%), Gaps = 86/594 (14%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVL-TGLVDMYAKC---RDIGS 198
D++ +S L AC R + G VH +++ PD+ VL L+++YA C R GS
Sbjct: 135 DHYTYSCALTACARTRRLRLGKSVHAHLLRRARSLPDTAVLRNSLLNVYASCVRYRGDGS 194
Query: 199 ---SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
R++FD +N VSW ++ YV+ QE L +F RM E ++ ++ ++ A
Sbjct: 195 VDVVRRLFDAMPKRNAVSWNTLFGWYVKTGRPQEALEMFVRMLEDGIKPTPVSFVNVFPA 254
Query: 256 CAKLRALHQGKW---LHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSI 310
AK W L+G ++K G+E + L V++ + M+ + G+++ A VF+
Sbjct: 255 VAK----EDPSWSFVLYGLLVKHGMEYVNDLFVVSSAIVMFSELGDVQSAWRVFEYAAKK 310
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMV 369
+ W MI GY Q+G +A+ L + P + VT S L+A++Q + +G+ +
Sbjct: 311 NTEVWNTMITGYVQNGKFAEAMGLVIRLMVSKEVPLDVVTFLSALTAASQSQDGRLGQQL 370
Query: 370 HSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-- 425
H I+ VI NALV MY++C + A +F+ EKD+++WN++I+ N
Sbjct: 371 HGYLIKGMHTTLPVILGNALVVMYSRCGNVQTAFELFDRLHEKDIVSWNTMITAFVQNDF 430
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
+ D VTL +V+SA ++ G + +G H+Y + G+ + +
Sbjct: 431 DLEGLLLVYQMQKSGFAADLVTLTAVLSAASNTGDLHIGKQAHSYLIRHGIEGEGLE--S 488
Query: 471 ALLNFYAKCGDAQSARMVFD--AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
L++ YAK G + A+ VFD +++ VTW+AMI GY G ++ F M+ +
Sbjct: 489 YLIDMYAKSGRIEIAQRVFDDYGNAKRDEVTWNAMIAGYTQTGHPEQAILAFRAMIEACL 548
Query: 529 QPNEVIFTTILSACSHTG---MVGEGWKCF-------------------YSMCRDFKFV- 565
+P V ++L AC G G+ CF YS C +
Sbjct: 549 EPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAE 608
Query: 566 --------PSMKHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYS 614
S Y M+ L + G + AL M+ ++PD F A + C
Sbjct: 609 HVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSMQEKGLKPDGVTFLAAISACNYSG 668
Query: 615 RFDLGEVMIKKM----LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
D G + + M + + P C V ++ A G RV + E +++ G
Sbjct: 669 LVDEGLALYRSMETFGVVVTPQHRCCIV---DMLAKAG---RVEEAYEFVQELG 716
Score = 148 bits (374), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 175/361 (48%), Gaps = 16/361 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV MY G+V+ A +FD + D S+ MI + ND + + M+K D
Sbjct: 390 LVVMYSRCGNVQTAFELFDRLHEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFAAD 449
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
+ VL A D+ G + H +++ G + + L+DMYAK I +++VFD+
Sbjct: 450 LVTLTAVLSAASNTGDLHIGKQAHSYLIRHGIEGEGLESYLIDMYAKSGRIEIAQRVFDD 509
Query: 206 --TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL-RAL 262
++ V+W +MIAGY Q ++ ++ F M E +E +TL S++ AC L L
Sbjct: 510 YGNAKRDEVTWNAMIAGYTQTGHPEQAILAFRAMIEACLEPTSVTLASVLPACDPLGGGL 569
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H + L+ ++ N + TAL+DMY KCG I A VF ++ VS+T MI G
Sbjct: 570 CAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFADMTEKSTVSYTTMISGL 629
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
Q G+ AL LF + P+ VT + +SA G ++ G L + +E +
Sbjct: 630 GQHGFGKSALSLFYSMQEKGLKPDGVTFLAAISACNYSGLVDEG-----LALYRSMETFG 684
Query: 383 VINA------LVDMYAKCHVIADA-RYIFETTSEKDVIA-WNSIISGLDDNVSPDAVTLV 434
V+ +VDM AK + +A ++ E E D ++ W ++++ + V LV
Sbjct: 685 VVVTPQHRCCIVDMLAKAGRVEEAYEFVQELGEEGDFVSIWGTLLASCKAQDKQELVNLV 744
Query: 435 S 435
+
Sbjct: 745 T 745
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 7/260 (2%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP-- 109
+L +TG L K H+ LI G+ + + L+ MY G ++ A+ VFD N
Sbjct: 456 VLSAASNTGDLHIGKQAHSYLIRHGIEGEGLESYLIDMYAKSGRIEIAQRVFDDYGNAKR 515
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL-RDIDEGMKV 168
D ++ MI Y + + ++ M + E + + VL AC L + G ++
Sbjct: 516 DEVTWNAMIAGYTQTGHPEQAILAFRAMIEACLEPTSVTLASVLPACDPLGGGLCAGKQI 575
Query: 169 HC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
HC + + + FV T LVDMY+KC +I ++ VF + +K+ VS+T+MI+G Q+
Sbjct: 576 HCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFADMTEKSTVSYTTMISGLGQHGFG 635
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ L LF M+E ++ + +T + ++AC + +G L+ + G+ + +
Sbjct: 636 KSALSLFYSMQEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVVVTPQHRCCI 695
Query: 288 LDMYVKCGNIRDARSVFDEL 307
+DM K G + +A EL
Sbjct: 696 VDMLAKAGRVEEAYEFVQEL 715
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 11/149 (7%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM 137
TN T LV MY G + A VF M S+ MI + K + + M
Sbjct: 586 TNVFVGTALVDMYSKCGEISTAEHVFADMTEKSTVSYTTMISGLGQHGFGKSALSLFYSM 645
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-----LVDMYAK 192
+++ + D F + AC +DEG+ ++ + G V+T +VDM AK
Sbjct: 646 QEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFG----VVVTPQHRCCIVDMLAK 701
Query: 193 CRDIGSSRQVFDETLDKN--VVSWTSMIA 219
+ + + E ++ V W +++A
Sbjct: 702 AGRVEEAYEFVQELGEEGDFVSIWGTLLA 730
>gi|356565618|ref|XP_003551036.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 619
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/644 (30%), Positives = 324/644 (50%), Gaps = 61/644 (9%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
+LL CK+ K H +++ G ++ TKL+ +Y ++ A ++ + +P+ +
Sbjct: 10 SLLQACKTLNQAKQLHHRILLTGSHHNHFFVTKLIQIYADSNDLRSAVTLLHQISHPNVF 69
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+F ++ ++ + L ++ Y +R+ D +VF KVLKAC +L G VH ++
Sbjct: 70 AFTSILSFHSRHGLGHQCIQTYAELRRNGVVPDGYVFPKVLKACAQLSRFGSGRGVHKDV 129
Query: 173 VKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
V G + V ++DMY+KC D+GS+RQVFDE +++V SW SM++GYV N + +
Sbjct: 130 VVFGEESNLQVRNSVLDMYSKCGDVGSARQVFDEMSERDVFSWNSMMSGYVWNGLPHKAV 189
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
+ M++ C G E + ++D Y
Sbjct: 190 EVLGVMKK--------------DGC-------------------GCEPDVVTWNTVMDAY 216
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF-PNHVTI 350
+ G +A VF E+ +++SWT +I GY G D +L +F P+ +
Sbjct: 217 CRMGQCCEASRVFGEIEDPNVISWTILISGYAGVGRHDVSLGIFRQMVNVGMVSPDVDAL 276
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDY---TVINALVDMYAKCHVIADARYIFETT 407
+ VL + LG L G+ +H G+++ D + AL+ +YA + A +F
Sbjct: 277 SGVLVSCRHLGALASGKEIHGYGLKIMCGDVFYRSAGAALLMLYAGWGRLDCADNVFWRM 336
Query: 408 SEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQVGS 450
+ DV+ WN++I GL D V D T+ S++ C ++ G
Sbjct: 337 DKSDVVTWNAMIFGLVDVGLVDLALDCFREMQGRGVGIDGRTISSILPVCD----LRCGK 392
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+HAY K S + V AL++ Y+ G A VF M ++ V+W+ +IGG+G
Sbjct: 393 EIHAYVRKCNF-SGVIPVYNALIHMYSIRGCIAYAYSVFSTMVARDLVSWNTIIGGFGTH 451
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G G +L L +M V+P+ V F+ LSACSH+G+V EG + FY M +DF P+ +H
Sbjct: 452 GLGQTALELLQEMSGSGVRPDLVTFSCALSACSHSGLVNEGIELFYRMTKDFSMTPAREH 511
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
+ C+VD+LARAGRLE+A F+ MP EP+ ++GA L C + +G++ +K++ L
Sbjct: 512 FSCVVDMLARAGRLEDAFHFINQMPQEPNNHVWGALLAACQEHQNISVGKLAAEKLISLE 571
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
P +A +YV +SN+Y+ GRW +VR++M GL K G SLV
Sbjct: 572 PHEAGHYVTLSNIYSRAGRWDDAARVRKMMDGHGLLKPSGHSLV 615
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 188/589 (31%), Positives = 310/589 (52%), Gaps = 49/589 (8%)
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
MP + ++ MI Y N L ++ +E + MR+ E S L A L + +G
Sbjct: 160 MPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDG 219
Query: 166 MKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+ H V G + L + L++ Y+K I + VF L+K+VV+W +I+GYVQ
Sbjct: 220 KQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQI 279
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ L + + MR + + +TL +L++A A +R L GK H Y ++ +E + +V
Sbjct: 280 GEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVV 339
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
++++DMY KC I AR VF+ + DL+ W M+ + + G+ +AL LF +
Sbjct: 340 SSIVDMYAKCEKIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVP 399
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIF 404
PN ++ S++ LG LN G+ +N DM+ + +
Sbjct: 400 PNVISWNSLI-----LGFLNSGQ----------------VNEAKDMFLQMQSLG------ 432
Query: 405 ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQ 447
+ +++ W ++ISGL + V P+ V+++ V+ AC +L ++Q
Sbjct: 433 ---VQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQ 489
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G +LH Y + L S + + T+L++ YAKCGD A+ VFD + +K ++AMI G+
Sbjct: 490 IGRALHGYLIRHSLYLS-IPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNAMISGF 548
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
+ G +LAL+ + E ++P+ + FT L ACSH MV EG + F M + PS
Sbjct: 549 ALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINPS 608
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
++HY CMV LL+R G L+EA + MP +PDV + G+ L C +++ +L E + ++L
Sbjct: 609 IEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSNQLL 668
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+L PD + YV +SN YA+ GRW V +VR+LMK+RGL K PGCS + +
Sbjct: 669 KLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCSWIQV 717
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 166/559 (29%), Positives = 268/559 (47%), Gaps = 44/559 (7%)
Query: 66 KAFHALLIVDGLT---NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+ HA ++ G N+ TKLV Y + + + S+F + + +S+ +I
Sbjct: 30 RQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVRLKNVFSWAAVIGLNC 89
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV 182
Y++ + +K M++ DNFV VLKAC L I G VH V
Sbjct: 90 RKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKVVH----------GLV 139
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
G V K G ++ +N V+W SMI GYVQN +E + +F MRE V
Sbjct: 140 SCGYV---WKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGV 196
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
E Q+TL S ++A A L AL GK H + GIE+ ++L ++L++ Y K G I DA S
Sbjct: 197 EPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAES 256
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VF + D+V+W +I GY Q G DKAL + + + + VT+A+++SA A + N
Sbjct: 257 VFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFADMRN 316
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
L +G+ H IR LE D V++++VDMYAKC I AR +F ++ KD+I WN++
Sbjct: 317 LKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLILWNTM--- 373
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVGSSLHA-YSTKQGLLSSNVYVGTALLNFYAKCG 480
++A A LG G +L+ Y + + NV +L+ + G
Sbjct: 374 ---------------LAAFAELG--HSGEALNLFYQMQLESVPPNVISWNSLILGFLNSG 416
Query: 481 DAQSARMVFDAMR----EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
A+ +F M+ + N VTW+ +I G G G ++ F M V+PN V
Sbjct: 417 QVNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSII 476
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L AC + + G + R ++ S+ +VD+ A+ G ++A + +P
Sbjct: 477 GVLLACINLASLQIGRALHGYLIRHSLYL-SIPIATSLVDMYAKCGDRDQAKRVFDMIP- 534
Query: 597 EPDVSLFGAFLHGCGLYSR 615
+ ++ ++ A + G L+ +
Sbjct: 535 DKELPIYNAMISGFALHGQ 553
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 245/491 (49%), Gaps = 53/491 (10%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFD 204
V+ ++L+ C R + G ++H +IVK G + ++ T LV YAKC + +S +F
Sbjct: 12 VYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFR 71
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
KNV SW ++I + QE L+ F M+E + + L +++ AC L +
Sbjct: 72 RVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRI 131
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNI------RDARSVFDELCSIDLVSWTAM 318
GK +HG V CG + + + + V+W +M
Sbjct: 132 GKVVHG--------------------LVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSM 171
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
IVGY Q+G ++A+++F + + P VT++S LSASA LG L G+ H++ + G+
Sbjct: 172 IVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGI 231
Query: 379 EDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LD-------- 423
E T + ++L++ Y+K +I DA +F EKDV+ WN +ISG +D
Sbjct: 232 EMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHL 291
Query: 424 ---DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+N+ D+VTL +++SA A + +++G H Y + L S+V V +++++ YAKC
Sbjct: 292 MRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNN-LESDVVVVSSIVDMYAKCE 350
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
AR VF++ K+ + W+ M+ + G G +L LF M E V PN + + +++
Sbjct: 351 KIGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLIL 410
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL---EFMENMPIE 597
++G V E F M + P++ + ++ LAR+G EA+ + M+ ++
Sbjct: 411 GFLNSGQVNEAKDMFLQM-QSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVK 469
Query: 598 PD-VSLFGAFL 607
P+ VS+ G L
Sbjct: 470 PNVVSIIGVLL 480
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ C+NL L G +A H LI L + T LV MY G A+ VFD +P+
Sbjct: 480 LACINLASL--QIG--RALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPD 535
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ + MI + L+ + + Y+C+++ + DN F+ L AC + EG+++
Sbjct: 536 KELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLEL 595
Query: 169 HCEIV 173
++V
Sbjct: 596 FVDMV 600
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 176/489 (35%), Positives = 265/489 (54%), Gaps = 21/489 (4%)
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
L SW + + + QE L L+ +M N T +CA L G
Sbjct: 17 LQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGS 76
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE-LCSIDL-VSWTAMIVGYTQ 324
LHG+++K G E + T+L+ MY KC I AR VFDE S +L V + A+I GY+
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSL 136
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+ A+ LF + N VT+ ++ A +L G +H+ +R GL+ D +V
Sbjct: 137 NSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSV 196
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
N L+ MY +C + AR +F+ EK +I WN++ISG N +
Sbjct: 197 GNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGI 256
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD VTLV V+S+CA LGA G + G N ++ AL+N YA+CG+ AR
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGF-GFNPFLKNALINMYARCGNLVKAR 315
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+FD M EKN ++W+A+I GYGM G G ++ LF +M++ + P+ F ++LSACSH G
Sbjct: 316 AIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAG 375
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+ +G F +M RD+ P +HY C+VDLL RAGRLEEA + + +M +EPD +++GA
Sbjct: 376 LTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGAL 435
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ +L E+ +K++E P YYVL+SN+++ G + +VR +M++R L
Sbjct: 436 LGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLK 495
Query: 667 KSPGCSLVD 675
K PGCS V+
Sbjct: 496 KEPGCSYVE 504
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/453 (28%), Positives = 217/453 (47%), Gaps = 30/453 (6%)
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
S+ +R +++ + Y M + F F K+C L G ++H +
Sbjct: 23 SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN--VVSWTSMIAGYVQNDCAQE 229
+K G P+ FV T L+ MY KC I S+R+VFDE V + ++IAGY N +
Sbjct: 83 IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
++LF +MR+ V N +T+ L+ CA L G LH ++ G++ + + LL
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MYV+CG++ AR +FD + L++W AMI GY Q+G L L+ ++ P+ VT
Sbjct: 203 MYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVT 262
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT----VINALVDMYAKCHVIADARYIFE 405
+ VLS+ A LG GR V R+ L + + NAL++MYA+C + AR IF+
Sbjct: 263 LVGVLSSCAHLGAHAAGREVEQ---RIELSGFGFNPFLKNALINMYARCGNLVKARAIFD 319
Query: 406 TTSEKDVIAWNSIISG-------------LDDNVS----PDAVTLVSVISACASLGAVQV 448
+EK+VI+W +II+G D+ +S PD VSV+SAC+ G +
Sbjct: 320 GMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEK 379
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGY 507
G + L + +++ + G + AR + +M E + W A++G
Sbjct: 380 GLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGAC 439
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + + F ++ E +P + + +LS
Sbjct: 440 KIHRNVELAELAFEKVI--EFEPTNIGYYVLLS 470
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 192/421 (45%), Gaps = 30/421 (7%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYS--FQVMIRWYFLNDLYKDIVEFYKCMRKR 140
T L+SMY + AR VFD + + + +I Y LN + D V ++ MRK
Sbjct: 94 QTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKE 153
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
+ ++ C + G +H V+ G D V L+ MY +C + +
Sbjct: 154 GVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLTMYVRCGSVDFA 213
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R++FD +K +++W +MI+GY QN A L L+ +M + + +TL ++++CA L
Sbjct: 214 RKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHL 273
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
A G+ + I G N L AL++MY +CGN+ AR++FD + +++SWTA+I
Sbjct: 274 GAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAII 333
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGI 374
GY G + A++LF + +D P+ SVLSA + G G M G+
Sbjct: 334 AGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGL 393
Query: 375 RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV 434
+ G E Y+ + VD+ + + +AR + + S V PD
Sbjct: 394 QPGPEHYSCV---VDLLGRAGRLEEARKLIGSMS-----------------VEPDGAVWG 433
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
+++ AC V++ A+ +N+ L N +++ G+ + V MRE
Sbjct: 434 ALLGACKIHRNVELAEL--AFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRE 491
Query: 495 K 495
+
Sbjct: 492 R 492
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/572 (31%), Positives = 316/572 (55%), Gaps = 26/572 (4%)
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-T 184
L I++FYK + + ++ V+KAC G++++ ++K G FV+
Sbjct: 6 LNHQILKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICN 65
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
+ YAK S+ +VFD K+ +SW +I GY QN +G ++F M E +
Sbjct: 66 SFISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVP 125
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYIL---KIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ S+V+ C +L + G+ +H +L +I EI ++T+L+D Y K G+ A
Sbjct: 126 KPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEI--FVLTSLVDWYFKSGDSLMAL 183
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD++ ++VSWTA++ G + + + AL F + PN VT+ ++L A A+LG
Sbjct: 184 RVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELG 243
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHV-IADARYIFETTSEKDVIAWNSII 419
G+ +H R G + D+ +++L+ +Y + + A+ FE ++ KDV+ W+SII
Sbjct: 244 CAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSII 303
Query: 420 SGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
D P++VTL++VI+AC +L +++ G H Y K GL
Sbjct: 304 GSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGL- 362
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ + Y+G AL+N Y+KCG ++ +F M K++V+WS +I YG+ G G +L LF +
Sbjct: 363 NFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHE 422
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M + V+P+ + F +LSAC+H+G+V EG + F ++ +D K +++HY C+VDLL ++G
Sbjct: 423 MQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSG 482
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
++++A + + MP++P +++ + + C ++ R ++ E + +++++ P A + L+S
Sbjct: 483 KVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANHTLLSM 542
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+YA G W V VR LM+ +GLSK G S V
Sbjct: 543 IYAESGNWFAVEDVRRLMRVQGLSKCYGFSQV 574
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 145/501 (28%), Positives = 245/501 (48%), Gaps = 35/501 (6%)
Query: 68 FHALLIVDGLTND--KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+++++ GL +D CN+ +S Y + A VFD+MP D S+ +I YF N
Sbjct: 48 LYSIVLKSGLDSDFVICNS-FISFYAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNG 106
Query: 126 LYKD----IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPD 179
+ E Y+C E + + V+ C L D+ G +H ++ G +
Sbjct: 107 YFTQGFIMFKEMYECGIVPKPE----LVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKE 162
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
FVLT LVD Y K D + +VFD+ KNVVSWT++++G N L F M+
Sbjct: 163 IFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQI 222
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC-GNIR 298
V N++TL +++ A A+L GK +HGY + G +++ H +++L+ +Y + ++
Sbjct: 223 NGVRPNRVTLIAILPAFAELGCAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQ 282
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
A+ F+ D+V W+++I Y +S +ALKLF + PN VT+ +V++A
Sbjct: 283 LAKLTFERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACT 342
Query: 359 QLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
L +L G H ++ GL D + NAL++MY+KC + + IF+ KD ++W++
Sbjct: 343 TLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWST 402
Query: 418 IIS--GLDDN---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+I+ GL + V PDA+T ++V+SAC G V+ G + K G
Sbjct: 403 LITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDG 462
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLAL 519
+S V L++ K G A + AM K +T WS+++ + G + L
Sbjct: 463 KVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERL 522
Query: 520 FSDMLNEEVQPNEVIFTTILS 540
+++ E P+ T+LS
Sbjct: 523 AQELIKSE--PSNAANHTLLS 541
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 9/180 (5%)
Query: 49 SIPCLNLLGLCKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFD 104
S+ L ++ C + SLK H ++ GL D L++MY G V + +F
Sbjct: 331 SVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFK 390
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
M D S+ +I Y L+ K+ + + M+ + E D F VL AC + E
Sbjct: 391 EMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKE 450
Query: 165 GMKVHCEIVKVGGPDSFVL---TGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIAG 220
G ++ + VK G S + LVD+ K + + + + + W+S+++
Sbjct: 451 GQQIF-DNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSA 509
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 191/617 (30%), Positives = 327/617 (52%), Gaps = 30/617 (4%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
N + + MY GHV+ A +F + D ++ +I Y N+ + KC+
Sbjct: 143 NSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNN---ESGRGLKCLF 199
Query: 139 K--RLKEHDNF-VFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCR 194
+ R+ N+ +AC +L + EG +H +K G V + ++ MY++C
Sbjct: 200 EMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCG 259
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
+ + F + K+++SWTS+IA + + E L LF M+ + ++I + ++
Sbjct: 260 SPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLM 319
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
+ +GK H ILK ++ ALL MY K G++ A +F
Sbjct: 320 GFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSFHKSS-ED 378
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W+ MI+GY+ G +K + + P+ ++ SV+S+ +Q+G +N+GR +H I
Sbjct: 379 WSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAI 438
Query: 375 RLGL-EDYTVINALVDMYAKC-HVIADARYIFETTSEKDVIAWNSIISG----------- 421
+ + E+ +V N+L+DMY K HV A R IF T ++DVI+WN++IS
Sbjct: 439 KNSIIENVSVANSLMDMYGKSGHVTATWR-IFHRTLQRDVISWNTLISSYKQSGILAEAI 497
Query: 422 ------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ + V P+ VT + V+SACA L ++ G +H Y + G SN+ + TAL++
Sbjct: 498 ILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGF-ESNITIRTALIDM 556
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
YAKCG+ +++R +F++ E++ + W+ MI YGM G ++ +F M ++PN F
Sbjct: 557 YAKCGELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTF 616
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
++LSAC+HTG V EG F M + + PS+KHY ++DLL R+G LE A + +MP
Sbjct: 617 LSLLSACNHTGHVLEGRHLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMP 675
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
I PD +++G+ L C +++ F++G + + +E P YY+++S+LY+ GRW V +
Sbjct: 676 ITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEK 735
Query: 656 VRELMKQRGLSKSPGCS 672
VR++MK+RG+ K G S
Sbjct: 736 VRDMMKKRGVEKRAGWS 752
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 178/636 (27%), Positives = 312/636 (49%), Gaps = 34/636 (5%)
Query: 68 FHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
FH+L+I G +N+ TKL++ Y ++ +F + + D + + +I+ +F N
Sbjct: 29 FHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGD 88
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLT 184
Y+ +FY MR + F V+ C EL + GM +H K+G +S + +
Sbjct: 89 YQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGS 148
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL-VLFNRMREGFVE 243
+ MY+KC + S+ +F E K+VV+WT++I GYVQN+ + GL LF R G
Sbjct: 149 SFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTP 208
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N T+GS AC L AL +GK LHG LK G + + +L MY +CG+ +A
Sbjct: 209 -NYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRC 267
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F +L DL+SWT++I +++ G + L LF + + ++ P+ + I+ +L +
Sbjct: 268 FCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRI 327
Query: 364 NMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG 421
G+ H+ ++ L T NAL+ MY K + A IF + K W+++I G
Sbjct: 328 FEGKAFHARILKQCCALSGITH-NALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILG 385
Query: 422 LDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ PD +LVSVIS+C+ +GA+ +G S+H Y+ K ++
Sbjct: 386 YSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSII-E 444
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
NV V +L++ Y K G + +F +++ ++W+ +I Y G ++ LF M+
Sbjct: 445 NVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMV 504
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
E+V PN+V +LSAC+H + EG K + ++ F ++ ++D+ A+ G L
Sbjct: 505 KEKVYPNKVTCIIVLSACAHLASLDEGEK-IHQYIKENGFESNITIRTALIDMYAKCGEL 563
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSN 642
E + + N E DV L+ + G++ + + + M E + P+ + L+S
Sbjct: 564 ETSRKLF-NSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSA 622
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPG--CSLVDL 676
+ G + + + M++ G+ S S++DL
Sbjct: 623 CNHT-GHVLEGRHLFDRMQKYGIEPSLKHYASIIDL 657
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 215/451 (47%), Gaps = 40/451 (8%)
Query: 66 KAFHALLI-----VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW 120
KAFHA ++ + G+T++ L+SMY FGH+ A +F S + MI
Sbjct: 331 KAFHARILKQCCALSGITHNA----LLSMYCKFGHLGTANKIFHSFHKSS-EDWSTMILG 385
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
Y + + F + M +E D V+ +C ++ I+ G +HC +K ++
Sbjct: 386 YSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIEN 445
Query: 181 F-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
V L+DMY K + ++ ++F TL ++V+SW ++I+ Y Q+ E ++LF++M +
Sbjct: 446 VSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVK 505
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
V N++T +++ACA L +L +G+ +H YI + G E N + TAL+DMY KCG +
Sbjct: 506 EKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELET 565
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
+R +F+ D++ W MI Y G+ + A+++F + ++ PN T S+LSA
Sbjct: 566 SRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNH 625
Query: 360 LGNLNMGRMV----HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
G++ GR + GI L+ Y +++D+ + + A +
Sbjct: 626 TGHVLEGRHLFDRMQKYGIEPSLKHYA---SIIDLLGRSGSLEAAEALV----------- 671
Query: 416 NSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
L ++PD S++SAC +VG L Y+ + + Y+ L +
Sbjct: 672 ------LSMPITPDGTVWGSLLSACKIHNEFEVGVRLARYAIESDPKNDGYYI--ILSDL 723
Query: 476 YAKCGDAQSARMVFDAMREKNT---VTWSAM 503
Y+ G V D M+++ WSA+
Sbjct: 724 YSCLGRWDEVEKVRDMMKKRGVEKRAGWSAL 754
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/582 (30%), Positives = 309/582 (53%), Gaps = 56/582 (9%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ ++++ C + G ++H +V PD+F+ + L+ Y+K I + VF +
Sbjct: 6 YGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIP 65
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM---REGFVEGNQITLGSLVTACAKLRALHQ 264
KN+ SW +++ Y ++ + L LF+ + V+ ++ T+ + A A L +
Sbjct: 66 RKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFSNSG 125
Query: 265 -GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
K +H +IL+ G+E + +V AL+ Y +C + AR +FD + D+VSW AM+ GY+
Sbjct: 126 LAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYS 185
Query: 324 QSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
Q G +K +LF + + PN +T SVL A AQ +L G VH ++ D
Sbjct: 186 QGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDV 245
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIA--------------------------- 414
++ NA++ +YAKC + AR +FE EKD I
Sbjct: 246 SLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERP 305
Query: 415 ----WNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLH 453
WN++ISGL N P+ VTL S++ + ++ G +H
Sbjct: 306 RLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIH 365
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
Y+ + N+YV TA+++ YAKCG A++VFD ++ ++ + W+++I Y + GD
Sbjct: 366 GYAIRN-TYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDA 424
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+L+LF +ML +QP++V FT++L+AC+H+G + E WK F + ++ P ++HY C
Sbjct: 425 NVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYAC 484
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
MV +L+RAG+L +A+EF+ MP+EP ++GA L+G + +LG+ + ++ E+ P+
Sbjct: 485 MVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPEN 544
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
YV+++NLY+ GRW + +R+LMK+ L K PG S ++
Sbjct: 545 TGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIE 586
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 150/580 (25%), Positives = 267/580 (46%), Gaps = 96/580 (16%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA L++ + D +KL+S Y G ++ A +VF +P + +S+ ++ Y L+
Sbjct: 23 KQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLH 82
Query: 125 DLYKDIVEFYKCMRKRLK---EHDNFVFSKVLKACCELRDIDEGM--KVHCEIVKVGGP- 178
+++ D+++ + + + D F + LKA L + G+ +VH I++ G
Sbjct: 83 NMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLFS-NSGLAKEVHSFILRRGLEY 141
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D FV+ L+ Y++C ++ +R +FD ++++VSW +M+AGY Q ++ LF M
Sbjct: 142 DIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGYSQGGSYEKCKELFRVML 201
Query: 239 EGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
V+ N +T S++ ACA+ L G +H ++ + I+++ L A++ +Y KCG++
Sbjct: 202 SSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGSL 261
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK------W----------- 340
AR +F+E+ D +++ +MI GY G+ ++A+ LF +++ W
Sbjct: 262 DYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNN 321
Query: 341 -----ADFF---------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
D F PN VT+AS+L + L G+ +H IR + + V
Sbjct: 322 RQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVAT 381
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSP 428
A++D YAKC + A+ +F+ + +IAW SIIS L + + P
Sbjct: 382 AIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQP 441
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D VT SV++ACA G + A+ LL Y L+ YA
Sbjct: 442 DQVTFTSVLAACAHSGELD-----EAWKIFNVLLPE--YGIQPLVEHYA----------- 483
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
M+G G ++ S M ++P ++ +L+ S G V
Sbjct: 484 -------------CMVGVLSRAGKLSDAVEFISKM---PLEPTAKVWGALLNGASVAGDV 527
Query: 549 GEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEEA 587
G Y R F+ P + +YV M +L +++GR ++A
Sbjct: 528 ELG---KYVFDRLFEIEPENTGNYVIMANLYSQSGRWKDA 564
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 159/320 (49%), Gaps = 28/320 (8%)
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N G L+ C GK LH ++ + ++ L + L+ Y K G+IRDA +VF
Sbjct: 2 NYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVF 61
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFT---DKKWADFFPNHVTIASVLSASAQL- 360
++ ++ SW A+++ YT LKLF+ + D P+ T+ L A A L
Sbjct: 62 GKIPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCALKALASLF 121
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
N + + VHS +R GLE D V+NAL+ Y++C + AR +F+ E+D+++WN+++
Sbjct: 122 SNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDIVSWNAML 181
Query: 420 SGLDD------------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+G V P+A+T VSV+ ACA + G +H + +
Sbjct: 182 AGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRF-VNESQ 240
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
+ +V + A++ YAKCG AR +F+ M EK+ +T+ +MI GY + G ++
Sbjct: 241 IKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAM---- 296
Query: 522 DMLNEEVQPNEVIFTTILSA 541
D+ E+ +P + ++S
Sbjct: 297 DLFREQERPRLPTWNAVISG 316
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 263/447 (58%), Gaps = 21/447 (4%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
S++T C A+ +G+ +H +++K E +L T L+ +Y KC + DAR V DE+
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
++VSWTAMI GY+Q GY +AL LF + + PN T A+VL++ +GR +H
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601
Query: 371 SLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----LDD 424
SL I+ E + + ++L+DMYAK I +AR +F+ E+DV++ +IISG LD+
Sbjct: 602 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 661
Query: 425 N------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
+ + VT SV++A + L A+ G +H++ + L V + +L
Sbjct: 662 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR-AKLPFYVVLQNSL 720
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-EVQPN 531
++ Y+KCG +R +FD+M E+ ++W+AM+ GY G G ++ LF M E +V+P+
Sbjct: 721 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 780
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFK-FVPSMKHYVCMVDLLARAGRLEEALEF 590
V F +LS CSH GM G + FY M F P ++HY C+VDL RAGR+EEA EF
Sbjct: 781 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 840
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
++ MP EP +++G+ L C ++ +GE + +++LE+ + A YV++SNLYAS GRW
Sbjct: 841 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 900
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDLD 677
V VRELMK++ + K PG S ++LD
Sbjct: 901 DDVRTVRELMKEKAVIKEPGRSWIELD 927
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 199/381 (52%), Gaps = 24/381 (6%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ VL C I EG +VH ++K P ++ T L+ +Y KCR +G +R+V DE
Sbjct: 480 YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 539
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
++NVVSWT+MI+GY Q A E L LF M N+ T +++T+C G+
Sbjct: 540 ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQ 599
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H ++K E + + ++LLDMY K G I +AR VFD L D+VS TA+I GY Q G
Sbjct: 600 IHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGL 659
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NA 386
++AL LF + N+VT ASVL+A + L L+ GR VHS +R L Y V+ N+
Sbjct: 660 DEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 719
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------------DDNVSP 428
L+DMY+KC + +R IF++ E+ VI+WN+++ G ++ V P
Sbjct: 720 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 779
Query: 429 DAVTLVSVISACASLGAVQVGSSL--HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D+VT ++V+S C+ G G + + K G + G +++ + + G + A
Sbjct: 780 DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYG-CVVDLFGRAGRVEEAF 838
Query: 487 MVFDAMR-EKNTVTWSAMIGG 506
M E W +++G
Sbjct: 839 EFIKKMPFEPTAAIWGSLLGA 859
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 199/428 (46%), Gaps = 40/428 (9%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T+L+ +Y + AR V D MP + S+ MI Y + + + M
Sbjct: 516 TRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTA 575
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQV 202
+ F F+ VL +C G ++H ++K FV + L+DMYAK I +R+V
Sbjct: 576 PNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRV 635
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD +++VVS T++I+GY Q +E L LF R++ + N +T S++TA + L AL
Sbjct: 636 FDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAAL 695
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +H ++L+ + L +L+DMY KCG++ +R +FD + ++SW AM+VGY
Sbjct: 696 DHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGY 755
Query: 323 TQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSL-GIR 375
++ G +A++LF K+ P+ VT +VLS + G + G MV+ G
Sbjct: 756 SKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFE 815
Query: 376 LGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV 434
+E Y + VD++ + + +A +I + E W S+
Sbjct: 816 PEIEHYGCV---VDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSL---------------- 856
Query: 435 SVISACASLGAVQVGSSLH-AYSTKQGLL---SSNVYVGTALLNFYAKCGDAQSARMVFD 490
LGA +V ++H + LL S N L N YA G R V +
Sbjct: 857 --------LGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRE 908
Query: 491 AMREKNTV 498
M+EK +
Sbjct: 909 LMKEKAVI 916
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/675 (29%), Positives = 310/675 (45%), Gaps = 124/675 (18%)
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
+S Y + AR +FD MP S+ MI Y + + + + M + +
Sbjct: 39 ISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSE 98
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFD 204
FS VL C LR + +G +HC ++K G +SF L G L+ YA C +IG +R+VFD
Sbjct: 99 STFSSVLSVCARLRCLRDGKLIHCLVLK-SGSESFELVGSALLYFYASCFEIGEARRVFD 157
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--------------------------- 237
+ +N V W+ M+ GYV + + L +F +M
Sbjct: 158 VLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALE 217
Query: 238 ------REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
R G N+ T +V AC +L L G+ +HG ++K G+E + + AL++ Y
Sbjct: 218 IFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFY 277
Query: 292 VKC-------------------------------GNIRDARSVFDELCSIDLVSWTAMIV 320
+C G I DA VF+ + ++ VS+ MI
Sbjct: 278 CECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIK 337
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
GY G D + +LF F +
Sbjct: 338 GYAVGGQMDDSKRLFEKMPCRTIFSS---------------------------------- 363
Query: 381 YTVINALVDMYAKCHVIADARYIFE-TTSEKDVIAWNSIISGLDDNVSPDAV-------- 431
N ++ +Y++ I A +FE T +EKD + WNS+ISG + P+
Sbjct: 364 ----NTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMH 419
Query: 432 ---------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
T ++ AC+ LG++ G LHA+ K SNVYVGT+L++ Y+KCG
Sbjct: 420 RLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPF-ESNVYVGTSLIDMYSKCGSI 478
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A+ F ++ N W+A+I G+ G G +++LF M+ + + PN F +LSAC
Sbjct: 479 MEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSAC 538
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S G+V EG K F+SM R + P+++HY C+VDLL R+G + EA EF++ MP+E D +
Sbjct: 539 SRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEADGVV 598
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L C + ++GE + +KM P YV++SN+YA GRW VR++++
Sbjct: 599 WGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMMVRKILRG 658
Query: 663 RGLSKSPGCSLVDLD 677
+ K PGCS ++L+
Sbjct: 659 FKVKKDPGCSWIELN 673
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 210/496 (42%), Gaps = 63/496 (12%)
Query: 66 KAFHALLIVDGLTN-DKCNTKLVSMYGSFGHVKYARSVFD-------------------- 104
K H L++ G + + + L+ Y S + AR VFD
Sbjct: 118 KLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTC 177
Query: 105 -----------SMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDN-FVFSK 151
MP D ++ +I + N D +E ++ M + + N F F
Sbjct: 178 NVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDC 237
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
V++AC L + G VH ++K G D + LV+ Y +C I + +V ++
Sbjct: 238 VVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPC 297
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
+ + S+I G + ++ ++FN G E N ++ ++ A + K L
Sbjct: 298 LNALNSLIEGLISMGRIEDAELVFN----GMTEMNPVSYNLMIKGYAVGGQMDDSKRLFE 353
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPD 329
+ I ++ +++ +Y + G I A +F+E + D V+W +MI GY SG P+
Sbjct: 354 KMPCRTIFSSNTMIS----VYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPE 409
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALV 388
+ALKL+ T +++ A + LG+L+ G+++H+ I+ E + +L+
Sbjct: 410 EALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLI 469
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAV 431
DMY+KC I +A+ F + +V AW ++I+G ++ ++P+
Sbjct: 470 DMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGA 529
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
T V V+SAC+ G V G + + ++ + +++ + G + A
Sbjct: 530 TFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKK 589
Query: 492 MR-EKNTVTWSAMIGG 506
M E + V W A++
Sbjct: 590 MPLEADGVVWGALLSA 605
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 140/342 (40%), Gaps = 58/342 (16%)
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-------------- 423
L + N + YAK + AR +F+ ++ V++WN++IS
Sbjct: 29 LSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYS 88
Query: 424 ---DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
++ T SV+S CA L ++ G +H K G S + VG+ALL FYA C
Sbjct: 89 MHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFEL-VGSALLYFYASCF 147
Query: 481 DAQSARMVFDAMREKNTVTWSAM-------------------------------IGGYGM 509
+ AR VFD + +N V WS M I G+
Sbjct: 148 EIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSK 207
Query: 510 QGDG-GGSLALFSDMLNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR-DFKFVP 566
GDG G +L +F M+ E PNE F ++ AC G++ G + + ++ P
Sbjct: 208 NGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDP 267
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
S+ +V+ +++AL + + + P ++ + + G R + E++ M
Sbjct: 268 SIGG--ALVEFYCECEAIDDALRVCKGV-VNPCLNALNSLIEGLISMGRIEDAELVFNGM 324
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
E++P Y L+ YA G+ ++ E M R + S
Sbjct: 325 TEMNP---VSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSS 363
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
Y+ Q LS + A+ N YAK AR +FD M ++ V+W+ MI Y G
Sbjct: 22 YTAHQSNLSEIISTNIAISN-YAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFS 80
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+L L M ++ +E F+++LS C+ + +G
Sbjct: 81 EALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDG 117
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 33 TQHEL--DQTFASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGL-TNDKCNTKL 86
T H L QT ++F +L C GSL + HA LI +N T L
Sbjct: 417 TMHRLSIQQTQSTFSAL--------FHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSL 468
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
+ MY G + A++ F S+ +P+ ++ +I + + L + + + M ++ +
Sbjct: 469 IDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNG 528
Query: 147 FVFSKVLKACCELRDIDEGMKV 168
F VL AC ++EGMK+
Sbjct: 529 ATFVGVLSACSRAGLVNEGMKI 550
>gi|116312013|emb|CAJ86370.1| OSIGBa0117N13.14 [Oryza sativa Indica Group]
gi|116312056|emb|CAJ86420.1| H0303G06.9 [Oryza sativa Indica Group]
Length = 559
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 299/547 (54%), Gaps = 22/547 (4%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
+S +L+ C +G VH + PD + T L+ YA+ D+ ++R++FD
Sbjct: 14 YSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLIIFYARFGDVAAARKMFDGM 73
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++VVSWT+M++GY +N +E L LF MR NQ T GS +ACA G+
Sbjct: 74 PHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGE 133
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+H K + + +AL+DM+++CG++ DAR +F E+ D+VSW A+I G+ + G
Sbjct: 134 QVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERG 193
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVIN 385
+ AL LF+ P+H T+ S L A +G ++HS I+LG ++ VI
Sbjct: 194 HDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIG 253
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--LDDNVSPDA------------- 430
+L++ YAKC ++ AR I+++ SE D+++ ++ISG +D N S DA
Sbjct: 254 SLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLW 313
Query: 431 ---VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
V L SV+ CAS+ + + G+ +HAY K+ + ++ + AL++ YAK G+ A+
Sbjct: 314 IDGVLLSSVLCLCASVASARFGTQIHAYMCKKQSMG-DIALDNALVDMYAKAGEFSDAKR 372
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
FD M +N ++W+++I G G G ++ LF+ M+ + V+PN+V F ++LSAC H G+
Sbjct: 373 AFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGL 432
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
+G + F SM + P +HY +DLLAR G+LE+A + ++ ++P+ S+ GA L
Sbjct: 433 TNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAML 492
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C L+ LGE K + + P + Y +++N+YA W + RE++ + K
Sbjct: 493 GACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGK 552
Query: 668 SPGCSLV 674
G S++
Sbjct: 553 EVGFSVI 559
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 217/451 (48%), Gaps = 21/451 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+TKL+ Y FG V AR +FD MP+ S+ M+ Y N ++ +E + MR
Sbjct: 50 STKLIIFYARFGDVAAARKMFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGA 109
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ F + AC G +VH C D FV + L+DM+ +C + +RQ
Sbjct: 110 RPNQFTYGSAASACAGAGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQ 169
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F E K+VVSW ++I G+V+ + L LF+ M + + + TLGS + AC +
Sbjct: 170 LFAEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGV 229
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+ +H I+K+G ++ +L++ Y KC ++ AR ++D + DLVS TA+I G
Sbjct: 230 AVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISG 289
Query: 322 YT-QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIRLGLE 379
YT Y + A++LF + + V ++SVL A + + G +H+ + + +
Sbjct: 290 YTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQSMG 349
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
D + NALVDMYAK +DA+ F+ ++VI+W S+I+ +
Sbjct: 350 DIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMV 409
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+D V P+ VT +S++SAC G G + + ++ ++ A+ G
Sbjct: 410 EDGVRPNDVTFLSLLSACGHCGLTNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQL 469
Query: 483 QSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
+ A ++V + N+ AM+G + G+
Sbjct: 470 EDAWKLVQKTNLKPNSSMLGAMLGACKLHGN 500
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 14/225 (6%)
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P A S++ C S A + G S+H ++++ T L+ FYA+ GD +AR
Sbjct: 9 PTAPFYSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLIIFYARFGDVAAARK 68
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+FD M ++ V+W+AM+ GY G +L LF+ M +PN+ + + SAC+ G
Sbjct: 69 MFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGC 128
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
G + ++ +F M ++D+ R G +E+A + M + DV + A +
Sbjct: 129 ARSGEQ-VHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMG-KKDVVSWNALI 186
Query: 608 HG----------CGLYSRFDLGEVMIKKMLELHPD-KACYYVLVS 641
G GL+S L E MI L KAC V V+
Sbjct: 187 RGFVERGHDGDALGLFSSM-LKEAMIPDHYTLGSALKACGIVGVA 230
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 189/613 (30%), Positives = 311/613 (50%), Gaps = 30/613 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+S G + YA +F+ P + +I N + + ++ M +
Sbjct: 123 TTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVR 182
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQV 202
HD + F+ VL + C L +D G +VH ++K G + V+ L+ MY + + +V
Sbjct: 183 HDKYTFASVL-SLCSLELLDFGREVHTLVIKTGFLVRASVINALLTMYFNSGKVADAYEV 241
Query: 203 FDETLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
F+E + +++ MI G +E L++F M+E + ++T S++++C+ R
Sbjct: 242 FEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSCSSAR 301
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
HQ +H +K+G E + + A + MY CGN+ VFD L DL+SW +I+
Sbjct: 302 VSHQ---VHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIM 358
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
Y Q + A+ F + A P+ TI S+L++S +L + +M +L + GL
Sbjct: 359 NYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSE---SLEIVKMFQALVSKNGLNS 415
Query: 381 -YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
V NALV ++K I A +F S ++I+WN+IISG L
Sbjct: 416 KIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELL 475
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P+A TL V+S CAS+ A++ G +H Y + G+ S +G AL+ YAKCGD
Sbjct: 476 MSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSV-TSLGNALITMYAKCGDL 534
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSA 541
+ +F+ M ++ V+W+AMI Y G G ++ F M + V+P++ FT +LSA
Sbjct: 535 DWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSA 594
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH G+V +G + F SM D+ F P H C+VDLL RAG LEEA + + ++ S
Sbjct: 595 CSHAGLVDDGTRIFNSMVNDYGFEPGADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSS 654
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ C + LG ++ +LE+ + YVL+SN+YA+ G+W R+LM+
Sbjct: 655 IWWTLFSACAAHGNLRLGRIVAGFLLEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQ 714
Query: 662 QRGLSKSPGCSLV 674
+ ++K PGCS +
Sbjct: 715 KTRVAKQPGCSWI 727
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 143/569 (25%), Positives = 248/569 (43%), Gaps = 94/569 (16%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+F S L AC LR G ++H ++ G + V L+ YAK +D+ S ++VF
Sbjct: 52 DHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVF 111
Query: 204 DETLDKNVVSWTSM-------------------------------IAGYVQNDCAQEGLV 232
+E + +V SWT++ I G +N + L
Sbjct: 112 NEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALN 171
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
LF M + V ++ T S+++ C+ L L G+ +H ++K G + + ++ ALL MY
Sbjct: 172 LFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVINALLTMYF 230
Query: 293 KCGNIRDARSVFDELCSI--DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
G + DA VF+E S D +++ MI G G ++AL +F + + A P +T
Sbjct: 231 NSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTF 290
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSE 409
SV+S+ + + + VH+ I++G E T V NA + MY+ C + +F+ E
Sbjct: 291 VSVMSSCS---SARVSHQVHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEE 347
Query: 410 KDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQVGSSL 452
KD+I+WN II + PD T+ S++++ SL V++
Sbjct: 348 KDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIVKM---F 404
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
A +K G L+S + V AL++ ++K G + A VF+ M N ++W+ +I G+ G
Sbjct: 405 QALVSKNG-LNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGF 463
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK------------------- 553
L F ++L ++PN + +LS C+ + G +
Sbjct: 464 TLQGLEQFYELLMSTLKPNAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNA 523
Query: 554 --CFYSMCRDFKFV---------PSMKHYVCMVDLLARAGRLEEALEFMENMP----IEP 598
Y+ C D + + + M+ A+ G+ +EA+ F + M ++P
Sbjct: 524 LITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQDSGGVKP 583
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
D + F A L C D G + M+
Sbjct: 584 DQATFTAVLSACSHAGLVDDGTRIFNSMV 612
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 198/429 (46%), Gaps = 62/429 (14%)
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+++ + TL S +TACA LR G LH Y ++ G++ +H+ LL Y K ++
Sbjct: 48 YLKPDHFTLSSTLTACANLRYAASGNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSV 107
Query: 301 RSVFDELCSIDLVSWT-------------------------------AMIVGYTQSGYPD 329
+ VF+E+ + D+ SWT A+I G ++ + +
Sbjct: 108 QRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTE 167
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALV 388
AL LF + + T ASVLS + L L+ GR VH+L I+ G L +VINAL+
Sbjct: 168 IALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLVRASVINALL 226
Query: 389 DMYAKCHVIADARYIFE--TTSEKDVIAWNSIISGL-----DDN------------VSPD 429
MY +ADA +FE ++ D I +N +I GL D+ + P
Sbjct: 227 TMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPT 286
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+T VSV+S+C+S +V +HA + K G + V A + Y+ CG+ + MVF
Sbjct: 287 ELTFVSVMSSCSS---ARVSHQVHAQAIKMG-FEACTPVSNAAMTMYSSCGNLHAVHMVF 342
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D + EK+ ++W+ +I Y ++ F M ++P+E ++L++ +V
Sbjct: 343 DRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSESLEIV- 401
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
K F ++ ++ +V ++ G++E+A + NM P++ + + G
Sbjct: 402 ---KMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMS-SPNLISWNTIISG 457
Query: 610 CGLYSRFDL 618
L++ F L
Sbjct: 458 F-LFNGFTL 465
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 316/641 (49%), Gaps = 70/641 (10%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H + I GL N+ L+ MY + A F +P P+ SF M+ +D
Sbjct: 160 HGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQV 219
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCE-------LRDIDE-------GMKVHCEIV 173
+ ++ M + D+ S VL C L D ++ G +VHC +
Sbjct: 220 NEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTI 279
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
K G D + L+DMYAK ++ S+ +F + +VVSW MIAGY Q + + +
Sbjct: 280 KHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIE 339
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
RM+ E ++IT +++ AC +
Sbjct: 340 YLQRMQYHGFEPDEITYVNMLVAC-----------------------------------I 364
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K G+I R +FD + S L SW ++ GY+Q+ +A+KLF + ++ P+ T+A
Sbjct: 365 KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAI 424
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+LS+ A + L GR VH++ + D + + L+ MY+KC + A+ IF+ +E D
Sbjct: 425 ILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELD 484
Query: 412 VIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA 454
++ WNS+++GL N + P + +V+S CA L ++ G +H+
Sbjct: 485 IVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHS 544
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
++G ++ + +VG+AL++ Y+KCGD +AR VFD M KNTVTW+ MI GY G G
Sbjct: 545 QIAREGYMN-DAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGD 603
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
++ L+ DM+ +P+ + F +L+ACSH+G+V G K F SM ++ P + HY C+
Sbjct: 604 EAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCI 663
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
+D L RAGRL EA ++ MP + D ++ L C +Y+ L +++ L P +
Sbjct: 664 IDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNS 723
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
YVL++N+Y+S GRW VRELM + K PG S ++
Sbjct: 724 APYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIE 764
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/612 (23%), Positives = 268/612 (43%), Gaps = 109/612 (17%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY--- 121
K HA ++ L++D + +L+ Y + +R +FD MP D Y++ ++ Y
Sbjct: 25 KLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKA 84
Query: 122 ---------FLNDLYKDIVEF-------------------YKCMRKRLKEHDNFVFSKVL 153
F ++IV + Y M + +F + VL
Sbjct: 85 SELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVL 144
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
AC L D++ G + H +K+G ++ +V L+ MYAKCR IG + Q F + + N V
Sbjct: 145 SACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEV 204
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK-------------- 258
S+T+M+ G +D E LF M + + ++L S++ C++
Sbjct: 205 SFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDV 264
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
L + G+ +H +K G E + HL +LLDMY K GN+ A +F + + +VSW M
Sbjct: 265 LSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVM 324
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I GY Q KA++ ++ F P+ +T ++L A + G++ GR
Sbjct: 325 IAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQ---------- 374
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
+F+ S + +WN+I+SG N
Sbjct: 375 ------------------------MFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREM 410
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
V PD TL ++S+ A + ++ G +HA S K + +++Y+ + L+ Y+KCG
Sbjct: 411 QFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQK-AVFRTDIYLASGLIGMYSKCGK 469
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ A+ +FD + E + V W++M+ G + + F M + + P++ + T+LS
Sbjct: 470 VEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSC 529
Query: 542 CSHTGMVGEGWKCFYSMCRDF----KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
C+ + +G + + R+ FV S ++D+ ++ G ++ A ++ +M +
Sbjct: 530 CAKLSSLSQGRQVHSQIAREGYMNDAFVGS-----ALIDMYSKCGDVDAA-RWVFDMMLG 583
Query: 598 PDVSLFGAFLHG 609
+ + +HG
Sbjct: 584 KNTVTWNEMIHG 595
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 193/432 (44%), Gaps = 72/432 (16%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+E L SL+ C +A GK +H ++L+ + ++ L L++ Y KC I +R
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 302 SVFDELCSID-------------------------------LVSWTAMIVGYTQSGYPDK 330
+FD++ D +VSW +I T++G+ K
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQK 120
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVD 389
AL ++ F P H T+ASVLSA L ++ GR H + I++GL++ + NAL+
Sbjct: 121 ALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLG 180
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVT 432
MYAKC I DA F E + +++ +++ GL D+ + D+V+
Sbjct: 181 MYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVS 240
Query: 433 LVSVISACASLGAVQV--------------GSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
L SV+ C+ G + G +H + K G S++++ +LL+ YAK
Sbjct: 241 LSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHG-FESDLHLNNSLLDMYAK 299
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
G+ SA M+F M E + V+W+ MI GYG + ++ M +P+E+ + +
Sbjct: 300 NGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNM 359
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM---P 595
L AC +G + G + F M PS+ + ++ ++ +EA++ M
Sbjct: 360 LVACIKSGDIEAGRQMFDGMSS-----PSLSSWNTILSGYSQNENHKEAVKLFREMQFRS 414
Query: 596 IEPDVSLFGAFL 607
+ PD + L
Sbjct: 415 VHPDRTTLAIIL 426
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 303/600 (50%), Gaps = 92/600 (15%)
Query: 167 KVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+ H I+K G D ++ L+ Y+ + V D + S++S+I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 226 CAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ + +F+RM G + + + L +L CA+L A GK +H G+++++ +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHV-LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 285 TALLDMYVKCGNIRDARSVFDELCSID--------------------------------- 311
++ MY++CG + DAR VFD + D
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 312 --LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW ++ G+ +SGY +A+ +F F P+ VT++SVL + LNMGR++
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 370 HSLGIRLGL-EDYTVINALVDMYAKC-HV------------------------------I 397
H I+ GL +D VI+A++DMY K HV +
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 398 ADARYIFE----TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSV 436
A +FE T E +V++W SII+G N V P+ VT+ S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ AC ++ A+ G S H ++ + LL NV+VG+AL++ YAKCG +++VF+ M KN
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V W++++ G+ M G +++F ++ ++P+ + FT++LSAC G+ EGWK F
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
M ++ P ++HY CMV+LL RAG+L+EA + ++ MP EPD ++GA L+ C L +
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
DL E+ +K+ L P+ YVL+SN+YA+ G W V+ +R M+ GL K+PGCS + +
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 240/536 (44%), Gaps = 93/536 (17%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA ++ G ND + KL++ Y ++ A V S+P+P YSF +I L+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTG 185
+ + M D+ V + K C EL G ++HC + V G D+FV
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC-VSCVSGLDMDAFVQGS 156
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
+ MY +C +G +R+VFD DK+VV+ ++++ Y + C +E + + + M +E N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 246 -----------------------------------QITLGSLVTACAKLRALHQGKWLHG 270
Q+T+ S++ + L+ G+ +HG
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE-------LCS-------------- 309
Y++K G+ + +++A++DMY K G++ S+F++ +C+
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 310 --------------IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+++VSWT++I G Q+G +AL+LF + + A PNHVTI S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A + L GR H +R+ L D V +AL+DMYAKC I ++ +F K+++
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 415 WNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
WNS+++G + + PD ++ S++SAC +G G +
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
++ + + + ++N + G Q A + M E ++ W A++ +Q +
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 129/293 (44%), Gaps = 39/293 (13%)
Query: 66 KAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFD-------------------- 104
+ H +I GL DKC + ++ MYG GHV S+F+
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 105 -----SMPNPDFYSFQVM----IRWYFL------NDLYKDIVEFYKCMRKRLKEHDNFVF 149
++ + + Q M + W + N + +E ++ M+ + ++
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLD 208
+L AC + + G H V+V D+ V + L+DMYAKC I S+ VF+
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KW 267
KN+V W S++ G+ + A+E + +F + ++ + I+ SL++AC ++ +G K+
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMI 319
+ GI+ + ++++ + G +++A + E+ D W A++
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 46 SLPSIPCLNLLGLCKSTGSLKAFHALLI-VDGLTNDKCNTKLVSMYGSFGHVKYARSVFD 104
++PS+ L G + G ++ H + V L N + L+ MY G + ++ VF+
Sbjct: 390 TIPSM--LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC-MRKRLKEHDNFVFSKVLKACCELRDID 163
MP + + ++ + ++ K+++ ++ MR RLK D F+ +L AC ++ D
Sbjct: 448 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP-DFISFTSLLSACGQVGLTD 506
Query: 164 EGMK 167
EG K
Sbjct: 507 EGWK 510
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/632 (28%), Positives = 317/632 (50%), Gaps = 24/632 (3%)
Query: 66 KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HA + GL N + L+++Y G + A VFD + + M+ N
Sbjct: 220 RQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRN 279
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVL 183
+ + ++ + M++ E D F + VL AC L G +V C +K S FV
Sbjct: 280 EYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVA 339
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+DM++K I ++ +F+ K+ VSW +++ G N+ +E + + M V
Sbjct: 340 NATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVT 399
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
++++ +++ AC+ +RA GK +H +K I N + ++L+D Y K G++ R V
Sbjct: 400 PDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKV 459
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
++ + +V +I G Q+ D+A+ LF P+ T +S+LS L +
Sbjct: 460 LAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSS 519
Query: 364 NMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIIS 420
+G+ VH ++ G +D +V +LV Y K + DA + + E K+++ W +I+S
Sbjct: 520 IIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVS 579
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G N V PD VT S++ AC+ + A+ G +H K G S
Sbjct: 580 GYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGS 639
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMIGGYGMQGDGGGSLALFSD 522
+A+++ Y+KCGD S+ F ++ K +T W++MI G+ G +L LF
Sbjct: 640 YKTAT-SAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQK 698
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M + +++ +EV F +L AC+H G++ EG F SM + + +P + HY C +DLL R G
Sbjct: 699 MQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGRGG 758
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
L+EA E + +P PD ++ +L C ++ + GE+ K+++EL P + YVL+SN
Sbjct: 759 HLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEPQNSSTYVLLSN 818
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+YA+ G W+ RE M+++G +K PGCS +
Sbjct: 819 MYAAAGNWVEAKMAREAMREKGATKFPGCSWI 850
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 274/597 (45%), Gaps = 63/597 (10%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
C LV+MY G V AR VF + PD + MI Y +++ V + M K
Sbjct: 68 CAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMG 127
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
D V+ A L +++ + + ++ P S
Sbjct: 128 SSPDRVTCVAVVCALTALGRLEDARTL---LHRMPAPSS--------------------- 163
Query: 202 VFDETLDKNVVSWTSMIAGYVQND-CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
V+W ++I+GY Q E L+ MR + + T S+++A A
Sbjct: 164 ---------TVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANAT 214
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
A +G+ +H ++ G++ N + ++L+++Y KCG I DA VFD ++V W AM+
Sbjct: 215 AFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLN 274
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
G ++ Y +A+++F K + T SVL A A L + +GR V + I+ ++
Sbjct: 275 GLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDA 334
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD---------------- 423
V NA +DM++K I DA+ +F + KD ++WN+++ GL
Sbjct: 335 SLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMN 394
Query: 424 -DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
D V+PD V+ +VI+AC+++ A + G +H + K + SN VG++L++FY+K GD
Sbjct: 395 LDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHS-ICSNHAVGSSLIDFYSKHGDV 453
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+S R V + + V + +I G ++ LF +L + ++P+ F++ILS C
Sbjct: 454 ESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGC 513
Query: 543 SH--TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
+ + ++G+ C Y++ F V +V +A E+A + + MP ++
Sbjct: 514 TGLLSSIIGKQVHC-YTLKSGF-LNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNL 571
Query: 601 SLFGAFLHGCGL--YSRFDLGEVMIKKMLELHPDKACYYVLV---SNLYA-SDGRWI 651
+ A + G YS L + ++HPD+ + ++ S + A SDG+ I
Sbjct: 572 VEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEI 628
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 225/472 (47%), Gaps = 78/472 (16%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D F + L AC L + G + HC+ K G G +F LV+MYA+C +G +R+VF
Sbjct: 30 DQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVF 89
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ V W SMI+GY + QE + LF RM + +++T ++V A
Sbjct: 90 GGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCA-------- 141
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGY 322
+TAL G + DAR++ + V+W A+I GY
Sbjct: 142 --------------------LTAL-------GRLEDARTLLHRMPAPSSTVAWNAVISGY 174
Query: 323 T-QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
QSG + L+ D + +P T AS+LSA+A GR VH+ +R GL+ +
Sbjct: 175 AQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDAN 234
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V ++L+++YAKC I DA +F+ + EK+V+ WN++++GL N
Sbjct: 235 VFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKR 294
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ D T VSV+ ACA L + +G + + K + ++++V A L+ ++K G
Sbjct: 295 LGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKN-CMDASLFVANATLDMHSKFGAID 353
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A+ +F+ + K+TV+W+A++ G + ++ + M + V P+EV F T+++ACS
Sbjct: 354 DAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACS 413
Query: 544 H--TGMVGEGWKCFYSMCRDFKFVPSMKHYVC--------MVDLLARAGRLE 585
+ G+ C +MKH +C ++D ++ G +E
Sbjct: 414 NIRATETGKQIHCL-----------AMKHSICSNHAVGSSLIDFYSKHGDVE 454
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 154/306 (50%), Gaps = 18/306 (5%)
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
G V +Q L + ++AC++L AL GK H K G+ + AL++MY +CG + D
Sbjct: 25 GGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGD 84
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
AR VF + D V W +MI GY ++G +A+ LFT + P+ VT +V+ A
Sbjct: 85 ARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTA 144
Query: 360 LGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
LG L R +L R+ TV NA++ YA+ I + KD+ W
Sbjct: 145 LGRLEDAR---TLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGL----YKDMRCW--- 194
Query: 419 ISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ P T S++SA A+ A G +HA + + G L +NV+VG++L+N YAK
Sbjct: 195 ------GLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHG-LDANVFVGSSLINLYAK 247
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG A +VFD EKN V W+AM+ G ++ +F M ++ +E + ++
Sbjct: 248 CGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSV 307
Query: 539 LSACSH 544
L AC+H
Sbjct: 308 LGACAH 313
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V PD L + +SAC+ LGA+ G H + K+GL S + AL+N YA+CG A
Sbjct: 27 VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGL-GSGAFCAAALVNMYARCGRVGDA 85
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R VF + +TV W++MI GY G ++ LF+ M P+ V ++ A +
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL 145
Query: 546 GMVGEGWKCFYSM 558
G + + + M
Sbjct: 146 GRLEDARTLLHRM 158
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 316/641 (49%), Gaps = 70/641 (10%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H + I GL N+ L+ MY + A F +P P+ SF M+ +D
Sbjct: 131 HGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQV 190
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCE-------LRDIDE-------GMKVHCEIV 173
+ ++ M + D+ S VL C L D ++ G +VHC +
Sbjct: 191 NEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTI 250
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
K G D + L+DMYAK ++ S+ +F + +VVSW MIAGY Q + + +
Sbjct: 251 KHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIE 310
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
RM+ E ++IT +++ AC +
Sbjct: 311 YLQRMQYHGFEPDEITYVNMLVAC-----------------------------------I 335
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
K G+I R +FD + S L SW ++ GY+Q+ +A+KLF + ++ P+ T+A
Sbjct: 336 KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAI 395
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+LS+ A + L GR VH++ + D + + L+ MY+KC + A+ IF+ +E D
Sbjct: 396 ILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELD 455
Query: 412 VIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA 454
++ WNS+++GL N + P + +V+S CA L ++ G +H+
Sbjct: 456 IVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHS 515
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
++G ++ + +VG+AL++ Y+KCGD +AR VFD M KNTVTW+ MI GY G G
Sbjct: 516 QIAREGYMN-DAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGD 574
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
++ L+ DM+ +P+ + F +L+ACSH+G+V G K F SM ++ P + HY C+
Sbjct: 575 EAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCI 634
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
+D L RAGRL EA ++ MP + D ++ L C +Y+ L +++ L P +
Sbjct: 635 IDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNS 694
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
YVL++N+Y+S GRW VRELM + K PG S ++
Sbjct: 695 APYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIE 735
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 142/583 (24%), Positives = 265/583 (45%), Gaps = 80/583 (13%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA ++ L++D + +L+ Y + +R +FD MP D Y++ ++ Y
Sbjct: 25 KLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKA 84
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLK--ACCELRDIDEGMKVHCEIVKVGGPDS-F 181
+D + M +R N + S + + AC L D++ G + H +K+G ++ +
Sbjct: 85 SELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIY 144
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V L+ MYAKCR IG + Q F + + N VS+T+M+ G +D E LF M
Sbjct: 145 VGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNR 204
Query: 242 VEGNQITLGSLVTACAK--------------LRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ + ++L S++ C++ L + G+ +H +K G E + HL +L
Sbjct: 205 IHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSL 264
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
LDMY K GN+ A +F + + +VSW MI GY Q KA++ ++ F P+
Sbjct: 265 LDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDE 324
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETT 407
+T ++L A + G++ GR +F+
Sbjct: 325 ITYVNMLVACIKSGDIEAGRQ----------------------------------MFDGM 350
Query: 408 SEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGS 450
S + +WN+I+SG N V PD TL ++S+ A + ++ G
Sbjct: 351 SSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGR 410
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+HA S K + +++Y+ + L+ Y+KCG + A+ +FD + E + V W++M+ G +
Sbjct: 411 QVHAVSQK-AVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLN 469
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF----KFVP 566
+ F M + + P++ + T+LS C+ + +G + + R+ FV
Sbjct: 470 SLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVG 529
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
S ++D+ ++ G ++ A ++ +M + + + +HG
Sbjct: 530 S-----ALIDMYSKCGDVDAA-RWVFDMMLGKNTVTWNEMIHG 566
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 187/403 (46%), Gaps = 43/403 (10%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+E L SL+ C +A GK +H ++L+ + ++ L L++ Y KC I +R
Sbjct: 1 METKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASR 60
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL--SASAQ 359
+FD++ D+ +W A++ Y ++ + A LF + + + I+++ A
Sbjct: 61 RLFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGA 120
Query: 360 LGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L ++ GR H + I++GL++ + NAL+ MYAKC I DA F E + +++ ++
Sbjct: 121 LVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAM 180
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV------------- 448
+ GL D+ + D+V+L SV+ C+ G +
Sbjct: 181 MGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDV 240
Query: 449 -GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G +H + K G S++++ +LL+ YAK G+ SA M+F M E + V+W+ MI GY
Sbjct: 241 HGQQVHCLTIKHG-FESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGY 299
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G + ++ M +P+E+ + +L AC +G + G + F M PS
Sbjct: 300 GQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSS-----PS 354
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFL 607
+ + ++ ++ +EA++ M + PD + L
Sbjct: 355 LSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIIL 397
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 4/132 (3%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
+L C SL + H+ + +G ND + L+ MY G V AR VFD M +
Sbjct: 497 VLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKN 556
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
++ MI Y N + V Y+ M ++ D F VL AC +D G+K+
Sbjct: 557 TVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFN 616
Query: 171 EIVKVGGPDSFV 182
+ + G + V
Sbjct: 617 SMQQEHGVEPLV 628
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 208/700 (29%), Positives = 336/700 (48%), Gaps = 127/700 (18%)
Query: 56 LGLCKSTGSL---KAFHALLIVDGLTND--KCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
LG C + GS+ + H L + G+ + +L+ MY ++ A+ +F+ MP +
Sbjct: 13 LGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEMPKRN 72
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+S+ MI Y + +E + M +
Sbjct: 73 CFSWNTMIEGYLKSGSKGKSLELFDSMPHK------------------------------ 102
Query: 171 EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
D+F ++ +AK ++ +R++F+E KN ++W SMI GY N +E
Sbjct: 103 --------DAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEA 154
Query: 231 LVLFNRMREGFVE---GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ LF + +E G+ L ++V AC L AL GK +H I+ +E +S L ++L
Sbjct: 155 VGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSL 214
Query: 288 LDMYVKCGNI-------------------------------RDARSVFDELCSIDLVSWT 316
+++Y KCG+I DAR +F + +V W
Sbjct: 215 VNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWN 274
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
+MI GY + +AL+LF + + ++ T ASVLSA + LG ++ G VH+ ++
Sbjct: 275 SMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKV 334
Query: 377 GLEDYTVIN-ALVDMYAKCHV-------------------------------IADARYIF 404
G + +I+ ALVDMY+KC I DAR IF
Sbjct: 335 GFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIF 394
Query: 405 ETTSEKDVIAWNSIISGLDDNVSP-----------------DAVTLVSVISACASLGAVQ 447
+T K +I+WNS+I G N P D +L VISACAS+ +++
Sbjct: 395 DTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLE 454
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G + A +T GL + + T+L++FY KCG + R +FD M + + V W++M+ GY
Sbjct: 455 LGEQIFARATIIGLEFDQI-ISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGY 513
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G G +L +F M + VQP ++ F +LSAC H G+V EG K FY+M D+ P
Sbjct: 514 ATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPG 573
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
++HY CMVDL ARAG LE+A+ +E MP++ D S++ + L GC + LG+ + K+++
Sbjct: 574 IEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRII 633
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
+L P+ + YV +S +YA+ W R QVR+LM + + K
Sbjct: 634 DLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYDKKIPK 673
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/506 (29%), Positives = 280/506 (55%), Gaps = 23/506 (4%)
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
+ + ++ +R VFDE ++VVSW +MI+GYV + F+ M++ + + T
Sbjct: 786 FVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTY 845
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELC 308
+L++ + + +GK +H +++ G+++++ +V +L+ MY K G + A VF +
Sbjct: 846 STLLSFVS---SACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITME 902
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
+D++SW ++I +SGY + AL+ F + + P+ T+++V++ + L +L G
Sbjct: 903 ELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQ 962
Query: 369 VHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------ 421
+ +L IR+G L + V +A +D+++KC+ + D+ +FE + D + N++IS
Sbjct: 963 IFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGF 1022
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
L +N+ P TL V+SA + L V GS +H+ K GL S+V V +
Sbjct: 1023 GENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGL-ESDVIVAS 1081
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
+L+ YAK G SA F + ++ ++W+ MI G G +L +F ++L P
Sbjct: 1082 SLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPP 1141
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
+E+ +L AC+ G+V EG F SM +++ +P+++HY C+VD+++R G+L+EA++
Sbjct: 1142 DEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDI 1201
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
+E MP EP ++G+ L C +Y E + ++++EL P + Y++++ Y GRW
Sbjct: 1202 VELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRW 1261
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +V MK++G+ K GCS + +
Sbjct: 1262 ESLVRVXRAMKEKGVRKVIGCSWIGI 1287
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 203/440 (46%), Gaps = 76/440 (17%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
++G C + G+L K HA ++VD + D + LV++YG G + A V + M PD
Sbjct: 179 VVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPD 238
Query: 111 FYSFQV-------------------------------MIRWYFLNDLYKDIVEFYKCMRK 139
+S MI Y N+ + +E + MR+
Sbjct: 239 AFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRR 298
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCR---- 194
+ + D F+ VL AC L ID+G++VH + KVG + ++ + LVDMY+KCR
Sbjct: 299 KGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDD 358
Query: 195 ---------------------------DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
I +RQ+FD K+++SW SMI G+ QN C
Sbjct: 359 ACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACP 418
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E L LF M + + ++ +L +++ACA + +L G+ + IG+E + + T+L
Sbjct: 419 IEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSL 478
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+D Y KCG + R +FD + D V W +M++GY +G+ +AL +F + P
Sbjct: 479 VDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTD 538
Query: 348 VTIASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARY 402
+T VLSA G + GR M I G+E Y+ +VD+YA+ ++ DA
Sbjct: 539 ITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYS---CMVDLYARAGLLEDAMN 595
Query: 403 IFETTSEK-DVIAWNSIISG 421
+ E K D W+S++ G
Sbjct: 596 LIEQMPLKADTSMWSSVLRG 615
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 213/445 (47%), Gaps = 32/445 (7%)
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
FG ++ AR VFD MP D S+ MI Y L+ D F+ M+K F +S +
Sbjct: 789 FGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTL 848
Query: 153 LK----ACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDET 206
L AC G ++H +++ G S V+ G L+ MY K + + VF
Sbjct: 849 LSFVSSAC-------RGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITM 901
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+ +++SW S+I ++ L F MR +Q T+ +++T C+ L+ L +G+
Sbjct: 902 EELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGE 961
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+ +++G NS + +A +D++ KC + D+ VF+E+ D V AMI Y G
Sbjct: 962 QIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHG 1021
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
+ + AL+LF + P T++ VLSA + L ++ G +HSL ++ GLE D V +
Sbjct: 1022 FGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVAS 1081
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSP 428
+LV+MYAK +I A F +D+I+WN++I GL N P
Sbjct: 1082 SLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPP 1141
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D +TL V+ AC G V G S+ + K+ + + +++ ++ G + A +
Sbjct: 1142 DEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDI 1201
Query: 489 FDAM-REKNTVTWSAMIGGYGMQGD 512
+ M E + + W +++ + GD
Sbjct: 1202 VELMPHEPSGLIWGSLLCACEIYGD 1226
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 174/694 (25%), Positives = 284/694 (40%), Gaps = 109/694 (15%)
Query: 94 GHVKYARSVFDSMP-----NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
G V+ R F +M NP + M+ Y L +D + + M + D +
Sbjct: 552 GLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLK---ADTSM 608
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+S VL+ C + G KV I+ + +S L +YA D G S QV D
Sbjct: 609 WSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQVRKLMYD 668
Query: 209 KNVVSWTSM-IAGYVQNDCAQEGL------VLFNRMREGFV------------EGNQITL 249
K + TS IAG + EGL V + R+ V E +Q +
Sbjct: 669 KKIPKDTSFDIAG----EEGXEGLSSETKEVTKMKQRQNLVLRLVAEKKRECDERDQKFM 724
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA--------------------LLD 289
+ T + G H ++ +++ S L T L
Sbjct: 725 AARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLK 784
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
+V+ G + AR VFDE+ D+VSW MI GY G D A + F++ + A P+ T
Sbjct: 785 AFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFT 844
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETT 407
+++LS + + G+ +H+ IR G L + V N+L+ MY K V+ A +F T
Sbjct: 845 YSTLLSF---VSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITM 901
Query: 408 SEKDVIAWNSII-----SGLDD------------NVSPDAVTLVSVISACASLGAVQVGS 450
E D+I+WNS+I SG + SPD T+ +VI+ C++L ++ G
Sbjct: 902 EELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGE 961
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
+ A + G LS+++ V +A ++ ++KC + + VF+ + + ++V +AMI Y
Sbjct: 962 QIFALCIRVGFLSNSI-VSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWH 1020
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWK------ 553
G G +L LF L E ++P E + +LSA S H+ +V G +
Sbjct: 1021 GFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVA 1080
Query: 554 -CFYSMCRDFKFVPS-MKHYV-----------CMVDLLARAGRLEEALEFMENMPI---E 597
M F + S MK + M+ LA GR+ +ALE + + I
Sbjct: 1081 SSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPP 1140
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP--DKACYYVLVSNLYASDGRWIRVNQ 655
PD L C + D G + M + + +Y + ++ + G+
Sbjct: 1141 PDEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMD 1200
Query: 656 VRELMKQRGLSKSPGCSLVDLDIANDFSFSRVVS 689
+ ELM G L +I D F+ V+
Sbjct: 1201 IVELMPHEPSGLIWGSLLCACEIYGDLRFTERVA 1234
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 182/375 (48%), Gaps = 14/375 (3%)
Query: 55 LLGLCKSTGSLKAFHALLIVDG--LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
LL S K HA +I +G L+N L+ MYG FG V YA VF +M D
Sbjct: 848 LLSFVSSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDII 907
Query: 113 SFQVMIRWYFLNDLYKDI-VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ +I W Y+++ + + MR D F S V+ C L+D+++G ++
Sbjct: 908 SWNSLI-WSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFAL 966
Query: 172 IVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
++VG +S V + +D+++KC + S +VF+E + V +MI+ Y + +
Sbjct: 967 CIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENA 1026
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L LF + + TL +++A + L + QG +H ++K G+E + + ++L++M
Sbjct: 1027 LQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEM 1086
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y K G I A F ++ + DL+SW MI+G +G KAL++F + P+ +T+
Sbjct: 1087 YAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITL 1146
Query: 351 ASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFE 405
A VL A G ++ G M G+ +E Y I VDM ++ + +A I E
Sbjct: 1147 AGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACI---VDMMSRGGKLKEAMDIVE 1203
Query: 406 -TTSEKDVIAWNSII 419
E + W S++
Sbjct: 1204 LMPHEPSGLIWGSLL 1218
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 178/431 (41%), Gaps = 123/431 (28%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA--LLDMYVKCGNIRDARSVFD 305
+L + +C ++++G+ LH LK G+ ++S L LL MY +C ++R+A+ +F+
Sbjct: 8 SLARQLGSCNNYGSIYRGRXLHILFLKSGV-LHSVLSIGNRLLQMYSRCNSMREAQQLFE 66
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ + SW MI GY +SG K+L+LF D F +V V+S A+ GNL +
Sbjct: 67 EMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNV----VISGFAKEGNLEV 122
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
AR +F K+ IAWNS+I G N
Sbjct: 123 ----------------------------------ARRLFNEMPWKNGIAWNSMIHGYACN 148
Query: 426 VSP--------------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
P D L +V+ AC +LGA+ G +HA + +
Sbjct: 149 GRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDS 208
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNT---------------------------- 497
V +G++L+N Y KCGD SA V + M+E +
Sbjct: 209 V-LGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSN 267
Query: 498 ---VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
V W++MI GY + +L LF++M + VQ + F ++LSACS G++ +G +
Sbjct: 268 XCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQV 327
Query: 555 ---------------------FYSMCRD----FKFVPSMKHY-----VCMVDLLARAGRL 584
YS CR K ++ Y M+ + + GR+
Sbjct: 328 HAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRI 387
Query: 585 EEALEFMENMP 595
++A + + MP
Sbjct: 388 DDARQIFDTMP 398
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 22/247 (8%)
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V D +L + +C + G++ G LH K G+L S + +G LL Y++C + A
Sbjct: 2 VDLDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREA 61
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ +F+ M ++N +W+ MI GY G G SL LF M +++ + ++S +
Sbjct: 62 QQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDA----FSWNVVISGFAKE 117
Query: 546 GMVGEGWKCFYSM-CRDFKFVPSMKH-YVCMVDLLARAGRLEEALEFMENMPIEP----- 598
G + + F M ++ SM H Y C GR +EA+ +++ + P
Sbjct: 118 GNLEVARRLFNEMPWKNGIAWNSMIHGYAC-------NGRPKEAVGLFKDLSLNPLERFC 170
Query: 599 -DVSLFGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVSNLYASDGRWIRVNQ 655
D + + C D G+ + +++ E+ D LV NLY G N
Sbjct: 171 GDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLV-NLYGKCGDIDSANH 229
Query: 656 VRELMKQ 662
V LMK+
Sbjct: 230 VLNLMKE 236
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 178/470 (37%), Positives = 264/470 (56%), Gaps = 21/470 (4%)
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+E L F RM + + L + + +CAKL G +H I++ G E N L +AL
Sbjct: 83 REALESFWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSAL 142
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+D+Y KC I DA+ VFD + D VSWT++I G++++G +A+ F + + PN
Sbjct: 143 VDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKPNC 202
Query: 348 VTIASVLSASAQLGNL-NMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFE 405
VT SV+SA L + + ++H+ ++LG T V++ L+D Y+KC I A +F
Sbjct: 203 VTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLLFG 262
Query: 406 TTSEKDVIAWNSIISGLDDNV-----------------SPDAVTLVSVISACASLGAVQV 448
TT E+D I +NS+ISG N+ +P TL S+++AC SL +Q
Sbjct: 263 TTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQ 322
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H+ K G SNV+V +ALL+ Y+KCG AR VFD EKNTV W++MI GY
Sbjct: 323 GRQVHSLVAKMGS-ESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYA 381
Query: 509 MQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
G G L LF ++ EE P+ + FT +L+AC+H G + +G F M RD+ VP
Sbjct: 382 QSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPD 441
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
+ Y C+VDL R G L +A E ME +P EP+ ++G+FL C LY +LG K+
Sbjct: 442 LDQYACLVDLYVRNGHLRKAKELMEAIPCEPNSVMWGSFLSSCKLYGEAELGREAADKLF 501
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
++ P YV ++++YA G W V ++R+LMKQ+GL KS G S V++D
Sbjct: 502 KMEPCSTAPYVAMASIYAQAGLWSEVVEIRKLMKQKGLRKSAGWSWVEVD 551
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 215/446 (48%), Gaps = 34/446 (7%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA +I G ++ N+ LV +Y + A+ VFD M D S+ +I + N
Sbjct: 123 IHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGR 182
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI-DEGMKVHCEIVKVG-GPDSFVLT 184
K+ + F+K M + + + V+ AC L I D+ +H +VK+G G +FV++
Sbjct: 183 GKEAILFFKEMLGSQIKPNCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVS 242
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+D Y+KC I + +F T++++ + + SMI+GY QN +E L LF MR +
Sbjct: 243 CLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLFGEEALKLFVEMRNNGLNP 302
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
TL S++ AC L L QG+ +H + K+G E N +V+ALLDMY KCG+I +AR VF
Sbjct: 303 TDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVF 362
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNL 363
D+ + V WT+MI GY QSG + L LF + F P+H+ +VL+A G L
Sbjct: 363 DQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVTEEGFTPDHICFTAVLTACNHAGFL 422
Query: 364 NMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+ G +M G+ L+ Y LVD+Y + + A+ + E
Sbjct: 423 DKGIDYFNQMRRDYGLVPDLDQYA---CLVDLYVRNGHLRKAKELMEAIP---------- 469
Query: 419 ISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
P++V S +S+C G ++G K S+ YV A+ + YA+
Sbjct: 470 -------CEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYV--AMASIYAQ 520
Query: 479 CGDAQSARMVFDAMREK---NTVTWS 501
G + M++K + WS
Sbjct: 521 AGLWSEVVEIRKLMKQKGLRKSAGWS 546
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/648 (29%), Positives = 334/648 (51%), Gaps = 33/648 (5%)
Query: 53 LNLLGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+++L C++ L+ H+ + G +D +T L++MY G ++ AR VF+ M
Sbjct: 156 ISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRE 215
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ S+ MI Y + K+ ++ + + + + F+ +L AC D+++G+K+
Sbjct: 216 RNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKL 275
Query: 169 HCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
H I K G + VL G L+ MYA+C + ++RQVFD N VSW +MIAGY +
Sbjct: 276 HAYI-KQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEG-F 333
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+E LF M++ + ++ T SL+ CA L++GK LH I++ E + + TA
Sbjct: 334 MEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATA 393
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ MY KCG++ +AR VF+++ + VSW A I + G +A ++F + D P+
Sbjct: 394 LISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPD 453
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFE 405
HVT ++L++ + GR +H + G L + V NAL+ MY +C +ADAR +F
Sbjct: 454 HVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFY 513
Query: 406 TTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQV 448
+D+ +WN++I+ + D T ++V+ A A+L +
Sbjct: 514 RIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDA 573
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H K GL ++ + T L+ Y+KCG + A VF ++EK+ V W+AM+ Y
Sbjct: 574 GRKIHGLVEKAGL-EKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYN 632
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G +L LF M E V P+ +T++L+AC+ G + G K F++ ++
Sbjct: 633 HSDHGQDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHG-KKFHTQLKEAAMETDT 691
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY CMV L RA L+EA EF+E + E D ++ + L C ++ L E ++ +L+
Sbjct: 692 RHYACMVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLD 751
Query: 629 LHPDKA---CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
+ + C ++ N+YA+ GRW V+ ++ M++ GL C++
Sbjct: 752 VKAQSSPAVCEQLM--NIYAAAGRWEDVSVIKATMREAGLLAPKSCTI 797
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 190/579 (32%), Positives = 311/579 (53%), Gaps = 33/579 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRL 141
N L+SMY G ++ A +VF SM + D S+ MI Y L+ ++ V+ FY+ R+ L
Sbjct: 89 NNMLISMYSKCGSIEDANNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGL 148
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
K + N F +L AC ++ G ++H I K G D V T L++MY KC + +R
Sbjct: 149 KPNQN-SFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELAR 207
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VF+E ++NVVSWT+MI+GYVQ+ ++E VLF ++ + N+++ S++ AC
Sbjct: 208 KVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPN 267
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L QG LH YI + G+E + AL+ MY +CG++ +AR VFD L S + VSW AMI
Sbjct: 268 DLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIA 327
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
GY + G+ ++A +LF D + F P+ T AS+L+ A +LN G+ +HS +R E
Sbjct: 328 GYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEA 386
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLD----------- 423
D TV AL+ MYAKC + +AR +F EK+ ++WN+ I+ G +
Sbjct: 387 DVTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMR 446
Query: 424 -DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
D+V PD VT ++++++C S + G +H + G+LS+N+ V AL++ Y +CG
Sbjct: 447 RDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNL-VANALISMYGRCGKL 505
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
AR VF +R ++ +W+AMI Y G G + LF +E + ++ F +L A
Sbjct: 506 ADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAI 565
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
++ + G K + + ++ ++ + ++ G L +A +N+ E DV
Sbjct: 566 ANLEDLDAGRK-IHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQ-EKDVVC 623
Query: 603 FGAFLHGCGLYSRFDLGEVMIK-----KMLELHPDKACY 636
+ A L Y+ D G+ +K ++ ++PD A Y
Sbjct: 624 WNAML---AAYNHSDHGQDALKLFQQMRLEGVNPDSATY 659
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 142/416 (34%), Positives = 228/416 (54%), Gaps = 20/416 (4%)
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
NF +++ L+ C + + + EG KVH + PD ++ L+ MY+KC I + VF
Sbjct: 52 NF-YARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQ 110
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
DK+VVSW +MI+GY + QE + LF +M+ ++ NQ + S+++AC L
Sbjct: 111 SMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEF 170
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +H +I K G E + ++ TAL++MY KCG++ AR VF+E+ ++VSWTAMI GY Q
Sbjct: 171 GEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQ 230
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
G +A LF + PN V+ AS+L A +L G +H+ + GLE ++
Sbjct: 231 HGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLV 290
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD----------------NVS 427
NAL+ MYA+C +A+AR +F+ + ++WN++I+G +
Sbjct: 291 GNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFMEEAFRLFRDMQQKGFQ 350
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD T S+++ CA + G LH+ + ++V V TAL++ YAKCG + AR
Sbjct: 351 PDRFTYASLLAICADRADLNRGKELHSQIVRTA-WEADVTVATALISMYAKCGSLEEARK 409
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
VF+ M EKN V+W+A I G + +F M ++V P+ V F T+L++C+
Sbjct: 410 VFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCT 465
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 291/543 (53%), Gaps = 65/543 (11%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H +V G S F+ T LV++YA D+ SR FD+ K+V +W SMI+ YV N
Sbjct: 38 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGH 97
Query: 227 AQEG------LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
E L+L + +R F T ++ AC L G+ +H + K+G + N
Sbjct: 98 FHEAIGCFYQLLLVSEIRPDFY-----TFPPVLKACGTLV---DGRKIHCWAFKLGFQWN 149
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
+ +L+ MY + G ARS+FD++ D+ SW AMI G Q+G +AL + + +
Sbjct: 150 VFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 209
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA 400
N VT+ S+L VDMYAK ++ A
Sbjct: 210 EGIKMNFVTVVSILP------------------------------VFVDMYAKLGLLDSA 239
Query: 401 RYIFETTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACAS 442
+FE KDVI+WN++I+G N + P+ T VS++ A A
Sbjct: 240 HKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAH 299
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
+GA+Q G +H K L +V+V T L++ Y KCG A +F + ++++VTW+A
Sbjct: 300 VGALQQGMKIHGRVIKTN-LHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNA 358
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
+I +G+ G +L LF +ML+E V+P+ V F ++LSACSH+G V EG CF M +++
Sbjct: 359 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEY 417
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
PS+KHY CMVDLL RAG LE A +F+++MP++PD S++GA L C ++ +LG+
Sbjct: 418 GIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFA 477
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDF 682
++ E+ YYVL+SN+YA+ G+W V++VR L ++RGL K+PG S ++++ D
Sbjct: 478 SDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDV 537
Query: 683 SFS 685
++
Sbjct: 538 FYT 540
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 223/470 (47%), Gaps = 58/470 (12%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HALL+V G +T+LV++Y + G V +R FD +P D Y++ MI Y N
Sbjct: 36 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHN 95
Query: 125 DLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFV 182
+ + + FY+ + D + F VLKAC L D G K+HC K+G + FV
Sbjct: 96 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFV 152
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
L+ MY++ G +R +FD+ +++ SW +MI+G +QN A + L + + MR +
Sbjct: 153 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMR---L 209
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
EG ++ ++V+ ++ +DMY K G + A
Sbjct: 210 EGIKMNFVTVVS----------------------------ILPVFVDMYAKLGLLDSAHK 241
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQLG 361
VF+ + D++SW +I GY Q+G +A++++ ++ + PN T S+L A A +G
Sbjct: 242 VFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVG 301
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L G +H I+ L D V L+D+Y KC + DA +F ++ + WN+IIS
Sbjct: 302 ALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIIS 361
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
LD+ V PD VT VS++SAC+ G V+ G + G+
Sbjct: 362 CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKP 421
Query: 464 SNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
S + G +++ + G + A + D + + W A++G + G+
Sbjct: 422 SLKHYG-CMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 470
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 189/426 (44%), Gaps = 60/426 (14%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY FG ARS+FD MP D S+ MI N ++ MR
Sbjct: 156 LIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL------ 209
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
EG+K++ V +L VDMYAK + S+ +VF+
Sbjct: 210 ------------------EGIKMNFVTVVS------ILPVFVDMYAKLGLLDSAHKVFEI 245
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQ 264
K+V+SW ++I GY QN A E + ++ M E + NQ T S++ A A + AL Q
Sbjct: 246 IPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQ 305
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G +HG ++K + ++ + T L+D+Y KCG + DA S+F ++ V+W A+I +
Sbjct: 306 GMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGI 365
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG----RMVHSLGIRLGLED 380
G+ +K LKLF + P+HVT S+LSA + G + G R++ GI+ L+
Sbjct: 366 HGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKH 425
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISAC 440
Y +VD+ + + A D I D + PDA +++ AC
Sbjct: 426 Y---GCMVDLLGRAGYLEMAY---------DFIK--------DMPLQPDASIWGALLGAC 465
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE---KNT 497
G +++G A + S NV L N YA G + V RE K T
Sbjct: 466 RIHGNIELGK--FASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKT 523
Query: 498 VTWSAM 503
WS +
Sbjct: 524 PGWSTI 529
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 200/426 (46%), Gaps = 42/426 (9%)
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
K LH ++ G + + T L+++Y G++ +R FD++ D+ +W +MI Y
Sbjct: 35 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94
Query: 325 SGYPDKALKLFTDKKW-ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
+G+ +A+ F ++ P+ T VL A G L GR +H +LG + +
Sbjct: 95 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVF 151
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACAS 442
V +L+ MY++ AR +F+ +D+ +WN++ISGL N + +
Sbjct: 152 VAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGN--------------A 197
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
A+ V + K ++ V + ++ YAK G SA VF+ + K+ ++W+
Sbjct: 198 AQALDVLDEMRLEGIKMNFVTV-VSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVISWNT 256
Query: 503 MIGGYGMQGDGGGSLALFSDMLN-EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
+I GY G ++ ++ M +E+ PN+ + +IL A +H G + +G K R
Sbjct: 257 LITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIH---GRV 313
Query: 562 FKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
K + +V C++D+ + GRL +A+ +P E V+ + A + G++ +
Sbjct: 314 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT-WNAIISCHGIHGHAEKT 372
Query: 620 EVMIKKMLE--LHPDKACYYVLVS----NLYASDGRWIRVNQVRELMKQRGLS---KSPG 670
+ +ML+ + PD + L+S + + +G+W LM++ G+ K G
Sbjct: 373 LKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW-----CFRLMQEYGIKPSLKHYG 427
Query: 671 CSLVDL 676
C +VDL
Sbjct: 428 C-MVDL 432
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 182/600 (30%), Positives = 302/600 (50%), Gaps = 92/600 (15%)
Query: 167 KVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+ H I+K G D ++ L+ Y+ + + D V S++S+I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAK 95
Query: 226 CAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ + +F+RM G + + L +L CA+L A GK +H G+++++ +
Sbjct: 96 LFSQSIGVFSRMFSHGLIPDTHV-LPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQ 154
Query: 285 TALLDMYVKCGNIRDARSVFDELCSID--------------------------------- 311
+L MY++CG + DAR VFD + D
Sbjct: 155 GSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIE 214
Query: 312 --LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW ++ G+ +SGY +A+ +F F P+ VT++SVL + NLNMGR +
Sbjct: 215 PNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQI 274
Query: 370 HSLGIRLGL-EDYTVINALVDMYAKC-HV------------------------------I 397
H I+ GL +D VI+A++DMY K HV +
Sbjct: 275 HGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLV 334
Query: 398 ADARYIF----ETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSV 436
A +F E E +V++W SII+G N V P+ VT+ S+
Sbjct: 335 DKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSM 394
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ AC ++ A+ G S H ++ + LL +V+VG+AL++ YAKCG + +++VF+ M KN
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLD-DVHVGSALIDMYAKCGRIKMSQIVFNMMPTKN 453
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V W++++ GY M G +++F ++ ++P+ + FT++LSAC G+ EGWK F
Sbjct: 454 LVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFN 513
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
M ++ P ++HY CMV+LL RAG+L+EA + ++ +P EPD ++GA L+ C L +
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNV 573
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
DL E+ +K+ L P+ YVL+SN+YA+ G W V+ +R M+ GL K+PGCS + +
Sbjct: 574 DLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 241/536 (44%), Gaps = 93/536 (17%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA ++ G ND + KL++ Y ++ A + S+P+P YSF +I L+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLF 97
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTG 185
+ + M D V + K C EL G ++HC + V G D+FV
Sbjct: 98 SQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHC-VACVSGLDMDAFVQGS 156
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L MY +C +G +R+VFD +K+VV+ ++++ GY + C +E + + + M + +E N
Sbjct: 157 LFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPN 216
Query: 246 -----------------------------------QITLGSLVTACAKLRALHQGKWLHG 270
Q+T+ S++ + L+ G+ +HG
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHG 276
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE-------LCS-------------- 309
Y++K G+ + +++A+LDMY K G++ +FDE +C+
Sbjct: 277 YVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDK 336
Query: 310 --------------IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+++VSWT++I G Q+G +AL+LF + + A PN VTI S+L
Sbjct: 337 ALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLP 396
Query: 356 ASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A + L GR H +R+ L+D V +AL+DMYAKC I ++ +F K+++
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVC 456
Query: 415 WNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
WNS+++G + + PD ++ S++SAC +G G +
Sbjct: 457 WNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMS 516
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
++ + + + ++N + G Q A ++ + E ++ W A++ +Q +
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNN 572
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 46 SLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFD 104
++PS+ L G + G ++ H + L +D + L+ MY G +K ++ VF+
Sbjct: 390 TIPSM--LPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFN 447
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC-MRKRLKEHDNFVFSKVLKACCELRDID 163
MP + + ++ Y ++ K+++ ++ MR RLK D F+ +L AC ++ D
Sbjct: 448 MMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKP-DFISFTSLLSACGQVGLTD 506
Query: 164 EGMK 167
EG K
Sbjct: 507 EGWK 510
>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/453 (37%), Positives = 267/453 (58%), Gaps = 24/453 (5%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
+V AC L GK +H +LK+G E + + +L+ MY + G + DAR +FD++ + D
Sbjct: 3 VVKACGDLL---DGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
SW AMI GY Q+G +AL + + + + +T+ASVL AQ+G++ G+++H
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 372 LGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----- 425
I+ GLE + V NAL++MYAK + A+ +F KDV++WN++I+G N
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASE 178
Query: 426 -------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
+ P+ T VS++ A + +GA+Q G +H K L S+V+VGT L
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKN-CLYSDVFVGTCL 237
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
++ Y KCG A +F + KN+V W+AMI YG+ GDG +L LF +M E V+P+
Sbjct: 238 IDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDH 297
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
+ F ++LSACSH+G+V + CF M ++ PS+KHY CMVDL RAG LE A F++
Sbjct: 298 ITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIK 357
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
MPI+PD S +GA L+ C ++ +LG+ +++ E+ + YYVL+SN+YA+ G+W
Sbjct: 358 KMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEG 417
Query: 653 VNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
V+ VR L + RGL K+PG S + L+ D ++
Sbjct: 418 VDDVRSLARDRGLRKNPGWSSIILNNKVDVFYT 450
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 201/383 (52%), Gaps = 27/383 (7%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
V+KAC +L D G K+HC ++K+G D FV LV MY++ +G +R++FD+ ++
Sbjct: 3 VVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
SW +MI+GY QN A E L + + MR V+ + IT+ S++ CA++ + GK +H
Sbjct: 60 RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
Y++K G+E + AL++MY K G++ A+ VF L D+VSW +I GY Q+G +
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIK-DVVSWNTLITGYAQNGLASE 178
Query: 331 ALKLF-TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALV 388
A++++ ++ + PN T S+L A + +G L G +H I+ L D V L+
Sbjct: 179 AIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLI 238
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNVSPDAV 431
DMY KC + DA +F K+ + WN++IS L+ + V PD +
Sbjct: 239 DMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHI 298
Query: 432 TLVSVISACASLGAVQVGS-SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
T VS++SAC+ G V + + G+ S + G +++ + + G+ + A
Sbjct: 299 TFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYG-CMVDLFGRAGELEMAFNFIK 357
Query: 491 AMR-EKNTVTWSAMIGGYGMQGD 512
M + + W A++ + G+
Sbjct: 358 KMPIQPDASAWGALLNACRIHGN 380
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 139/459 (30%), Positives = 216/459 (47%), Gaps = 37/459 (8%)
Query: 60 KSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
K+ G L K H L++ G D LV MY FG V AR +FD MP D S+
Sbjct: 5 KACGDLLDGKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWN 64
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
MI Y N + ++ MR + D + VL C ++ DI G +H ++K
Sbjct: 65 AMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKH 124
Query: 176 GGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
G + FV L++MYAK +G +++VF L K+VVSW ++I GY QN A E + ++
Sbjct: 125 GLEFELFVSNALINMYAKFGSLGHAQKVFG-LLIKDVVSWNTLITGYAQNGLASEAIEVY 183
Query: 235 NRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
M E + NQ T S++ A + + AL QG +HG ++K + + + T L+DMY K
Sbjct: 184 LLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGK 243
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CG + DA S+F ++ + V W AMI Y G +KAL+LF + K P+H+T S+
Sbjct: 244 CGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSL 303
Query: 354 LSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS 408
LSA + G ++ + M GI+ L+ Y +VD++ + + A +
Sbjct: 304 LSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHY---GCMVDLFGRAGELEMAFNFIKKMP 360
Query: 409 EKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ PDA ++++AC G +++G HA + S NV
Sbjct: 361 -----------------IQPDASAWGALLNACRIHGNIELGK--HASERLFEVDSENVGY 401
Query: 469 GTALLNFYAKCGDAQSARMVFDAMRE---KNTVTWSAMI 504
L N YA G + V R+ + WS++I
Sbjct: 402 YVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSII 440
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/611 (30%), Positives = 318/611 (52%), Gaps = 21/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY G V A+ VF+ + D +++ MI Y Y + + M++
Sbjct: 46 LIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPT 105
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +L AC + +GM++H +I++ G D FV T L++MY KC + + F
Sbjct: 106 KVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFK 165
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++VVSWT+MIA VQ+D L+ RM+ V N+ITL ++ A L +
Sbjct: 166 RLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSE 225
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK+++ + +E + ++ + ++M+ G + DAR +F+++ D+V+W +I Y Q
Sbjct: 226 GKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQ 285
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+ +A++LF + N +T +L+ L +L G+++H L G + D V
Sbjct: 286 NENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVV 345
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
AL+ +Y +C A IF KDVI W + N
Sbjct: 346 ATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGR 405
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
P + TLV+V+ CA L A+Q G +H++ + G V V TAL+N Y KCG AR
Sbjct: 406 RPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMV-VETALINMYGKCGKMAEAR 464
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ M +++ + W++M+G Y G +L LF+ M + + + V F ++LSA SH+G
Sbjct: 465 SVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSG 524
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP-IEPDVSLFGA 605
V +G++ F +M +DF P+ + Y C+VDLL RAGR++EA++ + + PD L+
Sbjct: 525 SVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMT 584
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C +++ D + +++LE P + YV++SN+YA+ G W VN++R+LM+ RG+
Sbjct: 585 LLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGV 644
Query: 666 SKSPGCSLVDL 676
K PG S +++
Sbjct: 645 KKEPGRSSIEI 655
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 143/520 (27%), Positives = 249/520 (47%), Gaps = 23/520 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVF 203
D F +L+ C +++D G +VH + G + ++ G L+ MYA+C + ++QVF
Sbjct: 4 DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ K+V +WT MI Y Q L +F +M+E V ++T +++ ACA +L
Sbjct: 64 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G +HG IL+ G E + + TAL++MY KCG++R A F L D+VSWTAMI
Sbjct: 124 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 183
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL-GIRLGLEDYT 382
Q A L+ + PN +T+ +V +A L+ G+ ++SL R+ D
Sbjct: 184 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVR 243
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
V+N+ ++M+ ++ DAR +FE ++DV+ WN +I+ D
Sbjct: 244 VMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDG 303
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ + +T V +++ SL ++ G +H + G +V V TAL++ Y +C A
Sbjct: 304 IKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAG-YDRDVVVATALMSLYGRCEAPGQA 362
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+F M K+ +TW+ M Y G +L LF +M E +P +L C+H
Sbjct: 363 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 422
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
+ +G + +S + F M ++++ + G++ EA E M + D+ ++ +
Sbjct: 423 AALQKG-RQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA-KRDILVWNS 480
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYA 645
L + +D + +M +L +KA VS L A
Sbjct: 481 MLGAYAQHGYYDETLQLFNQM-QLDGEKADAVSFVSVLSA 519
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 215/446 (48%), Gaps = 30/446 (6%)
Query: 34 QHELDQTFASFHSLPS-------IPCLNLLGLCKSTGSLK---AFHALLIVDGLTNDK-C 82
Q + D+ F+ + + + +L C ST SLK H ++ G D
Sbjct: 84 QGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFV 143
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T L++MY G V+ A F + + D S+ MI +D + Y+ M+
Sbjct: 144 GTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGV 203
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIV-KVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ V A + + EG ++ + +V D V+ ++M+ +G +R+
Sbjct: 204 VPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARR 263
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F++ +D++VV+W +I YVQN+ E + LF R+++ ++ N IT ++ L +
Sbjct: 264 LFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTS 323
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +GK +H + + G + + + TAL+ +Y +C A +F ++ S D+++WT M V
Sbjct: 324 LAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVA 383
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Y Q+G+ +AL+LF + + P T+ +VL A L L GR +HS I G +
Sbjct: 384 YAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRME 443
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD----------------- 423
V AL++MY KC +A+AR +FE +++D++ WNS++
Sbjct: 444 MVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQL 503
Query: 424 DNVSPDAVTLVSVISACASLGAVQVG 449
D DAV+ VSV+SA + G+V G
Sbjct: 504 DGEKADAVSFVSVLSALSHSGSVTDG 529
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 9/230 (3%)
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD V+++ C+S V G +H + +G +N+ G L+ YA+CG A+
Sbjct: 3 PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGH-LIQMYAQCGSVPEAQQ 61
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF+ + K+ W+ MIG Y QGD +L +F M E+V P +V + IL+AC+ T
Sbjct: 62 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
+ +G + + + F + ++++ + G + A + + + DV + A +
Sbjct: 122 LKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMI 179
Query: 608 HGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVSNL----YASDGRWI 651
C + +F L + ++M + P+K Y + + Y S+G++I
Sbjct: 180 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFI 229
>gi|297823227|ref|XP_002879496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325335|gb|EFH55755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 617
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 191/555 (34%), Positives = 299/555 (53%), Gaps = 40/555 (7%)
Query: 147 FVFSKVLKACC---ELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVF 203
F+F +LK C +LR+I M +H V P+ F++ V++ D + +
Sbjct: 37 FLF--LLKKCISVNQLREIQAQMLLHS----VEKPN-FLIPKAVEL----GDFNYASFLL 85
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEG-LVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
T + N S+ MI G EG L L+ RM+ ++ + T + AC K +
Sbjct: 86 SVTEEPNHYSFNYMIRGLTNIWNDHEGALSLYRRMKYSGLKPDNFTYNFVFIACGKREEI 145
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G+ +H + K+G+E + H+ +L+ MY KCG + AR VFDE+ VSW +MI GY
Sbjct: 146 GVGRSVHSSLFKVGLERDDHISHSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGY 205
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI--RLGLED 380
+++G A+ LF + F P+ T+ S+L A A LG+L GR++ + I ++GL
Sbjct: 206 SEAGRAKDAMDLFRKMEEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLST 265
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
+ + + L+ MY KC + AR +F +KD +AWN++I+ N
Sbjct: 266 F-LGSKLITMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSSEAFKLFFEMEK 324
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
VSPDA TL +V+SAC S+GA+++G + ++++ L N+YV T L++ Y KCG +
Sbjct: 325 TGVSPDAGTLSTVLSACGSVGALELGKRIETHASEISL-QHNIYVATGLVDMYGKCGHIE 383
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A VF+AM KN TW+AMI Y QG +L LF M V P++V F +LSAC
Sbjct: 384 EALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDQM---PVPPSDVTFIGVLSACV 440
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G+V +G + F+ M F VP ++HY ++DLL+RAG L+EA EFME P +PD +
Sbjct: 441 HAGLVDQGCRYFHEMSSLFGLVPKIEHYTNIIDLLSRAGLLDEAWEFMERFPGKPDEIML 500
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
A L C + E ++ ++E+ K A YV+ S + A W ++R LM+
Sbjct: 501 AAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSKVLADMKMWDESAKMRALMRD 560
Query: 663 RGLSKSPGCSLVDLD 677
RG+ K+PGCS ++++
Sbjct: 561 RGVVKTPGCSWIEIN 575
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 218/430 (50%), Gaps = 25/430 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
L LL C S L+ A +++ + +K N L+ G YA + P+ Y
Sbjct: 38 LFLLKKCISVNQLREIQAQMLLHSV--EKPNF-LIPKAVELGDFNYASFLLSVTEEPNHY 94
Query: 113 SFQVMIRWYFLNDLYKD---IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
SF MIR L +++ D + Y+ M+ + DNF ++ V AC + +I G VH
Sbjct: 95 SFNYMIRG--LTNIWNDHEGALSLYRRMKYSGLKPDNFTYNFVFIACGKREEIGVGRSVH 152
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ KVG D + L+ MYAKC +G +R+VFDE D+ VSW SMI+GY + A+
Sbjct: 153 SSLFKVGLERDDHISHSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGYSEAGRAK 212
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ + LF +M E E ++ TL S++ ACA L L G+ L + I +++ L + L+
Sbjct: 213 DAMDLFRKMEEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLSTFLGSKLI 272
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
MY KCG++ AR VF+++ D V+W AMI Y+Q+G +A KLF + + P+
Sbjct: 273 TMYGKCGDLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAG 332
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
T+++VLSA +G L +G+ + + + L+ + V LVDMY KC I +A +FE
Sbjct: 333 TLSTVLSACGSVGALELGKRIETHASEISLQHNIYVATGLVDMYGKCGHIEEALRVFEAM 392
Query: 408 SEKDVIAWNSIISGLDDN--------------VSPDAVTLVSVISACASLGAVQVGSS-L 452
K+ WN++I+ V P VT + V+SAC G V G
Sbjct: 393 PVKNEATWNAMITAYAHQGHAKEALLLFDQMPVPPSDVTFIGVLSACVHAGLVDQGCRYF 452
Query: 453 HAYSTKQGLL 462
H S+ GL+
Sbjct: 453 HEMSSLFGLV 462
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 183/600 (30%), Positives = 305/600 (50%), Gaps = 92/600 (15%)
Query: 167 KVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+ H I+K G D ++ L+ Y+ + V D + S++S+I +
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 226 CAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ + +F+RM G + + + L +L CA+L A GK +H G+++++ +
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHV-LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 285 TALLDMYVKCGNIRDARSVFDEL-------CSI--------------------------- 310
++ MY++CG + DAR VFD + CS
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 311 -DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
++VSW ++ G+ +SGY +A+ +F F P+ VT++SVL + LNMGR++
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 370 HSLGIRLGL-EDYTVINALVDMYAKC-HV------------------------------I 397
H I+ GL +D VI+A++DMY K HV +
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 398 ADARYIFE----TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSV 436
A +FE T E +V++W SII+G N V P+ VT+ S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ AC ++ A+ G S H ++ + LL NV+VG+AL++ YAKCG +++VF+ M KN
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
V W++++ G+ M G +++F ++ ++P+ + FT++LSAC G+ EGWK F
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
M ++ P ++HY CMV+LL RAG+L+EA + ++ MP EPD ++GA L+ C L +
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
DL E+ +K+ L P+ YVL+SN+YA+ G W V+ +R M+ GL K+PGCS + +
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 240/536 (44%), Gaps = 93/536 (17%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA ++ G ND + KL++ Y ++ A V S+P+P YSF +I L+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTG 185
+ + M D+ V + K C EL G ++HC + V G D+FV
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC-VSCVSGLDMDAFVQGS 156
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
+ MY +C +G +R+VFD DK+VV+ ++++ Y + C +E + + + M +E N
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 246 -----------------------------------QITLGSLVTACAKLRALHQGKWLHG 270
Q+T+ S++ + L+ G+ +HG
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHG 276
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE-------LCS-------------- 309
Y++K G+ + +++A++DMY K G++ S+F++ +C+
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDK 336
Query: 310 --------------IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+++VSWT++I G Q+G +AL+LF + + A PNHVTI S+L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A + L GR H +R+ L D V +AL+DMYAKC I ++ +F K+++
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 415 WNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
WNS+++G + + PD ++ S++SAC +G G +
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
++ + + + ++N + G Q A + M E ++ W A++ +Q +
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 129/293 (44%), Gaps = 39/293 (13%)
Query: 66 KAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFD-------------------- 104
+ H +I GL DKC + ++ MYG GHV S+F+
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 105 -----SMPNPDFYSFQVM----IRWYFL------NDLYKDIVEFYKCMRKRLKEHDNFVF 149
++ + + Q M + W + N + +E ++ M+ + ++
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLD 208
+L AC + + G H V+V D+ V + L+DMYAKC I S+ VF+
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPT 451
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KW 267
KN+V W S++ G+ + A+E + +F + ++ + I+ SL++AC ++ +G K+
Sbjct: 452 KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMI 319
+ GI+ + ++++ + G +++A + E+ D W A++
Sbjct: 512 FKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 46 SLPSIPCLNLLGLCKSTGSLKAFHALLI-VDGLTNDKCNTKLVSMYGSFGHVKYARSVFD 104
++PS+ L G + G ++ H + V L N + L+ MY G + ++ VF+
Sbjct: 390 TIPSM--LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFN 447
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC-MRKRLKEHDNFVFSKVLKACCELRDID 163
MP + + ++ + ++ K+++ ++ MR RLK D F+ +L AC ++ D
Sbjct: 448 MMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP-DFISFTSLLSACGQVGLTD 506
Query: 164 EGMK 167
EG K
Sbjct: 507 EGWK 510
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 188/611 (30%), Positives = 300/611 (49%), Gaps = 46/611 (7%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+++Y G + A VF MP+ D +F +I + + +E ++ M+ D
Sbjct: 184 LITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPD 243
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
S +L AC L D+ +G ++H + K G +++ G L+D+Y KC D+ ++ +F+
Sbjct: 244 CVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFN 303
Query: 205 ETLDKNVVSWTSMIAGYVQ-NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
NVV W ++ + Q ND A+ LF +M+ + NQ T ++ C +
Sbjct: 304 LGNRTNVVLWNLILVAFGQINDLAK-SFELFCQMQTAGIRPNQFTYPCILRTCTCTGEID 362
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +H +K G E + ++ L+DMY K G + AR V + L D+VSWT+MI GY
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q Y AL F + + +P+++ +AS +S A + + G +H+ G D +
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVS 482
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
+ NALV++YA+C I +A FE KD I WN ++SG
Sbjct: 483 IWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSG 542
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V + T VS +SA A+L ++ G +HA K G S VG AL++ Y KCG + A
Sbjct: 543 VKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGH-SFETEVGNALISLYGKCGSFEDA 601
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+M F M E+N V+W+ +I G G +L F M
Sbjct: 602 KMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKK-------------------- 641
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
EG F SM + P HY C++D+ RAG+L+ A +F+E MPI D ++
Sbjct: 642 ----EGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRT 697
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++ ++GE+ K +LEL P + YVL+SN YA G+W +QVR++M+ RG+
Sbjct: 698 LLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGV 757
Query: 666 SKSPGCSLVDL 676
K PG S +++
Sbjct: 758 RKEPGRSWIEV 768
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 233/457 (50%), Gaps = 21/457 (4%)
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H + + G G D V L+D+Y+K + +R+VF+E ++ VSW +M++GY QN
Sbjct: 63 EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+E L L+ +M V L S++++C K QG+ +H K G + +
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
AL+ +Y++CG+ R A VF ++ D V++ +I G+ Q + + AL++F + + + P
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIF 404
+ VTI+S+L+A A LG+L G +HS + G+ DY + +L+D+Y KC + A IF
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 405 ETTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQ 447
+ +V+ WN I+ + P+ T ++ C G +
Sbjct: 303 NLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEID 362
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
+G +H+ S K G S++YV L++ Y+K G + AR V + ++EK+ V+W++MI GY
Sbjct: 363 LGEQIHSLSVKTG-FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGY 421
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
+LA F +M + P+ + + +S C+ + +G + ++ +
Sbjct: 422 VQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQ-IHARVYVSGYSGD 480
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
+ + +V+L AR GR+ EA E + + +++ G
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNG 517
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 204/375 (54%), Gaps = 10/375 (2%)
Query: 54 NLLGLCKSTGSLKA---FHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFD--SMP 107
+LL C S G L+ H+ L G+++D L+ +Y G V+ A +F+ +
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRT 308
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
N ++ +++ + +NDL K E + M+ + F + +L+ C +ID G +
Sbjct: 309 NVVLWNL-ILVAFGQINDLAKSF-ELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQ 366
Query: 168 VHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H VK G ++G L+DMY+K + +R+V + +K+VVSWTSMIAGYVQ++
Sbjct: 367 IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEY 426
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
++ L F M++ + + I L S ++ CA ++A+ QG +H + G + + A
Sbjct: 427 CKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNA 486
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+++Y +CG IR+A S F+E+ D ++W ++ G+ QSG ++ALK+F + N
Sbjct: 487 LVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHN 546
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
T S LSASA L + G+ +H+ I+ G + V NAL+ +Y KC DA+ F
Sbjct: 547 VFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFS 606
Query: 406 TTSEKDVIAWNSIIS 420
SE++ ++WN+II+
Sbjct: 607 EMSERNEVSWNTIIT 621
>gi|57899090|dbj|BAD86909.1| putative PPR986-12 [Oryza sativa Japonica Group]
Length = 560
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 284/496 (57%), Gaps = 21/496 (4%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R +FDE +++VV+WT+M++GY N +E L +F RM N+ TL S++TAC
Sbjct: 22 ARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVLTACRG 81
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN-IRDARSVFDELCS-IDLVSWT 316
A LH ++ G++ ++V AL+D Y + DAR +FD L S SWT
Sbjct: 82 PCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGRTAASWT 141
Query: 317 AMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+MI GY + G L+LF K + +IA L A + +L +G+ +H I
Sbjct: 142 SMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIA--LHACTLVIDLCLGQQLHLQCI 199
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------ 421
+ L+ + V+N+L+DMY C I DAR +F+ T E+++I WN++I+G
Sbjct: 200 KKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCDPLMALQL 259
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L+ N P+ TL S+ SACA L A++ G +H ++ S ++ +G AL++ Y+KCG
Sbjct: 260 LLEMNDEPNCFTLTSITSACADLAALRCGKQVHGAVLRRSY-SDDLQMGNALVDMYSKCG 318
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+A+ VFD M K+ +W++MI GYGM G G ++ LFS M++ V P+ V+F +++S
Sbjct: 319 SITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLIS 378
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
+CSH G+V EGW F SM ++ P+ + Y +V+LLARAGRL EAL+ ++ MP PD
Sbjct: 379 SCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDE 438
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++GA L +++ ++G + +K+ E++PD Y++++++YA+ +W R +
Sbjct: 439 YVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIMLASIYAAGSKWGEYAFTRRSL 498
Query: 661 KQRGLSKSPGCSLVDL 676
+ G K G S +++
Sbjct: 499 RGIGSRKEAGISWIEV 514
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/492 (30%), Positives = 234/492 (47%), Gaps = 28/492 (5%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
+ K T L+S S G V +AR++FD MP D ++ M+ Y N L ++ ++ ++ M
Sbjct: 2 SQKHATTLISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMV 61
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLTGLVDMYAKCRD-I 196
+ + S VL AC M +H V+ G +V+ L+D YA + +
Sbjct: 62 AAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGV 121
Query: 197 GSSRQVFDET-LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+R++FD + SWTSMIAGY + + GL LF M + VE + + A
Sbjct: 122 VDARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHA 181
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C + L G+ LH +K +++N +V +L+DMY C I DARS+FD +L++W
Sbjct: 182 CTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITW 241
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI GY+Q P AL+L + + PN T+ S+ SA A L L G+ VH +R
Sbjct: 242 NTMIAGYSQCD-PLMALQLLLEM---NDEPNCFTLTSITSACADLAALRCGKQVHGAVLR 297
Query: 376 LGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
+D + NALVDMY+KC I +A+ +F+ KD +W S+I+G N
Sbjct: 298 RSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQL 357
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
V PD V +S+IS+C+ G V G + + L N V +++N A
Sbjct: 358 FSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLA 417
Query: 478 KCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQG--DGGGSLALFSDMLNEEVQPNEVI 534
+ G + A + D M + W A++G M + G A +N + N ++
Sbjct: 418 RAGRLREALDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIM 477
Query: 535 FTTILSACSHTG 546
+I +A S G
Sbjct: 478 LASIYAAGSKWG 489
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 176/381 (46%), Gaps = 29/381 (7%)
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
T L+ G + AR++FDE+ D+V+WTAM+ GY +G +AL +F A
Sbjct: 6 ATTLISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGA 65
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAK-CHVIADAR 401
PN T++SVL+A M +H++ +R G++ V+NAL+D YA + DAR
Sbjct: 66 APNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDAR 125
Query: 402 YIFETT-SEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASL 443
+F+ S + +W S+I+G L D V + AC +
Sbjct: 126 RLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLV 185
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
+ +G LH K+ L N+ V +L++ Y C AR +FD E+N +TW+ M
Sbjct: 186 IDLCLGQQLHLQCIKKA-LDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTM 244
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I GY Q D +L L +M +E PN T+I SAC+ + G + ++ R
Sbjct: 245 IAGYS-QCDPLMALQLLLEMNDE---PNCFTLTSITSACADLAALRCGKQVHGAVLRR-S 299
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+ ++ +VD+ ++ G + A + M + S + + + G G+ + +
Sbjct: 300 YSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFS-WTSMIAGYGMNGYGNEAVQLF 358
Query: 624 KKMLE--LHPDKACYYVLVSN 642
M+ +HPD + L+S+
Sbjct: 359 SSMIHAGVHPDHVVFLSLISS 379
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/582 (30%), Positives = 307/582 (52%), Gaps = 56/582 (9%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ ++++ C + G ++H +V PD+F+ + L+ Y+K I + VF +
Sbjct: 6 YGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIP 65
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM---REGFVEGNQITLGSLVTACAKLRALHQ 264
KN+ SW ++ Y ++ + L LF+ + V+ ++ T+ + A A L +
Sbjct: 66 RKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFSNSG 125
Query: 265 -GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
K +H +IL+ G+E + +V AL+ Y +C + AR +FD + D VSW AM+ GY+
Sbjct: 126 LAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYS 185
Query: 324 QSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
Q G ++ +LF + PN +T SVL A AQ +L G VH ++ D
Sbjct: 186 QGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDV 245
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIA--------------------------- 414
++ NA++ +YAKC ++ AR +FE EKD I
Sbjct: 246 SLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERP 305
Query: 415 ----WNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLH 453
WN++ISGL N P+ VTL S++ + ++ G +H
Sbjct: 306 RLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIH 365
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
Y+ + N+YV TA+++ YAKCG A++VFD ++ ++ + W+++I Y + GD
Sbjct: 366 GYAIRN-TYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDA 424
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+L+LF +ML +QP++V FT++L+AC+H+G + E WK F + ++ P ++HY C
Sbjct: 425 NVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLVEHYAC 484
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
MV +L+RAG+L +A+EF+ MP+EP ++GA L+G + +LG+ + ++ E+ P+
Sbjct: 485 MVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFEIEPEN 544
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
YV+++NLY+ GRW + +R+LMK+ L K PG S ++
Sbjct: 545 TGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWIE 586
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 151/580 (26%), Positives = 264/580 (45%), Gaps = 96/580 (16%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA L++ + D +KL+S Y G ++ A +VF +P + +S+ + Y L+
Sbjct: 23 KQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLH 82
Query: 125 DLYKDIVEFYKCMRKRLK---EHDNFVFSKVLKACCELRDIDEGM--KVHCEIVKVGGP- 178
+++ D+++ + + + D F + LKA L + G+ +VH I++ G
Sbjct: 83 NMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLFS-NSGLAKEVHSFILRRGLEY 141
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D FV+ L+ Y++C ++ +R +FD +++ VSW +M+AGY Q +E LF M
Sbjct: 142 DIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELFRVML 201
Query: 239 EGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
V+ N +T S++ ACA+ L G +H ++ + I+++ L A++ +Y KCG +
Sbjct: 202 SSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQIKMDVSLWNAVIGLYAKCGIL 261
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK------W----------- 340
AR +F+E+ D +++ +MI GY G+ ++A+ LF +++ W
Sbjct: 262 DYARELFEEMPEKDGITYCSMISGYMVHGFVNQAMDLFREQERPRLPTWNAVISGLVQNN 321
Query: 341 -----ADFF---------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
D F PN VT+AS+L + L G+ +H IR + + V
Sbjct: 322 RQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGGKEIHGYAIRNTYDRNIYVAT 381
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSP 428
A++D YAKC + A+ +F+ + +IAW SIIS L + + P
Sbjct: 382 AIIDSYAKCGYLHGAQLVFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQP 441
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D VT SV++ACA G + A+ LL Y L+ YA
Sbjct: 442 DQVTFTSVLAACAHSGELD-----EAWKIFNVLLPE--YGIQPLVEHYA----------- 483
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
M+G G ++ S M ++P ++ +L+ S G V
Sbjct: 484 -------------CMVGVLSRAGKLSDAVEFISKM---PLEPTAKVWGALLNGASVAGDV 527
Query: 549 GEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEEA 587
G Y R F+ P + +YV M +L +++GR ++A
Sbjct: 528 ELGK---YVFDRLFEIEPENTGNYVIMANLYSQSGRWKDA 564
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 157/320 (49%), Gaps = 28/320 (8%)
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N G L+ C GK LH ++ + ++ L + L+ Y K G+IRDA +VF
Sbjct: 2 NYSAYGRLIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVF 61
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFT---DKKWADFFPNHVTIASVLSASAQL- 360
++ ++ SW A+ + YT LKLF+ + D P+ T+ L A A L
Sbjct: 62 GKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNSNSTDVKPDRFTVTCSLKALASLF 121
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
N + + VHS +R GLE D V+NAL+ Y++C + AR +F+ E+D ++WN+++
Sbjct: 122 SNSGLAKEVHSFILRRGLEYDIFVVNALITFYSRCDELVLARIMFDRMPERDTVSWNAML 181
Query: 420 SGLDD------------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+G V P+A+T VSV+ ACA + G +H + +
Sbjct: 182 AGYSQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRF-VNESQ 240
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
+ +V + A++ YAKCG AR +F+ M EK+ +T+ +MI GY + G ++
Sbjct: 241 IKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQAM---- 296
Query: 522 DMLNEEVQPNEVIFTTILSA 541
D+ E+ +P + ++S
Sbjct: 297 DLFREQERPRLPTWNAVISG 316
>gi|125525521|gb|EAY73635.1| hypothetical protein OsI_01524 [Oryza sativa Indica Group]
Length = 560
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 172/496 (34%), Positives = 284/496 (57%), Gaps = 21/496 (4%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R +FDE +++VV+WT+M++GY N +E L +F RM N+ TL S++TAC
Sbjct: 22 ARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVLTACRG 81
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN-IRDARSVFDELCS-IDLVSWT 316
A LH ++ G++ ++V AL+D Y + DAR +FD L S SWT
Sbjct: 82 PCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGRTAASWT 141
Query: 317 AMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+MI GY + G L+LF K + +IA L A + +L +G+ +H I
Sbjct: 142 SMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIA--LHACTLVIDLCLGQQLHLQCI 199
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------ 421
+ L+ + V+N+L+DMY C I DAR +F+ T E+++I WN++I+G
Sbjct: 200 KKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCDPLMALQL 259
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L+ N P+ TL S+ SACA L A++ G +H ++ S ++ +G AL++ Y+KCG
Sbjct: 260 LLEMNDEPNCFTLTSITSACADLAALRCGKQVHGAVLRRSY-SDDLQMGNALVDMYSKCG 318
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+A+ VFD M K+ +W++MI GYGM G G ++ LFS M++ V P+ V+F +++S
Sbjct: 319 SITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLIS 378
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
+CSH G+V EGW F SM ++ P+ + Y +V+LLARAGRL EAL+ ++ MP PD
Sbjct: 379 SCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDE 438
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++GA L +++ ++G + +K+ E++PD Y++++++YA+ +W R +
Sbjct: 439 YVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIMLASIYAAGSKWGEYAFTRRSL 498
Query: 661 KQRGLSKSPGCSLVDL 676
+ G K G S +++
Sbjct: 499 RGIGSRKEAGISWIEV 514
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 148/492 (30%), Positives = 233/492 (47%), Gaps = 28/492 (5%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
+ K T +S S G V +AR++FD MP D ++ M+ Y N L ++ ++ ++ M
Sbjct: 2 SQKHATTFISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMV 61
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD-SFVLTGLVDMYAKCRD-I 196
+ + S VL AC M +H V+ G +V+ L+D YA + +
Sbjct: 62 AAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGV 121
Query: 197 GSSRQVFDET-LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
+R++FD + SWTSMIAGY + + GL LF M + VE + + A
Sbjct: 122 VDARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHA 181
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C + L G+ LH +K +++N +V +L+DMY C I DARS+FD +L++W
Sbjct: 182 CTLVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITW 241
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI GY+Q P AL+L + + PN T+ S+ SA A L L G+ VH +R
Sbjct: 242 NTMIAGYSQCD-PLMALQLLLEM---NDEPNCFTLTSITSACADLAALRCGKQVHGAVLR 297
Query: 376 LGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
+D + NALVDMY+KC I +A+ +F+ KD +W S+I+G N
Sbjct: 298 RSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQL 357
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
V PD V +S+IS+C+ G V G + + L N V +++N A
Sbjct: 358 FSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLA 417
Query: 478 KCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQG--DGGGSLALFSDMLNEEVQPNEVI 534
+ G + A + D M + W A++G M + G A +N + N ++
Sbjct: 418 RAGRLREALDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIM 477
Query: 535 FTTILSACSHTG 546
+I +A S G
Sbjct: 478 LASIYAAGSKWG 489
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 29/370 (7%)
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G + AR++FDE+ D+V+WTAM+ GY +G +AL +F A PN T++SVL
Sbjct: 17 GAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVL 76
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAK-CHVIADARYIFETT-SEKD 411
+A M +H++ +R G++ V+NAL+D YA + DAR +F+ S +
Sbjct: 77 TACRGPCAPAMAMPLHAVAVRRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGRT 136
Query: 412 VIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
+W S+I+G L D V + AC + + +G LH
Sbjct: 137 AASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLHL 196
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
K+ L N+ V +L++ Y C AR +FD E+N +TW+ MI GY Q D
Sbjct: 197 QCIKKA-LDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYS-QCDPL 254
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
+L L +M +E PN T+I SAC+ + G + ++ R + ++ +
Sbjct: 255 MALQLLLEMNDE---PNCFTLTSITSACADLAALRCGKQVHGAVLRR-SYSDDLQMGNAL 310
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPD 632
VD+ ++ G + A + M + S + + + G G+ + + M+ +HPD
Sbjct: 311 VDMYSKCGSITNAKNVFDRMGCKDKFS-WTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPD 369
Query: 633 KACYYVLVSN 642
+ L+S+
Sbjct: 370 HVVFLSLISS 379
>gi|224063136|ref|XP_002301008.1| predicted protein [Populus trichocarpa]
gi|222842734|gb|EEE80281.1| predicted protein [Populus trichocarpa]
Length = 691
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 204/682 (29%), Positives = 338/682 (49%), Gaps = 68/682 (9%)
Query: 57 GLCKSTGSLKAFHALLIVDGLTND---KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
G K+ K+FH+ LI G +++ CN LVSMY F + A +FD MP + +
Sbjct: 14 GRVKALKQGKSFHSHLIKTGYSHNVYIACN--LVSMYADFTFLIDAYKLFDEMPVKNIVT 71
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN-FVFSKVLKACCELRDIDEGMKVHCEI 172
+ M+ Y N ++ ++ Y M E N F++S VLKAC + +I+ G +H
Sbjct: 72 WTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHKRF 131
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET-LDKNVVSWTSMIAGYVQNDCAQEG 230
+ D +L L+DMY KC + +R+VFD L N SW +MI+GY + +E
Sbjct: 132 SRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVEEA 191
Query: 231 LVLFNRM-------------------------------REGFVEGNQITLGSLVTACAKL 259
+ LFN+M REG ++ ++ T + C+
Sbjct: 192 VNLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREG-IKLDKFTFPCALKTCSYA 250
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE-------LCSIDL 312
L GK +H Y+LK G+E + V+AL+DMY C + DA +FD+ +C L
Sbjct: 251 GFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICD-SL 309
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
V W +M+ GY A+ + + + T++S L L N+ +G VH+L
Sbjct: 310 VLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHAL 369
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD------- 424
+ G E DY V + LVD+YAK + DA +F +KD++AW+ ++ G
Sbjct: 370 IVTSGHELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELNSLA 429
Query: 425 ----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
V D + +V+ C+SL ++ G +HA+ K+G + V + TAL++
Sbjct: 430 LSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTGKQVHAFCIKRGYETEQVTI-TALID 488
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
Y+KCG+ + ++F + +++ V W+ +I G G +L +F M+ ++PNEV
Sbjct: 489 MYSKCGEVEDGLVLFGCVADRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNEVT 548
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ +L+AC H G+V E F +M D + P ++HY CMVDLL +AG +E + + M
Sbjct: 549 YLGVLTACRHAGLVVEAQTIFGTMKCDHRLEPQLEHYYCMVDLLCQAGYFKEVEKLIAEM 608
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
P +PD +++ + L CG + L + + +L P+ YV++SN Y + G W ++
Sbjct: 609 PFKPDKTIWSSMLGACGTHRNTGLVSTIAENLLANCPNDPSIYVMLSNAYGTLGMWDSLS 668
Query: 655 QVRELMKQRGLSKSPGCSLVDL 676
QVRE K+ G+ K+ G S +++
Sbjct: 669 QVREAAKKLGV-KAAGTSWIEI 689
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/543 (25%), Positives = 245/543 (45%), Gaps = 62/543 (11%)
Query: 153 LKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
++ C ++ + +G H ++K G + ++ LV MYA + + ++FDE KN+
Sbjct: 10 IRHCGRVKALKQGKSFHSHLIKTGYSHNVYIACNLVSMYADFTFLIDAYKLFDEMPVKNI 69
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE-GNQITLGSLVTACAKLRALHQGKWLHG 270
V+WT+M++ Y N +E + L+ RM + E N ++ AC + + G+ +H
Sbjct: 70 VTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKACGLVGEIELGRLIHK 129
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGYTQSGYPD 329
+ ++ + L+ ALLDMYVKCG + DAR VFD + + SW MI GY + G +
Sbjct: 130 RFSRENLDYDIVLLNALLDMYVKCGCLSDARKVFDRIFLRANSTSWNTMISGYFKEGLVE 189
Query: 330 KALKLFTDK------KWADFFP------------------------NHVTIASVLSASAQ 359
+A+ LF W + T L +
Sbjct: 190 EAVNLFNQMPDRNVVSWNTIIAGLAENGSSRALQFVCKMHREGIKLDKFTFPCALKTCSY 249
Query: 360 LGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSE------KDV 412
G L G+ +H ++ GLE ++ALVDMY+ C+ + DA +F+ S +
Sbjct: 250 AGFLVAGKQIHCYVLKSGLESSCFAVSALVDMYSNCNGLDDAIRLFDQYSGGTGSICDSL 309
Query: 413 IAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+ WNS++SG S D+ TL S + C +L V++G +HA
Sbjct: 310 VLWNSMLSGYVVHEKNRAAVNMIAQIHHSGASVDSYTLSSALKVCINLLNVRLGIQVHAL 369
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
G + VG+ L++ YAK G+ + A +F + +K+ V WS ++ G
Sbjct: 370 IVTSG-HELDYVVGSILVDLYAKLGNMKDAFKLFHRLPKKDIVAWSGLLMGCAKMELNSL 428
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
+L+LF DM+ V+ ++ I + +L CS +G G K ++ C + ++
Sbjct: 429 ALSLFRDMVTFGVEVDQYIVSNVLKVCSSLASIGTG-KQVHAFCIKRGYETEQVTITALI 487
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDK 633
D+ ++ G +E+ L + + DV + + GC R + + ++M++ L P++
Sbjct: 488 DMYSKCGEVEDGLVLFGCVA-DRDVVCWTGIIVGCAQNGRANEALEIFRQMVQSGLKPNE 546
Query: 634 ACY 636
Y
Sbjct: 547 VTY 549
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 5/123 (4%)
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D +V+ I C + A++ G S H++ K G S NVY+ L++ YA A +
Sbjct: 2 DLKHIVAAIRHCGRVKALKQGKSFHSHLIKTGY-SHNVYIACNLVSMYADFTFLIDAYKL 60
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQ-PNEVIFTTILSACSHTGM 547
FD M KN VTW+ M+ Y G ++ L++ ML+ + + PN +++ +L AC G+
Sbjct: 61 FDEMPVKNIVTWTTMVSAYTSNGKPREAIKLYTRMLDSKSEVPNGFMYSVVLKAC---GL 117
Query: 548 VGE 550
VGE
Sbjct: 118 VGE 120
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 177/506 (34%), Positives = 270/506 (53%), Gaps = 21/506 (4%)
Query: 189 MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT 248
MY+K S+R V T +NVVSWTS+I+G QN LV F MR V N T
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
A A LR GK +H +K G ++ + + DMY K DAR +FDE+
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
+L +W A I G P +A++ F + + D PN +T + L+A + +LN+G
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180
Query: 369 VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS 427
+H L +R G + D +V N L+D Y KC I + IF K+ ++W S+++ N
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240
Query: 428 PDAVTLV-----------------SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
+ +++ SV+SACA + +++G S+HA++ K + ++VG+
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK-ACVERTIFVGS 299
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV-- 528
AL++ Y KCG + + FD M EKN VT +++IGGY QG +LALF +M
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
PN + F ++LSACS G V G K F SM + P +HY C+VD+L RAG +E A
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF++ MPI+P +S++GA + C ++ + LG + + + +L P + +VL+SN +A+ G
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAG 479
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLV 674
RW N VRE +K G+ K G S +
Sbjct: 480 RWAEANTVREELKGVGIKKGAGYSWI 505
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 205/446 (45%), Gaps = 24/446 (5%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD-IVEFYKCMRKRLKEHDNF 147
MY H + AR V P + S+ +I N + +VEF++ MR+ ++F
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE-MRREGVVPNDF 59
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F KA LR G ++H VK G D FV DMY K R +R++FDE
Sbjct: 60 TFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEI 119
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++N+ +W + I+ V + +E + F R N IT + + AC+ L+ G
Sbjct: 120 PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGM 179
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
LHG +L+ G + + + L+D Y KC IR + +F E+ + + VSW +++ Y Q+
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-N 385
+KA L+ + + I+SVLSA A + L +GR +H+ ++ +E + +
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------------V 426
ALVDMY KC I D+ F+ EK+++ NS+I G
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+P+ +T VS++SAC+ GAV+ G + + + +++ + G + A
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419
Query: 487 MVFDAMREKNTVT-WSAMIGGYGMQG 511
M + T++ W A+ M G
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHG 445
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 139/322 (43%), Gaps = 15/322 (4%)
Query: 68 FHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
H L++ G D CN L+ YG ++ + +F M + S+ ++ Y N
Sbjct: 181 LHGLVLRSGFDTDVSVCNG-LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLT 184
+ Y RK + E +F+ S VL AC + ++ G +H VK + FV +
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFV 242
LVDMY KC I S Q FDE +KN+V+ S+I GY L LF M R
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359
Query: 243 EGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
N +T SL++AC++ A+ G K GIE + + ++DM + G + A
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 419
Query: 302 SVFDELCSIDLVS-WTAMIVGYTQSGYPDKALKLFTDKKWADFFP----NHVTIASVLSA 356
++ +S W A+ G P L L + P NHV +++ +A
Sbjct: 420 EFIKKMPIQPTISVWGALQNACRMHGKPQ--LGLLAAENLFKLDPKDSGNHVLLSNTFAA 477
Query: 357 SAQLGNLNMGR-MVHSLGIRLG 377
+ + N R + +GI+ G
Sbjct: 478 AGRWAEANTVREELKGVGIKKG 499
>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
Length = 1740
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 280/492 (56%), Gaps = 16/492 (3%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ YA C + S+R +FDE KNVV + MI YV N + L++F M ++ +
Sbjct: 1066 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 1125
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T ++ A + L G +H ++++G+++N + L+ MY KCG + +A V D
Sbjct: 1126 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 1185
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
Z+ D+VSW +++ G ++G D AL++ + + P+ T+AS+L A L+
Sbjct: 1186 ZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTC-LDN 1244
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
V + ++L + N ++ +Y + A+A IF + D
Sbjct: 1245 VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF--------------LQMEDHA 1290
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V PDA+++ SV+ AC L A+ +G +H Y ++ L N+ + AL++ YAKCG + A
Sbjct: 1291 VDPDAISIASVLPACGDLSALLLGRRIHEYVVRK-RLQPNLLLENALIDMYAKCGCLEYA 1349
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R VFD M+ ++ V+W++MI YGM G G +++LFS M + + P+ + F ++LSACSH
Sbjct: 1350 REVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHA 1409
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G++ EG F M + K VP ++H+VCMVDLL RAG+++EA F++ MP+EP+ ++GA
Sbjct: 1410 GLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGA 1469
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C +YS +G + ++ +L P+++ YYVL+SN+YA GRW V VR +MK +G+
Sbjct: 1470 LLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGI 1529
Query: 666 SKSPGCSLVDLD 677
K PG S +LD
Sbjct: 1530 KKMPGVSNFELD 1541
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 142/558 (25%), Positives = 240/558 (43%), Gaps = 94/558 (16%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDG--LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
C +L LK H+ + +D +N KL+ Y G R +FD +P
Sbjct: 1030 CGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKK 1089
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ F VMIR Y N LY D + +K M + D++ + VLKA D+ GM++H
Sbjct: 1090 NVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIH 1149
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+V+VG + FV GL+ MY KC + + +V DZ ++VVSW S++AG +N
Sbjct: 1150 AAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFD 1209
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L + M ++ + T+ SL+ A + L
Sbjct: 1210 DALEVCKEMELLGLKPDAGTMASLLPA---------------------------VTNTCL 1242
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
D N+ + +F +L + LVSW MI Y + P +A+ +F + P+ +
Sbjct: 1243 D------NVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAI 1296
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETT 407
+IASVL A L L +GR +H +R L+ ++ NAL+DMYAKC + AR +F+
Sbjct: 1297 SIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQM 1356
Query: 408 SEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGS 450
+DV++W S+IS D ++PD++ VSV+SAC+ G + G
Sbjct: 1357 KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGR 1416
Query: 451 SLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQ 510
T++ + + +++ + G A M
Sbjct: 1417 YYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQM------------------ 1458
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-HTGMVGEGWKCFYSMCRDFKFVPSMK 569
++PNE ++ +LSAC ++ M+ + + F+ P
Sbjct: 1459 ----------------PMEPNERVWGALLSACRVYSNMI----IGLLAADQLFQLCPEQS 1498
Query: 570 -HYVCMVDLLARAGRLEE 586
+YV + ++ A+AGR E+
Sbjct: 1499 GYYVLLSNIYAKAGRWED 1516
>gi|302756099|ref|XP_002961473.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
gi|300170132|gb|EFJ36733.1| hypothetical protein SELMODRAFT_77426 [Selaginella moellendorffii]
Length = 643
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 192/599 (32%), Positives = 304/599 (50%), Gaps = 27/599 (4%)
Query: 75 DGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEF 133
DG D+ LV YG G V+ AR VFD + + +S+ +M+ Y N ++ +
Sbjct: 41 DGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQRRNIFSWTIMLGAYADNGHGREALGL 100
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAK 192
++ ++ R DN LKAC D++EG +H +G + V T LV MY K
Sbjct: 101 FREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGIHASARSLGYESEIIVATALVSMYGK 160
Query: 193 CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
C + ++ VF +++N VSW +M+A Y QN +E + L+ M ++ + T S+
Sbjct: 161 CGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSV 220
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDL 312
+ K H G +H +L+ G N+ L AL+ MY G + DAR VFD + +
Sbjct: 221 LDGW-KGEGEH-GTRIHDQVLESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTV 278
Query: 313 VSWTAMIVGYTQSGYPDKALKLF---TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
VSW AM+ Y Q+G KA+ LF + + A PN VT ++L A A G L GR +
Sbjct: 279 VSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKI 338
Query: 370 HSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD----- 423
H+ LGL +V AL++MY++C + A+ +F++ K++++WN +I
Sbjct: 339 HAEVASLGLLSTLSVGGALINMYSECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDG 398
Query: 424 ------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+ + PD T +SV+ AC++ A+ G ++HA GL + +GTA
Sbjct: 399 KEALGVHQKMELEGLKPDKFTFISVLHACSASEALAEGKAIHALIAASGL-ERDEAIGTA 457
Query: 472 LLNFYAKCGDAQSARMVF-DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
L+N Y KCG + AR VF D +N VTW++M+ +G + + M E + P
Sbjct: 458 LINLYGKCGSLEQARNVFLDMKSRRNLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMP 517
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
+E+ F ++L ACSH G + +G F S D+ + KHYVC+VD+L R GRLEEA E
Sbjct: 518 DELTFLSVLFACSHGGSIQQGLDLFLSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEV 577
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
+ MP + + + L C ++ F+ G ++EL P A Y L+S +++ GR
Sbjct: 578 LNRMPFQANDVAWMTLLGACRIHRDFEQGRRAADYVIELDPQNAAPYALLSTMFSVAGR 636
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 146/480 (30%), Positives = 247/480 (51%), Gaps = 26/480 (5%)
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ +L+ C RD+ + EI + G G D ++ LV Y KC + +R+VFD
Sbjct: 16 ASILRDCASARDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRIQR 75
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+N+ SWT M+ Y N +E L LF ++ + + +TL S + ACA L +G+ +
Sbjct: 76 RNIFSWTIMLGAYADNGHGREALGLFREIQSRGMAIDNVTLVSALKACAVAGDLEEGRGI 135
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H +G E + TAL+ MY KCG++ +A++VF L + VSW AM+ Y Q+G+
Sbjct: 136 HASARSLGYESEIIVATALVSMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHC 195
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINAL 387
++A++L+ + P+ T SVL G G +H + G + T+ NAL
Sbjct: 196 EEAVRLYRLMCFEGIKPDATTFVSVL--DGWKGEGEHGTRIHDQVLESGFGSNTTLANAL 253
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------------VS 427
V MY + DARY+F+ +EK V++WN++++ N V
Sbjct: 254 VSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTAYAQNGRYGKAVDLFWKMDEMRRALVE 313
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P++VT V+++ ACA+ G ++ G +HA GLLS+ + VG AL+N Y++CG+ A+
Sbjct: 314 PNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLST-LSVGGALINMYSECGNLVLAKS 372
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VFD++ KN V+W+ +IG Y GDG +L + M E ++P++ F ++L ACS +
Sbjct: 373 VFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHACSASEA 432
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
+ EG K +++ +++L + G LE+A +M ++ + + L
Sbjct: 433 LAEG-KAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRRNLVTWNSML 491
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 143/292 (48%), Gaps = 8/292 (2%)
Query: 36 ELDQTFASFHSLPSIPCLNLLGLCKSTGSLKA---FHALLIVDGLTND-KCNTKLVSMYG 91
++D+ + S+ +NLL C +TG L+A HA + GL + L++MY
Sbjct: 303 KMDEMRRALVEPNSVTFVNLLVACAATGFLEAGRKIHAEVASLGLLSTLSVGGALINMYS 362
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
G++ A+SVFDS+P+ + S+ V+I Y + K+ + ++ M + D F F
Sbjct: 363 ECGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFIS 422
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF-DETLDK 209
VL AC + EG +H I G D + T L+++Y KC + +R VF D +
Sbjct: 423 VLHACSASEALAEGKAIHALIAASGLERDEAIGTALINLYGKCGSLEQARNVFLDMKSRR 482
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
N+V+W SM+A ++ + + + M + +++T S++ AC+ ++ QG L
Sbjct: 483 NLVTWNSMLAAACTKGGLEDCVEIIHMMGLEGIMPDELTFLSVLFACSHGGSIQQGLDLF 542
Query: 270 -GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMI 319
+ GI N+ ++D+ + G + +A+ V + + + V+W ++
Sbjct: 543 LSAGVDYGIATNTKHYVCVVDILGRVGRLEEAQEVLNRMPFQANDVAWMTLL 594
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 185/568 (32%), Positives = 296/568 (52%), Gaps = 33/568 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
+ + +L+A I G ++H ++K+G G D+ + L+DMYAKC ++ + +VF
Sbjct: 6 MIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGM 65
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQG 265
++NVVSWT+++ G++++ A+E L L MR V N+ TL + + AC + + G
Sbjct: 66 PERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAG 125
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
W+HG ++ G E + + +L+ +Y K G I DAR VFD +LV+W AMI GY +
Sbjct: 126 VWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHA 185
Query: 326 GYPDKALKLFTD-----KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
G+ +L +F + ++ D P+ T AS+L A LG G VH+ + G+
Sbjct: 186 GHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVST 245
Query: 380 --DYTVINALVDMYAKCH-VIADARYIFETTSEKDVIAWNSIISG--------------- 421
+ + AL+DMY KC ++ A +F +K+ I W ++I G
Sbjct: 246 ASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFG 305
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ--GLLSSNVYVGTALLNFYA 477
V D L SV+ A V+ G +H Y+ K GL +V V +L++ Y
Sbjct: 306 RFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGL---DVSVANSLIDMYH 362
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG A F + +N V+W+AMI G G G G ++ +F +M E V+P+EV +
Sbjct: 363 KCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLA 422
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+LSACSH+G+V E + F ++ D + P +HY CMVDLL RAG L EA + + MP+
Sbjct: 423 LLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMA 482
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
P V ++ L C ++ +G + +L + D YV++SN++A G W +VR
Sbjct: 483 PTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVR 542
Query: 658 ELMKQRGLSKSPGCSLVDLDIANDFSFS 685
M++RGL K GCS V++ F +
Sbjct: 543 GAMRRRGLRKQGGCSWVEVGKEAHFFYG 570
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/410 (29%), Positives = 201/410 (49%), Gaps = 31/410 (7%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H L+ G +D L+ MY G ++ A VF MP + S+ ++ + +
Sbjct: 26 LHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERNVVSWTALMVGFLRHGD 85
Query: 127 YKDIVEFYKCMRKRLKEHDN-FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG 185
++ + MR N F S LKAC + D+ G+ +H V+ G V+
Sbjct: 86 ARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVAN 145
Query: 186 -LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE- 243
LV +Y+K IG +R+VFD T+ +N+V+W +MI+GY ++ L++F M++ E
Sbjct: 146 SLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEE 205
Query: 244 ----GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI--NSHLVTALLDMYVKCGNI 297
++ T SL+ AC L A +G +H ++ G+ N+ L ALLDMYVKC +
Sbjct: 206 EDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCL 265
Query: 298 RD-ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
A VF+ L + + WT +IVG+ Q G +A++LF + + ++SV+
Sbjct: 266 LPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGV 325
Query: 357 SAQLGNLNMGRMVHSLGIRL--GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A + GR VH ++ GL D +V N+L+DMY KC + +A F ++V++
Sbjct: 326 FADFALVEQGRQVHCYTVKTPAGL-DVSVANSLIDMYHKCGLTDEAARRFREVPARNVVS 384
Query: 415 WNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQ 447
W ++I+GL + V PD V ++++SAC+ G V+
Sbjct: 385 WTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVE 434
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 196/425 (46%), Gaps = 36/425 (8%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH- 144
LV +Y G + AR VFD + ++ MI Y +D + ++ M++R +E
Sbjct: 147 LVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEE 206
Query: 145 ----DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRD-I 196
D F F+ +LKAC L EG +VH +V G ++ + L+DMY KCR +
Sbjct: 207 DHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLL 266
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ QVF+ KN + WT++I G+ Q +E + LF R V + L S+V
Sbjct: 267 PMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVF 326
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A + QG+ +H Y +K ++ + +L+DMY KCG +A F E+ + ++VSWT
Sbjct: 327 ADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWT 386
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHS 371
AMI G + G+ +A+ +F + + P+ V ++LSA + G + R + H
Sbjct: 387 AMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFSAIRHD 446
Query: 372 LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAV 431
+R E Y +VD+ + +++A KD++A + +P
Sbjct: 447 RRLRPRAEHYAC---MVDLLGRAGELSEA---------KDLVATMPM--------APTVG 486
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
+++SAC V VG A T + N L N +A+ GD + + V A
Sbjct: 487 VWQTLLSACRVHKNVTVGRE--AGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGA 544
Query: 492 MREKN 496
MR +
Sbjct: 545 MRRRG 549
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 189/608 (31%), Positives = 309/608 (50%), Gaps = 28/608 (4%)
Query: 92 SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSK 151
S G + +A ++FD M + D ++ MI Y + E YK M+ D + F
Sbjct: 48 SSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGS 107
Query: 152 VLKA-CCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDK 209
+LK C R +D G +VH IVK+G + + + L+DMYAKC + + VF +
Sbjct: 108 ILKGVACACR-LDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRR 166
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
N VSW ++IAG+V L M E V + T L+T + + LH
Sbjct: 167 NSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLH 226
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD-ELCSIDLVSWTAMIVGYTQSGYP 328
I+K G++ ++ + A + Y +CG++ DA VFD + S DLV+W +M+ +
Sbjct: 227 CKIIKHGVQFDNTVCNATITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRK 286
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NAL 387
+ A KLF D + F P+ T +++SA + N G+ +H L I+ GLE I NA+
Sbjct: 287 ETAFKLFLDMQQFGFEPDIYTYTTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAV 343
Query: 388 VDMY--AKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSP 428
+ MY + + + DA +F + KD ++WNSI++G V
Sbjct: 344 IAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDI 403
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D +V+ +C+ L +Q+G +H + K G SN +V ++L+ Y+KCG + AR
Sbjct: 404 DHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGF-ESNDFVASSLIFMYSKCGMIEDARKS 462
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F+ + +++TW++++ Y G G +L LF M +++V+ + + F L+ACSH G+V
Sbjct: 463 FEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLV 522
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
+G SM D+ P M+HY C VDL RAG L+EA +E+MP +PD ++ L
Sbjct: 523 EQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLG 582
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C +L + +LEL P++ C YV++SN+Y RW + LM++R + K
Sbjct: 583 ACRACGDIELAAQVASHLLELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKV 642
Query: 669 PGCSLVDL 676
PG S +++
Sbjct: 643 PGWSWIEV 650
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 244/496 (49%), Gaps = 29/496 (5%)
Query: 69 HALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H+L++ G + L+ MY V+ A VF +P + S+ +I + L +
Sbjct: 125 HSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDH 184
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGL 186
+CM + D+ FS +L E + M++HC+I+K G D+ V
Sbjct: 185 DTAFWLLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNAT 244
Query: 187 VDMYAKCRDIGSSRQVFDETL-DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
+ Y++C + + +VFD + +++V+W SM+A ++ +D + LF M++ E +
Sbjct: 245 ITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPD 304
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK--CGNIRDARSV 303
T ++++AC+ GK LHG ++K G+E + A++ MY++ ++ DA +V
Sbjct: 305 IYTYTTIISACSHKD---NGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNV 361
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F + S D VSW +++ G++Q+G+ + ALKLF ++A +H ++VL + + L L
Sbjct: 362 FHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATL 421
Query: 364 NMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
+G+ +H L ++ G E V ++L+ MY+KC +I DAR FE T++ I WNSI+
Sbjct: 422 QLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAY 481
Query: 423 -----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSN 465
D V D +T V+ ++AC+ +G V+ G L +S
Sbjct: 482 AQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPR 541
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ ++ + + G A+ + ++M + + + W ++G GD + + S +L
Sbjct: 542 MEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLL 601
Query: 525 NEEVQPNEVIFTTILS 540
E++P E ILS
Sbjct: 602 --ELEPEEHCTYVILS 615
>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 700
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 192/615 (31%), Positives = 310/615 (50%), Gaps = 23/615 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR--KR 140
N+ L S+ + G+++ AR VFD MP+ D S+ +I+ Y + + + + MR
Sbjct: 38 NSHLRSLINA-GNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRVVDP 96
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSS 199
D V S VLKAC + +I G +H VK S FV + L+DMY + I S
Sbjct: 97 AVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKS 156
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
+VF E +N V+WT++I G V +EGL F+ M + T + ACA L
Sbjct: 157 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALKACAGL 216
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
R + GK +H +++ G + + +L MY +CG +RD +F+ + D+VSWT++I
Sbjct: 217 RQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVSWTSLI 276
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
V Y + G+ +KA++ F + + PN T A++ SA A L L G +H LGL
Sbjct: 277 VAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVFSLGLN 336
Query: 380 D-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-------------- 424
D +V N+++ MY+ C + A +F+ +D+I+W++II G
Sbjct: 337 DSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWM 396
Query: 425 ---NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
P L S++S ++ ++ G +HA + GL N V + L+N Y+KCG+
Sbjct: 397 RQSGPKPTDFALASLLSVSGNMAVLEGGRQVHALAFCFGL-EQNSTVRSTLINMYSKCGN 455
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ A +F+ + V+ +AMI GY G ++ LF L P+ V F ++L+A
Sbjct: 456 IKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTA 515
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C+H+G + G+ F M + P+ +HY CMVDLL RAGRL EA + ++ M + D
Sbjct: 516 CTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDV 575
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ L C + G +++LEL P A V ++N+Y+S G VR+ MK
Sbjct: 576 VWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMK 635
Query: 662 QRGLSKSPGCSLVDL 676
+G+ K PG S + +
Sbjct: 636 AKGVIKEPGWSSIKI 650
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 81/202 (40%), Gaps = 14/202 (6%)
Query: 21 LRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGL-TN 79
++FS+ Q P D AS L++ G + HAL GL N
Sbjct: 390 FKYFSWMRQSGP--KPTDFALASL--------LSVSGNMAVLEGGRQVHALAFCFGLEQN 439
Query: 80 DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
+ L++MY G++K A +F+ D S MI Y + K+ ++ ++ K
Sbjct: 440 STVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 499
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIG 197
D+ F VL AC +D G + + P +VD+ + +
Sbjct: 500 VGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAKEHYGCMVDLLCRAGRLS 559
Query: 198 SSRQVFDE-TLDKNVVSWTSMI 218
+ ++ DE + K+ V WT+++
Sbjct: 560 EAEKMIDEMSWKKDDVVWTTLL 581
>gi|413938252|gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
Length = 709
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 208/665 (31%), Positives = 329/665 (49%), Gaps = 72/665 (10%)
Query: 60 KSTGSLKAFHALLIVDGLTNDK-----CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
+ T A HA L+ G + L+ Y G + A + D MP D ++
Sbjct: 37 RDTALTSALHAALLKSGALRSRQAPLAAANSLLHAYLQCGLLSRALRLLDEMPRRDAATY 96
Query: 115 QVMI----RWYFLNDLYKDIVEF--YKCMRKR----LKEHDNFVFSKVLKACCELRDIDE 164
+I R D + ++ + C + + + F + V++AC RD
Sbjct: 97 APLISAHCRLGAPLDALRAFLDMLAWGCSDEEGVDDVVRPNEFTAAAVVQACGLARDERL 156
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
VH +V G D FVL LV+MYAK D+ S+R++ ++VVSWT++++G V
Sbjct: 157 ARMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDVASARRLLLGLPCRDVVSWTAIVSGCVL 216
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
N +E L +F M E V N +T+ S++ ACA + A +H ++ + +E ++ +
Sbjct: 217 NAMLEEALGVFLMMLEDGVLPNNVTMLSVIQACALMGASELFGPVHALVVLLELEHDASV 276
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD--KKWA 341
V +L+ MY K +G+ ++A++LF K
Sbjct: 277 VNSLIMMYAK-------------------------------NGFVEEAIRLFKGFYLKTG 305
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADA 400
N +A+VL G++ G +H+ I++G +V N+L+ MYA+ I A
Sbjct: 306 SVCSNEDVLAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAA 365
Query: 401 RYIFETTSEKDVIAWNSIISGLDDN--------------------VSPDAVTLVSVISAC 440
+FE KD+++WN+IIS L ++PD VT++S++ AC
Sbjct: 366 LLVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQAC 425
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
++ G + G LH Y K G + +V + AL++ YAK G A M+F+ M K+ V+W
Sbjct: 426 SNAGLLHQGQMLHGYVMKSGFVY-DVSICNALISMYAKLGRIDFAEMIFERMDIKDLVSW 484
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEV-QPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
++MI YGM GDG +L +F + + PN + F +++SACSH+G+V EG KCF SM
Sbjct: 485 NSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHKCFESMG 544
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
RD PSM HY C+VDLL R+GR EA +F+ +MP+ PD +++G L C L+ DL
Sbjct: 545 RDHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDMPVRPDSTIWGPLLAACQLHGNVDLA 604
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
E K++ L P+ + V +SN YAS GRW ++R M++ GL K G S VD+
Sbjct: 605 EKAAKELSALEPESDIWRVSLSNTYASVGRWRDAAKIRSEMRRVGLRKETGWSFVDVGGV 664
Query: 680 NDFSF 684
F F
Sbjct: 665 EGFKF 669
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 276/469 (58%), Gaps = 20/469 (4%)
Query: 228 QEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
++ L LF M + V +Q T+ + +C+++ L G+ + Y +K G+ + ++++
Sbjct: 100 EDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSS 159
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ MY C ++ A+ +FD + +V W A+I Y ++G + +++F +
Sbjct: 160 LIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFD 219
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFE 405
+T+ SV++A ++G+ +G+ V GL + ++ AL+DMYAKC + AR +F+
Sbjct: 220 EITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFD 279
Query: 406 TTSEKDVIAWNSIISGLDD-----------------NVSPDAVTLVSVISACASLGAVQV 448
+DV+AW+++ISG V P+ VT+VSV+SACA LGA++
Sbjct: 280 GMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALET 339
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H+Y ++ LS + +GTAL++FYAKCG A F++M KN+ TW+A+I G
Sbjct: 340 GKWVHSY-IRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMA 398
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G G +L LFS M ++P +V F +L ACSH+ +V EG + F SM +D+ P
Sbjct: 399 TNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRA 458
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY C+VDLL RAG ++EA +F+ MPIEP+ ++ A L C ++ ++GE +K+++
Sbjct: 459 EHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALKQIVS 518
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
L+P + Y+L+SN+YAS G+W +R+ MK RG+ K+PGCSL++LD
Sbjct: 519 LNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELD 567
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 236/469 (50%), Gaps = 32/469 (6%)
Query: 65 LKAFHALLIVDG-LT-NDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYS--FQVMIR 119
L HA LI G LT + KC ++ L + S + YA S+F P P + + V++R
Sbjct: 32 LPQLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMR 91
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKE-HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
+D + + M D + LK+C + +D G + VK G
Sbjct: 92 ALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLM 151
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FVL+ L+ MYA CRD+ +++ +FD + VV W ++I Y++N E + +F M
Sbjct: 152 ADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGM 211
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
E V ++ITL S+VTAC ++ GKW+ Y+ + G+ N +L+TAL+DMY KCG +
Sbjct: 212 LEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGEL 271
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
AR +FD + S D+V+W+AMI GYTQ+ +AL LF++ + A+ PN VT+ SVLSA
Sbjct: 272 GKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSAC 331
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAW 415
A LG L G+ VHS IR T+I ALVD YAKC I DA FE+ K+ W
Sbjct: 332 AVLGALETGKWVHSY-IRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTW 390
Query: 416 NSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
++I G+ N + P VT + V+ AC+ V+ G H S
Sbjct: 391 TALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRR-HFDSMT 449
Query: 459 Q--GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMI 504
Q G+ + G +++ + G A M E N V W A++
Sbjct: 450 QDYGIKPRAEHYG-CVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALL 497
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 168/484 (34%), Positives = 272/484 (56%), Gaps = 29/484 (5%)
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TAL 287
GL + ++ G + + L+ C +L + QG+ +H +++ +++HLV +
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNII 129
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++MY KCG + DAR +FDE+ + D+V+WTA+I G++Q+ P AL LF F PNH
Sbjct: 130 VNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNH 189
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFET 406
T++S+L AS L+ G +H+ ++ G + + +ALVDMYA+C + A+ F+
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
K ++WN++ISG N P T SV+SACAS+GA++ G
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQG 309
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA+ K GL ++G LL+ YAK G A+ VFD + + + V+W+ M+ G
Sbjct: 310 KWVHAHMIKSGL-KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L F ML ++PNE+ F +L+ACSH+G++ EG ++ + + +K P +
Sbjct: 369 HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGL-YYFELMKKYKVEPDVP 427
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HYV VDLL R G L+ A F+ MPIEP +++GA L C ++ +LG ++ EL
Sbjct: 428 HYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFEL 487
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFS 683
P + +L+SN+YAS GRW V +VR++MK+ G+ K P CS V+++ +AND +
Sbjct: 488 DPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDET 547
Query: 684 FSRV 687
R+
Sbjct: 548 HPRI 551
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 210/389 (53%), Gaps = 26/389 (6%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQV 202
D ++SK+LK C L +++G VH +V D+ ++ +V+MYAKC + +R++
Sbjct: 86 DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRM 145
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRA 261
FDE K++V+WT++IAG+ QN+ ++ L+LF +M R GF + N TL SL+ A
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGF-QPNHFTLSSLLKASGSEHG 204
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G LH + LK G + + ++ +AL+DMY +CG++ A+ FD + + VSW A+I G
Sbjct: 205 LDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISG 264
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
+ + G + AL L + +F P H T +SVLSA A +G L G+ VH+ I+ GL+
Sbjct: 265 HARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLI 324
Query: 382 TVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LD 423
I N L+DMYAK I DA+ +F+ + DV++WN++++G L
Sbjct: 325 AFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLR 384
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYS-TKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P+ ++ + V++AC+ G + G L+ + K+ + +V ++ + G
Sbjct: 385 IGIEPNEISFLCVLTACSHSGLLDEG--LYYFELMKKYKVEPDVPHYVTFVDLLGRVGLL 442
Query: 483 QSA-RMVFDAMREKNTVTWSAMIGGYGMQ 510
A R + + E W A++G M
Sbjct: 443 DRAERFIREMPIEPTAAVWGALLGACRMH 471
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 173/337 (51%), Gaps = 3/337 (0%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V+MY G + AR +FD MP D ++ +I + N+ +D + + M + + +
Sbjct: 129 IVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPN 188
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFD 204
+F S +LKA +D G ++H +K G S +V + LVDMYA+C + +++ FD
Sbjct: 189 HFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFD 248
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
K+ VSW ++I+G+ + + L L +M+ + T S+++ACA + AL Q
Sbjct: 249 GMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQ 308
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GKW+H +++K G+++ + + LLDMY K G+I DA+ VFD L D+VSW M+ G Q
Sbjct: 309 GKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
G + L F PN ++ VL+A + G L+ G L + +E D
Sbjct: 369 HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPH 428
Query: 384 INALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSII 419
VD+ + ++ A R+I E E W +++
Sbjct: 429 YVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
>gi|356518523|ref|XP_003527928.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g08210-like [Glycine max]
Length = 686
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 193/664 (29%), Positives = 333/664 (50%), Gaps = 55/664 (8%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K+ H+L+I GL+N ++S+Y AR++FD MP+ + SF M+ + +
Sbjct: 23 KSLHSLIIKLGLSNHIFLLNSIISVYAKCSRFDDARTLFDEMPHRNIVSFTTMVSAFTNS 82
Query: 125 DLYKDIVEFYKCM-RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFV 182
+ + Y M + + + F++S VLKAC + D++ GM VH + + D+ +
Sbjct: 83 GRPHEALTLYNHMLESKTVQPNQFLYSAVLKACGLVGDVELGMLVHQHVSEARLEFDTVL 142
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE-GF 241
+ L+DMY KC + +++VF E KN SW ++I G+ + ++ LF++M E
Sbjct: 143 MNALLDMYVKCGSLMDAKRVFHEIPCKNSTSWNTLILGHAKQGLMRDAFNLFDQMPEPDL 202
Query: 242 VEGNQITLG-----------------------------SLVTACAKLRALHQGKWLHGYI 272
V N I G + AC L L G+ +H I
Sbjct: 203 VSWNSIIAGLADNASPHALQFLSMMHGKGLKLDAFTFPCALKACGLLGELTMGRQIHCCI 262
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI--DLVSWTAMIVGYTQSGYPDK 330
+K G+E + + +++L+DMY C + +A +FD+ + L W +M+ GY +G +
Sbjct: 263 IKSGLECSCYCISSLIDMYSNCKLLDEAMKIFDKNSPLAESLAVWNSMLSGYVANGDWWR 322
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
AL + + + T + L NL + VH L I G E D+ V + L+D
Sbjct: 323 ALGMIACMHHSGAQFDSYTFSIALKVCIYFDNLRLASQVHGLIITRGYELDHVVGSILID 382
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVT 432
+YAK I A +FE KDV+AW+S+I G + ++ D
Sbjct: 383 LYAKQGNINSALRLFERLPNKDVVAWSSLIVGCARLGLGTLVFSLFMDMVHLDLEIDHFV 442
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
L V+ +SL ++Q G +H++ K+G S V + TAL + YAKCG+ + A +FD +
Sbjct: 443 LSIVLKVSSSLASLQSGKQIHSFCLKKGYESERV-ITTALTDMYAKCGEIEDALALFDCL 501
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
E +T++W+ +I G G ++++ M+ +PN++ +L+AC H G+V E W
Sbjct: 502 YEIDTMSWTGIIVGCAQNGRADKAISILHKMIESGTKPNKITILGVLTACRHAGLVEEAW 561
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
F S+ + P +HY CMVD+ A+AGR +EA + +MP +PD +++ + L CG
Sbjct: 562 TIFKSIETEHGLTPCPEHYNCMVDIFAKAGRFKEARNLINDMPFKPDKTIWCSLLDACGT 621
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
Y L ++ + +L P+ A Y+++SN+YAS G W +++VRE +++ G+ K G S
Sbjct: 622 YKNRHLANIVAEHLLATSPEDASVYIMLSNVYASLGMWDNLSKVREAVRKVGI-KGAGKS 680
Query: 673 LVDL 676
+++
Sbjct: 681 WIEI 684
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 290/554 (52%), Gaps = 29/554 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
+ + +L+A + G+++H ++K+G G D+ + L+DMYAKC + + +VFD
Sbjct: 6 MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++NVVSWT+++ G++ + A+E L LF MR N+ TL + + AC G
Sbjct: 66 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGV 123
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG ++ G E + + +L+ MY K DAR VFD + S +L +W +MI GY +G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183
Query: 327 YPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE---DYT 382
+L +F + ++ D P+ T AS+L A + LG G VH+ G+ +
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ AL+D+Y KCH + A +F+ ++ I W ++I G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ--GLLSSNVYVGTALLNFYAKCGDAQ 483
V D L SV++ A V+ G +H Y+ K GL +V V +L++ Y KCG
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL---DVSVANSLVDMYLKCGLTG 360
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A F M +N V+W+AMI G G G G ++ LF +M E V+ +EV + +LSACS
Sbjct: 361 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACS 420
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H+G+V E + F +C+D + P +HY CMVDLL RAG L EA E + +MP+EP V ++
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 480
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
L C ++ +G + +L + D YV++SN+ A G W +R M+++
Sbjct: 481 QTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRK 540
Query: 664 GLSKSPGCSLVDLD 677
GL K GCS ++D
Sbjct: 541 GLRKQGGCSWTEVD 554
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 218/463 (47%), Gaps = 30/463 (6%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA L+ G +D N L+ MY G + A VFD MP + S+ ++ + +
Sbjct: 26 LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 85
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLT 184
++ + + MR + F S LKAC G+++H V+ G G D V
Sbjct: 86 ARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHD-VVAN 142
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVE 243
LV MY+K R G +R+VFD +N+ +W SMI+GY ++ L++F M R +
Sbjct: 143 SLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQ 202
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI--NSHLVTALLDMYVKCGNIRDAR 301
++ T SL+ AC+ L A +G +H + G+ N+ L ALLD+YVKC + A
Sbjct: 203 PDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAM 262
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD L + + WT +IVG+ Q G +A+ LF + + ++SV++ A
Sbjct: 263 QVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFA 322
Query: 362 NLNMGRMVHSLGIRL--GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+ G+ VH + GL D +V N+LVDMY KC + +A F ++V++W ++I
Sbjct: 323 LVEQGKQVHCYTAKTPAGL-DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMI 381
Query: 420 SGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+G+ ++ V D V ++++SAC+ G V + + +
Sbjct: 382 NGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRM 441
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMI 504
+++ + G+ + A+ + +M + TV W ++
Sbjct: 442 RPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLL 484
>gi|449526313|ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 706
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 189/630 (30%), Positives = 333/630 (52%), Gaps = 9/630 (1%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
L C S L+ HA I+ G N ++KL+ Y + G + ++ VF S+ +P+
Sbjct: 33 LFSRCNSIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTL 92
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
F ++R + + Y+ M + D + VL++C ++ G +H +V
Sbjct: 93 FNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLV 152
Query: 174 KVGGPDSF--VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
K+G D F V T L +MY +C + ++ Q+FD+ K++ +S+ QND +
Sbjct: 153 KLGF-DLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIF 211
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
+F RM + + T +L+ A L ++ K +H + + + + TA+L +Y
Sbjct: 212 RVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLY 271
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
K ++ DAR +FD++ D V W MI Y + G P + L+LF + + T
Sbjct: 272 SKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTAL 331
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
V+S+ AQL ++ G+ H+ +R G + +V N+L+DMY +C ++ A IF ++K
Sbjct: 332 PVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDK 391
Query: 411 DVIAWNSIISGL-DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
+ S+ S + D + D V +++++ A +GA++ LH YS K GL +S +
Sbjct: 392 SSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGL-TSLPSLN 450
Query: 470 TALLNFYAKCGDAQSARMVFDAMR--EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
TALL YAKCG + A+ +F+ + +K+ + W++MI + GD L++ M
Sbjct: 451 TALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSN 510
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+P++V F +L+AC ++G+V +G + F M + PS +HY CMV+LL RAG + EA
Sbjct: 511 SKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEA 570
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
E ++NMPI+PD ++G L C ++ L E +K++ + P A Y+L+SN+YA+
Sbjct: 571 GELVKNMPIKPDARVWGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAA 630
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
G+W V ++R ++ +GL K PGCS ++++
Sbjct: 631 GKWDGVAKMRSFLRNKGLKKIPGCSWLEIN 660
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 24/333 (7%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TL L + C ++ L Q +H + G N L + L+D Y G + + VF +
Sbjct: 29 TLSLLFSRCNSIQHLQQ---IHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSV 85
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
+L + A++ T+ G ++ L ++ P+ T VL + + N+ GR
Sbjct: 86 IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 145
Query: 368 MVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
+H ++LG + + V+ AL +MY +C +A +F+ S KD + W S ++
Sbjct: 146 TIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKD-LGWPSSLTTEGPQN 204
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ + + PD+ T +++ A L ++Q+ +H + LS ++ V
Sbjct: 205 DNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSK-LSGDLLV 263
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
TA+L+ Y+K AR +FD M EK+ V W+ MI Y +G L LF M +
Sbjct: 264 NTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGI 323
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
+ + ++S+ + V G + + R+
Sbjct: 324 RSDLFTALPVISSIAQLKCVDWGKQTHAHILRN 356
>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Vitis vinifera]
Length = 678
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 169/492 (34%), Positives = 280/492 (56%), Gaps = 16/492 (3%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ YA C + S+R +FDE KNVV + MI YV N + L++F M ++ +
Sbjct: 77 LMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPD 136
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T ++ A + L G +H ++++G+++N + L+ MY KCG + +A V D
Sbjct: 137 HYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLD 196
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
++ D+VSW +++ G ++G D AL++ + + P+ T+AS+L A L+
Sbjct: 197 QMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTC-LDN 255
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
V + ++L + N ++ +Y + A+A IF + D
Sbjct: 256 VSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIF--------------LQMEDHA 301
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V PDA+++ SV+ AC L A+ +G +H Y ++ L N+ + AL++ YAKCG + A
Sbjct: 302 VDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRL-QPNLLLENALIDMYAKCGCLEYA 360
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R VFD M+ ++ V+W++MI YGM G G +++LFS M + + P+ + F ++LSACSH
Sbjct: 361 REVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHA 420
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G++ EG F M + K VP ++H+VCMVDLL RAG+++EA F++ MP+EP+ ++GA
Sbjct: 421 GLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGA 480
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C +YS +G + ++ +L P+++ YYVL+SN+YA GRW V VR +MK +G+
Sbjct: 481 LLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGI 540
Query: 666 SKSPGCSLVDLD 677
K PG S +LD
Sbjct: 541 KKMPGVSNFELD 552
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/464 (27%), Positives = 209/464 (45%), Gaps = 55/464 (11%)
Query: 65 LKAFHALLIVDG--LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
LK H+ + +D +N KL+ Y G R +FD +P + F VMIR Y
Sbjct: 54 LKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIPKKNVVFFNVMIRSYV 113
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N LY D + +K M + D++ + VLKA D+ GM++H +V+VG + F
Sbjct: 114 NNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVF 173
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V GL+ MY KC + + +V D+ ++VVSW S++AG +N + L + M
Sbjct: 174 VGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLG 233
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
++ + T+ SL+ A + LD N+ +
Sbjct: 234 LKPDAGTMASLLPA---------------------------VTNTCLD------NVSFVK 260
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+F +L + LVSW MI Y + P +A+ +F + P+ ++IASVL A L
Sbjct: 261 EMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLS 320
Query: 362 NLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L +GR +H +R L+ ++ NAL+DMYAKC + AR +F+ +DV++W S+IS
Sbjct: 321 ALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMIS 380
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
D ++PD++ VSV+SAC+ G + G T++ +
Sbjct: 381 AYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIV 440
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ +++ + G A M E N W A++
Sbjct: 441 PRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 484
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 303/556 (54%), Gaps = 23/556 (4%)
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSR 200
K D + +++ +++++G ++H +++ G P++F+ +++Y+KC ++ +
Sbjct: 71 KLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTI 130
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKL 259
++FD+ +N+VSWTS+I G+ N QE L F +MR EG + Q L S++ AC L
Sbjct: 131 KLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEI-ATQFALSSVLQACTSL 189
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
A+ G +H ++K G + + L DMY KCG + DA F+E+ D V WT+MI
Sbjct: 190 GAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMI 249
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
G+ ++G KAL + D F + + S LSA + L + G+ +H+ ++LG E
Sbjct: 250 DGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFE 309
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSE-KDVIAWNSIISGLDD------------- 424
T I NAL DMY+K + A +F+ S+ +++ +II G +
Sbjct: 310 YETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVD 369
Query: 425 ----NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ P+ T S+I ACA+ ++ GS LH K + +V + L++ Y KCG
Sbjct: 370 LRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNF-KRDPFVSSTLVDMYGKCG 428
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ +FD + + + W+ ++G + G G ++ F+ M++ ++PN V F +L
Sbjct: 429 LFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLK 488
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
CSH GMV +G F SM + + VP +HY C++DLL RAG+L+EA +F+ NMP EP+V
Sbjct: 489 GCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNV 548
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
+ +FL C ++ + + K+++L P+ + +VL+SN+YA + +W V +R+++
Sbjct: 549 FGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMI 608
Query: 661 KQRGLSKSPGCSLVDL 676
K ++K PG S VD+
Sbjct: 609 KDGNMNKLPGYSWVDI 624
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 145/472 (30%), Positives = 234/472 (49%), Gaps = 28/472 (5%)
Query: 66 KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA+LI G L N + +++Y G + Y +FD M + S+ +I + N
Sbjct: 95 KQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHN 154
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
+++ + + MR + F S VL+AC L I G +VHC +VK G G + FV
Sbjct: 155 SRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVG 214
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ L DMY+KC ++ + + F+E K+ V WTSMI G+V+N ++ L + +M V
Sbjct: 215 SNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVF 274
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+Q L S ++AC+ L+A GK LH ILK+G E + + AL DMY K G++ A +V
Sbjct: 275 IDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNV 334
Query: 304 FD-ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
F I +VS TA+I GY + +KAL F D + PN T S++ A A
Sbjct: 335 FQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAK 394
Query: 363 LNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS- 420
L G +H ++ + D V + LVDMY KC + + +F+ D IAWN+++
Sbjct: 395 LEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGV 454
Query: 421 ----GLDDN------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ---GL 461
GL N + P+AVT V+++ C+ G V+ G L+ +S+ + G+
Sbjct: 455 FSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDG--LNYFSSMEKIYGV 512
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ + + +++ + G + A + M E N W + +G + GD
Sbjct: 513 VPKEEHY-SCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHGD 563
>gi|255562697|ref|XP_002522354.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538432|gb|EEF40038.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 704
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 206/660 (31%), Positives = 339/660 (51%), Gaps = 33/660 (5%)
Query: 47 LPSIPCLN-LLGLCKSTGSLKA---FHALLIVDGLTNDKC-----NTKLVSMYGSFGHVK 97
+ +I CL L+ C + SLK HAL++ + N L++MY G
Sbjct: 1 MSTICCLEALIKKCTTINSLKKARQLHALILATTASTSYAQSPYLNNNLIAMYAHCGSRS 60
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDI-VEFYKCMRKRLKEHDNFVFSKVLKAC 156
A+ +FD MP + S+ +I Y + Y+ + + + M + + F+ +L+ C
Sbjct: 61 DAQKLFDRMPRKNAISYNALIAAYCRDSSYETLSFKLFSDMGIQRLRPNGATFTSLLQVC 120
Query: 157 CELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWT 215
C L D G +H ++++ G D V T L+ MY+ C D+ S+ +VF ++K+ V W
Sbjct: 121 CLLEDWFLGSTLHGQVLQFGYVNDICVQTMLLGMYSDCGDLESACKVFGYAVEKDDVFWN 180
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
SMI+GY++ND +E L LF M Q T + AC+KL QG+ +H ++
Sbjct: 181 SMISGYLKNDRIKESLSLFGEMVRSGTIFTQFTCSMALNACSKLGYYSQGRIIHAQVIVS 240
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
I +S L ALLDMY CG+ R A ++F + L+SW +MI + ++ +KA+ LF
Sbjct: 241 NILPDSALQNALLDMYYSCGDRRTALTLFSRIQIPSLISWNSMISWFAKNEEGEKAMGLF 300
Query: 336 TD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAK 393
+ P+ T +++SA+ + + G+ +H+ I+ GL+ I NAL+ MY +
Sbjct: 301 VKLLGMSTCKPDEYTFTAIISATGEFRATDYGQPLHAQVIKAGLQWSVFIGNALLSMYFR 360
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISG---LDDNVSP--------------DAVTLVSV 436
+ AR +F EKDV+ W +I G L D S D+ L
Sbjct: 361 NSDVEAARGVFSLMEEKDVVLWTEMIMGHCRLGDGESAIKLFCKMRQEGHKSDSFALSGA 420
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+S CA L ++ G LH + K G + + V +L++ YAK G+ Q+A+++F + +
Sbjct: 421 LSVCADLAILKQGQMLHTQAVKTG-CEAEISVCGSLVDMYAKNGNLQAAQLIFSQVCNPD 479
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
W++MIGGY G ++ LF+++L + P++V F ++LSAC+H+G+V +G K +
Sbjct: 480 LKCWNSMIGGYSHHGMAEEAVMLFAEVLECGLTPDQVTFLSLLSACNHSGLVEKG-KFLW 538
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM-ENMPIEPDVSLFGAFLHGCGLYSR 615
+ P KHY CMV LL+RAG L+EA E + E+ E + L+ L C
Sbjct: 539 DYMKKNGITPGPKHYSCMVSLLSRAGLLDEAEELITESTCSEEHLKLWRTLLSSCVNRRN 598
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+G K++L L P+ + Y+L+SNLYA GRW V ++R+ ++ L K PG S ++
Sbjct: 599 LTVGARAAKQVLRLDPEDSATYILLSNLYAVTGRWDGVAELRKKIRGLMLEKDPGVSWIE 658
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 195/621 (31%), Positives = 330/621 (53%), Gaps = 30/621 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ LVS + +G + A+ +F+ M + + + ++ ++ + +K M K L E
Sbjct: 289 SALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVE 347
Query: 144 HDNFVFSKVLKACCELRDIDEGMK----VHCEIVKVGGPDSFVLTG--LVDMYAKCRDIG 197
+ ++ +L A E ++ EG + VH +++ D ++L G LV++YAKC I
Sbjct: 348 INASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAID 407
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
++R +F K+ VSW S+I+G N+ +E + F+ MR + ++ ++ S +++CA
Sbjct: 408 NARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCA 467
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
L + G+ +HG +K G++++ + ALL +Y + + + + VF + D VSW +
Sbjct: 468 SLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNS 527
Query: 318 MIVGY-TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
I T +A+K F + A + PN VT ++LSA + L L +GR +H+L ++
Sbjct: 528 FIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKH 587
Query: 377 GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISG------------- 421
+ D I N L+ Y KC + D IF SE+ D ++WN++ISG
Sbjct: 588 SVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGL 647
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
+ D TL +V+SACAS+ ++ G +HA + + L + V VG+AL++ YA
Sbjct: 648 VWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIR-ACLEAEVVVGSALVDMYA 706
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG A F+ M +N +W++MI GY G GG +L LF+ M P+ V F
Sbjct: 707 KCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVG 766
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+LSACSH G+V EG++ F SM ++ P ++H+ CMVDLL RAG +++ EF++ MP+
Sbjct: 767 VLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMN 826
Query: 598 PDVSLFGAFLHGC--GLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
P+ ++ L C +LG K ++EL P A YVL+SN++A+ G+W V +
Sbjct: 827 PNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEE 886
Query: 656 VRELMKQRGLSKSPGCSLVDL 676
R M+ + K GCS V +
Sbjct: 887 ARLAMRNAEVKKEAGCSWVTM 907
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 249/511 (48%), Gaps = 47/511 (9%)
Query: 68 FHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
H + GLT+D CNT LV+++ G++ A+ +FD MP + S+ ++ Y N
Sbjct: 61 LHLQIYKTGLTSDVFWCNT-LVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQNG 119
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD--IDEGMKVHCEIVKVGGPDSFVL 183
+ + ++ + +++ L+AC EL + GM++H I K VL
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVL 179
Query: 184 TG-LVDMYAKCR-DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
+ L+ MY+ C I +R+VF+E K SW S+I+ Y + A LF+ M+
Sbjct: 180 SNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQREA 239
Query: 242 VE----GNQITLGSLVT-ACA----KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
E N+ T SLVT AC+ L L Q + I K + ++ +AL+ +
Sbjct: 240 TELNCRPNEYTFCSLVTVACSLVDCGLTLLEQ---MLARIEKSSFVKDLYVGSALVSGFA 296
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP-NHVTIA 351
+ G I A+ +F+++ + V+ ++VG + ++A K+F + K D N + A
Sbjct: 297 RYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMK--DLVEINASSYA 354
Query: 352 SVLSASAQLGNLNMGRM----VHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFE 405
+LSA + NL G+ VH+ IR L D ++ NALV++YAKC+ I +AR IF+
Sbjct: 355 VLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQ 414
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
KD ++WNSIISGLD N + P +++S +S+CASLG + +
Sbjct: 415 LMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIML 474
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H K G L +V V ALL YA+ + + VF M E + V+W++ IG
Sbjct: 475 GQQIHGEGIKCG-LDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALA 533
Query: 509 M-QGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
+ ++ F +M+ +PN V F I
Sbjct: 534 TSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 207/431 (48%), Gaps = 38/431 (8%)
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+++ ++H +I K G D F LV+++ + ++ S++++FDE KN+VSW+ +++G
Sbjct: 55 VEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSG 114
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL--RALHQGKWLHGYILKIGIE 278
Y QN E +LF + + N +GS + AC +L L G +HG I K
Sbjct: 115 YAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYA 174
Query: 279 INSHLVTALLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
+ L L+ MY C +I DAR VF+E+ SW ++I Y + G A KLF+
Sbjct: 175 SDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSS 234
Query: 338 KKWA----DFFPNHVTIASVLSASAQL---GNLNMGRMVHSLGIRLGLEDYTVINALVDM 390
+ + PN T S+++ + L G + +M+ + ++D V +ALV
Sbjct: 235 MQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSG 294
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------DDNVSPDAVTLV 434
+A+ +I A+ IFE +++ + N ++ GL D V +A +
Sbjct: 295 FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINASSYA 354
Query: 435 SVISACASLGAVQ----VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
++SA ++ G +HAY + L+ + +G AL+N YAKC +AR +F
Sbjct: 355 VLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQ 414
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV-- 548
M K+TV+W+++I G ++A F M + P++ + LS+C+ G +
Sbjct: 415 LMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIML 474
Query: 549 -----GEGWKC 554
GEG KC
Sbjct: 475 GQQIHGEGIKC 485
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 262/447 (58%), Gaps = 22/447 (4%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
+L+ C L L++GK +H +L + + LL++Y KCG++ AR +FDE+ S
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM--GRM 368
D+V+WTA+I GY+Q P AL L + PN T+AS+L A++ +G+ ++ GR
Sbjct: 80 DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139
Query: 369 VHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------ 421
+H L +R G + ++ A++DMYA+CH + +A+ IF+ K+ ++WN++I+G
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
L +NV P T SV+ ACAS+G+++ G +HA K G +VG
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGE-KLVAFVGN 258
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
LL+ YAK G + A+ VFD + +++ V+W++M+ GY G G +L F +ML + P
Sbjct: 259 TLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAP 318
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
N++ F +L+ACSH G++ EG + ++ M + + P + HYV MVDLL RAG L+ A++F
Sbjct: 319 NDITFLCVLTACSHAGLLDEG-RHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQF 377
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
+ MPI+P +++GA L C ++ +LG + + EL +VL+ N+YA GRW
Sbjct: 378 ISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRW 437
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDLD 677
+VR++MK+ G+ K P CS V+++
Sbjct: 438 NDAAKVRKMMKESGVKKEPACSWVEME 464
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 242/548 (44%), Gaps = 59/548 (10%)
Query: 52 CLNLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMP 107
C LL C L K HALL+ +D L+++Y G + YAR +FD M
Sbjct: 18 CHTLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMS 77
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL--RDIDEG 165
+ D ++ +I Y +D +D + M + + + F + +LKA + D+ +G
Sbjct: 78 SRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQG 137
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H ++ G + +V ++DMYA+C + ++ +FD + KN VSW ++IAGY +
Sbjct: 138 RQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ LF+ M V+ T S++ ACA + +L QGKW+H ++K G ++ + +
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
LLDMY K G+I DA+ VFD L D+VSW +M+ GY+Q G AL+ F +
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317
Query: 345 PNHVTIASVLSASAQLGNLNMGR----MVHSLGIRLGLEDYTVINALVDMYAKC-HVIAD 399
PN +T VL+A + G L+ GR M+ + + Y +VD+ + H+
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVT---MVDLLGRAGHLDRA 374
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I E + P A +++ AC +++G Y+ +
Sbjct: 375 IQFISEMP------------------IKPTAAVWGALLGACRMHKNMELG----GYAAEC 412
Query: 460 GLLSSNVYVGTALL--NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
+ Y GT +L N YA G A V M+E G++ + S
Sbjct: 413 IFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKES------------GVKKEPACSW 460
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
E++ +F A + W+ ++ +VP H + +D
Sbjct: 461 V--------EMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYVPDSSHVLLCMDQ 512
Query: 578 LARAGRLE 585
R +L+
Sbjct: 513 QEREAKLQ 520
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 209/665 (31%), Positives = 346/665 (52%), Gaps = 38/665 (5%)
Query: 43 SFHSLPSIPCLNL-LGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYAR 100
+F SL + C ++ GLC L+ A + G D ++ LVS + FG A+
Sbjct: 282 TFGSLITTACSSVDFGLC----VLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAK 337
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK-EHDNFVFSKVLKACCEL 159
++F+ M + S ++ + + + M+ + D++V +L A E
Sbjct: 338 NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEF 395
Query: 160 RDIDEGMK----VHCEIVKVGGPDSFVL--TGLVDMYAKCRDIGSSRQVFDETLDKNVVS 213
++EG + VH +++ G D+ V GLV+MYAK I + VF+ ++K+ VS
Sbjct: 396 SVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVS 455
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W S+I+G QN+C+++ F+RMR + TL S +++CA L + G+ +H L
Sbjct: 456 WNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL 515
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS-GYPDKAL 332
K+G++ + + ALL +Y + G + VF + D VSW ++I + S +A+
Sbjct: 516 KLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAV 575
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMY 391
K F + + VT ++LSA + L + +H+L ++ L D T I NAL+ Y
Sbjct: 576 KYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCY 635
Query: 392 AKCHVIADARYIFETTSE-KDVIAWNSIISG-----------------LDDNVSPDAVTL 433
KC + + IF SE +D ++WNS+ISG + D+ T
Sbjct: 636 GKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTF 695
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+++SACAS+ ++ G +HA + L S+V VG+AL++ Y+KCG A F+ M
Sbjct: 696 ATILSACASVATLERGMEVHACGIR-ACLESDVVVGSALVDMYSKCGRIDYASRFFELMP 754
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+N +W++MI GY G G +L LF+ M+ + P+ V F +LSACSH G V EG++
Sbjct: 755 LRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE 814
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F SM ++ P ++H+ CMVDLL RAG+L+E +F+ +MP++P+V ++ L C
Sbjct: 815 HFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRA 874
Query: 614 S--RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGC 671
+ +LG + +LEL P A YVL++N+YAS +W V + R MK+ + K GC
Sbjct: 875 NGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGC 934
Query: 672 SLVDL 676
S V +
Sbjct: 935 SWVTM 939
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 221/468 (47%), Gaps = 46/468 (9%)
Query: 128 KDIVEFYK-----CMRKRLKEHDNF--VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
+D+V+ YK C + F + ++ +CC +E ++H + +K G +
Sbjct: 50 QDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCS----EEARELHLQSIKYGFVGN 105
Query: 181 FVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-R 238
L+ L+++Y + D+GS++++FDE ++N+V+W +I+GY QN E F M R
Sbjct: 106 LFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVR 165
Query: 239 EGFVEGNQITLGSLVTACAK--LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC-G 295
GF+ N GS + AC + G +HG I K + + L+ MY C
Sbjct: 166 AGFIP-NHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLD 224
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA----DFFPNHVTIA 351
+ DARSVFD + + +SW ++I Y++ G A LF+ + F PN T
Sbjct: 225 SANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFG 284
Query: 352 SVLS---ASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS 408
S+++ +S G + +M+ + L+D V +ALV +A+ + DA+ IFE
Sbjct: 285 SLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMG 344
Query: 409 EKDVIAWNSIISGL----------------DDNVSPDAVTLVSVISACASLGAVQ----V 448
++V++ N ++ GL D V ++ + V ++SA + ++
Sbjct: 345 VRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRK 404
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +HA+ + GL + V +G L+N YAK G A VF+ M EK++V+W+++I G
Sbjct: 405 GREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLD 464
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG--MVGEGWKC 554
+ F M P+ + LS+C+ G M+GE C
Sbjct: 465 QNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHC 512
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 290/554 (52%), Gaps = 29/554 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
+ + +L+A + G+++H ++K+G G D+ + L+DMYAKC + + +VFD
Sbjct: 6 MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++NVVSWT+++ G++ + A+E L LF MR N+ TL + + AC G
Sbjct: 66 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGV 123
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG ++ G E + + +L+ MY K DAR VFD + S +L +W +MI GY +G
Sbjct: 124 QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAG 183
Query: 327 YPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE---DYT 382
+L +F + ++ D P+ T AS+L A + LG G VH+ G+ +
Sbjct: 184 QGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAI 243
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN 425
+ AL+D+Y KCH + A +F+ ++ I W ++I G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ--GLLSSNVYVGTALLNFYAKCGDAQ 483
V D L SV++ A V+ G +H Y+ K GL +V V +L++ Y KCG
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGL---DVSVANSLVDMYLKCGLTG 360
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A F M +N V+W+AMI G G G G ++ LF +M E V+ +EV + +LSACS
Sbjct: 361 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS 420
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H+G+V E + F +C+D + P +HY CMVDLL RAG L EA E + +MP+EP V ++
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 480
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
L C ++ +G + +L + D YV++SN+ A G W +R M+++
Sbjct: 481 QTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRK 540
Query: 664 GLSKSPGCSLVDLD 677
GL K GCS ++D
Sbjct: 541 GLRKQGGCSWTEVD 554
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 217/463 (46%), Gaps = 30/463 (6%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA L+ G +D N L+ MY G + A VFD MP + S+ ++ + +
Sbjct: 26 LHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERNVVSWTALMVGFLHHGE 85
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLT 184
++ + + MR + F S LKAC G+++H V+ G G D V
Sbjct: 86 ARECLRLFGEMRGSGTSPNEFTLSATLKACGG--GTRAGVQIHGVCVRTGFEGHD-VVAN 142
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVE 243
LV MY+K R G +R+VFD +N+ +W SMI+GY ++ L++F M R +
Sbjct: 143 SLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRDSLLVFREMQRRHDEQ 202
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI--NSHLVTALLDMYVKCGNIRDAR 301
++ T SL+ AC+ L A +G +H + G+ N+ L ALLD+YVKC + A
Sbjct: 203 PDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAM 262
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD L + + WT +IVG+ Q G +A+ LF + + ++SV++ A
Sbjct: 263 QVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFA 322
Query: 362 NLNMGRMVHSLGIRL--GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+ G+ VH + GL D +V N+LVDMY KC + +A F ++V++W ++I
Sbjct: 323 LVEQGKQVHCYTAKTPAGL-DVSVANSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMI 381
Query: 420 SGLD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+G+ + V D V ++++SAC+ G V + + +
Sbjct: 382 NGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSGLVDECRRYFSRICQDRRM 441
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSAMI 504
+++ + G+ + A+ + +M + TV W ++
Sbjct: 442 RPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTLL 484
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 299/582 (51%), Gaps = 55/582 (9%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETL 207
F + LK C RD+ G +H +K P S L+ + +Y+KCR + ++R+VFD T
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 208 DKNV-------------------------------VSWTSMIAGYVQNDCAQEGLVLFNR 236
D NV VS+ ++IA Y + Q LF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
MRE F++ + TL ++TAC L + LH + G++ + AL+ Y K G
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGL--IRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 297 IRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+++AR +F L D VSW +M+V Y Q KAL+L+ + + T+ASVL+
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 356 ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCH-VIADARYIFETTSEKDVI 413
A + +L G H+ I+ G ++ V + L+D+Y+KC + D R +F+ S D++
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLV 308
Query: 414 AWNSIISG------LDDNV------------SPDAVTLVSVISACASLGAVQVGSSLHAY 455
WN++ISG L D PD +LV VISAC+++ + G +H
Sbjct: 309 LWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGL 368
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
+ K + S+ + V AL+ Y+KCG+ + A+ +FD M E NTV++++MI GY G G
Sbjct: 369 ALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQ 428
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
SL LF ML + P + F ++L+AC+HTG V +G F M + F P H+ CM+
Sbjct: 429 SLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMI 488
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DLL RAG+L EA +E +P +P + A L C ++ +L ++L+L P A
Sbjct: 489 DLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAA 548
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YV+++N+Y+ +GR VR+LM+ RG+ K PGCS ++++
Sbjct: 549 PYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVN 590
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 230/454 (50%), Gaps = 32/454 (7%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S Y +V+ A +FD MP PD S+ +I Y + + + MR+ + D
Sbjct: 80 LISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMD 139
Query: 146 NFVFSKVLKACCELRDIDEGM--KVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQ 201
F S ++ AC I+ G+ ++H V V G DS+V G L+ Y+K + +R+
Sbjct: 140 GFTLSGIITAC----GINVGLIRQLHALSV-VTGLDSYVSVGNALITSYSKNGFLKEARR 194
Query: 202 VFD-ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+F + D++ VSW SM+ Y+Q+ + L L+ M + + TL S++TA ++
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQ 254
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN-IRDARSVFDELCSIDLVSWTAMI 319
L G H ++K G NSH+ + L+D+Y KCG + D R VFDE+ + DLV W MI
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMI 314
Query: 320 VGYT-QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
GY+ D+AL+ F + P+ ++ V+SA + + + + GR VH L ++L +
Sbjct: 315 SGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDI 374
Query: 379 ED--YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------------- 421
+V NAL+ MY+KC + DA+ +F+T E + +++NS+I+G
Sbjct: 375 PSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQ 434
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
L+ + +P +T +SV++ACA G V+ G ++ + + +++ +
Sbjct: 435 RMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRA 494
Query: 480 GD-AQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
G +++ R++ + WSA++G + G+
Sbjct: 495 GKLSEAERLIETIPFDPGFFXWSALLGACRIHGN 528
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L++MY G+++ A+++FD+MP + S+ MI Y + + + ++ M +
Sbjct: 382 NNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDF 441
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSS 199
N F VL AC +++G K++ ++K P++ + ++D+ + + +
Sbjct: 442 TPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEA 500
Query: 200 RQVFDE-TLDKNVVSWTSMIAG 220
++ + D W++++
Sbjct: 501 ERLIETIPFDPGFFXWSALLGA 522
>gi|224065397|ref|XP_002301797.1| predicted protein [Populus trichocarpa]
gi|222843523|gb|EEE81070.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 277/507 (54%), Gaps = 21/507 (4%)
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
YA+ I S+R +FD+ + V +W +MI Y + E L L+++M + + T
Sbjct: 50 YARIGGITSARHLFDKLPQRGVDAWNAMIVAYSRRYHLTEVLNLYHQMVNEGGKPDSSTF 109
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
+ A + L+ L G+ + + G + + +++L++YVKCG I +A+ VFD++
Sbjct: 110 TVAIKASSSLKDLEAGERIWRRAVDFGYGCDVFVGSSVLNLYVKCGKIDEAKLVFDKMVK 169
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
D+V W MI G Q+G +A+ +F + + V + ++ A A LG L +G V
Sbjct: 170 RDVVCWATMITGLVQNGNVLEAVDMFRRMRKEGIEGDGVLMLGLVQACANLGELKLGLSV 229
Query: 370 HSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-- 425
H +R + ++D + +LVDMYAK + A +FE K+ ++W ++ISG N
Sbjct: 230 HGHAVRREMLMDDVILQTSLVDMYAKIGDLELASRVFEQMPRKNAVSWGALISGFAQNGF 289
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
PD LVS + AC+ +G +++G S+H Y ++ L + +GT
Sbjct: 290 AEYALDLLVEMQSLEFKPDTAVLVSALLACSQVGHLKLGKSIHGYIVRR--LGFELVLGT 347
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
AL++ YAKCG A +FD + ++ + W+ MI YG+ GDG L+LF M + P
Sbjct: 348 ALIDMYAKCGSLSCAHAIFDRVDSRDVILWNTMIASYGIHGDGKEVLSLFLKMKEANISP 407
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
+ F ++LSA SH+G V G F +M + K PS KHY CMVDL +RAGR+EEA +
Sbjct: 408 DHATFASLLSALSHSGQVDVGQYWFNAMVNECKIPPSEKHYACMVDLFSRAGRVEEAYQL 467
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
+E+M EP ++++ A L GC Y GEV KK+L+L+PD Y LVSN ++ W
Sbjct: 468 IESMNTEPGLAIWVALLSGCHNYRNLLFGEVAAKKILDLNPDDLGIYALVSNFFSLARMW 527
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDLD 677
RV+ +R++MK+ G+ K PG S V+++
Sbjct: 528 DRVSILRKIMKETGMKKVPGYSAVEVN 554
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 141/476 (29%), Positives = 246/476 (51%), Gaps = 24/476 (5%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
+LL CK + HAL+I GL N N +++ Y G + AR +FD +P
Sbjct: 12 HLLLACKDEAPVTQIHALIITTGLFFANSNFNGLVIASYARIGGITSARHLFDKLPQRGV 71
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
++ MI Y +++ Y M + D+ F+ +KA L+D++ G ++
Sbjct: 72 DAWNAMIVAYSRRYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIWRR 131
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
V G G D FV + ++++Y KC I ++ VFD+ + ++VV W +MI G VQN E
Sbjct: 132 AVDFGYGCDVFVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEA 191
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLD 289
+ +F RMR+ +EG+ + + LV ACA L L G +HG+ ++ + ++ ++ T+L+D
Sbjct: 192 VDMFRRMRKEGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVD 251
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY K G++ A VF+++ + VSW A+I G+ Q+G+ + AL L + + +F P+
Sbjct: 252 MYAKIGDLELASRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTAV 311
Query: 350 IASVLSASAQLGNLNMGRMVHSLGI-RLGLEDYTVINALVDMYAKCHVIADARYIFETTS 408
+ S L A +Q+G+L +G+ +H + RLG E + AL+DMYAKC ++ A IF+
Sbjct: 312 LVSALLACSQVGHLKLGKSIHGYIVRRLGFE-LVLGTALIDMYAKCGSLSCAHAIFDRVD 370
Query: 409 EKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSS 451
+DVI WN++I+ + N+SPD T S++SA + G V VG
Sbjct: 371 SRDVILWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQY 430
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ + + +++ +++ G + A + ++M E W A++ G
Sbjct: 431 WFNAMVNECKIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSG 486
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 141/310 (45%), Gaps = 9/310 (2%)
Query: 53 LNLLGLCKSTGSLK---AFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMP 107
L L+ C + G LK + H + + D T LV MY G ++ A VF+ MP
Sbjct: 211 LGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYAKIGDLELASRVFEQMP 270
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ S+ +I + N + ++ M+ + D V L AC ++ + G
Sbjct: 271 RKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVLVSALLACSQVGHLKLGKS 330
Query: 168 VHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
+H IV+ G + + T L+DMYAKC + + +FD ++V+ W +MIA Y +
Sbjct: 331 IHGYIVRRLGFELVLGTALIDMYAKCGSLSCAHAIFDRVDSRDVILWNTMIASYGIHGDG 390
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK-WLHGYILKIGIEINSHLVTA 286
+E L LF +M+E + + T SL++A + + G+ W + + + I +
Sbjct: 391 KEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQYWFNAMVNECKIPPSEKHYAC 450
Query: 287 LLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
++D++ + G + +A + + + L W A++ G Y + KK D P
Sbjct: 451 MVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSGC--HNYRNLLFGEVAAKKILDLNP 508
Query: 346 NHVTIASVLS 355
+ + I +++S
Sbjct: 509 DDLGIYALVS 518
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 2/160 (1%)
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+ +HA GL +N ++ YA+ G SAR +FD + ++ W+AMI Y
Sbjct: 24 TQIHALIITTGLFFANSNFNGLVIASYARIGGITSARHLFDKLPQRGVDAWNAMIVAYSR 83
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
+ L L+ M+NE +P+ FT + A S + G + + DF + +
Sbjct: 84 RYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGER-IWRRAVDFGYGCDVF 142
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+++L + G+++EA + M ++ DV + + G
Sbjct: 143 VGSSVLNLYVKCGKIDEAKLVFDKM-VKRDVVCWATMITG 181
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 272/500 (54%), Gaps = 30/500 (6%)
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
++ +VFD+ + N W +M GY QN+ ++ +VLF +M+ V N T ++ +C
Sbjct: 3 NAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCV 62
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
K+ AL +G+ +H +++K G N + T L+DMY G I A VF E+ ++++WTA
Sbjct: 63 KINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTA 122
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNH--VTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI GY L T ++ D P V +++S + ++ R L +
Sbjct: 123 MINGYIT------CCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRAR---ELFDK 173
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------- 421
+ +D N +++ YA + +FE E++V +WN++I G
Sbjct: 174 MPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAF 233
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
+D V P+ TLV+V+SACA LGA+ +G +H Y+ G NVYV AL++ YA
Sbjct: 234 KRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGY-KGNVYVRNALMDMYA 292
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG ++A VF +M K+ ++W+ +IGG + G G +L LFS M P+ + F
Sbjct: 293 KCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIG 352
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
IL AC+H G+V +G+ F SM D+ VP ++HY C+VDLL RAG L A++F+ MPIE
Sbjct: 353 ILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIE 412
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
D ++ A L C +Y +L E+ ++K++E P YV++SN+Y GRW V +++
Sbjct: 413 ADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLK 472
Query: 658 ELMKQRGLSKSPGCSLVDLD 677
M+ G K PGCSL++++
Sbjct: 473 VAMRDTGFKKLPGCSLIEVN 492
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 213/441 (48%), Gaps = 53/441 (12%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A VFD +P P+ + M R Y N+ +KD++ ++ M+ + F F +LK+C +
Sbjct: 4 AHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVK 63
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
+ + EG +VHC ++K G + FV T L+DMYA I ++ +VF E +++NV++WT+M
Sbjct: 64 INALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAM 123
Query: 218 IAGYVQN----------DCAQE-GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
I GY+ D A E +VL+N M G++E + + K+
Sbjct: 124 INGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELF--DKMPNKDVMS 181
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
W +L+ Y G++ +F+E+ ++ SW A+I GYT++G
Sbjct: 182 W-----------------NTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNG 224
Query: 327 YPDKALKLFTDKKWAD--FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+ L F + D PN T+ +VLSA A+LG L++G+ VH G + + V
Sbjct: 225 CFSEVLSAFK-RMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYV 283
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNV 426
NAL+DMYAKC V+ A +F++ KD+I+WN+II GL
Sbjct: 284 RNALMDMYAKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGE 343
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG-DAQSA 485
+PD +T + ++ AC +G V+ G S T + + +++ + G A +
Sbjct: 344 NPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAV 403
Query: 486 RMVFDAMREKNTVTWSAMIGG 506
+ E + V W+A++G
Sbjct: 404 DFIRKMPIEADAVIWAALLGA 424
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 185/408 (45%), Gaps = 25/408 (6%)
Query: 29 QQTPTQHELDQTFASFHSLPSIP-CLNLLGLCKSTGSLKAF------HALLIVDGL-TND 80
Q + ++ F L +P C + KS + A H +I G N
Sbjct: 27 SQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKSCVKINALKEGEEVHCFVIKSGFRANP 86
Query: 81 KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
T L+ MY S G + A VF M + ++ MI Y D+V + +
Sbjct: 87 FVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMINGYIT---CCDLVTARR-LFDL 142
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSR 200
E D +++ ++ E +D+ ++ K+ D +++ YA D+ +
Sbjct: 143 APERDIVLWNTMISGYIEAKDVIRAREL---FDKMPNKDVMSWNTVLNGYASNGDVMACE 199
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKL 259
++F+E ++NV SW ++I GY +N C E L F RM +G V N TL ++++ACA+L
Sbjct: 200 RLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDGTVVPNDATLVNVLSACARL 259
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
AL GKW+H Y G + N ++ AL+DMY KCG + A VF + + DL+SW +I
Sbjct: 260 GALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFKSMDNKDLISWNTII 319
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGI 374
G G+ AL LF+ K A P+ +T +L A +G + G M I
Sbjct: 320 GGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSI 379
Query: 375 RLGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISG 421
+E Y I VD+ + ++A A +I + E D + W +++
Sbjct: 380 VPRIEHYGCI---VDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGA 424
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 152/335 (45%), Gaps = 27/335 (8%)
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ +A VFD++ + W AM GY+Q+ + LF K D PN T +L +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
++ L G VH I+ G + V L+DMYA I A +F E++VIAW
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 416 NSIISG-------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
++I+G D D V ++IS G ++ + A +
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMIS-----GYIEAKDVIRARELFDKMP 175
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ +V +LN YA GD + +F+ M E+N +W+A+IGGY G L+ F
Sbjct: 176 NKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKR 235
Query: 523 ML-NEEVQPNEVIFTTILSACSHTGMVGEG-WKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
ML + V PN+ +LSAC+ G + G W Y+ +K +++ ++D+ A+
Sbjct: 236 MLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRN--ALMDMYAK 293
Query: 581 AGRLEEALEFMENMP----IEPDVSLFGAFLHGCG 611
G +E AL+ ++M I + + G +HG G
Sbjct: 294 CGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHG 328
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 178/531 (33%), Positives = 282/531 (53%), Gaps = 50/531 (9%)
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
I +RQVFD+ + S I Y + E L F M + V T+ + +
Sbjct: 46 IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK---------------------- 293
CA L A+ GK +H +++ G + AL++ Y K
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165
Query: 294 ---------CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
G + AR +FD++ +VSW AMI Y Q+G K +F +
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE 225
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYI 403
PN +T+A+VLS A+LG+L MG + L L + V A+++MY KC + D R +
Sbjct: 226 PNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLV 285
Query: 404 FETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAV 446
F+ + +DV+ W+++I+G N + P+ VTLVSV+SACA LG+V
Sbjct: 286 FDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSV 345
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ G + +Y +GL+S NVYV +ALL Y+KCG+ AR +FD + +++ VTW++MI G
Sbjct: 346 ETGERIGSYVESRGLIS-NVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMG 404
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
+ G ++AL++ M EV+PN + F +++AC+H G V G + F SM D P
Sbjct: 405 LAINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISP 464
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
+++H+ C+VDL R+GRL +A EF+ M +EP+V ++G L ++ +L E+ KK+
Sbjct: 465 NIEHFACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKL 524
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
LEL PD + YV++SN+YAS GRW +VR+LMK + + K+ S V+++
Sbjct: 525 LELEPDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVE 575
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 173/595 (29%), Positives = 275/595 (46%), Gaps = 95/595 (15%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
++LL LK AL+I+ L+ + + + SF ++YAR VFD +P+PD
Sbjct: 6 IDLLHCSLPINQLKQIQALIIIKYLSLTPLFIRRL-LNASF--IQYARQVFDQIPHPDQG 62
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
I Y L + + + M + F + K+C L ID G +VH +
Sbjct: 63 VHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLV 122
Query: 173 VKVGGPDS-FVLTGLVDMYAKCRDIGS-------------------------------SR 200
++ G S F L++ YAK D+GS +R
Sbjct: 123 IRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAAR 182
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++FD+ D+++VSW +MI+ Y QN +G ++F RM++ E N+ITL ++++ CAKL
Sbjct: 183 ELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLG 242
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L G + + N + TA+L+MYVKCG + D R VFD + D+V+W+AMI
Sbjct: 243 DLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIA 302
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-E 379
GY Q+G ++AL+LF + K A PN VT+ SVLSA AQLG++ G + S GL
Sbjct: 303 GYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLIS 362
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------- 425
+ V +AL+ MY+KC I AR IF+ ++D + WNS+I GL N
Sbjct: 363 NVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMK 422
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
V P+ +T V +++AC G V++G +S N+ +++ + + G
Sbjct: 423 EIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSG-- 480
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+I Y + EV+PN VI+ T+LSA
Sbjct: 481 -------------------RLIDAYEF-------------ICRMEVEPNVVIWGTLLSAS 508
Query: 543 S---HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ + K + D + +YV + ++ A AGR +EAL+ + M
Sbjct: 509 RIHLNVELAELAGKKLLELEPD-----NSGNYVILSNIYASAGRWQEALKVRKLM 558
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 200/388 (51%), Gaps = 17/388 (4%)
Query: 44 FHSLPSIPCLN-LLGLCKSTGSLKAFHALLIVDG-LTNDKCNTK-LVSMYGSFGHVKYAR 100
FHS S+ C N L+ L + A LI DG L D L+S Y G V AR
Sbjct: 127 FHS--SVFCQNALINFYAKINDLGS--AELIFDGILVKDTIAYNCLISAYSRSGEVLAAR 182
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR 160
+FD M + S+ MI Y N Y ++ M+ + E + + VL C +L
Sbjct: 183 ELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLG 242
Query: 161 DIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
D++ G+++ K G + V T +++MY KC + R VFD ++VV+W++MIA
Sbjct: 243 DLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIA 302
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GY QN + E L LF M+ ++ N +TL S+++ACA+L ++ G+ + Y+ G+
Sbjct: 303 GYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLIS 362
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
N ++ +ALL MY KCGNI AR +FD+L D V+W +MI+G +G+ + A+ L+ K
Sbjct: 363 NVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMK 422
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKC 394
+ PN++T +++A G++ +G M I +E + I VD++ +
Sbjct: 423 EIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACI---VDLFCRS 479
Query: 395 HVIADA-RYIFETTSEKDVIAWNSIISG 421
+ DA +I E +V+ W +++S
Sbjct: 480 GRLIDAYEFICRMEVEPNVVIWGTLLSA 507
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 190/547 (34%), Positives = 293/547 (53%), Gaps = 25/547 (4%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS----SRQ 201
+++ +L+ C ++ G + H +VK G D FV L+ +Y K +GS +R+
Sbjct: 61 LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFK---LGSDSLLTRR 117
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFD K+VVSW SMI GYV+ + + LF M + +E N TL +++ AC+++
Sbjct: 118 VFDGLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGN 177
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L GK HG +++ G + N ++++L+DMY + DAR +FDEL D V WT +I
Sbjct: 178 LVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISA 237
Query: 322 YTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
+T++ ++AL F K A P++ T SVL+A LG L G +H+ I G
Sbjct: 238 FTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSG 297
Query: 381 YTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-------------V 426
V ++LVDMY KC + ++ +F+ S ++ ++W+++++ N
Sbjct: 298 NVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK 357
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D + +VI ACA L AV G +H ++G +V V +AL++ YAKCG A
Sbjct: 358 EVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWR-DVIVESALVDLYAKCGCINFAY 416
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD M +N +TW++MI G+ G G ++ +F M+ E ++P+ + F +L ACSHTG
Sbjct: 417 RVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTG 476
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V + F M + P ++HY CMVDLL RAG LEEA +EN D SL+
Sbjct: 477 LVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVL 536
Query: 607 LHGCGLY-SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C + E + KK++EL P YV ++N+Y + GRW +VRELMK R L
Sbjct: 537 LGACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQL 596
Query: 666 SKSPGCS 672
K PG S
Sbjct: 597 KKMPGQS 603
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 224/464 (48%), Gaps = 27/464 (5%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKY-ARSVFDSMPNPDFYSFQVMIRWYFL 123
+ FHA ++ GL D+ L+S+Y G R VFD + D S+ MI Y
Sbjct: 80 RQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVR 139
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+E + M E + F S V+KAC E+ ++ G H +V+ G + +
Sbjct: 140 EGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVI 199
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN-RMREGF 241
L+ L+DMY + +RQ+FDE L+ + V WT++I+ + +ND +E L F + R
Sbjct: 200 LSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHR 259
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T GS++TAC L L QG+ +H ++ G N ++L+DMY KCG + ++
Sbjct: 260 LCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQ 319
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+FD + + + VSW+A++ Y +G +KA+ LF + K D + + +V+ A A L
Sbjct: 320 RLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDLY----SFGTVIRACAGLA 375
Query: 362 NLNMGRMVHSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+ G+ +H IR G D V +ALVD+YAKC I A +F+ +++I WNS+I
Sbjct: 376 AVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIH 435
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G N + PD ++ + ++ AC+ G V T + +
Sbjct: 436 GFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTGKYGIK 495
Query: 464 SNVYVGTALLNFYAKCGDAQSAR-MVFDAMREKNTVTWSAMIGG 506
V +++ + G + A ++ +A ++ W ++G
Sbjct: 496 PGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGA 539
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 190/365 (52%), Gaps = 20/365 (5%)
Query: 59 CKSTGSL---KAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C G+L K FH +++ G +N + L+ MYG AR +FD + PD +
Sbjct: 172 CSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCW 231
Query: 115 QVMIRWYFLNDLYKDIVEFY--KCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+I + NDLY++ + F+ K RL DN+ F VL AC L + +G ++H ++
Sbjct: 232 TTVISAFTRNDLYEEALGFFYLKHRAHRLCP-DNYTFGSVLTACGNLGRLRQGEEIHAKV 290
Query: 173 VKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+ G + V + LVDMY KC + S+++FD ++N VSW++++A Y N ++ +
Sbjct: 291 IAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAV 350
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
LF M+ E + + G+++ ACA L A+ GK +H ++ G + + +AL+D+Y
Sbjct: 351 NLFREMK----EVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLY 406
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
KCG I A VFD + + +L++W +MI G+ Q+G A+++F P+ ++
Sbjct: 407 AKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFI 466
Query: 352 SVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFET 406
+L A + G ++ R M GI+ G+E Y N +VD+ + ++ +A + E
Sbjct: 467 GLLFACSHTGLVDQARHYFDLMTGKYGIKPGVEHY---NCMVDLLGRAGLLEEAENLIEN 523
Query: 407 TSEKD 411
++
Sbjct: 524 AECRN 528
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 141/281 (50%), Gaps = 15/281 (5%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + G L+ HA +I G + N + LV MYG G V+ ++ +FD M N
Sbjct: 269 SVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNR 328
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ ++ Y N Y+ V ++ +KE D + F V++AC L + G ++H
Sbjct: 329 NSVSWSALLAVYCHNGDYEKAVNLFR----EMKEVDLYSFGTVIRACAGLAAVTPGKEIH 384
Query: 170 CEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
C+ ++ GG D V + LVD+YAKC I + +VFD +N+++W SMI G+ QN +
Sbjct: 385 CQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSMIHGFAQNGSSG 444
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL---KIGIEINSHLVT 285
+ +F M + ++ + I+ L+ AC+ + Q + H + L K GI+
Sbjct: 445 IAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQAR--HYFDLMTGKYGIKPGVEHYN 502
Query: 286 ALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGYTQS 325
++D+ + G + +A ++ + C D W ++ T +
Sbjct: 503 CMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTT 543
>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
Length = 673
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 278/524 (53%), Gaps = 25/524 (4%)
Query: 148 VFSKVLKACC---ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+F+++L+AC E D ++ +V G D V T L+ A+C D+ +R+ F
Sbjct: 12 IFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEGAREAF 71
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D KNVVSW SMIA ++ L ++ RM V+ + I+ + +C+ LR L
Sbjct: 72 DRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLE 131
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
QGK +H + G + + AL++MY KC + AR F+ + S D+VSW +MI ++
Sbjct: 132 QGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHS 191
Query: 324 QSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
Q G D+AL+ + + P +T+ L A+ L + +++ IRLGLE D
Sbjct: 192 QLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDL 251
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------D 424
V +ALV KC + AR +F+ ++V++W+ +I+ L D
Sbjct: 252 LVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLD 311
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P+ VTL+SV+ ACAS GA+ G HA + G + V AL+N Y KCG S
Sbjct: 312 GIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGF-EAETNVANALVNMYGKCGHLGS 370
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
AR VFDAM +N V+W+AM+ GY G + +F M E +QPN + F ++L CSH
Sbjct: 371 ARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSH 430
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G+V +G + F+ M DF VP +HY C++DLL RAG LEEA E + MP+EPD + +
Sbjct: 431 AGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWN 490
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLELH-PDKACYYVLVSNLYASD 647
+ L C ++S D + + K +L P + YVL+SN+Y +
Sbjct: 491 SLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLSNMYTDE 534
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/446 (28%), Positives = 217/446 (48%), Gaps = 25/446 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+S G ++ AR FD +P + S+ MI + + +E Y+ M +
Sbjct: 52 TALISALARCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVK 111
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQ 201
+ + L +C LRD+++G +H + V G D+ V G LV+MY+KCR + +R+
Sbjct: 112 PSDISYIHALCSCSGLRDLEQGKSIH-DRVATDGFDTQVFVGNALVNMYSKCRRLDLARE 170
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLR 260
F+ K+VVSW SMIA + Q + E L + RM E +E +ITL + A LR
Sbjct: 171 AFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLR 230
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ K L +++G+E + + +AL+ KCG + AR+VFD + ++VSW+ +I
Sbjct: 231 SAGDTKLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIA 290
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
+ G A++LF PN VT+ SVL A A G + GR H+ G E
Sbjct: 291 ALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEA 350
Query: 381 YT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD---------------- 423
T V NALV+MY KC + AR +F+ + ++V++W ++++G
Sbjct: 351 ETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMA 410
Query: 424 -DNVSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+ + P+ +T VSV+ C+ G V G H G++ + G +++ + G
Sbjct: 411 LEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGC-VIDLLGRAGW 469
Query: 482 AQSARMVFDAMR-EKNTVTWSAMIGG 506
+ A + M E + W++++G
Sbjct: 470 LEEAEELLRTMPVEPDKAAWNSLLGA 495
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDS 105
+ L++L C STG++ + HA + G + LV+MYG GH+ AR+VFD+
Sbjct: 318 VTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDA 377
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
M + S+ M+ Y + ++ +K M + + F VL C + +G
Sbjct: 378 MTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDG 437
Query: 166 MK 167
++
Sbjct: 438 LE 439
>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
Length = 702
Score = 311 bits (797), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 198/570 (34%), Positives = 307/570 (53%), Gaps = 37/570 (6%)
Query: 146 NFVFSKVLKACCEL----RDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGS 198
+F VL+A L + G + H +K G G F L+ MYA+ +
Sbjct: 10 SFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVAD 69
Query: 199 SRQVFDETLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
++++F +VV+W +M++ VQ+ E + M V + +T S + AC
Sbjct: 70 AQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPAC 129
Query: 257 AKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDEL--CSIDLV 313
++L L G+ +H Y++K + NS + +AL+DMY + AR VFD + L
Sbjct: 130 SRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLG 189
Query: 314 SWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
W AMI GY Q+G ++AL+LF + A F P T+ASVL A A+ VH
Sbjct: 190 MWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGY 249
Query: 373 GIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
++ G+ + V NAL+DMYA+ AR IF DV++WN++I+G
Sbjct: 250 VVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADA 309
Query: 423 -----------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+ V P+A+TL++++ CA L A G +H Y+ + L ++V VG+A
Sbjct: 310 FQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHAL-DTDVAVGSA 368
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML-NEEVQP 530
L++ YAKCG +R VFD + +NT+TW+ +I YGM G GG + LF M + E +P
Sbjct: 369 LVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARP 428
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
NEV F L+ACSH+GMV G + F++M RD P+ C+VD+L RAGRL+EA
Sbjct: 429 NEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAM 488
Query: 591 MENMPI-EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
+ +M E VS + L C L+ LGE+ +++LEL P++A +YVL+ N+Y++ G+
Sbjct: 489 VTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQ 548
Query: 650 WIRVNQVRELMKQRGLSKSPGCSLVDLDIA 679
W R +VR M++RG++K PGCS +++D A
Sbjct: 549 WTRAAEVRSRMRRRGVAKEPGCSWIEVDGA 578
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 139/473 (29%), Positives = 223/473 (47%), Gaps = 38/473 (8%)
Query: 69 HALLIVDGLTNDKCN---TKLVSMYGSFGHVKYARSVF-DSMPNP-DFYSFQVMIRWYFL 123
HA + +GL + L+SMY G V A+ +F + P D ++ M+
Sbjct: 37 HAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQ 96
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSF 181
+ ++ + V+ M D F+ L AC L +D G ++H ++K +SF
Sbjct: 97 SGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSF 156
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLD--KNVVSWTSMIAGYVQNDCAQEGLVLFNRM-- 237
V + LVDMYA +G +RQVFD D K + W +MI GY Q +E L LF RM
Sbjct: 157 VASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEA 216
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
GFV + T+ S++ ACA+ A + +HGY++K G+ N + AL+DMY + G
Sbjct: 217 EAGFVP-CETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKT 275
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD---FFPNHVTIASVL 354
AR +F + D+VSW +I G G+ A +L + + + PN +T+ ++L
Sbjct: 276 DVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLL 335
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
A L G+ +H +R L+ D V +ALVDMYAKC +A +R +F+ ++ I
Sbjct: 336 PGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTI 395
Query: 414 AWNSII-----SGLDDNVS-------------PDAVTLVSVISACASLGAVQVGSSL-HA 454
WN +I GL + P+ VT ++ ++AC+ G V G L HA
Sbjct: 396 TWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHA 455
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR--EKNTVTWSAMIG 505
G+ + + +++ + G A + +M E+ WS M+G
Sbjct: 456 MERDHGVEPTPDIL-ACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLG 507
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 6/159 (3%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H + L D + LV MY G + +R+VFD +P + ++ V+I Y ++
Sbjct: 348 KEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMH 407
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFV-FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSF 181
L + + M + N V F L AC +D G+++ + + G P
Sbjct: 408 GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPD 467
Query: 182 VLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMI 218
+L +VD+ + + + + E ++ V +W++M+
Sbjct: 468 ILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 187/535 (34%), Positives = 280/535 (52%), Gaps = 31/535 (5%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
P+ F +V YAK I +RQ+FDE + VS+ ++I+GY +VLF RM
Sbjct: 72 PNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRM 131
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
RE E + TL L+ AC L K LH + + G + S + A + Y K G +
Sbjct: 132 RELGFEVDGFTLSGLIAACCDRVDLI--KQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLL 189
Query: 298 RDARSVFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
R+A SVF + + D VSW +MIV Y Q KAL L+ + + F + T+ASVL+A
Sbjct: 190 REAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Query: 357 SAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKC---HVIADARYIFETTSEKDV 412
L +L GR H I+ G ++ V + L+D Y+KC ++D+ +F+ D+
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDL 309
Query: 413 IAWNSIISGLDDNVS------------------PDAVTLVSVISACASLGAVQVGSSLHA 454
+ WN++ISG N PD + V V SAC++L + G +H
Sbjct: 310 VLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHG 369
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+ K + S+ + V AL++ Y K G+ AR VFD M E N V+++ MI GY G G
Sbjct: 370 LAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGT 429
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
+L L+ ML+ + PN + F ILSAC+H G V EG K F +M FK P +HY CM
Sbjct: 430 EALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCM 489
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
+DLL RAG+LEEA F++ MP +P + A L C + L E K+++ + P A
Sbjct: 490 IDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAA 549
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFS 683
YV+++N+YA G+W + VR+ M+ + + K PGCS +++ +A D+S
Sbjct: 550 TPYVMLANMYADAGKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWS 604
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 231/501 (46%), Gaps = 64/501 (12%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY--- 121
K+ HAL + + + + V++Y G + YAR+ FDS P+ +S+ V+++ Y
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIVKAYAKD 87
Query: 122 ---------FLNDLYKDIVEF-------------------YKCMRKRLKEHDNFVFSKVL 153
F + D V + +K MR+ E D F S ++
Sbjct: 88 SKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLI 147
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDSF--VLTGLVDMYAKCRDIGSSRQVFDETLD--K 209
ACC+ D+ + ++HC V GG DS+ V V Y+K + + VF +D +
Sbjct: 148 AACCDRVDLIK--QLHCFAVS-GGFDSYSSVNNAFVTYYSKGGLLREAVSVF-YGMDGLR 203
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+ VSW SMI Y Q+ + L L+ M + + TL S++ A L L G+ H
Sbjct: 204 DEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFH 263
Query: 270 GYILKIGIEINSHLVTALLDMYVKCG---NIRDARSVFDELCSIDLVSWTAMIVGYT-QS 325
G ++K G NSH+ + L+D Y KCG + D+ VF E+ S DLV W MI GY+
Sbjct: 264 GKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNE 323
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED--YTV 383
+ ++A+K F + P+ + V SA + L + + G+ +H L I+ + +V
Sbjct: 324 EHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISV 383
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
NAL+ +Y K + DAR +F+ E + +++N +I G LD +
Sbjct: 384 NNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGI 443
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+P+ +T V+++SACA G V G + + + +++ + G + A
Sbjct: 444 APNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 487 MVFDAMREK-NTVTWSAMIGG 506
DAM K +V W+A++G
Sbjct: 504 RFIDAMPYKPGSVAWAALLGA 524
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 187/473 (39%), Gaps = 96/473 (20%)
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN----------------------- 296
R L GK LH +K + +++L +++Y KCG
Sbjct: 22 RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPNVFSYNVIV 81
Query: 297 --------IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
I AR +FDE D VS+ +I GY + A+ LF + F +
Sbjct: 82 KAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGF 141
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETT 407
T++ +++A +++ + +H + G + Y+ + NA V Y+K ++ +A +F
Sbjct: 142 TLSGLIAACCD--RVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 408 SE-KDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+D ++WNS+I + D TL SV++A SL + G
Sbjct: 200 DGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGG 259
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCG--DAQS-ARMVFDAMREKNTVTWSAMIGG 506
H K G N +VG+ L++FY+KCG D S + VF + + V W+ MI G
Sbjct: 260 RQFHGKLIKAG-FHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISG 318
Query: 507 YGMQGD-GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC------ 559
Y M + ++ F M +P++ F + SACS+ +G K + +
Sbjct: 319 YSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQG-KQIHGLAIKSNIP 377
Query: 560 ------------------------RDFKFVPSMK--HYVCMVDLLARAGRLEEALEFMEN 593
R F +P + + CM+ A+ G EAL +
Sbjct: 378 SNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQR 437
Query: 594 M---PIEPDVSLFGAFLHGCGLYSRFDLGEV---MIKKMLELHPDKACYYVLV 640
M I P+ F A L C + D G+ +K+ ++ P+ Y ++
Sbjct: 438 MLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMI 490
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 11/175 (6%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
C NL S K H L I + +++ N L+S+Y G++ AR VFD MP
Sbjct: 355 CSNL----SSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPEL 410
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK-- 167
+ SF MI+ Y + + + Y+ M +N F +L AC +DEG K
Sbjct: 411 NAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYF 470
Query: 168 -VHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDK-NVVSWTSMIAG 220
E K+ P++ + ++D+ + + + + D K V+W +++
Sbjct: 471 NTMKETFKI-EPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGA 524
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 276/518 (53%), Gaps = 53/518 (10%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
P+ + L+ YA C + +R +FDE DKNVV + MI YV N Q+ L++F M
Sbjct: 69 PNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTM 128
Query: 238 -REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+GF N T ++ AC+ L G +HG ++K+G+++N ++ L+ MY KC
Sbjct: 129 ANQGFYPDN-YTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKW 187
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ AR V DE+ D+VSW +M+ GY Q+G + ALKL + + P+ T+ S+L A
Sbjct: 188 LDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA 247
Query: 357 SAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
V N C + + +F EK +I+WN
Sbjct: 248 --------------------------VTN------TSCDNVLYVKDMFVKLKEKSLISWN 275
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+I+ +N V PDAV++ SV+ AC L A +G +H Y ++
Sbjct: 276 VMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERK 335
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L N+ + AL++ YAKCG + AR VFD M ++ V+W++MI YGM G G ++AL
Sbjct: 336 K-LRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVAL 394
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F M + P+ + F ++L+ACSH G+V EG CF M ++ P ++HY CMVDLL
Sbjct: 395 FKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMA-EYGITPGIEHYNCMVDLLG 453
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
RAG+++EA MP+EP+ ++G+ L C +YS ++ + + +L P+++ YYVL
Sbjct: 454 RAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVL 513
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+SN+YA GRW V VR +M +G+ K PG S V+++
Sbjct: 514 LSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEIN 551
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 163/612 (26%), Positives = 264/612 (43%), Gaps = 112/612 (18%)
Query: 1 MKLISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCK 60
MK IS L R S K Q + FS T Q+ Q F +L C +L +
Sbjct: 1 MKTISSLSRQFSTAK----QTKPFSLTTQKP-------QLSPKFTALTEDLCNKILDVNP 49
Query: 61 STGSLKAFHALLIVDG--LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMI 118
+LK H+ +++D N KL+ Y + G Y R +FD + + + F VMI
Sbjct: 50 DAKTLKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMI 109
Query: 119 RWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
R Y N LY+D + +K M + DN+ + VLKAC ++ G+++H +VK+G
Sbjct: 110 RSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLD 169
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
+ ++ GLV MY KC+ + ++R+V DE +++VSW SM+AGY QN + L L M
Sbjct: 170 MNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREM 229
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
+ ++ + T+GSL+ A C N+
Sbjct: 230 EDLKLKPDAGTMGSLLPAVTN---------------------------------TSCDNV 256
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+ +F +L L+SW MI Y + P++A+ L+ + P+ V+I+SVL A
Sbjct: 257 LYVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPAC 316
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
L +GR +H R L ++ NAL+DMYAKC + +AR +F+ +DV++W
Sbjct: 317 GDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWT 376
Query: 417 SIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
S+IS D +PD + VSV++AC+ G V G
Sbjct: 377 SMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEG---------- 426
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT----WSAMIGGYGMQGDGGG 515
R F+ M E ++ M+ G G
Sbjct: 427 --------------------------RYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDE 460
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK-HYVCM 574
+ L M ++PNE ++ ++LSAC + + F+ P +YV +
Sbjct: 461 AYHLTRQM---PMEPNERVWGSLLSACRVYSSMNIA---LLAADHLFQLAPEQSGYYVLL 514
Query: 575 VDLLARAGRLEE 586
++ A+AGR ++
Sbjct: 515 SNIYAKAGRWQD 526
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 201/455 (44%), Gaps = 68/455 (14%)
Query: 51 PCLNLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSM 106
PC+ L C +G+L H ++ GL N LVSMYG + AR V D M
Sbjct: 141 PCV--LKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEM 198
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P D S+ M+ Y N + D LK C E+ D+ +
Sbjct: 199 PGRDMVSWNSMVAGYAQNGRFND----------------------ALKLCREMEDLK--L 234
Query: 167 KVHCEIVKVGGPDSFVLTGLVDMYAK--CRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
K PD+ + L+ C ++ + +F + +K+++SW MIA YV N
Sbjct: 235 K----------PDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLISWNVMIAVYVNN 284
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E + L+ +M+ VE + +++ S++ AC L A G+ +H Y+ + + N L
Sbjct: 285 AMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLE 344
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+DMY KCG +++AR+VFD++ D+VSWT+MI Y SG A+ LF + + F
Sbjct: 345 NALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFT 404
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSL----GIRLGLEDYTVINALVDMYAKCHVIADA 400
P+ + SVL+A + G ++ GR +L GI G+E Y N +VD+ + I +A
Sbjct: 405 PDWIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHY---NCMVDLLGRAGKIDEA 461
Query: 401 RYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
++ + P+ S++SAC ++ + + +
Sbjct: 462 YHLTRQMP-----------------MEPNERVWGSLLSACRVYSSMNIALLAADHLFQLA 504
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
S YV L N YAK G Q V M K
Sbjct: 505 PEQSGYYV--LLSNIYAKAGRWQDVETVRSIMNSK 537
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 88/216 (40%), Gaps = 49/216 (22%)
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+V+PDA TL + S + + +LH N +G L+ YA CG+
Sbjct: 46 DVNPDAKTLKKLHSK------ILIDQNLHP----------NPSLGIKLMRAYAACGEPCY 89
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
R +FD + +KN V ++ MI Y G +L +F M N+ P+ + +L ACS
Sbjct: 90 TRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSV 149
Query: 545 TG---------------------MVGEGWKCFYSMC-------RDFKFVPS--MKHYVCM 574
+G +G G Y C R +P M + M
Sbjct: 150 SGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSM 209
Query: 575 VDLLARAGRLEEALEF---MENMPIEPDVSLFGAFL 607
V A+ GR +AL+ ME++ ++PD G+ L
Sbjct: 210 VAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLL 245
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 311 bits (796), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 190/624 (30%), Positives = 313/624 (50%), Gaps = 32/624 (5%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFD 104
S+ +++L C++ L + HAL++ L + L+ MY + +RS+FD
Sbjct: 316 SVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFD 375
Query: 105 SMPNPDFYSFQVMIRWYFLNDLY-KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
M D S+ +I D + +D + Y+ M S VL+AC L ++
Sbjct: 376 RMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELK 435
Query: 164 EGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G VH +++ G V LV+MYAKC +G +R+VFD +++ + W SMI Y +
Sbjct: 436 GGKLVHAHVIESGLEGDLVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQE 495
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
D E L LF M+ V ++IT +++ AC L G+ +H I+ G + +
Sbjct: 496 KD-PHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRV 554
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
TAL +MY KCG++ +AR VFD + D+VSW MI Y Q + A+ L +
Sbjct: 555 ATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGM 614
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P+ T S+L+A + L GR +HS LE D ++ L+ MYA C + +AR
Sbjct: 615 RPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNARE 674
Query: 403 IFET------TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISA 439
IF+ +D+ W S+I+ + + V D VT +SV++A
Sbjct: 675 IFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNA 734
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
CA L ++ G ++HA ++G L+++V V +++ Y KCG A +VF+ + K+
Sbjct: 735 CAHLSDLRQGQAIHARVMRRG-LATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISL 793
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+A+I Y G G +L +F + + ++ + + F +LSACSH G++ EG + F SM
Sbjct: 794 WTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEFFASMA 853
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
+ P+M+H+ C+VDLLARAG L A EF+ MP+ + + A L C ++ +
Sbjct: 854 -ELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHGDVERA 912
Query: 620 EVMIKKMLELHPDKACYYVLVSNL 643
+ +K+ L P+ YV +SN+
Sbjct: 913 RRVAEKLEALDPESEAPYVTLSNI 936
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 181/625 (28%), Positives = 296/625 (47%), Gaps = 50/625 (8%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKL------VSMYGSFGHVKYARSVFDSMP 107
LL C G+L+ LI D L + + ++MY G + A F M
Sbjct: 15 TLLTACTKLGALE--EGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMK 72
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
D S+ VMI Y + + ++ ++ M ++ F +L C +++G +
Sbjct: 73 RRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQ 132
Query: 168 VHCEIVKVGGPDSFVLT-GLVDMYAKCRDIGSSR-QVFDETLDKNVVSWTSMIAGYVQND 225
+H +V+ V+ L+ MY++CR SR Q F ++VVSWT MI Y Q+
Sbjct: 133 IHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDG 192
Query: 226 CAQEGLVLFNRMREGFVEG---NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
+ LF RE +EG N +T S+++ C L QG+ +H +++ +E SH
Sbjct: 193 KFSLSIQLF---REMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLE--SH 247
Query: 283 LVTALL----DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
L +L +MYVKCG + A F + D+VSWT MI Y+Q G +L+LF +
Sbjct: 248 LDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREM 307
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVI 397
PN VT S+LS L GR +H+L + LE + V+ N+L+ MY++C
Sbjct: 308 LLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSW 367
Query: 398 ADARYIFETTSEKDVIAWNSII------------------SGLDDNVSPDAVTLVSVISA 439
D+R +F+ S +D ++W++II S L + V P + L V+ A
Sbjct: 368 EDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEA 427
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C SL ++ G +HA+ + GL VG +L+N YAKCG AR VFD + ++ +
Sbjct: 428 CGSLAELKGGKLVHAHVIESGL--EGDLVGISLVNMYAKCGTVGEARKVFDRINNRSRIL 485
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W++MI Y + D +L LF +M E V P+ + F T+L+AC + + G + ++
Sbjct: 486 WNSMITAY-QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENG-RTIHTRI 543
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS---LFGAFLHGCGLYSRF 616
D F ++ + ++ A+ G L EA ++M VS + A++ G
Sbjct: 544 VDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAI 603
Query: 617 DLGEVMIKKMLELHPDKACYYVLVS 641
L M ++ + PDKA + L++
Sbjct: 604 SLCWAM--QLEGMRPDKATFTSLLN 626
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 166/576 (28%), Positives = 284/576 (49%), Gaps = 37/576 (6%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYAR-SVF 103
S+ +++L C++ L + HAL++ L + L+ MY + +R F
Sbjct: 111 SVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTF 170
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
M D S+ VMI Y + + ++ ++ M ++ F +L C ++
Sbjct: 171 ARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLE 230
Query: 164 EGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
+G ++H +V+ D VL ++MY KC + + Q F ++VVSWT MI
Sbjct: 231 QGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGA 290
Query: 221 YVQNDCAQEGLVLFNRMREGFVEG---NQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
Y Q+ L LF RE +EG N +T S+++ C L QG+ +H +++ +
Sbjct: 291 YSQDGKFSLSLQLF---REMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSL 347
Query: 278 EINSHLVTA--LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT-QSGYPDKALKL 334
E SH+V A LL MY +C + D+RS+FD + D VSW+ +I+ + + + AL L
Sbjct: 348 E--SHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPL 405
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKC 394
+ P + ++ VL A L L G++VH+ I GLE V +LV+MYAKC
Sbjct: 406 YRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGISLVNMYAKC 465
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVIS 438
+ +AR +F+ + + I WNS+I+ + VSPD +T ++V++
Sbjct: 466 GTVGEARKVFDRINNRSRILWNSMITAYQEKDPHEALHLFREMQPEGVSPDRITFMTVLN 525
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
AC + ++ G ++H G +++V V TAL N YAKCG AR VFD+M ++ V
Sbjct: 526 ACVNAADLENGRTIHTRIVDSG-FAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVV 584
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
+W+ MI Y DG G+++L M E ++P++ FT++L+ACS + +G + +S
Sbjct: 585 SWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNRLVDG-RQIHSW 643
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ + + ++ + A G L A E +N+
Sbjct: 644 IAESRLENDIVMVTGLITMYANCGSLNNAREIFDNI 679
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 209/434 (48%), Gaps = 34/434 (7%)
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRD 195
M +R D + +L AC +L ++EG + + D V ++MY KC
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG---NQITLGSL 252
+ + Q F ++VVSWT MI Y Q+ L LF RE +EG N +T S+
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLF---REMLLEGTAPNSVTFVSI 117
Query: 253 VTACAKLRALHQGKWLHGYILKIGIEINSHLVTA--LLDMYVKCGNIRDAR-SVFDELCS 309
++ C L QG+ +H +++ +E SH+V A LL MY +C + D+R F +
Sbjct: 118 LSGCEAPSLLEQGRQIHALVVESSLE--SHVVVANSLLGMYSRCRSWEDSRMQTFARMKR 175
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
D+VSWT MI Y+Q G +++LF + PN VT S+LS L GR +
Sbjct: 176 RDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQI 235
Query: 370 HSLGIRLGLE---DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
H+L + LE D V+N ++MY KC + A F +DV++W +I
Sbjct: 236 HALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDG 295
Query: 422 ------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
L + +P++VT VS++S C + ++ G +HA + L S+V V
Sbjct: 296 KFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESS-LESHVVVA 354
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG-GGSLALFSDMLNEEV 528
+LL Y++C + +R +FD M +++V+WS +I + +L L+ ML+E V
Sbjct: 355 NSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGV 414
Query: 529 QPNEVIFTTILSAC 542
P + + +L AC
Sbjct: 415 MPKTLALSMVLEAC 428
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 166/330 (50%), Gaps = 20/330 (6%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ +++ + +L+TAC KL AL +GK + + +E++ + ++MYVKCG + A
Sbjct: 6 IPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAV 65
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
F + D+VSWT MI Y+Q G +L+LF + PN VT S+LS
Sbjct: 66 QTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPS 125
Query: 362 NLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARY-IFETTSEKDVIAWNSII 419
L GR +H+L + LE + V+ N+L+ MY++C D+R F +DV++W +I
Sbjct: 126 LLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMI 185
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
L + +P++VT VS++S C + ++ G +HA + L
Sbjct: 186 GAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLE 245
Query: 463 SS-NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
S ++ V +N Y KCG A F M+ ++ V+W+ MIG Y G SL LF
Sbjct: 246 SHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFR 305
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+ML E PN V F +ILS C ++ +G
Sbjct: 306 EMLLEGTAPNSVTFVSILSGCEAPSLLEQG 335
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 40/276 (14%)
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ PD V + ++++AC LGA++ G + L ++ V +N Y KCG A
Sbjct: 6 IPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQ-LELDIGVRNLTINMYVKCGCLDGA 64
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
F M+ ++ V+W+ MIG Y G SL LF +ML E PN V F +ILS C
Sbjct: 65 VQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAP 124
Query: 546 GMVGEGWKC---------------------FYSMCRDF-----KFVPSMKH-----YVCM 574
++ +G + YS CR + + MK + M
Sbjct: 125 SLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVM 184
Query: 575 VDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCGLYSRFDLGE----VMIKKML 627
+ ++ G+ +++ M +E P+ F + L GC S + G ++++ L
Sbjct: 185 IGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSL 244
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
E H D + + N+Y G Q MK+R
Sbjct: 245 ESHLDIGVLNLTI-NMYVKCGCLDGAVQTFARMKRR 279
>gi|297605857|ref|NP_001057684.2| Os06g0493800 [Oryza sativa Japonica Group]
gi|255677066|dbj|BAF19598.2| Os06g0493800 [Oryza sativa Japonica Group]
Length = 721
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 322/620 (51%), Gaps = 31/620 (5%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK-- 139
CN L+S Y + GH+ AR VFD MP + S+ V+I + D + + M +
Sbjct: 40 CNNLLLS-YQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGG 98
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
++F + ++ C +D G +VH VK+G D V LVDMYAKC +GS
Sbjct: 99 ERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGS 158
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCA---QEGLVLFNRMREGFVEGNQITLGSLVTA 255
S + F T ++V+SWTSMIA V + + +VLF +M V T ++
Sbjct: 159 SWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKV 218
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI--DLV 313
L GK +HG ++K+G E++ L TALL MY +CG + + + C I D
Sbjct: 219 FDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRL---ACRIRHDAF 275
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
S T+++ Y ++G +A+++F D + I S+L + LG L + + +H
Sbjct: 276 SRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYA 335
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-LDDNVSPDAV 431
++ D ++NA+V +Y KC IA + +F T KD I+W ++++ + +++S +A+
Sbjct: 336 LKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEAL 395
Query: 432 ----------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ SV+ AC++ ++ G +H+ K G+ + V AL+
Sbjct: 396 FFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGV-DDDTSVENALVTM 454
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
YAKCG Q A +F++MR + ++W+A+I + G+ ++ LF M E V P++ F
Sbjct: 455 YAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTF 514
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+LS+CS G+V EG + F M + P M+HY CMVDL ARAGR +A++F++ MP
Sbjct: 515 VGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMP 574
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
+PD ++ A L C ++ DLG + KK+LE+ P+ Y+++S+++AS W +
Sbjct: 575 CQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKAR 634
Query: 656 VRELMKQRGLSKSPGCSLVD 675
R L+ + L K G S +D
Sbjct: 635 NRTLLDFQQLRKDVGSSQLD 654
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 206/451 (45%), Gaps = 27/451 (5%)
Query: 168 VHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
VH VK+G +++ L+ Y + +R VFDE +NVVSW+ +IA +
Sbjct: 24 VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83
Query: 227 AQEGLVLFNRMREGFVEG--NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ L LF M G N T+ +LV CA+ + G+ +H +K+G++ + +
Sbjct: 84 LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI---VGYTQSGYPDKALKLFTDKKWA 341
L+DMY KCG + + F ++SWT+MI V + SGY D A+ LF
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADA 400
+P + T + +L L G+ VH +++G E D + AL+ MY +C + D
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGM-DE 262
Query: 401 RYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASL 443
D + S+++ N + D + S++ C+SL
Sbjct: 263 ITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSL 322
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G ++V +H Y+ K + + A++ Y KCGD S+ +VF+ + K+T++W+A+
Sbjct: 323 GQLRVVKEIHCYALKN-FFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTAL 381
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
+ Y +L F +M+ + ++ + T++L ACS T + GW+ +S
Sbjct: 382 LTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQ-IHSRVVKLG 440
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+V + A+ G ++ AL+ +M
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSM 471
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 296/533 (55%), Gaps = 28/533 (5%)
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS---SRQVFDETLDKNVVSWTSMIAGYV 222
++H ++++ G D F + +V + ++ GS +R VF + + + S+I G
Sbjct: 6 QIHAQMLRTGLFFDPFTASKIV-AFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
+ QE L+ + M + ++ T SL +C R +GK +H + K+G +++
Sbjct: 65 DKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASDTY 121
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWA 341
L++MY CG + AR VFD++ +VSW MI + Q P++A++LF K
Sbjct: 122 AQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSE 181
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINA-LVDMYAKCHVIADA 400
+ PN VT+ +VL+A A+ +L M + +H G + V+N L+D+Y KC + A
Sbjct: 182 NVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLA 241
Query: 401 RYIFETTSEKDVIAWNSIISG-LDDN----------------VSPDAVTLVSVISACASL 443
R +F+ EK++ +WN +I+G ++D+ + D VT+ S++ AC L
Sbjct: 242 RDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHL 301
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
GA+++G LHAY KQ + +V +GTAL++ YAKCG ++A VF M EK+ +TW+A+
Sbjct: 302 GALELGKWLHAYIKKQ-RIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTAL 360
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I G M G +L F +M + V+P+ + F +L+ACSH G V EG F SM +
Sbjct: 361 ILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYG 420
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
P+++HY +VD+L RAGR+ EA E +++MP+ PD + G L C ++ + E
Sbjct: 421 IQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAA 480
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
K++LE+ P + YVL+SN+Y S +W + RELM +RG+ K PGCS +++
Sbjct: 481 KQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEV 533
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 238/452 (52%), Gaps = 28/452 (6%)
Query: 65 LKAFHALLIVDGLTNDKCNTKLVSMYGSF---GHVKYARSVFDSMPNPDFYSFQVMIRWY 121
LK HA ++ GL D + + S G ++YAR VF +PNP Y+ +IR
Sbjct: 4 LKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGC 63
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
+L+++ + FY+ M + D + F + K+C R+ EG ++HC K+G D+
Sbjct: 64 TDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGKQIHCHSTKLGFASDT 120
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR-MRE 239
+ L++MY+ C + S+R+VFD+ DK VVSW +MI + Q D E + LF+R M+
Sbjct: 121 YAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKS 180
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
V+ N++TL +++TACA+ R L K +H YI + G + L T L+D+Y KCG ++
Sbjct: 181 ENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQL 240
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
AR +FD+ +L SW MI G+ + ++AL LF + + + VT+AS+L A
Sbjct: 241 ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTH 300
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
LG L +G+ +H+ + ++ D + ALVDMYAKC I A +F EKDV+ W ++
Sbjct: 301 LGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTAL 360
Query: 419 ISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQG 460
I GL V PDA+T V V++AC+ G V G S ++ S G
Sbjct: 361 ILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYG 420
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ + + G L++ + G A + +M
Sbjct: 421 IQPTIEHYG-GLVDILGRAGRIAEAEELIKSM 451
>gi|255578965|ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
Length = 1530
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/444 (37%), Positives = 249/444 (56%), Gaps = 20/444 (4%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSI 310
L++ + + Q K LH I + N+ V LL +YV + DA ++FDE+
Sbjct: 1085 LISTLLNCKNICQIKQLHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFDEMPQK 1144
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
+ VSW+ MI G+ + G + K F + P++ T+ V+ A L+MGR++H
Sbjct: 1145 NPVSWSIMIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIH 1204
Query: 371 SLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------- 422
+ ++ GL D+ V ALVDMYAKC VI DA+ +F+ KD++ W +I G
Sbjct: 1205 CVVLKYGLHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAK 1264
Query: 423 ----------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL 472
++ PD + +VS+++ACA LGA+ +H Y + S +V +GTA+
Sbjct: 1265 ESLVLFDHLREEGFVPDKIAMVSIVNACAKLGAMNKARFVHEY-VNRNRFSLDVILGTAM 1323
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
++ YAKCGD SAR +FD M KN ++WSAMI YG G G +L LF ML+ + PN
Sbjct: 1324 IDMYAKCGDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNN 1383
Query: 533 VIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME 592
+ F ++L ACSH G+V +G M F P +KH+ CMVDLL RAG+L EA F+E
Sbjct: 1384 ITFVSLLYACSHAGLVEDGLTLLSLMWESFGVRPDIKHHTCMVDLLGRAGQLTEAFRFIE 1443
Query: 593 NMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIR 652
NM +E D L+ + L C ++ R DL E K +LEL P Y+L+SN+YA+ G+W
Sbjct: 1444 NMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYILLSNIYANAGQWKD 1503
Query: 653 VNQVRELMKQRGLSKSPGCSLVDL 676
V ++R+LM +R L K PG + ++L
Sbjct: 1504 VAKIRDLMTKRKLKKIPGYTWIEL 1527
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 206/371 (55%), Gaps = 14/371 (3%)
Query: 59 CKSTGSLKAFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQV 116
CK+ +K HAL+ + + N KL+ +Y + A ++FD MP + S+ +
Sbjct: 1092 CKNICQIKQLHALITTNSVLYNNLTVANKLLYVYVHHKCLTDAYALFDEMPQKNPVSWSI 1151
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG 176
MI + + + +K + + + DN+ V+KAC + +D G +HC ++K G
Sbjct: 1152 MIGGFVKVGEFMQCYKTFKELIRNGVQPDNYTLPFVIKACRDTVALDMGRLIHCVVLKYG 1211
Query: 177 -GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
D FV LVDMYAKC+ I ++ +FD K++V+WT MI GY + A+E LVLF+
Sbjct: 1212 LHLDHFVCAALVDMYAKCKVIEDAKLLFDVMPSKDLVTWTVMIGGYAECGNAKESLVLFD 1271
Query: 236 RMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
+RE GFV ++I + S+V ACAKL A+++ +++H Y+ + ++ L TA++DMY KC
Sbjct: 1272 HLREEGFV-PDKIAMVSIVNACAKLGAMNKARFVHEYVNRNRFSLDVILGTAMIDMYAKC 1330
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G++ AR +FD + +++SW+AMI Y G KAL+LF + PN++T S+L
Sbjct: 1331 GDVDSAREIFDNMHHKNVISWSAMIAAYGYHGQGKKALELFPMMLSSGILPNNITFVSLL 1390
Query: 355 SASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA-RYIFETTS 408
A + G + G M S G+R ++ +T +VD+ + + +A R+I T
Sbjct: 1391 YACSHAGLVEDGLTLLSLMWESFGVRPDIKHHT---CMVDLLGRAGQLTEAFRFIENMTV 1447
Query: 409 EKDVIAWNSII 419
EKD W+S++
Sbjct: 1448 EKDEGLWSSLL 1458
>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Glycine max]
Length = 686
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 187/533 (35%), Positives = 284/533 (53%), Gaps = 24/533 (4%)
Query: 165 GMKVHCEIVKVGGPD--SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G VH I++ SF+ LV+MY+K S++ V T + VV+WTS+I+G V
Sbjct: 26 GRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLSLTNPRTVVTWTSLISGCV 85
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
N L+ F+ MR V N T + A A L GK LH LK G ++
Sbjct: 86 HNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVF 145
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ + DMY K G +AR++FDE+ +L +W A + Q G A+ F D
Sbjct: 146 VGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVD 205
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADAR 401
PN +T + L+A A + +L +GR +H +R ED +V N L+D Y KC I +
Sbjct: 206 GEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSE 265
Query: 402 YIFET--TSEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASL 443
+F + ++V++W S+++ L N V P + SV+SACA L
Sbjct: 266 LVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAEL 325
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G +++G S+HA + K + N++VG+AL++ Y KCG + A VF M E+N VTW+AM
Sbjct: 326 GGLELGRSVHALALK-ACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAM 384
Query: 504 IGGYGMQGDGGGSLALFSDMLNEE--VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
IGGY GD +L+LF +M + + + V ++LSACS G V G + F SM
Sbjct: 385 IGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGR 444
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
+ P +HY C+VDLL R+G ++ A EF++ MPI P +S++GA L C ++ + LG++
Sbjct: 445 YGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKI 504
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+K+ EL PD + +V+ SN+ AS GRW VR+ M+ G+ K+ G S V
Sbjct: 505 AAEKLFELDPDDSGNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWV 557
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 253/537 (47%), Gaps = 50/537 (9%)
Query: 46 SLPSIPCLNLLG-------LCKSTGSLKAFHALLIVD---GLTNDKCNTKLVSMYGSFGH 95
++P P NLLG L +S+ +A HA ++ L + CN LV+MY
Sbjct: 2 NVPRPP--NLLGSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCN-HLVNMYSKLDL 58
Query: 96 VKYARSVFDSMPNP-DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLK 154
A+ V S+ NP ++ +I N + + + MR+ ++F F V K
Sbjct: 59 PNSAQLVL-SLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFK 117
Query: 155 ACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS 213
A L G ++H +K G D FV DMY+K +R +FDE +N+ +
Sbjct: 118 ASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLAT 177
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W + ++ VQ+ + + F + E N IT + + ACA + +L G+ LHG+I+
Sbjct: 178 WNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIV 237
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS--IDLVSWTAMIVGYTQSGYPDKA 331
+ + + L+D Y KCG+I + VF + S ++VSW +++ Q+ ++A
Sbjct: 238 RSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERA 297
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDM 390
+F + + P I+SVLSA A+LG L +GR VH+L ++ +E+ + +ALVD+
Sbjct: 298 CMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDL 356
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISG---LDD----------------NVSPDAV 431
Y KC I A +F E++++ WN++I G L D ++ V
Sbjct: 357 YGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYV 416
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGL--LSSNVYVGTALLNFYAKCGDAQSARMVF 489
TLVSV+SAC+ GAV+ G L + + +G + +++ + G A
Sbjct: 417 TLVSVLSACSRAGAVERG--LQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFI 474
Query: 490 DAMREKNTVT-WSAMIGGYGMQGDGG-GSLA---LFSDMLNEEVQPNEVIFTTILSA 541
M T++ W A++G M G G +A LF L+ + N V+F+ +L++
Sbjct: 475 KRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFE--LDPDDSGNHVVFSNMLAS 529
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 18/287 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW-YFLNDLYKDIVEFYKCM-----RK 139
L+ YG G + + VF + + + ++ W L L ++ E CM RK
Sbjct: 251 LIDFYGKCGDIVSSELVFSRIGS----GRRNVVSWCSLLAALVQNHEEERACMVFLQARK 306
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGS 198
++ D F+ S VL AC EL ++ G VH +K ++ FV + LVD+Y KC I
Sbjct: 307 EVEPTD-FMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEY 365
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF--VEGNQITLGSLVTAC 256
+ QVF E ++N+V+W +MI GY L LF M G + + +TL S+++AC
Sbjct: 366 AEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSAC 425
Query: 257 AKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
++ A+ +G + + GIE + ++D+ + G + A + + +S
Sbjct: 426 SRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISV 485
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKW---ADFFPNHVTIASVLSASAQ 359
++G + K K+ +K + D NHV +++L+++ +
Sbjct: 486 WGALLGACKMHGKTKLGKIAAEKLFELDPDDSGNHVVFSNMLASAGR 532
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 293/549 (53%), Gaps = 24/549 (4%)
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLV-DMYAKCRDIGSSRQVFDETLD 208
S LK +L + G ++H ++K+G + L V +Y KC++ ++FDE
Sbjct: 77 SHALKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPL 136
Query: 209 KNVVSWTSMIAGYVQNDC----AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
KNVVSW ++I G V+ +C + G F +M + N ITL L+ A +L +
Sbjct: 137 KNVVSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGI 196
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ LH +ILK G + N + +AL+D Y K G + +A+S FDE+ S DLV W M+ Y
Sbjct: 197 CRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYAL 256
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G KA +F + + T S++++ LG+ +G+ VH L IRL + D V
Sbjct: 257 NGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLV 316
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+ALVDMY+K I DAR F+ K++++W ++ G +
Sbjct: 317 ASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYT 376
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD + L S++S+C +L A +HAY + G + + + AL++ Y+KCG SA
Sbjct: 377 YPDELALASILSSCGNLSATSEVVQVHAYVVENGF-EAFLSIANALVSAYSKCGSIGSAF 435
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F ++ E + ++W++++G Y G + +F +L+ V+P++V F +LSAC+H G
Sbjct: 436 QSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGG 495
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
V EG F M ++ +P +HY ++DLL RAG L+EA+ + +MP+EP GAF
Sbjct: 496 FVLEGLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAF 555
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C +Y L +K+ + P++ Y L+SN+YAS G W V +VR+LM++R
Sbjct: 556 LGACKVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDF 615
Query: 667 KSPGCSLVD 675
K PGCS ++
Sbjct: 616 KVPGCSWME 624
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 158/318 (49%), Gaps = 8/318 (2%)
Query: 52 CLNLLGLCKST------GSLKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFD 104
C+ L GL +++ G + H ++ G +N + LV Y FG V A+S FD
Sbjct: 178 CITLNGLLRASIELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFD 237
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
+ + D + VM+ Y LN + +K MR + D F F+ ++ +C L
Sbjct: 238 EVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGL 297
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G +VH I+++ D V + LVDMY+K +I +R+ FD J KN+VSWT+M GY Q
Sbjct: 298 GKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQ 357
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ +E + L M + +++ L S++++C L A + +H Y+++ G E +
Sbjct: 358 HGDGKEXMRLLQEMIRVYTYPDELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSI 417
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
AL+ Y KCG+I A F + D++SWT+++ Y G + + +F ++
Sbjct: 418 ANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNV 477
Query: 344 FPNHVTIASVLSASAQLG 361
P+ V VLSA A G
Sbjct: 478 RPDKVAFLGVLSACAHGG 495
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 143/304 (47%), Gaps = 29/304 (9%)
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
+G ++ P+ D F +H L SA+LG L+ G+ +H+ I+LG
Sbjct: 51 LGXLRASLPETGFTXLVDSCSTHSFSSHA-----LKISAKLGFLHGGKQLHAHVIKLGXC 105
Query: 380 D-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
+ ++ N ++ +Y KC D +F+ K+V++WN++I G+ +
Sbjct: 106 NLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHC 165
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
++P+ +TL ++ A L V + LH + K G SN +VG+AL++ YA
Sbjct: 166 FRQMVLEMMAPNCITLNGLLRASIELNDVGICRQLHCFILKSG-FDSNCFVGSALVDSYA 224
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
K G A+ FD + ++ V W+ M+ Y + G G + +F M E V+ + FT+
Sbjct: 225 KFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTS 284
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
++++C G G G K + + F + +VD+ ++ +E+A + + M ++
Sbjct: 285 MINSCGVLGSCGLG-KQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVK 343
Query: 598 PDVS 601
VS
Sbjct: 344 NIVS 347
>gi|125597302|gb|EAZ37082.1| hypothetical protein OsJ_21424 [Oryza sativa Japonica Group]
Length = 671
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 322/620 (51%), Gaps = 31/620 (5%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK-- 139
CN L+S Y + GH+ AR VFD MP + S+ V+I + D + + M +
Sbjct: 40 CNNLLLS-YQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGG 98
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
++F + ++ C +D G +VH VK+G D V LVDMYAKC +GS
Sbjct: 99 ERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGS 158
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCA---QEGLVLFNRMREGFVEGNQITLGSLVTA 255
S + F T ++V+SWTSMIA V + + +VLF +M V T ++
Sbjct: 159 SWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKV 218
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI--DLV 313
L GK +HG ++K+G E++ L TALL MY +CG + + + C I D
Sbjct: 219 FDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRL---ACRIRHDAF 275
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
S T+++ Y ++G +A+++F D + I S+L + LG L + + +H
Sbjct: 276 SRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYA 335
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-LDDNVSPDAV 431
++ D ++NA+V +Y KC IA + +F T KD I+W ++++ + +++S +A+
Sbjct: 336 LKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEAL 395
Query: 432 ----------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ SV+ AC++ ++ G +H+ K G+ + V AL+
Sbjct: 396 FFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGV-DDDTSVENALVTM 454
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
YAKCG Q A +F++MR + ++W+A+I + G+ ++ LF M E V P++ F
Sbjct: 455 YAKCGVVQVALKIFNSMRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTF 514
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+LS+CS G+V EG + F M + P M+HY CMVDL ARAGR +A++F++ MP
Sbjct: 515 VGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMP 574
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
+PD ++ A L C ++ DLG + KK+LE+ P+ Y+++S+++AS W +
Sbjct: 575 CQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKAR 634
Query: 656 VRELMKQRGLSKSPGCSLVD 675
R L+ + L K G S +D
Sbjct: 635 NRTLLDFQQLRKDVGSSQLD 654
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/451 (25%), Positives = 206/451 (45%), Gaps = 27/451 (5%)
Query: 168 VHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
VH VK+G +++ L+ Y + +R VFDE +NVVSW+ +IA +
Sbjct: 24 VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIAASSRLGV 83
Query: 227 AQEGLVLFNRMREGFVEG--NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ L LF M G N T+ +LV CA+ + G+ +H +K+G++ + +
Sbjct: 84 LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI---VGYTQSGYPDKALKLFTDKKWA 341
L+DMY KCG + + F ++SWT+MI V + SGY D A+ LF
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADA 400
+P + T + +L L G+ VH +++G E D + AL+ MY +C + D
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGM-DE 262
Query: 401 RYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASL 443
D + S+++ N + D + S++ C+SL
Sbjct: 263 ITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSL 322
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G ++V +H Y+ K + + A++ Y KCGD S+ +VF+ + K+T++W+A+
Sbjct: 323 GQLRVVKEIHCYALKN-FFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTAL 381
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
+ Y +L F +M+ + ++ + T++L ACS T + GW+ +S
Sbjct: 382 LTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQ-IHSRVVKLG 440
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+V + A+ G ++ AL+ +M
Sbjct: 441 VDDDTSVENALVTMYAKCGVVQVALKIFNSM 471
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 298/582 (51%), Gaps = 55/582 (9%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETL 207
F + LK C RD+ G +H +K P S L+ + +Y+KCR + ++R+VFD T
Sbjct: 11 FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTH 70
Query: 208 DKNV-------------------------------VSWTSMIAGYVQNDCAQEGLVLFNR 236
D NV VS+ ++IA Y + Q LF
Sbjct: 71 DCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLE 130
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
MRE F++ + TL ++TAC L + LH + G++ + AL+ Y K G
Sbjct: 131 MREAFLDMDGFTLSGIITACGINVGL--IRQLHALSVVTGLDSYVSVGNALITSYSKNGF 188
Query: 297 IRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
+++AR +F L D VSW +M+V Y Q KAL+L+ + + T+ASVL+
Sbjct: 189 LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLT 248
Query: 356 ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCH-VIADARYIFETTSEKDVI 413
A + +L G H+ I+ G ++ V + L+D+Y+KC + D R +F+ S D++
Sbjct: 249 AFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLV 308
Query: 414 AWNSIISG------LDDNV------------SPDAVTLVSVISACASLGAVQVGSSLHAY 455
WN++ISG L D PD +LV VISAC+++ + G +H
Sbjct: 309 LWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGL 368
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
+ K + S+ + V AL+ Y+KCG+ + A+ +FD M E NTV++++MI GY G G
Sbjct: 369 ALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQ 428
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
SL LF ML P + F ++L+AC+HTG V +G F M + F P H+ CM+
Sbjct: 429 SLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMI 488
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC 635
DLL RAG+L EA +E +P +P + A L C ++ +L ++L+L P A
Sbjct: 489 DLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAA 548
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YV+++N+Y+ +GR VR+LM+ RG+ K PGCS ++++
Sbjct: 549 PYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVN 590
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 229/454 (50%), Gaps = 32/454 (7%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S Y +V+ A +FD MP PD S+ +I Y + + + MR+ + D
Sbjct: 80 LISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMD 139
Query: 146 NFVFSKVLKACCELRDIDEGM--KVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQ 201
F S ++ AC I+ G+ ++H V V G DS+V G L+ Y+K + +R+
Sbjct: 140 GFTLSGIITAC----GINVGLIRQLHALSV-VTGLDSYVSVGNALITSYSKNGFLKEARR 194
Query: 202 VFD-ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+F + D++ VSW SM+ Y+Q+ + L L+ M + + TL S++TA ++
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQ 254
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN-IRDARSVFDELCSIDLVSWTAMI 319
L G H ++K G NSH+ + L+D+Y KCG + D R VFDE+ + DLV W MI
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMI 314
Query: 320 VGYT-QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
GY+ D+AL+ F + P+ ++ V+SA + + + + GR VH L ++L +
Sbjct: 315 SGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDI 374
Query: 379 ED--YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------------- 421
+V NAL+ MY+KC + DA+ +F+T E + +++NS+I+G
Sbjct: 375 PSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQ 434
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
L+ +P +T +SV++ACA G V+ G ++ + + +++ +
Sbjct: 435 RMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRA 494
Query: 480 GD-AQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
G +++ R++ + WSA++G + G+
Sbjct: 495 GKLSEAERLIETIPFDPGFFFWSALLGACRIHGN 528
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L++MY G+++ A+++FD+MP + S+ MI Y + + + ++ M +
Sbjct: 382 NNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGF 441
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSS 199
N F VL AC +++G K++ ++K P++ + ++D+ + + +
Sbjct: 442 TPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEA 500
Query: 200 RQVFDE-TLDKNVVSWTSMIAG 220
++ + D W++++
Sbjct: 501 ERLIETIPFDPGFFFWSALLGA 522
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 179/558 (32%), Positives = 298/558 (53%), Gaps = 26/558 (4%)
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSS 199
+ +NF F + KAC +L + +H +VK P D +V T +VDMY KC + +
Sbjct: 49 QPNNFTFPFLSKACAKLSHLTNSQIIHTHVVK--SPFYSDIYVQTAMVDMYVKCGKVDDA 106
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
+FD+ +N+ SW +MI G+ Q LF MR + T+ L A
Sbjct: 107 YNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISA 166
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL--CSIDLVSWTA 317
++L K +H ++ G++ ++ + + Y KCG ++ A+ VF + + VSW +
Sbjct: 167 KSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNS 226
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
+I Y G A+K + F P+ TI S+LS+ Q L G ++H G +LG
Sbjct: 227 LIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLG 286
Query: 378 LE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDDNV---- 426
+ D ++IN L+ MY++C I+ A +F+ S + ++W ++ISG +DD +
Sbjct: 287 CDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFN 346
Query: 427 -------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
PD VT++S+IS C GA+ +G + Y++ L +V V AL++ YAKC
Sbjct: 347 AMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHEL-KKDVVVCNALIDMYAKC 405
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G AR +F ++ + V+W+AMI + G+ +L LFS + ++PN + F +L
Sbjct: 406 GSLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVL 465
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
AC H G + +G +CF M + P + HY CM+DLL R G+L EALE +++MP++PD
Sbjct: 466 QACCHGGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPD 525
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
++GA L C +++ ++GE + + + EL P A +V ++N+YAS GRW V +R+
Sbjct: 526 EGIWGALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKT 585
Query: 660 MKQRGLSKSPGCSLVDLD 677
M+ + KSPG S+V ++
Sbjct: 586 MRSNQMRKSPGKSVVQVN 603
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 217/426 (50%), Gaps = 29/426 (6%)
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W S I G V A + L LF++++ ++ N T L ACAKL L + +H +++
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K + ++ TA++DMYVKCG + DA ++FD++ ++ SW AMI+G++Q G D+
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYA 392
LF + P+ T+ + A +L + VH++GI GL+ D +V N + Y+
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
Query: 393 KCHVIADARYIFE--TTSEKDVIAWNSIISG-----------------LDDNVSPDAVTL 433
KC + A+ +F + + ++WNS+I+ L D PDA T+
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+S++S+C A+ G +H + + G S++ + L++ Y++CGD SA ++FD M
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLG-CDSDISLINTLISMYSRCGDISSATILFDGMS 318
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG-W 552
+ V+W+AMI GY G +L LF+ M +P+ V +++S C TG +G G W
Sbjct: 319 IRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHW 378
Query: 553 KCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
Y+ + K VC ++D+ A+ G L +A E ++P VS + A + C
Sbjct: 379 IDNYASLHELK----KDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVS-WTAMIAAC 433
Query: 611 GLYSRF 616
L F
Sbjct: 434 ALNGEF 439
Score = 159 bits (401), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 140/524 (26%), Positives = 237/524 (45%), Gaps = 39/524 (7%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T +V MY G V A ++FD MP + S+ MI + + + MR
Sbjct: 90 QTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGT 149
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D + +A + + VH ++ G D+ V + Y+KC ++ ++
Sbjct: 150 RPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKM 209
Query: 202 VFD--ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
VF + ++ VSW S+IA Y + + + + + + T+ SL+++C +
Sbjct: 210 VFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQP 269
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
AL G +HG+ ++G + + L+ L+ MY +CG+I A +FD + VSWTAMI
Sbjct: 270 EALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMI 329
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
GY++ G D AL LF + P+ VT+ S++S + G L +G + + L
Sbjct: 330 SGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELK 389
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVIS 438
+D V NAL+DMYAKC + DAR IF + + V++W ++ I+
Sbjct: 390 KDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAM------------------IA 431
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
ACA G + L + ++ G+ +N+ A+L G + R F M E+ +
Sbjct: 432 ACALNGEFREALDLFSLLSESGIEPNNITF-LAVLQACCHGGYLEKGRECFMMMTERYGI 490
Query: 499 T-----WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-HTGM-VGEG 551
+S MI G +G +L + DM ++P+E I+ +L AC H M +GE
Sbjct: 491 NPGLDHYSCMIDLLGRKGKLIEALEVIQDM---PMKPDEGIWGALLGACKIHNNMEIGE- 546
Query: 552 WKCFYSMCRDFKFVPSMK-HYVCMVDLLARAGRLEEALEFMENM 594
Y F+ P + +V M ++ A GR +E + M
Sbjct: 547 ----YVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTM 586
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 201/444 (45%), Gaps = 33/444 (7%)
Query: 60 KSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNP--DFYSFQV 116
KS LKA HA+ I GL D + ++ Y G ++ A+ VF + S+
Sbjct: 167 KSLRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNS 226
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG 176
+I Y Y D V+ YK + + D +L +C + + G +H ++G
Sbjct: 227 LIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLG 286
Query: 177 -GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
D ++ L+ MY++C DI S+ +FD + VSWT+MI+GY + + LVLFN
Sbjct: 287 CDSDISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFN 346
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
M E + + +T+ SL++ C K AL G W+ Y ++ + + AL+DMY KCG
Sbjct: 347 AMEETGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCG 406
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
++ DAR +F L + +VSWTAMI +G +AL LF+ + PN++T +VL
Sbjct: 407 SLNDAREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQ 466
Query: 356 ASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEK 410
A G L GR M GI GL+ Y+ ++D+ + + +A + +
Sbjct: 467 ACCHGGYLEKGRECFMMMTERYGINPGLDHYS---CMIDLLGRKGKLIEALEVIQ----- 518
Query: 411 DVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG- 469
D + PD +++ AC +++G + Y + L V V
Sbjct: 519 ------------DMPMKPDEGIWGALLGACKIHNNMEIGEYVSRYLFE---LQPRVAVSF 563
Query: 470 TALLNFYAKCGDAQSARMVFDAMR 493
+ N YA G + MR
Sbjct: 564 VEMANIYASVGRWDEVAAMRKTMR 587
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 173/403 (42%), Gaps = 60/403 (14%)
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
L W + I G G KAL LF K PN+ T + A A+L +L +++H+
Sbjct: 17 LTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHT 76
Query: 372 LGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD------ 424
++ D V A+VDMY KC + DA +F+ +++ +WN++I G
Sbjct: 77 HVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDR 136
Query: 425 -----------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
PDA T++ + A S +++ ++HA + G L ++ V +
Sbjct: 137 VFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETG-LDADTSVSNTWI 195
Query: 474 NFYAKCGDAQSARMVFDAMRE--KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
Y+KCG+ Q A+MVF +++ +++V+W+++I Y G ++ + +L + +P+
Sbjct: 196 AAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPD 255
Query: 532 EVIFTTILSACSHTGMV-------GEGWK--------------CFYSMCRDFK------- 563
++LS+C + G G++ YS C D
Sbjct: 256 ASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFD 315
Query: 564 --FVPSMKHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDL 618
+ + + M+ + GR+++AL ME +PD+ + + GCG L
Sbjct: 316 GMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGL 375
Query: 619 GEVM--IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
G + + EL D L+ ++YA G +N RE+
Sbjct: 376 GHWIDNYASLHELKKDVVVCNALI-DMYAKCG---SLNDAREI 414
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 6/121 (4%)
Query: 50 IPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-----CNTKLVSMYGSFGHVKYARSVFD 104
+ L+L+ C TG+L H + L K CN L+ MY G + AR +F
Sbjct: 358 VTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNA-LIDMYAKCGSLNDAREIFY 416
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
S+PN S+ MI LN +++ ++ + + + E +N F VL+ACC +++
Sbjct: 417 SLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEK 476
Query: 165 G 165
G
Sbjct: 477 G 477
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 270/499 (54%), Gaps = 23/499 (4%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL--FNRMREGFVEGNQITLGSLVTAC 256
+R++ + ++ W S++ + L + +MR V ++ T L+ A
Sbjct: 55 ARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAV 114
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
KLR + ++ H +ILK G + + + +L+ Y CG VFD D+VSWT
Sbjct: 115 FKLRDANPFQF-HAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWT 173
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
AMI G+ ++ +A+ F + K + N +T+ SVL A+ + ++ GR +H +
Sbjct: 174 AMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEA 233
Query: 377 GLE--DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
G D + ++LVDMY KC DA+ +F+ ++V+ W ++I+G
Sbjct: 234 GRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFV 293
Query: 422 ----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
L +V+P+ TL SV+SACA +GA+ G +H Y K + N VGT L++FYA
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSI-EINTTVGTTLIDFYA 352
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
KCG + A +VF+ +REKN TW+AMI G+ G G++ LF ML+ V PNEV F
Sbjct: 353 KCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIV 412
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+LSAC+H G+V EG + F SM F P HY CMVDL R G LEEA +E MP+E
Sbjct: 413 VLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIERMPME 472
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
P +++GA C ++ ++LG+ ++++L P + Y L++NLY+ W V +VR
Sbjct: 473 PTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVR 532
Query: 658 ELMKQRGLSKSPGCSLVDL 676
+ MK + + KSPGCS +++
Sbjct: 533 KQMKDQQVVKSPGCSWIEV 551
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 203/391 (51%), Gaps = 14/391 (3%)
Query: 20 QLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTN 79
+L F SY Q + S H+ P P L + + + FHA ++ G +
Sbjct: 86 RLSFLSYR------QMRRNGVVPSRHTFP--PLLKAVFKLRDANPFQ-FHAHILKFGFDS 136
Query: 80 DK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
D L+S Y + G ++ VFD + D S+ MI + ND + + ++ M+
Sbjct: 137 DLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMK 196
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP--DSFVLTGLVDMYAKCRDI 196
+ + VLKA + D+ G +H ++ G D F+ + LVDMY KC
Sbjct: 197 RSGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCY 256
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+++VFDE +NVV+WT++IAGYVQ C ++G+ +F M + V N+ TL S+++AC
Sbjct: 257 DDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A + ALH+G+ +H Y++K IEIN+ + T L+D Y KCG + +A VF+ L ++ +WT
Sbjct: 317 AHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWT 376
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH-SLGIR 375
AMI G+ GY A+ LF + PN VT VLSA A G + GR + S+ R
Sbjct: 377 AMINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKER 436
Query: 376 LGLEDYTVINA-LVDMYAKCHVIADARYIFE 405
LE A +VD++ + ++ +A+ + E
Sbjct: 437 FNLEPKADHYACMVDLFGRKGLLEEAKALIE 467
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 260/467 (55%), Gaps = 21/467 (4%)
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E + L+ M + + ++ +CA L G+ LH ++ K G E ++TAL+
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 289 DMYVKCGNIRDARSVFDE--LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
MY KCG + DAR VF+E S V + A+I GYT + A +F K +
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
VT+ ++ L +GR +H ++ GL+ + V+N+ + MY KC + R +F+
Sbjct: 156 SVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFD 215
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
K +I WN++ISG N V PD TLVSV+S+CA LGA ++
Sbjct: 216 EMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKI 275
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G + G + NV+V A ++ YA+CG+ AR VFD M K+ V+W+AMIG YG
Sbjct: 276 GHEVGKLVESNGFVP-NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYG 334
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
M G G L LF DM+ ++P+ +F +LSACSH+G+ +G + F +M R++K P
Sbjct: 335 MHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGP 394
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY C+VDLL RAGRL+EA+EF+E+MP+EPD +++GA L C ++ D+ E+ K++E
Sbjct: 395 EHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
P+ YYVL+SN+Y+ + ++R +M++R K PG S V+
Sbjct: 455 FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 218/449 (48%), Gaps = 24/449 (5%)
Query: 114 FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV 173
+ V +R L+ + + Y+ M + D F F +LK+C L G ++HC +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS--WTSMIAGYVQNDCAQEG 230
K G + FVLT L+ MY KC + +R+VF+E + +S + ++I+GY N +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
+F RM+E V + +T+ LV C L G+ LHG +K G++ ++ + + M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y+KCG++ R +FDE+ L++W A+I GY+Q+G L+L+ K + P+ T+
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSE 409
SVLS+ A LG +G V L G + + V NA + MYA+C +A AR +F+
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 410 KDVIAWNSIIS----------GL---DD----NVSPDAVTLVSVISACASLGAVQVGSSL 452
K +++W ++I GL DD + PD V V+SAC+ G G L
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQG 511
++ L + L++ + G A ++M E + W A++G +
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + F+ ++ E +PN + + ++S
Sbjct: 441 NVDMAELAFAKVI--EFEPNNIGYYVLMS 467
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 166/366 (45%), Gaps = 16/366 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYS--FQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
T L+SMY G V AR VF+ P S + +I Y N D ++ M++
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSS 199
D+ ++ C + G +H + VK GG DS VL + MY KC + +
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK-GGLDSEVAVLNSFITMYMKCGSVEAG 210
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R++FDE K +++W ++I+GY QN A + L L+ +M+ V + TL S++++CA L
Sbjct: 211 RRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHL 270
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
A G + + G N + A + MY +CGN+ AR+VFD + LVSWTAMI
Sbjct: 271 GAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 330
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGI 374
Y G + L LF D P+ VLSA + G + G M +
Sbjct: 331 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390
Query: 375 RLGLEDYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSIISG--LDDNVSPDAV 431
G E Y+ LVD+ + + +A E+ E D W +++ + NV +
Sbjct: 391 EPGPEHYS---CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAEL 447
Query: 432 TLVSVI 437
VI
Sbjct: 448 AFAKVI 453
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/557 (31%), Positives = 297/557 (53%), Gaps = 34/557 (6%)
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLD 208
S LK + + EG ++H ++K G L ++ +Y KC++ ++++F+E
Sbjct: 64 SNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPV 123
Query: 209 KNVVSWTSMIAGYVQNDCAQE--GLVL----FNRMREGFVEGNQITLGSLVTACAKLRAL 262
+NVVSW MI V + E G+ L F RM + + IT L+ C + +
Sbjct: 124 RNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDI 183
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G LH + +K+G +++ + AL+ +Y KCG + +AR VF ++ DLV W M+ Y
Sbjct: 184 EMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCY 243
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ--LGNLNMGRMVHSLGIRLGLE- 379
+ P++A ++F + + T +S+LS + L + G+ VHSL +R +
Sbjct: 244 VFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDS 303
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
D V +AL++MYAK I DAR +F+ S ++V+AWN++I G L
Sbjct: 304 DVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEML 363
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK---QGLLSSNVYVGTALLNFYAKC 479
+ PD +T+ S+IS+C A+ +HA++ K Q LS V +L++ Y+KC
Sbjct: 364 REGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLS----VANSLISAYSKC 419
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G SA F+ + + VTW+++I Y G S +F ML+ ++P+ + F +L
Sbjct: 420 GSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVL 479
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SAC+H G+V +G F M ++ VP +HY C+VDLL R G + EA E + +MPIE D
Sbjct: 480 SACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVD 539
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
GAF+ C L+S +L ++ +K+ + P+K+ Y ++SN++AS W V ++R+
Sbjct: 540 SDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKT 599
Query: 660 MKQRGLSKSPGCSLVDL 676
M+ + +K PGCS +++
Sbjct: 600 MEDKRDAKVPGCSWIEI 616
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/493 (28%), Positives = 237/493 (48%), Gaps = 32/493 (6%)
Query: 52 CLNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMP 107
C N L + G L K HA LI G +++S+Y + A+ +F+ +P
Sbjct: 63 CSNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELP 122
Query: 108 NPDFYSFQVMIRWYF-LNDLYKD-----IVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+ S+ +MIR ND + +++ M + D+ F+ ++ C + D
Sbjct: 123 VRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFND 182
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
I+ G+++HC VKVG D FV LV +YAKC + ++R+VF + +++V W M++
Sbjct: 183 IEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSC 242
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA--KLRALHQGKWLHGYILKIGIE 278
YV N +E +FN MR V G++ T SL++ + L GK +H +L+ +
Sbjct: 243 YVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFD 302
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
+ + +AL++MY K NI DAR VFDE+ ++V+W MIVG+ G ++ +KL +
Sbjct: 303 SDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEM 362
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVI 397
F P+ +TI+S++S+ + VH+ ++L +D+ +V N+L+ Y+KC I
Sbjct: 363 LREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSI 422
Query: 398 ADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISAC 440
A FE TS+ D++ W S+I L + PD + + V+SAC
Sbjct: 423 TSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSAC 482
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVT 499
A G V G T + + T L++ + G A + +M E ++ T
Sbjct: 483 AHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDT 542
Query: 500 WSAMIGGYGMQGD 512
A IG + +
Sbjct: 543 LGAFIGSCKLHSN 555
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 297/538 (55%), Gaps = 30/538 (5%)
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H I+ +G +SF+ T L+ YA C+ SR VFD KNV W S+I G V+N
Sbjct: 46 HSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCVKNRLY 105
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E LFN+M V + TL +L ++L AL GK +HG ++ G ++ + ++
Sbjct: 106 NEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSI 165
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG---YPDKALKLFTDKKWADFF 344
+ MY KCGN ++R VFDE+ + SW +I GY SG + ++ + + +
Sbjct: 166 MSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVKQMQMDEVR 225
Query: 345 PNHVTIASVLS-ASAQLGNLNMGRMVHSLGIR----LGLE-DYTVINALVDMYAKCHVIA 398
P+ TI+S+L +G + GR +H ++ LGL+ D + L+DMY++ + +
Sbjct: 226 PDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVV 285
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDN------------------VSPDAVTLVSVISAC 440
R +F+ ++V +W ++I+G +N V P+ V+LVSV+ AC
Sbjct: 286 VGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRVSLVSVLPAC 345
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF-DAMREKNTVT 499
+S + G +H ++ ++ L ++ V + AL++ Y+KCG SAR VF D K+ ++
Sbjct: 346 SSFSGLLSGRQIHGFAVRKEL-NNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAIS 404
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
WS+MI GYG+ G G ++ L+ ML ++P+ + ILSAC +G+V EG + S+
Sbjct: 405 WSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEGLNIYSSVI 464
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLG 619
D+ P+++ C+VD+L RAG+L+ AL+F++ +P+EP S++GA + ++ ++
Sbjct: 465 NDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSIIHGDLEMQ 524
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
E+ + +++L P YV +SNLYAS RW V +VR +MK + L K PGCS + ++
Sbjct: 525 ELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWISIN 582
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 242/505 (47%), Gaps = 34/505 (6%)
Query: 42 ASFHSLPSIPCLNLLGLCKSTGSLK---AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVK 97
++F PS+ L L + SLK H+ ++ GL+ N TKL+ Y H
Sbjct: 16 SAFEFDPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPY 75
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
++R VFDS+ + + + + +I N LY + + + M D+F S + K
Sbjct: 76 HSRLVFDSLQHKNVFLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSS 135
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
EL + G +H + ++ G D+ V ++ MY KC + SR+VFDE +N SW
Sbjct: 136 ELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNV 195
Query: 217 MIAGY-VQNDC--AQEGLVLFNRMREGFVEGNQITLGSLVTAC-AKLRALHQGKWLHGYI 272
+IAGY V +C +E +M+ V + T+ SL+ C + G+ LH YI
Sbjct: 196 LIAGYAVSGNCNFREETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYI 255
Query: 273 LK----IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
+K +G++ + HL L+DMY + + R VFD + ++ SWTAMI GY ++G
Sbjct: 256 VKNELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDS 315
Query: 329 DKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINA 386
D+AL LF D + D PN V++ SVL A + L GR +H +R L + ++ NA
Sbjct: 316 DEALSLFRDMQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNA 375
Query: 387 LVDMYAKCHVIADARYIFETTSE-KDVIAWNSIISG-----------------LDDNVSP 428
L+DMY+KC + AR +FE S KD I+W+S+ISG L + P
Sbjct: 376 LIDMYSKCGSLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRP 435
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D +T V ++SAC G V G ++++ + + + +++ + G A
Sbjct: 436 DMITTVGILSACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDF 495
Query: 489 FDAMR-EKNTVTWSAMIGGYGMQGD 512
A+ E W A++ + GD
Sbjct: 496 IKAIPVEPGPSVWGALVSCSIIHGD 520
>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
Length = 1251
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 172/569 (30%), Positives = 295/569 (51%), Gaps = 21/569 (3%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
++ M++ E +NF F V KAC L I VH ++K D FV T VDM+
Sbjct: 635 LFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVHTHLIKSPFWSDVFVGTATVDMFV 694
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC + + +VF+ ++ +W +M++G+ Q+ + LF MR + + +T+ +
Sbjct: 695 KCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTDKVFSLFREMRLDEIPPDSVTVMT 754
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ + + ++L K +H + +++G+++ + + + Y KCG++ A+ VF+ + D
Sbjct: 755 LIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYGKCGDLDSAKLVFEAIDRGD 814
Query: 312 --LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW ++ + G A + +F P+ T ++ ++ L GR++
Sbjct: 815 RTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINLAASCQNPQTLTQGRLI 874
Query: 370 HSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--- 425
HS I LG +D IN + MY+K AR +F+ + ++W +ISG +
Sbjct: 875 HSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMISGYAEKGDM 934
Query: 426 --------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
V+PD VTL+S+IS C G++++G + + G NV V A
Sbjct: 935 DEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKKDNVMVCNA 994
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ Y+KCG AR +FD EK VTW+ MI GY + G ++ LFS M++ + +PN
Sbjct: 995 LIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLDYKPN 1054
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
+ F +L AC+H+G + +GW+ F+ M + + P + HY CMVDLL R G+L+EALE +
Sbjct: 1055 HITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLDEALELI 1114
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
NM +PD ++GA L C ++ + E + L P A YV +SN+YA+ G W
Sbjct: 1115 HNMSAKPDAGIWGALLSACKIHRNVKIAEQAADSLFNLEPQMAAPYVEMSNIYAAAGMWD 1174
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDLDIAN 680
++R +MK + K PG S++ ++ N
Sbjct: 1175 GFARIRSMMKLWNIKKYPGESVIQVNGKN 1203
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 215/440 (48%), Gaps = 40/440 (9%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+V +W + V + E L+LF M+ G E N T + ACA+L + + +H
Sbjct: 612 SVNAWNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVH 671
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
+++K + + TA +DM+VKC ++ A VF+ + D +W AM+ G+ QSG+ D
Sbjct: 672 THLIKSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTD 731
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
K LF + + + P+ VT+ +++ +++ +L + +++H+ GIRLG++ TV N +
Sbjct: 732 KVFSLFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWI 791
Query: 389 DMYAKCHVIADARYIFETTSEKD--VIAWNSIISG-----------------LDDNVSPD 429
Y KC + A+ +FE D V++WNS+ L D PD
Sbjct: 792 SAYGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPD 851
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T +++ ++C + + G +H+++ G ++ ++ Y+K GD+ SAR++F
Sbjct: 852 LSTFINLAASCQNPQTLTQGRLIHSHAIHLG-TDQDIEAINTFISMYSKSGDSCSARLLF 910
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M + V+W+ MI GY +GD +LALF M V P+ V +++S C G +
Sbjct: 911 DIMPSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLE 970
Query: 550 -----EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS--- 601
+G Y +D V + ++D+ ++ G ++EA + +N + V+
Sbjct: 971 IGKWIDGRADMYGCKKDNVMVCN-----ALIDMYSKCGSIDEARDIFDNTSEKTMVTWTT 1025
Query: 602 ------LFGAFLHGCGLYSR 615
L G FL L+S+
Sbjct: 1026 MIAGYALNGIFLEAMELFSK 1045
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/523 (25%), Positives = 229/523 (43%), Gaps = 62/523 (11%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T V M+ + YA VF+ MP D ++ M+ + + + ++ MR
Sbjct: 687 TATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTDKVFSLFREMRLDEIP 746
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D+ ++++ + + +H +++G + V + Y KC D+ S++ V
Sbjct: 747 PDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVDLQATVSNTWISAYGKCGDLDSAKLV 806
Query: 203 FD--ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
F+ + D+ VVSW S+ + A + + M + + T +L +C +
Sbjct: 807 FEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLSTFINLAASCQNPQ 866
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L QG+ +H + + +G + + + + MY K G+ AR +FD + S VSWT MI
Sbjct: 867 TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPSRTCVSWTVMIS 926
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
GY + G D+AL LF P+ VT+ S++S + G+L +G+ + G +
Sbjct: 927 GYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKK 986
Query: 381 YTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------- 421
V+ NAL+DMY+KC I +AR IF+ TSEK ++ W ++I+G
Sbjct: 987 DNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKM 1046
Query: 422 LDDNVSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+D + P+ +T ++V+ ACA G+++ G H + VY + L+ Y
Sbjct: 1047 IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFH--------IMKQVYNISPGLDHY---- 1094
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
S M+ G +G +L L +M +P+ I+ +LS
Sbjct: 1095 --------------------SCMVDLLGRKGKLDEALELIHNM---SAKPDAGIWGALLS 1131
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSM-KHYVCMVDLLARAG 582
AC V + S+ F P M YV M ++ A AG
Sbjct: 1132 ACKIHRNVKIAEQAADSL---FNLEPQMAAPYVEMSNIYAAAG 1171
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 10/276 (3%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+NL C++ +L + H+ I G D + +SMY G AR +FD MP+
Sbjct: 856 INLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIMPS 915
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
S+ VMI Y + + + M K D ++ C + ++ G +
Sbjct: 916 RTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWI 975
Query: 169 --HCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
++ + V L+DMY+KC I +R +FD T +K +V+WT+MIAGY N
Sbjct: 976 DGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGI 1035
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL--V 284
E + LF++M + + N IT +++ ACA +L +G W + +I+K I+ L
Sbjct: 1036 FLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNISPGLDHY 1094
Query: 285 TALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMI 319
+ ++D+ + G + +A + + + D W A++
Sbjct: 1095 SCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALL 1130
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 36 ELDQTFASFHSLPS-------IPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK---C 82
++D+ A FH++ + L+L+ C GSL K + G D C
Sbjct: 933 DMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGKWIDGRADMYGCKKDNVMVC 992
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L+ MY G + AR +FD+ ++ MI Y LN ++ + +E + M
Sbjct: 993 NA-LIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALNGIFLEAMELFSKMIDLDY 1051
Query: 143 EHDNFVFSKVLKACCELRDIDEG 165
+ ++ F VL+AC +++G
Sbjct: 1052 KPNHITFLAVLQACAHSGSLEKG 1074
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 310/629 (49%), Gaps = 28/629 (4%)
Query: 72 LIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDI 130
+IV GL N L++M+G+ G V A +FD M D S+ MI Y +
Sbjct: 473 VIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKC 532
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDM 189
+ MR D ++ C G +H ++ S V+ LV+M
Sbjct: 533 FLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNM 592
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y+ + + +F ++++SW +MI+ YVQN + + L ++ N +T
Sbjct: 593 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTF 652
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
S + AC+ AL GK +H +L++ ++ N + +L+ MY KC ++ DA VF + +
Sbjct: 653 SSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 712
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL-NMGRM 368
D+VS+ +I GY KA+++F+ + A PN++T+ ++ + A +L N GR
Sbjct: 713 HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 772
Query: 369 VHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS 427
+H+ IR G L D V N+L+ MYAKC + + IF + + K++++WN+II+ NV
Sbjct: 773 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA---NVQ 829
Query: 428 P--------------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
D V L +S+CASL +++ G LH K GL S+ Y
Sbjct: 830 LGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGL-DSDSY 888
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V A ++ Y KCG V + W+ +I GY G + F M+
Sbjct: 889 VVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATG 948
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+P+ V F +LSACSH G+V +G + SM F P +KH VC+VDLL R GR EA
Sbjct: 949 RKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEA 1008
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
+F+E MP+ P+ ++ + L + ++G KK+LEL P YVL+SNLYA++
Sbjct: 1009 EKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATN 1068
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
RW V+++R MK ++K P CS + L
Sbjct: 1069 ARWADVDKLRSHMKTININKRPACSWLKL 1097
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 289/600 (48%), Gaps = 30/600 (5%)
Query: 67 AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
A HAL GL N T L+ +YGS G V A+ +F MP + S+ ++ N
Sbjct: 367 AIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNG 426
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLT 184
++ + Y+ MR+ + F+ V+ C L + G++V +++ G + V
Sbjct: 427 YLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVAN 486
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ M+ + + ++FD + + +SW +MI+ Y + ++F+ MR +
Sbjct: 487 SLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP 546
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ TL SL++ CA G +H L+ ++ + ++ AL++MY G + DA +F
Sbjct: 547 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 606
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ DL+SW MI Y Q+ ALK + PNH+T +S L A + G L
Sbjct: 607 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 666
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-- 421
G+MVH++ ++L L+ + V N+L+ MY KC+ + DA +F++ D++++N +I G
Sbjct: 667 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 726
Query: 422 -LDD--------------NVSPDAVTLVSVISACASLGAVQ-VGSSLHAYSTKQGLLSSN 465
L+D + P+ +T++++ + AS + G LHAY + G LS
Sbjct: 727 VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 786
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
YV +L+ YAKCG+ +S+ +F+++ KN V+W+A+I G G +L LF DM +
Sbjct: 787 -YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQH 845
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGR 583
+ + V LS+C+ + EG + + + K YV +D+ + G+
Sbjct: 846 AGNKLDRVCLAECLSSCASLASLEEGMQ-LHGL--GMKSGLDSDSYVVNAAMDMYGKCGK 902
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL--HPDKACYYVLVS 641
++E L+ + + I P + + G Y F E K+M+ PD + L+S
Sbjct: 903 MDEMLQVVPDQAIRPQ-QCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLS 961
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 213/430 (49%), Gaps = 25/430 (5%)
Query: 132 EFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK----VHCEIVKVG-GPDSFVLTGL 186
E + MR+ F + ++ AC E R DEG+ +H + G + ++ T L
Sbjct: 329 EMLRGMREPGVPLSGFALASLVTAC-ERRGRDEGIACGAAIHALTHRAGLMGNVYIGTAL 387
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ +Y + ++++F E ++NVVSWT+++ N +E L + +MR V N
Sbjct: 388 LHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNA 447
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++V+ C L G + ++ G++ + +L+ M+ G + DA +FD
Sbjct: 448 NAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDR 507
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D +SW AMI Y+ G K +F+D + P+ T+ S++S A + + G
Sbjct: 508 MEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHG 567
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+HSL +R L+ TVINALV+MY+ ++DA ++F S +D+I+WN++IS
Sbjct: 568 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQN 627
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
N SP+ +T S + AC+S GA+ G +HA Q L N+ V
Sbjct: 628 CNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAI-VLQLSLQRNLLV 686
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
G +L+ Y KC + A VF +M + V+++ +IGGY + DG ++ +FS M + +
Sbjct: 687 GNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGI 746
Query: 529 QPNEVIFTTI 538
+PN + I
Sbjct: 747 KPNYITMINI 756
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 217/459 (47%), Gaps = 27/459 (5%)
Query: 168 VHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSR---QVFDETLDKNVVSWTSMIAGYVQ 223
+H V++ P +F L+ Y + RD ++ +FDE D+ +W + ++G V+
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL---RALHQGKWLHGYILKIGIEIN 280
+ + MRE V + L SLVTAC + + G +H + G+ N
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
++ TALL +Y G + DA+ +F E+ ++VSWTA++V + +GY ++AL+ + +
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIAD 399
N A+V+S L N G V S I GL++ +V N+L+ M+ + D
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500
Query: 400 ARYIFETTSEKDVIAWNSIIS-----GL------------DDNVSPDAVTLVSVISACAS 442
A +F+ E D I+WN++IS G+ + PDA TL S++S CAS
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 560
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
GS +H+ + L SS V V AL+N Y+ G A +F M ++ ++W+
Sbjct: 561 SDHFSHGSGIHSLCLRSSLDSS-VTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNT 619
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI Y + +L + + PN + F++ L ACS G + +G K +++
Sbjct: 620 MISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDG-KMVHAIVLQL 678
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
++ ++ + + +E+A + ++MP VS
Sbjct: 679 SLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS 717
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 168 VHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSR---QVFDETLDKNVVSWTSMIAGYVQ 223
+H V++ P +F L+ Y + RD ++ +FDE D+ +W + ++G V+
Sbjct: 38 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97
Query: 224 NDCAQEGLV--LFNRMREGFVEGNQITLGSLVTACAKL---RALHQGKWLHGYILKIGIE 278
C ++G + MRE V + L SLVTAC + + G +H + G+
Sbjct: 98 --CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLM 155
Query: 279 INSHLVTALLDM 290
N ++ ALL +
Sbjct: 156 GNVYIGRALLHL 167
>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 830
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 202/651 (31%), Positives = 333/651 (51%), Gaps = 34/651 (5%)
Query: 55 LLGLCKSTGSL------KAFHALLIVDGLTND--KCNTKLVSMYGSFGHVKYARSVFDSM 106
LLG+ K GS+ K HAL + G + + T LV MY ++ V R VF+ M
Sbjct: 58 LLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM 117
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
+ ++ ++ Y + D++ + MR + F FS VL +D G
Sbjct: 118 LKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQ 177
Query: 167 KVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
VH + +K G + FV L++MYAKC + +R VF +++VSW +++AG V N
Sbjct: 178 HVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNG 237
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
E L LF+ R + T +++ CA L+ L + LH +LK G +++T
Sbjct: 238 RDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMT 297
Query: 286 ALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
AL+D Y K G + A VF + S ++VSWTAMI G Q+G A LF+ +
Sbjct: 298 ALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVA 357
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
PN +T +++L+ S + +H+ I+ E TV AL+ Y+K +A I
Sbjct: 358 PNDLTYSTILTVS----EASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSI 413
Query: 404 FETTSEKDVIAW-----------------NSIISGLDDNVSPDAVTLVSVISACASLGA- 445
F+ +KDV++W N+ I + P+ T+ S I ACAS A
Sbjct: 414 FKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAG 473
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
V +G HA S K + + V +AL++ YA+ G ++A+ VF+ +++ ++W++M+
Sbjct: 474 VDLGRQFHAISIKHRCHDA-LCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLS 532
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GY G +L +F M E + + + F +++ C+H G+V EG + F M RD+
Sbjct: 533 GYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGIT 592
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P+M HY CMVDL +RAG+L+E + +E MP +++ A L C ++ +LG++ +K
Sbjct: 593 PTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEK 652
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+L L P + YVL+SN+Y++ G+W ++VR+LM + + K GCS + +
Sbjct: 653 LLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQI 703
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 191/624 (30%), Positives = 327/624 (52%), Gaps = 34/624 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK- 142
+ LVS + G A+ +F S+ + + +I D ++ V+ + R +
Sbjct: 314 SALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDV 373
Query: 143 EHDNFVFSKVLKACCELRDIDEGMK----VHCEIVKVGGPD--SFVLTGLVDMYAKCRDI 196
D +V +L A E +EG++ VH +++ G D V GLV+MYAKC I
Sbjct: 374 NADTYVV--LLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAI 431
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
S+ ++F + +SW ++I+ QN +E ++ ++ MR+ + + L S +++C
Sbjct: 432 ESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSC 491
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A L+ L G+ +H +K G+++++ + L+ MY +CG + D VF+ + D VSW
Sbjct: 492 AGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWN 551
Query: 317 AMIVGYTQSGYP-DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
M+ S P + +K+F + PN VT ++L+A + L L +G+ VH+ ++
Sbjct: 552 TMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMK 611
Query: 376 LG-LEDYTVINALVDMYAKCHVIADARYIFETTSE-KDVIAWNSIISG--LDDNVSP--- 428
G +ED V NAL+ YAK + ++F S+ +D I+WNS+ISG + N+
Sbjct: 612 HGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMD 671
Query: 429 ------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
D T +++ACAS+ A++ G LHA+ + L S+V V +AL++ Y
Sbjct: 672 CVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSH-LESDVVVESALVDMY 730
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+KCG A +F++M ++N +W++MI GY G G ++ +F +ML P+ V F
Sbjct: 731 SKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFV 790
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
++LSACSH G+V G + ++ M D +P ++HY C++DLL RAG++++ E+++ MPI
Sbjct: 791 SVLSACSHAGLVERGLE-YFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPI 849
Query: 597 EPDVSLFGAFLHGCGLY---SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
EP+ ++ L C S DLG + +LE+ P YVL SN +A+ G W
Sbjct: 850 EPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDT 909
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
+ R M+Q K G S V L+
Sbjct: 910 AKARTAMRQATEKKEAGRSWVTLN 933
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 147/536 (27%), Positives = 253/536 (47%), Gaps = 53/536 (9%)
Query: 54 NLLGLCKSTG---SLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPN 108
+LL L + G S + H LI GL +D CN LV+ Y + A VFD MP
Sbjct: 66 DLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCN-HLVNSYAKGARLAAASQVFDEMPE 124
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK---EHDNFVFSKVLKACCE--LRDID 163
+ S+ ++ Y L+ + ++ ++ M + ++ +F F +L+AC + +
Sbjct: 125 RNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLG 184
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS---SRQVFDETLDKNVVSWTSMIA 219
++VH + K ++ V L+ MY C +G +++VFD T +++++W ++++
Sbjct: 185 FAVQVHGLVSKTEYASNTTVCNALISMYGSC-TVGPPILAQRVFDGTPIRDLITWNALMS 243
Query: 220 GYVQNDCAQEGLVLFNRMREG----FVEGNQITLGSLVT----ACAKLRALHQGKWLHGY 271
Y + LF M+ G + + T GSL+T + L Q + +
Sbjct: 244 VYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQ---VLVW 300
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
+LK G + ++ +AL+ + + G +A+ +F L + V+ +IVG + + ++A
Sbjct: 301 VLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEA 360
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLG----NLNMGRMVHSLGIRLGLEDY--TVIN 385
+K+F + N T +LSA A+ L +GR+VH +R GL D V N
Sbjct: 361 VKIFVGTR-NTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSN 419
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSP 428
LV+MYAKC I A IF+ D I+WN+IIS LD N +SP
Sbjct: 420 GLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISP 479
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
L+S +S+CA L + G +H + K G L + V L+ Y +CG V
Sbjct: 480 SNFALISSLSSCAGLKLLTAGQQVHCDAVKWG-LDLDTSVSNVLVKMYGECGAMSDYWKV 538
Query: 489 FDAMREKNTVTWSAMIGGYG-MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
F++M E + V+W+ M+G Q + +F++M+ + PN+V F +L+A S
Sbjct: 539 FNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALS 594
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 195/425 (45%), Gaps = 34/425 (8%)
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
D + +H E++K G D F+ LV+ YAK + ++ QVFDE ++N VSWT +++
Sbjct: 76 DANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVS 135
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEG---NQITLGSLVTAC--AKLRALHQGKWLHGYILK 274
GYV + A+E +F M G T G+L+ AC L +HG + K
Sbjct: 136 GYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSK 195
Query: 275 IGIEINSHLVTALLDMYVKC--GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
N+ + AL+ MY C G A+ VFD DL++W A++ Y + G
Sbjct: 196 TEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTF 255
Query: 333 KLFTDKKWAD----FFPNHVTIASVLS-ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINA 386
LF D + D P T S+++ AS G+ + V ++ G D V +A
Sbjct: 256 TLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSA 315
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------DDNVSPDA 430
LV +A+ + +A+ IF + +K+ + N +I GL + V +A
Sbjct: 316 LVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNA 375
Query: 431 VTLVSVISACA----SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
T V ++SA A S +++G +H + + GL + V L+N YAKCG +SA
Sbjct: 376 DTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESAS 435
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F M + ++W+ +I G+ ++ +S M + P+ + LS+C+
Sbjct: 436 KIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLK 495
Query: 547 MVGEG 551
++ G
Sbjct: 496 LLTAG 500
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 176/583 (30%), Positives = 302/583 (51%), Gaps = 58/583 (9%)
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLD 208
S +L +C +++ + EG ++H I+ +G +L LV Y+ + + + + +
Sbjct: 178 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 237
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+ W +I+ YV+N Q+ L + +M + + + T S++ AC + L GK +
Sbjct: 238 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 297
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H I I+ + + AL+ MY KCG + AR +FD++ D VSW +MI Y G
Sbjct: 298 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 357
Query: 329 DKALKLFTDKKWADFFPNHVTIASV----------------------------------- 353
++A +LF WA+ ++ I +
Sbjct: 358 NEAFELF-GSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALII 416
Query: 354 -LSASAQLGNLNMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEK 410
L A + +G+ +G+ +HS IR G D TV N+L+ MY++C + A +F+ K
Sbjct: 417 GLGACSHIGDAKLGKEIHSFAIRSCFGEVD-TVKNSLITMYSRCKDLKHAYLLFQLMEAK 475
Query: 411 DVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
+I+WNSIISG L + P+ VT+ SV+ CA + +Q G H
Sbjct: 476 SLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFH 535
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
Y T++ ++ + AL++ YA+ G AR VFD + E++ +T+++MI GYGMQG+G
Sbjct: 536 CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEG 595
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+L LF +M N +++P+ + +LSACSH+G+V +G F M + P ++H+ C
Sbjct: 596 QAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFAC 655
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
M DL RAG L +A E + NMP +P +++ + C ++ ++GE +K+LE+ P+
Sbjct: 656 MTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPEN 715
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YYVL++N+YA+ G W ++ +VR M+ G+ K+PGC+ VD+
Sbjct: 716 PGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDV 758
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 225/516 (43%), Gaps = 60/516 (11%)
Query: 51 PCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSM 106
P +LL C SL + H +I G KLV+ Y +F + A + ++
Sbjct: 176 PISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENS 235
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
+ + ++I Y N + + YK M K+ DNF + VLKAC E D+ G
Sbjct: 236 NILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGK 295
Query: 167 KVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+VH I S ++ L+ MY KC +G +R +FD+ +++ VSW SMI+ Y
Sbjct: 296 EVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMG 355
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSL--------------------------------- 252
E LF M +E N I ++
Sbjct: 356 MWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALI 415
Query: 253 --VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
+ AC+ + GK +H + ++ + +L+ MY +C +++ A +F + +
Sbjct: 416 IGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAK 475
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
L+SW ++I G ++A L + + PN+VTIASVL A++ NL G+ H
Sbjct: 476 SLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFH 535
Query: 371 S-LGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------ 422
+ R +D+ ++ NALVDMYA+ + +AR +F+ E+D + + S+I+G
Sbjct: 536 CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEG 595
Query: 423 -----------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+ + PD +T+++V+SAC+ G V G L L+ ++
Sbjct: 596 QAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFAC 655
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNT-VTWSAMIGG 506
+ + + + G A+ + M K T W+ +IG
Sbjct: 656 MTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGA 691
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/517 (22%), Positives = 212/517 (41%), Gaps = 105/517 (20%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
+ SL+++C +++L +G+ LHG+I+ +G E + LV L+ Y + DA + +
Sbjct: 177 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 236
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
+ W +I Y ++G+ KAL + P++ T SVL A + +L G+
Sbjct: 237 ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKE 296
Query: 369 VHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS------ 420
VH I +++I NAL+ MY KC + AR +F+ E+D ++WNS+IS
Sbjct: 297 VHE-SINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMG 355
Query: 421 ------GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTAL-- 472
L ++ + + L +I + G ++ G+ Y LLS G+ L
Sbjct: 356 MWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGN----YKGALELLSQMRKXGSHLDS 411
Query: 473 ------LNFYAKCGDAQSARMVFD-AMR----EKNTV----------------------- 498
L + GDA+ + + A+R E +TV
Sbjct: 412 VALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQL 471
Query: 499 -------TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV--G 549
+W+++I G + L +ML ++PN V ++L C+ + G
Sbjct: 472 MEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHG 531
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA---------------------- 587
+ + C+ + DFK + + +VD+ AR+G++ EA
Sbjct: 532 KEFHCYMTRREDFK--DHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGY 589
Query: 588 ------------LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH--PDK 633
E M N I+PD A L C G+++ +KM L+
Sbjct: 590 GMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPH 649
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
++ +++L+ GR +N+ +E+++ +P
Sbjct: 650 LEHFACMTDLF---GRAGLLNKAKEIIRNMPYKPTPA 683
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/588 (30%), Positives = 307/588 (52%), Gaps = 23/588 (3%)
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
D ++ + W+ + V+ + M D F +L L ++ G ++H
Sbjct: 870 DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIH 929
Query: 170 CEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
+V+ G D V G L++MY K + +R VF + + ++VSW +MI+G +
Sbjct: 930 GIVVR-SGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLE 988
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA-LHQGKWLHGYILKIGIEINSHLVTA 286
+ + +F + G + +Q T+ S++ AC+ L H +H +K G+ ++S + T
Sbjct: 989 ECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTT 1048
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+D+Y K G + +A +F DL SW AM+ GY SG KAL+L+ + + N
Sbjct: 1049 LIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERAN 1108
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
+T+A+ A+ L L G+ + ++ ++ G D VI+ ++DMY KC + AR IF
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
D +AW ++ISG +N V PD T +++ AC+ L A++
Sbjct: 1169 EIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQ 1228
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +HA + K + + +V T+L++ YAKCG+ + AR +F +W+AMI G
Sbjct: 1229 GRQIHANTVKLNC-AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLA 1287
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G+ +L F +M + V P+ V F +LSACSH+G+V E ++ FYSM + + P +
Sbjct: 1288 QHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEI 1347
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY C+VD L+RAGR+ EA + + +MP E S++ L+ C + + G+ + +K+L
Sbjct: 1348 EHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLA 1407
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L P + YVL+SN+YA+ +W V R +M++ + K PG S VDL
Sbjct: 1408 LEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDL 1455
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 168/680 (24%), Positives = 294/680 (43%), Gaps = 96/680 (14%)
Query: 42 ASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYAR 100
A+ H+L P + L S + ++ H + GL D LV++Y FG ++ AR
Sbjct: 725 ATRHTLA--PVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREAR 782
Query: 101 SVFDSMPNPDFYSFQVMIRWYFLNDL-YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
+FD M D + VM++ Y L Y+ ++ F + R L+ D + C
Sbjct: 783 VLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDD-------VTLCTLA 835
Query: 160 RDIDEGMKV---HCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
R + V + +K G F MY + +V++W
Sbjct: 836 RVVKSKQNVLEWQLKQLKAYGTKLF-------MYDD------------DDDGSDVIAWNK 876
Query: 217 MIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG 276
++ ++Q E + F M V + +T +++ A L L GK +HG +++ G
Sbjct: 877 TLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSG 936
Query: 277 IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
++ + L++MYVK G++ AR+VF ++ +DLVSW MI G SG + ++ +F
Sbjct: 937 LDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFV 996
Query: 337 DKKWADFFPNHVTIASVLSASAQL-GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
D P+ T+ASVL A + L G ++ +H+ ++ G+ D V L+D+Y+K
Sbjct: 997 DLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKS 1056
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVI 437
+ +A ++F D+ +WN+++ G + + +TL +
Sbjct: 1057 GKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAA 1116
Query: 438 SACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNT 497
A L ++ G + A K+G + +++V + +L+ Y KCG+ +SAR +F+ + +
Sbjct: 1117 KAAGGLVGLKQGKQIQAVVVKRG-FNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDD 1175
Query: 498 VTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC--- 554
V W+ MI G G +L + M +VQP+E F T++ ACS + +G +
Sbjct: 1176 VAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHAN 1235
Query: 555 ------------------FYSMCRD-------FKFVPSMK--HYVCMVDLLARAGRLEEA 587
Y+ C + FK + + + M+ LA+ G EEA
Sbjct: 1236 TVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEA 1295
Query: 588 LEFMENMP---IEPDVSLFGAFLHGC---GLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
L+F E M + PD F L C GL S ++K+ + P+ Y LV
Sbjct: 1296 LQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVD 1355
Query: 642 NLYASDGRWIRVNQVRELMK 661
L R ++RE K
Sbjct: 1356 ALS-------RAGRIREAEK 1368
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 221/478 (46%), Gaps = 46/478 (9%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLD-- 208
+L+ D+ G + H I+ G PD F+ L+ MY+KC + S+R++FD T D
Sbjct: 632 ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS 691
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+++V+W ++++ + D A++G LF +R FV + TL + C + + L
Sbjct: 692 RDLVTWNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESL 749
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
HGY +KIG++ + + AL+++Y K G IR+AR +FD + D+V W M+ Y +G
Sbjct: 750 HGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLE 809
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALV 388
+AL LF++ P+ VT+ ++ N+ + L+ +
Sbjct: 810 YEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNV----------LEWQLKQLKAYGTKL 859
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAV 431
MY DVIAWN +S ++ V+ D +
Sbjct: 860 FMYDD------------DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGL 907
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
T V ++S A L +++G +H + G L V VG L+N Y K G AR VF
Sbjct: 908 TFVVMLSVVAGLNCLELGKQIHGIVVRSG-LDQVVSVGNCLINMYVKTGSVSRARTVFWQ 966
Query: 492 MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
M E + V+W+ MI G + G S+ +F D+L + P++ ++L ACS G
Sbjct: 967 MNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHL 1026
Query: 552 WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
++ V ++D+ +++G++EEA EF+ D++ + A +HG
Sbjct: 1027 ATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA-EFLFVNQDGFDLASWNAMMHG 1083
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 172/687 (25%), Positives = 293/687 (42%), Gaps = 79/687 (11%)
Query: 10 HVSRTKKPKL-QLRFFSYT---NQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSL 65
H + KP L LR + T N P H + HS+P + + S L
Sbjct: 592 HQKKGWKPALMHLRLRAATSTANPFIPPAHLI-------HSIPQWFSILRHAIAASDLPL 644
Query: 66 -KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP--DFYSFQVMIRWY 121
K HA ++ G D+ L++MY G + AR +FD+ P+ D ++ ++ +
Sbjct: 645 GKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSAH 704
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DS 180
D +D ++ +R+ + V K C +H VK+G D
Sbjct: 705 --ADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDV 762
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
FV LV++YAK I +R +FD ++VV W M+ YV E L+LF+
Sbjct: 763 FVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRT 822
Query: 241 FVEGNQITLGSLVTAC-AKLRALH-QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ + +TL +L +K L Q K L Y K L MY
Sbjct: 823 GLRPDDVTLCTLARVVKSKQNVLEWQLKQLKAYGTK-------------LFMYDD----- 864
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
+ D+++W + + Q G +A+ F D + + +T +LS A
Sbjct: 865 -------DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVA 917
Query: 359 QLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
L L +G+ +H + +R GL+ +V N L++MY K ++ AR +F +E D+++WN+
Sbjct: 918 GLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNT 977
Query: 418 IISG-----------------LDDNVSPDAVTLVSVISACASL-GAVQVGSSLHAYSTKQ 459
+ISG L + PD T+ SV+ AC+SL G + + +HA + K
Sbjct: 978 MISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKA 1037
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G++ + +V T L++ Y+K G + A +F + +W+AM+ GY + GD +L L
Sbjct: 1038 GVVLDS-FVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRL 1096
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVG-EGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
+ M + N++ A G+VG + K ++ F + ++D+
Sbjct: 1097 YILMQESGERANQITLANAAKAAG--GLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMY 1154
Query: 579 ARAGRLEEALEFMENMPIEPDVS----LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
+ G +E A +P DV+ + G +G ++ F + + K + PD+
Sbjct: 1155 LKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSK---VQPDEY 1211
Query: 635 CYYVLV---SNLYA-SDGRWIRVNQVR 657
+ LV S L A GR I N V+
Sbjct: 1212 TFATLVKACSLLTALEQGRQIHANTVK 1238
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 130/269 (48%), Gaps = 19/269 (7%)
Query: 53 LNLLGLCKSTGSL------KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDS 105
+ L K+ G L K A+++ G D + ++ MY G ++ AR +F+
Sbjct: 1110 ITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNE 1169
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+P+PD ++ MI N + + Y MR + D + F+ ++KAC L +++G
Sbjct: 1170 IPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQG 1229
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
++H VK+ D FV+T LVDMYAKC +I +R +F T + SW +MI G Q+
Sbjct: 1230 RQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQH 1289
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY-----ILKI-GIE 278
A+E L F M+ V +++T +++AC+ H G Y + KI GIE
Sbjct: 1290 GNAEEALQFFEEMKSRGVTPDRVTFIGVLSACS-----HSGLVSEAYENFYSMQKIYGIE 1344
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDEL 307
+ L+D + G IR+A V +
Sbjct: 1345 PEIEHYSCLVDALSRAGRIREAEKVISSM 1373
>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Glycine max]
Length = 895
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 190/617 (30%), Positives = 324/617 (52%), Gaps = 33/617 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ L+ MY G+ A VF+++ +PD S+ ++ + + D + F + M
Sbjct: 115 SNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGF---EESVDALNFARSMHYCGI 171
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D ++ L C G ++H +VK G G + F+ LV MY++ + +R+
Sbjct: 172 AFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARR 231
Query: 202 VFDETLDKNVVSWTSMIAGYVQN-DC-AQEGLVLF-NRMREGFVEGNQITLGSLVTACAK 258
VFDE ++++VSW +MI+GY Q C E ++LF N +R G + + ++L V+AC
Sbjct: 232 VFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLI-DHVSLTGAVSACGH 290
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
++ L G+ +HG K+G + + L+ Y KC +DA++VF+ + + ++VSWT M
Sbjct: 291 MKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTM 350
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LG 377
I S + A+ LF + +PN VT ++ A + G +H L I+
Sbjct: 351 I-----SIDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCF 405
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
L + TV N+ + MYAK I ++ IFE + ++ ++WN++ISG N
Sbjct: 406 LSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALLTYLS 465
Query: 426 ----VSPDAVTLVSVISACASLGAVQV--GSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ P+ T SV++A A+ + + G S H++ K GL + + G ALL+ Y K
Sbjct: 466 AVKEIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSG-ALLDMYGKR 524
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
GD ++ VF+ E+ W+A+I Y GD ++L+++M E + P+ + F ++L
Sbjct: 525 GDIIESQRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEMEREGINPDSITFLSVL 584
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
+AC GMV G + F SM + P+ +HY MVD+L R GRL+EA E M +P P
Sbjct: 585 AACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPG 644
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
+S+ + L C L+ ++ E ++ +++E+ P + YVL++NLYA G+W +V +VR
Sbjct: 645 LSVLQSLLGSCRLHGNMEMAEKVVGRLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRG 704
Query: 660 MKQRGLSKSPGCSLVDL 676
M+ RG+ K G S VD+
Sbjct: 705 MRGRGVKKEVGFSWVDV 721
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/552 (32%), Positives = 302/552 (54%), Gaps = 23/552 (4%)
Query: 143 EHDNF-VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSR 200
E NF +AC L + EG +H +VK G S V+ + L+ MY+KC + +
Sbjct: 563 ERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAH 622
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+ F E L+K+++SWTSMI+ Y + A E + +F M + + I + ++++ +
Sbjct: 623 RSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSM 682
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ + K HG I++ ++ + ALL MY K G ++ A F + + +W M+
Sbjct: 683 RVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVS 742
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LGLE 379
GY + G K + LF + + + ++ SV+S+ +QLG ++ R +H I+ L E
Sbjct: 743 GYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDE 802
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD---------------- 423
+ +V N+L+DMY K + AR IF +D++ WN++IS
Sbjct: 803 NVSVNNSLIDMYGKSGNLTIARRIF-CRIPRDIVTWNTLISSYAHCGHFAEALSLYDKMV 861
Query: 424 -DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+++ P++ TLV V+SAC+ L +++ G +H Y G N+ + TAL++ YAKCG
Sbjct: 862 LEDLKPNSATLVXVLSACSHLASLEEGEKVHNY-INGGKFEFNLSIATALIDMYAKCGQL 920
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ +R +F++M E++ +TW+ MI GYGM GD ++ F M +PN + F +LSAC
Sbjct: 921 EKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSAC 980
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H G+V EG K + +D+ P++KHY CMVDLL R+G L+EA + +MPI PD +
Sbjct: 981 AHAGLVKEG-KYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGV 1039
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L C +++ ++G + K + + YYV++SN+Y+S G+W + R +MK+
Sbjct: 1040 WGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYVMISNMYSSIGKWEEAEKARGIMKE 1099
Query: 663 RGLSKSPGCSLV 674
RG+ K G S V
Sbjct: 1100 RGVRKKTGWSAV 1111
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 215/423 (50%), Gaps = 24/423 (5%)
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+NV W + G ++ E L +R+ N TL AC L AL +G+ L
Sbjct: 532 RNVEFWRRHMNG--ESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCL 589
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
HG ++K G++ + + ++LL MY KCGN +A F E+ + D++SWT+MI Y++ G+
Sbjct: 590 HGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWA 649
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINAL 387
+ + +F + + +P+ + I+ +LS+ + + + H L IR D V NAL
Sbjct: 650 TECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNAL 709
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-----------------NVSPDA 430
+ MY K + A F +E++ AWN ++SG + D+
Sbjct: 710 LSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDS 769
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
+LVSV+S+C+ LGA + S+H Y K L+ NV V +L++ Y K G+ AR +F
Sbjct: 770 NSLVSVVSSCSQLGATHLARSIHCYMIKN-LMDENVSVNNSLIDMYGKSGNLTIARRIFC 828
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
+ ++ VTW+ +I Y G +L+L+ M+ E+++PN +LSACSH + E
Sbjct: 829 RI-PRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEE 887
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
G K ++ KF ++ ++D+ A+ G+LE++ E +M E DV + + G
Sbjct: 888 GEK-VHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMH-ERDVITWNVMISGY 945
Query: 611 GLY 613
G++
Sbjct: 946 GMH 948
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 126/460 (27%), Positives = 219/460 (47%), Gaps = 31/460 (6%)
Query: 59 CKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C + G+L + H L++ G+ + + L+SMY G+ + A F + N D S+
Sbjct: 577 CGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISW 636
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MI Y + ++ + M D V S +L + + E H I++
Sbjct: 637 TSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIR 696
Query: 175 VGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVL 233
D V L+ MY K + + + F ++N +W M++GY + + + L
Sbjct: 697 RHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGL 756
Query: 234 FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
F M+ +E + +L S+V++C++L A H + +H Y++K ++ N + +L+DMY K
Sbjct: 757 FREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGK 816
Query: 294 CGNIRDARSVFDELCSI--DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
GN+ AR +F C I D+V+W +I Y G+ +AL L+ D PN T+
Sbjct: 817 SGNLTIARRIF---CRIPRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLV 873
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLEDY--TVINALVDMYAKCHVIADARYIFETTSE 409
VLSA + L +L G VH+ I G ++ ++ AL+DMYAKC + +R IF + E
Sbjct: 874 XVLSACSHLASLEEGEKVHNY-INGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHE 932
Query: 410 KDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSL 452
+DVI WN +ISG + + P+ +T ++V+SACA G V+ G L
Sbjct: 933 RDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYL 992
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ ++ N+ +++ + G+ Q A + +M
Sbjct: 993 FG-KMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSM 1031
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/449 (25%), Positives = 211/449 (46%), Gaps = 36/449 (8%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
KAFH L+I T D+ L+SMY FG +K A F + +F ++ +M+ Y
Sbjct: 688 KAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKI 747
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVL 183
L + ++ M+ E D+ V+ +C +L +HC ++K + + V
Sbjct: 748 GLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVN 807
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+DMY K ++ +R++F + +++V+W ++I+ Y E L L+++M ++
Sbjct: 808 NSLIDMYGKSGNLTIARRIFCR-IPRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLK 866
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
N TL +++AC+ L +L +G+ +H YI E N + TAL+DMY KCG + +R +
Sbjct: 867 PNSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREI 926
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+ + D+++W MI GY G A++ F + + PN +T +VLSA A G +
Sbjct: 927 FNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLV 986
Query: 364 NMGRMVHSLGIRLGLEDYTVINAL------VDMYAKCHVIADARYIFETTSEKDVIAWNS 417
G+ + ++DY+V L VD+ + + +A +
Sbjct: 987 KEGKYLFG-----KMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALV------------- 1028
Query: 418 IISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
L +SPD +++S+C +++G + ++ + + YV + N Y+
Sbjct: 1029 ----LSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYV--MISNMYS 1082
Query: 478 KCG---DAQSARMVFDAMREKNTVTWSAM 503
G +A+ AR + + WSA+
Sbjct: 1083 SIGKWEEAEKARGIMKERGVRKKTGWSAV 1111
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 198/622 (31%), Positives = 329/622 (52%), Gaps = 32/622 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ LV+ + +G + A+ +F M + + + ++ ++ + +K M K L E
Sbjct: 390 SALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM-KDLVE 448
Query: 144 HDNFVFSKVLKACCELRDIDEGMK----VHCEIVKVGGPDSFVLTG--LVDMYAKCRDIG 197
++ +L E ++ EG + VH + + G D+ + G LV+MY KC I
Sbjct: 449 INSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAID 508
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTAC 256
++ VF K+ VSW SMI+G N+ +E + F+ M R G V N ++ S +++C
Sbjct: 509 NACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSN-FSVISTLSSC 567
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ L L G+ +HG K G++++ + ALL +Y + +I + + VF ++ D VSW
Sbjct: 568 SSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWN 627
Query: 317 AMIVGYTQ-SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+ I + +ALK F + A + PN VT ++L+A + L +G +H+L ++
Sbjct: 628 SFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILK 687
Query: 376 LGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISGL---------DD 424
+ D I NAL+ Y KC + D IF SE+ D ++WNS+ISG D
Sbjct: 688 YSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMD 747
Query: 425 NVSP--------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
V P D T +V+SACAS+ ++ G +HA + + L S+V VG+AL++ Y
Sbjct: 748 LVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVR-ACLESDVVVGSALVDMY 806
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG A F+ M +N +W++MI GY G G +L +F+ M P+ V F
Sbjct: 807 AKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFV 866
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+LSACSH G+V EG+K F SM + P ++H+ CMVDLL RAG +++ +F++ MP+
Sbjct: 867 GVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPM 926
Query: 597 EPDVSLFGAFLHGCGLYS--RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
+P++ ++ L C + +LG+ K ++EL P A YVL+SN++A+ G W V
Sbjct: 927 DPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVV 986
Query: 655 QVRELMKQRGLSKSPGCSLVDL 676
+ R M++ + K GCS V++
Sbjct: 987 EARLAMRKAAVKKDAGCSWVNM 1008
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 166/583 (28%), Positives = 276/583 (47%), Gaps = 56/583 (9%)
Query: 6 LLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSL 65
L R +++ LR +++++ Q +LD F + + S+ N L
Sbjct: 115 LFMRLLNKYNSTYTFLRHYTFSHSQL---QQLDSEFDRYKTSSSLYDANHL--------- 162
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
H L G T+D CNT L+++Y G++ AR +FD MP + S+ +I Y
Sbjct: 163 ---HLQLYKTGFTDDVFFCNT-LINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQ 218
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC--CELRDIDEGMKVHCEIVKVGGPDSF 181
N + + +K + ++F L+AC C I GM++H I K+
Sbjct: 219 NRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDM 278
Query: 182 VLTG-LVDMYAKCR-DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
+L+ L+ MY+ C I + +VFDE +N V+W S+I+ Y + A LF+ M+
Sbjct: 279 ILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQM 338
Query: 240 GFVE----GNQITLGSLVTACAKLR--ALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
VE N+ TL SLVTA L L + + I K G + ++ +AL++ + +
Sbjct: 339 EGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFAR 398
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP-NHVTIAS 352
G + A+ +F ++ + V+ ++VG + ++A K+F + K D N ++
Sbjct: 399 YGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK--DLVEINSESLVV 456
Query: 353 VLSASAQLGNLNMGRM----VHSLGIRLGLED--YTVINALVDMYAKCHVIADARYIFET 406
+LS + NL G+ VH+ R GL D ++ NALV+MY KC I +A +F+
Sbjct: 457 LLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQL 516
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
KD ++WNS+ISGLD N + P +++S +S+C+SLG + +G
Sbjct: 517 MPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 576
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG- 508
+H K G L +V V ALL YA+ + VF M E + V+W++ IG
Sbjct: 577 RQIHGEGFKWG-LDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAK 635
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG 551
+ +L F +M+ +PN V F IL+A S ++G G
Sbjct: 636 YEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLG 678
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 206/424 (48%), Gaps = 38/424 (8%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H ++ K G D F L+++Y + ++ S+R++FDE KN+VSW+ +I+GY QN
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRM 221
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKL--RALHQGKWLHGYILKIGIEINSHLV 284
E LF + + N +GS + AC + + G +H +I K+ + L
Sbjct: 222 PDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILS 281
Query: 285 TALLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA-- 341
L+ MY C G+I DA VFDE+ + V+W ++I Y + G A KLF+ +
Sbjct: 282 NVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGV 341
Query: 342 --DFFPNHVTIASVLSASAQLGNLN---MGRMVHSLGIRLGLEDYTVINALVDMYAKCHV 396
+ PN T+ S+++A+ L + + +M+ + L D V +ALV+ +A+ +
Sbjct: 342 ELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401
Query: 397 IADARYIFETTSEKDVIAWNSIISGL----------------DDNVSPDAVTLVSVISAC 440
+ A+ IF+ +++ + N ++ GL D V ++ +LV ++S
Sbjct: 402 MDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTF 461
Query: 441 ASLGAVQ----VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
++ G +HAY + GL+ + + +G AL+N Y KC +A VF M K+
Sbjct: 462 TEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKD 521
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV-------G 549
TV+W++MI G +++ F M + P+ + LS+CS G + G
Sbjct: 522 TVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHG 581
Query: 550 EGWK 553
EG+K
Sbjct: 582 EGFK 585
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 298/548 (54%), Gaps = 23/548 (4%)
Query: 151 KVLKACCELRDIDEGMKVHCEIVKV--GGPDSFV-LTGLVDMYAKCRDIGSSRQVFDETL 207
K+LK + +++ G +H ++ +S + + L++ YAK + + +FD
Sbjct: 34 KLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMP 93
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGK 266
++NVVSW++++ GY+ N + + + L M EG V N+ L +++C + +G+
Sbjct: 94 ERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGR 153
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
HG +LK G ++++ AL+ MY KC ++DA V++E+ D+V++ +++ ++G
Sbjct: 154 QCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENG 213
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN 385
Y + L++ + VT + S A L +L +G VH + +E D V +
Sbjct: 214 YLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSS 273
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSP 428
A+++MY KC AR +F+ ++V+ W ++++ +NV
Sbjct: 274 AIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKS 333
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
+ T +++ACA L A + GS LH +S K G +V VG AL+N YAK GD ++A+ V
Sbjct: 334 NEFTYAVLLNACAGLSARRNGSLLHGHSEKSGF-KHHVMVGNALINMYAKSGDIEAAKKV 392
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV 548
F M ++ +TW+AMI G+ G G +L +F DML E PN V FT +LSAC H G+V
Sbjct: 393 FSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLV 452
Query: 549 GEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLH 608
EG+ + + + F P ++HY C+V LL++ G+L EA FM P++ DV + L+
Sbjct: 453 QEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLN 512
Query: 609 GCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS 668
C ++ + LG + + +LE+ P+ Y L+SN+YA + RW V +VR+LM+ + + K
Sbjct: 513 ACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKE 572
Query: 669 PGCSLVDL 676
PG S +++
Sbjct: 573 PGVSWIEI 580
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 250/522 (47%), Gaps = 31/522 (5%)
Query: 48 PSIPC--LNLLGLCKSTGSLK---AFHALLIVDGLTNDKCNTK---LVSMYGSFGHVKYA 99
PS P + LL L T +LK H+ LIV + + L++ Y V A
Sbjct: 26 PSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIA 85
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN-FVFSKVLKACCE 158
++FD MP + S+ ++ Y LN ++ K M N ++ + + +CC+
Sbjct: 86 HNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCD 145
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
++EG + H ++K G ++V LV MY+KC + + V++E ++V++ S+
Sbjct: 146 RGRVEEGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSI 205
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
++ V+N +EGL + M V+ +++T + + CA L+ L G +HG +L +
Sbjct: 206 LSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDV 265
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
E ++++ +A+++MY KCG AR VFD L S ++V WTA++ Q+G ++AL LF+
Sbjct: 266 ECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSK 325
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHV 396
+ + N T A +L+A A L G ++H + G + + ++ NAL++MYAK
Sbjct: 326 MEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGD 385
Query: 397 IADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISA 439
I A+ +F +D+I WN++I G L P+ VT V+SA
Sbjct: 386 IEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSA 445
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTV 498
C LG VQ G + KQ + + T +++ +K G AR K + V
Sbjct: 446 CGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVV 505
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
W ++ + + G L + E+ PN+V T+LS
Sbjct: 506 AWRTLLNACHVHQNYG--LGRWVAEFVLEMDPNDVGTYTLLS 545
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 310/629 (49%), Gaps = 28/629 (4%)
Query: 72 LIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDI 130
+IV GL N L++M+G+ G V A +FD M D S+ MI Y +
Sbjct: 171 VIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKC 230
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDM 189
+ MR D ++ C G +H ++ S V+ LV+M
Sbjct: 231 FLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNM 290
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y+ + + +F ++++SW +MI+ YVQN + + L ++ N +T
Sbjct: 291 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTF 350
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
S + AC+ AL GK +H +L++ ++ N + +L+ MY KC ++ DA VF + +
Sbjct: 351 SSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 410
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL-NMGRM 368
D+VS+ +I GY KA+++F+ + A PN++T+ ++ + A +L N GR
Sbjct: 411 HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 470
Query: 369 VHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS 427
+H+ IR G L D V N+L+ MYAKC + + IF + + K++++WN+II+ NV
Sbjct: 471 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA---NVQ 527
Query: 428 P--------------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
D V L +S+CASL +++ G LH K GL S+ Y
Sbjct: 528 LGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGL-DSDSY 586
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V A ++ Y KCG V + W+ +I GY G + F M+
Sbjct: 587 VVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATG 646
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+P+ V F +LSACSH G+V +G + SM F P +KH VC+VDLL R GR EA
Sbjct: 647 RKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEA 706
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
+F+E MP+ P+ ++ + L + ++G KK+LEL P YVL+SNLYA++
Sbjct: 707 EKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATN 766
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
RW V+++R MK ++K P CS + L
Sbjct: 767 ARWADVDKLRSHMKTININKRPACSWLKL 795
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 289/600 (48%), Gaps = 30/600 (5%)
Query: 67 AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
A HAL GL N T L+ +YGS G V A+ +F MP + S+ ++ N
Sbjct: 65 AIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNG 124
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLT 184
++ + Y+ MR+ + F+ V+ C L + G++V +++ G + V
Sbjct: 125 YLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVAN 184
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ M+ + + ++FD + + +SW +MI+ Y + ++F+ MR +
Sbjct: 185 SLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP 244
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ TL SL++ CA G +H L+ ++ + ++ AL++MY G + DA +F
Sbjct: 245 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ DL+SW MI Y Q+ ALK + PNH+T +S L A + G L
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 364
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-- 421
G+MVH++ ++L L+ + V N+L+ MY KC+ + DA +F++ D++++N +I G
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 424
Query: 422 -LDD--------------NVSPDAVTLVSVISACASLGAVQ-VGSSLHAYSTKQGLLSSN 465
L+D + P+ +T++++ + AS + G LHAY + G LS
Sbjct: 425 VLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDE 484
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
YV +L+ YAKCG+ +S+ +F+++ KN V+W+A+I G G +L LF DM +
Sbjct: 485 -YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQH 543
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGR 583
+ + V LS+C+ + EG + + + K YV +D+ + G+
Sbjct: 544 AGNKLDRVCLAECLSSCASLASLEEGMQ-LHGL--GMKSGLDSDSYVVNAAMDMYGKCGK 600
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL--HPDKACYYVLVS 641
++E L+ + + I P + + G Y F E K+M+ PD + L+S
Sbjct: 601 MDEMLQVVPDQAIRPQ-QCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLS 659
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 214/430 (49%), Gaps = 25/430 (5%)
Query: 132 EFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK----VHCEIVKVG-GPDSFVLTGL 186
E + MR+R F + ++ AC E R DEG+ +H + G + ++ T L
Sbjct: 27 EMLRGMRERGVPLSGFALASLVTAC-ERRGRDEGIACGAAIHALTHRAGLMGNVYIGTAL 85
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ +Y + ++++F E ++NVVSWT+++ N +E L + +MR V N
Sbjct: 86 LHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNA 145
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++V+ C L G + ++ G++ + +L+ M+ G + DA +FD
Sbjct: 146 NAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDR 205
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D +SW AMI Y+ G K +F+D + P+ T+ S++S A + + G
Sbjct: 206 MEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHG 265
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
+HSL +R L+ TVINALV+MY+ ++DA ++F S +D+I+WN++IS
Sbjct: 266 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQN 325
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
N SP+ +T S + AC+S GA+ G +HA Q L N+ V
Sbjct: 326 CNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAI-VLQLSLQRNLLV 384
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
G +L+ Y KC + A VF +M + V+++ +IGGY + DG ++ +FS M + +
Sbjct: 385 GNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGI 444
Query: 529 QPNEVIFTTI 538
+PN + I
Sbjct: 445 KPNYITMINI 454
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 200/417 (47%), Gaps = 27/417 (6%)
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLV--LFNRMREGFVEGNQITLGSLVTACAKL---RAL 262
D+ +W + ++G V+ C ++G + MRE V + L SLVTAC + +
Sbjct: 3 DRTPSTWYTAVSGCVR--CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G +H + G+ N ++ TALL +Y G + DA+ +F E+ ++VSWTA++V
Sbjct: 61 ACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVAL 120
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY- 381
+ +GY ++AL+ + + N A+V+S L N G V S I GL++
Sbjct: 121 SSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQV 180
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GL------------DD 424
+V N+L+ M+ + DA +F+ E D I+WN++IS G+
Sbjct: 181 SVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ PDA TL S++S CAS GS +H+ + L SS V V AL+N Y+ G
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSS-VTVINALVNMYSAAGKLSD 299
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A +F M ++ ++W+ MI Y + +L + + PN + F++ L ACS
Sbjct: 300 AEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSS 359
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
G + +G K +++ ++ ++ + + +E+A + ++MP VS
Sbjct: 360 PGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS 415
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/612 (30%), Positives = 316/612 (51%), Gaps = 27/612 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T L+++Y G V A+ +FD MP D + +I Y N D + + M ++
Sbjct: 88 KTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGF 147
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
+L C + + +G VH K G DS V L+ Y+KC ++GS+
Sbjct: 148 SPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV 207
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F E DK+ VSW +MI Y Q+ +E + +F M E VE + +T+ +L++A
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA----HV 263
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
H+ LH ++K G+ + +VT+L+ Y +CG + A ++ +V T+++
Sbjct: 264 SHEP--LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSC 321
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Y + G D A+ F+ + + V + +L + ++++G +H I+ GL
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTK 381
Query: 382 T-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------------L 422
T V+N L+ MY+K + ++FE E +I+WNS+ISG L
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ PDA+T+ S+++ C+ L + +G LH Y+ + + N +V TAL++ YAKCG+
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENEN-FVCTALIDMYAKCGNE 500
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A VF +++ T TW++MI GY + G +L+ + +M + ++P+E+ F +LSAC
Sbjct: 501 VQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H G V EG CF +M ++F P+++HY MV LL RA EAL + M I+PD ++
Sbjct: 561 NHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAV 620
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L C ++ ++GE + +KM L YVL+SNLYA++ W V +VR +MK
Sbjct: 621 WGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Query: 663 RGLSKSPGCSLV 674
G G S +
Sbjct: 681 NGYDGYLGVSQI 692
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/523 (24%), Positives = 251/523 (47%), Gaps = 48/523 (9%)
Query: 177 GPDSFVL--TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
G D FV T L+++Y K + S++ +FDE +++ V W ++I GY +N + LF
Sbjct: 80 GLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLF 139
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
M + + TL +L+ C + + QG+ +HG K G+E++S + AL+ Y KC
Sbjct: 140 IVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKC 199
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+ A +F E+ VSW MI Y+QSG ++A+ +F + + + VTI ++L
Sbjct: 200 AELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL 259
Query: 355 SASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVI 413
SA L H L ++ G+ D +V+ +LV Y++C + A ++ + + ++
Sbjct: 260 SAHVSHEPL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIV 313
Query: 414 AWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
SI+S + + DAV LV ++ C + +G SLH Y+
Sbjct: 314 GLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYA 373
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K GL + + V L+ Y+K D ++ +F+ ++E ++W+++I G G +
Sbjct: 374 IKSGLCTKTLVV-NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTA 432
Query: 517 LALFSD-MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVC- 573
+F ML + P+ + ++L+ CS + G + Y++ +F+ +++VC
Sbjct: 433 FEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE----NENFVCT 488
Query: 574 -MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE---- 628
++D+ A+ G +A +++ P + + + + G YS L + LE
Sbjct: 489 ALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISG---YSLSGLQHRALSCYLEMREK 544
Query: 629 -LHPDKACYYVLVSNLYASDGRWIRVNQV--RELMKQRGLSKS 668
L PD+ + ++S + G ++ ++ R ++K+ G+S +
Sbjct: 545 GLKPDEITFLGVLSA--CNHGGFVDEGKICFRAMIKEFGISPT 585
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 225/486 (46%), Gaps = 54/486 (11%)
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA------KL 259
TL +++ + S++ + + + + +F + + N T+ + A KL
Sbjct: 8 TLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKL 67
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
Q + + ++ K G++ ++ T+LL++Y+K G + A+ +FDE+ D V W A+I
Sbjct: 68 ----QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALI 123
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY+++GY A KLF F P+ T+ ++L Q G ++ GR VH + + GLE
Sbjct: 124 CGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLE 183
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII-----SGLDD--------- 424
D V NAL+ Y+KC + A +F +K ++WN++I SGL +
Sbjct: 184 LDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM 243
Query: 425 ---NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
NV VT+++++SA S LH K G++ +++ V T+L+ Y++CG
Sbjct: 244 FEKNVEISPVTIINLLSAHVS------HEPLHCLVVKCGMV-NDISVVTSLVCAYSRCGC 296
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
SA ++ + ++ + V ++++ Y +GD ++ FS ++ + V IL
Sbjct: 297 LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHG 356
Query: 542 C---SH--TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
C SH GM G+ +C V ++ + ++ +E L E +
Sbjct: 357 CKKSSHIDIGMSLHGYAIKSGLCTKTLVVNG------LITMYSKFDDVETVLFLFEQLQE 410
Query: 597 EPDVSLFGAFLHGCGLYSRFDLG-EVMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRV 653
P +S + + + GC R EV + ML L PD + +++L A + +
Sbjct: 411 TPLIS-WNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDA----ITIASLLAGCSQLCCL 465
Query: 654 NQVREL 659
N +EL
Sbjct: 466 NLGKEL 471
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/561 (32%), Positives = 302/561 (53%), Gaps = 63/561 (11%)
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYA-KCRDIGSSR 200
++ N+ L++C D+ K+H +++ G D+F+ T V+ YA R+I +
Sbjct: 24 KNSNYKTLSALQSCKSTEDLK---KIHAQLIITGQIKDTFIATKTVESYAVSARNIDYAF 80
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
VF + SWT+MI G+V+ ++ L + MR+ VE N+ T ++ A
Sbjct: 81 WVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRP 140
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ +G+ +HG ++K+G + AL+ MY+KCG+I DA +FDE+ + ++V+W MI
Sbjct: 141 SYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMIT 200
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
G G ++A +LF ++ N+G
Sbjct: 201 GCFGCGDTERARRLF----------------------GEMPERNVGSW------------ 226
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
NA+V Y+K + AR +F+ E+DV++W S+IS N
Sbjct: 227 ----NAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMML 282
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
VS D++ + S++SACA +GA+ +G +HAY K+ L ++V++ TAL++ YAKCG
Sbjct: 283 AGVSADSIIITSILSACAQIGALDMGRWIHAY-MKRSKLRNDVFLDTALVDMYAKCGCID 341
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+A VF+ M KN +W+AM+ G + G G +L LF M + V PN++ F +LSACS
Sbjct: 342 TAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACS 401
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G V EGWK F M ++F P ++HY CMVD+L R G + EA E + MP+EP+V ++
Sbjct: 402 HIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIW 461
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
GA L+ C ++ ++GE ++ + +L + YVL+SN++A+ +W V + R++MKQ
Sbjct: 462 GALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQM 521
Query: 664 GLSKS-PGCSLVDLD-IANDF 682
G+ K PG S ++LD + +DF
Sbjct: 522 GVEKKIPGYSSIELDSVVHDF 542
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 213/493 (43%), Gaps = 85/493 (17%)
Query: 17 PKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDG 76
P + L F S+ Q T + +++ +L ++ CKST LK HA LI+ G
Sbjct: 2 PHIPL-FSSFWRQITTVTTKFKSKNSNYKTLSALQS------CKSTEDLKKIHAQLIITG 54
Query: 77 LTNDK-CNTKLVSMYG-SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFY 134
D TK V Y S ++ YA VF + PD YS+ MIR + + +EFY
Sbjct: 55 QIKDTFIATKTVESYAVSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFY 114
Query: 135 KCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC 193
MR+R E + F F VLKA EG VH ++VKVG D F L+ MY KC
Sbjct: 115 GLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVFTRNALIHMYLKC 174
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV----------- 242
I + +FDE + NVV+W +MI G + LF M E V
Sbjct: 175 GSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYS 234
Query: 243 ----------------EGNQITLGSLVT-------------------------------- 254
E + ++ GS+++
Sbjct: 235 KLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITS 294
Query: 255 ---ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
ACA++ AL G+W+H Y+ + + + L TAL+DMY KCG I A VF+ + +
Sbjct: 295 ILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKN 354
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG----- 366
L SW AM+ G G+ AL+LF + PN +T +VLSA + +G++ G
Sbjct: 355 LCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFN 414
Query: 367 RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS-EKDVIAWNSIISGLD-- 423
+M I +E Y +VD+ + +I +A+ + T E +V+ W ++++
Sbjct: 415 QMDKEFNITPKVEHY---GCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVH 471
Query: 424 --DNVSPDAVTLV 434
NV D V +
Sbjct: 472 GYTNVGEDVVGYI 484
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 146/305 (47%), Gaps = 6/305 (1%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V Y GHV ARS+FD MP D S+ MI Y N + +E +K M D
Sbjct: 229 VVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSAD 288
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ + + +L AC ++ +D G +H + + D F+ T LVDMYAKC I ++ VF+
Sbjct: 289 SIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFN 348
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
KN+ SW +M++G + L LF +M V N IT ++++AC+ + ++ +
Sbjct: 349 TMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEE 408
Query: 265 G-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGY 322
G K + + I ++D+ + G I +A+ + + ++V W A++
Sbjct: 409 GWKKFNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNAC 468
Query: 323 TQSGYPDKALKL--FTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-MVHSLGIRLGLE 379
GY + + + K ++ +V ++++ +A +Q + R M+ +G+ +
Sbjct: 469 KVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIP 528
Query: 380 DYTVI 384
Y+ I
Sbjct: 529 GYSSI 533
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 32/212 (15%)
Query: 46 SLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARS 101
S SI ++L C G+L + HA + L ND +T LV MY G + A
Sbjct: 286 SADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFG 345
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VF++MP + S+ M+ ++ +E +K M ++ F VL AC +
Sbjct: 346 VFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGS 405
Query: 162 IDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET--------LDKNVVS 213
++EG K ++ K F +T V+ Y DI + + +E L+ NVV
Sbjct: 406 VEEGWKKFNQMDK-----EFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVI 460
Query: 214 WTSM---------------IAGYVQNDCAQEG 230
W ++ + GY+Q +++G
Sbjct: 461 WGALLNACKVHGYTNVGEDVVGYIQKLVSEDG 492
>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 294/544 (54%), Gaps = 26/544 (4%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
++ +C + +G +H +K G DS V L MYAK D+ ++ +F+E DK+
Sbjct: 47 LVPSCGRREFVFQGRSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKS 106
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
VVSW +MI Y N E +++F RM E VE N +T+ SL+ A + +H
Sbjct: 107 VVSWNTMIGAYAGNGFFNESMLVFKRMVEQKVEVNPVTIMSLLPANIS------PELIHC 160
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
Y +K G+ N +VT+L+ +Y KCG+ A ++ +LVS TA+I Y + G D
Sbjct: 161 YAIKTGLINNGSVVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDL 220
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVD 389
++ F+ + D + V + S+L ++++G +H ++ GL+ + ++ N L+
Sbjct: 221 VVECFSRMQQLDMKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLIS 280
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-----------------NVSPDAVT 432
MY K + I A +F EK +I+WNS+ISG +SPD +T
Sbjct: 281 MYFKFNDIEAAISLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTIT 340
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ S+++ C+ LG +++G LH Y + L + +VGT+L++ Y KCG A VF ++
Sbjct: 341 VASLLTGCSQLGYLRLGERLHNYILRNNLEVED-FVGTSLIDMYTKCGSILLAERVFKSI 399
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
RE TW+ MI GY G +L +S M + ++P+ + F +L+AC H G++ EG
Sbjct: 400 REPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGK 459
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
K F M +F VP+++H CMV LL RAG EEAL F++NM EPD +++GA L+ C +
Sbjct: 460 KHFQIMTEEFGMVPNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCI 519
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+ LGE + KK+ L YVL+SNLYA+ RW ++RE+MK G + G S
Sbjct: 520 HQEIKLGECLAKKLYLLDYKNCGLYVLMSNLYAATNRWNDAAKMREIMKDIGGDGTSGVS 579
Query: 673 LVDL 676
+++
Sbjct: 580 QIEV 583
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 219/451 (48%), Gaps = 31/451 (6%)
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNR-MREGFVEGNQITLGSLVTACAKLRALHQG 265
LD+++VSW ++I G +N + L +F + +REGF Q TL LV +C + + QG
Sbjct: 2 LDRDIVSWNALICGCSRNGYDVDALEIFVQLLREGF-SPLQTTLVGLVPSCGRREFVFQG 60
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ +HG+ +K GI+++S + AL MY K G++ A +F+EL +VSW MI Y +
Sbjct: 61 RSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGN 120
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVI 384
G+ ++++ +F N VTI S+L A+ ++H I+ GL + +V+
Sbjct: 121 GFFNESMLVFKRMVEQKVEVNPVTIMSLLPANIS------PELIHCYAIKTGLINNGSVV 174
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-----------------NVS 427
+LV +YAKC A ++ + +K++++ +IIS + ++
Sbjct: 175 TSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMK 234
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
D+V +VS++ + +G +LH Y+ K GL + N+ V L++ Y K D ++A
Sbjct: 235 LDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNL-VSNGLISMYFKFNDIEAAIS 293
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F M EK ++W+++I G G ++ F M + P+ + ++L+ CS G
Sbjct: 294 LFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGY 353
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
+ G + + R+ V ++D+ + G + A +++ EP V+ + +
Sbjct: 354 LRLGERLHNYILRNNLEVEDFVG-TSLIDMYTKCGSILLAERVFKSIR-EPCVATWNTMI 411
Query: 608 HGCGLYSRFDLGEVMIKKMLE--LHPDKACY 636
G Y KM E L PD+ +
Sbjct: 412 SGYSWYGLEHNALNCYSKMREQGLEPDRITF 442
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 2/202 (0%)
Query: 67 AFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
A H + +GL T++ + L+SMY F ++ A S+F MP S+ +I
Sbjct: 258 ALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFYEMPEKPLISWNSVISGCVQAG 317
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLT 184
D ++F+ M+ D + +L C +L + G ++H I++ + FV T
Sbjct: 318 RASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGT 377
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+DMY KC I + +VF + V +W +MI+GY L +++MRE +E
Sbjct: 378 SLIDMYTKCGSILLAERVFKSIREPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEP 437
Query: 245 NQITLGSLVTACAKLRALHQGK 266
++IT ++ AC LH+GK
Sbjct: 438 DRITFLGVLAACIHGGLLHEGK 459
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 5/129 (3%)
Query: 49 SIPCLNLLGLCKSTGSLK---AFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFD 104
+I +LL C G L+ H ++ + L D T L+ MY G + A VF
Sbjct: 338 TITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFK 397
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
S+ P ++ MI Y L + + Y MR++ E D F VL AC + E
Sbjct: 398 SIREPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHE 457
Query: 165 GMKVHCEIV 173
G K H +I+
Sbjct: 458 GKK-HFQIM 465
>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
Length = 806
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 202/704 (28%), Positives = 339/704 (48%), Gaps = 93/704 (13%)
Query: 66 KAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+ HA ++ +G N+ TKLV Y + A ++F + + +S+ +I
Sbjct: 64 RQIHARILKNGEFYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKC 123
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDS 180
L + + + M K DNFV V KAC L+ G +H + K G G
Sbjct: 124 RVGLAEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCV 183
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
FV + L DMY KC + +R+VFDE ++NVV+W +++ GYVQN +E + L MRE
Sbjct: 184 FVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREE 243
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
VE ++T+ + ++A A + + +GK H + G+E+++ L T++L+ Y K G I A
Sbjct: 244 GVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYA 303
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
VFD + D+V+W +I GY Q G + A+++ + + VT+++++SA+A+
Sbjct: 304 EMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAART 363
Query: 361 GNLNMGRMV------HSLGIRLGL--------------------------EDYTVINALV 388
N +G+ V HS +GL +D + N L+
Sbjct: 364 QNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLL 423
Query: 389 DMYAKCHVIADA-RYIFETTSEK------------------------------------- 410
YA+ + +A R +E E
Sbjct: 424 AAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLFRNGQVDEAKEMFLQMQSSGIV 483
Query: 411 -DVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSL 452
+++W ++++GL N + P+ ++ +SACA+L ++ +G S+
Sbjct: 484 PTLVSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFSITVALSACANLASLHLGRSV 543
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H Y + L SS+V + TAL++ YAKCGD A VF ++AMI Y + G+
Sbjct: 544 HGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSYSELPLFNAMISAYALSGN 603
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
++ L+ + + ++P+ + FT +LSAC+H G + + + F M P ++HY
Sbjct: 604 VKEAIDLYRSLEDMGIKPDNITFTNVLSACNHAGDINQAIEIFSDMVSKHGMEPCLEHYG 663
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
MVDLLA AG E+AL ME MP +PD + + L C + +L + + +++LE PD
Sbjct: 664 LMVDLLASAGETEKALRLMEEMPYKPDARMIQSLLVTCNEEHKTELVDYLSRQLLESEPD 723
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ YV +SN YA +G W V ++RE+MK +GL K PGCS + +
Sbjct: 724 NSGNYVTISNAYAGEGSWDEVVKMREMMKDKGLKKKPGCSWIQI 767
Score = 228 bits (581), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 276/549 (50%), Gaps = 32/549 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C RD G ++H I+K G + ++ T LV YAKC + +F
Sbjct: 46 IYGEILQGCVYERDFHTGRQIHARILKNGEFYAKNEYIETKLVIFYAKCDAHEIAETLFS 105
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NV SW ++I + A+ L+ F M + + + + ++ AC L+
Sbjct: 106 KLRVRNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWSGF 165
Query: 265 GKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ +HGY+ K G+ + V ++L DMY KCG + DAR VFDE+ ++V+W A++VGY
Sbjct: 166 GRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYV 225
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q+G ++A++L D + P VT+++ LSASA + + G+ H++ + GLE D
Sbjct: 226 QNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNI 285
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDDNVSP-------- 428
+ ++++ Y K +I A +F+ KDV+ WN +ISG ++D +
Sbjct: 286 LGTSVLNFYCKVGLIEYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEK 345
Query: 429 ---DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
D VTL +++SA A ++G + Y + S++ + + +++ YAKCG A
Sbjct: 346 LKFDCVTLSTLMSAAARTQNSKLGKEVQCYCIRHS-FESDIGLASTVIDMYAKCGSIVDA 404
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+ VFD+ +K+ + W+ ++ Y G G +L LF +M E V PN + + I+ +
Sbjct: 405 KRVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLFRN 464
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSL 602
G V E + F M + VP++ + M++ L + G EEA+ ++ M + P+V
Sbjct: 465 GQVDEAKEMFLQM-QSSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFS 523
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
L C + LG + ++ +LH + ++YA G +++ ++
Sbjct: 524 ITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCG---DISKAEKVF 580
Query: 661 KQRGLSKSP 669
K++ S+ P
Sbjct: 581 KRKSYSELP 589
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 212/472 (44%), Gaps = 66/472 (13%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
CL+ G K HA+ +V+GL D T +++ Y G ++YA VFD M D
Sbjct: 255 CLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYAEMVFDRMIGKD 314
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
++ ++I Y L +D + K MR + D S ++ A ++ G +V C
Sbjct: 315 VVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAARTQNSKLGKEVQC 374
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
++ D + + ++DMYAKC I +++VFD T+ K+++ W +++A Y ++ + E
Sbjct: 375 YCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNTLLAAYAESGLSGE 434
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L LF M+ V N IT ++ +
Sbjct: 435 ALRLFYEMQLESVPPNAITWNLIILS---------------------------------- 460
Query: 290 MYVKCGNIRDARSVFDELCS----IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+ G + +A+ +F ++ S LVSWT M+ G Q+G ++A+ + + P
Sbjct: 461 -LFRNGQVDEAKEMFLQMQSSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRP 519
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYI 403
N +I LSA A L +L++GR VH IR L +V AL+DMYAKC I+ A +
Sbjct: 520 NVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKV 579
Query: 404 FETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV 446
F+ S ++ +N++IS D + PD +T +V+SAC G
Sbjct: 580 FKRKSYSELPLFNAMISAYALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSACNHAG-- 637
Query: 447 QVGSSLHAYS---TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ ++ +S +K G+ + G +++ A G+ + A + + M K
Sbjct: 638 DINQAIEIFSDMVSKHGMEPCLEHYGL-MVDLLASAGETEKALRLMEEMPYK 688
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 112/248 (45%), Gaps = 20/248 (8%)
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG---LED 380
++G +AL L T+ + + +L + + GR +H+ ++ G ++
Sbjct: 21 KNGEIREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGRQIHARILKNGEFYAKN 80
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII-----------------SGLD 423
+ LV YAKC A +F ++V +W +II L
Sbjct: 81 EYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKCRVGLAEGALMGFVEMLK 140
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
D + PD + +V AC +L G +H Y K GL V+V ++L + Y KCG
Sbjct: 141 DEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVFVASSLADMYGKCGVLD 200
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR VFD + E+N V W+A++ GY G ++ L DM E V+P V +T LSA +
Sbjct: 201 DARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASA 260
Query: 544 HTGMVGEG 551
+ VGEG
Sbjct: 261 NMCGVGEG 268
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/483 (34%), Positives = 262/483 (54%), Gaps = 21/483 (4%)
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
SW + E + L+ M + + ++ +CA L G+ LH ++
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE--LCSIDLVSWTAMIVGYTQSGYPDK 330
++ G E ++TAL+ MY KCG + DAR VF+E S V + A+I GYT +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVD 389
A +F K + VTI ++ L +GR +H ++ G + V+N+ +
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVT 432
MY KC + R +F+ K +I WN++ISG N V PD T
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
LVSV+S+CA LGA ++G + G + NV++ AL++ YA+CG+ AR VFD M
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEANGF-APNVFLSNALISMYARCGNLAKARAVFDIM 315
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
K+ V+W+AMIG YGM G G L LF DM+ ++P+ +F +LSACSH+G+ +G
Sbjct: 316 PVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGL 375
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ F +M R++K P +HY C+VDLL RAGRL+EA+EF+++MP+EPD +++GA L C +
Sbjct: 376 ELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKI 435
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+ D+ E+ K++E P YYVL+SN+Y+ + ++R +M++R K PG S
Sbjct: 436 HKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYS 495
Query: 673 LVD 675
V+
Sbjct: 496 YVE 498
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/450 (28%), Positives = 217/450 (48%), Gaps = 24/450 (5%)
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
S+ V +R L+ + + Y+ M + D F F +LK+C L G ++HC +
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV--VSWTSMIAGYVQNDCAQE 229
++ G + FVLT L+ MY KC + +R+VF+E + V + ++I+GY N +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+F RM+E V + +T+ LV C L G+ LHG +K G ++ + +
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFIT 196
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY+KCG++ R +FDE+ L++W A+I GY+Q+G L+LF K + P+ T
Sbjct: 197 MYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFT 256
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTS 408
+ SVLS+ A LG +G+ V L G + NAL+ MYA+C +A AR +F+
Sbjct: 257 LVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMP 316
Query: 409 EKDVIAWNSII----------SGL---DD----NVSPDAVTLVSVISACASLGAVQVGSS 451
K +++W ++I +GL DD + PD V V+SAC+ G G
Sbjct: 317 VKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLE 376
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQ 510
L ++ L + L++ + G A D+M E + W A++G +
Sbjct: 377 LFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIH 436
Query: 511 GDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + F+ ++ E +P + + ++S
Sbjct: 437 KNVDMAELAFAKVI--EFEPMNIGYYVLMS 464
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 167/365 (45%), Gaps = 14/365 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYS--FQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
T L+SMY G V+ AR VF+ P+ + +I Y N D ++ M++
Sbjct: 89 TALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETG 148
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSR 200
D+ ++ C + G +H E VK G + VL + MY KC + S R
Sbjct: 149 VSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITMYMKCGSVESGR 208
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
++FDE K +++W ++I+GY QN A + L LF +M+ V + TL S++++CA L
Sbjct: 209 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLG 268
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
A G+ + + G N L AL+ MY +CGN+ AR+VFD + LVSWTAMI
Sbjct: 269 AKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 328
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIR 375
Y G + L LF D P+ VLSA + G + G M +
Sbjct: 329 CYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLE 388
Query: 376 LGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISG--LDDNVSPDAVT 432
G E Y+ LVD+ + + +A +I E D W +++ + NV +
Sbjct: 389 PGPEHYS---CLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMAELA 445
Query: 433 LVSVI 437
VI
Sbjct: 446 FAKVI 450
>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
Length = 781
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 187/611 (30%), Positives = 318/611 (52%), Gaps = 21/611 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY G V A+ VF+ + D +++ MI Y Y + + M++
Sbjct: 45 LIQMYAQCGSVPEAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPT 104
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +L AC + +GM++H +I++ G D FV T L++MY KC + + F
Sbjct: 105 KVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFK 164
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++VVSWT+MIA VQ+D L+ RM+ V N+ITL ++ A L +
Sbjct: 165 RLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSE 224
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK+++G + +E + ++ + ++M+ G + DAR +F+++ D+V+W +I Y Q
Sbjct: 225 GKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQ 284
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+ +A++LF + N +T +L+ L +L G+++H L G + D V
Sbjct: 285 NENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVV 344
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
AL+ +Y +C A IF KDVI W + N
Sbjct: 345 ATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGR 404
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
P + TLV+V+ CA L A+Q G +H++ + V V TAL+N Y KCG A
Sbjct: 405 RPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRMEMV-VETALINMYGKCGKMAEAM 463
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ M +++ + W++M+G Y G +L LF+ M + V+ + V F ++LSA SH+G
Sbjct: 464 SVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSG 523
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP-IEPDVSLFGA 605
V +G++ F +M +DF P+ + Y C+VDLL RAGR++EA++ + + PD L+
Sbjct: 524 SVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMT 583
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C +++ D + +++LE P + YV++SN+YA+ G W VN++R+LM+ RG+
Sbjct: 584 LLGACRTHNKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGV 643
Query: 666 SKSPGCSLVDL 676
K PG S +++
Sbjct: 644 KKEPGRSSIEI 654
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/492 (27%), Positives = 237/492 (48%), Gaps = 22/492 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVF 203
D F +L+ C +++D G +VH + G + ++ G L+ MYA+C + ++QVF
Sbjct: 3 DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ K+V +WT MI Y Q L +F +M+E V ++T +++ ACA +L
Sbjct: 63 EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G +HG IL+ G E + + TAL++MY KCG++R A F L D+VSWTAMI
Sbjct: 123 DGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACV 182
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYT 382
Q A L+ + PN +T+ +V +A L+ G+ V+ L +E D
Sbjct: 183 QHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVR 242
Query: 383 VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDN 425
V+N+ V+M+ ++ DAR +FE ++DV+ WN +I+ D
Sbjct: 243 VMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDG 302
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
V + +T V +++ SL ++ G +H + G + V TAL++ Y +C A
Sbjct: 303 VKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAG-YDRDAVVATALMSLYGRCEAPGQA 361
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
+F M K+ +TW+ M Y G +L LF +M E +P +L C+H
Sbjct: 362 WKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHL 421
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
+ +G + +S + +F M ++++ + G++ EA+ E M + D+ ++ +
Sbjct: 422 AALQKG-RQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMA-KRDILVWNS 479
Query: 606 FLHGCGLYSRFD 617
L + +D
Sbjct: 480 MLGAYAQHGYYD 491
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 216/447 (48%), Gaps = 32/447 (7%)
Query: 34 QHELDQTFASFHSLPS-------IPCLNLLGLCKSTGSLK---AFHALLIVDGLTNDK-C 82
Q + D+ F+ + + + +L C ST SLK H ++ G D
Sbjct: 83 QGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDVFV 142
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
T L++MY G V+ A F + + D S+ MI +D + Y+ M+
Sbjct: 143 GTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGV 202
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ V A + + EG V+ + V D V+ V+M+ +G +R+
Sbjct: 203 VPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDARR 262
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F++ +D++VV+W +I YVQN+ E + LF R+++ V+ N IT ++ L +
Sbjct: 263 LFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSLTS 322
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L +GK +H + + G + ++ + TAL+ +Y +C A +F ++ S D+++WT M V
Sbjct: 323 LAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVA 382
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI--RLGLE 379
Y Q+G+ +AL+LF + + P T+ +VL A L L GR +HS I R +E
Sbjct: 383 YAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFRME 442
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD---------------- 423
V AL++MY KC +A+A +FE +++D++ WNS++
Sbjct: 443 -MVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQ 501
Query: 424 -DNVSPDAVTLVSVISACASLGAVQVG 449
D V DAV+ VSV+SA + G+V G
Sbjct: 502 LDGVKADAVSFVSVLSALSHSGSVTDG 528
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 110/230 (47%), Gaps = 9/230 (3%)
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD V+++ C+S V G +H + +G +N+ G L+ YA+CG A+
Sbjct: 2 PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGH-LIQMYAQCGSVPEAQQ 60
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF+ + K+ W+ MIG Y QGD +L +F M E+V P +V + IL+AC+ T
Sbjct: 61 VFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
+ +G + + + F + ++++ + G + A + + + DV + A +
Sbjct: 121 LKDGMEIHGQILQQ-GFEGDVFVGTALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTAMI 178
Query: 608 HGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVSNL----YASDGRWI 651
C + +F L + ++M + P+K Y + + Y S+G+++
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFV 228
>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 912
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/581 (31%), Positives = 308/581 (53%), Gaps = 22/581 (3%)
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
D S+ M+ N + + E Y M + + F F K+L A + G +H
Sbjct: 182 DVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLH 241
Query: 170 CEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
++ G + VL T +VDMY+KCR + + +V + T + +V WT++I+G+ QN +
Sbjct: 242 AHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVR 301
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E + +F M + N T SL+ A + + +L G+ H ++ +G+E + ++ AL+
Sbjct: 302 EAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALV 361
Query: 289 DMYVKCGNIR-DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
DMY+KC +I +A VF E+ S +++ WT++I G+ + D + +LF + + A PN
Sbjct: 362 DMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLED-SFQLFAEMQAAGVRPNS 420
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T++++L A ++ +L M+H I+ ++ D V NALVD YA +I +A + T
Sbjct: 421 FTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGT 480
Query: 407 TSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
+ +D I + + + L+ D + D +L S +SA A LG ++ G
Sbjct: 481 MNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETG 540
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
LH YS K G + V +L++ Y+KCG A F + E + +W+ +I G+
Sbjct: 541 KQLHCYSVKSGFQRCHS-VSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSW 599
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G +L+ F DM V+P+ + +++SACSH G++ G + F+SM +++ P +
Sbjct: 600 NGLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLD 659
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY+C+VDLL R GRLEEA+ +E M +PD + L+ C L+ LGE M ++ LEL
Sbjct: 660 HYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLEL 719
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
P Y+L++NLY + G + R LM++RGL +SPG
Sbjct: 720 DPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRERGLRRSPG 760
Score = 235 bits (599), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 170/584 (29%), Positives = 295/584 (50%), Gaps = 31/584 (5%)
Query: 52 CLNLLGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMP 107
CL +L C S SLK H+ +I GL +D L+S+Y V AR +FD MP
Sbjct: 18 CLRVLSFCNSN-SLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMP 76
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
N D S+ ++ + + D ++ + M + + F S L++C L + + GM+
Sbjct: 77 NRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQ 136
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCR--DIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+HC VK+G + FV T LV+ Y KC + + + + +VVSWT+M++ V+N
Sbjct: 137 IHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVEN 196
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E ++ +M E V N+ T L+ A + L GK LH +++ G E+N L
Sbjct: 197 GKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLK 256
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
TA++DMY KC + DA V + D+ WT +I G+TQ+ +A+ +F D + +
Sbjct: 257 TAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLL 316
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKC-HVIADARY 402
PN+ T +S+L+AS+ + +L++G HS I +GLED I NALVDMY KC H+ +A
Sbjct: 317 PNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVK 376
Query: 403 IFETTSEKDVIAWNSIISG-----LDDN-----------VSPDAVTLVSVISACASLGAV 446
+F + +V+ W S+I+G L+D+ V P++ T+ +++ AC+ ++
Sbjct: 377 VFREITSPNVMCWTSLIAGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSL 436
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
LH + K + ++ V AL++ YA G A V M ++++T++ +
Sbjct: 437 VPTMMLHGHIIKTK-VDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAAR 495
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF-YSMCRDFKFV 565
+G G +L + M N+ ++ +E + LSA + G + G + YS+ F+
Sbjct: 496 LNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRC 555
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
S+ + +V L ++ G + +A +++ EPD + + G
Sbjct: 556 HSVSN--SLVHLYSKCGSIHDANRAFKDIS-EPDAFSWNGLISG 596
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 274/466 (58%), Gaps = 21/466 (4%)
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L LF M + + TL L+ A A+ A + H + KIG+ + H V +L+ M
Sbjct: 137 LRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITM 196
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVT 349
Y + AR VFD + + D+VSW AM+ Y + G + ++F D K PN VT
Sbjct: 197 YSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVT 256
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+A VL+A G+L +GR V +E D V +AL+ MY KC IA+AR +F+T
Sbjct: 257 VAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTII 316
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+KD++AWN++I+G N + PD +TL V+SAC+++GA+++GS
Sbjct: 317 DKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSE 376
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
L Y++++GL S NVYVGTAL++ YAKCGD A VF M KN +W+A+I G G
Sbjct: 377 LDGYASRRGLYS-NVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNG 435
Query: 512 DGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G ++ F M NEE ++P+++ F +LSAC H G+V +G + F S+ +F+ +P ++H
Sbjct: 436 RGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEH 495
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVDLLAR+G LEEA +F+E +P + D + GA L C ++GE +I ++++L
Sbjct: 496 YSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLE 555
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P + YV+ S +YAS R ++R LM++RG++K+PGCS V++
Sbjct: 556 PTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEV 601
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 220/462 (47%), Gaps = 32/462 (6%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDG--------LTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
NLL C+S ++K HA L+ T S + YA + S
Sbjct: 53 NLLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAAAASDYALLLLAS 112
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P +S+ V IR++ + + + F +R ++ D++ +L A
Sbjct: 113 HSAPTAFSYNVAIRFFASSRPHTSLRLFLHMLRSAIRP-DSYTLPFLLLAAARYPAPSLA 171
Query: 166 MKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
H + K+G G D V + L+ MY+ D G++R+VFD ++VVSW +M+ Y +
Sbjct: 172 RAAHALLGKIGLNGHDHTVHS-LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGR 230
Query: 224 NDCAQE-GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
E G + + ++EG V N +T+ ++ AC L G+W+ + +E++S
Sbjct: 231 VGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL 290
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ +ALL MY KCG I +AR VFD + D+V+W AMI GY Q+G ++A+ LF + A
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAG 350
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADAR 401
P+ +T+A VLSA + +G L +G + R GL + V ALVDMYAKC + A
Sbjct: 351 MRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAI 410
Query: 402 YIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACASL 443
+F K+V +WN++I GL ++ + PD +T + V+SAC
Sbjct: 411 EVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHA 470
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
G V+ G T + + + + +++ A+ G + A
Sbjct: 471 GLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEA 512
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 229/478 (47%), Gaps = 38/478 (7%)
Query: 19 LQLRFFSYTNQQTPTQHELDQTFASFHSLP-SIPCLNLLGLCKSTGSL-KAFHALLIVDG 76
+ +RFF+ + T + L ++ ++P L L SL +A HALL G
Sbjct: 123 VAIRFFASSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIG 182
Query: 77 LT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK 135
L +D L++MY AR VFD +P D S+ M++ Y + ++ ++
Sbjct: 183 LNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFR 242
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG------PDSFVLTGLVDM 189
M K N V V+ A C D+G V V+ DS V + L+ M
Sbjct: 243 DMVKEGTVAPNVVTVAVVLAACR----DQGDLVLGRWVEEWSWSARMEMDSLVGSALLGM 298
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y KC +I +R+VFD +DK++V+W +MI GY QN + E + LF+ MR + ++ITL
Sbjct: 299 YEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITL 358
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
+++AC+ + AL G L GY + G+ N ++ TAL+DMY KCG++ A VF ++
Sbjct: 359 AGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPC 418
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQLGNLNMG-R 367
++ SW A+I G +G D+A++ F + P+ +T VLSA G + G R
Sbjct: 419 KNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKR 478
Query: 368 MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS 427
+SL ++ +I + ++A + ++ E AW+ I + D V
Sbjct: 479 WFNSL-----TPEFQIIPKIEHYSCMVDLLARSGHLEE--------AWD-FIEKIPDKV- 523
Query: 428 PDAVTLVSVISACASLGAVQVGS-------SLHAYSTKQGLLSSNVYVGTALLNFYAK 478
DAV L ++++AC V++G L ++ ++SS +Y + L+ AK
Sbjct: 524 -DAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAK 580
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 157/318 (49%), Gaps = 24/318 (7%)
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
+ + S P +L+LF + P+ T+ +L A+A+ ++ R H+L ++GL
Sbjct: 125 IRFFASSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLN 184
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------------- 422
D+TV ++L+ MY+ AR +F+ +DV++WN+++
Sbjct: 185 GHDHTV-HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRD 243
Query: 423 ---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ V+P+ VT+ V++AC G + +G + +S + + VG+ALL Y KC
Sbjct: 244 MVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSW-SARMEMDSLVGSALLGMYEKC 302
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G+ AR VFD + +K+ V W+AMI GY G +++LF M ++P+++ +L
Sbjct: 303 GEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVL 362
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACS G + G + R ++ +VD+ A+ G L++A+E MP + +
Sbjct: 363 SACSAVGALELGSELDGYASRR-GLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCK-N 420
Query: 600 VSLFGAFLHGCGLYSRFD 617
V+ + A + G R D
Sbjct: 421 VASWNALICGLAFNGRGD 438
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 274/466 (58%), Gaps = 21/466 (4%)
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L LF M + + TL L+ A A+ A + H + KIG+ + H V +L+ M
Sbjct: 137 LRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITM 196
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVT 349
Y + AR VFD + + D+VSW AM+ Y + G + ++F D K PN VT
Sbjct: 197 YSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNAVT 256
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+A VL+A G+L +GR V +E D V +AL+ MY KC IA+AR +F+T
Sbjct: 257 VAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTII 316
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+KD++AWN++I+G N + PD +TL V+SAC+++GA+++GS
Sbjct: 317 DKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSE 376
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
L Y++++GL S NVYVGTAL++ YAKCGD A VF M KN +W+A+I G G
Sbjct: 377 LDGYASRRGLYS-NVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNG 435
Query: 512 DGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G ++ F M NEE ++P+++ F +LSAC H G+V +G + F S+ +F+ +P ++H
Sbjct: 436 RGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEH 495
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVDLLAR+G LEEA +F+E +P + D + GA L C ++GE +I ++++L
Sbjct: 496 YSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLE 555
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P + YV+ S +YAS R ++R LM++RG++K+PGCS V++
Sbjct: 556 PTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEV 601
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 220/462 (47%), Gaps = 32/462 (6%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDG--------LTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
NLL C+S ++K HA L+ T S + YA + S
Sbjct: 53 NLLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAAAASDYALLLLAS 112
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P +S+ V IR++ + + + F +R ++ D++ +L A
Sbjct: 113 HSAPTAFSYNVAIRFFASSRPHTSLRLFLHMLRSAIRP-DSYTLPFLLLAAARYPAPSLA 171
Query: 166 MKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
H + K+G G D V + L+ MY+ D G++R+VFD ++VVSW +M+ Y +
Sbjct: 172 RAAHALLGKIGLNGHDHTVHS-LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGR 230
Query: 224 NDCAQE-GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
E G + + ++EG V N +T+ ++ AC L G+W+ + +E++S
Sbjct: 231 VGMNGEVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL 290
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ +ALL MY KCG I +AR VFD + D+V+W AMI GY Q+G ++A+ LF + A
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAG 350
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADAR 401
P+ +T+A VLSA + +G L +G + R GL + V ALVDMYAKC + A
Sbjct: 351 MRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAI 410
Query: 402 YIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACASL 443
+F K+V +WN++I GL ++ + PD +T + V+SAC
Sbjct: 411 EVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHA 470
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
G V+ G T + + + + +++ A+ G + A
Sbjct: 471 GLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEA 512
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 229/478 (47%), Gaps = 38/478 (7%)
Query: 19 LQLRFFSYTNQQTPTQHELDQTFASFHSLP-SIPCLNLLGLCKSTGSL-KAFHALLIVDG 76
+ +RFF+ + T + L ++ ++P L L SL +A HALL G
Sbjct: 123 VAIRFFASSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIG 182
Query: 77 LT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK 135
L +D L++MY AR VFD +P D S+ M++ Y + ++ ++
Sbjct: 183 LNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFR 242
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG------PDSFVLTGLVDM 189
M K N V V+ A C D+G V V+ DS V + L+ M
Sbjct: 243 DMVKEGTVAPNAVTVAVVLAACR----DQGDLVLGRWVEEWSWSARMEMDSLVGSALLGM 298
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y KC +I +R+VFD +DK++V+W +MI GY QN + E + LF+ MR + ++ITL
Sbjct: 299 YEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITL 358
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
+++AC+ + AL G L GY + G+ N ++ TAL+DMY KCG++ A VF ++
Sbjct: 359 AGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPC 418
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQLGNLNMG-R 367
++ SW A+I G +G D+A++ F + P+ +T VLSA G + G R
Sbjct: 419 KNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKR 478
Query: 368 MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS 427
+SL ++ +I + ++A + ++ E AW+ I + D V
Sbjct: 479 WFNSL-----TPEFQIIPKIEHYSCMVDLLARSGHLEE--------AWD-FIEKIPDKV- 523
Query: 428 PDAVTLVSVISACASLGAVQVGS-------SLHAYSTKQGLLSSNVYVGTALLNFYAK 478
DAV L ++++AC V++G L ++ ++SS +Y + L+ AK
Sbjct: 524 -DAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAK 580
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 158/318 (49%), Gaps = 24/318 (7%)
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
+ + S P +L+LF + P+ T+ +L A+A+ ++ R H+L ++GL
Sbjct: 125 IRFFASSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLN 184
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------------- 422
D+TV ++L+ MY+ AR +F+ +DV++WN+++
Sbjct: 185 GHDHTV-HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRD 243
Query: 423 ---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ V+P+AVT+ V++AC G + +G + +S + + VG+ALL Y KC
Sbjct: 244 MVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSW-SARMEMDSLVGSALLGMYEKC 302
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G+ AR VFD + +K+ V W+AMI GY G +++LF M ++P+++ +L
Sbjct: 303 GEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVL 362
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACS G + G + R ++ +VD+ A+ G L++A+E MP + +
Sbjct: 363 SACSAVGALELGSELDGYASRR-GLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCK-N 420
Query: 600 VSLFGAFLHGCGLYSRFD 617
V+ + A + G R D
Sbjct: 421 VASWNALICGLAFNGRGD 438
>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g47840
gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 706
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/617 (31%), Positives = 311/617 (50%), Gaps = 27/617 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N+ L S+ + G+++ AR VFD MP+ D S+ +I+ Y + + + + MR +
Sbjct: 44 NSHLRSLINA-GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMR--VV 100
Query: 143 EH----DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIG 197
+H D V S VLKAC + +I G +H VK S +V + L+DMY + I
Sbjct: 101 DHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKID 160
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
S +VF E +N V+WT++I G V +EGL F+ M + T + ACA
Sbjct: 161 KSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
LR + GK +H +++ G + +L MY +CG ++D +F+ + D+VSWT+
Sbjct: 221 GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTS 280
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
+IV Y + G KA++ F + + PN T AS+ SA A L L G +H + LG
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 378 LED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------- 422
L D +V N+++ MY+ C + A +F+ +D+I+W++II G
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 423 ---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
P L S++S ++ ++ G +HA + GL N V ++L+N Y+KC
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGL-EQNSTVRSSLINMYSKC 459
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G + A M+F + V+ +AMI GY G ++ LF L +P+ V F ++L
Sbjct: 460 GSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVL 519
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
+AC+H+G + G+ F M + P+ +HY CMVDLL RAGRL +A + + M + D
Sbjct: 520 TACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKD 579
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
++ L C + G +++LEL P A V ++N+Y+S G VR+
Sbjct: 580 DVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKN 639
Query: 660 MKQRGLSKSPGCSLVDL 676
MK +G+ K PG S + +
Sbjct: 640 MKAKGVIKEPGWSSIKI 656
>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 209/710 (29%), Positives = 341/710 (48%), Gaps = 97/710 (13%)
Query: 61 STGSLKAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
STG + HA ++ +G N+ TKLV Y ++ A+ +F + + +S+ +
Sbjct: 82 STG--QQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAI 139
Query: 118 IRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG 177
I L + + + M + DNFV V KAC L+ G VH + K G
Sbjct: 140 IGVRCRIGLVEGALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGL 199
Query: 178 PDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D FV + L DMY KC + +R+VFDE D+ VV+W +++ GYVQN QE + L +
Sbjct: 200 HDCVFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSA 259
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
MR +E ++T+ + ++A A + + +GK H + G+E+++ L T++L+ Y K G
Sbjct: 260 MRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGL 319
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
I A +FD + D+V+W +I GY Q G + A+ + + + + VT++S++SA
Sbjct: 320 IEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSA 379
Query: 357 SAQLGNLNMGRMVHSLGIRLGL--------------------------------EDYTVI 384
+A+ NL +G+ V IR G +D +
Sbjct: 380 AARTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILW 439
Query: 385 NALVDMYAKCHVIADA-RYIFETTSE---KDVIAWNSIISGLDDN--------------- 425
N L+ YA+ + +A R +E E +VI WNS+I L N
Sbjct: 440 NTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQMQS 499
Query: 426 --VSPDAVTLVSV-----------------------------------ISACASLGAVQV 448
+SP+ ++ ++ +SACA+L ++
Sbjct: 500 SGISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHF 559
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G S+H Y + SS+V + T+L++ YAKCGD A VF + ++AMI Y
Sbjct: 560 GRSIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYA 619
Query: 509 MQGDGGGSLALFSDMLNEEV--QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVP 566
+ G+ + AL+ L+E+V +P+ + T +LSAC H G + + F M P
Sbjct: 620 LYGNVKEATALYRS-LDEDVGIEPDNITITNVLSACHHAGDINQAIHIFTDMVSKHAMKP 678
Query: 567 SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM 626
++HY MVDLLA AG E+AL +E MP +PD + + L C + +L E + + +
Sbjct: 679 CLEHYGLMVDLLASAGETEKALRLIEEMPYKPDARMIQSLLASCNKQHKSELVEYLSRHL 738
Query: 627 LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
LE P+ + YV +SN+YA +G W V ++RE+MK +GL K PGCS + +
Sbjct: 739 LESEPENSGNYVTISNVYAVEGSWDEVGKMREMMKVKGLKKKPGCSWIQI 788
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 246/468 (52%), Gaps = 23/468 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C RD+ G ++H I+K G + ++ T LV YAKC + ++ +F
Sbjct: 67 IYGEILQGCVYERDLSTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFS 126
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NV SW ++I + + L+ F M E + + + ++ AC L+
Sbjct: 127 KLRARNVFSWAAIIGVRCRIGLVEGALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRF 186
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY+ K G+ + ++L DMY KCG + DAR VFDE+ +V+W A++VGY Q
Sbjct: 187 GRGVHGYVAKAGLHDCVFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQ 246
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G +A++L + + P VT+++ LSASA +G + G+ H++ I GLE D +
Sbjct: 247 NGMNQEAIRLLSAMRNEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 306
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDD-----------NV 426
++++ Y K +I A IF+ EKDV+ WN +ISG ++D N+
Sbjct: 307 GTSILNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNL 366
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+ D VTL S++SA A +++G + Y + G +S V TA + YAKCG A+
Sbjct: 367 NFDCVTLSSLMSAAARTHNLKLGKEVQCYCIRHGFVSDIVLASTA-VEMYAKCGSIVDAK 425
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF++ EK+ + W+ ++ Y G G +L LF +M E V PN + + +++ + G
Sbjct: 426 KVFNSTVEKDLILWNTLLAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNG 485
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
V E F M + P++ + M++ L + G EEA+ ++ M
Sbjct: 486 QVNEAKDMFLQM-QSSGISPNLISWTTMMNGLVQNGCSEEAIVYLRKM 532
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/497 (34%), Positives = 278/497 (55%), Gaps = 34/497 (6%)
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E N+VSW+++I G+ QN +E L L RM+ E N TL S++ ACA+L+ L+
Sbjct: 5 ENSKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNL 64
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +HGY+ + G N +V L+D+Y +C ++ A +F ++VS+ MIVGY +
Sbjct: 65 GKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCE 124
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE----- 379
+G +KA +LF + + ++ S++S A N+ + +L +
Sbjct: 125 NGNVEKAKELFDQMELVG--KDTISWNSMISGYAD----NLLKCEDLKAAQLAFDGVTER 178
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTS----EKDVIAWNSIISGLDDN---------- 425
D N L+ YA C+ + + + + + E +V WN IISG +N
Sbjct: 179 DTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLF 238
Query: 426 -------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ PD T+ ++ ACA L + G +HA+S +QG +V++G AL++ YAK
Sbjct: 239 TEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGY-ELDVHIGAALVDMYAK 297
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CG + A V++ + N V+ +AM+ Y M G G +ALF +ML +P+ V F ++
Sbjct: 298 CGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSV 357
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
LS+C H G V G + F+ + + PS+KHY C+VDLL+RAGRL+EA E ++ +P +P
Sbjct: 358 LSSCVHAGAVETGHE-FFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKP 416
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
D ++GA L GC ++ +LGE+ + ++EL P+ YVL++NLYA GRW +++ R+
Sbjct: 417 DSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQ 476
Query: 659 LMKQRGLSKSPGCSLVD 675
++K RG+ KSPGCS ++
Sbjct: 477 MIKDRGMHKSPGCSWIE 493
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 212/435 (48%), Gaps = 41/435 (9%)
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
P+ S+ +I + N K+ +E M+ E + + VL AC L++++ G ++
Sbjct: 9 PNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEI 68
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H + + G + FV+ GLVD+Y +C D+GS+ ++F KNVVS+ +MI GY +N
Sbjct: 69 HGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNV 128
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTA-------CAKLRALHQGKWLHGYILKIGIEIN 280
++ LF++M V + I+ S+++ C L+A E +
Sbjct: 129 EKAKELFDQME--LVGKDTISWNSMISGYADNLLKCEDLKAAQ-------LAFDGVTERD 179
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDEL----CSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
+ L+ Y C + + +++ ++ ++ +W +I G+ ++G+ + AL+LFT
Sbjct: 180 TATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFT 239
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
+ + + P+ T+ +L A A+L + G+ VH+ IR G E D + ALVDMYAKC
Sbjct: 240 EMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCG 299
Query: 396 VIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVIS 438
I A ++ S ++++ N++++ L + PD VT +SV+S
Sbjct: 300 SIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLS 359
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNT 497
+C GAV+ G T + S + T +++ ++ G A +V R+ ++
Sbjct: 360 SCVHAGAVETGHEFFDLMTYYNVTPSLKHY-TCIVDLLSRAGRLDEAYELVKKIPRKPDS 418
Query: 498 VTWSAMIGGYGMQGD 512
V W A++GG + G+
Sbjct: 419 VMWGALLGGCVIWGN 433
Score = 40.4 bits (93), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA I G D LV MY G +K+A V++ + NP+ S M+ Y ++
Sbjct: 270 KQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMH 329
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ + ++ M D+ F VL +C ++ G
Sbjct: 330 GHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETG 370
>gi|302805298|ref|XP_002984400.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
gi|300147788|gb|EFJ14450.1| hypothetical protein SELMODRAFT_120073 [Selaginella moellendorffii]
Length = 660
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 182/585 (31%), Positives = 292/585 (49%), Gaps = 30/585 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCM-RKRLKEH 144
L++M+G AR VFD+ N + S+ M+ Y N +++ + +K M + +
Sbjct: 80 LINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQNGHFEETIALFKQMASTKTVKP 139
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVF 203
D F+ VL +C L ++ EG H V+ G + V L+ MY+KC + +R +F
Sbjct: 140 DKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIF 199
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
+ +VV+WT MI+ Y QN QE + LF RM V + + + + ACA L
Sbjct: 200 SRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMT---VPPDGVAFATALGACASAENLE 256
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G+ + I+++G++ + A+LD+Y KC I + +F + D VSW M+ Y
Sbjct: 257 AGRVVRAQIVELGLDAERAVANAVLDLYGKCAEIVETAEIFGRMRQRDRVSWNTMVAAYA 316
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTI----ASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
++G+ +L F + P+ V++ SVLS+ A L NL G++ H+ + GLE
Sbjct: 317 RAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLSSCANLENLREGKLAHAAAVEAGLE 376
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
V L+ MY+KCH + +AR IF + DV+AW +IS N
Sbjct: 377 FAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRI 436
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
V PD V + + ACA ++ G + A + GL + V A+L+ Y KC +
Sbjct: 437 TVPPDGVGFATALEACARAENLEAGV-VRAKIVELGLDAERA-VADAVLDLYGKCAEIVE 494
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
+FD MR+++ V+W+ M+ Y G GSL F M E V P+EV ++LS SH
Sbjct: 495 TAEIFDRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSVLSTYSH 554
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR--LEEALEFMENMPIEPDVSL 602
G+V +G +CF S+ D+ VPS + C+VDLL RAG E+ + + P L
Sbjct: 555 AGLVEQGCQCFASIASDYGMVPSREQQGCVVDLLGRAGSWIAEDLIRVV--APSTSSSEL 612
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
+ A L C ++S +LG+ +LE+ P ++++SN+YA D
Sbjct: 613 WKAVLSSCRIHSDVELGDCAAACVLEMDPGSDSAHIILSNIYAMD 657
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/509 (28%), Positives = 228/509 (44%), Gaps = 56/509 (11%)
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
T NVV+W + I + A L F R ++G + + A + +
Sbjct: 2 TDKTNVVTWNAFIRALASSRDASGALQTF---RSLLLQGLVPDTVTFINASQGAKTPPEA 58
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
K+L + G++++ L AL++M+ +AR VFD + ++VSW AM+ Y+Q+
Sbjct: 59 KYLETCRQESGVQLDIALGNALINMFGGSSQACEARRVFDATHNKNIVSWNAMLSAYSQN 118
Query: 326 GYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
G+ ++ + LF P+ +T ASVLS+ A L NL G++ H+ + GLE V
Sbjct: 119 GHFEETIALFKQMASTKTVKPDKLTFASVLSSCANLENLREGKLAHAAAVEAGLEFAVPV 178
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------VSPD 429
L+ MY+KCH + +AR IF + DV+AW +IS N V PD
Sbjct: 179 AATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMISAYAQNGRPQEAIALFFRMTVPPD 238
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
V + + ACAS ++ G + A + GL + V A+L+ Y KC + +F
Sbjct: 239 GVAFATALGACASAENLEAGRVVRAQIVELGLDAERA-VANAVLDLYGKCAEIVETAEIF 297
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV----IFTTILSAC--- 542
MR+++ V+W+ M+ Y G GSL F M E V P+EV FT++LS+C
Sbjct: 298 GRMRQRDRVSWNTMVAAYARAGHTAGSLWCFRAMQLEGVCPSEVSLVSSFTSVLSSCANL 357
Query: 543 --------SHTGMVGEGWK----------CFYSMC------RD-FKFVPS--MKHYVCMV 575
+H V G + YS C RD F PS + + M+
Sbjct: 358 ENLREGKLAHAAAVEAGLEFAVPVAATLIQMYSKCHCLEEARDIFSRSPSSDVVAWTVMI 417
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD-KA 634
A+ GR +EA+ + + PD F L C + G V+ K++EL D +
Sbjct: 418 SAYAQNGRPQEAIALFFRITVPPDGVGFATALEACARAENLEAG-VVRAKIVELGLDAER 476
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQR 663
V +LY + ++ + M+QR
Sbjct: 477 AVADAVLDLYGKCAEIVETAEIFDRMRQR 505
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/466 (38%), Positives = 274/466 (58%), Gaps = 21/466 (4%)
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L LF M + + TL L+ A A+ A + H + KIG+ + H V +L+ M
Sbjct: 137 LRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITM 196
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVT 349
Y + AR VFD + + D+VSW AM+ Y + G + ++F D K PN VT
Sbjct: 197 YSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVT 256
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+A VL+A G+L +GR V +E D V +AL+ MY KC IA+AR +F+T
Sbjct: 257 VAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTII 316
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+KD++AWN++I+G N + PD +TL V+SAC+++GA+++GS
Sbjct: 317 DKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVLSACSAVGALELGSE 376
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
L Y++++GL S NVYVGTAL++ YAKCGD A VF M KN +W+A+I G G
Sbjct: 377 LDGYASRRGLYS-NVYVGTALVDMYAKCGDLDKAIEVFRKMPCKNVASWNALICGLAFNG 435
Query: 512 DGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH 570
G ++ F M NEE ++P+++ F +LSAC H G+V +G + F S+ +F+ +P ++H
Sbjct: 436 RGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKRWFNSLTPEFQIIPKIEH 495
Query: 571 YVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH 630
Y CMVDLLAR+G LEEA +F+E +P + D + GA L C ++GE +I ++++L
Sbjct: 496 YSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAACRKCKNVEIGERVINRIIQLE 555
Query: 631 PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P + YV+ S +YAS R ++R LM++RG++K+PGCS V++
Sbjct: 556 PTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPGCSWVEV 601
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 220/462 (47%), Gaps = 32/462 (6%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDG--------LTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
NLL C+S ++K HA L+ T S + YA + S
Sbjct: 53 NLLPKCRSLAAVKQLHAHLLHRASFPYNHFLSKLLSLFTSSSSSSAAAAASDYALLLLAS 112
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
P +S+ V IR++ + + + F +R ++ D++ +L A
Sbjct: 113 HSAPTAFSYNVAIRFFASSRPHTSLRLFLHMLRSAIRP-DSYTLPFLLLAAARYPAPSLA 171
Query: 166 MKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
H + K+G G D V + L+ MY+ D G++R+VFD ++VVSW +M+ Y +
Sbjct: 172 RAAHALLGKIGLNGHDHTVHS-LITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGR 230
Query: 224 NDCAQE-GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
E G + + ++EG V N +T+ ++ AC L G+W+ + +E++S
Sbjct: 231 VGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSL 290
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ +ALL MY KCG I +AR VFD + D+V+W AMI GY Q+G ++A+ LF + A
Sbjct: 291 VGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAG 350
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADAR 401
P+ +T+A VLSA + +G L +G + R GL + V ALVDMYAKC + A
Sbjct: 351 MRPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAI 410
Query: 402 YIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACASL 443
+F K+V +WN++I GL ++ + PD +T + V+SAC
Sbjct: 411 EVFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHA 470
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
G V+ G T + + + + +++ A+ G + A
Sbjct: 471 GLVKDGKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEA 512
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 229/478 (47%), Gaps = 38/478 (7%)
Query: 19 LQLRFFSYTNQQTPTQHELDQTFASFHSLP-SIPCLNLLGLCKSTGSL-KAFHALLIVDG 76
+ +RFF+ + T + L ++ ++P L L SL +A HALL G
Sbjct: 123 VAIRFFASSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIG 182
Query: 77 LT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK 135
L +D L++MY AR VFD +P D S+ M++ Y + ++ ++
Sbjct: 183 LNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFR 242
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG------PDSFVLTGLVDM 189
M K N V V+ A C D+G V V+ DS V + L+ M
Sbjct: 243 DMVKEGTVAPNVVTVAVVLAACR----DQGDLVLGRWVEEWSWSARMEMDSLVGSALLGM 298
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y KC +I +R+VFD +DK++V+W +MI GY QN + E + LF+ MR + ++ITL
Sbjct: 299 YEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITL 358
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
+++AC+ + AL G L GY + G+ N ++ TAL+DMY KCG++ A VF ++
Sbjct: 359 AGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPC 418
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQLGNLNMG-R 367
++ SW A+I G +G D+A++ F + P+ +T VLSA G + G R
Sbjct: 419 KNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKDGKR 478
Query: 368 MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS 427
+SL ++ +I + ++A + ++ E AW+ I + D V
Sbjct: 479 WFNSL-----TPEFQIIPKIEHYSCMVDLLARSGHLEE--------AWD-FIEKIPDKV- 523
Query: 428 PDAVTLVSVISACASLGAVQVGS-------SLHAYSTKQGLLSSNVYVGTALLNFYAK 478
DAV L ++++AC V++G L ++ ++SS +Y + L+ AK
Sbjct: 524 -DAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAK 580
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 157/318 (49%), Gaps = 24/318 (7%)
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
+ + S P +L+LF + P+ T+ +L A+A+ ++ R H+L ++GL
Sbjct: 125 IRFFASSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLN 184
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------------- 422
D+TV ++L+ MY+ AR +F+ +DV++WN+++
Sbjct: 185 GHDHTV-HSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRD 243
Query: 423 ---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ V+P+ VT+ V++AC G + +G + +S + + VG+ALL Y KC
Sbjct: 244 MVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSW-SARMEMDSLVGSALLGMYEKC 302
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G+ AR VFD + +K+ V W+AMI GY G +++LF M ++P+++ +L
Sbjct: 303 GEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDKITLAGVL 362
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACS G + G + R ++ +VD+ A+ G L++A+E MP + +
Sbjct: 363 SACSAVGALELGSELDGYASRR-GLYSNVYVGTALVDMYAKCGDLDKAIEVFRKMPCK-N 420
Query: 600 VSLFGAFLHGCGLYSRFD 617
V+ + A + G R D
Sbjct: 421 VASWNALICGLAFNGRGD 438
>gi|347954456|gb|AEP33728.1| chlororespiratory reduction 21, partial [Brassica oleracea]
Length = 643
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/618 (30%), Positives = 311/618 (50%), Gaps = 29/618 (4%)
Query: 66 KAFHALLIVDGLTNDKC---NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+ H + GL D C + L MYG G + AR VFD +P + ++ ++ Y
Sbjct: 4 RGVHGYVAKSGL--DDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYV 61
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSF 181
N + ++ + MR+ E S L A + ++EG H V G D+
Sbjct: 62 QNGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKXSHALAVVNGLELDNI 121
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
+ T +++ Y K I + VFD + K+VV+W +I+GYVQ ++ + + MR
Sbjct: 122 LGTSILNFYCKVGLIDYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEK 181
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
++ + +TL +L++ A+ + GK + Y ++ E + L +A +DMY KCG+I DA+
Sbjct: 182 LKFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAK 241
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD DL+ W ++ Y +SG +AL+LF + + PN +T ++ + + G
Sbjct: 242 KVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 301
Query: 362 NLNMGR----MVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
++ + + S GI + + T++N LV I R + E+
Sbjct: 302 QVDEAKEMFLQMQSSGIVPTIVSWTTMMNGLVXNGCSEEAIHYLRKMQES---------- 351
Query: 417 SIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ P+ ++ +SACA+L ++ G S+H Y + L SS+V + T+L++ Y
Sbjct: 352 --------GMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMY 403
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCGD A VF ++AMI Y + G+ ++AL+ + + ++P+ + FT
Sbjct: 404 AKCGDISKAEKVFRRKLFSELPLYNAMISAYALYGNVEEAMALYGSLEDMGIKPDNITFT 463
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
ILSAC+H G + + + F M P ++HY MVDLLA AG E+AL ME MP
Sbjct: 464 NILSACNHAGDINQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMPY 523
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
EPD + + L C + +L E + K++LE PD + YV +SN YA +G W V ++
Sbjct: 524 EPDARMIQSLLATCNKEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAGEGSWDEVVKM 583
Query: 657 RELMKQRGLSKSPGCSLV 674
RE+MK +GL K PGCS +
Sbjct: 584 REMMKAKGLKKQPGCSWI 601
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 150/539 (27%), Positives = 251/539 (46%), Gaps = 63/539 (11%)
Query: 165 GMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G VH + K G D FV + L DMY KC + +R+VFDE ++NVV+W +++ GYVQ
Sbjct: 3 GRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQ 62
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
N +E + L MRE VE ++T+ + ++A A + + +GK H + G+E+++ L
Sbjct: 63 NGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKXSHALAVVNGLELDNIL 122
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
T++L+ Y K G I A VFD + D+V+W +I GY Q G + A+++ +
Sbjct: 123 GTSILNFYCKVGLIDYAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKL 182
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
+ VT+++++S +A+ N +G+ V IR E D + +A VDMYAKC I DA+
Sbjct: 183 KFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKK 242
Query: 403 IFETTSEKDVIAWNSIISGL-DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+F++T +KD+I WN++++ + +S +A+ L + S +
Sbjct: 243 VFDSTVQKDLILWNTLLAAYAESGLSGEALRLF---------------YEMQLESVPPNV 287
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK----NTVTWSAMIGGYGMQGDGGGSL 517
++ N+ + + L N G A+ +F M+ V+W+ M+ G G ++
Sbjct: 288 ITWNLIILSLLRN-----GQVDEAKEMFLQMQSSGIVPTIVSWTTMMNGLVXNGCSEEAI 342
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACS-----HTGMVGEGWKC-----------------F 555
M ++PN T LSAC+ H G G+
Sbjct: 343 HYLRKMQESGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDM 402
Query: 556 YSMCRDF---------KFVPSMKHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLF 603
Y+ C D K + Y M+ A G +EEA+ +E+M I+PD F
Sbjct: 403 YAKCGDISKAEKVFRRKLFSELPLYNAMISAYALYGNVEEAMALYGSLEDMGIKPDNITF 462
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKAC--YYVLVSNLYASDGRWIRVNQVRELM 660
L C + + M+ H K C +Y L+ +L AS G + ++ E M
Sbjct: 463 TNILSACNHAGDINQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEM 521
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 5/127 (3%)
Query: 56 LGLCKSTGSL---KAFHALLIVDGLTNDKCN--TKLVSMYGSFGHVKYARSVFDSMPNPD 110
L C + SL ++ H +I + L + + T LV MY G + A VF +
Sbjct: 364 LSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSE 423
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ MI Y L ++ + Y + + DN F+ +L AC DI++ +++
Sbjct: 424 LPLYNAMISAYALYGNVEEAMALYGSLEDMGIKPDNITFTNILSACNHAGDINQAIEIFS 483
Query: 171 EIVKVGG 177
++V G
Sbjct: 484 DMVSKHG 490
>gi|255541594|ref|XP_002511861.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549041|gb|EEF50530.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 751
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 178/519 (34%), Positives = 285/519 (54%), Gaps = 27/519 (5%)
Query: 169 HCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H ++K+G + V T L+ Y D S ++FD+ L +VV W++M++ V+N
Sbjct: 33 HGFVIKLGFELEVPVRTALIRFYT-LFDFEISLKLFDQKLHNDVVLWSAMVSACVKNAKY 91
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+EG+ F RM E N +T+ S+++AC L L K +HG+ LK + + +L
Sbjct: 92 REGVQHFRRMLNYGTEANHVTVISILSACGHLGGLCFVKEIHGFCLKKVFYSFTVVQNSL 151
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+D Y KCG I + +F+ +C DL+SW +I ++ P +AL +F + + +
Sbjct: 152 MDAYAKCGKIEASFYIFNRICEKDLISWRTVIRICVENECPREALDIFLKMQRSTTEADE 211
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYIFET 406
+ I + AS Q L G H+ + G Y +V AL+ MY K + A +F+
Sbjct: 212 IIIRDTIMASIQAKELKFGLGFHAYIEKNGFSGYVSVGTALLQMYGKFSKFSSAWLVFDQ 271
Query: 407 TSEKDVIAWNSIISGLDDNVSP-----------------DAVTLVSVISACASLGAVQVG 449
+ KD+IAW+++IS P + VT VS++ AC++LGA ++G
Sbjct: 272 LNYKDLIAWSAMISVYARGGKPYDALNIYRQMQSTNEKANEVTFVSLLQACSALGAQELG 331
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
S+H + TK G SSN ++ +AL++ Y K G + + VFD + K+ + WS+MI GY +
Sbjct: 332 ESIHGFITKAGH-SSNAFLNSALIDLYCKFGSVKKGKAVFDEISTKDLICWSSMINGYAL 390
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L F+DMLN +PNE +F +ILS CS G+ EG K FY M ++ P +
Sbjct: 391 NGCGSEALETFADMLNWGFKPNETVFLSILSVCSQCGLEHEGRKWFYYMQEKYRLAPKLS 450
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFD----LGEVMIKK 625
HY CMVDLL+R G +EEAL F++ MP+ PD ++GA L GC SR D + E ++++
Sbjct: 451 HYACMVDLLSRHGHIEEALMFVKKMPVVPDKRIWGAVLAGC--RSRGDGSIEVAEFVVRQ 508
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
+ L P+ YYV + +LYA GRW V ++ +++ ++G
Sbjct: 509 LSALDPENTSYYVTLLDLYAEQGRWKDVERLTKIVDEKG 547
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 227/505 (44%), Gaps = 25/505 (4%)
Query: 65 LKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ A H +I G + T L+ Y F + + +FD + D + M+
Sbjct: 29 ISAAHGFVIKLGFELEVPVRTALIRFYTLF-DFEISLKLFDQKLHNDVVLWSAMVSACVK 87
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH--CEIVKVGGPDSF 181
N Y++ V+ ++ M E ++ +L AC L + ++H C + KV +
Sbjct: 88 NAKYREGVQHFRRMLNYGTEANHVTVISILSACGHLGGLCFVKEIHGFC-LKKVFYSFTV 146
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V L+D YAKC I +S +F+ +K+++SW ++I V+N+C +E L +F +M+
Sbjct: 147 VQNSLMDAYAKCGKIEASFYIFNRICEKDLISWRTVIRICVENECPREALDIFLKMQRST 206
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
E ++I + + A + + L G H YI K G + TALL MY K A
Sbjct: 207 TEADEIIIRDTIMASIQAKELKFGLGFHAYIEKNGFSGYVSVGTALLQMYGKFSKFSSAW 266
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD+L DL++W+AMI Y + G P AL ++ + + N VT S+L A + LG
Sbjct: 267 LVFDQLNYKDLIAWSAMISVYARGGKPYDALNIYRQMQSTNEKANEVTFVSLLQACSALG 326
Query: 362 NLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+G +H + G +N AL+D+Y K + + +F+ S KD+I W+S+I+
Sbjct: 327 AQELGESIHGFITKAGHSSNAFLNSALIDLYCKFGSVKKGKAVFDEISTKDLICWSSMIN 386
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G L+ P+ +S++S C+ G G Y ++ L+
Sbjct: 387 GYALNGCGSEALETFADMLNWGFKPNETVFLSILSVCSQCGLEHEGRKWFYYMQEKYRLA 446
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ +++ ++ G + A M M + W A++ G +GDG +A F
Sbjct: 447 PKLSHYACMVDLLSRHGHIEEALMFVKKMPVVPDKRIWGAVLAGCRSRGDGSIEVAEFVV 506
Query: 523 MLNEEVQP-NEVIFTTILSACSHTG 546
+ P N + T+L + G
Sbjct: 507 RQLSALDPENTSYYVTLLDLYAEQG 531
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 150/320 (46%), Gaps = 20/320 (6%)
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N +TL S++ HG+++K+G E+ + TAL+ Y + + +F
Sbjct: 9 NFVTLVSVIRGLGAFHCQDLISAAHGFVIKLGFELEVPVRTALIRFYT-LFDFEISLKLF 67
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D+ D+V W+AM+ ++ + ++ F NHVT+ S+LSA LG L
Sbjct: 68 DQKLHNDVVLWSAMVSACVKNAKYREGVQHFRRMLNYGTEANHVTVISILSACGHLGGLC 127
Query: 365 MGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
+ +H ++ +TV+ N+L+D YAKC I + YIF EKD+I+W ++I
Sbjct: 128 FVKEIHGFCLKKVFYSFTVVQNSLMDAYAKCGKIEASFYIFNRICEKDLISWRTVIRICV 187
Query: 424 DNVSP-----------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
+N P D + + I A ++ G HAY K G S V
Sbjct: 188 ENECPREALDIFLKMQRSTTEADEIIIRDTIMASIQAKELKFGLGFHAYIEKNG-FSGYV 246
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
VGTALL Y K SA +VFD + K+ + WSAMI Y G +L ++ M +
Sbjct: 247 SVGTALLQMYGKFSKFSSAWLVFDQLNYKDLIAWSAMISVYARGGKPYDALNIYRQMQST 306
Query: 527 EVQPNEVIFTTILSACSHTG 546
+ NEV F ++L ACS G
Sbjct: 307 NEKANEVTFVSLLQACSALG 326
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYA 392
L TD++ PN VT+ SV+ ++ H I+LG E + V AL+ Y
Sbjct: 2 LLTDQR-----PNFVTLVSVIRGLGAFHCQDLISAAHGFVIKLGFELEVPVRTALIRFYT 56
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVS 435
+ +F+ DV+ W++++S L+ + VT++S
Sbjct: 57 LFDFEISLK-LFDQKLHNDVVLWSAMVSACVKNAKYREGVQHFRRMLNYGTEANHVTVIS 115
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
++SAC LG + +H + K+ S V V +L++ YAKCG +++ +F+ + EK
Sbjct: 116 ILSACGHLGGLCFVKEIHGFCLKKVFYSFTV-VQNSLMDAYAKCGKIEASFYIFNRICEK 174
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ ++W +I +L +F M + +E+I + A
Sbjct: 175 DLISWRTVIRICVENECPREALDIFLKMQRSTTEADEIIIRDTIMA 220
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+ VTLVSVI + + S+ H + K G V V TAL+ FY D + +
Sbjct: 8 PNFVTLVSVIRGLGAFHCQDLISAAHGFVIKLG-FELEVPVRTALIRFYT-LFDFEISLK 65
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+FD + V WSAM+ + F MLN + N V +ILSAC H G
Sbjct: 66 LFDQKLHNDVVLWSAMVSACVKNAKYREGVQHFRRMLNYGTEANHVTVISILSACGHLGG 125
Query: 548 VGEGWKCF----YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
+ CF + C F ++D A+ G++E + ++ N E D+
Sbjct: 126 L-----CFVKEIHGFCLKKVFYSFTVVQNSLMDAYAKCGKIEASF-YIFNRICEKDL 176
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 197/635 (31%), Positives = 321/635 (50%), Gaps = 110/635 (17%)
Query: 98 YARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC 157
Y +F+S NP+ + F M+R+Y + +V ++ M+ D FV+ ++K+
Sbjct: 52 YTHLLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAG 111
Query: 158 ELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD--KNVVSW 214
+ G+ H ++K+G G D+FV ++DMYA+ IG +R+VFDE D + V W
Sbjct: 112 -----NGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADW 166
Query: 215 TSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
+M++GY + + + LF+ M E N IT ++VT
Sbjct: 167 NAMVSGYWKWESEGQAQWLFDVM----PERNVITWTAMVTG------------------- 203
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
Y K ++ AR FD + +VSW AM+ GY Q+G ++ L+L
Sbjct: 204 ----------------YAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRL 247
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGN----LNMGRMVHSLGIRLGLEDYTVINALVDM 390
F + A P+ T +V+SA + G+ ++ R +H I+L + V AL+DM
Sbjct: 248 FDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL---NCFVRTALLDM 304
Query: 391 YAKCHVIADARYIFE--------------------------------TTSEKDVIAWNSI 418
YAKC I AR IF+ T ++V+ WNS+
Sbjct: 305 YAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSM 364
Query: 419 ISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
I+G N ++PD VT+VSVISAC LGA+++G+ + + T+
Sbjct: 365 IAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQ 424
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
+ S + A++ Y++CG + A+ VF M ++ V+++ +I G+ G G ++ L
Sbjct: 425 IKLS-ISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLM 483
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
S M ++P+ V F +L+ACSH G++ EG K F S+ +D P++ HY CMVDLL R
Sbjct: 484 STMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESI-KD----PAIDHYACMVDLLGR 538
Query: 581 AGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
G LE+A ME MP+EP ++G+ L+ ++ + +LGE+ K+ EL PD + ++L+
Sbjct: 539 VGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGNFILL 598
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
SN+YAS GRW V ++RE MK+ G+ K+ G S V+
Sbjct: 599 SNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVE 633
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 202/458 (44%), Gaps = 65/458 (14%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T +V+ Y ++ AR FD MP S+ M+ Y N L ++++ + M E
Sbjct: 198 TAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIE 257
Query: 144 HDNFVFSKVLKACCELRD----IDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSS 199
D + V+ AC D +H + +++ + FV T L+DMYAKC IG++
Sbjct: 258 PDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQL---NCFVRTALLDMYAKCGSIGAA 314
Query: 200 RQVFDE---------------------TLD-----------KNVVSWTSMIAGYVQNDCA 227
R++FDE LD +NVV+W SMIAGY QN +
Sbjct: 315 RRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQS 374
Query: 228 QEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ LF M + +++T+ S+++AC L AL G W+ ++ + I+++ A
Sbjct: 375 AMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNA 434
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
++ MY +CG++ DA+ VF E+ + D+VS+ +I G+ G+ +A+ L + K P+
Sbjct: 435 MIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPD 494
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFET 406
VT VL+A + G L GR V ++ Y +VD+ + + DA+ E
Sbjct: 495 RVTFIGVLTACSHAGLLEEGRKVFESIKDPAIDHYA---CMVDLLGRVGELEDAKRTMER 551
Query: 407 TSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
+ P A S+++A V++G A + L N
Sbjct: 552 MP-----------------MEPHAGVYGSLLNASRIHKQVELGEL--AANKLFELEPDNS 592
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMRE---KNTVTWS 501
L N YA G + + +AM++ K T WS
Sbjct: 593 GNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWS 630
>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
Length = 921
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 205/680 (30%), Positives = 333/680 (48%), Gaps = 57/680 (8%)
Query: 43 SFHSLPSIPC-LNLLGLCKSTGSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYAR 100
S SL + C +GLC+ H I G D ++MY G ++ A+
Sbjct: 123 SLASLLKVSCSTGEIGLCRQ------LHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQ 176
Query: 101 SVFD--SMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACC 157
VFD S+ D + +I Y + + +++ F K + + ++ V+ AC
Sbjct: 177 RVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACG 236
Query: 158 ELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
+ G VH I+K G + + LV Y KC ++ + Q+F+ K+VVSW +M
Sbjct: 237 SSGEEKYGAMVHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAM 296
Query: 218 IAGYVQNDCAQEGLVLFNRMR--EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
IA Q + L LF RM E V+ N++T SL++A + L AL G+ +H +I ++
Sbjct: 297 IAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRL 356
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
+E+++ + +L+ Y KC + AR +F+ L D++SW +M+ GY Q+ + +F
Sbjct: 357 SLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIF 416
Query: 336 TDKKWADFFPNHVTIASVLSASAQ----LGNLNMGRMVHSLGIRL---GLEDYTVINALV 388
+ P+ ++ + +A+++ L G+ +H +R G +V NA++
Sbjct: 417 KRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAIL 476
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS----------------P-DAV 431
MYAK + IADA IF+ +D +WN+++ G N P D V
Sbjct: 477 KMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHV 536
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTK----------QGLLSSNVYVGTALLNFYAKCGD 481
+L ++++C L ++Q+G HA K LLS N AL++ Y+KCG
Sbjct: 537 SLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSIN----NALISMYSKCGS 592
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ A VF M K+ +W+AMI G G +L LF M + ++PN+V F +L A
Sbjct: 593 IKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMA 652
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME-----NMPI 596
C+H G+V EG F SM D+ PS++HY CM+DL R+G+ + A +E P
Sbjct: 653 CAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPY 712
Query: 597 EPDV-SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
D+ +L+ L C + DLG K+LEL P+ Y+L++NLYAS G W +
Sbjct: 713 HDDILNLWKVLLGACHASKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIK 772
Query: 656 VRELMKQRGLSKSPGCSLVD 675
VR+ M+ +GL K GCS +D
Sbjct: 773 VRKAMRDKGLRKEVGCSWID 792
Score = 216 bits (549), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 147/490 (30%), Positives = 245/490 (50%), Gaps = 31/490 (6%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
C+ LVS +K A+ +FD+ PN D S+ +I Y + ++ M
Sbjct: 58 CSKFLVSQ-SEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEG 116
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSR 200
+ + F + +LK C +I ++H ++ G G DS + + MY++C + ++
Sbjct: 117 LQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQ 176
Query: 201 QVFDET--LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE-GFVEGNQITLGSLVTACA 257
+VFDET L +++ W S+IA Y+ + C E L LF +M G V ++T S+V AC
Sbjct: 177 RVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACG 236
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
G +HG I+K G+E ++L +L+ Y KCGN++ A +F+ + D+VSW A
Sbjct: 237 SSGEEKYGAMVHGRIIKAGLEA-TNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNA 295
Query: 318 MIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI Q G + AL LF K PN VT S+LSA + L L GR +H+ R
Sbjct: 296 MIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFR 355
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
L LE D ++ N+L+ Y+KC + AR IFE +D+I+WNS+++G + N
Sbjct: 356 LSLEVDTSITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDI 415
Query: 426 --------VSPDAVTLVSVISACA--SLGAV--QVGSSLHAYSTKQGLLSS-NVYVGTAL 472
+ PD+ +L + +A + S G + + G +H Y ++ ++ V A+
Sbjct: 416 FKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAI 475
Query: 473 LNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNE 532
L YAK A +F M+ +++ +W+AM+ GY L +F D+L + +
Sbjct: 476 LKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDH 535
Query: 533 VIFTTILSAC 542
V + +L++C
Sbjct: 536 VSLSILLTSC 545
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 189/367 (51%), Gaps = 23/367 (6%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
++Q+FD +++V+SW+++IA Y + + LF +M ++ N +L SL+
Sbjct: 74 AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE--LCSIDLVSWT 316
+ + LHG+ ++ G ++S + A + MY +CG + DA+ VFDE L ++D++ W
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++I Y G + L+LF P +T ASV++A G G MVH I+
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------- 421
GLE + N+LV Y KC + A +FE S KDV++WN++I+
Sbjct: 254 AGLEATNLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLF 313
Query: 422 -----LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
++ V P+ VT +S++SA + L A++ G +HA+ + L + + +L+ FY
Sbjct: 314 RRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLS-LEVDTSITNSLITFY 372
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+KC + AR +F+ + ++ ++W++M+ GY G +F M+ ++P+ T
Sbjct: 373 SKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLT 432
Query: 537 TILSACS 543
I +A S
Sbjct: 433 IIFNAAS 439
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 145/270 (53%), Gaps = 25/270 (9%)
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
++ A+ +FD + D++SW+A+I Y++ G +A LF PN ++AS+L
Sbjct: 71 LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS--EKDVI 413
S G + + R +H IR G D + A + MY++C V+ DA+ +F+ TS D++
Sbjct: 131 SCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDIL 190
Query: 414 AWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAY 455
WNSII+ + V+P +T SV++AC S G + G+ +H
Sbjct: 191 LWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGR 250
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
K GL ++N++ +L+ FY KCG+ Q A +F+ + K+ V+W+AMI +G+G
Sbjct: 251 IIKAGLEATNLW--NSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGEN 308
Query: 516 SLALFSDMLNEE--VQPNEVIFTTILSACS 543
+L LF ML E VQPN V F ++LSA S
Sbjct: 309 ALGLFRRMLKVEPPVQPNRVTFLSLLSAVS 338
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 17/139 (12%)
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+ A+ +FD ++ ++WSA+I Y G+ + LF M+ E +QPN ++L
Sbjct: 72 KCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVS 131
Query: 543 SHTGMVG-----EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALE-FMENMPI 596
TG +G GW S+ F ++ + + +R G LE+A F E +
Sbjct: 132 CSTGEIGLCRQLHGW----SIRTGFGLDSGIR--AAWITMYSRCGVLEDAQRVFDETSLL 185
Query: 597 EPDVSLFGAFL-----HGC 610
D+ L+ + + HGC
Sbjct: 186 ALDILLWNSIIAAYIFHGC 204
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/583 (30%), Positives = 301/583 (51%), Gaps = 58/583 (9%)
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLD 208
S +L +C +++ + EG ++H I+ +G +L LV Y+ + + + + +
Sbjct: 104 SSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNI 163
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+ W +I+ YV+N Q+ L + +M + + + T S++ AC + L GK +
Sbjct: 164 LHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 223
Query: 269 HGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYP 328
H I I+ + + AL+ MY KCG + AR +FD++ D VSW +MI Y G
Sbjct: 224 HESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMW 283
Query: 329 DKALKLFTDKKWADFFPNHVTIASV----------------------------------- 353
++A +LF WA+ ++ I +
Sbjct: 284 NEAFELF-GSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALII 342
Query: 354 -LSASAQLGNLNMGRMVHSLGIR--LGLEDYTVINALVDMYAKCHVIADARYIFETTSEK 410
L A + +G+ +G+ +HS IR G D TV NAL+ MY++C + A +F+ K
Sbjct: 343 GLGACSHIGDAKLGKEIHSFAIRSCFGEVD-TVKNALITMYSRCKDLKHAYLLFQLMEAK 401
Query: 411 DVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
+I WNSIISG L + P+ VT+ SV+ CA + +Q G H
Sbjct: 402 SLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFH 461
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
Y T++ ++ + AL++ YA+ G AR VFD + E++ +T+++MI GYGMQG+G
Sbjct: 462 CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEG 521
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
+L LF +M N +++P+ + +LSACSH+G+V +G F M + P ++H+ C
Sbjct: 522 QAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFAC 581
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
M DL RAG L +A E + NMP +P +++ + C ++ ++GE +K+LE+ P+
Sbjct: 582 MTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPEN 641
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YYVL++N+YA+ G W ++ +VR M+ G+ K+PGC+ VD+
Sbjct: 642 PGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDV 684
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 224/516 (43%), Gaps = 60/516 (11%)
Query: 51 PCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSM 106
P +LL C SL + H +I G KLV+ Y +F + A + ++
Sbjct: 102 PISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENS 161
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
+ + ++I Y N + + YK M K+ DNF + VLKAC E D+ G
Sbjct: 162 NILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGK 221
Query: 167 KVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+VH I S ++ L+ MY KC +G +R +FD+ +++ VSW SMI+ Y
Sbjct: 222 EVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMG 281
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSL--------------------------------- 252
E LF M +E N I ++
Sbjct: 282 MWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALI 341
Query: 253 --VTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI 310
+ AC+ + GK +H + ++ + AL+ MY +C +++ A +F + +
Sbjct: 342 IGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAK 401
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
L++W ++I G ++A L + PN+VTIASVL A++ NL G+ H
Sbjct: 402 SLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFH 461
Query: 371 S-LGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------ 422
+ R +D+ ++ NALVDMYA+ + +AR +F+ E+D + + S+I+G
Sbjct: 462 CYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEG 521
Query: 423 -----------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
+ + PD +T+++V+SAC+ G V G L L+ ++
Sbjct: 522 QAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFAC 581
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNT-VTWSAMIGG 506
+ + + + G A+ + M K T W+ +IG
Sbjct: 582 MTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGA 617
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 115/514 (22%), Positives = 218/514 (42%), Gaps = 99/514 (19%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
+ SL+++C +++L +G+ LHG+I+ +G E + LV L+ Y + DA + +
Sbjct: 103 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 162
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
+ W +I Y ++G+ KAL + P++ T SVL A + +L G+
Sbjct: 163 ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKE 222
Query: 369 VHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS------ 420
VH I +++I NAL+ MY KC + AR +F+ E+D ++WNS+IS
Sbjct: 223 VHE-SINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMG 281
Query: 421 ---------------GLDDNV---------------SPDAVTLVSVISACAS-------- 442
++ N+ A+ L+S + C S
Sbjct: 282 MWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALI 341
Query: 443 --------LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
+G ++G +H+++ + + V AL+ Y++C D + A ++F M
Sbjct: 342 IGLGACSHIGDAKLGKEIHSFAIRSCFGEVDT-VKNALITMYSRCKDLKHAYLLFQLMEA 400
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMV--GEGW 552
K+ +TW+++I G + L +ML ++PN V ++L C+ + G+ +
Sbjct: 401 KSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEF 460
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA------------------------- 587
C+ + DFK + + +VD+ AR+G++ EA
Sbjct: 461 HCYMTRREDFK--DHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQ 518
Query: 588 ---------LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH--PDKACY 636
E M N I+PD A L C G+++ +KM L+ +
Sbjct: 519 GEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEH 578
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
+ +++L+ GR +N+ +E+++ +P
Sbjct: 579 FACMTDLF---GRAGLLNKAKEIIRNMPYKPTPA 609
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 186/617 (30%), Positives = 308/617 (49%), Gaps = 54/617 (8%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
K +S + GH A VF++MP S+ MI Y N + + + ++ E
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFN----LARNLFDQMPE 108
Query: 144 HDNFVFSKVLKA---CCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSR 200
D F ++ +L C L D + E D L+ YA+ + +R
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPE------KDVVSWNSLLSGYAQNGYVDEAR 162
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VFD +KN +SW ++A YV N +E +LF E + + I+ L+ + +
Sbjct: 163 EVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----ESKSDWDLISWNCLMGGFVRKK 218
Query: 261 ALHQGKWLHGYI-LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L +WL + ++ I N+ ++ Y + G + AR +FDE + D+ +WTAM+
Sbjct: 219 KLGDARWLFDKMPVRDAISWNT-----MISGYAQGGGLSQARRLFDESPTRDVFTWTAMV 273
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFP--NHVTIASVLSASAQLGNLNMGR-MVHSLGIRL 376
GY Q+G D+A F D P N V+ ++++ Q +++ R + S+ R
Sbjct: 274 SGYVQNGMLDEAKTFF------DEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCR- 326
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------- 422
+ + N ++ Y + IA AR F+ ++D ++W +II+G
Sbjct: 327 ---NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFV 383
Query: 423 ---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
D S + T +S CA + A+++G +H + K G + +VG ALL Y KC
Sbjct: 384 EIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY-GTGCFVGNALLAMYFKC 442
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G A F+ + EK+ V+W+ M+ GY G G +L +F M V+P+E+ +L
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACSHTG++ G + FYSM +D+ +P+ KHY CM+DLL RAGRLEEA + + NMP +P
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
+ +GA L ++ +LGE + + ++ P + YVL+SNLYA+ GRW+ +++R
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSK 622
Query: 660 MKQRGLSKSPGCSLVDL 676
M+ G+ K PG S V++
Sbjct: 623 MRDIGVQKVPGYSWVEV 639
>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 193/653 (29%), Positives = 330/653 (50%), Gaps = 44/653 (6%)
Query: 58 LCKSTGSL------KAFHALLIVDGLTNDKC---NTKLVSMYGSFGHVKYARSVFDSMPN 108
+CK+ G+L + H ++ GL + C + L MYG G + AR VFD +P
Sbjct: 179 VCKACGALQWSRFGRGVHGYVVKAGL--EDCVFVASSLADMYGKCGVLDDARKVFDEIPE 236
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ ++ ++ Y N + ++ + + MRK E S L A + ++EG +
Sbjct: 237 RNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 169 HCEIVKVGGP--DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
H I V G D+ + T L++ Y K I + VFD +DK+VV+W +I+GYVQ
Sbjct: 297 HA-IAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQGL 355
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ + + MR ++ + +TL +L++A A+ + L GK + Y ++ E + L +
Sbjct: 356 VENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQCYCIRHSFESDIVLAST 415
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
++DMY KCG+I DA+ VFD DL+ W ++ Y +SG + L+LF + PN
Sbjct: 416 VMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPN 475
Query: 347 HVTIASVLSASAQLGNLNMGR----MVHSLGIRLGLEDYT-VINALVDMYAKCHVIADAR 401
+T ++ + + G ++ + + S GI L +T ++N +V I R
Sbjct: 476 VITWNLIILSLLRNGEVDEAKDMFLQMQSSGIFPNLISWTTMMNGMVQNGCSEEAILFLR 535
Query: 402 YIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ E SGL P+AV++ +SACA+L ++ G S+H Y +
Sbjct: 536 KMQE--------------SGL----RPNAVSITVALSACANLASLHFGRSIHGYIIRNLQ 577
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
SS+V + T+L++ YAKCGD A VF + ++AMI Y + G+ ++AL+
Sbjct: 578 HSSSVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALYR 637
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+ ++P+ + T +LSAC+H G + + M P ++HY MVDLLA A
Sbjct: 638 SLEGVGLKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLASA 697
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G+ ++AL +E MP +PD + + + C + +L + + ++++E PD + YV +S
Sbjct: 698 GQTDKALRLIEEMPYKPDARMIQSLVASCNKQPKSELVDYLSRQLIESEPDNSGNYVTIS 757
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD-------IANDFSFSRV 687
N YA +G W V ++RE+MK +GL K PGCS + + +AND + R+
Sbjct: 758 NAYAVEGSWDEVVKMREIMKAKGLKKKPGCSWIQIKGEGVHVFVANDKTHIRI 810
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 147/496 (29%), Positives = 254/496 (51%), Gaps = 26/496 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C RD+ G ++H I+K G + ++ T LV YAKC + + +F
Sbjct: 72 IYGEILQGCVYERDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDALDIAEVLFT 131
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NV SW ++I + + L+ F M E + + + ++ AC L+
Sbjct: 132 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRF 191
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY++K G+E + ++L DMY KCG + DAR VFDE+ ++V+W A++VGY Q
Sbjct: 192 GRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQ 251
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G ++A++LF+D + P VT+++ LSASA +G + G+ H++ I GLE D +
Sbjct: 252 NGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNIL 311
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDN------------V 426
+L++ Y K +I A +F+ +KDV+ WN IIS GL +N +
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKL 371
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VTL +++SA A +++G + Y + S++ + + +++ YAKCG A+
Sbjct: 372 KYDCVTLATLMSAAARTQNLKLGKEVQCYCIRHS-FESDIVLASTVMDMYAKCGSIVDAK 430
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD+ EK+ + W+ ++ Y G G L LF M E V PN + + I+ + G
Sbjct: 431 KVFDSTAEKDLILWNTLLAAYAESGLSGEGLRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLF 603
V E F M F P++ + M++ + + G EEA+ F+ M + P+
Sbjct: 491 EVDEAKDMFLQMQSSGIF-PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSI 549
Query: 604 GAFLHGCGLYSRFDLG 619
L C + G
Sbjct: 550 TVALSACANLASLHFG 565
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 167/608 (27%), Positives = 293/608 (48%), Gaps = 35/608 (5%)
Query: 66 KAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
K HA ++ +G N+ TKLV Y + A +F + + +S+ +I
Sbjct: 90 KQIHARILKNGDFYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAAIIGVKC 149
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
L + + + M + DNFV V KAC L+ G VH +VK G D F
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVF 209
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L DMY KC + +R+VFDE ++NVV+W +++ GYVQN +E + LF+ MR+
Sbjct: 210 VASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEG 269
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
VE ++T+ + ++A A + + +GK H + G+E+++ L T+LL+ Y K G I A
Sbjct: 270 VEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAE 329
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD + D+V+W +I GY Q G + A+ + + + VT+A+++SA+A+
Sbjct: 330 MVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQ 389
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
NL +G+ V IR E D + + ++DMYAKC I DA+ +F++T+EKD+I WN++
Sbjct: 390 NLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTL-- 447
Query: 421 GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
++A A G G L Y + + NV ++ + G
Sbjct: 448 ----------------LAAYAESGLSGEGLRLF-YGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 481 DAQSARMVFDAMREK----NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+ A+ +F M+ N ++W+ M+ G G ++ M ++PN V T
Sbjct: 491 EVDEAKDMFLQMQSSGIFPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSIT 550
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
LSAC++ + G + R+ + S+ +VD+ A+ G + +A E + +
Sbjct: 551 VALSACANLASLHFGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCGDINKA-EKVFGSKL 609
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKM--LELHPDKACYYVLVSNLYASDGRWIRVN 654
++ L+ A + LY + + + + L PD + ++N+ ++ N
Sbjct: 610 YSELPLYNAMISAYALYGNLKEAIALYRSLEGVGLKPDN----ITITNVLSACNHAGDNN 665
Query: 655 QVRELMKQ 662
Q E++ +
Sbjct: 666 QATEIVTE 673
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 182/501 (36%), Positives = 271/501 (54%), Gaps = 24/501 (4%)
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
GS +++ +DK S A + +E L F RM + + L + + +C
Sbjct: 1270 GSLXSDYEKXIDKERESHCIRPAKHAN---VREALESFXRMNTSGTKPTKFILCTALNSC 1326
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
AKL G +H I++ G E N L +AL+D+Y KC I DA+ VFD + D VSWT
Sbjct: 1327 AKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWT 1386
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL-NMGRMVHSLGIR 375
++I G++++G +A+ F + + PN VT S +SA L + + ++H+ ++
Sbjct: 1387 SIISGFSKNGRGKEAILFFKEMLGSQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVK 1446
Query: 376 LGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS------- 427
LG T V++ L+D Y+KC I A +F TT E+D I +NS+ISG N+
Sbjct: 1447 LGFGVKTFVVSCLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKL 1506
Query: 428 ----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
P TL S+++AC SL +Q G +H+ K G SNV+V +ALL+ Y+
Sbjct: 1507 FVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAKMGS-ESNVFVVSALLDMYS 1565
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFT 536
KCG AR VF EKNTV W++MI GY G G L LF ++ EE P+ + FT
Sbjct: 1566 KCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFT 1625
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L+AC+H G + +G F M RD+ VP + Y C+VDL R G L +A E ME P
Sbjct: 1626 AVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAXPX 1685
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
EP+ ++G+FL C LY +LG K+ ++ P YV ++++YA G W V ++
Sbjct: 1686 EPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVVEI 1745
Query: 657 RELMKQRGLSKSPGCSLVDLD 677
R+LMKQ+GL KS G S V++D
Sbjct: 1746 RKLMKQKGLRKSAGWSWVEVD 1766
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 214/446 (47%), Gaps = 34/446 (7%)
Query: 68 FHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA +I G ++ N+ LV +Y + A+ VFD M D S+ +I + N
Sbjct: 1338 IHARIIQTGFEDNLFLNSALVDLYAKCDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGR 1397
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI-DEGMKVHCEIVKVG-GPDSFVLT 184
K+ + F+K M + + + + AC L I D+ +H +VK+G G +FV++
Sbjct: 1398 GKEAILFFKEMLGSQIKPNCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVS 1457
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+D Y+KC I + +F T++++ + + SMI+GY QN +E L LF MR +
Sbjct: 1458 CLIDCYSKCGRIDQAVLLFGTTIERDNILFNSMISGYSQNLXGEEALKLFVZMRNNGLXP 1517
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
TL S++ AC L L QG+ +H + K+G E N +V+ALLDMY KCG+I +AR VF
Sbjct: 1518 TDHTLTSILNACGSLTILQQGRQVHSLVAKMGSESNVFVVSALLDMYSKCGSIDEARCVF 1577
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNL 363
+ + V WT+MI GY QSG + L LF + F P+H+ +VL+A G L
Sbjct: 1578 XQAVEKNTVLWTSMITGYAQSGRGPEGLGLFERLVXEEGFTPDHICFTAVLTACNHAGFL 1637
Query: 364 NMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+ G +M G+ L+ Y LVD+Y + + A+ + E +
Sbjct: 1638 DKGIDYFNQMRRDYGLVPDLDQYA---CLVDLYVRNGHLRKAKELMEAXPXE-------- 1686
Query: 419 ISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
P++V S +S+C G ++G K S+ YV A+ + YA+
Sbjct: 1687 ---------PNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYV--AMASIYAQ 1735
Query: 479 CGDAQSARMVFDAMREK---NTVTWS 501
G + M++K + WS
Sbjct: 1736 AGLWSEVVEIRKLMKQKGLRKSAGWS 1761
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 297/568 (52%), Gaps = 23/568 (4%)
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDM 189
++ +K + + HD+ +L A D+D G ++H ++K P V L++M
Sbjct: 879 IDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNM 938
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y+K + ++ + F + + +++SW +MI+ Y QN+ E + F + ++ +Q TL
Sbjct: 939 YSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTL 998
Query: 250 GSLVTACA---KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
S++ AC+ + G +H Y +K GI +S + TAL+D+Y K G + +A +
Sbjct: 999 ASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG 1058
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
DL SW A++ GY +S KAL+ F+ + +T+A+ + AS L NL G
Sbjct: 1059 KYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQG 1118
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ + + I+LG D V + ++DMY KC + +A +F S D +AW ++ISG +N
Sbjct: 1119 KQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIEN 1178
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
V PD T ++I A + L A++ G +HA K S + +V
Sbjct: 1179 GDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY-SLDHFV 1237
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
GT+L++ Y KCG Q A VF M + V W+AM+ G G +L LF M + +
Sbjct: 1238 GTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGI 1297
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
QP++V F +LSACSH+G+ E +K F +M + + P ++HY C+VD L RAGR++EA
Sbjct: 1298 QPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAE 1357
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+ +MP + S++ A L C + + + K+L L P + YVL+SN+YA+
Sbjct: 1358 NVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASR 1417
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W V R +MK + + K PG S +D+
Sbjct: 1418 QWDDVTDARNMMKLKNVKKDPGFSWIDV 1445
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 232/473 (49%), Gaps = 26/473 (5%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HAL+I + L++MY G V A F + P D S+ MI Y N
Sbjct: 914 EQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQN 973
Query: 125 DLYKD-IVEFYKCMRKRLKEHDNFVFSKVLKACC---ELRDIDEGMKVHCEIVKVG-GPD 179
+L + I F +R LK D F + VL+AC E G +VH +K G D
Sbjct: 974 NLEMEAICTFRDLLRDGLKP-DQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIND 1032
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
SFV T L+D+Y+K + + + D ++ SW +++ GY++++ +++ L F+ M E
Sbjct: 1033 SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
+ ++ITL + + A L L QGK + Y +K+G + + + +LDMY+KCG++ +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A +F E+ D V+WT MI GY ++G D AL ++ + + P+ T A+++ AS+
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L L G+ +H+ ++L D+ V +LVDMY KC + DA +F + V+ WN++
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 419 ISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ GL + + PD VT + V+SAC+ G K
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMIGGYGMQGDG 513
++ + + L++ + G Q A V +M K + + + A++G +GD
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDA 1385
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 142/585 (24%), Positives = 250/585 (42%), Gaps = 62/585 (10%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV++Y +G V AR +FD MP D + VM++ Y N + + F+ H
Sbjct: 758 LVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAF------HR 811
Query: 146 NFVFSKVLKACCEL----RDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ F C + D+ K H E VK F D GS
Sbjct: 812 SGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPF-----------DQGS--- 857
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
N+ +W + ++ + F + + + +TL +++A
Sbjct: 858 --------NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADD 909
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L G+ +H ++K + +L++MY K G + A F +DL+SW MI
Sbjct: 910 LDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISS 969
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA--SAQLGN-LNMGRMVHSLGIRLG- 377
Y Q+ +A+ F D P+ T+ASVL A + G +G VH I+ G
Sbjct: 970 YAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGI 1029
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------------- 422
+ D V AL+D+Y+K + +A ++ + D+ +WN+I+ G
Sbjct: 1030 INDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSL 1089
Query: 423 --DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ + D +TL + I A L ++ G + AY+ K G +++++V + +L+ Y KCG
Sbjct: 1090 MHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG-FNNDLWVSSGVLDMYIKCG 1148
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
D +A +F + + V W+ MI GY GD +L+++ M VQP+E F T++
Sbjct: 1149 DMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIK 1208
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEP 598
A S + +G + ++ K S+ H+V +VD+ + G +++A M +
Sbjct: 1209 ASSCLTALEQGKQIHANVV---KLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK 1265
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
V + A L G + D + + M + PDK + ++S
Sbjct: 1266 -VVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLS 1309
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 229/493 (46%), Gaps = 75/493 (15%)
Query: 154 KACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
++ + D+ G + H IV G PD ++ L+ MY+KC + S+RQVFD++ D+++V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 213 SWTSMIAGYVQ-----NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+W S++A Y Q + EG LF +RE ++TL L+ C + +
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HGY +KIG E++ + AL+++Y K G + AR +FD++ D V W M+ Y ++ +
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINAL 387
D+AL+ F+ + FFP+ + V+ +N+
Sbjct: 799 QDEALRFFSAFHRSGFFPDFSNLHCVIGG---------------------------VNSD 831
Query: 388 VDMYAKCH---VIADARYIFETTSEKDVIAWN----------SIISGLD-------DNVS 427
V K H V A A +F ++ AWN I++ +D +
Sbjct: 832 VSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
D+VTLV ++SA + +G +HA K + V V +L+N Y+K G +A
Sbjct: 892 HDSVTLVIILSAAVGADDLDLGEQIHALVIKSS-FAPVVPVSNSLMNMYSKAGVVYAAEK 950
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F E + ++W+ MI Y ++ F D+L + ++P++ ++L ACS TG
Sbjct: 951 TFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS-TGD 1009
Query: 548 VGE-----------GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
GE KC + D FV + ++DL ++ G+++EA EF+ +
Sbjct: 1010 EGEYFTLGSQVHVYAIKC--GIIND-SFVST-----ALIDLYSKGGKMDEA-EFLLHGKY 1060
Query: 597 EPDVSLFGAFLHG 609
+ D++ + A + G
Sbjct: 1061 DFDLASWNAIMFG 1073
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 225/510 (44%), Gaps = 66/510 (12%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY--F 122
K HA ++ G D+ L++MY G + AR VFD + D ++ ++ Y F
Sbjct: 631 KRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQF 690
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM-----KVHCEIVKVGG 177
+ Y++++E ++ L+E F +++ A + G VH VK+G
Sbjct: 691 ADSSYENVLEGFRLF-GLLREF-GFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 178 P-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D FV LV++Y K +G +R +FD+ +++ V W M+ YV+N E L F+
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 237 M-REGF---VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
R GF +G + + + R H + + Y +K+
Sbjct: 809 FHRSGFFPDFSNLHCVIGGVNSDVSNNRKRH-AEQVKAYAMKM----------------- 850
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
FD+ +I +W + + +G A+ F + + VT+
Sbjct: 851 ---------FPFDQGSNI--FAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKD 411
+LSA+ +L++G +H+L I+ V N+L++MY+K V+ A F + E D
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 412 VIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQ---VGSS 451
+I+WN++IS L D + PD TL SV+ AC++ + +GS
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+H Y+ K G+++ + +V TAL++ Y+K G A + + + +W+A++ GY
Sbjct: 1020 VHVYAIKCGIINDS-FVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+L FS M + +E+ T + A
Sbjct: 1079 KSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 156/349 (44%), Gaps = 17/349 (4%)
Query: 39 QTFASFHSLPSIPC--LNLLGLCKSTGSL------KAFHALLIVDGLTNDK-CNTKLVSM 89
+ F+ H + IP + L K++G L K A I G ND ++ ++ M
Sbjct: 1085 EHFSLMHEM-GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDM 1143
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G + A +F + PD ++ MI Y N + Y MR + D + F
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTF 1203
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ ++KA L +++G ++H +VK+ D FV T LVDMY KC + + +VF +
Sbjct: 1204 ATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV 1263
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KW 267
+ VV W +M+ G Q+ E L LF M+ ++ +++T +++AC+ + K+
Sbjct: 1264 RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKY 1323
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
GI + L+D + G I++A +V + S ++G ++
Sbjct: 1324 FDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKG 1383
Query: 328 PDKALKLFTDKKWADFFPN----HVTIASVLSASAQLGNLNMGRMVHSL 372
+ K DK A P+ +V ++++ +AS Q ++ R + L
Sbjct: 1384 DAETAKRVADKLLA-LDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 176/561 (31%), Positives = 299/561 (53%), Gaps = 43/561 (7%)
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCR--DIGSSRQ 201
H N + S +L C +R E+ K+ G +L+ L+D DI ++
Sbjct: 3 HQNTILS-LLARCKSMR----------ELKKLRG---LILSKLIDFCVDSXFGDINNADL 48
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF + +V W SMI G+V N + ++L+ ++ E + T ++ AC +
Sbjct: 49 VFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIAD 108
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
GK +H I+K G E +++ T LL MYV C +++ VFD + ++V+WT +I G
Sbjct: 109 QDCGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAG 168
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
Y + P +ALK+F D PN +T+ + L A+ + + G+ VH + G + +
Sbjct: 169 YVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPF 228
Query: 382 --------TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD--------- 424
+ A+++MYAKC AR +F ++++++WNS+I+ +
Sbjct: 229 MSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALD 288
Query: 425 --------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ PD T +SV+S CA L A+ +G ++HAY K G+ +++ + TALL+ Y
Sbjct: 289 LFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKTGI-GTDISLATALLDMY 347
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIF 535
AK G SA+ +F ++++++ V W++MI G M GDG +L +F M + + P+ + +
Sbjct: 348 AKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHITY 407
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+L ACSH G+V E K F M + VP +HY CMVDLL+R+G EA ME M
Sbjct: 408 IGVLFACSHVGLVEEAKKHFRLMTEMYSIVPGREHYGCMVDLLSRSGHFGEAERLMETMA 467
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
I+P++S+ GA L+GC ++ + + +++ EL ++ +VL+SN+YA GRW VN
Sbjct: 468 IQPNISIXGALLYGCQIHENLXVANQVKERLTELESCQSGAHVLLSNIYAKAGRWEDVNG 527
Query: 656 VRELMKQRGLSKSPGCSLVDL 676
R++MK + ++K G S V++
Sbjct: 528 TRKVMKHKRITKIIGHSSVEM 548
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/424 (34%), Positives = 225/424 (53%), Gaps = 39/424 (9%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVS--MYGSFGHVKYARSVFDSMPNPD 110
L+LL CKS LK L++ +KL+ + FG + A VF + P
Sbjct: 8 LSLLARCKSMRELKKLRGLIL----------SKLIDFCVDSXFGDINNADLVFRQIDAPS 57
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
Y + MIR + N + + Y+ + + D+F F VLKACC + D D G +HC
Sbjct: 58 VYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIADQDCGKCIHC 117
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
IVK G D++ TGL+ MY C D+ S +VFD NVV+WT +IAGYV N+ E
Sbjct: 118 CIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGYVNNNQPYE 177
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI-----NSHLV 284
L +F M VE N+IT+ + + CA+ R G+W+H +I K G + NS+++
Sbjct: 178 ALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPFMSTSNSNII 237
Query: 285 --TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
TA+L+MY KCG+ + AR +F+++ ++VSW +MI Y Q +AL LF D +
Sbjct: 238 LATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTSG 297
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADAR 401
+P+ T SVLS A L L +G+ VH+ + G+ D ++ AL+DMYAK + A+
Sbjct: 298 IYPDKATFLSVLSVCAHLCALALGQTVHAYLXKTGIGTDISLATALLDMYAKTGGLGSAQ 357
Query: 402 YIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTLVSVISACASL 443
IF + ++DV+ W S+I+GL D ++ PD +T + V+ AC+ +
Sbjct: 358 KIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACSHV 417
Query: 444 GAVQ 447
G V+
Sbjct: 418 GLVE 421
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 194/664 (29%), Positives = 324/664 (48%), Gaps = 67/664 (10%)
Query: 38 DQTFASFHSLPSIPCLNLLGLCKSTGSL------KAFHALLIVDGLTNDKC---NTKLVS 88
D+ F +P++ CK+ G+L + H + GL D C + L
Sbjct: 123 DEIFPDNFVVPNV--------CKACGALQWRGFGRGVHGYVAKSGL--DDCVFVASSLAD 172
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MYG G + AR VFD +P + ++ ++ Y N + ++ + MR+ E
Sbjct: 173 MYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVT 232
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
S L A + ++EG + H V G D+ + T +++ Y K + + VFD +
Sbjct: 233 VSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRMV 292
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
K+VV+W +I+GYVQ ++ + + MR ++ + +TL +L++ A+ + GK
Sbjct: 293 GKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKE 352
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+ Y ++ E + L + +DMY KCG+I DA+ VFD DL+ W ++ Y +SG
Sbjct: 353 VQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGL 412
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINAL 387
+AL+LF + + PN +T ++ L++ R N
Sbjct: 413 SGEALRLFYEMQLESVPPNVITWNLII--------LSLLR-----------------NGQ 447
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDA 430
VD K + + I T +++W ++++GL N + P+
Sbjct: 448 VDEAKKMFLQMQSSGIVPT-----IVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNV 502
Query: 431 VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFD 490
++ +SACA+L ++ G S+H Y + L SS+V + T+L++ YAKCGD A VF
Sbjct: 503 FSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFR 562
Query: 491 AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGE 550
++AMI Y + G+ ++AL+ + + ++P+ + FT ILSAC+H G + +
Sbjct: 563 RKLFSELPLYNAMISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQ 622
Query: 551 GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC 610
+ F M P ++HY MVDLLA AG E+AL ME MP EPD + + L C
Sbjct: 623 AIEIFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEMPYEPDARMIQSLLATC 682
Query: 611 GLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPG 670
+ +L E + K++LE PD + YV +SN YA +G W V ++RE+MK +GL K PG
Sbjct: 683 NKEHKTELVEYLSKQLLESEPDNSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKQPG 742
Query: 671 CSLV 674
CS +
Sbjct: 743 CSWI 746
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 150/548 (27%), Positives = 272/548 (49%), Gaps = 31/548 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C RD G ++H I+K G + ++ T LV YAKC + + +F
Sbjct: 28 IYGEILQGCVYERDFHTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEIAEVLFS 87
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NV SW ++I + + L+ F M + + + + ++ AC L+
Sbjct: 88 KLRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWRGF 147
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY+ K G++ + ++L DMY KCG + DAR VFDE+ ++V+W A++VGY Q
Sbjct: 148 GRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQ 207
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G ++A++L D + P VT+++ LSASA +G + G+ H+L + GLE D +
Sbjct: 208 NGMNEEAIRLMCDMREEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNIL 267
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDDNVSP--------- 428
++++ Y K ++ A +F+ KDV+ WN +ISG ++D +
Sbjct: 268 GTSVLNFYCKVGLVEYAEMVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKL 327
Query: 429 --DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VTL +++S A ++G + Y + S V TA ++ YAKCG A+
Sbjct: 328 KFDCVTLSTLMSTAARTQNSKLGKEVQCYCIRHSFESDIVLASTA-VDMYAKCGSIVDAK 386
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD+ +K+ + W+ ++ Y G G +L LF +M E V PN + + I+ + G
Sbjct: 387 KVFDSTVQKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 446
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLF 603
V E K F M + VP++ + M++ L + G EEA+ ++ M + P+V
Sbjct: 447 QVDEAKKMFLQM-QSSGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSI 505
Query: 604 GAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
L C + G + ++ LH + ++YA G +++ ++ +
Sbjct: 506 TVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCG---DISKAEKVFR 562
Query: 662 QRGLSKSP 669
++ S+ P
Sbjct: 563 RKLFSELP 570
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 172/641 (26%), Positives = 292/641 (45%), Gaps = 66/641 (10%)
Query: 66 KAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+ HA ++ +G N+ TKLV Y ++ A +F + + +S+ +I
Sbjct: 46 QQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 105
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
L + + + M K DNFV V KAC L+ G VH + K G D F
Sbjct: 106 RMGLVEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVF 165
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L DMY KC + +R+VFDE ++NVV+W +++ GYVQN +E + L MRE
Sbjct: 166 VASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEG 225
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
VE ++T+ + ++A A + + +GK H + G+E+++ L T++L+ Y K G + A
Sbjct: 226 VEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAE 285
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD + D+V+W +I GY Q G + A+++ + + VT+++++S +A+
Sbjct: 286 MVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQ 345
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
N +G+ V IR E D + + VDMYAKC I DA+ +F++T +KD+I WN++++
Sbjct: 346 NSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLA 405
Query: 421 GL-DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ +S +A+ L + S +++ N+ + + L N
Sbjct: 406 AYAESGLSGEALRLF---------------YEMQLESVPPNVITWNLIILSLLRN----- 445
Query: 480 GDAQSARMVFDAMREK----NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
G A+ +F M+ V+W+ M+ G G ++ M ++PN
Sbjct: 446 GQVDEAKKMFLQMQSSGIVPTIVSWTTMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSI 505
Query: 536 TTILSACS-----HTGMVGEGWKC-----------------FYSMCRDF---------KF 564
T LSAC+ H G G+ Y+ C D K
Sbjct: 506 TVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKL 565
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
+ Y M+ A G +EEA+ +++M I+PD F L C +
Sbjct: 566 FSELPLYNAMISAYALYGNVEEAMALYRSLDDMGIKPDNITFTNILSACNHAGDINQAIE 625
Query: 622 MIKKMLELHPDKAC--YYVLVSNLYASDGRWIRVNQVRELM 660
+ M+ H K C +Y L+ +L AS G + ++ E M
Sbjct: 626 IFSDMVSKHGVKPCLEHYGLMVDLLASAGETEKALRLMEEM 666
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 297/568 (52%), Gaps = 23/568 (4%)
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDM 189
++ +K + + HD+ +L A D+D G ++H ++K P V L++M
Sbjct: 879 IDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNM 938
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y+K + ++ + F + + +++SW +MI+ Y QN+ E + F + ++ +Q TL
Sbjct: 939 YSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTL 998
Query: 250 GSLVTACA---KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
S++ AC+ + G +H Y +K GI +S + TAL+D+Y K G + +A +
Sbjct: 999 ASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHG 1058
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
DL SW A++ GY +S KAL+ F+ + +T+A+ + AS L NL G
Sbjct: 1059 KYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQG 1118
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+ + + I+LG D V + ++DMY KC + +A +F S D +AW ++ISG +N
Sbjct: 1119 KQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIEN 1178
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
V PD T ++I A + L A++ G +HA K S + +V
Sbjct: 1179 GDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDY-SLDHFV 1237
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
GT+L++ Y KCG Q A VF M + V W+AM+ G G +L LF M + +
Sbjct: 1238 GTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGI 1297
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
QP++V F +LSACSH+G+ E +K F +M + + P ++HY C+VD L RAGR++EA
Sbjct: 1298 QPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAE 1357
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+ +MP + S++ A L C + + + K+L L P + YVL+SN+YA+
Sbjct: 1358 NVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASR 1417
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+W V R +MK + + K PG S +D+
Sbjct: 1418 QWDDVTDARNMMKLKNVKKDPGFSWIDV 1445
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 232/473 (49%), Gaps = 26/473 (5%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ HAL+I + L++MY G V A F + P D S+ MI Y N
Sbjct: 914 EQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQN 973
Query: 125 DLYKD-IVEFYKCMRKRLKEHDNFVFSKVLKACC---ELRDIDEGMKVHCEIVKVG-GPD 179
+L + I F +R LK D F + VL+AC E G +VH +K G D
Sbjct: 974 NLEMEAICTFRDLLRDGLKP-DQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIND 1032
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
SFV T L+D+Y+K + + + D ++ SW +++ GY++++ +++ L F+ M E
Sbjct: 1033 SFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHE 1092
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
+ ++ITL + + A L L QGK + Y +K+G + + + +LDMY+KCG++ +
Sbjct: 1093 MGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPN 1152
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A +F E+ D V+WT MI GY ++G D AL ++ + + P+ T A+++ AS+
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L L G+ +H+ ++L D+ V +LVDMY KC + DA +F + V+ WN++
Sbjct: 1213 LTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAM 1272
Query: 419 ISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ GL + + PD VT + V+SAC+ G K
Sbjct: 1273 LLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYG 1332
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMIGGYGMQGDG 513
++ + + L++ + G Q A V +M K + + + A++G +GD
Sbjct: 1333 ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDA 1385
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 141/581 (24%), Positives = 249/581 (42%), Gaps = 54/581 (9%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV++Y +G V AR +FD MP D + VM++ Y N + + F+ + D
Sbjct: 758 LVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPD 817
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
V+ D+ K H E VK F D GS
Sbjct: 818 FSNLHCVIGGVNS--DVSNNRKRHAEQVKAYAMKMFPF-----------DQGS------- 857
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
N+ +W + ++ + F + + + +TL +++A L G
Sbjct: 858 ----NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLG 913
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQS 325
+ +H ++K + +L++MY K G + A F +DL+SW MI Y Q+
Sbjct: 914 EQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQN 973
Query: 326 GYPDKALKLFTDKKWADFFPNHVTIASVLSA--SAQLGN-LNMGRMVHSLGIRLG-LEDY 381
+A+ F D P+ T+ASVL A + G +G VH I+ G + D
Sbjct: 974 NLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDS 1033
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DD 424
V AL+D+Y+K + +A ++ + D+ +WN+I+ G +
Sbjct: 1034 FVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEM 1093
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ D +TL + I A L ++ G + AY+ K G +++++V + +L+ Y KCGD +
Sbjct: 1094 GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLG-FNNDLWVSSGVLDMYIKCGDMPN 1152
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A +F + + V W+ MI GY GD +L+++ M VQP+E F T++ A S
Sbjct: 1153 ALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSC 1212
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+ +G + ++ K S+ H+V +VD+ + G +++A M + V
Sbjct: 1213 LTALEQGKQIHANVV---KLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRK-VVF 1268
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVS 641
+ A L G + D + + M + PDK + ++S
Sbjct: 1269 WNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLS 1309
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 228/493 (46%), Gaps = 75/493 (15%)
Query: 154 KACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
++ + D+ G + H IV G PD ++ L+ MY+KC + S+RQVFD++ D+++V
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 213 SWTSMIAGYVQ-----NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+W S++A Y Q + EG LF +RE ++TL L+ C + +
Sbjct: 679 TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HGY +KIG E++ + AL+++Y K G + AR +FD++ D V W M+ Y ++ +
Sbjct: 739 VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINAL 387
D+AL+ F+ + F P+ + V+ +N+
Sbjct: 799 QDEALRFFSAFHRSGFXPDFSNLHCVIGG---------------------------VNSD 831
Query: 388 VDMYAKCH---VIADARYIFETTSEKDVIAWN----------SIISGLD-------DNVS 427
V K H V A A +F ++ AWN I++ +D +
Sbjct: 832 VSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIG 891
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
D+VTLV ++SA + +G +HA K + V V +L+N Y+K G +A
Sbjct: 892 HDSVTLVIILSAAVGADDLDLGEQIHALVIKSS-FAPVVPVSNSLMNMYSKAGVVYAAEK 950
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F E + ++W+ MI Y ++ F D+L + ++P++ ++L ACS TG
Sbjct: 951 TFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS-TGD 1009
Query: 548 VGE-----------GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
GE KC + D FV + ++DL ++ G+++EA EF+ +
Sbjct: 1010 EGEYFTLGSQVHVYAIKC--GIIND-SFVST-----ALIDLYSKGGKMDEA-EFLLHGKY 1060
Query: 597 EPDVSLFGAFLHG 609
+ D++ + A + G
Sbjct: 1061 DFDLASWNAIMFG 1073
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 225/510 (44%), Gaps = 66/510 (12%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY--F 122
K HA ++ G D+ L++MY G + AR VFD + D ++ ++ Y F
Sbjct: 631 KRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYAQF 690
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM-----KVHCEIVKVGG 177
+ Y++++E ++ L+E F +++ A + G VH VK+G
Sbjct: 691 ADSSYENVLEGFRLF-GLLREF-GFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748
Query: 178 P-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D FV LV++Y K +G +R +FD+ +++ V W M+ YV+N E L F+
Sbjct: 749 ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSA 808
Query: 237 M-REGFV---EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
R GF +G + + + R H + + Y +K+
Sbjct: 809 FHRSGFXPDFSNLHCVIGGVNSDVSNNRKRH-AEQVKAYAMKM----------------- 850
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
FD+ +I +W + + +G A+ F + + VT+
Sbjct: 851 ---------FPFDQGSNI--FAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVI 899
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKD 411
+LSA+ +L++G +H+L I+ V N+L++MY+K V+ A F + E D
Sbjct: 900 ILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD 959
Query: 412 VIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQ---VGSS 451
+I+WN++IS L D + PD TL SV+ AC++ + +GS
Sbjct: 960 LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQ 1019
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
+H Y+ K G+++ + +V TAL++ Y+K G A + + + +W+A++ GY
Sbjct: 1020 VHVYAIKCGIINDS-FVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+L FS M + +E+ T + A
Sbjct: 1079 KSRKALEHFSLMHEMGIPIDEITLATAIKA 1108
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 156/349 (44%), Gaps = 17/349 (4%)
Query: 39 QTFASFHSLPSIPC--LNLLGLCKSTGSL------KAFHALLIVDGLTNDK-CNTKLVSM 89
+ F+ H + IP + L K++G L K A I G ND ++ ++ M
Sbjct: 1085 EHFSLMHEM-GIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDM 1143
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G + A +F + PD ++ MI Y N + Y MR + D + F
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTF 1203
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ ++KA L +++G ++H +VK+ D FV T LVDMY KC + + +VF +
Sbjct: 1204 ATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDV 1263
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KW 267
+ VV W +M+ G Q+ E L LF M+ ++ +++T +++AC+ + K+
Sbjct: 1264 RKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKY 1323
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
GI + L+D + G I++A +V + S ++G ++
Sbjct: 1324 FDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKG 1383
Query: 328 PDKALKLFTDKKWADFFPN----HVTIASVLSASAQLGNLNMGRMVHSL 372
+ K DK A P+ +V ++++ +AS Q ++ R + L
Sbjct: 1384 DAETAKRVADKLLA-LDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKL 1431
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 186/617 (30%), Positives = 308/617 (49%), Gaps = 54/617 (8%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
K +S + GH A VF++MP S+ MI Y N + + + ++ E
Sbjct: 53 NKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFN----LARNLFDQMPE 108
Query: 144 HDNFVFSKVLKA---CCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSR 200
D F ++ +L C L D + E D L+ YA+ + +R
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPE------KDVVSWNSLLSGYAQNGYVDEAR 162
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+VFD +KN +SW ++A YV N +E +LF E + + I+ L+ + +
Sbjct: 163 EVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----ESKSDWDLISWNCLMGGFVRKK 218
Query: 261 ALHQGKWLHGYI-LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L +WL + ++ I N+ ++ Y + G + AR +FDE + D+ +WTAM+
Sbjct: 219 KLGDARWLFDKMPVRDAISWNT-----MISGYAQGGGLSQARRLFDESPTRDVFTWTAMV 273
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFP--NHVTIASVLSASAQLGNLNMGR-MVHSLGIRL 376
GY Q+G D+A F D P N V+ ++++ Q +++ R + S+ R
Sbjct: 274 SGYVQNGMLDEAKTFF------DEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCR- 326
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------------- 422
+ + N ++ Y + IA AR F+ ++D ++W +II+G
Sbjct: 327 ---NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFV 383
Query: 423 ---DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
D S + T +S CA + A+++G +H + K G + +VG ALL Y KC
Sbjct: 384 EIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGY-GTGCFVGNALLAMYFKC 442
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G A F+ + EK+ V+W+ M+ GY G G +L +F M V+P+E+ +L
Sbjct: 443 GSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVL 502
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
SACSHTG++ G + FYSM +D+ +P+ KHY CM+DLL RAGRLEEA + + NMP +P
Sbjct: 503 SACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPG 562
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
+ +GA L ++ +LGE + + ++ P + YVL+SNLYA+ GRW+ +++R
Sbjct: 563 AASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSK 622
Query: 660 MKQRGLSKSPGCSLVDL 676
M+ G+ K PG S V++
Sbjct: 623 MRDIGVQKVPGYSWVEV 639
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 17/91 (18%)
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
+TG++ G + FY M ++ P+ KHY CM+DLL R RLEE
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
GA L ++ +LGE + ++ P +
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNS 849
>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 679
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 297/562 (52%), Gaps = 45/562 (8%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV+ YG + VFD + D S+ +I + ++ +E ++ M E
Sbjct: 119 LVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPS 178
Query: 146 NFVFSKVLKACCELRD---IDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
+F + AC LR + G ++H + G +F L+ MYA + ++ +
Sbjct: 179 SFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTFTNNALMTMYANLGRLDDAKFL 238
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F D+N++SW +MI+ + QN+ E L+ M V+ + +TL S++ AC+ L L
Sbjct: 239 FKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEML 298
Query: 263 HQGKWLHGYILKIGIEI-NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
GK +H Y L+ G I NS + +AL+DMY CG + R VFD + W AMI G
Sbjct: 299 GTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAG 358
Query: 322 YTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
Y Q+ + +KAL LF + A PN T+AS++ ASA+ + +H I+ LE
Sbjct: 359 YAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRDLER 418
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------DDNV------- 426
D V NAL+DMY++ + ++ IF++ +D+++WN++I+G +D +
Sbjct: 419 DRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQ 478
Query: 427 -----------------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVG 469
P+++TL++V+ CASL A+ G +HAY+ + L +S V VG
Sbjct: 479 HANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNAL-ASEVTVG 537
Query: 470 TALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE--- 526
+AL++ YAKCG +R VFD M KN +TW+ ++ YGM G+G +L LF DM+ +
Sbjct: 538 SALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDN 597
Query: 527 --EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
EV+P EV IL+ACSH+GMV EG K F+ M D P HY C+ DLL RAG++
Sbjct: 598 VGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHYACVADLLGRAGKV 657
Query: 585 EEALEFMENMPIEPD---VSLF 603
E+A +F+ MP + D VSLF
Sbjct: 658 EQAYDFINTMPSDFDKLFVSLF 679
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 146/536 (27%), Positives = 254/536 (47%), Gaps = 45/536 (8%)
Query: 118 IRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG 177
+R+ ++L+++ + Y M D++ F VLKA L+D++ G ++H +VK G
Sbjct: 49 LRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGY 108
Query: 178 PDSFV--LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
S V LV+ Y KC ++ +VFD ++++VSW S+I+ + + + L F
Sbjct: 109 ESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFR 168
Query: 236 RMREGFVEGNQITLGSLVTACAKLR---ALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
M +E + TL S V AC+ LR L GK +HGY + G ++ AL+ MY
Sbjct: 169 FMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNG-HWSTFTNNALMTMYA 227
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
G + DA+ +F +L+SW MI ++Q+ +AL P+ VT+AS
Sbjct: 228 NLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLAS 287
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSEK 410
VL A + L L G+ +H+ +R G +E+ V +ALVDMY C + R +F+ E+
Sbjct: 288 VLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILER 347
Query: 411 DVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSL 452
WN++I+G N + P+ T+ S++ A A + S+
Sbjct: 348 KTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESI 407
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
H Y K+ L + YV AL++ Y++ + ++ +FD+M ++ V+W+ MI GY + G
Sbjct: 408 HGYVIKRD-LERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGC 466
Query: 513 GGGSLALFSDM--LNEEV-----------QPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
+L + +M NE + +PN + T+L C+ + +G +
Sbjct: 467 YNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAV 526
Query: 560 RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP----DVSLFGAFLHGCG 611
R+ + +VD+ A+ G L + + MPI+ +V + +HG G
Sbjct: 527 RN-ALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNG 581
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 205/431 (47%), Gaps = 33/431 (7%)
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
++ SW + +++ +E + + M V + ++ A L+ L+ GK +
Sbjct: 40 RSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQI 99
Query: 269 HGYILKIGIEINS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
H +++K G E +S + +L++ Y KC + D VFD + DLVSW ++I + ++
Sbjct: 100 HAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQE 159
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN---LNMGRMVHSLGIRLGLEDYTVI 384
+ AL+ F D P+ T+ S + A + L L +G+ +H R G
Sbjct: 160 WELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTFTN 219
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
NAL+ MYA + DA+++F+ ++++I+WN++IS N V
Sbjct: 220 NALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVK 279
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
PD VTL SV+ AC+ L + G +HAY+ + G L N +VG+AL++ Y CG S R
Sbjct: 280 PDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRR 339
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN-EEVQPNEVIFTTILSACSH-T 545
VFD + E+ T W+AMI GY +L LF +M+ + PN +I+ A +
Sbjct: 340 VFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCE 399
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVS-- 601
+ Y + RD + YV ++D+ +R ++E + ++M + VS
Sbjct: 400 SFFSKESIHGYVIKRDLE----RDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWN 455
Query: 602 --LFGAFLHGC 610
+ G + GC
Sbjct: 456 TMITGYVISGC 466
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 175/378 (46%), Gaps = 29/378 (7%)
Query: 47 LPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSM 106
LP+ L +LG TG +AL D + N + LV MY + G V R VFD +
Sbjct: 289 LPACSYLEMLG----TGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGI 344
Query: 107 PNPDFYSFQVMIRWYFLNDL-YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+ MI Y N+ K ++ F + + + + ++ A
Sbjct: 345 LERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSK 404
Query: 166 MKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H ++K D +V L+DMY++ R + S+ +FD +++VSW +MI GYV +
Sbjct: 405 ESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVIS 464
Query: 225 DCAQEGLVLFNRM-------------REGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
C + L++ + M ++ + N ITL +++ CA L AL +GK +H Y
Sbjct: 465 GCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAY 524
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
++ + + +AL+DMY KCG + +R VFD++ ++++W +++ Y G ++A
Sbjct: 525 AVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEA 584
Query: 332 LKLFTD-----KKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDY 381
L+LF D + P VT+ ++L+A + G ++ G RM GI G + Y
Sbjct: 585 LELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKDDHGIEPGPDHY 644
Query: 382 TVINALVDMYAKCHVIAD 399
+ L+ K D
Sbjct: 645 ACVADLLGRAGKVEQAYD 662
>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
Length = 1026
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 326/627 (51%), Gaps = 28/627 (4%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
++ H ++I GL + LVSMY G + + +F + + MI Y +N
Sbjct: 362 ESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVN 421
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF--V 182
+ + ++ + M+ D V+ C +D+ +H V+ +S+ V
Sbjct: 422 NEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVR-NRFESYQSV 480
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ L+ MYA C DI +S +F + + ++SW +MI+G+ + ++ L LF +M V
Sbjct: 481 MNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEV 540
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ +TL L+++ + G+ +H +K G + L AL+ MY CG + +
Sbjct: 541 WFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQ 600
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA-SAQLG 361
+F+ CS + +++ A++ GY ++ +K L LFT D PN VT+ ++L +QL
Sbjct: 601 LFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQSQL- 659
Query: 362 NLNMGRMVHSLGIR-LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
G+ +HS +R + + + + MY++ + I R IF S +++I WN+ +S
Sbjct: 660 ---QGKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVSARNLIVWNAFLS 716
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
L NV PD VT++++ISAC+ LG + + A ++G S
Sbjct: 717 ACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAACIMAVILQKGF-S 775
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
N+ V AL++ +++CG AR +FD+ EK++VTW AMI Y M G+G +L LFS M
Sbjct: 776 MNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMHGNGEAALDLFSMM 835
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
++ V P+++ F +ILSACSH G+V +G F S+ D P M+HY CMVDLL R G
Sbjct: 836 IDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQADHGITPRMEHYACMVDLLGRTGH 895
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L+EA + + +MP P +L + L C + + +GE + K +++ K+ YV++SN+
Sbjct: 896 LDEAYDIVRSMPFTPSDNLLESLLGACRFHGNYKIGESVGKLLIKSEYGKSRSYVMLSNI 955
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPG 670
YAS G+W Q+R M+ +GL K+ G
Sbjct: 956 YASAGKWSDCEQLRLDMEAKGLRKNVG 982
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 183/549 (33%), Positives = 275/549 (50%), Gaps = 36/549 (6%)
Query: 35 HELDQ----TFASFHSLPSIPCLNLLG-LCKSTGSLKAF---HALLIVDGLTNDK-CNTK 85
H+L Q +FAS I L +L L + T SLK HA L V G D+ T
Sbjct: 19 HQLKQYGAKSFASSSPTSEIAHLKVLTVLLRDTCSLKCLREIHARLAVAGAIQDRFVVTG 78
Query: 86 LVSMYGSFGHVKYARSVFDSM--PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
LV Y SFG A +F P YS +++R + + ++++++ Y+ +
Sbjct: 79 LVERYVSFGKPASAALLFAEAYRGRPAVYSLNLVVRCFSDHGFHRELLDLYRGLCGF--G 136
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
DNF F V++AC + G +VHC +++ G G + V T L+DMYAK I SR+V
Sbjct: 137 SDNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRV 196
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD + ++++SW +M++GY N C +E + M++ + N TL +V C
Sbjct: 197 FDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDR 256
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G LH + LK G + L +AL+ MY ++ +R VFD DLVS+ +MI Y
Sbjct: 257 VAGDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAY 316
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVL-SASAQLGNLNMGRMVHSLGIRLGL-ED 380
Q +A ++F A PN +T+ SVL S S L +N G VH + I+LGL E
Sbjct: 317 MQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQ 376
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
+V++ALV MY+K + + +F +EK+ I WNS+ISG N
Sbjct: 377 VSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQI 436
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V+PDA T+++VIS C + V S+HAY+ + S V ALL YA CGD
Sbjct: 437 AGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNR-FESYQSVMNALLAMYADCGDIS 495
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS--A 541
++ +F M + ++W+ MI G+ GD SL LF M +EEV + V ++S +
Sbjct: 496 TSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLS 555
Query: 542 CSHTGMVGE 550
S +VGE
Sbjct: 556 VSEDAIVGE 564
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 262/481 (54%), Gaps = 21/481 (4%)
Query: 217 MIAGYVQNDCAQEGLVLFNRMREG--FVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
++ ++ Q L L NR E F ++ ++A R L Q + +H
Sbjct: 28 IVESXIETQFRQTSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASV 87
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
G+ N + L+ Y + DA +FD +C D VSW+ M+ G+ + G
Sbjct: 88 HGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGT 147
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAK 393
F + P++ T+ V+ A L NL MGR++H + + GL+ D+ V ALVDMY K
Sbjct: 148 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 207
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSV 436
C I DAR++F+ E+D++ W +I G ++ V PD V +V+V
Sbjct: 208 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 267
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ ACA LGA+ + Y ++ +V +GTA+++ YAKCG +SAR +FD M EKN
Sbjct: 268 VFACAKLGAMHKARIIDDYIQRKKF-QLDVILGTAMIDMYAKCGCVESAREIFDRMEEKN 326
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFY 556
++WSAMI YG G G +L LF ML+ + P+++ ++L ACSH G+V EG + F
Sbjct: 327 VISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFS 386
Query: 557 SMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRF 616
SM D+ +KHY C+VDLL RAGRL+EAL+ +++M IE D L+GAFL C +
Sbjct: 387 SMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDV 446
Query: 617 DLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L E +LEL +YVL+SN+YA+ GRW V ++R+LM QR L K+PG + +++
Sbjct: 447 VLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEV 506
Query: 677 D 677
D
Sbjct: 507 D 507
Score = 305 bits (780), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 164/444 (36%), Positives = 246/444 (55%), Gaps = 25/444 (5%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L T ++R +H +HG + N + L+ Y + DA +FD +C D
Sbjct: 747 LPTNLTQVRQVHXQASVHGMLQ------NLIVANKLVXFYSYYRALDDAYGLFDGMCVRD 800
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
VSW+ M+ G+ + G F + P++ T+ V+ A L NL MGR++H
Sbjct: 801 SVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHH 860
Query: 372 LGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------- 422
+ + GL+ D+ V ALVDMY KC I DAR++F+ E+D++ W +I G
Sbjct: 861 IVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANE 920
Query: 423 ---------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALL 473
++ V PD V +V+V+ ACA LGA+ ++ Y ++ +V +GTA++
Sbjct: 921 SLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKF-QLDVILGTAMI 979
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
+ +AKCG +SAR +FD M EKN ++WSAMI YG G G +L LF ML + PN++
Sbjct: 980 DMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKI 1039
Query: 534 IFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMEN 593
++L ACSH G+V EG + F M D+ +KHY C+VDLL RAGRL+EAL+ + +
Sbjct: 1040 TLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXS 1099
Query: 594 MPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRV 653
M E D L+GAFL C + L E +LEL P +Y+L+SN+YA+ GRW V
Sbjct: 1100 MTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDV 1159
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
++R+LM QR L K PG + +++D
Sbjct: 1160 AKIRDLMSQRRLKKIPGWTWIEVD 1183
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 233/485 (48%), Gaps = 31/485 (6%)
Query: 28 NQQTPTQHELDQTFASFHSLPSI-PCLNLLGL--CKSTGSLKAFHALLIVDG-LTNDKCN 83
Q + H ++ + FH L + P + L C++ ++ HA V G L N
Sbjct: 38 RQTSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVA 97
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
KL+ Y + + A +FD M D S+ VM+ + Y + ++ + +
Sbjct: 98 NKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGAR 157
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
DN+ V++AC +L+++ G +H + K G D FV LVDMY KCR+I +R +
Sbjct: 158 PDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFL 217
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FD+ ++++V+WT MI GY + A E LVLF +MRE V +++ + ++V ACAKL A+
Sbjct: 218 FDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAM 277
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
H+ + + YI + +++ L TA++DMY KCG + AR +FD + +++SW+AMI Y
Sbjct: 278 HKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAY 337
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLG 377
G KAL LF + P+ +T+AS+L A + G + G M +R
Sbjct: 338 GYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTD 397
Query: 378 LEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSV 436
++ YT + VD+ + + +A + I T EKD W + + + +V
Sbjct: 398 VKHYTCV---VDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKD-----VVLA 449
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
A SL +Q + H +L SN+Y AK D S R R K
Sbjct: 450 EKAATSLLELQSQNPGHY------VLLSNIYANAGRWEDVAKIRDLMSQR------RLKK 497
Query: 497 TVTWS 501
T W+
Sbjct: 498 TPGWT 502
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 206/417 (49%), Gaps = 21/417 (5%)
Query: 77 LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKC 136
L N KLV Y + + A +FD M D S+ VM+ + Y + ++
Sbjct: 767 LQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRE 826
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD 195
+ + DN+ V++AC +L+++ G +H + K G D FV LVDMY KCR+
Sbjct: 827 LIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCRE 886
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
I +R +FD+ ++++V+WT MI GY + A E LVLF++MRE V +++ + ++V A
Sbjct: 887 IEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFA 946
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
CAKL A+H+ + + YI + +++ L TA++DM+ KCG + AR +FD + +++SW
Sbjct: 947 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISW 1006
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVH 370
+AMI Y G KAL LF + PN +T+ S+L A + G + G M
Sbjct: 1007 SAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWE 1066
Query: 371 SLGIRLGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSIISGLDDNVSPD 429
+R ++ YT + VD+ + + +A + I T EKD W + + +
Sbjct: 1067 DYSVRXDVKHYTCV---VDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTH---K 1120
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
V L A SL +Q + H +L SN+Y AK D S R
Sbjct: 1121 DVXLAE--KAATSLLELQPQNPGHY------ILLSNIYANAGRWEDVAKIRDLMSQR 1169
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 181/378 (47%), Gaps = 21/378 (5%)
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V LV Y+ R + + +FD ++ VSW+ M+ G+ + F +
Sbjct: 772 VANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCG 831
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ TL ++ AC L+ L G+ +H + K G++++ + AL+DMY KC I DAR
Sbjct: 832 ARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDAR 891
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+FD++ DLV+WT MI GY + G +++L LF + P+ V + +V+ A A+LG
Sbjct: 892 FLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLG 951
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
++ R + R + D + A++DM+AKC + AR IF+ EK+VI+W+++I+
Sbjct: 952 AMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIA 1011
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
L + P+ +TLVS++ AC+ G V+ G + + +
Sbjct: 1012 AYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVR 1071
Query: 464 SNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+V T +++ + G A +++ EK+ W A +G D + +
Sbjct: 1072 XDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATS 1131
Query: 523 MLNEEVQPNEVIFTTILS 540
+L E+QP +LS
Sbjct: 1132 LL--ELQPQNPGHYILLS 1147
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 326/622 (52%), Gaps = 32/622 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ LVS + G + YA+++F M + S +I ++ VE + M+ ++
Sbjct: 323 SALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVEL 382
Query: 144 HDNFVFSKVLKACCELRDIDEGMK----VHCEIVKVGGPDSFVL--TGLVDMYAKCRDIG 197
+ N + +L A E ++ G + VH +++ G ++ + GL++MYAKC I
Sbjct: 383 NPN-SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAIN 441
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+ VF +K+ V+W SMI G QN E + F MR + + T+ S +++CA
Sbjct: 442 DACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCA 501
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
L + G+ LH LK+G++++ + ALL +Y +CG +++ + F + D VSW +
Sbjct: 502 SLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNS 561
Query: 318 MIVGYTQSGYPD--KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+I G P +A++ F A + PN VT ++L+A + L +G+ +H+L ++
Sbjct: 562 LI-GALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLK 620
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISG-LDDNVSP---- 428
+ D + NAL+ Y KC + IF S++ D ++WNS+ISG + + + P
Sbjct: 621 RNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMD 680
Query: 429 ------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
D T +V+SACA++ ++ G +H S + L S++ +G+AL++ Y
Sbjct: 681 MVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVR-ACLESDIVIGSALVDMY 739
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG A F+ M +N +W++MI GY G G SL LF+ M + P+ V F
Sbjct: 740 AKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFV 799
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+LSACSH G+V EG+ F SM + P M+H+ CMVDLL R G L + +F+ MP+
Sbjct: 800 GVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPV 859
Query: 597 EPDVSLFGAFLHGCGLYSRFD--LGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVN 654
+P+V ++ L C + + LG + +LE+ P A Y+L+SN+YAS G+W V
Sbjct: 860 KPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVA 919
Query: 655 QVRELMKQRGLSKSPGCSLVDL 676
+ R M++ + K GCS V +
Sbjct: 920 KTRVAMRKAFVKKEAGCSWVTM 941
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 150/515 (29%), Positives = 249/515 (48%), Gaps = 41/515 (7%)
Query: 66 KAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+ H L +G ND CNT L+++Y G + R VFD MP + S+ +I Y
Sbjct: 93 EELHLQLFKNGFVNDLFLCNT-LINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC--CELRDIDEGMKVHCEIVKVGGPDSF 181
N + + E ++ M +++ F V++AC C + GM++H + K +
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDV 211
Query: 182 VLTG-LVDMYAKCRD-IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
+ L+ MY + +R+ FD +N+VS SMI+ Y Q A +F+ M++
Sbjct: 212 TASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQK 271
Query: 240 GF----VEGNQITLGSLVTACAKL--RALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
++ N+ T GSL++A L L + L + K G + ++ +AL+ + K
Sbjct: 272 EVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAK 331
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIAS 352
G+I A+++F ++ ++VS +I+G + ++A++LF + K + PN I
Sbjct: 332 AGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI-- 389
Query: 353 VLSASAQLGNLNMGRM----VHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFET 406
+L+A + L G+ VH+ IR GL + + N L++MYAKC I DA +F
Sbjct: 390 ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRL 449
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
KD + WNS+I+GLD N + P T++S +S+CASLG + VG
Sbjct: 450 MDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG- 508
LH K G L +V V ALL Y +CG + + F M + + V+W+++IG
Sbjct: 510 EQLHCEGLKLG-LDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALAD 568
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ ++ F M+ PN V F TIL+A S
Sbjct: 569 SEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVS 603
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 236/503 (46%), Gaps = 56/503 (11%)
Query: 92 SFGHVKYARSVFDSMPNP---DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
S H + +F+ NP QV++ Y + L+ + V+ HD +
Sbjct: 28 SIPHSHHYPLLFNPFTNPLPPSSIPLQVLVDLYKSSQLHHNPVQ-----------HDEKI 76
Query: 149 --FSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
++ + C +D +E +H ++ K G D F+ L+++YA+ D+GS R+VFDE
Sbjct: 77 ESLAQRYRYSCGSKDAEE---LHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDE 133
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKL--RAL 262
+N+VSW+ +I+GY +N E LF +M +GF+ N GS++ AC + L
Sbjct: 134 MPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMP-NHYAFGSVIRACQECGEYGL 192
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMIVG 321
G +HG + K + L+ MY G + AR FD + +LVS +MI
Sbjct: 193 KFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISV 252
Query: 322 YTQSGYPDKALKLFTDKKWA----DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
Y Q G A +F+ + PN T S++SA+ L N + ++ L R+
Sbjct: 253 YCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGL-VLLEQLLTRVE 311
Query: 378 ----LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------- 422
L D V +ALV +AK I A+ IF+ S ++V++ N +I GL
Sbjct: 312 KSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVE 371
Query: 423 -----DDNVSPDAVTLVSVISACASLGAVQ----VGSSLHAYSTKQGLLSSNVYVGTALL 473
D+V + + + +++A ++ GS +HA+ + GLL++ + +G L+
Sbjct: 372 LFMEMKDSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLI 431
Query: 474 NFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEV 533
N YAKCG A +VF M K++VTW++MI G ++ F +M E+ P+
Sbjct: 432 NMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNF 491
Query: 534 IFTTILSACSHTGM--VGEGWKC 554
+ LS+C+ G VGE C
Sbjct: 492 TMISALSSCASLGWISVGEQLHC 514
>gi|449456490|ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 207/663 (31%), Positives = 334/663 (50%), Gaps = 68/663 (10%)
Query: 73 IVDGLTNDKCNTKLVSMYGSF----GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
+ +GL + N ++Y S GH+ A+++F+ MP S+ +MI Y Y
Sbjct: 26 LCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYS 85
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLV 187
+ + M + + FS +L C EG + HC ++K G V + LV
Sbjct: 86 EALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLKSGLQIFERVGSALV 145
Query: 188 DMYAKCRDIGSSRQVFDETLDKN-------------------------------VVSWTS 216
YA DI ++QVFDE DKN VV+WT+
Sbjct: 146 YFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWTT 205
Query: 217 MIAGYV--QNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
MI+ Y +++C + GL LF MR G VE N+ T S+V AC ++R L GK +HG +
Sbjct: 206 MISAYARSEHNC-KRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGILT 264
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K G + + +AL+ Y +C I +A++V+D + L + +++ G +G + A +
Sbjct: 265 KYGFHFDHSVCSALILFYCQCEAIDNAKAVYDSMERPCLKASNSLLEGLIFAGRINDAEE 324
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAK 393
+F + N V+ +L A G + + + R+ + + +N ++ +Y++
Sbjct: 325 IFCKLR----EKNPVSYNLMLKGYATSGRIEGSKRLFE---RMTHKTTSSLNTMISVYSR 377
Query: 394 CHVIADARYIFETT-SEKDVIAWNSIISGLDDN-----------------VSPDAVTLVS 435
I A +FE+ SE D + WNS+ISG N V T +
Sbjct: 378 NGEIDKAFKLFESVKSEGDPVTWNSMISGCIQNHQHEGALKLYITMCRTSVERSRSTFSA 437
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ AC L +Q+G +LH ++ ++ SNVYVGT+L++ YAKCG A+ F ++
Sbjct: 438 LFQACTCLEYIQLGQALHVHAIREAF-DSNVYVGTSLIDMYAKCGSIYDAQTSFASVCFP 496
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
N ++A+I GY G G + ++F +ML +V PN ILSACS GMV EG F
Sbjct: 497 NVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTVF 556
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
+SM + + +P+++HY C+VDLL R+GRL EA F+ MPIE D ++GA L+ C +
Sbjct: 557 HSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWMD 616
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI-RVNQVRELMKQRGLSKSPGCSLV 674
+LGE + KK+L L P Y+++SN+YA G+W+ ++N R+LM + + K GCS +
Sbjct: 617 LELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRQLMSLK-VKKIRGCSWI 675
Query: 675 DLD 677
D++
Sbjct: 676 DVN 678
>gi|242095158|ref|XP_002438069.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
gi|241916292|gb|EER89436.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
Length = 563
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 289/552 (52%), Gaps = 26/552 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS------FVLTGLVDMYAKCRDIGSSRQ 201
++S +L++C +G VH + D + T LV Y+ D+ ++R
Sbjct: 13 LYSSLLQSCIGANAFRQGKSVHHRAIITASSDPSPPDLLHLSTKLVMFYSHFGDVAAARA 72
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VFD ++VVSWT+M++GY +N A E L LF M NQ T GS ACA R
Sbjct: 73 VFDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGARPNQFTFGSAARACAGGRC 132
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
G+ +H K + + +AL+DM+++CG++ DAR +F E+ DLVSW A++ G
Sbjct: 133 ARSGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNALMRG 192
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY 381
+ + G+ AL LF P+H T S L A + + ++H+ I+LG D
Sbjct: 193 FVERGHYSDALGLFASMLRDGMLPDHFTFGSALKACGAISVIFNVELIHTCIIKLGYWDE 252
Query: 382 TVINA-LVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS--GLDDNVSPDA-------- 430
V A L+D YAKC ++ AR I+++ E D+++ ++IS +D N S DA
Sbjct: 253 KVATASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALISDHSMDRNYSEDAMKLFCKIH 312
Query: 431 --------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ L +++ CA++ +++ G+ +HAY K+ + ++ + AL++ YAK G+
Sbjct: 313 REGLRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMG-DLALDNALVDMYAKSGEY 371
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+R FD M +N ++W+++I G G ++ LF+ M + V+PN+V F ++LSAC
Sbjct: 372 LDSRRAFDEMPSRNVISWTSLITACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSAC 431
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH+GM+ +G + F SM + P KHY +DLLAR G+LE+A ++ E S+
Sbjct: 432 SHSGMMNKGMEYFTSMMNKYGIDPRAKHYSSAIDLLARGGQLEDAWMLLQKTNTECKSSM 491
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L C ++ LGE + + P + Y +++N+YA W + R+L+ +
Sbjct: 492 YGAMLGACKVHGNIPLGETAANNLFSIDPKSSVNYAVLANMYAESCLWEDAQRTRKLLAE 551
Query: 663 RGLSKSPGCSLV 674
K G S++
Sbjct: 552 TSKGKEVGFSVI 563
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 221/453 (48%), Gaps = 25/453 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+TKLV Y FG V AR+VFD MP+ S+ M+ Y N + +E + M +
Sbjct: 54 STKLVMFYSHFGDVAAARAVFDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGA 113
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+ F F +AC R G +VH C D FV + L+DM+ +C +G +R+
Sbjct: 114 RPNQFTFGSAARACAGGRCARSGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARR 173
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLR 260
+F E K++VSW +++ G+V+ + L LF M R+G + + T GS + AC +
Sbjct: 174 LFAEMERKDLVSWNALMRGFVERGHYSDALGLFASMLRDGMLP-DHFTFGSALKACGAIS 232
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ + +H I+K+G +L+D Y KC ++ AR ++D +C DLVS TA+I
Sbjct: 233 VIFNVELIHTCIIKLGYWDEKVATASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALIS 292
Query: 321 GYT-QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS-LGIRLGL 378
++ Y + A+KLF + + ++++L A + ++ G +H+ + + +
Sbjct: 293 DHSMDRNYSEDAMKLFCKIHREGLRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPM 352
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------------- 422
D + NALVDMYAK D+R F+ ++VI+W S+I+
Sbjct: 353 GDLALDNALVDMYAKSGEYLDSRRAFDEMPSRNVISWTSLITACAQHGFGEDAVTLFARM 412
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSS-LHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+D V P+ VT +S++SAC+ G + G + K G+ + +A ++ A+ G
Sbjct: 413 EEDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMNKYGIDPRAKHYSSA-IDLLARGG 471
Query: 481 DAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ A M+ E + + AM+G + G+
Sbjct: 472 QLEDAWMLLQKTNTECKSSMYGAMLGACKVHGN 504
>gi|125555425|gb|EAZ01031.1| hypothetical protein OsI_23065 [Oryza sativa Indica Group]
Length = 671
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 193/620 (31%), Positives = 321/620 (51%), Gaps = 31/620 (5%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK-- 139
CN L+S Y + GH+ AR VFD MP + S+ V+I + D + + M +
Sbjct: 40 CNNLLLS-YQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGVLGDALSLFAGMLRGG 98
Query: 140 RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGS 198
++F + ++ C +D G +VH VK+G D V LVDMYAKC +GS
Sbjct: 99 ERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVAGTLVDMYAKCGRVGS 158
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCA---QEGLVLFNRMREGFVEGNQITLGSLVTA 255
S + F T ++V+SWTSMIA V + + +VLF +M V T ++
Sbjct: 159 SWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVLKVWPTNATFSCILKV 218
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI--DLV 313
L GK +HG ++K+G E++ L TALL MY +CG + + + C I D
Sbjct: 219 FDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGMDEITRL---ACRIRHDAF 275
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
S T+++ Y ++G +A+++F D + I S+L + LG L + + +H
Sbjct: 276 SRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSLGQLRVVKEIHCYA 335
Query: 374 IRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-LDDNVSPDAV 431
++ D ++NA+V +Y KC IA + +F T KD I+W ++++ + +++S +A+
Sbjct: 336 LKNFFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTALLTCYVQNDLSQEAL 395
Query: 432 ----------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ SV+ AC++ ++ G +H+ K G+ + V AL+
Sbjct: 396 FFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQIHSRVVKLGV-DDDTSVENALVTM 454
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
YAKCG Q A +F++ R + ++W+A+I + G+ ++ LF M E V P++ F
Sbjct: 455 YAKCGVVQVALKIFNSTRNRGIISWNALITSFSQHGNEVAAIQLFDMMQEEMVCPDDYTF 514
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+LS+CS G+V EG + F M + P M+HY CMVDL ARAGR +A++F++ MP
Sbjct: 515 VGLLSSCSRMGLVAEGCEYFKQMKTKYNLEPKMEHYTCMVDLFARAGRFSDAMKFIDAMP 574
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
+PD ++ A L C ++ DLG + KK+LE+ P+ Y+++S+++AS W +
Sbjct: 575 CQPDQLVWEALLASCRVHGNLDLGRMAAKKILEIKPEDPSPYIILSSIHASIDMWDEKAR 634
Query: 656 VRELMKQRGLSKSPGCSLVD 675
R L+ + L K G S +D
Sbjct: 635 NRTLLDFQQLRKDVGSSQLD 654
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 190/410 (46%), Gaps = 26/410 (6%)
Query: 168 VHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
VH VK+G +++ L+ Y + +R VFDE +NVVSW+ +I +
Sbjct: 24 VHGAAVKLGCLASTYLCNNLLLSYQARGHLADARGVFDEMPRRNVVSWSVLIVASSRLGV 83
Query: 227 AQEGLVLFNRMREGFVEG--NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
+ L LF M G N T+ +LV CA+ + G+ +H +K+G++ + +
Sbjct: 84 LGDALSLFAGMLRGGERDRPNSFTVAALVAGCARAKDAVAGEQVHASAVKLGVDEDESVA 143
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI---VGYTQSGYPDKALKLFTDKKWA 341
L+DMY KCG + + F ++SWT+MI V + SGY D A+ LF
Sbjct: 144 GTLVDMYAKCGRVGSSWRAFVLTPQRSVLSWTSMIACLVNHGDSGYRDTAIVLFKKMLVL 203
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADA 400
+P + T + +L L G+ VH +++G E D + AL+ MY +C + D
Sbjct: 204 KVWPTNATFSCILKVFDVPELLPSGKQVHGCLVKMGTEVDPALGTALLAMYGRCGGM-DE 262
Query: 401 RYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASL 443
D + S+++ N + D + S++ C+SL
Sbjct: 263 ITRLACRIRHDAFSRTSLLTAYARNGCNMEAVRVFRDMLMGHMPIDQSAITSLLQVCSSL 322
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
G ++V +H Y+ K + + A++ Y KCGD S+ +VF+ + K+T++W+A+
Sbjct: 323 GQLRVVKEIHCYALKN-FFRLDTLLLNAIVTVYGKCGDIASSEIVFNTLENKDTISWTAL 381
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+ Y +L F +M+ + ++ + T++L ACS T + GW+
Sbjct: 382 LTCYVQNDLSQEALFFFREMVRKGLESSIFCITSVLRACSATSSLSCGWQ 431
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 192/601 (31%), Positives = 298/601 (49%), Gaps = 66/601 (10%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETL 207
F ++LK+C +D+ G +H +K P S L+ + +Y+KC + ++ F++T
Sbjct: 11 FRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTH 70
Query: 208 DKNVVSWTSMIAGYVQ--------------------------NDCAQEG-----LVLFNR 236
+ NV S+ ++IA Y + N A G L LF
Sbjct: 71 EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQG--KWLHGYILKIGIEINSHLVTALLDMYVKC 294
MRE + + T ++TAC H G + LH G + + +LL Y K
Sbjct: 131 MREMGLVMDGFTFSGVITACCN----HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKN 186
Query: 295 GNIRDARSVFDELCS--IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
G + +A VF+ + D VSW +MIV Y Q KAL L+ D F + T+AS
Sbjct: 187 GILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLAS 246
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHV-IADARYIFETTSEK 410
VL+ + + +L+ G H+ I+ G ++ V + L+DMYAKC ++++R +FE
Sbjct: 247 VLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGS 306
Query: 411 DVIAWNSIISGLDDNVS------------------PDAVTLVSVISACASLGAVQVGSSL 452
D++ WN++ISG N PD + V ISAC++L + G
Sbjct: 307 DLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQF 366
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
HA + K + S+ + V AL+ Y+KCG+ Q AR +F M + NTVT +++I GY G
Sbjct: 367 HALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGI 426
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
G SL LF ML + P + +ILSAC+HTG V EG K F M F P +HY
Sbjct: 427 GTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYS 486
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPD 632
CM+DLL RAG+L EA ++ MP P + + A L C Y +L E + L+L P
Sbjct: 487 CMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPT 546
Query: 633 KACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSR 686
A Y++++++Y++ +W ++R+LM+ RG+ K PGCS ++L+ +A D S R
Sbjct: 547 NAVPYIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPR 606
Query: 687 V 687
+
Sbjct: 607 I 607
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 211/447 (47%), Gaps = 29/447 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++ Y + A +FD +P PD SF +I Y + + MR+ D
Sbjct: 80 LIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMD 139
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF--VLTGLVDMYAKCRDIGSSRQVF 203
F FS V+ ACC + ++H + G DS+ V L+ Y+K + + VF
Sbjct: 140 GFTFSGVITACCN--HVGLIRQLH-SLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVF 196
Query: 204 DETLD--KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+ + ++ VSW SMI Y Q+ + L L+ M E + TL S++T + +
Sbjct: 197 NGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVED 256
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG-NIRDARSVFDELCSIDLVSWTAMIV 320
L G H +K G N H+ + L+DMY KCG + ++R VF+E+C DLV W MI
Sbjct: 257 LSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMIS 316
Query: 321 GYTQSGYPD-KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR--LG 377
GY+Q+ +AL+ F + A ++P+ + +SA + L + + G+ H+L ++ +
Sbjct: 317 GYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIP 376
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
+V NALV MY+KC + DAR +F+ + + + NSII+G
Sbjct: 377 SNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQ 436
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L +++P ++TLVS++SACA G V+ G + + +++ + G
Sbjct: 437 MLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAG 496
Query: 481 DAQSARMVFDAMR-EKNTVTWSAMIGG 506
A + D M + W+A++G
Sbjct: 497 KLSEAERLIDTMPFSPGSAAWAALLGA 523
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/174 (19%), Positives = 74/174 (42%), Gaps = 9/174 (5%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
C NL S K FHAL + + +++ N LV+MY G+++ AR +F MP
Sbjct: 354 CSNL----SSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQH 409
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ + +I Y + + + + ++ M + +L AC ++EG K
Sbjct: 410 NTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYF 469
Query: 170 CEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIAG 220
+ + G P++ + ++D+ + + + ++ D +W +++
Sbjct: 470 NMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGA 523
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 184/610 (30%), Positives = 300/610 (49%), Gaps = 75/610 (12%)
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
+S + G + AR++FD + + S+ ++ YF N + + + M +R
Sbjct: 23 ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPER------ 76
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
++ GLV Y K I +R+VFD+
Sbjct: 77 --------------------------------NTISWNGLVSGYVKNGMISEARKVFDKM 104
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++NVVSWTSM+ GYVQ E +LF RM E V + LG L+ + + +
Sbjct: 105 PERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGR----VDEAR 160
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
L I + +++++ L G + +AR +FDE+ ++V+WT+MI GY +
Sbjct: 161 RLFDMIPVKDVVASTNMIGGLCSE----GRLSEAREIFDEMPQRNVVAWTSMISGYAMNN 216
Query: 327 YPDKALKLFTDKKWADFFP--NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
D A KLF + P N VT ++L + G +N L + ++
Sbjct: 217 KVDVARKLF------EVMPDKNEVTWTAMLKGYTRSGRINEA---AELFKAMPVKPVAAC 267
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLD------------DNVS 427
N ++ + + AR++F+ EKD W+++I G + + V
Sbjct: 268 NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVR 327
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+ +++S++S C SL ++ G +H+ + ++YV + L+ Y KCGD + +
Sbjct: 328 PNFPSIISILSVCGSLASLDHGRQVHSQLVRSHF-DLDIYVSSVLITMYIKCGDLVTGKR 386
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VFD K+ V W+++I GY G G +L +F +M + P+E+ F +LSAC +TG
Sbjct: 387 VFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGK 446
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG + F SM ++ +HY CMVDLL RAG+L EA+ +ENMP+E D ++GA L
Sbjct: 447 VKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALL 506
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C + DL E+ KK+L+L P A Y+L+SNLYAS RW V ++R+ M+ R +SK
Sbjct: 507 SACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSK 566
Query: 668 SPGCSLVDLD 677
SPGCS +++D
Sbjct: 567 SPGCSWIEVD 576
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 203/439 (46%), Gaps = 36/439 (8%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LVS Y G + AR VFD MP + S+ M+R Y + + +++ + + R+ E +
Sbjct: 84 LVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGY----VQEGLIDEAELLFWRMPEKN 139
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
++ +L E +DE ++ +++ V D T ++ + +R++FDE
Sbjct: 140 VVSWTVMLGGLIEDGRVDEARRLF-DMIPV--KDVVASTNMIGGLCSEGRLSEAREIFDE 196
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
+NVV+WTSMI+GY N+ LF M + N++T +++ + +++
Sbjct: 197 MPQRNVVAWTSMISGYAMNNKVDVARKLFEVM----PDKNEVTWTAMLKGYTRSGRINEA 252
Query: 266 KWLHGYI-LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
L + +K N ++ L+ G + AR VFD++ D +W+A+I Y +
Sbjct: 253 AELFKAMPVKPVAACNGMIMGFGLN-----GEVGKARWVFDQMKEKDDGTWSALIKIYER 307
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
G+ +AL LF+ + PN +I S+LS L +L+ GR VHS +R + D V
Sbjct: 308 KGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYV 367
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
+ L+ MY KC + + +F+ S KD++ WNSII+G
Sbjct: 368 SSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGA 427
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
+PD +T + V+SAC G V+ G + + + +++ + G A
Sbjct: 428 APDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAM 487
Query: 487 MVFDAMR-EKNTVTWSAMI 504
+ + M E + + W A++
Sbjct: 488 NLIENMPVEADAIVWGALL 506
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 169/344 (49%), Gaps = 12/344 (3%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
+T ++ S G + AR +FD MP + ++ MI Y +N+ + ++ M
Sbjct: 173 ASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVM---- 228
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSR 200
+ + ++ +LK I+E E+ K G++ + ++G +R
Sbjct: 229 PDKNEVTWTAMLKGYTRSGRINEA----AELFKAMPVKPVAACNGMIMGFGLNGEVGKAR 284
Query: 201 QVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
VFD+ +K+ +W+++I Y + E L LF+ M+ V N ++ S+++ C L
Sbjct: 285 WVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLA 344
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+L G+ +H +++ +++ ++ + L+ MY+KCG++ + VFD S D+V W ++I
Sbjct: 345 SLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIA 404
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-RMVHSLGIRLGLE 379
GY Q G+ +KAL++F + + P+ +T VLSA G + G + S+ + ++
Sbjct: 405 GYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVD 464
Query: 380 DYTVINA-LVDMYAKCHVIADARYIFETTS-EKDVIAWNSIISG 421
T A +VD+ + + +A + E E D I W +++S
Sbjct: 465 QKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 107/266 (40%), Gaps = 41/266 (15%)
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
+ I+ C ++G A + L S V A++ Y A+ +FD M E
Sbjct: 16 AAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPE 75
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
+NT++W+ ++ GY G + +F M + N V +T+++ G++ E
Sbjct: 76 RNTISWNGLVSGYVKNGMISEARKVFDKM----PERNVVSWTSMVRGYVQEGLIDEAELL 131
Query: 555 FYSMC------------------------RDFKFVPSMKHYVC---MVDLLARAGRLEEA 587
F+ M R F +P +K V M+ L GRL EA
Sbjct: 132 FWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIP-VKDVVASTNMIGGLCSEGRLSEA 190
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYAS 646
E + MP + +V + + + G + ++ D+ +K+ E+ PDK + + Y
Sbjct: 191 REIFDEMP-QRNVVAWTSMISGYAMNNKVDVA----RKLFEVMPDKNEVTWTAMLKGYTR 245
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCS 672
G R+N+ EL K + C+
Sbjct: 246 SG---RINEAAELFKAMPVKPVAACN 268
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 186/610 (30%), Positives = 304/610 (49%), Gaps = 75/610 (12%)
Query: 87 VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDN 146
++ Y G ++ AR VFD MP+ S+ M+ YF N+ ++ + M +R
Sbjct: 23 IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER------ 76
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
++ GL+ Y K R + +R+ FD
Sbjct: 77 --------------------------------NTVSWNGLISGYVKNRMVSEARKAFDTM 104
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++NVVSWT+M+ GYVQ E LF +M E V + LG L+ ++R + + +
Sbjct: 105 PERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLI----QVRRIDEAR 160
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
L + + +++++ Y + G + +AR +FDE+ +++SWT MI GY Q+G
Sbjct: 161 GLFDIMPVKDVVARTNMISG----YCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNG 216
Query: 327 YPDKALKLFTDKKWADFFP--NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
D A KLF + P N V+ ++L Q G + L + ++
Sbjct: 217 QVDVARKLF------EVMPEKNEVSWTAMLMGYTQGGRIEEA---SELFDAMPVKAVVAC 267
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVS 427
NA++ + + +A AR +F+ EKD W+++I + + V
Sbjct: 268 NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQ 327
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
+ +L+SV+S CASL ++ G +HA K S+V+V + L+ Y KCGD AR
Sbjct: 328 SNFPSLISVLSVCASLASLDHGRQVHAELVKSQF-DSDVFVASVLITMYVKCGDLVKARQ 386
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+FD K+ V W+++I GY G +L +F +M + + + V F +LSACS+TG
Sbjct: 387 IFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGK 446
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
V EG + F SM + P +HY CMVDLL RAG + +A++ ++ MP+E D ++GA L
Sbjct: 447 VKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSK 667
C + +L EV KK+L+L P A Y+L+SN+YAS GRW V ++R M+ + +SK
Sbjct: 507 GACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSK 566
Query: 668 SPGCSLVDLD 677
SPGCS ++++
Sbjct: 567 SPGCSWIEVE 576
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 202/451 (44%), Gaps = 56/451 (12%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S Y V AR FD+MP + S+ M+R Y L + + ++ E +
Sbjct: 84 LISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFW----QMPEKN 139
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
++ +L ++R IDE + +I+ V D T ++ Y + + +R++FDE
Sbjct: 140 VVSWTVMLGGLIQVRRIDEARGLF-DIMPV--KDVVARTNMISGYCQEGRLAEARELFDE 196
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
+NV+SWT+MI+GYVQN LF M E N+++ ++
Sbjct: 197 MPRRNVISWTTMISGYVQNGQVDVARKLFEVM----PEKNEVSWTAM------------- 239
Query: 266 KWLHGYILKIGIEINSHLVTAL-LDMYVKC----------GNIRDARSVFDELCSIDLVS 314
L GY IE S L A+ + V C G + AR VFD++ D +
Sbjct: 240 --LMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGT 297
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W+AMI Y + G+ +AL LF + N ++ SVLS A L +L+ GR VH+ +
Sbjct: 298 WSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELV 357
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------- 422
+ + D V + L+ MY KC + AR IF+ S KD++ WNSII+G
Sbjct: 358 KSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQ 417
Query: 423 ------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
++ D VT V V+SAC+ G V+ G + + L+ +++
Sbjct: 418 VFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLL 477
Query: 477 AKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ G A + M E + + W A++G
Sbjct: 478 GRAGLVNDAMDLIQKMPVEADAIIWGALLGA 508
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 168/343 (48%), Gaps = 14/343 (4%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
T ++S Y G + AR +FD MP + S+ MI Y N + ++ M
Sbjct: 173 ARTNMISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVM---- 228
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVH--CEIVKVGGPDSFVLTGLVDMYAKCRDIGSS 199
E + ++ +L + I+E ++ + V ++ +L + + ++ +
Sbjct: 229 PEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILG-----FGQNGEVAKA 283
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
RQVFD+ +K+ +W++MI Y + E L LF M+ V+ N +L S+++ CA L
Sbjct: 284 RQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASL 343
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+L G+ +H ++K + + + + L+ MYVKCG++ AR +FD D+V W ++I
Sbjct: 344 ASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSII 403
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-RMVHSLGIRLGL 378
GY Q G ++AL++F + + + VT VLSA + G + G + S+ + +
Sbjct: 404 TGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLV 463
Query: 379 EDYTVINA-LVDMYAKCHVIADARYIFETTS-EKDVIAWNSII 419
E T A +VD+ + ++ DA + + E D I W +++
Sbjct: 464 EPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 37/249 (14%)
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLG 444
N+ + YA+ I AR +F+ +K +++WNS+++G N P
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPR--------------- 64
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
A + N L++ Y K AR FD M E+N V+W+AM+
Sbjct: 65 --------EARYLFDKMPERNTVSWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMV 116
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GY +G + LF M + N V +T +L + E F D
Sbjct: 117 RGYVQEGLVSEAETLFWQM----PEKNVVSWTVMLGGLIQVRRIDEARGLF-----DIMP 167
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIK 624
V + M+ + GRL EA E + MP +S + + G + D+ +
Sbjct: 168 VKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVIS-WTTMISGYVQNGQVDVA----R 222
Query: 625 KMLELHPDK 633
K+ E+ P+K
Sbjct: 223 KLFEVMPEK 231
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 168/448 (37%), Positives = 255/448 (56%), Gaps = 27/448 (6%)
Query: 251 SLVTACA----KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
+L+ +CA K R +H HG L ++ +L+ LL C + A +F +
Sbjct: 44 ALLLSCASSKFKFRQIHAFSIRHGVPL-TNPDMGKYLIFTLLSF---CSPMSYAHQIFSQ 99
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ + ++ +W MI GY +S P AL+L+ + P+ T +L A A+L ++ G
Sbjct: 100 IQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREG 159
Query: 367 RMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
VHS+ IR G E + N LV MYA C A +FE +E++++ WNS+I+G N
Sbjct: 160 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALN 219
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
V PD T+VS++SACA LGA+ +G H Y K GL N++
Sbjct: 220 GRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL-DGNLHA 278
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
G ALL+ YAKCG + A VFD M EK+ V+W+++I G + G G +L LF ++ + +
Sbjct: 279 GNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGL 338
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
P+E+ F +L ACSH GMV EG+ F M ++ VP ++HY CMVDLL RAG +++A
Sbjct: 339 MPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAH 398
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
EF++NMP++P+ ++ L C ++ LGEV ++L+L P + YVL+SNLYAS+
Sbjct: 399 EFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQ 458
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
RW V++VR M + G+ K+PG SLV+L
Sbjct: 459 RWSDVHKVRRTMLREGVKKTPGHSLVEL 486
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 197/381 (51%), Gaps = 14/381 (3%)
Query: 52 CLNLLGLCKSTG-SLKAFHALLIVDG--LTNDKCNTKLVSMYGSF-GHVKYARSVFDSMP 107
C+ LL C S+ + HA I G LTN L+ SF + YA +F +
Sbjct: 42 CIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQ 101
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
NP+ +++ MIR Y ++ +E Y+ M E D + +LKA +L D+ EG K
Sbjct: 102 NPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEK 161
Query: 168 VHCEIVKVGGPD-SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
VH ++ G FV LV MYA C S+ ++F+ ++N+V+W S+I GY N
Sbjct: 162 VHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGR 221
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E L LF M VE + T+ SL++ACA+L AL G+ H Y++K+G++ N H A
Sbjct: 222 PNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNA 281
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
LLD+Y KCG+IR A VFDE+ +VSWT++IVG +G+ +AL+LF + + P+
Sbjct: 282 LLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPS 341
Query: 347 HVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA- 400
+T VL A + G ++ G RM GI +E Y +VD+ + ++ A
Sbjct: 342 EITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHY---GCMVDLLGRAGLVKQAH 398
Query: 401 RYIFETTSEKDVIAWNSIISG 421
+I + + + W +++
Sbjct: 399 EFIQNMPMQPNAVVWRTLLGA 419
>gi|242074230|ref|XP_002447051.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
gi|241938234|gb|EES11379.1| hypothetical protein SORBIDRAFT_06g027570 [Sorghum bicolor]
Length = 818
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 201/631 (31%), Positives = 338/631 (53%), Gaps = 38/631 (6%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y G V R +FD MP + S+ + WY ++ +E + M + + F
Sbjct: 186 YRGDGGVDVVRRLFDVMPKRNAVSWNTLFGWYVKTGRPQEALELFARMLEDGIKPTPVSF 245
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDET 206
V A + D ++ +VK G D FV++ + M+++ D+ S+ +VF+ T
Sbjct: 246 VNVFPAVAK-EDPSWSFVLYGLLVKHGREYVNDLFVVSSAIAMFSELGDLQSAWRVFEYT 304
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNR-MREGFVEGNQITLGSLVTACAKLRALHQG 265
KN W +MI GYVQN E + L R M V + +T S +TA ++ + G
Sbjct: 305 AKKNTEVWNTMITGYVQNGKFAEAMDLVIRLMGSKEVPLDVVTFLSALTAASQSQDGRLG 364
Query: 266 KWLHGYILK-IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+ LHGY++K + L AL+ MY +CGN++ A +FD L D+VSW M+ + Q
Sbjct: 365 QQLHGYLIKGTHATLPVILGNALVVMYSRCGNVQTAFKLFDRLPEKDIVSWNTMVTAFVQ 424
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+ + + L L + + F + VT+ +VLSA++ G+L +G+ H +R G+ED +
Sbjct: 425 NDFDLEGLLLVYQMQKSCFAADSVTLTAVLSAASNTGDLQIGKQAHGYLVRRGIEDEGLE 484
Query: 385 NALVDMYAKCHVIADARYIFET--TSEKDVIAWNSIISG-----------------LDDN 425
+ L+DMYAK I A+ +F+ ++D + WN++I+G L +
Sbjct: 485 SYLIDMYAKSGRIEIAQRVFDDYGNVKRDEVTWNAMIAGYTQSGQPEQAILTFRAMLQAS 544
Query: 426 VSPDAVTLVSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P +VTL SV+ AC LG + G +H ++ ++ L +NV+VGTAL++ Y+KCG+ +
Sbjct: 545 LEPTSVTLASVLPACDPLGGGLCAGKQIHCFALRR-CLDTNVFVGTALVDMYSKCGEIST 603
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
A VF M EK+TV+++ MI G G G G +L+LF M + ++P+ V F +SAC++
Sbjct: 604 AEHVFAVMIEKSTVSYTTMISGLGQHGFGERALSLFYYMQEKGLKPDGVTFLAAISACNY 663
Query: 545 TGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD-VSLF 603
+G+V EG + SM F + +H C+VD+LA+AGR+EEA EF++ + E + +S++
Sbjct: 664 SGLVDEGLALYRSM-ETFGVAVTPQHRCCIVDMLAKAGRVEEAYEFVQELGEEGNFISIW 722
Query: 604 GAFLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
G+ L C + +L + +++L E A Y VL+S+++A++G W + +R+ M+
Sbjct: 723 GSLLVSCKAQDKQELVNLATERLLCIEKKYGHAGYNVLLSHIFAAEGNWSSADSLRKEMR 782
Query: 662 QRGLSKSPGCSLVDLDIA-------NDFSFS 685
RGL K G S + + A ND +S
Sbjct: 783 LRGLRKMAGSSWIKVQDAALQSSPKNDHEYS 813
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 160/594 (26%), Positives = 268/594 (45%), Gaps = 86/594 (14%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVL-TGLVDMYAKC---RDIGS 198
D++ +S L AC R + G VH +++ PD+ VL L+++YA C R G
Sbjct: 132 DHYTYSCALTACARTRRLRLGKSVHAHLLRRARSLPDTAVLRNSLLNLYASCMRYRGDGG 191
Query: 199 ---SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTA 255
R++FD +N VSW ++ YV+ QE L LF RM E ++ ++ ++ A
Sbjct: 192 VDVVRRLFDVMPKRNAVSWNTLFGWYVKTGRPQEALELFARMLEDGIKPTPVSFVNVFPA 251
Query: 256 CAKLRALHQGKW---LHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSI 310
AK W L+G ++K G E + L V++ + M+ + G+++ A VF+
Sbjct: 252 VAK----EDPSWSFVLYGLLVKHGREYVNDLFVVSSAIAMFSELGDLQSAWRVFEYTAKK 307
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMV 369
+ W MI GY Q+G +A+ L + P + VT S L+A++Q + +G+ +
Sbjct: 308 NTEVWNTMITGYVQNGKFAEAMDLVIRLMGSKEVPLDVVTFLSALTAASQSQDGRLGQQL 367
Query: 370 HSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-- 425
H I+ VI NALV MY++C + A +F+ EKD+++WN++++ N
Sbjct: 368 HGYLIKGTHATLPVILGNALVVMYSRCGNVQTAFKLFDRLPEKDIVSWNTMVTAFVQNDF 427
Query: 426 ---------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
+ D+VTL +V+SA ++ G +Q+G H Y ++G+ + +
Sbjct: 428 DLEGLLLVYQMQKSCFAADSVTLTAVLSAASNTGDLQIGKQAHGYLVRRGIEDEGLE--S 485
Query: 471 ALLNFYAKCGDAQSARMVFD--AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
L++ YAK G + A+ VFD +++ VTW+AMI GY G ++ F ML +
Sbjct: 486 YLIDMYAKSGRIEIAQRVFDDYGNVKRDEVTWNAMIAGYTQSGQPEQAILTFRAMLQASL 545
Query: 529 QPNEVIFTTILSACSHTG---MVGEGWKCF-------------------YSMCRDFKFV- 565
+P V ++L AC G G+ CF YS C +
Sbjct: 546 EPTSVTLASVLPACDPLGGGLCAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAE 605
Query: 566 --------PSMKHYVCMVDLLARAGRLEEALE---FMENMPIEPDVSLFGAFLHGCGLYS 614
S Y M+ L + G E AL +M+ ++PD F A + C
Sbjct: 606 HVFAVMIEKSTVSYTTMISGLGQHGFGERALSLFYYMQEKGLKPDGVTFLAAISACNYSG 665
Query: 615 RFDLGEVMIKKM----LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
D G + + M + + P C V ++ A G RV + E +++ G
Sbjct: 666 LVDEGLALYRSMETFGVAVTPQHRCCIV---DMLAKAG---RVEEAYEFVQELG 713
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 175/343 (51%), Gaps = 12/343 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV MY G+V+ A +FD +P D S+ M+ + ND + + M+K D
Sbjct: 387 LVVMYSRCGNVQTAFKLFDRLPEKDIVSWNTMVTAFVQNDFDLEGLLLVYQMQKSCFAAD 446
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
+ + VL A D+ G + H +V+ G D + + L+DMYAK I +++VFD+
Sbjct: 447 SVTLTAVLSAASNTGDLQIGKQAHGYLVRRGIEDEGLESYLIDMYAKSGRIEIAQRVFDD 506
Query: 206 --TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL-RAL 262
+ ++ V+W +MIAGY Q+ ++ ++ F M + +E +TL S++ AC L L
Sbjct: 507 YGNVKRDEVTWNAMIAGYTQSGQPEQAILTFRAMLQASLEPTSVTLASVLPACDPLGGGL 566
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H + L+ ++ N + TAL+DMY KCG I A VF + VS+T MI G
Sbjct: 567 CAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFAVMIEKSTVSYTTMISGL 626
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG----RMVHSLGIRLGL 378
Q G+ ++AL LF + P+ VT + +SA G ++ G R + + G+ +
Sbjct: 627 GQHGFGERALSLFYYMQEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVAVTP 686
Query: 379 EDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVIA-WNSII 419
+ I VDM AK + +A ++ E E + I+ W S++
Sbjct: 687 QHRCCI---VDMLAKAGRVEEAYEFVQELGEEGNFISIWGSLL 726
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 7/266 (2%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDS 105
S+ +L +TG L K H L+ G+ ++ + L+ MY G ++ A+ VFD
Sbjct: 447 SVTLTAVLSAASNTGDLQIGKQAHGYLVRRGIEDEGLESYLIDMYAKSGRIEIAQRVFDD 506
Query: 106 MPN--PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL-RDI 162
N D ++ MI Y + + + ++ M + E + + VL AC L +
Sbjct: 507 YGNVKRDEVTWNAMIAGYTQSGQPEQAILTFRAMLQASLEPTSVTLASVLPACDPLGGGL 566
Query: 163 DEGMKVHC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
G ++HC + + + FV T LVDMY+KC +I ++ VF ++K+ VS+T+MI+G
Sbjct: 567 CAGKQIHCFALRRCLDTNVFVGTALVDMYSKCGEISTAEHVFAVMIEKSTVSYTTMISGL 626
Query: 222 VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
Q+ + L LF M+E ++ + +T + ++AC + +G L+ + G+ +
Sbjct: 627 GQHGFGERALSLFYYMQEKGLKPDGVTFLAAISACNYSGLVDEGLALYRSMETFGVAVTP 686
Query: 282 HLVTALLDMYVKCGNIRDARSVFDEL 307
++DM K G + +A EL
Sbjct: 687 QHRCCIVDMLAKAGRVEEAYEFVQEL 712
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 197/652 (30%), Positives = 338/652 (51%), Gaps = 31/652 (4%)
Query: 53 LNLLGLCKSTGSLKA---FHALLIVD--GLTNDK--CNTKLVSMYGSFGHVKYARSVFDS 105
L+LL C + SL+ HAL++ T+ ++SMY G + + VFD
Sbjct: 14 LSLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDK 73
Query: 106 MPNPDFYSFQVMIRWYFLNDLYKDI--VEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
MP S+ ++ Y I +E Y M + F+ +L+A L
Sbjct: 74 MPRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWW 133
Query: 164 EGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G +H + K+G D + T L++MY+ C D+ S+ VF + +D++ V+W S+I GY++
Sbjct: 134 FGSSLHAKGFKLGLNDICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLK 193
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
N+ +EG+ LF +M Q T ++ +C++L+ G+ +H +++ + ++ HL
Sbjct: 194 NNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHL 253
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
AL+DMY GN++ A +F + + DLVSW +MI GY+++ +KA+ LF + F
Sbjct: 254 QNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCF 313
Query: 344 -FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADAR 401
P+ T A ++SA+ + + G+ +H+ I+ G E + + LV MY K H A
Sbjct: 314 PKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAW 373
Query: 402 YIFETTSEKDVIAWNSIISG---LDDNVSP--------------DAVTLVSVISACASLG 444
+F + S KDV+ W +I+G + D + D L V++ACA+L
Sbjct: 374 RVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLA 433
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
++ G +H Y+ K G + V +L++ YAK G ++A +VF + E + W++M+
Sbjct: 434 VLRQGEIIHCYAVKLG-YDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSML 492
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GGY G +L +F ++L + + P++V F ++LSACSH+ +V +G K ++
Sbjct: 493 GGYSHHGMVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQG-KFLWNYMNSIGL 551
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMP-IEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+P +KHY CMV L +RA LEEA E + P IE ++ L+ L C + F +G
Sbjct: 552 IPGLKHYSCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHAA 611
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+++L L + VL+SNLYA+ +W +V ++R M+ L K PG S ++
Sbjct: 612 EEVLRLKAEDGPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKYPGLSWIE 663
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 183/613 (29%), Positives = 317/613 (51%), Gaps = 27/613 (4%)
Query: 90 YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVF 149
Y +G + A+ +FD M S+ ++I Y Y + + R + D F +
Sbjct: 54 YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113
Query: 150 SKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ VL AC +++D G +H + G G F+ L+DMY KC I +R +F+ + +
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC--AKLRALHQGK 266
+ VSW S+I GY + +E L L +M + N TLGS + +C + GK
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGK 233
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
LHGY +K G++++ + TALLDMY K G + DA +F + ++V + AMI G+ Q+
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTE 293
Query: 327 YPDK-----ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
DK ALKLF+ + P+ T +S++ + G+ +H+ + ++ D
Sbjct: 294 DIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSD 353
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
+ + L+++Y+ D F +T + D+++W ++I+G N
Sbjct: 354 EFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLA 413
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
PD + +++SACA + A + G +H Y+ K G+ + + V + ++ YAK G+
Sbjct: 414 SGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAI-VQNSQISMYAKSGNLD 472
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
SA++ F+ ++ + V+WS MI G ++ LF M + + PN++ F +L+ACS
Sbjct: 473 SAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACS 532
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G+V EG + + SM +D+ ++KH C+VDLL+RAGRL +A F+ N ++
Sbjct: 533 HGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMW 592
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
L GC +Y G+ + +K++EL P ++ YVL+ N+Y G + ++RELMK R
Sbjct: 593 RTLLSGCRIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDR 652
Query: 664 GLSKSPGCSLVDL 676
G+ K PG S +++
Sbjct: 653 GIRKEPGQSWIEV 665
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 238/483 (49%), Gaps = 31/483 (6%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D+ ++K+++ + G H ++K P F+L +++Y+K ++G+++++F
Sbjct: 8 DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
D +++V+S+ +I+GY + + LF+ R ++ ++ + +++AC +++
Sbjct: 68 DRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDFA 127
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
GK +HG + G+ L L+DMY KC I AR +F+ +D VSW ++I GY
Sbjct: 128 LGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYA 187
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVL-SASAQLGNL-NMGRMVHSLGIRLGLE-D 380
+ G ++ LKL N T+ S L S L N+ + G+ +H ++ GL+ D
Sbjct: 188 RVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLD 247
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------------ 422
V AL+DMYAK + DA +F T+ ++V+ +N++I+G
Sbjct: 248 IVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLF 307
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ P T S+I C + A + G +HA+ K + S+ ++G+ L+ Y+
Sbjct: 308 SQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHN-IQSDEFIGSTLIELYSL 366
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
G + F++ + + V+W+ MI GY G +LALF ++L +P+E I TT+
Sbjct: 367 LGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTM 426
Query: 539 LSACSHTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
LSAC+ G + Y++ + +++ + + A++G L+ A E +
Sbjct: 427 LSACADVAAERSGEQVHGYAVKTGIGTLAIVQN--SQISMYAKSGNLDSAKITFEEIK-N 483
Query: 598 PDV 600
PDV
Sbjct: 484 PDV 486
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 222/469 (47%), Gaps = 28/469 (5%)
Query: 66 KAFHALLIVDGLTNDKCNTKL-VSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H L IV GL T L + MY + +AR +F+S D S+ +I Y
Sbjct: 130 KVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLITGYARV 189
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC-CELRD-IDEGMKVHCEIVKVG-GPDSF 181
Y+++++ M + F LK+C L + + G +H VK G D
Sbjct: 190 GAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGLDLDIV 249
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN-----DCAQEGLVLFNR 236
V T L+DMYAK +G + Q+F + ++NVV + +MIAG++Q +CA E L LF++
Sbjct: 250 VGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAYEALKLFSQ 309
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M+ ++ + T S++ C + A GK +H +I K I+ + + + L+++Y G+
Sbjct: 310 MQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGS 369
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
D F+ +D+VSWT MI GY Q+G + AL LF + + P+ I ++LSA
Sbjct: 370 TEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSA 429
Query: 357 SAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAW 415
A + G VH ++ G+ ++ N+ + MYAK + A+ FE DV++W
Sbjct: 430 CADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSW 489
Query: 416 NSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
+ +I + + P+ +T + V++AC+ G V+ G + K
Sbjct: 490 SVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYESMKK 549
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSAR-MVFDAMREKNTVTWSAMIGG 506
+ NV T +++ ++ G A+ + ++ + V W ++ G
Sbjct: 550 DYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSG 598
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 308/628 (49%), Gaps = 71/628 (11%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
KA L +V + C +++ Y G A+ VF+ MP D S+ M+ Y N
Sbjct: 128 KARELLELVPDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNG 187
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG 185
++F++ M +R N + + +K+ D+ ++ K+ P++
Sbjct: 188 KMHLALQFFESMTERNVVSWNLMVAGYVKSG----DLSSAWQL---FEKIPNPNAVSWVT 240
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
++ AK + +R++FD KNVVSW +MIA YVQ+ E + LF +M +
Sbjct: 241 MLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKM----PHKD 296
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
++ +++ ++ L + + ++ + I TAL+ ++ G I +A +F
Sbjct: 297 SVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQ----TALMSGLIQNGRIDEADQMFS 352
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ + D+V W +MI GY++SG D+AL LF N V+ +++S AQ G ++
Sbjct: 353 RIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMP----IKNSVSWNTMISGYAQAGQMD- 407
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-LDD 424
A IF+ EK++++WNS+I+G L +
Sbjct: 408 ---------------------------------RATEIFQAMREKNIVSWNSLIAGFLQN 434
Query: 425 NV----------------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
N+ PD T +SACA+L A+QVG+ LH Y K G + ++++V
Sbjct: 435 NLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYM-NDLFV 493
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
G AL+ YAKCG QSA VF + + ++W+++I GY + G + F M +E V
Sbjct: 494 GNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERV 553
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
P+EV F +LSACSH G+ +G F M DF P +HY C+VDLL R GRLEEA
Sbjct: 554 VPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAF 613
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+ M ++ + L+G+ L C ++ +LG +++ EL P A Y+ +SN++A G
Sbjct: 614 NTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAG 673
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDL 676
RW V +VR LM+ + K PGCS +++
Sbjct: 674 RWEEVERVRMLMRGKRAGKQPGCSWIEV 701
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 173/387 (44%), Gaps = 51/387 (13%)
Query: 280 NSHLVT--ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
+ +LVT +++ + K IRDAR +FD++ +LVSW MI GY + ++A +LF
Sbjct: 45 HKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELF-- 102
Query: 338 KKWADFFP--NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCH 395
D P ++ + A +++ + G L R + L + D NA++ YAK
Sbjct: 103 ----DVMPERDNFSWALMITCYTRKGKLEKAREL--LELVPDKLDTACWNAMIAGYAKKG 156
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDNVSP-------DAVTLVSVIS-ACASLGAVQ 447
DA+ +FE KD++++NS+++G N +++T +V+S G V+
Sbjct: 157 QFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVK 216
Query: 448 VGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGY 507
G A+ + + + N +L AK G AR +FD M KN V+W+AMI Y
Sbjct: 217 SGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATY 276
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM-CRDFKFVP 566
++ LF M +++ V +TTI++ G + E + + M C+D
Sbjct: 277 VQDLQVDEAVKLFKKMPHKD----SVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQT 332
Query: 567 SM----------------------KHYVCMVDLLA---RAGRLEEALEFMENMPIEPDVS 601
++ VC ++A R+GR++EAL MPI+ VS
Sbjct: 333 ALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVS 392
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+ + G + D + + M E
Sbjct: 393 -WNTMISGYAQAGQMDRATEIFQAMRE 418
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 143/316 (45%), Gaps = 32/316 (10%)
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
QLG L G++ ++ I + ++ N+++ + AK I DAR +F+ S +++++WN
Sbjct: 26 QLGKL--GKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWN 83
Query: 417 SIISG-LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS----------- 464
++I+G L +N+ +A L V+ + + + Y+ K L +
Sbjct: 84 TMIAGYLHNNMVEEASELFDVMPERDNFSWALM---ITCYTRKGKLEKARELLELVPDKL 140
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
+ A++ YAK G A+ VF+ M K+ V++++M+ GY G +L F M
Sbjct: 141 DTACWNAMIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESM- 199
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ N V + +++ +G + W+ F + P+ +V M+ LA+ G++
Sbjct: 200 ---TERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPN-----PNAVSWVTMLCGLAKYGKM 251
Query: 585 EEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLY 644
EA E + MP + VS + A + + D + KKM H D + ++ N Y
Sbjct: 252 AEARELFDRMPSKNVVS-WNAMIATYVQDLQVDEAVKLFKKM--PHKDSVSWTTII-NGY 307
Query: 645 ASDGRWIRVNQVRELM 660
G+ QV M
Sbjct: 308 IRVGKLDEARQVYNQM 323
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 270/470 (57%), Gaps = 28/470 (5%)
Query: 235 NRMREGFV-------EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
R+RE + + N +++ C + RA+ +G+ +H +++K +L T L
Sbjct: 40 TRLREALLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRL 99
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ YVKC ++RDAR VFD + ++VSWTAMI Y+Q GY +AL LF + PN
Sbjct: 100 IVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNE 159
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFET 406
T A+VL++ +GR +HS I+L E + + ++L+DMYAK I +AR IF+
Sbjct: 160 FTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQC 219
Query: 407 TSEKDVIAWNSIISG-----LDDN------------VSPDAVTLVSVISACASLGAVQVG 449
E+DV++ +IISG LD+ + + VT SV++A + L A+ G
Sbjct: 220 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHG 279
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H + + + S V + +L++ Y+KCG+ AR +FD + E+ ++W+AM+ GY
Sbjct: 280 KQVHNHLLRSEV-PSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSK 338
Query: 510 QGDGGGSLALFSDMLNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR-DFKFVPS 567
G+G L LF+ M++E +V+P+ V +LS CSH G+ +G FY M P
Sbjct: 339 HGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPD 398
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
KHY C+VD+L RAGR+E A EF++ MP EP +++G L C ++S D+GE + ++L
Sbjct: 399 SKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLL 458
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
++ P+ A YV++SNLYAS GRW V +R LM ++ ++K PG S ++LD
Sbjct: 459 QIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELD 508
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 145/461 (31%), Positives = 231/461 (50%), Gaps = 61/461 (13%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
++ VL C R I EG +VH ++K P ++ T L+ Y KC + +R VFD
Sbjct: 61 YNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMP 120
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
++NVVSWT+MI+ Y Q A + L LF +M E N+ T +++T+C G+
Sbjct: 121 ERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQ 180
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H +I+K+ E + ++ ++LLDMY K G I +AR +F L D+VS TA+I GY Q G
Sbjct: 181 IHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGL 240
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NA 386
++AL+LF + N+VT SVL+A + L L+ G+ VH+ +R + Y V+ N+
Sbjct: 241 DEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNS 300
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDN-VSP 428
L+DMY+KC + AR IF+T E+ VI+WN+++ G +D+N V P
Sbjct: 301 LIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKP 360
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
D+VT+++V+S C+ G G + Y G +S D++ V
Sbjct: 361 DSVTVLAVLSGCSHGGLEDKGMDIF-YDMTSGKISVQ--------------PDSKHYGCV 405
Query: 489 FDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS-HTGM 547
D M G G A F + +P+ I+ +L ACS H+ +
Sbjct: 406 VD------------------MLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNL 447
Query: 548 -VGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEE 586
+GE + + + P + +YV + +L A AGR E+
Sbjct: 448 DIGE-----FVGHQLLQIEPENAGNYVILSNLYASAGRWED 483
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 6/282 (2%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T+L+ Y ++ AR VFD MP + S+ MI Y + + M + E
Sbjct: 97 TRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTE 156
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
+ F F+ VL +C G ++H I+K+ +V + L+DMYAK I +R +
Sbjct: 157 PNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGI 216
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F +++VVS T++I+GY Q +E L LF R++ ++ N +T S++TA + L AL
Sbjct: 217 FQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAAL 276
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H ++L+ + L +L+DMY KCGN+ AR +FD L ++SW AM+VGY
Sbjct: 277 DHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGY 336
Query: 323 TQSGYPDKALKLFT---DKKWADFFPNHVTIASVLSASAQLG 361
++ G + L+LF D+ P+ VT+ +VLS + G
Sbjct: 337 SKHGEGREVLELFNLMIDENKVK--PDSVTVLAVLSGCSHGG 376
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%), Gaps = 14/226 (6%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+ L+ MY G + AR +F +P D S +I Y L ++ +E ++ +++ +
Sbjct: 198 SSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQ 257
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQV 202
+ ++ VL A L +D G +VH +++ P VL L+DMY+KC ++ +R++
Sbjct: 258 SNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRI 317
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRA 261
FD ++ V+SW +M+ GY ++ +E L LFN M E V+ + +T+ ++++ C+
Sbjct: 318 FDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCS---- 373
Query: 262 LHQGKWLHGYIL-------KIGIEINSHLVTALLDMYVKCGNIRDA 300
H G G + KI ++ +S ++DM + G + A
Sbjct: 374 -HGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAA 418
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 170/507 (33%), Positives = 277/507 (54%), Gaps = 20/507 (3%)
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y + + + + F+ +N+ SW +++A + +N C + L LF RM + + L
Sbjct: 57 YIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNL 116
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
V AC L K H +K+ +E + ++ AL+++Y + G++ +A VF+E+
Sbjct: 117 VFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPL 176
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+ V W MI G+ +LF+ + + F + + ++ A + G+
Sbjct: 177 KNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTF 236
Query: 370 HSLGIRLGLED--YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------ 421
H L I+ D + + +LVDMY KC + A +FE S +DV+ W++II+G
Sbjct: 237 HGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGR 296
Query: 422 -----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
L D+V+P++VT S++ AC+SLG+++ G S+H Y + G+ +V T
Sbjct: 297 ALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGV-ELDVKNYT 355
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
+ ++ YAKCG +A VF + EKN +WS MI G+GM G +L LF +M + P
Sbjct: 356 SFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLP 415
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
N V F ++LSACSH+G + EGW F SM RD+ P +HY CMVDLL RAG+++EAL F
Sbjct: 416 NSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSF 475
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
+ NMP EP S +GA L C ++ R +L E + KK+L L D++ YV++SN+YA G W
Sbjct: 476 INNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMW 535
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVDLD 677
V + R M ++G+ K G + ++++
Sbjct: 536 EMVKKTRLKMCEKGIHKIVGFTSIEIE 562
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 227/482 (47%), Gaps = 24/482 (4%)
Query: 48 PSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLV-SMYGSFGHVKYARSVFDSM 106
P+ L+L K+ S +A ++V+ L ++ Y G + A F+ +
Sbjct: 14 PTKTLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHI 73
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
+ +S+ ++ + N + D+++ +K M K K D+F +KAC L
Sbjct: 74 TFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAK 133
Query: 167 KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
H +K+ D +V L+++Y + + + +VF+E KN V W MI G++
Sbjct: 134 LFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFS 193
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLV 284
LF+RMR E + + L+ AC + A +GK HG +K I+ N L
Sbjct: 194 EEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQ 253
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
T+L+DMY+KCG + A +F+E+ D+V W+A+I G+ ++G +++ +F
Sbjct: 254 TSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVT 313
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYI 403
PN VT AS++ A + LG+L GR VH IR G+E D + +DMYAKC I A +
Sbjct: 314 PNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRV 373
Query: 404 FETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAV 446
F EK+V +W+++I+G N P++VT VSV+SAC+ G +
Sbjct: 374 FCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRI 433
Query: 447 QVG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTVTWSAMI 504
+ G S + S G+ + +++ + G A + M E W A++
Sbjct: 434 EEGWSHFKSMSRDYGITPVEEHYA-CMVDLLGRAGKIDEALSFINNMPTEPGASAWGALL 492
Query: 505 GG 506
G
Sbjct: 493 GA 494
>gi|115484979|ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|62734753|gb|AAX96862.1| Similar to selenium-binding protein [Oryza sativa Japonica Group]
gi|77549625|gb|ABA92422.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644855|dbj|BAF27996.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|125597201|gb|EAZ36981.1| hypothetical protein OsJ_21321 [Oryza sativa Japonica Group]
Length = 582
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 279/501 (55%), Gaps = 23/501 (4%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDC-AQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+R+VFD ++ W +++ + + A++ L L+ RMR V + T ++ ACA
Sbjct: 75 ARRVFDAAPSRDAYMWNTLLRAHAHSRAHARDALALYARMRAAGVAPDHYTYPIVLPACA 134
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWT 316
RA G+ HG ++ + + + +AL+ MY + G +RDA VF E + +VSWT
Sbjct: 135 AARAPRLGRAAHGDAVRFALARDGFVSSALISMYSQEGEVRDAERVFAERDDARTVVSWT 194
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
AM+ GY Q+ + +A+ LF+D A PN +T+ S L L +G MVH ++L
Sbjct: 195 AMVAGYAQNCFFGEAVTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGFVVKL 254
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------- 421
G + + ++NAL+ MY +C AR +F S + +++WN++++
Sbjct: 255 GFDANVPMVNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFF 314
Query: 422 ---LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
L + V D VTLVSV+SACA GA+ G +H + GL ++ +G L++ YAK
Sbjct: 315 RRMLTEKVGFDCVTLVSVLSACARSGALGTGKWVHELARSHGL-DTDARIGNVLVDMYAK 373
Query: 479 CGDAQSARMVFDA--MREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
CG+ A+ VF + +R + V+WSAMI Y G+ +L LFS M NE V+PN FT
Sbjct: 374 CGEIAYAKEVFHSHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSFTFT 433
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+L AC H+G+V EG K F S+ D++ P+++HY CMVD+L RAGRL EA + MPI
Sbjct: 434 AVLMACCHSGLVDEGLKHFNSIATDYQMSPTLEHYACMVDMLGRAGRLVEAYGIIRGMPI 493
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
PD ++GAFL GC L+ +L E + K++ + + +YVL++N+Y G ++
Sbjct: 494 RPDKCVWGAFLGGCRLHGMVELAEYVAKELFDSGSNDVTFYVLMANMYFEAGMLEDAERI 553
Query: 657 RELMKQRGLSKSPGCSLVDLD 677
R +MK+ L K+ G SLV D
Sbjct: 554 RGVMKEMELKKTAGHSLVCTD 574
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 226/468 (48%), Gaps = 26/468 (5%)
Query: 69 HALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA +V G++ N T L++ + YAR VFD+ P+ D Y + ++R + + +
Sbjct: 45 HARAVVLGISANPAFATSLITAVAP-ACLAYARRVFDAAPSRDAYMWNTLLRAHAHSRAH 103
Query: 128 -KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+D + Y MR D++ + VL AC R G H + V+ D FV +
Sbjct: 104 ARDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFALARDGFVSSA 163
Query: 186 LVDMYAKCRDIGSSRQVFDETLD-KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ MY++ ++ + +VF E D + VVSWT+M+AGY QN E + LF+ M V
Sbjct: 164 LISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGEAVTLFSDMVAAGVLP 223
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N+ITL S + L G+ +HG+++K+G + N +V AL+ MY +CG+ AR +F
Sbjct: 224 NEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALITMYGRCGSAPVARVLF 283
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ + S LVSW M+ Y Q G +A+K F + VT+ SVLSA A+ G L
Sbjct: 284 NGMSSRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALG 343
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK--DVIAWNSIISG 421
G+ VH L GL+ D + N LVDMYAKC IA A+ +F + + V++W+++I+
Sbjct: 344 TGKWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAMINA 403
Query: 422 L-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
++ V P++ T +V+ AC G V G +S
Sbjct: 404 YANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCHSGLVDEGLKHFNSIATDYQMSP 463
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQG 511
+ +++ + G A + M + W A +GG + G
Sbjct: 464 TLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCVWGAFLGGCRLHG 511
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 193/449 (42%), Gaps = 35/449 (7%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP-DFYSFQVMIRWYFL 123
+A H + L D ++ L+SMY G V+ A VF + S+ M+ Y
Sbjct: 143 RAAHGDAVRFALARDGFVSSALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQ 202
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
N + + V + M + L + G VH +VK+G + +
Sbjct: 203 NCFFGEAVTLFSDMVAAGVLPNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPM 262
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
+ L+ MY +C +R +F+ + +VSW +M+A Y Q+ + + F RM V
Sbjct: 263 VNALITMYGRCGSAPVARVLFNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKV 322
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ +TL S+++ACA+ AL GKW+H G++ ++ + L+DMY KCG I A+
Sbjct: 323 GFDCVTLVSVLSACARSGALGTGKWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKE 382
Query: 303 VFDE--LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
VF L +VSW+AMI Y G ++ALKLF+ + PN T +VL A
Sbjct: 383 VFHSHGLRGHSVVSWSAMINAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCHS 442
Query: 361 GNLNMG-RMVHSLG----IRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
G ++ G + +S+ + LE Y +VDM + + +A
Sbjct: 443 GLVDEGLKHFNSIATDYQMSPTLEHYAC---MVDMLGRAGRLVEA--------------- 484
Query: 416 NSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
II G+ + PD + + C G V++ + G S++V + N
Sbjct: 485 YGIIRGMP--IRPDKCVWGAFLGGCRLHGMVELAEYVAKELFDSG--SNDVTFYVLMANM 540
Query: 476 YAKCG---DAQSARMVFDAMREKNTVTWS 501
Y + G DA+ R V M K T S
Sbjct: 541 YFEAGMLEDAERIRGVMKEMELKKTAGHS 569
>gi|297813281|ref|XP_002874524.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320361|gb|EFH50783.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 688
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 202/647 (31%), Positives = 327/647 (50%), Gaps = 57/647 (8%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
++SMY F + A VFD M + ++ M+ Y + +E Y+ M + +E
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMTERNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEE 103
Query: 144 HDN-FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
N F++S VLKAC + DI G V+ I K D ++ +VDM+ K + +
Sbjct: 104 AANEFIYSAVLKACGLVGDIQLGSFVYERIGKENLKGDVVLMNSVVDMFVKNGRLSEANS 163
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE-----------GFVE-GNQITL 249
F E L N SW ++I+GY + +E + LFNR+ + GFV+ G+ L
Sbjct: 164 SFKEILRPNSTSWNTLISGYCKAGMVEEAVSLFNRIPQPNIVSWNCLISGFVDKGSPRAL 223
Query: 250 GSLV------------------TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
LV AC+ L GK LHG ++K G+E + ++AL+DMY
Sbjct: 224 EFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHGCVVKSGLESSPFALSALIDMY 283
Query: 292 VKCGNIRDARSVFDE----LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
CG++ DA VF + LC+ V W +M+ G+ + + AL L +D +
Sbjct: 284 SNCGSLSDAADVFHQEKPALCNTVAV-WNSMLSGFLINEENEAALGLLLLLYKSDLCFDS 342
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
T++ L L NL +G VHSL + G E DY V + LVD++A I +A +F
Sbjct: 343 YTLSGALKICINLVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQEAHKLFHR 402
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
KD+IA++ +I G + + D + S++ C+SL ++ G
Sbjct: 403 LPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSSILKVCSSLASLGCG 462
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H K+G S V TAL + Y KCG+ ++ ++FD M E++ V+W+ +I G+G
Sbjct: 463 KQIHGLCIKKGYQSEPV-TATALGDMYVKCGEIDNSVVLFDGMLERDVVSWTGIIVGFGQ 521
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G + F M+N E++PNEV F +LSAC H+G++ E +M ++ P ++
Sbjct: 522 NGRVEEAFQYFHKMINSEIEPNEVTFLGLLSACRHSGLLEEARSILETMKCEYGLEPYLE 581
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY C+VDLL +AGR +EA E ++ MP+EPD +++ + L CG + L V+ +K+L+
Sbjct: 582 HYYCVVDLLGQAGRFQEAEELIKKMPLEPDKTIWMSLLTACGTHKNAGLITVIAEKLLKA 641
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P+ Y +SN YA+ G W ++++VRE K+ G +K G S ++
Sbjct: 642 FPEDPSLYTSLSNAYATLGMWDQLSEVREAAKKLG-AKESGMSWIEF 687
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 183/421 (43%), Gaps = 83/421 (19%)
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C K++A +G+ + +I+K GI N L ++ MYV + DA VFDE+ ++V+W
Sbjct: 15 CGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMTERNIVTW 74
Query: 316 TAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
T M+ GYT G P KA++L+ + + N ++VL A +G++ +G V+
Sbjct: 75 TTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGLVGDIQLGSFVYE--- 131
Query: 375 RLGLE----DYTVINALVDM-------------------------------YAKCHVIAD 399
R+G E D ++N++VDM Y K ++ +
Sbjct: 132 RIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTLISGYCKAGMVEE 191
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNVSP----------------DAVTLVSVISACASL 443
A +F + ++++WN +ISG D SP D L + AC+
Sbjct: 192 AVSLFNRIPQPNIVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK--NTVT-W 500
G + +G LH K GL SS + +AL++ Y+ CG A VF + NTV W
Sbjct: 252 GLLTMGKQLHGCVVKSGLESSP-FALSALIDMYSNCGSLSDAADVFHQEKPALCNTVAVW 310
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC-----------SHTGMVG 549
++M+ G+ + + +L L + ++ + + L C H+ +V
Sbjct: 311 NSMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHSLVVV 370
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
G++ Y V S+ +VDL A G ++EA + +P D+ F + G
Sbjct: 371 SGYELDY-------IVGSI-----LVDLHANVGNIQEAHKLFHRLP-NKDIIAFSGLIRG 417
Query: 610 C 610
C
Sbjct: 418 C 418
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 194/634 (30%), Positives = 328/634 (51%), Gaps = 30/634 (4%)
Query: 67 AFHALLIVDGLTNDKCNTKLVSMYG----SFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
AFH GL ++ +L+S G VK + D+ + S ++ Y
Sbjct: 243 AFH----TSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKILSGYL 298
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFV 182
Y +++ + M + E D F VL L + G +VHC +K+G
Sbjct: 299 HAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLT 358
Query: 183 LTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
++ L++MY K R IG +R VF+ +++++SW S+IAG Q+D E + LF ++
Sbjct: 359 VSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCG 418
Query: 242 VEGNQITLGSLVTACAKL-RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
++ + T+ S++ A + L L K +H + +K +S + TAL+D Y + +++A
Sbjct: 419 LKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEA 478
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+F + DLV+W AM+ GYTQS K L+LF + T+A+VL L
Sbjct: 479 EVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFL 537
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
+N G+ VH+ I+ G + D V + ++DMY KC ++ A++ F++ D +AW ++I
Sbjct: 538 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLI 597
Query: 420 SGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
SG +N V PD T+ ++ A + L A++ G +HA + K
Sbjct: 598 SGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNC- 656
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+S+ +VGT+L++ YAKCG A +F + N W+AM+ G G+G +L LF
Sbjct: 657 TSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQ 716
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M + ++P++V F +LSACSH+G+V E +K SM RD+ P ++HY C+ D L RAG
Sbjct: 717 MESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAG 776
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
++EA +++M +E S++ L C + + G+ + K+LEL P + YVL+SN
Sbjct: 777 LVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSN 836
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+YA+ +W + R +MK + K PG S +++
Sbjct: 837 MYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEV 870
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 132/550 (24%), Positives = 247/550 (44%), Gaps = 61/550 (11%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN-----DLYKDIVEFYKCMRKR 140
L+SMY G + YAR VFD MP D S+ ++ Y + + K+ ++ +R+
Sbjct: 87 LISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQD 146
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
+ S +LK C + H K+G D FV LV++Y K +
Sbjct: 147 VVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEG 206
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R +F+E ++VV W M+ Y++ +E + L + + N+ITL
Sbjct: 207 RVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITL---------- 256
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L++ + + G ++ + D +++S ++
Sbjct: 257 ----------------------RLLSRISGDDSEAGQVKSFENGNDASAVSEIISRNKIL 294
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY +G LK F D +D + VT VL+ + +L +L +G+ VH + ++LGL+
Sbjct: 295 SGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLD 354
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
TV N+L++MY K I AR +F SE+D+I+WNS+I+G+ +
Sbjct: 355 LMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQL 414
Query: 426 ----VSPDAVTLVSVISACASLG-AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ PD T+ SV+ A +SL + + +H ++ K ++ + +V TAL++ Y++
Sbjct: 415 LRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADS-FVSTALIDAYSRNR 473
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ A ++F + V W+AM+ GY DG +L LF+ M + + ++ T+L
Sbjct: 474 CMKEAEVLF-GRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLK 532
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
C + +G K ++ + + ++D+ + G + A +++P+ DV
Sbjct: 533 TCGFLFAINQG-KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 591
Query: 601 SLFGAFLHGC 610
+ + + GC
Sbjct: 592 A-WTTLISGC 600
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 198/389 (50%), Gaps = 21/389 (5%)
Query: 161 DIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
D+ G H I+ + P+ F++ L+ MY+KC + +R+VFD+ ++++VSW S++A
Sbjct: 61 DLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILA 120
Query: 220 GYVQN-----DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILK 274
Y Q+ + +E +LF +R+ V +++TL ++ C + + HGY K
Sbjct: 121 AYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACK 180
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKL 334
IG++ + + AL+++Y+K G +++ R +F+E+ D+V W M+ Y + G+ ++A+ L
Sbjct: 181 IGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 240
Query: 335 FTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKC 394
+ + PN +T+ + S G+ + V S E+ +A+ ++ ++
Sbjct: 241 SSAFHTSGLHPNEITLRLLSRIS---GDDSEAGQVKS------FENGNDASAVSEIISRN 291
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
+++ + + ++ + ++ ++ D VT + V++ L ++ +G +H
Sbjct: 292 KILSGYLHAGQYSA-----LLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHC 346
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+ K G L + V +L+N Y K AR VF+ M E++ ++W+++I G
Sbjct: 347 MALKLG-LDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEV 405
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACS 543
++ LF +L ++P+ T++L A S
Sbjct: 406 EAVCLFMQLLRCGLKPDHYTMTSVLKAAS 434
>gi|359474850|ref|XP_002277741.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
gi|297744624|emb|CBI37886.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 190/613 (30%), Positives = 327/613 (53%), Gaps = 22/613 (3%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
+KL+S Y G + A +F+ +P D S+ +MI Y N + +E + MR
Sbjct: 30 SKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGFRRKSMELFSQMRISSLV 89
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQV 202
+F VL + L D G VH I+K G F V+T L++ YAKC ++ S +V
Sbjct: 90 PTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGNVVDSYRV 149
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F++ + +VS +++++G+V N+ +E +VLFN+ R+ + N T+ +L+ AC L +
Sbjct: 150 FEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTLIRACVALESR 209
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+ +HG ++K+ + ++ + ++LDMY ++ A VF+ + D++SWT MI
Sbjct: 210 RLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISWTTMINLL 269
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDY 381
Y AL LF + + V + +++SA A LG+L GR +H+ I G +
Sbjct: 270 VCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQAIVCGFGSEL 329
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP------------- 428
+ N+++ MY+KC + +R +F+ T+ K +++W ++I G N P
Sbjct: 330 PLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCVQNGYPREALKLLIKMRGE 389
Query: 429 -----DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
D++ L+ V+SA L +++ LH Y+ + G + V +L++ Y+KCGD +
Sbjct: 390 ESFYLDSIMLIGVLSASGELALLELCQQLHCYAFESGFPRYRL-VQNSLISAYSKCGDVE 448
Query: 484 SARMVFDAMRE-KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A VF M ++ V+W+A++ GYG+ G G ++AL+ +M P+ + +LSAC
Sbjct: 449 PAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRKGRENPDAATYLCVLSAC 508
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
SH+G+V +G F M + PS H C+VDLLARAG +A EF+ + +
Sbjct: 509 SHSGLVDDGLVIFNQMVEERTIRPSQDHCGCIVDLLARAGCFSDAREFVSRYMEKMGPNA 568
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+ A L GC L+ L E+ +++ EL P++ VL+SN+YAS GR+ +R MK+
Sbjct: 569 WRALLSGCQLHGNVGLAELAARRVCELDPEEPGQVVLLSNVYASVGRFQDAEALRASMKK 628
Query: 663 RGLSKSPGCSLVD 675
+ L K+PG SL++
Sbjct: 629 KELIKNPGISLLN 641
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 260/541 (48%), Gaps = 40/541 (7%)
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
G D + L+ Y K DI ++ ++F+E ++VVSW+ MI GY +N ++ + LF++
Sbjct: 23 GSDPINYSKLLSCYLKSGDIINAGKLFEEIPKRDVVSWSIMIHGYNRNGFRRKSMELFSQ 82
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
MR + T+ ++ + A L G+ +HG ILK G++ + +VTALL+ Y KCGN
Sbjct: 83 MRISSLVPTSFTMVGVLVSIAGLGDPVLGQCVHGLILKYGLDSDFRVVTALLNAYAKCGN 142
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ D+ VF++L + LVS +A++ G+ + ++A+ LF + PN T+ +++ A
Sbjct: 143 VVDSYRVFEQLENPGLVSCSAIVSGFVYNELFEEAVVLFNQFRKLGMVPNAATVLTLIRA 202
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
L + + +H + ++L L D V N+++DMY+ + A +FE +DVI+W
Sbjct: 203 CVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSSMLDLDAATRVFEGMECRDVISW 262
Query: 416 NSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
++I+ L + + D V ++++ISACA LG ++ G +H +
Sbjct: 263 TTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNLISACAILGDLKRGREIHTQAIV 322
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G S + + +++ Y+KCGD S+R VFD K+ V+W+AMI G G +L
Sbjct: 323 CG-FGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSLVSWTAMILGCVQNGYPREALK 381
Query: 519 LFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD---FKFVPSMKHYV-- 572
L M EE + ++ +LSA G +C+ + F Y
Sbjct: 382 LLIKMRGEESFYLDSIMLIGVLSA--------SGELALLELCQQLHCYAFESGFPRYRLV 433
Query: 573 --CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE-- 628
++ ++ G +E A M D+ + A L+G G+ ++ + +M +
Sbjct: 434 QNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHGEIAVALYHEMRKGR 493
Query: 629 LHPDKACYYVLVSNLYAS---DGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
+PD A Y ++S S D + NQ+ E R GC + L A FS +
Sbjct: 494 ENPDAATYLCVLSACSHSGLVDDGLVIFNQMVEERTIRPSQDHCGCIVDLLARAGCFSDA 553
Query: 686 R 686
R
Sbjct: 554 R 554
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 221/470 (47%), Gaps = 45/470 (9%)
Query: 41 FASFHSLPSIP----CLNLLGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGS 92
F F L +P L L+ C + S + + H +++ L D N ++ MY S
Sbjct: 181 FNQFRKLGMVPNAATVLTLIRACVALESRRLCESIHGMVVKLSLVLDVAVNNSVLDMYSS 240
Query: 93 FGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKV 152
+ A VF+ M D S+ MI + D + ++ MR +D V +
Sbjct: 241 MLDLDAATRVFEGMECRDVISWTTMINLLVCLEYASDALMLFRQMRNTGICNDVVVVMNL 300
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNV 211
+ AC L D+ G ++H + + G LT ++ MY+KC D+ SSR VFD+T K++
Sbjct: 301 ISACAILGDLKRGREIHTQAIVCGFGSELPLTNSIIAMYSKCGDLDSSRTVFDQTTGKSL 360
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMR--EGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
VSWT+MI G VQN +E L L +MR E F + I L +++A +L L + LH
Sbjct: 361 VSWTAMILGCVQNGYPREALKLLIKMRGEESFYL-DSIMLIGVLSASGELALLELCQQLH 419
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-DLVSWTAMIVGYTQSGYP 328
Y + G + +L+ Y KCG++ A +VF ++ I D+VSW A++ GY +G+
Sbjct: 420 CYAFESGFPRYRLVQNSLISAYSKCGDVEPAYNVFGQMGYIRDIVSWNAILNGYGINGHG 479
Query: 329 DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHSLGIRLGLEDYTV 383
+ A+ L+ + + P+ T VLSA + G ++ G +MV IR +D+
Sbjct: 480 EIAVALYHEMRKGRENPDAATYLCVLSACSHSGLVDDGLVIFNQMVEERTIRPS-QDHC- 537
Query: 384 INALVDMYAKCHVIADARYIFETTSEK-DVIAWNSIISG--LDDNV-------------- 426
+VD+ A+ +DAR EK AW +++SG L NV
Sbjct: 538 -GCIVDLLARAGCFSDAREFVSRYMEKMGPNAWRALLSGCQLHGNVGLAELAARRVCELD 596
Query: 427 --SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
P V L+S + AS+G Q +L A K+ L+ + G +LLN
Sbjct: 597 PEEPGQVVLLSNVY--ASVGRFQDAEALRASMKKKELIKNP---GISLLN 641
>gi|297723953|ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
gi|222631076|gb|EEE63208.1| hypothetical protein OsJ_18018 [Oryza sativa Japonica Group]
gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa Japonica Group]
Length = 620
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 258/434 (59%), Gaps = 21/434 (4%)
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
H H + KI + + H V +L+ +Y + AR VF+ + S D+VSW AM+ Y
Sbjct: 145 HLSPVAHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAY 204
Query: 323 TQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
+ G + ++ D K PN VT+A VL+A G+L +GR V G+E D
Sbjct: 205 GRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETD 264
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V +ALV MY KC IA+AR +F++ +KDV+AWN++I+G N
Sbjct: 265 SLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKK 324
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V PD +TL V+SAC+++GA+++GS L Y++ +GL + NVYVGTAL++ YAKCGD
Sbjct: 325 AGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYN-NVYVGTALVDMYAKCGDLD 383
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSAC 542
A VF MR KN +W+A+I G G G ++ F M NE+ ++P+++ F +LSAC
Sbjct: 384 KAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSAC 443
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
H G+V +G + F S+ +F+ +P ++HY CMVD LAR+G LEE +F+E +P + D +
Sbjct: 444 VHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDPLARSGHLEEVWDFIEKIPDKVDAVM 503
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
GA L C ++GE +I ++++L P + YV+ S +YAS GR ++R LM++
Sbjct: 504 LGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGLMRE 563
Query: 663 RGLSKSPGCSLVDL 676
RG++K+PGCS V++
Sbjct: 564 RGVNKTPGCSWVEI 577
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 211/423 (49%), Gaps = 30/423 (7%)
Query: 69 HALL-IVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HALL +D ++D L+++Y AR VF+ +P+ D S+ M++ Y +
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 128 KDIVEFYKCMRKRLKEHDNFV-FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLT 184
++ + M K N V + VL AC + D+ G V E K G DS V +
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVE-EWSKSAGMETDSLVGS 269
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LV MY KC +I +R+VFD +DK+VV+W +MI GY QN + E + LF+ M++ V
Sbjct: 270 ALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCP 329
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
++ITL +++AC+ + AL G L GY G+ N ++ TAL+DMY KCG++ A VF
Sbjct: 330 DKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVF 389
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNL 363
++ ++ SW A+I G +G D+A++ F + D P+ +T VLSA G +
Sbjct: 390 RKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLV 449
Query: 364 NMG-RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
G R +SL ++ +I + +A + ++ E W+ I +
Sbjct: 450 KDGKRWFNSL-----TSEFQIIPKIEHYSCMVDPLARSGHLEEV--------WD-FIEKI 495
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGS-------SLHAYSTKQGLLSSNVYVGTALLNF 475
D V DAV L ++++AC V++G L ++ ++SS +Y + L+
Sbjct: 496 PDKV--DAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDD 553
Query: 476 YAK 478
AK
Sbjct: 554 SAK 556
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 197/662 (29%), Positives = 326/662 (49%), Gaps = 36/662 (5%)
Query: 50 IPCLNLLGLCKSTGSLKA---FHALLI-VDGLTNDKC-NTKLVSMYGSFGHVKYARSVFD 104
+ C+ +L S G L FH + GL +D T +++MY G V +AR FD
Sbjct: 42 VSCIAILDAFASLGDLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVSHARRAFD 101
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
+M + S+ MI Y D +E + M + + F VL AC +R I
Sbjct: 102 AMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIAL 161
Query: 165 GMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G +H IV G G D + +V+MY KC ++ +R+VF+ KN V+W +MIA
Sbjct: 162 GKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACS 221
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
++D +E L M + N+ITL S++ ACA ++++ +G+ +H + G+E ++
Sbjct: 222 RHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNT 281
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ AL+++Y KCG +R AR + + + D +SWT ++ Y + G+ +A+ +
Sbjct: 282 VANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEG 341
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
+ T ++L + + L +G +H G+E D + ALVDMY KC AR
Sbjct: 342 VKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAAR 401
Query: 402 YIFETTSE-KDVIAWNSIISG--LDDN---------------VSPDAVTLVSVISACASL 443
F+ S+ +DV WN++++ L D V+PDAVT +S++ ACASL
Sbjct: 402 RAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASL 461
Query: 444 GAVQVGSSLHAYSTKQGL-----LSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE---K 495
A+ +G H+ ++GL ++S + T+++N YAKCG A+ F R
Sbjct: 462 AALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARAS 521
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
+ V WSAM+ Y G +L F M E V+P+ V F + ++ CSH+G+V E F
Sbjct: 522 DVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFF 581
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
S+ D P+ H+ C+VDLL+RAG + EA M P+ S + L C Y
Sbjct: 582 TSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMRRAPLGAHHSTWMTLLSACRTYGD 641
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
+ + ++ L A Y L+++++ +W V R+ + +RG PGCS ++
Sbjct: 642 LERARRVAARLASLRSGSA--YSLLASVFCLSRKWDDVRNARQSLVERGFITQPGCSWIE 699
Query: 676 LD 677
++
Sbjct: 700 IN 701
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 3/212 (1%)
Query: 424 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ V+PD V+ ++++ A ASLG + G H + L S+V V TA+L Y +CG
Sbjct: 35 EGVAPDRVSCIAILDAFASLGDLSQGEFFHRTVCEASGLGSDVVVATAVLTMYNRCGSVS 94
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
AR FDAM +N V+WSAMI Y +G G +L LF M +E V+ N + F ++L AC+
Sbjct: 95 HARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACA 154
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
+ G + D + +V++ + G ++ A E E M + V+ +
Sbjct: 155 SMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVT-W 213
Query: 604 GAFLHGCGLYSRFDLGEVMIKKM-LE-LHPDK 633
+ C + R+ ++ +M L+ L P+K
Sbjct: 214 NTMIAACSRHDRYKEAFALLGEMDLDGLRPNK 245
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 310/570 (54%), Gaps = 38/570 (6%)
Query: 141 LKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSR 200
K NFV S + AC E E + + T L+ Y + + +R
Sbjct: 12 FKPIPNFVRSSLRNACVESSQNTESPPYKPK------KHHILATNLIVSYFEKGLVEEAR 65
Query: 201 QVFDETLDKNVVSWTSMIAGYVQ---NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+FDE +++VV+WT+MI GY N CA E F+ M + N+ TL S++ +C
Sbjct: 66 SLFDEMPERDVVAWTAMITGYASSNYNSCAWE---CFHEMFKQGRSPNEFTLSSVLKSCR 122
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG-NIRDARSVFDELCSIDLVSWT 316
++ L G +HG ++K+G+E + ++ AL++MY C + A +F ++ + V+WT
Sbjct: 123 NMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKVKNDVTWT 182
Query: 317 AMIVGYTQSGYPDKALKLFTDK--KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+I G+T G LK++ + AD P +TIA + ASA + ++ G+ +H+ +
Sbjct: 183 TLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIA--VRASASIDSVTTGKQIHASVV 240
Query: 375 RLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS------ 427
+ G + + V+N+++D Y +C +++A+ F +KD+I WN++IS L+ + S
Sbjct: 241 KRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISELERSDSSEALLM 300
Query: 428 ----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
P+ T S+++ACA++ A+ G LH ++G + NV + AL++ YA
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGF-NKNVELANALIDMYA 359
Query: 478 KCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
KCGD + VF + E+ N V+W++M+ GYG G G ++ LF M++ ++P+ ++F
Sbjct: 360 KCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFM 419
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
+LSAC H G+V +G K F M ++ P Y C+VDLL RAG++ EA E +E MP
Sbjct: 420 AVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPF 479
Query: 597 EPDVSLFGAFLHGCGLYSRFDL-GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
+PD S +GA L C + L + KK++EL P YV++S +YA++G+W+ +
Sbjct: 480 KPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYVMLSYIYAAEGKWVEFAR 539
Query: 656 VRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
VR++M+ G K G S ++++ FSF+
Sbjct: 540 VRKMMRMMGNKKEAGMSWIEVE-NQVFSFA 568
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 220/448 (49%), Gaps = 29/448 (6%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
T L+ Y G V+ ARS+FD MP D ++ MI Y ++ E + M K+ +
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRS 108
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCR-DIGSSRQ 201
+ F S VLK+C ++ + G VH +VK+G S +V L++MYA C + ++
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFL 168
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT---LGSLVTACAK 258
+F + KN V+WT++I G+ GL ++ +M +E +T + V A A
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM---LLENADVTPYCITIAVRASAS 225
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ ++ GK +H ++K G + N ++ ++LD Y +CG + +A+ F E+ DL++W +
Sbjct: 226 IDSVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTL 285
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
I +S +AL +F + F PN T S+++A A + LN G+ +H R G
Sbjct: 286 ISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGF 344
Query: 379 -EDYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISG--------------- 421
++ + NAL+DMYAKC I D+ +F E +++++W S++ G
Sbjct: 345 NKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ + PD + ++V+SAC G V+ G + ++ + + +++ +
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 480 GDAQSARMVFDAMREK-NTVTWSAMIGG 506
G A + + M K + TW A++G
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGA 492
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 195/693 (28%), Positives = 338/693 (48%), Gaps = 76/693 (10%)
Query: 59 CKSTGSL---KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C ++GSL K HA + G D ++L+ +Y + G V A +FD +P+ + +
Sbjct: 20 CFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFW 79
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELR-DIDEGMKVHCEIV 173
+I L ++ + M D F+ VL+AC + ++H +I+
Sbjct: 80 NKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKII 139
Query: 174 KVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLV 232
G G V L+D+Y+K + ++ VF+ K+ VSW +MI+G QN E ++
Sbjct: 140 HHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAIL 199
Query: 233 LFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYV 292
LF +M + V S+++AC K+ G+ LHG+I+K G+ + + AL+ +Y
Sbjct: 200 LFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYS 259
Query: 293 KCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIAS 352
+ GN+ A +F ++ D +S+ ++I G Q G+ D+AL+LF + P+ VT+AS
Sbjct: 260 RWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVAS 319
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
+LSA A +G G+ +HS I++G+ D + +L+D+Y KC I A F TT ++
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379
Query: 412 VIAWNSIIS--GLDDNVS---------------PDAVTLVSVISACASLGAVQVGSSLHA 454
V+ WN ++ G N+S P+ T S++ C SLGA+ +G +H
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHT 439
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
K G NVYV + L++ YAK G+ +AR + +RE++ V+W+AMI GY
Sbjct: 440 QVIKSG-FQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFA 498
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK--------------------- 553
+L LF +M N+ ++ + + F++ +SAC+ + +G +
Sbjct: 499 EALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALA 558
Query: 554 -----CFYSMC-------RDFKFVPSMK------------------HYVCMVDLLARAGR 583
YS C R+F +P V + + + + G
Sbjct: 559 SNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGL 618
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
+ + F+ MPIEPD ++ L C ++ ++GE + +LEL P+ + YVL+SN+
Sbjct: 619 MPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNM 678
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
YA G+W ++ R++MK RG+ K PG S +++
Sbjct: 679 YAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEV 711
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 186/370 (50%), Gaps = 31/370 (8%)
Query: 50 IPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDS 105
+ +LL C S G+ K H+ +I G+++D L+ +Y ++ A F +
Sbjct: 315 VTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLT 374
Query: 106 MPNPDFYSFQVMIRWY-FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
+ + VM+ Y L +L + F + + L + + + +L+ C L +D
Sbjct: 375 TETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMP-NQYTYPSILRTCTSLGALDL 433
Query: 165 GMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G ++H +++K G + +V + L+DMYAK ++ ++R + +++VVSWT+MIAGY Q
Sbjct: 434 GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQ 493
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG--YI------LKI 275
+D E L LF M + + I S ++ACA ++AL+QG+ +H YI L I
Sbjct: 494 HDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSI 553
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G + S++ L+ +Y KCG+I DA+ F E+ ++VSW AMI GY+Q GY +A+ LF
Sbjct: 554 GNALASNV---LITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLF 610
Query: 336 TDKKWADFFPNHVTIA-------------SVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
+ K PNHVT ++LSA N+ +G + L ED
Sbjct: 611 EEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSA 670
Query: 383 VINALVDMYA 392
L +MYA
Sbjct: 671 TYVLLSNMYA 680
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 189/439 (43%), Gaps = 59/439 (13%)
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M E + N T L C +L K LH I K G + L + L+D+Y+ G
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ +A +FD++ S ++ W +I G + L LF+ + P+ T ASVL A
Sbjct: 61 VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120
Query: 357 -SAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIA 414
S + +H+ I G ++ N L+D+Y+K + A+ +FE KD ++
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180
Query: 415 WNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
W ++ISGL N V P SV+SAC + ++G LH +
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K G LSS +V AL+ Y++ G+ +A +F M ++ ++++++I G +G +L
Sbjct: 241 KWG-LSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRAL 299
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC----------------------- 554
LF M + ++P+ V ++LSAC+ VG G+K
Sbjct: 300 QLFEKMQLDCMKPDCVTVASLLSACAS---VGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356
Query: 555 -FYSMCRDFK-----FVPSMKHYVCMVDLLARA----GRLEEALEFMENMPIE---PDVS 601
Y C D + F+ + V + +++ A G L E+ M IE P+
Sbjct: 357 DLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQY 416
Query: 602 LFGAFLHGCGLYSRFDLGE 620
+ + L C DLGE
Sbjct: 417 TYPSILRTCTSLGALDLGE 435
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 206/675 (30%), Positives = 334/675 (49%), Gaps = 40/675 (5%)
Query: 37 LDQTFASFHSL--PSIPC-----LNLLGLCKS-----TGSLKAFHALLIVDGLTND-KCN 83
L++T ++ + +PC ++ LC S G A H +IV GL N
Sbjct: 126 LEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASH--VIVSGLQNQVSVA 183
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
L++M+G+ G V+ A +FD M D S MI Y + + MR
Sbjct: 184 NSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLR 243
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQV 202
D ++ C G +H ++ S V+ LV+MY+ + + +
Sbjct: 244 PDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFL 303
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F ++++SW +MI+ YVQN + + L ++ N +T S + AC+ AL
Sbjct: 304 FWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGAL 363
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
GK +H +L++ ++ N + +L+ MY KC ++ DA VF + + D+VS+ +I GY
Sbjct: 364 IDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGY 423
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL-NMGRMVHSLGIRLG-LED 380
KA+++F+ + A PN++T+ ++ + +L N GR +H+ IR G L D
Sbjct: 424 AVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSD 483
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------------LDDNV 426
V N+L+ MYAKC + + IF + + K++++WN+II+ +D
Sbjct: 484 EYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQH 543
Query: 427 SP---DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ D V L +S+CASL +++ G LH K GL S+ YV A ++ Y KCG
Sbjct: 544 AGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGL-DSDSYVVNAAMDMYGKCGKMN 602
Query: 484 SA-RMVFD-AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+MV D A+R + W+ +I GY G + F M+ +P+ V F +LSA
Sbjct: 603 EMLQMVPDQAIRPQQC--WNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSA 660
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH G+V +G + SM F P +KH VC+VDLL R GR EA F+E MP+ P+
Sbjct: 661 CSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDL 720
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++ + L + ++G KK+LEL P YVL+SNLYA++ RW+ V+++R MK
Sbjct: 721 IWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMK 780
Query: 662 QRGLSKSPGCSLVDL 676
++K P CS + L
Sbjct: 781 TININKRPACSWLKL 795
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 286/600 (47%), Gaps = 30/600 (5%)
Query: 67 AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
A HAL GL N T L+ +YGS G V AR +F MP + S+ ++ N
Sbjct: 65 AIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNG 124
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLT 184
++ + Y+ MR+ + F+ V+ C L + G++V ++ G + V
Sbjct: 125 YLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVAN 184
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ M+ + + ++FD + + +S +MI+ Y + ++F+ MR +
Sbjct: 185 SLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRP 244
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ TL SL++ CA G +H L+ ++ + ++ AL++MY G + DA +F
Sbjct: 245 DATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ DL+SW MI Y Q+ ALK + PNH+T +S L A + G L
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALI 364
Query: 365 MGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-- 421
G+MVH++ ++L L+ + V N+L+ MY KC+ + DA +F++ DV+++N +I G
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYA 424
Query: 422 -LDD--------------NVSPDAVTLVSVISACASLGAVQ-VGSSLHAYSTKQGLLSSN 465
L+D + P+ +T++++ + S + G LHAY + G LS
Sbjct: 425 VLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDE 484
Query: 466 VYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
YV +L+ YAKCG+ +S+ +F+++ KN V+W+A+I G G +L LF DM +
Sbjct: 485 -YVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQH 543
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV--CMVDLLARAGR 583
+ + V LS+C+ + EG + + + K YV +D+ + G+
Sbjct: 544 AGNKLDRVCLAECLSSCASLASLEEGMQ-LHGL--GMKSGLDSDSYVVNAAMDMYGKCGK 600
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL--HPDKACYYVLVS 641
+ E L+ + + I P + + G Y F E K+M+ + PD + L+S
Sbjct: 601 MNEMLQMVPDQAIRPQ-QCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLS 659
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 215/430 (50%), Gaps = 25/430 (5%)
Query: 132 EFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK----VHCEIVKVG-GPDSFVLTGL 186
E + MR+R F + ++ AC E R DEG+ +H + G + ++ T L
Sbjct: 27 ELLRGMRERGVPLSGFALASLVTAC-ERRGRDEGIACGAAIHALTHRAGLMGNVYIGTAL 85
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ +Y + +R++F E ++NVVSWT+++ N +E L + +MR V N
Sbjct: 86 LHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETLRAYRQMRREGVPCNA 145
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
++V+ C L G + +++ G++ + +L+ M+ G ++DA +FD
Sbjct: 146 NAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMFGNLGRVQDAEKLFDR 205
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D +S AMI Y+ G K +F+D + P+ T+ S++S A + + G
Sbjct: 206 MEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHG 265
Query: 367 RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
+HSL +R L+ TVINALV+MY+ ++DA ++F S +D+I+WN++IS N
Sbjct: 266 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQN 325
Query: 426 VS-----------------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ P+ +T S + AC+S GA+ G +HA Q L N+ V
Sbjct: 326 CNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAI-VLQLSLQRNLLV 384
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
G +L+ Y KC + A VF +M + V+++ +IGGY + DG ++ +FS + + +
Sbjct: 385 GNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGI 444
Query: 529 QPNEVIFTTI 538
+PN + I
Sbjct: 445 KPNYITMINI 454
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 194/415 (46%), Gaps = 23/415 (5%)
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL---RALHQ 264
D+ +W + ++G V+ L MRE V + L SLVTAC + +
Sbjct: 3 DRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G +H + G+ N ++ TALL +Y G + DAR +F E+ ++VSWTA++V +
Sbjct: 63 GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSS 122
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TV 383
+GY ++ L+ + + N A+V+S L N G V S I GL++ +V
Sbjct: 123 NGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSV 182
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GL------------DDNV 426
N+L+ M+ + DA +F+ E D I+ N++IS G+ +
Sbjct: 183 ANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGL 242
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PDA TL S++S CAS GS +H+ + L SS V V AL+N Y+ G A
Sbjct: 243 RPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSS-VTVINALVNMYSAAGKLSDAE 301
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F M ++ ++W+ MI Y + +L + + PN + F++ L ACS G
Sbjct: 302 FLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPG 361
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
+ +G K +++ ++ ++ + + +E+A + ++MP VS
Sbjct: 362 ALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVS 415
>gi|125551786|gb|EAY97495.1| hypothetical protein OsI_19422 [Oryza sativa Indica Group]
Length = 620
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 258/434 (59%), Gaps = 21/434 (4%)
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
H H + KI + + H V +L+ +Y + AR VF+ + S D+VSW AM+ Y
Sbjct: 145 HLSPVAHALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAY 204
Query: 323 TQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
+ G + ++ D K PN VT+A VL+A G+L +GR V G+E D
Sbjct: 205 GRVGMNGEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVEEWSKSAGMETD 264
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V +ALV MY KC IA+AR +F++ +KDV+AWN++I+G N
Sbjct: 265 SLVGSALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKK 324
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
V PD +TL V+SAC+++GA+++GS L Y++ +GL + NVYVGTAL++ YAKCGD
Sbjct: 325 AGVCPDKITLAGVLSACSAVGALELGSELDGYASCRGLYN-NVYVGTALVDMYAKCGDLD 383
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSAC 542
A VF MR KN +W+A+I G G G ++ F M NE+ ++P+++ F +LSAC
Sbjct: 384 KAIEVFRKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSAC 443
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
H G+V +G + F S+ +F+ +P ++HY CMVDLLAR+G LEE +F+E +P + D +
Sbjct: 444 VHAGLVKDGKRWFNSLTSEFQIIPKIEHYSCMVDLLARSGHLEEVWDFIEKIPDKVDAVM 503
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
GA L C ++GE +I ++++L P + YV+ S +YAS GR ++R M++
Sbjct: 504 LGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDDSAKMRGPMRE 563
Query: 663 RGLSKSPGCSLVDL 676
RG++K+PGCS V++
Sbjct: 564 RGVNKTPGCSWVEI 577
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/423 (30%), Positives = 212/423 (50%), Gaps = 30/423 (7%)
Query: 69 HALL-IVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HALL +D ++D L+++Y AR VF+ +P+ D S+ M++ Y +
Sbjct: 151 HALLEKIDLNSHDHTVHSLITIYSYLDDPGAARKVFNGIPSRDVVSWNAMMKAYGRVGMN 210
Query: 128 KDIVEFYKCMRKRLKEHDNFV-FSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLT 184
++ + M K N V + VL AC + D+ G V E K G DS V +
Sbjct: 211 GEVGRMLRDMVKDGAVVPNAVTLAVVLAACRDEGDLVLGRWVE-EWSKSAGMETDSLVGS 269
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LV MY KC +I +R+VFD +DK+VV+W +MI GY QN + E + LF+ M++ V
Sbjct: 270 ALVGMYEKCGEIAEARRVFDSIIDKDVVAWNAMITGYAQNGMSNEAISLFHNMKKAGVCP 329
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
++ITL +++AC+ + AL G L GY G+ N ++ TAL+DMY KCG++ A VF
Sbjct: 330 DKITLAGVLSACSAVGALELGSELDGYASCRGLYNNVYVGTALVDMYAKCGDLDKAIEVF 389
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF-PNHVTIASVLSASAQLGNL 363
++ ++ SW A+I G +G D+A++ F + D P+ +T VLSA G +
Sbjct: 390 RKMRCKNVASWNALICGLAFNGQGDEAIQHFELMRNEDGLKPDDITFIGVLSACVHAGLV 449
Query: 364 NMG-RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
G R +SL ++ +I + ++A + ++ E W+ I +
Sbjct: 450 KDGKRWFNSL-----TSEFQIIPKIEHYSCMVDLLARSGHLEEV--------WD-FIEKI 495
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGS-------SLHAYSTKQGLLSSNVYVGTALLNF 475
D V DAV L ++++AC V++G L ++ ++SS +Y + L+
Sbjct: 496 PDKV--DAVMLGALLAACRKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSGRLDD 553
Query: 476 YAK 478
AK
Sbjct: 554 SAK 556
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 191/638 (29%), Positives = 328/638 (51%), Gaps = 35/638 (5%)
Query: 69 HALLIVDGLTNDKCNTKLVSMYG--SFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
HA L+ G +L++ Y S + AR VFD +P D S+ ++ + +
Sbjct: 14 HASLLKSGFAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHAASGA 73
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
+ + + M + + F L++ R G ++ +K G + F +
Sbjct: 74 HPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASA 133
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEG 244
L+D+YAKC + +RQVFD ++N VSW ++IAGY ++ L LF M REG V
Sbjct: 134 LLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLVP- 192
Query: 245 NQITLGSLVTACAKLRA--LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
++ T SL+TA +HQ LHG I+K G + ++ A + Y +CG+++D+R
Sbjct: 193 DEATFASLLTAVEGPSCFLMHQ---LHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRR 249
Query: 303 VFDELCSI-DLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQL 360
+FD + I DL+SW AM+ YT +G D+A+K F + + P+ + S++S+ ++
Sbjct: 250 IFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEH 309
Query: 361 GNLN-MGRMVHSLGIRLGLEDYT-VINALVDMYAKCH---VIADARYIFETTSEKDVIAW 415
G+ + GR++H L I+ LE T V NAL+ MY + + ++ DA F + KD ++W
Sbjct: 310 GHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSW 369
Query: 416 NSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
NS+++G +NV D + + + + L +Q+G +H
Sbjct: 370 NSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIH 429
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G +SN +V ++L+ Y+K G AR F+ + ++V W+AMI GY G
Sbjct: 430 SGF-ASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQHGQAENVDI 488
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF++ML + + + F ++++CSH G+V EG + +M + M+HY C VDL
Sbjct: 489 LFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRMEHYACGVDLY 548
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
RAG+L++A + +++MP EPD ++ L C ++ +L + + P + YV
Sbjct: 549 GRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFVAEPRQHSTYV 608
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L+S++Y+ G W V+ +MK+RGLSK PG SL+++
Sbjct: 609 LLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLIEV 646
>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 840
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 287/520 (55%), Gaps = 53/520 (10%)
Query: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAK 258
+R VF + + ++T+ I ++Q Q L FN E + +++ C
Sbjct: 207 TRHVFPSN-SRTLSTFTTHI--HLQQPLLQMALHGFNMKFENY--------NAILNECVN 255
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
RA +G+ +H +++K + L T L+ +Y KC ++ DA +VFDE+ ++VSWTAM
Sbjct: 256 KRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAM 315
Query: 319 IVGYTQSGYPDKALKLF---------------------TDKKWADFFPNHVTIASVLSAS 357
I Y+Q GY +AL LF ++ W PN T A+VL++
Sbjct: 316 ISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSC 375
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+GR +HSL I+L ED+ + ++L+DMYAK I +AR +FE E+DV++
Sbjct: 376 TSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCT 435
Query: 417 SIISG-----LDDN------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
+IISG LD+ + + VT V++A + L A+ +G +H + +
Sbjct: 436 AIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRS 495
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
+ S V + +L++ Y+KCG+ +R +FD M E+ ++W+AM+ GY G+G L L
Sbjct: 496 EI-PSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKL 554
Query: 520 FSDMLNE-EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR-DFKFVPSMKHYVCMVDL 577
F+ M E +V+P+ V +LS CSH G+ +G F M + P M+HY C+VDL
Sbjct: 555 FTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDL 614
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYY 637
L R+GR+EEA EF++ MP EP +++G+ L C ++S D+GE +++LE+ P A Y
Sbjct: 615 LGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNY 674
Query: 638 VLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
V++SNLYAS GRW V+ +R+LM ++ ++K PG S ++LD
Sbjct: 675 VILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELD 714
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 179/337 (53%), Gaps = 41/337 (12%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
++ +L C R EG +VH ++K P F+ T L+ +Y KC +G + VFDE
Sbjct: 246 YNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP 305
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLF--------------------NRMREGF-VEGNQ 246
++NVVSWT+MI+ Y Q A + L LF N R E N+
Sbjct: 306 ERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNE 365
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
T +++T+C G+ +H I+K+ E + + ++LLDMY K G I +AR+VF+
Sbjct: 366 FTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFEC 425
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
L D+VS TA+I GY Q G ++AL+LF + N+VT VL+A + L L++G
Sbjct: 426 LPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLG 485
Query: 367 RMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--- 422
+ VH+ +R + + V+ N+L+DMY+KC + +R IF+T E+ VI+WN+++ G
Sbjct: 486 KQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKH 545
Query: 423 ---------------DDNVSPDAVTLVSVISACASLG 444
+ V PD+VT+++V+S C+ G
Sbjct: 546 GEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGG 582
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 181/366 (49%), Gaps = 33/366 (9%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY------------FLNDLYKDIV 131
T+L+ +Y + A +VFD MP + S+ MI Y F D+ +
Sbjct: 282 TRLIVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLT 341
Query: 132 EFYKCMRKRLK---------EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
Y + +L E + F F+ VL +C G ++H I+K+ D F
Sbjct: 342 GVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVF 401
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L+DMYAK I +R VF+ +++VVS T++I+GY Q +E L LF R++
Sbjct: 402 VGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEG 461
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
++ N +T ++TA + L AL GK +H ++L+ I L +L+DMY KCGN+ +R
Sbjct: 462 MKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSR 521
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNHVTIASVLSASAQL 360
+FD + ++SW AM+VGY++ G + LKLFT ++ P+ VTI +VLS +
Sbjct: 522 RIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHG 581
Query: 361 GNLNMGRMVHS------LGIRLGLEDYTVINALVDMYAKCHVIADA-RYIFETTSEKDVI 413
G + G + + + + +E Y + VD+ + + +A +I + E
Sbjct: 582 GLEDKGLNIFNDMSSGKIEVEPKMEHYGCV---VDLLGRSGRVEEAFEFIKKMPFEPTAA 638
Query: 414 AWNSII 419
W S++
Sbjct: 639 IWGSLL 644
>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
Length = 830
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 206/721 (28%), Positives = 344/721 (47%), Gaps = 100/721 (13%)
Query: 66 KAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
K HA ++ +G N+ TKLV Y ++ A+ +F + + +S+ +I
Sbjct: 90 KQIHARILKNGDFYAGNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKC 149
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
L + + + M + DNFV V KAC L+ G VH +VK G D F
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVF 209
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L DMY KC + +R+VFDE ++NVV+W +++ GYVQN +E + L + MR+
Sbjct: 210 VASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDG 269
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
VE +++T+ + ++A A + + +GK H + G+E+++ L T+LL+ Y K G I A
Sbjct: 270 VEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYAE 329
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+FD + D+V+W +I GY Q G + A+ + + + + VT+++++SA+A+
Sbjct: 330 MIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTK 389
Query: 362 NLNMGRMVHSLGIRLGLE--------------------------------DYTVINALVD 389
NL G+ V IR LE D + N L+
Sbjct: 390 NLKFGKEVQCYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLA 449
Query: 390 MYAKCHVIADA-RYIFETTSEK---DVIAWNSIISGL----------------------- 422
YA+ + +A R +E E +VI WN II L
Sbjct: 450 AYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSSGISP 509
Query: 423 -----------------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
D + P+A ++ +SA A+L ++ G S+H
Sbjct: 510 NLISWTTMMNGMVQNGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIH 569
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
Y + SS+V + T+L++ YAKCGD A VF + ++AMI Y + G+
Sbjct: 570 GYIVRNLQHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNV 629
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
++ L+ + + +P+ + FT++LSAC+H G + + + F M P ++HY
Sbjct: 630 KEAITLYRSLEDMGNKPDNITFTSLLSACNHVGDINQAIEIFTDMVSKHGVKPCLEHYGL 689
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
MVDLLA AG + AL+ +E MP +PD + + + C + +L E + +LE P+
Sbjct: 690 MVDLLASAGETDRALKLIEEMPYKPDARMIQSLVASCNKQHKSELVEYFSRHLLESEPEN 749
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD--------IANDFSFS 685
+ YV +SN YA +G W V ++R++MK +GL+K+PGCS + + +AND +
Sbjct: 750 SGNYVTISNAYAVEGSWDEVVKMRDMMKAKGLTKNPGCSWIQIKGEEGVHVFVANDKTHI 809
Query: 686 R 686
R
Sbjct: 810 R 810
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 142/468 (30%), Positives = 251/468 (53%), Gaps = 23/468 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C RD+ G ++H I+K G + ++ T LV YAKC + ++ +F
Sbjct: 72 IYGEILQGCVYERDLCTGKQIHARILKNGDFYAGNEYIETKLVIFYAKCDALEIAQVLFS 131
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NV SW ++I + + L+ F M E + + + ++ AC L+
Sbjct: 132 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRF 191
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY++K G+E + ++L DMY KCG + DAR VFDE+ ++V+W A++VGY Q
Sbjct: 192 GRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGYVQ 251
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G ++A++L +D + P+ VT+++ LSASA +G + G+ H++ I GLE D +
Sbjct: 252 NGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNIL 311
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDD-----------NV 426
+L++ Y K +I A IF+ +KDV+ WN +ISG ++D N+
Sbjct: 312 GTSLLNFYCKVGLIEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENL 371
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VTL +++SA A ++ G + Y + L S++ + + ++ YAKCG A+
Sbjct: 372 KYDCVTLSTLMSAAARTKNLKFGKEVQCYCIRHS-LESDIVLASITMDMYAKCGSIVDAK 430
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD+ EK+ + W+ ++ Y G G +L LF +M E V PN + + I+ + G
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 490
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
V E + F M + P++ + M++ + + G EEA+ F+ M
Sbjct: 491 EVNEAKEMFLQM-QSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
>gi|297830768|ref|XP_002883266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329106|gb|EFH59525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 564
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 297/550 (54%), Gaps = 23/550 (4%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDET 206
++ K LK C + + +H V G + L L+D+Y K D+ +R++FD
Sbjct: 14 LYLKALKLCSYQNVKKQLLLIHGNSVTNGFGSNLQLNDMLIDLYLKQGDVKHARKLFDRI 73
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
++VVSWT+MI+ + + ++ L+LF +M V NQ T GS++ +C L L +G
Sbjct: 74 PKRDVVSWTAMISRFSRCGYHRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGM 133
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+ G + K N + +ALL +Y +CG + DAR FD + DLVSW +MI GYT +
Sbjct: 134 QIQGCLEKGKCAGNLIVRSALLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDGYTTNA 193
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVIN 385
D + LF P+ T S+L AS + L +H L I+LG +I
Sbjct: 194 CVDTSFSLFQLMFAEGKKPDCFTFGSLLRASIVVKCLEPVGQLHGLAIKLGFGRSSALIR 253
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-DDNVSP---------------- 428
+LVD Y KC IA+A + E T+++D+I+ ++I+G N+
Sbjct: 254 SLVDAYVKCGSIANAWKLHEDTTKRDLISCTALITGFAQQNICTSDAFDIFNEMILMKTK 313
Query: 429 -DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
D V + S++ C ++ +V VG +H ++ K + ++ +G +L++ YAK GD + A +
Sbjct: 314 MDEVVVSSMLKICTTIASVTVGRQIHGFALKSSQIRFDIALGNSLIDMYAKSGDIEDAVL 373
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
F+ M+EK+ +W+++I GYG G+ ++ L++ M +E ++PN+V F ++LSACSHTG
Sbjct: 374 AFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHEGIKPNDVTFLSLLSACSHTGQ 433
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP--IEPDVSLFGA 605
GWK F M +H+ C++D+LAR+G LEEA E + + I S +GA
Sbjct: 434 TELGWKIFNKMINKHGIKAREEHFSCIIDMLARSGYLEEAYELIRSKDGIISLSSSTWGA 493
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG- 664
FL C + L +V ++L + P K Y+ +++++A++G W + R+LMK+ G
Sbjct: 494 FLDACRRHGNVQLSKVAASQLLSVEPKKPVNYINLASVHAANGAWDSALKTRQLMKESGS 553
Query: 665 LSKSPGCSLV 674
+K+PG SLV
Sbjct: 554 CNKTPGYSLV 563
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 245/500 (49%), Gaps = 43/500 (8%)
Query: 68 FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H + +G +N + N L+ +Y G VK+AR +FD +P D S+ MI +
Sbjct: 34 IHGNSVTNGFGSNLQLNDMLIDLYLKQGDVKHARKLFDRIPKRDVVSWTAMISRFSRCGY 93
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH--CEIVKVGGPDSFVLT 184
++D + +K M ++ + F + VLK+C +L + EGM++ E K G + V +
Sbjct: 94 HRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGMQIQGCLEKGKCAG-NLIVRS 152
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ +YA+C + +R FD ++++VSW SMI GY N C LF M F EG
Sbjct: 153 ALLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDGYTTNACVDTSFSLFQLM---FAEG 209
Query: 245 NQ---ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ T GSL+ A ++ L LHG +K+G +S L+ +L+D YVKCG+I +A
Sbjct: 210 KKPDCFTFGSLLRASIVVKCLEPVGQLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAW 269
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGY-PDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
+ ++ DL+S TA+I G+ Q A +F + + V ++S+L +
Sbjct: 270 KLHEDTTKRDLISCTALITGFAQQNICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTI 329
Query: 361 GNLNMGRMVHSLGIRLGLEDYTVI--NALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
++ +GR +H ++ + + N+L+DMYAK I DA FE EKDV +W S+
Sbjct: 330 ASVTVGRQIHGFALKSSQIRFDIALGNSLIDMYAKSGDIEDAVLAFEEMKEKDVRSWTSL 389
Query: 419 ISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSL-HAYSTKQG 460
I+G + + P+ VT +S++SAC+ G ++G + + K G
Sbjct: 390 IAGYGRHGNFEKAIDLYNRMEHEGIKPNDVTFLSLLSACSHTGQTELGWKIFNKMINKHG 449
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV------TWSAMIGGYGMQGDGG 514
+ + + + +++ A+ G + A ++ +R K+ + TW A + G+
Sbjct: 450 IKAREEHF-SCIIDMLARSGYLEEA---YELIRSKDGIISLSSSTWGAFLDACRRHGNVQ 505
Query: 515 GSLALFSDMLNEEVQPNEVI 534
S S +L+ V+P + +
Sbjct: 506 LSKVAASQLLS--VEPKKPV 523
>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g55740, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 830
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/653 (29%), Positives = 328/653 (50%), Gaps = 43/653 (6%)
Query: 58 LCKSTGSLK------AFHALLIVDGLTNDKC---NTKLVSMYGSFGHVKYARSVFDSMPN 108
+CK+ G+LK H ++ GL + C + L MYG G + A VFD +P+
Sbjct: 179 VCKACGALKWSRFGRGVHGYVVKSGL--EDCVFVASSLADMYGKCGVLDDASKVFDEIPD 236
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ ++ ++ Y N ++ + + MRK+ E S L A + ++EG +
Sbjct: 237 RNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQS 296
Query: 169 HC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H IV D+ + T L++ Y K I + VFD +K+VV+W +I+GYVQ
Sbjct: 297 HAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLV 356
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
++ + + MR ++ + +TL +L++A A+ L GK + Y ++ E + L + +
Sbjct: 357 EDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTV 416
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY KCG+I DA+ VFD DL+ W ++ Y +SG +AL+LF + PN
Sbjct: 417 MDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNV 476
Query: 348 VTIASVLSASAQLGNLNMGR----MVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARY 402
+T ++ + + G ++ + + S GI L +T ++N +V I R
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRK 536
Query: 403 IFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+ E SGL P+A ++ +SACA L ++ +G ++H Y +
Sbjct: 537 MQE--------------SGL----RPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH 578
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
SS V + T+L++ YAKCGD A VF + +AMI Y + G+ ++AL+
Sbjct: 579 SSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
+ ++P+ + T +LSAC+H G + + + F + P ++HY MVDLLA AG
Sbjct: 639 LEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAG 698
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
E+AL +E MP +PD + + + C + +L + + +K+LE P+ + YV +SN
Sbjct: 699 ETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISN 758
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD--------IANDFSFSRV 687
YA +G W V ++RE+MK +GL K PGCS + + +AND + +R+
Sbjct: 759 AYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRI 811
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 256/499 (51%), Gaps = 26/499 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C RD+ G ++H I+K G + ++ T LV YAKC + + +F
Sbjct: 72 IYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFS 131
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NV SW ++I + + L+ F M E + + + ++ AC L+
Sbjct: 132 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRF 191
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY++K G+E + ++L DMY KCG + DA VFDE+ + V+W A++VGY Q
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G ++A++LF+D + P VT+++ LSASA +G + G+ H++ I G+E D +
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNIL 311
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDDNV----------- 426
+L++ Y K +I A +F+ EKDV+ WN IISG ++D +
Sbjct: 312 GTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKL 371
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VTL +++SA A +++G + Y + S++ + + +++ YAKCG A+
Sbjct: 372 KYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS-FESDIVLASTVMDMYAKCGSIVDAK 430
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD+ EK+ + W+ ++ Y G G +L LF M E V PN + + I+ + G
Sbjct: 431 KVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNG 490
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLF 603
V E F M + +P++ + M++ + + G EEA+ F+ M + P+
Sbjct: 491 QVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 549
Query: 604 GAFLHGCGLYSRFDLGEVM 622
L C + +G +
Sbjct: 550 TVALSACAHLASLHIGRTI 568
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 166/611 (27%), Positives = 291/611 (47%), Gaps = 39/611 (6%)
Query: 61 STGSLKAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
STG K HA ++ +G N+ TKLV Y ++ A +F + + +S+ +
Sbjct: 87 STG--KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAI 144
Query: 118 IRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG 177
I L + + + M + DNFV V KAC L+ G VH +VK G
Sbjct: 145 IGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL 204
Query: 178 PDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D FV + L DMY KC + + +VFDE D+N V+W +++ GYVQN +E + LF+
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
MR+ VE ++T+ + ++A A + + +GK H + G+E+++ L T+LL+ Y K G
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
I A VFD + D+V+W +I GY Q G + A+ + + + VT+A+++SA
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+A+ NL +G+ V IR E D + + ++DMYAKC I DA+ +F++T EKD+I W
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 416 NSIISGL-DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
N++++ + +S +A+ L Y + + NV ++
Sbjct: 445 NTLLAAYAESGLSGEALRLF--------------------YGMQLEGVPPNVITWNLIIL 484
Query: 475 FYAKCGDAQSARMVFDAMREK----NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
+ G A+ +F M+ N ++W+ M+ G G ++ M ++P
Sbjct: 485 SLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
N T LSAC+H + G + R+ + + +VD+ A+ G + +A E
Sbjct: 545 NAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA-EK 603
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKM--LELHPDKACYYVLVSNLYASDG 648
+ + ++ L A + LY + + + + L PD + ++N+ ++
Sbjct: 604 VFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDN----ITITNVLSACN 659
Query: 649 RWIRVNQVREL 659
+NQ E+
Sbjct: 660 HAGDINQAIEI 670
>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 202/681 (29%), Positives = 354/681 (51%), Gaps = 32/681 (4%)
Query: 25 SYT-NQQTPTQ--HELDQTFASFHSLPSIPCLNLLGLCKSTGSL--KAFHALLIVDGL-T 78
SY+ N Q Q HE+ + A +P ++L C +T A H LI G +
Sbjct: 23 SYSGNWQEALQLYHEIRISGAQLSDTWVLP--SILKACSNTSFNLGTAMHGCLIKQGCQS 80
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCM 137
+ + Y +G + A+ FDS N D S+ VM+ F N + + F K
Sbjct: 81 STSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGR 140
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDI 196
+ + + + V++A EL+ +G H I + G V L+ +YA+
Sbjct: 141 FAHFQPNISSLL-LVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMY 199
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTA 255
+ + + ++ +VVSW+ MI G+VQ ++G ++F N + E + + +T+ S++ A
Sbjct: 200 FAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKA 259
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C L+ + G +HG ++ G+E + + +L+DMY KC N+ A F E+ +++SW
Sbjct: 260 CTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISW 319
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
M+ Y + +AL L + VT+A+VL + + R VH + IR
Sbjct: 320 NLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIR 379
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
G E + ++N+++D YAKC+++ AR +F+ ++KDV+AW+++I+G
Sbjct: 380 KGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISV 439
Query: 422 ---LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+++ V P+ V++++++ ACA ++ H + ++GL +S V +GT++++ Y+K
Sbjct: 440 FKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGL-ASEVAIGTSIIDMYSK 498
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CGD +++ F+ + +KN V WSAMI + + G +L LF + +PN V ++
Sbjct: 499 CGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSL 558
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP--I 596
LSACSH G++ EG F SM + P ++HY C+VD+L+RAG+ EALE +E +P +
Sbjct: 559 LSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEM 618
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
E S++G L C Y LG ++L+L P + Y+L SNLYA+ G I ++
Sbjct: 619 EAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKM 678
Query: 657 RELMKQRGLSKSPGCSLVDLD 677
R L K++G+ G SLV ++
Sbjct: 679 RRLAKEKGVKVVAGYSLVHIN 699
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/445 (36%), Positives = 252/445 (56%), Gaps = 20/445 (4%)
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
SL+ +C +A+ GK LH + G ++ + T L+++Y C ++ AR +FD +
Sbjct: 79 ASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPK 138
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
++ W +I GY +G + A++L+ P++ T VL A A L + GR +
Sbjct: 139 HNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREI 198
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSP 428
H ++ G E D V AL+DMYAKC + AR +F+ +D + WNS+++ N P
Sbjct: 199 HEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHP 258
Query: 429 DA-----------------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
DA TLV+ ISA A A+ G LH S +Q S + V TA
Sbjct: 259 DACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHD-KVKTA 317
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ YAKCG + AR +F+ + K V+W+AMI GY M G +L LF +M N +P+
Sbjct: 318 LVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEM-NRVAKPD 376
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
+ F +LSACSH G++ EGW F +M RD+K P+++HY CMVDLL +GRL+EA +
Sbjct: 377 HITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLI 436
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
M + PD ++GA L+ C +++ +LGE+ +++++EL PD A YV++SN+YA G+W
Sbjct: 437 MQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIYAQAGKWE 496
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDL 676
V ++R+LM R L KS CS +++
Sbjct: 497 GVAKLRKLMTDRRLKKSIACSWIEV 521
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 171/320 (53%), Gaps = 7/320 (2%)
Query: 66 KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA + + G D TKLV++Y + AR +FD +P + + + V+IR Y N
Sbjct: 95 KQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLWNVLIRGYAWN 154
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
Y+ V+ Y M DNF F VLKAC L I+ G ++H +V+ G D FV
Sbjct: 155 GPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFVG 214
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
L+DMYAKC +GS+R+VFD+ L ++ V W SM+A Y QN L L + M +
Sbjct: 215 AALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTGLR 274
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ TL + ++A A AL QG+ LHG + E + + TAL+DMY KCG++R AR++
Sbjct: 275 PTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAKCGSVRVARNL 334
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+ L +VSW AMI GY G+ +AL LF + P+H+T VLSA + G L
Sbjct: 335 FERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACSHGGLL 393
Query: 364 NMGRMVHSLGIRLGLEDYTV 383
G M IR DY +
Sbjct: 394 EEGWMFFETMIR----DYKI 409
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 102/319 (31%), Positives = 169/319 (52%), Gaps = 18/319 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
++ +L++C + I G ++H ++ G G D+ + T LV++Y C + S+R +FD
Sbjct: 78 YASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIP 137
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
N+ W +I GY N + + L+ +M + + + T ++ ACA L A+ G+
Sbjct: 138 KHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGRE 197
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H ++++ G E + + AL+DMY KCG + AR VFD++ D V W +M+ Y+Q+G+
Sbjct: 198 IHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGH 257
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINA 386
PD L L ++ P T+ + +SASA L GR +H L R E + V A
Sbjct: 258 PDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTA 317
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------LDDNVSPDA 430
LVDMYAKC + AR +FE K V++WN++I+G ++ PD
Sbjct: 318 LVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVAKPDH 377
Query: 431 VTLVSVISACASLGAVQVG 449
+T V V+SAC+ G ++ G
Sbjct: 378 ITFVGVLSACSHGGLLEEG 396
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 194/617 (31%), Positives = 307/617 (49%), Gaps = 27/617 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
L++ Y + A VFD MP+ D S+ +I + + + MR+
Sbjct: 32 NNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRSTHA 91
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D+ F +LK + + G ++H ++KVG + F + L+DMYAKC + V
Sbjct: 92 FDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVV 151
Query: 203 FDETLDKNVVSWTSMIAGYVQ-NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
F ++N VSW +++A Y + DC VL EG VE + T+ L+T
Sbjct: 152 FQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEG-VEIDDGTVSPLLTLLDNAMF 210
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE--LCSIDLVSWTAMI 319
LH I+K G+E+ + + A + Y +C +++DA VFD LC DLV+W +M+
Sbjct: 211 YKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERVFDGAVLCR-DLVTWNSML 269
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
Y D A K+F D + F P+ T ++ A + + G+ +H L I+ GL+
Sbjct: 270 GAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLD 329
Query: 380 DYT-VINALVDMYAKCH--VIADARYIFETTSEKDVIAWNSIISG-LDDNVSPDAV---- 431
+ V NAL+ MY + + + DA IF + KD WNSI++G + +S DA+
Sbjct: 330 NSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFL 389
Query: 432 ------------TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
T +VI +C+ L +Q+G H + K G +N YVG++L+ Y+KC
Sbjct: 390 QMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQFHVLALKVGF-DTNSYVGSSLIFMYSKC 448
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTIL 539
G + AR F+A + N + W+++I GY G G +L LF M +V+ + + F +L
Sbjct: 449 GIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQGNIALDLFYMMKERKVKLDHITFVAVL 508
Query: 540 SACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD 599
+ACSH G+V EG SM DF P +HY C +DL RAG L++A +E MP EPD
Sbjct: 509 TACSHNGLVEEGCNFIESMESDFGIPPRQEHYACAIDLYGRAGHLKKATALVETMPFEPD 568
Query: 600 VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
+ L C +L + K +LEL P++ C YV++S +Y W V +
Sbjct: 569 AMVLKTLLGACRFCGDIELASQIAKILLELEPEEHCTYVILSEMYGRFKMWGEKASVTRM 628
Query: 660 MKQRGLSKSPGCSLVDL 676
M++RG+ K PG S +++
Sbjct: 629 MRERGVKKVPGWSWIEV 645
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 217/472 (45%), Gaps = 28/472 (5%)
Query: 166 MKVHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+ HC +K+G D + L+ YAKC ++ S+ QVFDE ++ VSW ++I+ + +
Sbjct: 13 IATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASS 72
Query: 225 DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
L MR + T GS++ A + L G+ LH +LK+G+ N
Sbjct: 73 GDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYVGKLKLGQQLHSVMLKVGLSENVFSG 132
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+ALLDMY KCG + D VF + + VSW ++ Y++ G D A + + +
Sbjct: 133 SALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLVASYSRVGDCDMAFWVLSCMELEGVE 192
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCHVIADARYI 403
+ T++ +L+ + +H ++ GLE + TV NA + Y++C + DA +
Sbjct: 193 IDDGTVSPLLTLLDNAMFYKLTMQLHCKIVKHGLELFNTVCNATITAYSECCSLQDAERV 252
Query: 404 FETTSE-KDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGA 445
F+ +D++ WNS++ + PDA T ++ AC+
Sbjct: 253 FDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFEPDAYTYTGIVGACSVQEH 312
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD--AQSARMVFDAMREKNTVTWSAM 503
G LH K+G L ++V V AL++ Y + D + A +F +M K+ TW+++
Sbjct: 313 KTCGKCLHGLVIKRG-LDNSVPVSNALISMYIRFNDRCMEDALRIFFSMDLKDCCTWNSI 371
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
+ GY G +L LF M ++ + F+ ++ +CS + G + F+ +
Sbjct: 372 LAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLATLQLGQQ-FHVLALKVG 430
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFME----NMPIEPDVSLFGAFLHGCG 611
F + ++ + ++ G +E+A + E + I + +FG HG G
Sbjct: 431 FDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIFGYAQHGQG 482
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 206/663 (31%), Positives = 329/663 (49%), Gaps = 68/663 (10%)
Query: 73 IVDGLTNDKCNTKLVSMYGSF----GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
+ +GL + N ++Y S GH+ A+++F+ MP S+ +MI Y Y
Sbjct: 26 LCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSWNIMISGYSKFGKYS 85
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF--VLTGL 186
+ + M + + FS +L C EG + HC ++K G F V + L
Sbjct: 86 EALNLASEMHCNNVKLNETTFSSLLSICAHSGCSSEGKQFHCLVLK-SGLQIFERVGSAL 144
Query: 187 VDMYAKCRDIGSSRQVFDETLDKN-------------------------------VVSWT 215
V YA DI ++QVFDE DKN VV+WT
Sbjct: 145 VYFYANINDISGAKQVFDELHDKNDLLWDLLLVGYVKCNLMDDALDLFMKIPTRDVVAWT 204
Query: 216 SMIAGYV--QNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+MI+ Y +++C + GL LF MR G VE N+ T S+V AC ++R L GK +HG +
Sbjct: 205 TMISAYARSEHNC-KRGLELFCSMRMNGEVEPNEFTFDSVVRACGRMRYLSWGKVVHGIL 263
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
K G + + +AL+ Y +C I A++V+D + L + +++ G +G + A
Sbjct: 264 TKYGFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLKASNSLLEGLIFAGRINDAE 323
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYA 392
++F + N V+ +L A G + + + R+ + + +N ++ +Y+
Sbjct: 324 EIFCKLR----EKNPVSYNLMLKGYATSGRIEGSKRLFE---RMTHKTTSSLNTMISVYS 376
Query: 393 KCHVIADARYIFETT-SEKDVIAWNSIISGLDDN-----------------VSPDAVTLV 434
+ I A +FE+ SE D + WNS+ISG N V T
Sbjct: 377 RNGEIDKAFKLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFS 436
Query: 435 SVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMRE 494
++ AC L +Q+G +LH ++ ++ SNVYVGT+L++ YAKCG A+ F ++
Sbjct: 437 ALFQACTCLEYIQLGQALHVHAIREAF-DSNVYVGTSLIDMYAKCGSIYDAQTSFASVCL 495
Query: 495 KNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKC 554
N ++A+I GY G G + ++F +ML +V PN ILSACS GMV EG
Sbjct: 496 PNVAAFTALINGYVHHGLGIEAFSVFDEMLKHKVPPNGATLLGILSACSCAGMVKEGMTV 555
Query: 555 FYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYS 614
F+SM + + +P+++HY C+VDLL R+GRL EA F+ MPIE D ++GA L+ C +
Sbjct: 556 FHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFIRCMPIEADRVIWGALLNACWFWM 615
Query: 615 RFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+LGE + KK+L L P Y+++SN+YA G+W+ VR + + K GCS +
Sbjct: 616 DLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWVEKINVRRKLMSLKVKKIRGCSWI 675
Query: 675 DLD 677
D++
Sbjct: 676 DVN 678
>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 200/719 (27%), Positives = 349/719 (48%), Gaps = 98/719 (13%)
Query: 66 KAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
K HA ++ +G N+ TKLV Y + + +F + + YS+ +I
Sbjct: 88 KQIHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKC 147
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
L ++ + + M + DNFV V KAC L+ G VH +VK G D F
Sbjct: 148 RIGLCEEALMGFVEMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVF 207
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L DMY KC + +R+VFDE ++NVV+W +++ GYVQN +E + L + MR+
Sbjct: 208 VASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEG 267
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+E ++T+ + ++A A + + +GK H + G+E+++ L T+ L+ Y K G I A
Sbjct: 268 IEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAE 327
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+FD + D+V+W +I GY Q G + A+ + + + + VT+++++SA+A+
Sbjct: 328 MIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQ 387
Query: 362 NLNMGRMV------HSLGIRLGL--------------------------EDYTVINALVD 389
NL +G+ V HS + L +D + N L+
Sbjct: 388 NLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLS 447
Query: 390 MYAKCHVIADA-RYIFETTSEK-------------------------------------- 410
+YA+ + +A R +E E
Sbjct: 448 VYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQMQSSGIFP 507
Query: 411 DVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLH 453
++++W ++++GL N + P+A ++ +SAC++L ++ G S+H
Sbjct: 508 NLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVH 567
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
Y + SS+V + T+L++ YAKCGD A MVF + + ++AMI Y + G+
Sbjct: 568 GYIIRNQQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNV 627
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC 573
++AL + + ++P+ + FT++LSAC+H G V + + F M P ++HY
Sbjct: 628 KEAIALCRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGL 687
Query: 574 MVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK 633
MVD+LA AG ++AL +E MP + D + + + C + + +L + + + +LE P+
Sbjct: 688 MVDILASAGETDKALRLIEEMPYKSDARMIQSLVASCNMKHKTELMDFLSRHLLETEPEN 747
Query: 634 ACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSR 686
+ YV +SN YA +G W V + RE+MK + L KSPGCS + + +AND + R
Sbjct: 748 SGNYVTISNAYAVEGSWDEVVKTREMMKAKRLKKSPGCSWIRIKGGVHVFVANDKTHLR 806
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 146/496 (29%), Positives = 251/496 (50%), Gaps = 26/496 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C RD+ G ++H I+K G + ++ T LV YAKC +S +F
Sbjct: 70 IYGEILQGCVYERDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDAFEASEVLFS 129
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NV SW ++I + +E L+ F M + + + + ++ AC L+
Sbjct: 130 KLRVRNVYSWAAIIGVKCRIGLCEEALMGFVEMLQNEIFPDNFVVPNVCKACGALQWSRF 189
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY++K G+ + ++L DMY KCG + DAR VFDE+ ++V+W A++VGY Q
Sbjct: 190 GRGVHGYVVKSGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQ 249
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G ++A++L +D + P VT+++ LSASA + + G+ H++ I GLE D +
Sbjct: 250 NGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNIL 309
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------LDD-----------NV 426
+ ++ Y K +I A IF+ EKDV+ WN +ISG ++D N+
Sbjct: 310 GTSNLNFYCKVGLIEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENL 369
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VTL +++SA A +++G + Y + S V TA ++ YA CG A+
Sbjct: 370 KYDCVTLSTLMSAAARTQNLKLGKEVQCYCIRHSFASDIVLASTA-VDMYANCGSIIDAK 428
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD++ K+ + W+ ++ Y G G + LF +M E V PN + + I+ + G
Sbjct: 429 KVFDSVLAKDLILWNTLLSVYAESGLSGEAFRLFYEMQLESVPPNAITWNLIILSFLRNG 488
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLF 603
V E + F M F P++ + M++ L + G EEA+ F+ M + P+
Sbjct: 489 QVNEAKEIFSQMQSSGIF-PNLVSWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSI 547
Query: 604 GAFLHGCGLYSRFDLG 619
L C + G
Sbjct: 548 TVALSACSNLASLHFG 563
>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 989
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 325/628 (51%), Gaps = 24/628 (3%)
Query: 67 AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
+ H ++I GL + LVSMY G + A+ +FDS + + +I Y +N+
Sbjct: 363 SVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNN 422
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLT 184
+ ++ + M+ D KV+ C ++D+ +H V+ + V+
Sbjct: 423 EWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMN 482
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+ MY C ++ SS ++F + + ++SW ++I+GY + + + LF +MR+ ++
Sbjct: 483 ALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQF 542
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ +TL L+++ + G+ LH +K G ++ L L+ MY CG++ + +F
Sbjct: 543 DVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLF 602
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D L S + VS+ ++ GY ++ ++ L LF + PNH+T+ ++L N
Sbjct: 603 DNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQ---NHQ 659
Query: 365 MGRMVHSLGIR-LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-- 421
G+ VH IR + + + + MY++ + + + +F + E+++I WN+I+S
Sbjct: 660 QGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACV 719
Query: 422 ---LDD------------NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
L D N+ PD VT++S++SACA LG +G + A ++G +
Sbjct: 720 QCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLGECVTALILQKGF-GGTL 778
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
V AL++ +++CG AR +FD+ K++VTWSAMI Y M GD +LA+FS M++
Sbjct: 779 LVVNALIDMHSRCGSLSFARELFDSSVVKDSVTWSAMINSYSMHGDCESALAIFSMMIDS 838
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
V+P+++ F ILSACSH+G V + F S+ D P M+HY CMVDLL R+G L+E
Sbjct: 839 GVKPDDITFVIILSACSHSGFVEQARALFKSLQIDHGITPRMEHYACMVDLLGRSGHLDE 898
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
A + + +M P SL + L C + +GE + +++ YV++SN+YAS
Sbjct: 899 AYDVVRSMSFRPSESLLESLLGACRFHGNSKIGEAVGNLLIDSQHGNPRSYVMLSNIYAS 958
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLV 674
G+W +R M+ +GL K G SLV
Sbjct: 959 VGKWNDYEWLRVDMEAKGLRKDAGVSLV 986
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 273/547 (49%), Gaps = 30/547 (5%)
Query: 24 FSYTNQQTPTQHELDQTFASFHSLPSIPCLN----LLGLCKSTGSLKAFHALLIVDGLT- 78
F N + ++ L ++FAS ++P + L +S L HALL V G
Sbjct: 12 FETPNFLSKSKQALAKSFASLTPPRALPHPDAFPEFLHATRSLKCLSKLHALLAVAGAIA 71
Query: 79 -NDKCNTKLVSMYGSFGHVKYARSVFDSM--PNPDFYSFQVMIRWYFLNDLYKDIVEFYK 135
+ T +V Y SFG A SVF P YS + +R + + ++++++ Y+
Sbjct: 72 RDTSVVTAVVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYR 131
Query: 136 CMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCR 194
+ DNF F V+KAC + + G ++HC +++ G + V T L+DMYAK
Sbjct: 132 TLCTF--GSDNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDMYAKAG 189
Query: 195 DIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVT 254
IG+SR VFD K+++SW +MI+GY N +E + M++ + N TL +
Sbjct: 190 WIGASRTVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAG 249
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
AC G LH + LK G+ + L AL+ +Y ++ +R +FD DLVS
Sbjct: 250 ACGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVS 309
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
+ +MI Y Q G ++ +F A PN VT+ SVL + +N+G VH + I
Sbjct: 310 YNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVI 369
Query: 375 RLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------LD 423
+ GL E +V++ALV MY+K + A+++F++ +EK+ + WNSIISG LD
Sbjct: 370 KFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALD 429
Query: 424 -------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+NV+PDA T++ VI C + +++ S+HAY+ + N V ALL Y
Sbjct: 430 TFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRN-RFELNQSVMNALLAMY 488
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
CG+ S+ +F M + ++W+ +I GY D S+ LF M E +Q + V
Sbjct: 489 GDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLI 548
Query: 537 TILSACS 543
++S+ S
Sbjct: 549 GLISSIS 555
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 81/185 (43%), Gaps = 18/185 (9%)
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEK--DVIAWNSIISGLDDN----------- 425
D +V+ A+VD Y A A +F + V + N + D+
Sbjct: 72 RDTSVVTAVVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFHRELLDLYR 131
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
D T VI ACA++ + +G +H + G NV V TALL+ YAK G
Sbjct: 132 TLCTFGSDNFTFPPVIKACAAVSCLPLGREMHCRVLRTGH-EGNVGVQTALLDMYAKAGW 190
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
++R VFD M +K+ ++W+AMI GY + G ++ +M + ++ N I A
Sbjct: 191 IGASRTVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGA 250
Query: 542 CSHTG 546
C G
Sbjct: 251 CGAAG 255
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 281/548 (51%), Gaps = 52/548 (9%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
P+ F L+ A R + +F ++ VS+ ++IAG+ + L++ +
Sbjct: 70 PNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTL 129
Query: 238 -REGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
R G V ++IT+ ++V A + L G+ H IL++G +N+ + + L+ MY K G
Sbjct: 130 LRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMG 189
Query: 296 NIRDARSVFDEL-----------------CSI--------------DLVSWTAMIVGYTQ 324
I DA+ VFDE+ C + D ++WT M+ G+TQ
Sbjct: 190 LIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQ 249
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+G +AL F ++ + T S+L+A L L G+ +H+ IR +D +
Sbjct: 250 NGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFV 309
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------V 426
+ALVDMY+KC I A F S K++I+W ++I G N +
Sbjct: 310 GSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGI 369
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD TL SVIS+CA+L +++ G+ H + GL+ + V AL+ Y KCG + A
Sbjct: 370 DPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHY-ITVSNALVTLYGKCGSIEDAH 428
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+FD M + V+W+A++ GY G ++ LF ML ++V+P+ V F +LSACS G
Sbjct: 429 RLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
V +G F+SM +D VP HY CM+DL +R+GRL+EA EF++ MP+ PD +G
Sbjct: 489 FVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTL 548
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C L ++G+ + +LE+ P YVL+ +++A+ G W +V Q+R M+ R +
Sbjct: 549 LSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVK 608
Query: 667 KSPGCSLV 674
K PGCS +
Sbjct: 609 KEPGCSWI 616
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 245/512 (47%), Gaps = 86/512 (16%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++ YG G AR VFD+ P+P+ +++ ++ L D+ + M +R
Sbjct: 47 LLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSY 106
Query: 146 NFVF---------------------------------SKVLKACCELRDIDEGMKVHCEI 172
N V S ++ A L D G + HC+I
Sbjct: 107 NAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQI 166
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVV------------------- 212
+++G G ++FV + LV MYAK IG +++VFDE KNVV
Sbjct: 167 LRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEAR 226
Query: 213 ------------SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
+WT+M+ G+ QN + L F RMR + +Q T GS++TAC L
Sbjct: 227 RLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALS 286
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
AL QGK +H YI++ + N + +AL+DMY KC +I+ A + F + +++SWTA+IV
Sbjct: 287 ALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIV 346
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
GY Q+G ++A+++F++ + P+ T+ SV+S+ A L +L G H L + GL
Sbjct: 347 GYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMH 406
Query: 381 Y-TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------L 422
Y TV NALV +Y KC I DA +F+ D ++W ++++G L
Sbjct: 407 YITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKML 466
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSS-LHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+V PD VT + V+SAC+ G V+ G S H+ G++ + + T +++ Y++ G
Sbjct: 467 AKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHY-TCMIDLYSRSGR 525
Query: 482 AQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
+ A M + + W ++ ++GD
Sbjct: 526 LKEAEEFIKQMPMHPDAIGWGTLLSACRLRGD 557
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 11/275 (4%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNP 109
++L C + +L K HA +I ++ + LV MY +K A + F M
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCK 336
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+ S+ +I Y N ++ V + M++ + D+F V+ +C L ++EG + H
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFH 396
Query: 170 CEIVKVGGPDSFVL--TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
C + V G ++ LV +Y KC I + ++FDE L + VSWT+++ GY Q A
Sbjct: 397 C-LALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRA 455
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGI-EINSHLVT 285
+E + LF +M V+ + +T +++AC++ + +G + H GI I+ H T
Sbjct: 456 KETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHY-T 514
Query: 286 ALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMI 319
++D+Y + G +++A ++ D + W ++
Sbjct: 515 CMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLL 549
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 126/351 (35%), Gaps = 115/351 (32%)
Query: 383 VINALVDMYAKCHVIADARYIFETT-------------------------------SEKD 411
++N L+ Y K A AR +F+ T +++D
Sbjct: 43 LLNHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRD 102
Query: 412 VIAWNSIISGLD-------------------DNVSPDAVTLVSVISACASLGAVQVGSSL 452
+++N++I+G +V P +T+ +++ A ++LG +G
Sbjct: 103 TVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQF 162
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAK---CGDA--------------------------- 482
H + G N +VG+ L+ YAK GDA
Sbjct: 163 HCQILRLG-FGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKM 221
Query: 483 -QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ AR +F+ M +++ +TW+ M+ G+ G +L F M + + ++ F +IL+A
Sbjct: 222 VEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTA 281
Query: 542 CSHTGMVGEGWKC---------------------FYSMCRDFKFVP------SMKHYVCM 574
C + +G + YS CR K S K+ +
Sbjct: 282 CGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISW 341
Query: 575 VDLLARAGR---LEEALEFMENMP---IEPDVSLFGAFLHGCGLYSRFDLG 619
L+ G+ EEA+ M I+PD G+ + C + + G
Sbjct: 342 TALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEG 392
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/614 (30%), Positives = 301/614 (49%), Gaps = 75/614 (12%)
Query: 82 CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL 141
C ++S Y G V A+ +FD MP + S+ M+ Y N + +EF+ M +R
Sbjct: 104 CWNAMISGYVKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDER- 162
Query: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
D ++ ++ ++ D+D K E K P+ ++ +A+ +I SR+
Sbjct: 163 ---DVVSWNLMVDGFIQVGDLDSAWKFFQETQK---PNVVSWVTMLSGFARNGNILESRR 216
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FD+ +N+VSW +MI+ YVQ E LF M E + ++ +++ ++
Sbjct: 217 LFDQMPSRNIVSWNAMISAYVQRCEIDEASRLFEEM----PERDSVSWTTMINGYVRIGK 272
Query: 262 LHQGKWLHGYI--LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L + + L + IG + TA++ Y++C + +AR FDE+ + D+V W AMI
Sbjct: 273 LDEARELLNEMPYRNIGAQ------TAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMI 326
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY G ++AL L RMV+ +
Sbjct: 327 AGYAHHGRINEALCLSK------------------------------RMVN--------K 348
Query: 380 DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------- 422
D N ++ YA+ + A IFE E+D+++WNS+I+G
Sbjct: 349 DMVTWNTMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMG 408
Query: 423 DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ PD ++ +S+CA++ A+QVG+ LH K G L+ V V AL+ YAKCG
Sbjct: 409 HEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLV-VNNALITMYAKCGRI 467
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
A +VF+ + + ++W+++IGGY + G G +L LF +M +E + P+EV F ILSAC
Sbjct: 468 LEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSAC 527
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
+H GMV G K F M + + P +HY CMVDLL R GRL+EA E + M ++ +
Sbjct: 528 NHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGV 587
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L C + +LG + K+ E P K YVL+SN++A RW V +VR LM
Sbjct: 588 WGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNA 647
Query: 663 RGLSKSPGCSLVDL 676
K PGCS V++
Sbjct: 648 SSTVKEPGCSWVEV 661
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 186/404 (46%), Gaps = 41/404 (10%)
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
E N+ +++ +Y K G I AR++FD++ +LVSW M+ GY +G D+A KLF
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGR-MVHSL--GIRLGLEDYTVINALVDMYAKC 394
D F + +++ + G + R + SL R G+ + NA++ Y K
Sbjct: 63 MPRRDLF----SWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACW---NAMISGYVKK 115
Query: 395 HVIADARYIFETTSEKDVIAWNSIISGLDDNV-------------SPDAVTLVSVISACA 441
+ +A+ +F+ K++I+WNS+++G N D V+ ++
Sbjct: 116 GRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVD--- 172
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
G +QVG A+ Q NV +L+ +A+ G+ +R +FD M +N V+W+
Sbjct: 173 --GFIQVGDLDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWN 230
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
AMI Y + + + LF +M + + V +TT+++ G + E + M
Sbjct: 231 AMISAYVQRCEIDEASRLFEEM----PERDSVSWTTMINGYVRIGKLDEARELLNEM--P 284
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
++ + + M+ + +++EA F + + DV + A + G + R +
Sbjct: 285 YRNIGAQ---TAMISGYIQCNKVDEARRFFDEIGT-WDVVCWNAMIAGYAHHGRINEALC 340
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
+ K+M ++ D + ++S YA G+ R ++ E M +R L
Sbjct: 341 LSKRM--VNKDMVTWNTMIS-CYAQVGQMDRAVKIFEEMGERDL 381
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 164/405 (40%), Gaps = 85/405 (20%)
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTA----CAKLRAL 262
+KN V++ SMI+ Y +N LF++M R V N + G L KL +
Sbjct: 3 EKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVI 62
Query: 263 HQGKWLHGYILKIG-------IEINSHLV--------------TALLDMYVKCGNIRDAR 301
+ L + L I +E L A++ YVK G + +A+
Sbjct: 63 MPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAK 122
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT-----------------------DK 338
+FDE+ +L+SW +M+ GYTQ+ L+ F D
Sbjct: 123 RLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGDLDS 182
Query: 339 KWADFF-----PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAK 393
W FF PN V+ ++LS A+ GN+ R + ++ + NA++ Y +
Sbjct: 183 AW-KFFQETQKPNVVSWVTMLSGFARNGNILESRRLFD---QMPSRNIVSWNAMISAYVQ 238
Query: 394 CHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
I +A +FE E+D ++W ++I+G V++G
Sbjct: 239 RCEIDEASRLFEEMPERDSVSWTTMINGY-----------------------VRIGKLDE 275
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
A + N+ TA+++ Y +C AR FD + + V W+AMI GY G
Sbjct: 276 ARELLNEMPYRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRI 335
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
+L L M+N+++ V + T++S + G + K F M
Sbjct: 336 NEALCLSKRMVNKDM----VTWNTMISCYAQVGQMDRAVKIFEEM 376
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 11/170 (6%)
Query: 461 LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
+ N ++++ YAK G +AR +FD M +N V+W+ M+ GY G + LF
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60
Query: 521 SDMLNEEVQPNEVIFT-TILSAC-SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
+ P +F+ T++ C + G V + + F S+ ++ + + M+
Sbjct: 61 V------IMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYR--KGVACWNAMISGY 112
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+ GR+ EA + MP++ +S + + L G + LG +M E
Sbjct: 113 VKKGRVNEAKRLFDEMPVKNLIS-WNSMLAGYTQNRKMRLGLEFFNEMDE 161
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 56 LGLCKSTGSLKA---FHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L C + +L+ H +++ G N N L++MY G + A VF+ + + D
Sbjct: 423 LSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHADV 482
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ +I Y +N K+ ++ ++ M D F +L AC +D G+K+
Sbjct: 483 ISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKC 542
Query: 172 IVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ KV + + L + YA D+ DE +
Sbjct: 543 MSKV-----YAIEPLAEHYACMVDLLGRVGRLDEAFE 574
>gi|30689384|ref|NP_194969.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75147159|sp|Q84MA3.1|PP345_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g32430, mitochondrial; Flags: Precursor
gi|30102674|gb|AAP21255.1| At4g32430 [Arabidopsis thaliana]
gi|110742925|dbj|BAE99358.1| hypothetical protein [Arabidopsis thaliana]
gi|332660658|gb|AEE86058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 325/647 (50%), Gaps = 36/647 (5%)
Query: 56 LGLCKSTGSLK---AFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L L G LK H G T+ C + ++ MY G A +F+++ +PD
Sbjct: 83 LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 142
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ ++ + N + + F M+ D F +S L C G+++
Sbjct: 143 VSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 199
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC-AQE 229
+VK G D V + MY++ +R+VFDE K+++SW S+++G Q E
Sbjct: 200 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 259
Query: 230 GLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+V+F + MREG VE + ++ S++T C L + +HG +K G E + L+
Sbjct: 260 AVVIFRDMMREG-VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
Y KCG + +SVF ++ ++VSWT MI S D A+ +F + ++ +PN V
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEV 373
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETT 407
T +++A + G +H L I+ G + + +V N+ + +YAK + DA+ FE
Sbjct: 374 TFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 433
Query: 408 SEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLGAVQV--G 449
+ +++I+WN++ISG N P+ T SV++A A + V G
Sbjct: 434 TFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQG 493
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
HA+ K GL S V V +ALL+ YAK G+ + VF+ M +KN W+++I Y
Sbjct: 494 QRCHAHLLKLGLNSCPV-VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 552
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
GD + LF M+ E V P+ V F ++L+AC+ GMV +G++ F M + PS +
Sbjct: 553 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE 612
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVD+L RAGRL+EA E M +P P S+ + L C L+ +G + + +E+
Sbjct: 613 HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEM 672
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P+ + YV + N+YA W + ++R+ M+++ +SK G S +D+
Sbjct: 673 KPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
>gi|293333352|ref|NP_001168668.1| uncharacterized protein LOC100382456 [Zea mays]
gi|223950067|gb|ACN29117.1| unknown [Zea mays]
Length = 602
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 306/556 (55%), Gaps = 25/556 (4%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQ 201
D F + K+C LR G VH G D+FV T LVDMYAKC + + +
Sbjct: 46 DASTFPSLAKSCAALRLPGLGRAVHALAFLSGAAVSRDAFVRTSLVDMYAKCGRLPDAHR 105
Query: 202 VFDETL--DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA-K 258
+FDET + +V+W MI+ Y ++ +E + +FN MR V + T+ L++ CA
Sbjct: 106 LFDETPCSSRTLVAWNCMISAYGRSSQVEEAVGVFNAMRRAEVRPSGSTVVGLLSGCADS 165
Query: 259 LRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAM 318
+ A + G ++G +K G++ + + ++L M V+ G + AR +FD + + +V+W+AM
Sbjct: 166 VSARYPGVSVYGLTIKSGLDADLLVSNSVLTMLVRGGQLDSARLLFDRVENKSVVTWSAM 225
Query: 319 IVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
Y Q+G + LF+ + + + V +A++++A+ GN + + VH+L I++G
Sbjct: 226 ASAYLQTGDWMEVFALFSSMRETEQPMDSVVLANLITAAMLFGNNLVAKGVHALAIKVGF 285
Query: 379 EDYTVINA-LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
+ + A LV++Y+KC + AR +F++ K VI W S+++G
Sbjct: 286 DRQEDLAASLVNLYSKCGNLLAAREVFDSLQWKSVIMWTSMLNGYVECGYPDEALATFDA 345
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L V P+ T+++V+SA A+LG+ V + + K L S++ V T L++ Y KCG
Sbjct: 346 MLCAKVEPNKATVLAVLSAGANLGSANVAQKVEEH-VKAMELQSDLQVCTRLIDMYCKCG 404
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
Q AR +FD++ ++ WSAMI G+ G+G ++ LF++M ++ V+P+ ++FT IL+
Sbjct: 405 SIQRARKIFDSVPNRDLAIWSAMINGHACNGEGSEAVVLFNEMQSKGVRPDAIVFTHILT 464
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSH+G V EG +CF+SM + PS++HY+CM+DLL +AG L A++F MP+
Sbjct: 465 ACSHSGSVDEGLRCFHSMTAEHGIEPSVEHYMCMIDLLCKAGHLSSAIKFFGEMPVRLRN 524
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
+ + + E M + +L L + + VL+SN+ + G+W + R L+
Sbjct: 525 QVLAPLISAHRVNGADSSVEFMSEGLLNLGSQDSGHCVLISNMLSCLGQWKKARSYRTLI 584
Query: 661 KQRGLSKSPGCSLVDL 676
++GL K PG S ++L
Sbjct: 585 SKQGLVKKPGWSYIEL 600
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 216/461 (46%), Gaps = 29/461 (6%)
Query: 66 KAFHALLIVDGLTNDK---CNTKLVSMYGSFGHVKYARSVFDSMP--NPDFYSFQVMIRW 120
+A HAL + G + T LV MY G + A +FD P + ++ MI
Sbjct: 67 RAVHALAFLSGAAVSRDAFVRTSLVDMYAKCGRLPDAHRLFDETPCSSRTLVAWNCMISA 126
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE-LRDIDEGMKVHCEIVKVG-GP 178
Y + ++ V + MR+ +L C + + G+ V+ +K G
Sbjct: 127 YGRSSQVEEAVGVFNAMRRAEVRPSGSTVVGLLSGCADSVSARYPGVSVYGLTIKSGLDA 186
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D V ++ M + + S+R +FD +K+VV+W++M + Y+Q E LF+ MR
Sbjct: 187 DLLVSNSVLTMLVRGGQLDSARLLFDRVENKSVVTWSAMASAYLQTGDWMEVFALFSSMR 246
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
E + + L +L+TA K +H +K+G + L +L+++Y KCGN+
Sbjct: 247 ETEQPMDSVVLANLITAAMLFGNNLVAKGVHALAIKVGFDRQEDLAASLVNLYSKCGNLL 306
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
AR VFD L ++ WT+M+ GY + GYPD+AL F A PN T+ +VLSA A
Sbjct: 307 AAREVFDSLQWKSVIMWTSMLNGYVECGYPDEALATFDAMLCAKVEPNKATVLAVLSAGA 366
Query: 359 QLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNS 417
LG+ N+ + V + L+ D V L+DMY KC I AR IF++ +D+ W++
Sbjct: 367 NLGSANVAQKVEEHVKAMELQSDLQVCTRLIDMYCKCGSIQRARKIFDSVPNRDLAIWSA 426
Query: 418 IISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG-SSLHAYSTKQ 459
+I+G N V PDA+ +++AC+ G+V G H+ + +
Sbjct: 427 MINGHACNGEGSEAVVLFNEMQSKGVRPDAIVFTHILTACSHSGSVDEGLRCFHSMTAEH 486
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM--REKNTV 498
G+ S V +++ K G SA F M R +N V
Sbjct: 487 GIEPS-VEHYMCMIDLLCKAGHLSSAIKFFGEMPVRLRNQV 526
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 191/629 (30%), Positives = 324/629 (51%), Gaps = 30/629 (4%)
Query: 76 GLTNDKCNTKLVSMYGSFGH---VKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE 132
G T+ +L++ Y + G + AR VFD +P PD S+ ++ + ++D
Sbjct: 22 GATSPTPWNQLLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWR 81
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYA 191
K M R F L++ R + G ++ VK G D+ F + L+D+YA
Sbjct: 82 LLKDMHARGLTASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYA 141
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC + +R+VFD +N VSW ++IAGY ++ + + LF M+ + + T +
Sbjct: 142 KCGRLSDARRVFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAA 201
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ + LHG I K G + ++ A + Y +CG D+R +FD + S D
Sbjct: 202 LLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRD 261
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLG-NLNMGRMV 369
L+SW +M+ Y G D+A++ F + + P+ + SV+S ++ G + GR +
Sbjct: 262 LISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSI 321
Query: 370 HSLGIRLGLEDYT-VINALVDMYAK----CHVIADARYIFETTSEKDVIAWNSIISGLD- 423
HSL +++GLE T V NA++ MY + C ++ DA F++ KD ++WNS+++G
Sbjct: 322 HSLVVKIGLEGVTHVCNAMIAMYTRFTENC-MMEDAYKCFDSLVFKDAVSWNSMLTGYSH 380
Query: 424 ----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
+NVS D L + + +C+ L +++G +H+ + G SSN +
Sbjct: 381 HGLSSDALRFFRFMRAENVSTDEFALSAALRSCSDLAVLRLGRQVHSLVIQSGF-SSNDF 439
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
V ++L+ Y+KCG AR F+ + ++V W++M+ GY G LFS+ML+ +
Sbjct: 440 VSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQHGQAQTVTDLFSEMLDHK 499
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
V + V F +L+A SH G+V EG + SM +K M+HY C VDL RAG+L++A
Sbjct: 500 VPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYKIPLRMEHYACGVDLYGRAGQLDKA 559
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
E +E+MP +PD ++ L C ++ +L + + P + YVL+S++Y+
Sbjct: 560 KELIESMPFQPDAMVWMTLLGACRIHGNMELASDVASHLFVAEPRQHSTYVLLSSMYSGR 619
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
G W V+++MK RGLSK PG S +++
Sbjct: 620 GMWSDRATVQKVMKNRGLSKVPGWSWIEV 648
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/575 (29%), Positives = 303/575 (52%), Gaps = 58/575 (10%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
+L+ ++ + ++H +++K L+ L+ +Y+ + S ++F+
Sbjct: 12 LLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPA 71
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
++W S+I Y + + L F M + + S++ +CA L L+ G+ LHGY
Sbjct: 72 LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131
Query: 272 ILKIGIEINSHLVTALLDMYVK-------------CGNIRD------------------- 299
I+++G++ + + AL++MY K G + D
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
R +F+ + DLVSW +I G ++G ++ L++ + A+ P+ T++SVL A+
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
+++ G+ +H IR GL+ D V ++L+DMYAKC +AD+ +F +E+D I+WNSI
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I+G N + P + + S++ ACA L + +G LH Y T+ G
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG- 370
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
N+++ ++L++ YAKCG+ ++A+ +FD MR ++ V+W+AMI G + G ++ LF
Sbjct: 371 FDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFE 430
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
M E ++ +L+ACSH G+V E WK F SM RDF P ++HY + DLL RA
Sbjct: 431 QMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRA 483
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
GRLEEA +F+ M I P S++ L C ++ D+ E + ++LE+ P+ Y+L++
Sbjct: 484 GRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLA 543
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
N+Y++ RW + R M++ G+ K+P CS +++
Sbjct: 544 NIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEV 578
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/295 (34%), Positives = 155/295 (52%), Gaps = 13/295 (4%)
Query: 100 RSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCEL 159
R +F+ MP D S+ +I N LY++ + + M + D+F S VL E
Sbjct: 193 RKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAEN 252
Query: 160 RDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
DI G ++H C I + D +V + L+DMYAKC + S +VF +++ +SW S+I
Sbjct: 253 VDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSII 312
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
AG VQN EGL F +M ++ + S++ ACA L LH GK LHGYI + G +
Sbjct: 313 AGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFD 372
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
N + ++L+DMY KCGNIR A+ +FD + D+VSWTAMI+G G A++LF
Sbjct: 373 ENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQM 432
Query: 339 KWADFFPNHVTIASVLSASAQLGNLN-----MGRMVHSLGIRLGLEDYTVINALV 388
+ I +VL+A + G ++ M GI G+E Y ++ L+
Sbjct: 433 ETEG-------IKAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLL 480
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 194/389 (49%), Gaps = 44/389 (11%)
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+F+++ P +++ +IR Y + L + + M D+ VF VLK+C L D
Sbjct: 62 LFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMD 121
Query: 162 IDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS--------------------- 199
++ G +H I++VG D + L++MY+K R + S
Sbjct: 122 LNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSV 181
Query: 200 -----------RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQIT 248
R++F+ +K++VSW ++IAG +N +E L + M ++ + T
Sbjct: 182 RTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFT 241
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
L S++ A+ + +GK +HG ++ G++ + ++ ++L+DMY KC + D+ VF L
Sbjct: 242 LSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLT 301
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
D +SW ++I G Q+G D+ L+ F A P + +S++ A A L L++G+
Sbjct: 302 ERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQ 361
Query: 369 VHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD-DNV 426
+H R G E+ + ++LVDMYAKC I A+ IF+ +D+++W ++I G
Sbjct: 362 LHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQ 421
Query: 427 SPDAVTLV---------SVISACASLGAV 446
+PDA+ L +V++AC+ G V
Sbjct: 422 APDAIELFEQMETEGIKAVLTACSHGGLV 450
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 121/250 (48%), Gaps = 13/250 (5%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H I GL D + L+ MY V + VF + D S+ +I N
Sbjct: 259 KEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQN 318
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVL 183
L+ + + F++ M + ++ FS ++ AC L + G ++H I + G ++ F+
Sbjct: 319 GLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIA 378
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
+ LVDMYAKC +I +++Q+FD +++VSWT+MI G + A + + LF +M E
Sbjct: 379 SSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQME---TE 435
Query: 244 GNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
G + +++TAC+ + + K+ + GI A+ D+ + G + +A
Sbjct: 436 G----IKAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA-- 489
Query: 303 VFDELCSIDL 312
+D +C + +
Sbjct: 490 -YDFICGMHI 498
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 270/484 (55%), Gaps = 29/484 (5%)
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TAL 287
GL + ++ G + + L+ C +L + QG+ +H +++ +++HLV +
Sbjct: 71 GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNII 129
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
++MY KCG + DAR +FDE+ + D+V+WTA+I G++Q+ P AL LF PNH
Sbjct: 130 VNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNH 189
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFET 406
T++S+L AS L+ G +H+ ++ G + + +ALVDMYA+C + A+ F+
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249
Query: 407 TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
K ++WN++ISG N P T SV SACAS+GA++ G
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQG 309
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA+ K GL ++G LL+ YAK G A+ VFD + + + V+W+ M+ G
Sbjct: 310 KWVHAHMIKSGL-KLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L F ML ++PNE+ F +L+ACSH+G++ EG ++ + + +K P +
Sbjct: 369 HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLY-YFELMKKYKVEPDVP 427
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HYV VDLL R G L+ A F+ MPIEP +++GA L C ++ +LG ++ EL
Sbjct: 428 HYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFEL 487
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFS 683
P + +L+SN+YAS GRW V +VR++MK+ G+ K P CS V+++ +AND +
Sbjct: 488 DPHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDET 547
Query: 684 FSRV 687
++
Sbjct: 548 HPQI 551
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 207/388 (53%), Gaps = 24/388 (6%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQV 202
D ++SK+LK C L +++G VH +V D+ ++ +V+MYAKC + +R++
Sbjct: 86 DYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRM 145
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
FDE K++V+WT++IAG+ QN+ ++ L+LF +M ++ N TL SL+ A L
Sbjct: 146 FDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGL 205
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G LH + LK G + + ++ +AL+DMY +CG++ A+ FD + + VSW A+I G+
Sbjct: 206 DPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGH 265
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT 382
+ G + AL L + +F P H T +SV SA A +G L G+ VH+ I+ GL+
Sbjct: 266 ARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIA 325
Query: 383 VI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDD 424
I N L+DMYAK I DA+ +F+ + DV++WN++++G L
Sbjct: 326 FIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRI 385
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYS-TKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ P+ ++ + V++AC+ G + G L+ + K+ + +V ++ + G
Sbjct: 386 GIEPNEISFLCVLTACSHSGLLDEG--LYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLD 443
Query: 484 SA-RMVFDAMREKNTVTWSAMIGGYGMQ 510
A R + + E W A++G M
Sbjct: 444 RAERFIREMPIEPTAAVWGALLGACRMH 471
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 172/337 (51%), Gaps = 3/337 (0%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
+V+MY G + AR +FD MP D ++ +I + N+ +D + + M + + +
Sbjct: 129 IVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPN 188
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFD 204
+F S +LKA +D G ++H +K G S +V + LVDMYA+C + +++ FD
Sbjct: 189 HFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFD 248
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
K+ VSW ++I+G+ + + L L +M+ + T S+ +ACA + AL Q
Sbjct: 249 GMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQ 308
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GKW+H +++K G+++ + + LLDMY K G+I DA+ VFD L D+VSW M+ G Q
Sbjct: 309 GKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQ 368
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
G + L F PN ++ VL+A + G L+ G L + +E D
Sbjct: 369 HGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPH 428
Query: 384 INALVDMYAKCHVIADA-RYIFETTSEKDVIAWNSII 419
VD+ + ++ A R+I E E W +++
Sbjct: 429 YVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/546 (31%), Positives = 292/546 (53%), Gaps = 30/546 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
F +L++C ++ + ++ +IV G + FV + ++ + I +R++FD+
Sbjct: 15 FITLLRSC---KNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIP 71
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
N +W +M GY+QN ++ +VLF + N T ++ +C KL + +G+
Sbjct: 72 QPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEE 131
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H K G + NS + T+L+DMY K G + DA VF E+ ++V WTA+I GY G
Sbjct: 132 VHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGD 191
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINAL 387
+LF D P + + S + + NM L ++ D NA+
Sbjct: 192 VVSGRRLF------DLAPERDVVMWSVLISGYIESKNMA-AARELFDKMPNRDTMSWNAM 244
Query: 388 VDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------------LDDNVSPD 429
++ YA + +F+ E++V +WN +I G ++ +V P+
Sbjct: 245 LNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPN 304
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
TLV+V+SAC+ LGA+ +G +H Y+ G N++VG L++ YAKCG ++A +VF
Sbjct: 305 DFTLVAVLSACSRLGALDMGKWVHVYAESIGY-KGNLFVGNVLIDMYAKCGVIENAVVVF 363
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
+ + K+ ++W+ +I G + G +L +F M +E +P+ V F ILSAC+H G+V
Sbjct: 364 NCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVK 423
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
+G+ F SM + VP ++HY CMVDLL RAG L++AL F+ MPIEPD ++ A L
Sbjct: 424 DGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGA 483
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C LY ++ E+ +++++EL P+ +V+VSN+Y GR V +++ M+ G K P
Sbjct: 484 CRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLP 543
Query: 670 GCSLVD 675
GCS+++
Sbjct: 544 GCSVIE 549
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 223/476 (46%), Gaps = 30/476 (6%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
+ LL CK+ L A ++ GL ND ++ F + +AR +FD +P P+
Sbjct: 16 ITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNT 75
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
++ M R Y N ++D V + + + + F F ++K+C +L + EG +VHC
Sbjct: 76 ATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCC 135
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
K G +SFV T L+DMY+K + + +VF E ++NVV WT++I GY+ G
Sbjct: 136 ATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSG 195
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
LF+ E V + L++ + + + + L + ++ A+L+
Sbjct: 196 RRLFDLAPERDV----VMWSVLISGYIESKNMAAARELFDKMPN----RDTMSWNAMLNG 247
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVT 349
Y G + VFDE+ ++ SW +I GY ++G + L+ F PN T
Sbjct: 248 YAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFT 307
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTS 408
+ +VLSA ++LG L+MG+ VH +G + + V N L+DMYAKC VI +A +F
Sbjct: 308 LVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNCLD 367
Query: 409 EKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSS 451
KD+I+WN+II+GL + PD VT V ++SAC +G V+ G
Sbjct: 368 RKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFL 427
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ + +++ + G A M E + V W+A++G
Sbjct: 428 YFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGA 483
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/483 (34%), Positives = 267/483 (55%), Gaps = 34/483 (7%)
Query: 226 CAQ-EGLVLFNRMREGF-------VEGNQITLGS-----LVTACAKLRALHQGKWLHGYI 272
C+Q E LV+ NR RE +E + +G+ LV+AC LR++ K + Y+
Sbjct: 85 CSQIEKLVVCNRHREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYM 144
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
+ G E + +++ +L M+VKCG + DAR +FDE+ D+ SW M+ G +G +A
Sbjct: 145 INSGFEPDLYVMNRVLFMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAF 204
Query: 333 KLFTDKKWADFFPNHV-TIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDM 390
+LF W +F T A+++ ASA LG + +G+ +HS ++ G+ +D+ V AL+DM
Sbjct: 205 RLFL-CMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDM 263
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTL 433
Y+KC I DA +F+ EK + WNSII+ D + D T+
Sbjct: 264 YSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTI 323
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
VI CA L +++ HA + G ++++ TAL++FY+K G + AR VF+ MR
Sbjct: 324 SIVIRICARLASLEHAKQAHAALVRHGF-ATDIVANTALVDFYSKWGRMEDARHVFNRMR 382
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
KN ++W+A+I GYG G G ++ +F ML E V P V F +LSACS++G+ GW+
Sbjct: 383 HKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWE 442
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
FYSM RD K P HY CM++LL R L+EA + P +P +++ A L C ++
Sbjct: 443 IFYSMKRDHKVKPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMH 502
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
+LG++ +K+ + P+K C Y+++ NLY S G+ + + +K++GL P CS
Sbjct: 503 KNLELGKLAAEKLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSW 562
Query: 674 VDL 676
V++
Sbjct: 563 VEV 565
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 177/341 (51%), Gaps = 25/341 (7%)
Query: 143 EHDNF-----VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
EHD + + ++ AC LR I +V ++ G PD +V+ ++ M+ KC +
Sbjct: 110 EHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLM 169
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+R++FDE +K+V SW +M+ G V E LF M + F +G T +++ A
Sbjct: 170 LDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRAS 229
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A L + GK +H LK G+ + + AL+DMY KCG+I DA VFD++ V W
Sbjct: 230 AGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWN 289
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++I Y GY ++AL L+ + + + +H TI+ V+ A+L +L + H+ +R
Sbjct: 290 SIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAKQAHAALVRH 349
Query: 377 GLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-------------- 421
G V N ALVD Y+K + DAR++F K+VI+WN++I+G
Sbjct: 350 GFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMF 409
Query: 422 ---LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
L + V+P VT ++V+SAC+ G Q G + YS K+
Sbjct: 410 EQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIF-YSMKR 449
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 138/275 (50%), Gaps = 6/275 (2%)
Query: 93 FGHVKY-----ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
F HVK AR +FD MP D S+ M+ + + + CM K + +
Sbjct: 161 FMHVKCGLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSR 220
Query: 148 VFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ +++A L + G ++H C + + G D FV L+DMY+KC I + VFD+
Sbjct: 221 TFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQM 280
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+K V W S+IA Y + ++E L L+ MR+ + T+ ++ CA+L +L K
Sbjct: 281 PEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARLASLEHAK 340
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
H +++ G + TAL+D Y K G + DAR VF+ + +++SW A+I GY G
Sbjct: 341 QAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALIAGYGNHG 400
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+A+++F P HVT +VLSA + G
Sbjct: 401 QGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSG 435
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
++ +C SL K HA L+ G D NT LV Y +G ++ AR VF+ M + +
Sbjct: 326 VIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKN 385
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC 156
S+ +I Y + ++ VE ++ M + + F VL AC
Sbjct: 386 VISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSAC 431
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 192/653 (29%), Positives = 334/653 (51%), Gaps = 34/653 (5%)
Query: 69 HALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYK 128
HA L+ G ++ +L++ Y + G + AR VFD +P+PD S+ ++ + ++
Sbjct: 15 HATLLKSGASSPTPWNQLLTAYSATG-LAAARRVFDEIPHPDAASWNSLLAAHVAAGAHR 73
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLV 187
D + M R F L++ R + G ++ V+ G D+ F + L+
Sbjct: 74 DAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALL 133
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
D+YAKC +G +R+VFD +N+VSW ++IAGY + E + LF M+ +
Sbjct: 134 DVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGT 193
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
T L+ A R + LHG I+K G + + A + Y +C + D+R +FD +
Sbjct: 194 TFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGI 253
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASVLSASAQLG-NLNM 365
S DL+SW +M+ Y G D+A++ F + + P+ + S +S ++ G +
Sbjct: 254 ESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQ 313
Query: 366 GRMVHSLGIRLGLEDYT-VINALVDMYAK----CHVIADARYIFETTSEKDVIAWNSIIS 420
GR +HSL I+ GLE T V NA++ MY + C ++ DA F + KD ++WNS+++
Sbjct: 314 GRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNC-MMEDAYNCFSSLVFKDAVSWNSMLT 372
Query: 421 GLD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G +N+ D L + + +C+ L +++G +H+ + G +
Sbjct: 373 GYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQVHSLVVQSGF-A 431
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
SN +V ++L+ Y+KCG AR F+ + ++V W++M+ GY G LF++M
Sbjct: 432 SNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQHGQAQTVTDLFNEM 491
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
L+ EV + V F +++A SH G+V EG + +M +K M+HY C VDL RAG+
Sbjct: 492 LDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYKIPMRMEHYACGVDLYGRAGQ 551
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L++A E +E+MP +PD ++ L C ++ +L + + + P + YVL+S++
Sbjct: 552 LDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVARHLFVAEPRQHSTYVLLSSM 611
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD------IANDFSFSRVVSL 690
Y+ G W V+++M+ R LSK PG S +++ A+D S R+V +
Sbjct: 612 YSGLGMWSDRATVQKVMRNRALSKIPGWSWIEVKNEVHSFNADDRSHPRMVEI 664
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 284/544 (52%), Gaps = 29/544 (5%)
Query: 152 VLKACCELRDIDEGMK-VHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKN 210
++K C L E +K +H I+K + T L+ YA I + +F + N
Sbjct: 10 LIKQCVTL----EALKSLHASILK-SHLHPHLCTSLIAQYASLGSISHAYALFSTSHSSN 64
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
V W +I + ++ L L++RM + ++ T L+ AC L G H
Sbjct: 65 VFLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHA 124
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+++ G E + + +L+ MY + G +R VF+ + ++VSW++M+ Y +G ++
Sbjct: 125 HVVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEE 184
Query: 331 ALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVD 389
L LF PN S+++A A + + + I GL+ D +V NA +
Sbjct: 185 GLLLFWRMLNEGIAPNR---GSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMG 241
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-----------------NVSPDAVT 432
MYA+C I AR F +KD++AW S+I + PD+VT
Sbjct: 242 MYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVT 301
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
L+S+I A ++L + Q+ +H T+ +++ + TA+++ Y KCG+ + AR FD M
Sbjct: 302 LLSLIHAVSNLASFQLARFVHGVITRS-FFKNHIALDTAVIDLYVKCGNLEYARKCFDRM 360
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
+N ++WS MI GYGM G G +L LF D + ++P+ + F +LSACSH G++ EGW
Sbjct: 361 SARNLISWSTMISGYGMHGHGREALCLF-DQMKASIKPDHIAFVMVLSACSHGGLIAEGW 419
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+CF +M RDF P +HY CMVDLL RAGRL EA F+E MPI PD ++GA L C +
Sbjct: 420 ECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACRI 479
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+S + E + + L + Y+L+SN+YAS G+ + +R LMK RG+ K+ G +
Sbjct: 480 HSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTVGHT 539
Query: 673 LVDL 676
++++
Sbjct: 540 IIEI 543
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 230/474 (48%), Gaps = 23/474 (4%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
C+ L+ C + +LK+ HA ++ L C T L++ Y S G + +A ++F + + +
Sbjct: 7 CIALIKQCVTLEALKSLHASILKSHLHPHLC-TSLIAQYASLGSISHAYALFSTSHSSNV 65
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
+ + +IR + ++ + Y M + + NF F +LKAC L D + G + H
Sbjct: 66 FLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAH 125
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
+V G D FV L+ MY + SRQVF+ ++NVVSW+SM+ Y N +EG
Sbjct: 126 VVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEG 185
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
L+LF RM EG GS+V A A + H+ ++ G++ + + A + M
Sbjct: 186 LLLFWRM---LNEGIAPNRGSIVNAMACIHREHEADDFCRVVIDNGLDSDQSVQNAAMGM 242
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y +CG I AR F + DLV+WT+MI Y Q+ P AL+LF K P+ VT+
Sbjct: 243 YARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDSVTL 302
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSE 409
S++ A + L + + R VH + R +++ ++ A++D+Y KC + AR F+ S
Sbjct: 303 LSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDRMSA 362
Query: 410 KDVIAWNSIISG----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLH 453
+++I+W+++ISG + ++ PD + V V+SAC+ G + G
Sbjct: 363 RNLISWSTMISGYGMHGHGREALCLFDQMKASIKPDHIAFVMVLSACSHGGLIAEGWECF 422
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ ++ +++ + G A+ + M + W A++G
Sbjct: 423 KAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGA 476
>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 803
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/618 (29%), Positives = 330/618 (53%), Gaps = 26/618 (4%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
ND T+ + + G ++ A +FD M D + + VMI+ + LY + ++ Y M
Sbjct: 59 NDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMV 118
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+ D+F + V+K+ + ++EG K+H ++K+ D +V L+ +Y K
Sbjct: 119 FSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSW 178
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+ +VF+E ++++VSW SMI+GY+ + L+LF M + + ++ + S + AC+
Sbjct: 179 DAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACS 238
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ + + GK LH + ++ IE +V T++LDMY K G + A +F + ++V+W
Sbjct: 239 HVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWN 298
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+I Y ++ A F + P+ +T+ ++L A A L GR +H +R
Sbjct: 299 VLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMR 354
Query: 376 LGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
G + V++ AL+DMY + + A IF+ +EK++I+WNSII+
Sbjct: 355 RGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALEL 414
Query: 423 -----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
D ++ PD+ T+ S++ A A ++ G +HAY K SN + +L++ YA
Sbjct: 415 FQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRY-GSNTIILNSLVHMYA 473
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
CGD + AR F+ + K+ V+W+++I Y + G G S+ LFS+M+ +V PN+ F +
Sbjct: 474 MCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFAS 533
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+L+ACS +GMV EGW+ F SM R++ P ++HY M+DL+ R G A F+ MP
Sbjct: 534 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFL 593
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
P ++G+ L+ ++ + E +++ ++ D YVL+ N+YA RW VN+++
Sbjct: 594 PTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIK 653
Query: 658 ELMKQRGLSKSPGCSLVD 675
LM+ +G+S++ S V+
Sbjct: 654 LLMESKGISRTSSRSTVE 671
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 178/369 (48%), Gaps = 31/369 (8%)
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K+ ++N +T L + G + DA +FDE+ D W MI G+T G +AL+
Sbjct: 53 KVTKQLNDPALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQ 112
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYA 392
L+ ++ + T V+ + + +L G+ +H++ I+L + D V N+L+ +Y
Sbjct: 113 LYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYM 172
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISG---LDD--------------NVSPDAVTLVS 435
K DA +FE E+D+++WNS+ISG L+D PD + +S
Sbjct: 173 KLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMS 232
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ AC+ + + +G LH ++ + + + +V V T++L+ Y+K G+ A +F + ++
Sbjct: 233 ALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQR 292
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKC 554
N V W+ +IG Y + F M + +QP+ + +L AC+ + EG
Sbjct: 293 NIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACA----ILEGRTI 348
Query: 555 F-YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV----SLFGAFLHG 609
Y+M R F+P + ++D+ G+L+ A E + + E ++ S+ A++
Sbjct: 349 HGYAMRRG--FLPHIVLDTALIDMYGEWGQLKSA-EVIFDRIAEKNLISWNSIIAAYVQN 405
Query: 610 CGLYSRFDL 618
YS +L
Sbjct: 406 GKNYSALEL 414
>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
Length = 742
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/619 (29%), Positives = 320/619 (51%), Gaps = 35/619 (5%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MY A++ FD++ + YS+ ++ + ++ K+ + + MR+ D
Sbjct: 1 MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDE-T 206
F L +C + + +G+++H +V D V L++MY KC + +++VF +
Sbjct: 61 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+NV+SW+ M + + E L F M ++ + + ++++AC+ + G+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI--DLVSWTAMIVGYTQ 324
+H I G E + A++ MY +CG + +AR VFD + D+VSW M+ Y
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI 384
+ A++L+ + P+ VT S+LSA + ++ +GR++H + LE ++
Sbjct: 241 NDRGKDAIQLYQRMQ---LRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIV 297
Query: 385 -NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------------------- 420
NALV MYAKC +AR +F+ ++ +I+W +IIS
Sbjct: 298 GNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEK 357
Query: 421 -GLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
G V PDA+ V++++ACA + A++ G + + GL SS+ VGTA++N Y KC
Sbjct: 358 NGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGL-SSDKAVGTAVVNLYGKC 416
Query: 480 GDAQSARMVFDAMREKNTVT-WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
G+ + AR +FDA+ + V W+AMI Y G +L LF M E V+P+ F +I
Sbjct: 417 GEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSI 476
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
L ACSHTG+ +G F SM +++ V +++H+ C+ DLL R GRL+EA EF+E +P++
Sbjct: 477 LLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVK 536
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
PD + + L C + + + K+L L P A YV +SN+YA +W V +VR
Sbjct: 537 PDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVR 596
Query: 658 ELMKQRGLSKSPGCSLVDL 676
+ M ++G+ K G S +++
Sbjct: 597 KFMAEQGVKKERGVSTIEI 615
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 28/391 (7%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ +L C S + + H+ + + G ++ +++MYG G V+ AR VFD+M
Sbjct: 164 VTILSACSSPALVQDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDE 223
Query: 109 P--DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
D S+ +M+ Y ND KD ++ Y+ M+ R D + +L AC D+ G
Sbjct: 224 ALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLR---PDKVTYVSLLSACSSAEDVGLGR 280
Query: 167 KVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+H +IV + ++ LV MYAKC +R VFD+ ++++SWT++I+ YV+
Sbjct: 281 VLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRR 340
Query: 226 CAQEGLVLFNRMRE-------GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
E LF +M E V+ + + +++ ACA + AL QGK + G+
Sbjct: 341 LVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLS 400
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMIVGYTQSGYPDKALKLFTD 337
+ + TA++++Y KCG I +AR +FD +CS D+ W AMI Y Q G +ALKLF
Sbjct: 401 SDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWR 460
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINAL------VDMY 391
+ P+ + S+L A + G + G+ S + E V + D+
Sbjct: 461 MEMEGVRPDSFSFVSILLACSHTGLEDQGK---SYFTSMTTEYRNVTRTIQHFGCVADLL 517
Query: 392 AKCHVIADARYIFETTSEK-DVIAWNSIISG 421
+ + +A E K D +AW S+++
Sbjct: 518 GRGGRLKEAEEFLEKLPVKPDAVAWTSLLAA 548
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 187/613 (30%), Positives = 311/613 (50%), Gaps = 28/613 (4%)
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
MY + +AR +FD MP + SF +I Y Y+ +E + R+ + D F
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
++ L C E D+D G +H +V G F++ L+DMY+KC + + +FD
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA---KLRALHQ 264
+++ VSW S+I+GYV+ A+E L L +M + LGS++ AC + +
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G +H Y K+G+E + + TALLDMY K G++++A +F + S ++V++ AMI G+ Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 325 -----SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
+A KLF D + P+ T + VL A + L GR +H+L + +
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII----------SGLD----- 423
D + +AL+++YA D F +TS++D+ +W S+I S D
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Query: 424 --DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
++ P+ T+ ++SACA A+ G + Y+ K G+ + V T+ ++ YAK G+
Sbjct: 451 FSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGI-DAFTSVKTSSISMYAKSGN 509
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A VF ++ + T+SAMI G +L +F M ++PN+ F +L A
Sbjct: 510 MPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIA 569
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C H G+V +G K F M D++ P+ KH+ C+VDLL R GRL +A + + +
Sbjct: 570 CCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPV 629
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
+ A L C +Y +G+ + ++++EL P+ + YVL+ N+Y G +VRELM+
Sbjct: 630 TWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMR 689
Query: 662 QRGLSKSPGCSLV 674
RG+ K P S +
Sbjct: 690 DRGVKKEPALSWI 702
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 192/369 (52%), Gaps = 38/369 (10%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L AK ++ GK HG+++K + +L+ LL+MY KC + AR +FD + +
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHS 371
++S+ ++I GYTQ G+ ++A++LF + + A+ + T A L + +L++G ++H
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHG 172
Query: 372 LGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-------- 422
L + GL + +IN L+DMY+KC + A +F+ E+D ++WNS+ISG
Sbjct: 173 LVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 423 ---------DDNVSPDAVTLVSVISACA---SLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
D ++ L SV+ AC + G ++ G ++H Y+ K G + ++ V T
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLG-MEFDIVVRT 291
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGD------GGGSLALFSDML 524
ALL+ YAK G + A +F M KN VT++AMI G+ +Q D + LF DM
Sbjct: 292 ALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF-LQMDEITDEASSEAFKLFMDMQ 350
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF----KFVPSMKHYVCMVDLLAR 580
++P+ F+ +L ACS + G + +C++ +F+ S +++L A
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGS-----ALIELYAL 405
Query: 581 AGRLEEALE 589
G E+ ++
Sbjct: 406 MGSTEDGMQ 414
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 167/349 (47%), Gaps = 15/349 (4%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD-----IVEFYKCMR 138
T L+ MY G +K A +F MP+ + ++ MI + D D + + M+
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+R E FS VLKAC + ++ G ++H I K D F+ + L+++YA
Sbjct: 351 RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTE 410
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
Q F T +++ SWTSMI +VQN+ + LF ++ + + T+ +++ACA
Sbjct: 411 DGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
AL G+ + GY +K GI+ + + T+ + MY K GN+ A VF E+ + D+ +++A
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR-----MVHSL 372
MI Q G ++AL +F K PN VL A G + G M +
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDY 590
Query: 373 GIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKD-VIAWNSIIS 420
I + +T LVD+ + ++DA + ++ +D + W +++S
Sbjct: 591 RINPNEKHFT---CLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 67/150 (44%), Gaps = 7/150 (4%)
Query: 74 VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEF 133
+D T+ K T +SMY G++ A VF + NPD ++ MI + + +
Sbjct: 490 IDAFTSVK--TSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNI 547
Query: 134 YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMY 190
++ M+ + + F VL ACC + +G+K + + +K P+ T LVD+
Sbjct: 548 FESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK-YFQCMKNDYRINPNEKHFTCLVDLL 606
Query: 191 AKCRDIGSSRQ-VFDETLDKNVVSWTSMIA 219
+ + + + + V+W ++++
Sbjct: 607 GRTGRLSDAENLILSSGFQDHPVTWRALLS 636
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 182/613 (29%), Positives = 321/613 (52%), Gaps = 33/613 (5%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKV 152
G AR + D MP + SF ++I Y ++ +E F R + D F ++
Sbjct: 61 GDTHQARRLLDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAA 120
Query: 153 LKACCELRDIDEGMKVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNV 211
L AC + EG VH V G + FV LV MYA+C D+G +R+VFD T +++
Sbjct: 121 LAACSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDD 180
Query: 212 VSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA----KLRALHQGKW 267
VSW S+++GY++ +E L +F MR + N LGS++ C+ +R + +
Sbjct: 181 VSWNSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEA-- 238
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+HG ++K G++ + L +A++DMY K G + +A ++F + ++V + AMI G +
Sbjct: 239 VHGCVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEA 298
Query: 328 P------DKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
+AL L+++ + P T +SV+ A G++ G+ +H ++ + D
Sbjct: 299 AVHKEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGD 358
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
+ +AL+D+Y + D F + ++DV+ W ++ISG N
Sbjct: 359 DFIGSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLG 418
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ PD T+ SV++ACASL V+ G + ++TK G +G + ++ YA+ G+ +
Sbjct: 419 VGLKPDPFTISSVMNACASLAVVRTGEQMQCFATKSGF-DRFTAMGNSCIHMYARSGNVE 477
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+A F M + V+WSA+I + G +L F++M+ +V PNE+ F +L+ACS
Sbjct: 478 AAIQRFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACS 537
Query: 544 HTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
H G+V EG + + M ++ P++KH C+VDLL RAGRL +A F+ + + ++
Sbjct: 538 HGGLVDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVW 597
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
+ L C ++ + G+++ +++EL P + YV + N+Y G +++R+LMK+R
Sbjct: 598 QSLLGSCRIHRDMERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKER 657
Query: 664 GLSKSPGCSLVDL 676
G+ K PG S ++L
Sbjct: 658 GVKKEPGLSWIEL 670
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 228/488 (46%), Gaps = 36/488 (7%)
Query: 59 CKSTGSLK---AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C G LK HAL +++GL + LVSMY G + AR VFD D S+
Sbjct: 124 CSRAGRLKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSW 183
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACC----ELRDIDEGMKVHC 170
++ Y +++++ + MR+ ++F V+K C +R I E VH
Sbjct: 184 NSLVSGYLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEA--VHG 241
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA-- 227
+VK G D F+ + +VDMYAK + + +F LD NVV + +MIAG +++ A
Sbjct: 242 CVVKAGLDTDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVH 301
Query: 228 ----QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+E L L++ ++ +E + T S++ AC + GK +HG +LK + + +
Sbjct: 302 KEVVREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFI 361
Query: 284 VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
+AL+D+Y + D F + D+V+WTAMI G Q+ ++AL LF +
Sbjct: 362 GSALIDLYFNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGL 421
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARY 402
P+ TI+SV++A A L + G + + G + +T + N+ + MYA+ + A
Sbjct: 422 KPDPFTISSVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQ 481
Query: 403 IFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
F+ DV++W++IIS + V P+ +T + V++AC+ G
Sbjct: 482 RFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGL 541
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD-AQSARMVFDAMREKNTVTWSAMI 504
V G + + L V T +++ + G A + + D++ V W +++
Sbjct: 542 VDEGLRYYEIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLL 601
Query: 505 GGYGMQGD 512
G + D
Sbjct: 602 GSCRIHRD 609
>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
Length = 917
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 187/614 (30%), Positives = 321/614 (52%), Gaps = 30/614 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV+ Y FG + A+ VF S N + S+ MI+ N+ + + + MR + D
Sbjct: 308 LVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLE-NQPD 366
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG--GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
++ C + + EG +H +++ G + + L+D+Y KC + ++ +F
Sbjct: 367 VATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLF 426
Query: 204 DETLDKNVVSWTSMIAGYVQ-NDCAQEGLVLFNRMREGFVEGNQITLGSL---VTACAKL 259
++++SW +MI+GY + +E ++F + EG+ +L ++ + +C+
Sbjct: 427 MTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGL---LSEGSSCSLATMLAVIPSCSIP 483
Query: 260 RALHQGKWLHGYILKIGIEINS-HLVTALLDMYVKCGNIRDARSVFDELCSI-DLVSWTA 317
L GK LH + LK G + V AL+ MY+ CG+ A S+ + + + D++SW
Sbjct: 484 EELSFGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNT 543
Query: 318 MIVGYTQSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR- 375
+IVG Q+ AL++F + P+ +TI SVLSA L L +G+ +H + ++
Sbjct: 544 VIVGCLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKH 603
Query: 376 LGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
L + V N+L+ MY + A +F + + ++ +WN +ISG N
Sbjct: 604 LFASNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFY 663
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
P+ +++V +I AC LG + G S+H + + +L +NV++ +L++ Y KCG
Sbjct: 664 QKMEDFEPNEISVVGIICACTQLGGYRQGKSIHGHVFRS-VLHNNVFISASLVDMYCKCG 722
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
A VF+A EK+ W+++I +G G G S+ LF M + ++ + F +LS
Sbjct: 723 RLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLS 782
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSH+G+V EGWK + M F P+ +H+VC+VD+L RAGRL+EA +F+E++P +
Sbjct: 783 ACSHSGLVDEGWKYYCLMSEKFGITPAPEHHVCIVDMLGRAGRLQEAHKFVESLPSQQTH 842
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
++GA L+ C S +GE + K +L L P + YYV +NLYA W V QVR ++
Sbjct: 843 GIWGALLNACSSRSELKMGESIAKHLLHLEPGNSGYYVTAANLYAYKDMWSGVAQVRSVL 902
Query: 661 KQRGLSKSPGCSLV 674
+ +GL K G S V
Sbjct: 903 QDKGLVKPHGRSTV 916
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 172/565 (30%), Positives = 277/565 (49%), Gaps = 46/565 (8%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV MY G + A VF SMP D S+ +I N L + +++ M + + D
Sbjct: 204 LVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREMSCSIFQPD 263
Query: 146 NFVFSKVLKACCELRDI-DEGMKVHCEIVKVGGPDSF---VLTGLVDMYAKCRDIGSSRQ 201
S VL AC L D+ G VH VK+G D+ V LV Y++ ++++
Sbjct: 264 EVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYSEFGMPEAAKK 323
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLR 260
VF L++N+VSW +MI G VQN+ E L + +MR E + + TL ++V+ CA
Sbjct: 324 VFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN--QPDVATLVTIVSGCADQG 381
Query: 261 ALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L +G+ LHGY+++ G + + +LLD+Y+KC +A +F + DL+SW MI
Sbjct: 382 LLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLISWNTMI 441
Query: 320 VGYTQSG-YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL 378
GY++ G ++A +F + T+ +V+ + + L+ G+ +HS ++ G
Sbjct: 442 SGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEELSFGKALHSFSLKCGF 501
Query: 379 EDYTV--INALVDMYAKC-HVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
V +NAL+ MY C +A I D+I+WN++I G N
Sbjct: 502 TSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIVGCLQNELHKDALEIF 561
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
++PD++T+VSV+SAC L + +G S+H K L +SN+ V +LL Y
Sbjct: 562 RFMYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKH-LFASNLRVKNSLLTMYF 620
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
+ GD +SA +VF +M + N +W+ MI G+ G +L + M E+ +PNE+
Sbjct: 621 RFGDTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFYQKM--EDFEPNEISVVG 678
Query: 538 ILSACSHTGMVGEG----WKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFME- 592
I+ AC+ G +G F S+ + F+ + +VD+ + GRL+ A+ E
Sbjct: 679 IICACTQLGGYRQGKSIHGHVFRSVLHNNVFISA-----SLVDMYCKCGRLDIAVRVFEA 733
Query: 593 --NMPIEPDVSLFGAF-LHGCGLYS 614
I SL AF HG G+ S
Sbjct: 734 SAEKSIAGWNSLISAFGFHGHGMKS 758
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 233/488 (47%), Gaps = 29/488 (5%)
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK--VGGPDSFVLT 184
Y D ++ M + L E D+ +L ++ GM++H K +G
Sbjct: 143 YDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELHGMAAKSCLGAHCLGAWN 202
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
LVDMYAKC + S+ VF ++ SW S+I+G + N A+ F M +
Sbjct: 203 ALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSACYFREMSCSIFQP 262
Query: 245 NQITLGSLVTACAKLRALHQ-GKWLHGYILKIGIE--INSHLVTALLDMYVKCGNIRDAR 301
++++L S+++AC++L L G+ +H +K+G E + + +L+ Y + G A+
Sbjct: 263 DEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLVTFYSEFGMPEAAK 322
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF + +LVSW AMI G Q+ +AL + + + P+ T+ +++S A G
Sbjct: 323 KVFASNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLEN-QPDVATLVTIVSGCADQG 381
Query: 362 NLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
L+ G +H IR GL E+ ++ N+L+D+Y KC ++A +F T +D+I+WN++I
Sbjct: 382 LLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLISWNTMI 441
Query: 420 SG------------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
SG L + S T+++VI +C+ + G +LH++S K G
Sbjct: 442 SGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEELSFGKALHSFSLKCGF 501
Query: 462 LSSNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALF 520
SS V AL++ Y CGD +A ++ + + ++W+ +I G +L +F
Sbjct: 502 TSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIVGCLQNELHKDALEIF 561
Query: 521 SDM-LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
M + + P+ + ++LSAC ++ G K + M F +++ ++ +
Sbjct: 562 RFMYCSLAINPDSITIVSVLSACGDLNLLALG-KSIHCMILKHLFASNLRVKNSLLTMYF 620
Query: 580 RAGRLEEA 587
R G A
Sbjct: 621 RFGDTRSA 628
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 181/365 (49%), Gaps = 26/365 (7%)
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F E + +V+ W + + + + LF RM E + T+ +++ ++ L
Sbjct: 119 FREAVAPDVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNL 178
Query: 263 HQGKWLHGYILKIGIEINSHLV---TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
+G LHG K + +H + AL+DMY KCG R A VF + D SW ++I
Sbjct: 179 RRGMELHGMAAKSCL--GAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVI 236
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL-NMGRMVHSLGIRLGL 378
G +G + + F + + F P+ V+++SVLSA ++L +L + G VHS ++LG
Sbjct: 237 SGSIFNGLAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGY 296
Query: 379 EDY---TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV--------- 426
ED +V N+LV Y++ + A+ +F + +++++WN++I GL N
Sbjct: 297 EDTASCSVANSLVTFYSEFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAVL 356
Query: 427 -------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
PD TLV+++S CA G + G +LH Y ++GLL +G +LL+ Y KC
Sbjct: 357 RQMRLENQPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKC 416
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL-FSDMLNEEVQPNEVIFTTI 538
+ +A ++F M ++ ++W+ MI GY G L F +L+E + +
Sbjct: 417 DEPSNAGLLFMTMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAV 476
Query: 539 LSACS 543
+ +CS
Sbjct: 477 IPSCS 481
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 124/260 (47%), Gaps = 11/260 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
LNLL L KS + H +N + L++MY FG + A VF SM + +
Sbjct: 587 LNLLALGKSIHCMILKHLFA-----SNLRVKNSLLTMYFRFGDTRSAELVFYSMGDTNLC 641
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
S+ MI + N+ ++FY+ M E + ++ AC +L +G +H +
Sbjct: 642 SWNCMISGFAQNNKGWRALQFYQKMEDF--EPNEISVVGIICACTQLGGYRQGKSIHGHV 699
Query: 173 VK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+ V + F+ LVDMY KC + + +VF+ + +K++ W S+I+ + + + +
Sbjct: 700 FRSVLHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIAGWNSLISAFGFHGHGMKSI 759
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL--KIGIEINSHLVTALLD 289
LF +M + ++ + T +L++AC+ + +G W + ++ K GI ++D
Sbjct: 760 DLFWKMHDSGMKATKSTFIALLSACSHSGLVDEG-WKYYCLMSEKFGITPAPEHHVCIVD 818
Query: 290 MYVKCGNIRDARSVFDELCS 309
M + G +++A + L S
Sbjct: 819 MLGRAGRLQEAHKFVESLPS 838
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 123/289 (42%), Gaps = 63/289 (21%)
Query: 404 FETTSEKDVIAWNSIISGL------DDNVSP-----------DAVTLVSVISACASLGAV 446
F DVI WN+ + L DD + D+ T+V ++S + G +
Sbjct: 119 FREAVAPDVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNL 178
Query: 447 QVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
+ G LH + K L + + AL++ YAKCG+ +SA +VF +M ++T +W+++I G
Sbjct: 179 RRGMELHGMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISG 238
Query: 507 YGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS------------HTGMVGEGWK- 553
G S F +M QP+EV +++LSACS H+ V G++
Sbjct: 239 SIFNGLAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYED 298
Query: 554 -----------CFYSMCRDFKFVPSMKH------------YVCMVDLLARAGRLEEALEF 590
FYS +F + K + M+ L + R+ EAL
Sbjct: 299 TASCSVANSLVTFYS---EFGMPEAAKKVFASNLNRNLVSWNAMIKGLVQNERVTEALAV 355
Query: 591 MENMPIE--PDVSLFGAFLHGC---GLYSRFDL--GEVMIKKMLELHPD 632
+ M +E PDV+ + GC GL S + G V+ K +L P
Sbjct: 356 LRQMRLENQPDVATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPS 404
>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Cucumis sativus]
Length = 747
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 202/681 (29%), Positives = 354/681 (51%), Gaps = 32/681 (4%)
Query: 25 SYT-NQQTPTQ--HELDQTFASFHSLPSIPCLNLLGLCKSTGSL--KAFHALLIVDGL-T 78
SY+ N Q Q HE+ + A +P ++L C +T A H LI G +
Sbjct: 23 SYSGNWQEALQLYHEIRISGAQLSDTWVLP--SILKACSNTSFNLGTAMHGCLIKQGCQS 80
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN-DLYKDIVEFYKCM 137
+ + Y +G + A+ FDS N D S+ VM+ F N + + F K
Sbjct: 81 STSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGR 140
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDI 196
+ + + + V++A EL+ +G H I + G V L+ +YA+
Sbjct: 141 FAHFQPNISSLL-LVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMY 199
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF-NRMREGFVEGNQITLGSLVTA 255
+ + + ++ +VVSW+ MI G+VQ ++G ++F N + E + + +T+ S++ A
Sbjct: 200 FAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKA 259
Query: 256 CAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW 315
C L+ + G +HG ++ G+E + + +L+DMY KC N+ A F E+ +++SW
Sbjct: 260 CTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISW 319
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
M+ Y + +AL L + VT+A+VL + + R VH + IR
Sbjct: 320 NLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIR 379
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------------- 421
G E + ++N+++D YAKC+++ AR +F+ ++KDV+AW+++I+G
Sbjct: 380 KGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISV 439
Query: 422 ---LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+++ V P+ V++++++ ACA ++ H + ++GL +S V +GT++++ Y+K
Sbjct: 440 FKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGL-ASEVDIGTSIIDMYSK 498
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CGD +++ F+ + +KN V WSAMI + + G +L LF + +PN V ++
Sbjct: 499 CGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSL 558
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP--I 596
LSACSH G++ EG F SM + P ++HY C+VD+L+RAG+ EALE +E +P +
Sbjct: 559 LSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEM 618
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
E S++G L C Y LG ++L+L P + Y+L SNLYA+ G I ++
Sbjct: 619 EAGASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKM 678
Query: 657 RELMKQRGLSKSPGCSLVDLD 677
R L K++G+ G SLV ++
Sbjct: 679 RRLAKEKGVKVVAGYSLVHIN 699
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 306 bits (783), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 296/547 (54%), Gaps = 52/547 (9%)
Query: 178 PDSFVL------TGLV--DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
P+ F+ T LV ++Y C IG+S + ET+D + + I + + +
Sbjct: 28 PNGFIFFRPSSKTPLVSSNLYHSCATIGTS-VLPSETIDCKITDYNIEICRFCELGNLRR 86
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
+ L N+ + +E T S++ CA L+++ G+ +H I +E++ L + L+
Sbjct: 87 AMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVF 144
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG------------------YPDKA 331
MYV CG++R+ R +FD++ + + W ++ GY + G + A
Sbjct: 145 MYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESA 204
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-----DYTVINA 386
KLF + D + I+ +S L++ + LGI L + T+ N
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNC 264
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPD 429
L+DMY+K + A +FET E+ V++W S+I+G +++ P+
Sbjct: 265 LLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPN 324
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
++T+ ++ ACASL A++ G +H + + G S + +V AL++ Y KCG AR++F
Sbjct: 325 SITMACILPACASLAALERGQEIHGHILRNG-FSLDRHVANALVDMYLKCGALGLARLLF 383
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D + EK+ V+W+ MI GYGM G G ++A F++M N ++P+EV F +IL ACSH+G++
Sbjct: 384 DMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLD 443
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EGW F M + P +HY C+VDLLARAG L +A +F++ MPIEPD +++GA L G
Sbjct: 444 EGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 503
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C +Y L E + + + EL P+ YYVL++N+YA +W V ++RE + +RGL K+P
Sbjct: 504 CRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNP 563
Query: 670 GCSLVDL 676
GCS +++
Sbjct: 564 GCSWIEI 570
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 189/406 (46%), Gaps = 52/406 (12%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEI----VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVF 203
+ VL+ C +L+ I +G ++H I V+V D + + LV MY C D+ R++F
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEV---DGVLGSKLVFMYVTCGDLREGRRIF 159
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV--------------EGNQITL 249
D+ ++ V W ++ GY + +E L LF RMRE + + + I+
Sbjct: 160 DKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISW 219
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT----------ALLDMYVKCGNIRD 299
S+++ +G L +L +GI N+ L T LLDMY K GN+
Sbjct: 220 NSMISGYVSNGLSEKGLDLFEQMLLLGI--NTDLATMVSVELTLNNCLLDMYSKSGNLNS 277
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
A VF+ + +VSWT+MI GY + G D +++LF + + D FPN +T+A +L A A
Sbjct: 278 AIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACAS 337
Query: 360 LGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L L G+ +H +R G D V NALVDMY KC + AR +F+ EKD+++W +
Sbjct: 338 LAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVM 397
Query: 419 ISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
I+G + + PD V+ +S++ AC+ G + G
Sbjct: 398 IAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCC 457
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNTVTWSAMIGG 506
+ +++ A+ G+ A M E + W A++ G
Sbjct: 458 IEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 503
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 128/271 (47%), Gaps = 17/271 (6%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L+ MY G++ A VF++M S+ MI Y L V + M K
Sbjct: 262 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDL 321
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
++ + +L AC L ++ G ++H I++ G D V LVDMY KC +G +R
Sbjct: 322 FPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARL 381
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+FD +K++VSWT MIAGY + E + FN MR +E ++++ S++ AC+
Sbjct: 382 LFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGL 441
Query: 262 LHQGKWLHGYILKIG--IEINSHLVTALLDMYVKCGNIRDARSVFDELCSI--DLVSWTA 317
L +G W +++ IE S ++D+ + GN+ A F ++ I D W A
Sbjct: 442 LDEG-WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYK-FIKMMPIEPDATIWGA 499
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
++ G +++ D K A+ HV
Sbjct: 500 LLCG----------CRIYHDVKLAEKVAEHV 520
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 15/183 (8%)
Query: 49 SIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFD 104
SI +L C S +L + H ++ +G + D+ LV MY G + AR +FD
Sbjct: 325 SITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFD 384
Query: 105 SMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDE 164
+P D S+ VMI Y ++ + + + MR E D F +L AC +DE
Sbjct: 385 MIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDE 444
Query: 165 G------MKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFD-ETLDKNVVSWTSM 217
G M+ +C I P S +VD+ A+ ++ + + ++ + W ++
Sbjct: 445 GWGFFNMMRNNCCI----EPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGAL 500
Query: 218 IAG 220
+ G
Sbjct: 501 LCG 503
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 163/435 (37%), Positives = 246/435 (56%), Gaps = 19/435 (4%)
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
R L Q + +H I G N + LL MYV+ G + DA+ +FD + SW+ ++
Sbjct: 64 RNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIV 123
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY + G +F + + + + V+ A L +L GR++H + ++ GL+
Sbjct: 124 GGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLD 183
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------------- 422
+ V LVDMYA+C V+ DA IF ++D+ W +I L
Sbjct: 184 YGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRM 243
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
+ + PD V LV+V+ ACA LGA+ ++HAY G S +V +GTA+++ YAKCG
Sbjct: 244 RNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGY-SLDVILGTAMIDMYAKCGS 302
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+SAR +FD M+ +N +TWSAMI YG G G +L LF ML + PN + F ++L A
Sbjct: 303 VESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYA 362
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
CSH G++ EG + F SM ++ P +KHY CMVDLL RAGRL+EALE +E MP+E D
Sbjct: 363 CSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEV 422
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
L+GA L C ++ DL E + + +L+L K +YVL+SN+YA+ G+W + + R+LM
Sbjct: 423 LWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMT 482
Query: 662 QRGLSKSPGCSLVDL 676
+ GL K PG + +++
Sbjct: 483 KGGLRKIPGRTWIEV 497
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 196/377 (51%), Gaps = 23/377 (6%)
Query: 59 CKSTGSLKAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVM 117
C++ ++ HA + +G N KL+ MY G ++ A+ +FD M YS+ V+
Sbjct: 63 CRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVI 122
Query: 118 IRWYFLNDLYKDIVEFYKCM---RKRLKEH---DNFVFSKVLKACCELRDIDEGMKVHCE 171
+ Y + F+ C R+ L+ D++ V++AC +L+D+ G +HC
Sbjct: 123 V------GGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCI 176
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG 230
+K G FV LVDMYA+C+ + + Q+F + +++ +WT MI ++ E
Sbjct: 177 TLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVES 236
Query: 231 LVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
LV F+RMR + +++ L ++V ACAKL A+++ K +H YI G ++ L TA++DM
Sbjct: 237 LVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDM 296
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KCG++ AR +FD + ++++W+AMI Y G +KAL+LF + PN +T
Sbjct: 297 YAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITF 356
Query: 351 ASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFE 405
S+L A + G + G+ M G+ ++ YT +VD+ + + +A + E
Sbjct: 357 VSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYT---CMVDLLGRAGRLDEALEMIE 413
Query: 406 TTS-EKDVIAWNSIISG 421
EKD + W +++
Sbjct: 414 GMPVEKDEVLWGALLGA 430
>gi|4049345|emb|CAA22570.1| putative protein [Arabidopsis thaliana]
gi|7270147|emb|CAB79960.1| putative protein [Arabidopsis thaliana]
Length = 688
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 196/647 (30%), Positives = 325/647 (50%), Gaps = 36/647 (5%)
Query: 56 LGLCKSTGSLK---AFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L L G LK H G T+ C + ++ MY G A +F+++ +PD
Sbjct: 8 LALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDV 67
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCE 171
S+ ++ + N + + F M+ D F +S L C G+++
Sbjct: 68 VSWNTILSGFDDNQI---ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQST 124
Query: 172 IVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC-AQE 229
+VK G D V + MY++ +R+VFDE K+++SW S+++G Q E
Sbjct: 125 VVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFE 184
Query: 230 GLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+V+F + MREG VE + ++ S++T C L + +HG +K G E + L+
Sbjct: 185 AVVIFRDMMREG-VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 243
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
Y KCG + +SVF ++ ++VSWT MI S D A+ +F + ++ +PN V
Sbjct: 244 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEV 298
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETT 407
T +++A + G +H L I+ G + + +V N+ + +YAK + DA+ FE
Sbjct: 299 TFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDI 358
Query: 408 SEKDVIAWNSIISGLDDN----------------VSPDAVTLVSVISACASLGAVQV--G 449
+ +++I+WN++ISG N P+ T SV++A A + V G
Sbjct: 359 TFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQG 418
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
HA+ K GL S V V +ALL+ YAK G+ + VF+ M +KN W+++I Y
Sbjct: 419 QRCHAHLLKLGLNSCPV-VSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSS 477
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
GD + LF M+ E V P+ V F ++L+AC+ GMV +G++ F M + PS +
Sbjct: 478 HGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE 537
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVD+L RAGRL+EA E M +P P S+ + L C L+ +G + + +E+
Sbjct: 538 HYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEM 597
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P+ + YV + N+YA W + ++R+ M+++ +SK G S +D+
Sbjct: 598 KPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 644
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 170/484 (35%), Positives = 264/484 (54%), Gaps = 36/484 (7%)
Query: 226 CAQ-EGLVLFNRMRE-------------GFVEGNQITLGSLVTACAKLRALHQGKWLHGY 271
C Q E LVL NR RE GF G T +LV+AC LR++ K + Y
Sbjct: 84 CIQIEKLVLCNRYREAMELFEILELEHDGFDVGGS-TYDALVSACVGLRSIRGVKRVFNY 142
Query: 272 ILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKA 331
++ G E + +++ +L ++VKCG + DAR +FDE+ D+ SW MI G+ SG +A
Sbjct: 143 MVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEA 202
Query: 332 LKLFTDKKWADFFPNHV-TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVD 389
LF W +F T +++ ASA LG + +GR +HS ++ G+ D T ++ AL+D
Sbjct: 203 FGLFL-CMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALID 261
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVT 432
MY+KC I DA +F+ EK + WNSII+ D D T
Sbjct: 262 MYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFT 321
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ VI CA L +++ HA ++G +++ TAL++FY+K G + A VF+ M
Sbjct: 322 ISIVIRICARLASLEYAKQAHAALVRRGY-DTDIVANTALVDFYSKWGRMEDAWHVFNRM 380
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
R KN ++W+A+I GYG G G ++ +F ML E + PN V F +LSACS++G+ GW
Sbjct: 381 RRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGW 440
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ FYSM RD K P HY CMV+LL R G L+EA E + + P +P +++ L C +
Sbjct: 441 EIFYSMSRDHKVKPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRM 500
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+ +LG++ + + + P+K C Y+++ NLY S G+ V + +K++GL P C+
Sbjct: 501 HENLELGKLAAENLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACT 560
Query: 673 LVDL 676
+++
Sbjct: 561 WIEV 564
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 108/358 (30%), Positives = 186/358 (51%), Gaps = 27/358 (7%)
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF-----VFSKVLKACCELRDIDEGMKVHC 170
+ I L + Y++ +E ++ + EHD F + ++ AC LR I +V
Sbjct: 85 IQIEKLVLCNRYREAMELFEILEL---EHDGFDVGGSTYDALVSACVGLRSIRGVKRVFN 141
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
+V G PD +V+ ++ ++ KC + +R++FDE +K++ SW +MI G+V + E
Sbjct: 142 YMVNSGFEPDLYVMNRVLFVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSE 201
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
LF M E F +G T +++ A A L + G+ +H LK G+ ++ + AL+D
Sbjct: 202 AFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALID 261
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG+I DA VFD++ V W ++I Y GY ++AL + + + + +H T
Sbjct: 262 MYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFT 321
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTS 408
I+ V+ A+L +L + H+ +R G + V N ALVD Y+K + DA ++F
Sbjct: 322 ISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMR 381
Query: 409 EKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVG 449
K+VI+WN++I+G L + + P+ VT ++V+SAC+ G + G
Sbjct: 382 RKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERG 439
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 143/275 (52%), Gaps = 6/275 (2%)
Query: 93 FGHVKY-----ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF 147
F HVK AR +FD MP D S+ MI + + + + + CM + + +
Sbjct: 160 FVHVKCGLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSR 219
Query: 148 VFSKVLKACCELRDIDEGMKVH-CEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F+ +++A L + G ++H C + + G D+FV L+DMY+KC I + VFD+
Sbjct: 220 TFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQM 279
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+K V W S+IA Y + ++E L + MR+ + + T+ ++ CA+L +L K
Sbjct: 280 PEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAK 339
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
H +++ G + + TAL+D Y K G + DA VF+ + +++SW A+I GY G
Sbjct: 340 QAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHG 399
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
++A+++F PNHVT +VLSA + G
Sbjct: 400 QGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSG 434
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 152/350 (43%), Gaps = 41/350 (11%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H+ + G+ +D + L+ MY G ++ A VFD MP + +I Y L+
Sbjct: 238 RQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIASYALH 297
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVL 183
++ + FY MR + D+F S V++ C L ++ + H +V+ G D
Sbjct: 298 GYSEEALSFYYEMRDSGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVAN 357
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFV 242
T LVD Y+K + + VF+ KNV+SW ++IAGY + +E + +F +M REG +
Sbjct: 358 TALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMI 417
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N +T ++++AC+ L + W Y + H V Y
Sbjct: 418 P-NHVTFLAVLSACS-YSGLSERGWEIFYSMS-----RDHKVKPRAMHYA---------- 460
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
C ++L+ + G D+A +L A F P A++L+A N
Sbjct: 461 -----CMVELLG---------REGLLDEAYELIRS---APFKPTTNMWATLLTACRMHEN 503
Query: 363 LNMGRMVHSLGIRLGLEDYTVIN--ALVDMYAKCHVIADARYIFETTSEK 410
L +G++ G+E + N L+++Y + +A + +T K
Sbjct: 504 LELGKLAAE--NLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRK 551
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 181/551 (32%), Positives = 292/551 (52%), Gaps = 37/551 (6%)
Query: 147 FVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
+ +KV+ C + D G+++H I+++G + + + +VDMYAKC +I S+ +VF+E
Sbjct: 70 YFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNE 129
Query: 206 TLDKNVVSWTSMIAGY--VQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
++N V+W S+I GY V CA G+ F ++ + + C++L +
Sbjct: 130 MPERNDVTWNSLIFGYLNVMPTCAMRGVTSF-------------SVSTCLVVCSQLEVRN 176
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G +HG LK+G + N + TAL+DMY KC + D+ VFD + ++V+WTAM+ Y
Sbjct: 177 FGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYA 236
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
Q+ PD+A+ L + N+VT S+LS+ + + + VH IR GLE
Sbjct: 237 QNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLY 296
Query: 384 INA-LVDMYAKC-HVIADARYIFETTSEKDVIAWNSIISGLDD----------------- 424
I A LV +Y+KC + + D I D I+WN++I+G +
Sbjct: 297 IAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHA 356
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
N+ D T S++ A + A++ G +HA K G SS VYV L++ YA+CG
Sbjct: 357 NIKMDFYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASS-VYVQNGLVSMYARCGAIDD 415
Query: 485 ARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
++ VF M + + V+W+A++ G G G ++ LF M +++PN F +LSACSH
Sbjct: 416 SKRVFWLMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSH 475
Query: 545 TGMVGEGWKCFYSMCRDFKFVP-SMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLF 603
G V +G + F M D P ++HY +VD+ RAG L EA + MP++P S++
Sbjct: 476 VGSVDKGLEYFDFMRSDISLEPLRVEHYASVVDIFGRAGYLSEAEAIINCMPMDPGPSVY 535
Query: 604 GAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQR 663
A L C ++ ++ +K+LEL PD Y+L+SN+ A++G W VR+LM R
Sbjct: 536 KALLSACLVHGNREIAVRSARKLLELWPDDPATYILLSNMLATEGYWDDAADVRKLMCDR 595
Query: 664 GLSKSPGCSLV 674
G+ K+PG S +
Sbjct: 596 GVRKNPGYSWI 606
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/481 (27%), Positives = 230/481 (47%), Gaps = 47/481 (9%)
Query: 5 SLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASF------HSLPSIPCLN---- 54
S L ++ R KP L +Y P Q L Q + +F H L + N
Sbjct: 13 SQLWCNLQRAFKPTNHLLSRAYHIASNPEQDYLYQYYQTFDSDLFAHLLRNGSFSNPYFI 72
Query: 55 --LLGLCKSTGSLK---AFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
++ C S H+ +I G T N + +V MY ++ A VF+ MP
Sbjct: 73 NKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNEMPE 132
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ ++ +I Y LN + C + + +F S L C +L + G +V
Sbjct: 133 RNDVTWNSLIFGY-LNVM-------PTCAMRGVT---SFSVSTCLVVCSQLEVRNFGAQV 181
Query: 169 HCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +K+G ++ FV T L+DMY+KC + S +VFD +DKNVV+WT+M+ Y QN+
Sbjct: 182 HGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQP 241
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E ++L M ++ N +T SL+++ + + + K +H I++ G+E N ++ L
Sbjct: 242 DEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCGLECNLYIAATL 301
Query: 288 LDMYVKC-GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
+ +Y KC N+ D + + D +SW A+I GY+ G + ALK F + + A+ +
Sbjct: 302 VTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMD 361
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFE 405
T S+L A + GR +H+L ++ G + N LV MYA+C I D++ +F
Sbjct: 362 FYTFTSLLGAIGAFLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFW 421
Query: 406 TTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQV 448
+ DV++WN++++G + P++ T ++V+SAC+ +G+V
Sbjct: 422 LMEDHDVVSWNALLTGCAHHGFGNEAVELFEQMRKTKIKPNSTTFLAVLSACSHVGSVDK 481
Query: 449 G 449
G
Sbjct: 482 G 482
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 185/386 (47%), Gaps = 33/386 (8%)
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
N + +V+ CAK + G LH I+++G N H+ +A++DMY KC I+ A VF
Sbjct: 68 NPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVF 127
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+E+ + V+W ++I GY P A++ T ++++ L +QL N
Sbjct: 128 NEMPERNDVTWNSLIFGYLNV-MPTCAMRGVTS----------FSVSTCLVVCSQLEVRN 176
Query: 365 MGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
G VH L ++LG ++ + AL+DMY+KC + D+ +F+ +K+V+ W ++++
Sbjct: 177 FGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYA 236
Query: 424 DNVSPDA-----------------VTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N PD VT S++S+ + +Q +H + G L N+
Sbjct: 237 QNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPKYMQYCKQVHCSIIRCG-LECNL 295
Query: 467 YVGTALLNFYAKC-GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
Y+ L+ Y+KC + + + ++ + ++W+A+I GY G G +L F +M +
Sbjct: 296 YIAATLVTVYSKCTNNLEDFNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRH 355
Query: 526 EEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLE 585
++ + FT++L A + EG + +++ + S+ +V + AR G ++
Sbjct: 356 ANIKMDFYTFTSLLGAIGAFLAIEEG-REMHALIVKTGYASSVYVQNGLVSMYARCGAID 414
Query: 586 EALEFMENMPIEPDVSLFGAFLHGCG 611
++ M + DV + A L GC
Sbjct: 415 DSKRVFWLME-DHDVVSWNALLTGCA 439
Score = 115 bits (288), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 10/208 (4%)
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARY 402
F N I V+S A+ + ++G +HS IR+G + + +A+VDMYAKC I A
Sbjct: 66 FSNPYFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHE 125
Query: 403 IFETTSEKDVIAWNSIISGLDDNVSPD----AVTLVSV---ISACASLGAVQVGSSLHAY 455
+F E++ + WNS+I G NV P VT SV + C+ L G+ +H
Sbjct: 126 VFNEMPERNDVTWNSLIFGY-LNVMPTCAMRGVTSFSVSTCLVVCSQLEVRNFGAQVHGL 184
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
S K G +NV+VGTAL++ Y+KC + VFD M +KN VTW+AM+ Y
Sbjct: 185 SLKLG-FDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMVTAYAQNEQPDE 243
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACS 543
++ L +M+ ++ N V + ++LS+ S
Sbjct: 244 AMILVREMMRLGIKANYVTYNSLLSSFS 271
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 169/517 (32%), Positives = 262/517 (50%), Gaps = 54/517 (10%)
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
G D V L+DMY KC ++ + +VF+ +VSW +I G+ Q + + + +
Sbjct: 5 GSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSL 64
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M+E E N++T +L+ +C K R +
Sbjct: 65 MQEAGFEPNEVTYSNLLASCIKAR-----------------------------------D 89
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ AR++FD++ + +W ++ GY Q ++LF + + P+ T+A +LS+
Sbjct: 90 VHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSS 149
Query: 357 SAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
++LG L+ GR VHS +R L D V + LVDMY+KC I AR IF +E+DV+ W
Sbjct: 150 CSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCW 209
Query: 416 NSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
NSIISGL ++ + P + S+I++C+ L ++ G +HA K
Sbjct: 210 NSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMK 269
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
G NVYVG+AL++ YAKCG+ AR+ FD M KN V W+ MI GY G G ++
Sbjct: 270 DGY-DQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVE 328
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
LF ML E +P+ V F +L+ CSH+G+V + F SM + +P +HY C++D L
Sbjct: 329 LFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDAL 388
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
RAGR E + MP + D ++ L C ++ +LG+ + + + P YV
Sbjct: 389 GRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYV 448
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
L+SN+YAS GR + VR LM RG+ K G S +D
Sbjct: 449 LLSNIYASLGRHGDASAVRALMSNRGVVKGRGYSWID 485
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 206/400 (51%), Gaps = 17/400 (4%)
Query: 36 ELDQTFASFHSLPSIPCLN----LLGLCKSTGSLKAFHALLIVDGL---TNDKCNTKLVS 88
E+D+ F SLPS+ ++ + G + KA L ++ N+ + L++
Sbjct: 23 EMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLA 82
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
V AR++FD + P ++ ++ Y + ++D +E ++ M+ + + D
Sbjct: 83 SCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTT 142
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
+ +L +C +L +D G +VH V+ + D FV +GLVDMY+KC IG +R +F++
Sbjct: 143 LAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMT 202
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
+++VV W S+I+G + +E F +MRE + + + S++ +C++L ++ G+
Sbjct: 203 ERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQ 262
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
+H ++K G + N ++ +AL+DMY KCGN+ DAR FD + ++V+W MI GY Q+G
Sbjct: 263 IHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGL 322
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN-----MGRMVHSLGIRLGLEDYT 382
DKA++LF + P+ VT +VL+ + G ++ M +S GI E YT
Sbjct: 323 GDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYT 382
Query: 383 VINALVDMYAKCHVIADAR-YIFETTSEKDVIAWNSIISG 421
L+D + + I + + D I W +++
Sbjct: 383 ---CLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAA 419
Score = 141 bits (356), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 180/385 (46%), Gaps = 56/385 (14%)
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G + H+ +L+DMY KC + +A VF+ L S+ +VSW +I G+ Q G KA+++
Sbjct: 3 GFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVL 62
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCH 395
+ + A F PN VT +++L++ + R VHS
Sbjct: 63 SLMQEAGFEPNEVTYSNLLASCIK------ARDVHS------------------------ 92
Query: 396 VIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVIS 438
AR +F+ S V WN+++SG NV PD TL ++S
Sbjct: 93 ----ARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILS 148
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
+C+ LG + G +H+ S + LL ++++V + L++ Y+KCG AR +F+ M E++ V
Sbjct: 149 SCSKLGILDFGRQVHSASVR-FLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVV 207
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
W+++I G + + F M + P E + +++++CS + G + +
Sbjct: 208 CWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQV 267
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
+D + ++ ++D+ A+ G +++A F + M ++ ++ + +HG D
Sbjct: 268 MKD-GYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMK-NIVAWNEMIHGYAQNGLGDK 325
Query: 619 GEVMIKKML--ELHPDKACYYVLVS 641
+ + ML E PD + +++
Sbjct: 326 AVELFEYMLTTEQKPDAVTFIAVLT 350
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 188/554 (33%), Positives = 297/554 (53%), Gaps = 37/554 (6%)
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVD-MYAKCRDIGSSRQ 201
H + +LKAC + +++ VH I+ G D F++ + + + +
Sbjct: 27 HSAASITTLLKACKKREHLEQ---VHACIIHRGLEQDHFLVFLFISRAHTLLSTLSYASS 83
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF L + V W ++I + Q + L F RM+ + T S++ AC+
Sbjct: 84 VFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSGTCK 143
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+GK LHG + G++ + ++ T+L+DMY KCG I DAR VFD + ++VSWTAM+VG
Sbjct: 144 AREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVG 203
Query: 322 YTQSGYPDKALKLFTDKKWADFFP--NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
Y G +A KLF D P N + S+L ++G+L+ R G+ +
Sbjct: 204 YVAVGDVVEARKLF------DEMPHRNVASWNSMLQGFVKMGDLSGAR-----GVFDAMP 252
Query: 380 DYTVIN--ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
+ V++ ++D YAK +A AR++F+ + EKDV+AW+++ISG N
Sbjct: 253 EKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVFLE 312
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
V PD LVS++SA A LG +++ + +Y +K + +V ALL+ AKCG
Sbjct: 313 MELMNVKPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQQDHVIAALLDMNAKCG 372
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+ + A +FD ++ V + +MI G + G G ++ LF+ ML E + P+EV FT IL+
Sbjct: 373 NMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILT 432
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACS G+V EG F SM + + P HY CMVDLL+R+G + +A E ++ +P EP
Sbjct: 433 ACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHA 492
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
+GA L C LY +LGE++ ++ EL P A YVL+S++YA+ RWI V+ VR M
Sbjct: 493 GAWGALLGACKLYGDSELGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKM 552
Query: 661 KQRGLSKSPGCSLV 674
++R + K PG S +
Sbjct: 553 RERRVRKIPGSSKI 566
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 143/495 (28%), Positives = 235/495 (47%), Gaps = 39/495 (7%)
Query: 44 FHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGH-----VKY 98
HS SI LL CK L+ HA +I GL D LV ++ S H + Y
Sbjct: 26 LHSAASIT--TLLKACKKREHLEQVHACIIHRGLEQDHF---LVFLFISRAHTLLSTLSY 80
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A SVF + P + +I+ + +L+ + + M+ D+F + V+KAC
Sbjct: 81 ASSVFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSG 140
Query: 159 LRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSM 217
EG +H + G D +V T L+DMY KC +I +R+VFD D+NVVSWT+M
Sbjct: 141 TCKAREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAM 200
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
+ GYV E LF+ M N + S++ K+ L + +
Sbjct: 201 LVGYVAVGDVVEARKLFDEMP----HRNVASWNSMLQGFVKMGDLSGARG----VFDAMP 252
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
E N T ++D Y K G++ AR +FD D+V+W+A+I GY Q+G P++AL++F +
Sbjct: 253 EKNVVSFTTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVFLE 312
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL--GIRLGLEDYTVINALVDMYAKCH 395
+ + P+ + S++SASAQLG+L + + V S I + L+ VI AL+DM AKC
Sbjct: 313 MELMNVKPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQQDHVIAALLDMNAKCG 372
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVIS 438
+ A +F+ +DV+ + S+I GL + ++PD V +++
Sbjct: 373 NMERALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILT 432
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR-EKNT 497
AC+ G V G + ++ +S +++ ++ G + A + + E +
Sbjct: 433 ACSRAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHA 492
Query: 498 VTWSAMIGGYGMQGD 512
W A++G + GD
Sbjct: 493 GAWGALLGACKLYGD 507
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 261/468 (55%), Gaps = 21/468 (4%)
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ L L+ +M N T + +CA L G HG I K+G + T L+
Sbjct: 32 QALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLI 91
Query: 289 DMYVKCGNIRDARSVFDE-LCSIDL-VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
MY K + +AR VF+E S L V + A++ GY + +A+ LF N
Sbjct: 92 SMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVN 151
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFE 405
VT+ ++ A NL +G +H ++ G + D +V+N + MY KC + A+ +F+
Sbjct: 152 SVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFD 211
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
K +I+WN+++SG N V PD VTLV V+S+CA+LGA V
Sbjct: 212 EMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSV 271
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G + + + +SN ++ AL+N YA+CG+ A+ VFD M E+ V+W+A+IGGYG
Sbjct: 272 GHEVE-FKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG 330
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
M G G ++ LF +M+ ++P+ F +LSACSH G+ +G + F M R+++ P
Sbjct: 331 MHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGP 390
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HY CMVDLL RAGRL+EA +E+MPI+PD +++GA L C ++ +L E+ ++++E
Sbjct: 391 EHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIE 450
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L P+ YYVL+SN+Y++ V ++R +MK++ L K PGCS V+L
Sbjct: 451 LEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCSYVEL 498
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 209/435 (48%), Gaps = 30/435 (6%)
Query: 131 VEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDM 189
+ Y M + + F F LK+C L G + H +I KVG + FV TGL+ M
Sbjct: 34 LSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITKVGCVFEPFVQTGLISM 93
Query: 190 YAKCRDIGSSRQVFDETLD--KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
Y K + ++R+VF+E K V + ++++GYV N E ++LF +M E V N +
Sbjct: 94 YCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSV 153
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TL L+ AC L G LH LK G + + +V + MY+KCG++ A+ +FDE+
Sbjct: 154 TLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEM 213
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
L+SW AM+ GY Q+G L+L+ + P+ VT+ VLS+ A LG ++G
Sbjct: 214 PVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVG- 272
Query: 368 MVHSLGIRLGLEDYT----VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-- 421
H + ++ +T + NAL++MYA+C + A+ +F+ E+ +++W +II G
Sbjct: 273 --HEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYG 330
Query: 422 ---------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
+ + PD V V+SAC+ G G + L
Sbjct: 331 MHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGP 390
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALFSDMLN 525
+ +++ + G + A+ + ++M K + W A++G + + + F ++
Sbjct: 391 EHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELAELAFERVI- 449
Query: 526 EEVQPNEVIFTTILS 540
E++P + + +LS
Sbjct: 450 -ELEPENIGYYVLLS 463
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 191/424 (45%), Gaps = 38/424 (8%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYS------FQVMIRWYFLNDLYKDIVEFYKCM 137
T L+SMY V AR VF+ +F+S + ++ Y N + V ++ M
Sbjct: 88 TGLISMYCKGSLVDNARKVFEE----NFHSRKLTVCYNALVSGYVSNSKCSEAVLLFRQM 143
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
+ ++ ++ AC +++ G +HC +K G D V+ + MY KC +
Sbjct: 144 NEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMYMKCGSV 203
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
++++FDE K ++SW +M++GY QN A L L+ M V + +TL ++++C
Sbjct: 204 NYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSC 263
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
A L A G + I G N L AL++MY +CGN+ A++VFD + LVSWT
Sbjct: 264 ANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWT 323
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG-----RMVHS 371
A+I GY G+ + A++LF + + P+ VLSA + G + G M +
Sbjct: 324 AIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRN 383
Query: 372 LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAV 431
+ G E Y+ +VD+ + + +A+ + E+ + PD
Sbjct: 384 YQLEPGPEHYS---CMVDLLGRAGRLKEAQTLIESMP-----------------IKPDGA 423
Query: 432 TLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDA 491
+++ AC V++ A+ L N+ L N Y+ +++ +
Sbjct: 424 VWGALLGACKIHKNVELAEL--AFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIM 481
Query: 492 MREK 495
M+EK
Sbjct: 482 MKEK 485
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 53 LNLLGLCKSTGSLKAFHAL---LIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ +L C + G+ H + + G T N N L++MY G++ A++VFD MP
Sbjct: 257 VGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPE 316
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
S+ +I Y ++ + V+ +K M + E D F VL AC D+G++
Sbjct: 317 RTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLE 375
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/437 (37%), Positives = 247/437 (56%), Gaps = 18/437 (4%)
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
+ R + + +H +++ G + + LL Y + I DA S+FD L D +W+
Sbjct: 12 RCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSV 71
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
M+ G+ ++G F + P++ T+ V+ +L +GR++H + ++ G
Sbjct: 72 MVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHG 131
Query: 378 L-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD------------ 424
L D+ V +LVDMYAKC V+ DA+ +FE KD++ W +I D
Sbjct: 132 LLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYESLVLFDR 191
Query: 425 ----NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
V PD V +V+V++ACA LGA+ + Y + G S +V +GTA+++ YAKCG
Sbjct: 192 MREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGF-SLDVILGTAMIDMYAKCG 250
Query: 481 DAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILS 540
+SAR VFD M+EKN ++WSAMI YG G G ++ LF ML+ + PN V F ++L
Sbjct: 251 SVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLY 310
Query: 541 ACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV 600
ACSH G++ EG + F SM + P +KHY CMVDLL RAGRL+EAL +E M +E D
Sbjct: 311 ACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDE 370
Query: 601 SLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELM 660
L+ A L C ++S+ +L E +LEL P +YVL+SN+YA G+W +V + R++M
Sbjct: 371 RLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMM 430
Query: 661 KQRGLSKSPGCSLVDLD 677
QR L K PG + +++D
Sbjct: 431 TQRKLKKIPGWTWIEVD 447
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/382 (32%), Positives = 202/382 (52%), Gaps = 20/382 (5%)
Query: 52 CLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
C++LL C++ ++ HA ++ +G D KL+ Y + A S+FD + D
Sbjct: 6 CIDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRD 65
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK---EHDNFVFSKVLKACCELRDIDEGMK 167
++ VM+ + D Y R+ L+ DN+ V++ C + D+ G
Sbjct: 66 SKTWSVMVGGFAKAG---DHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRV 122
Query: 168 VHCEIVKVGG-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H ++K G D FV LVDMYAKC + ++++F+ L K++V+WT MI Y DC
Sbjct: 123 IHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA--DC 180
Query: 227 -AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
A E LVLF+RMRE V +++ + ++V ACAKL A+H+ ++ + YI++ G ++ L T
Sbjct: 181 NAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGT 240
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
A++DMY KCG++ AR VFD + +++SW+AMI Y G A+ LF P
Sbjct: 241 AMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILP 300
Query: 346 NHVTIASVLSASAQLGNLNMG-RMVHSL----GIRLGLEDYTVINALVDMYAKCHVIADA 400
N VT S+L A + G + G R +S+ +R ++ YT +VD+ + + +A
Sbjct: 301 NRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYT---CMVDLLGRAGRLDEA 357
Query: 401 -RYIFETTSEKDVIAWNSIISG 421
R I T EKD W++++
Sbjct: 358 LRLIEAMTVEKDERLWSALLGA 379
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 277/518 (53%), Gaps = 21/518 (4%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D FV T LV+ Y KC + +R+VFD ++V +W SMI+ Y ++ + E +F RM+
Sbjct: 44 DVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQ 103
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+++T S++ AC L GK + I + E++ + TAL+ MY +C +
Sbjct: 104 HEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPE 163
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
+A VF + +L++W+A+I + G+ +AL+ F + PN VT S+L+
Sbjct: 164 NAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFT 223
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHV--IADARYIFETTSEKDVIAW 415
L +H L GL+D T + NALV++Y +C + A I + E+ + AW
Sbjct: 224 TPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAW 283
Query: 416 NSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
N +I+G + + D VT +SV++AC S ++ G +H+ + +
Sbjct: 284 NVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVE 343
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
GL S+V V AL N Y+KCG ++AR +FD+M ++ V+W+ M+ Y G+ L
Sbjct: 344 CGL-DSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLK 402
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLL 578
L M E V+ N + F ++LS+CSH G++ EG + F+S+ D +HY C+VDLL
Sbjct: 403 LIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLL 462
Query: 579 ARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYV 638
RAG+L+EA +++ MP EP++ + + L C ++ D G++ +K+LEL P + V
Sbjct: 463 GRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASV 522
Query: 639 LVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
++SN+Y+ G W ++R M R + K PG S + +
Sbjct: 523 VLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQV 560
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 212/453 (46%), Gaps = 24/453 (5%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
NT LV+ Y G + AR VFD MP ++ MI Y +++ + ++ M+ +
Sbjct: 48 NTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGE 107
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
D F +L AC ++ G V I + D FV T L+ MYA+CR ++ Q
Sbjct: 108 RCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQ 167
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
VF KN+++W+++I + + E L F M++ + N++T SL+
Sbjct: 168 VFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSG 227
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKC--GNIRDARSVFDELCSIDLVSWTAMI 319
L + +H I + G++ + + AL+++Y +C G + A + E+ + +W +I
Sbjct: 228 LEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLI 287
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GYT G +AL+ + + + VT SVL+A +L G+M+HS + GL+
Sbjct: 288 NGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLD 347
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL---------------- 422
D V NAL +MY+KC + +AR IF++ + ++WN ++
Sbjct: 348 SDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKM 407
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSS-LHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
+ V + +T VSV+S+C+ G + G H+ +G+ + G L++ + G
Sbjct: 408 EQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYG-CLVDLLGRAG 466
Query: 481 DAQSARMVFDAM-REKNTVTWSAMIGGYGMQGD 512
Q A M E VTW++++G + D
Sbjct: 467 KLQEAEKYISKMPSEPEIVTWASLLGACRVHKD 499
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 181/383 (47%), Gaps = 22/383 (5%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V+ N IT +++ + AL +GK++H + + ++ + TAL++ Y KCG++ DAR
Sbjct: 6 VKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDAR 65
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFD + + +W +MI Y+ S +A +F + + VT S+L A
Sbjct: 66 KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPE 125
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
NL G+ V E D V AL+ MYA+C +A +F +K++I W++II+
Sbjct: 126 NLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIIT 185
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
D+ + P+ VT +S+++ + ++ S +H T+ G L
Sbjct: 186 AFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG-LD 244
Query: 464 SNVYVGTALLNFYAKC--GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
+ AL+N Y +C G+ A ++ M E+ W+ +I GY + G +L +
Sbjct: 245 DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQ 304
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+ E + ++V F ++L+AC+ + + EG K +S + + + ++ ++
Sbjct: 305 RLQLEAIPVDKVTFISVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNALTNMYSKC 363
Query: 582 GRLEEALEFMENMPIEPDVSLFG 604
G +E A ++MPI VS G
Sbjct: 364 GSMENARRIFDSMPIRSAVSWNG 386
>gi|15230248|ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial; Flags: Precursor
gi|9293988|dbj|BAB01891.1| unnamed protein product [Arabidopsis thaliana]
gi|332643452|gb|AEE76973.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 601
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/511 (32%), Positives = 279/511 (54%), Gaps = 23/511 (4%)
Query: 188 DMYAKCRDIGS---SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
D+ A C IG +R+VFDE + V + SMI Y + E L L+++M ++
Sbjct: 55 DLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ T + AC L +G+ + + G + + + +++L++Y+KCG + +A +F
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
++ D++ WT M+ G+ Q+G KA++ + + + F + V + +L AS LG+
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTK 234
Query: 365 MGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD 423
MGR VH R GL V+ +LVDMYAK I A +F K ++W S+ISG
Sbjct: 235 MGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFA 294
Query: 424 DN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
N PD VTLV V+ AC+ +G+++ G +H Y K+ +L
Sbjct: 295 QNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDR-- 352
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
TAL++ Y+KCG S+R +F+ + K+ V W+ MI YG+ G+G ++LF M
Sbjct: 353 VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTES 412
Query: 527 EVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEE 586
++P+ F ++LSA SH+G+V +G F M +K PS KHYVC++DLLARAGR+EE
Sbjct: 413 NIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEE 472
Query: 587 ALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYAS 646
AL+ + + ++ + ++ A L GC + +G++ K+L+L+PD LVSN +A+
Sbjct: 473 ALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFAT 532
Query: 647 DGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+W V +VR+LM+ + K PG S ++++
Sbjct: 533 ANKWKEVAKVRKLMRNGAMEKVPGYSAIEVN 563
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 133/484 (27%), Positives = 235/484 (48%), Gaps = 27/484 (5%)
Query: 49 SIPCLNLLGLCKSTGSLK----AFHALLIVDG--LTNDKCNTKLVSMYGSFGHVKYARSV 102
++ C + +S LK HA +I G L + L++ G G + YAR V
Sbjct: 13 TLLCPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKV 72
Query: 103 FDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDI 162
FD +P + MI Y +++ Y M + D+ F+ +KAC +
Sbjct: 73 FDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVL 132
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGY 221
++G V C+ V G D FV + ++++Y KC + + +F + ++V+ WT+M+ G+
Sbjct: 133 EKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGF 192
Query: 222 VQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN 280
Q + + + + M+ EGF + LG L+ A L G+ +HGY+ + G+ +N
Sbjct: 193 AQAGKSLKAVEFYREMQNEGFGRDRVVMLG-LLQASGDLGDTKMGRSVHGYLYRTGLPMN 251
Query: 281 SHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW 340
+ T+L+DMY K G I A VF + VSW ++I G+ Q+G +KA + + +
Sbjct: 252 VVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQS 311
Query: 341 ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADA 400
F P+ VT+ VL A +Q+G+L GR+VH ++ + D AL+DMY+KC ++ +
Sbjct: 312 LGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSS 371
Query: 401 RYIFETTSEKDVIAWNSIIS--GL---------------DDNVSPDAVTLVSVISACASL 443
R IFE KD++ WN++IS G+ + N+ PD T S++SA +
Sbjct: 372 REIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHS 431
Query: 444 GAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV-TWSA 502
G V+ G + + + + L++ A+ G + A + ++ + N + W A
Sbjct: 432 GLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVA 491
Query: 503 MIGG 506
++ G
Sbjct: 492 LLSG 495
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+ +HA+ G L + + L+ + G+ AR VFD + ++ +++MI Y
Sbjct: 34 TQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSR 93
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
+ L L+ M+ E++QP+ FT + AC +G+V E + + DF + +
Sbjct: 94 GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACL-SGLVLEKGEAVWCKAVDFGYKNDV- 151
Query: 570 HYVC--MVDLLARAGRLEEA 587
+VC +++L + G+++EA
Sbjct: 152 -FVCSSVLNLYMKCGKMDEA 170
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 208/671 (30%), Positives = 333/671 (49%), Gaps = 52/671 (7%)
Query: 53 LNLLGLCKSTGSLKA---FHALLI-VDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+ L+ C G+L A H+ + D N L+SMY G + A+ FD +P
Sbjct: 11 IALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPR 70
Query: 109 P---DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV-FSKVLKACCE--LRDI 162
D ++ MI + N ++ ++ ++ M N V F VL +C E L +
Sbjct: 71 ASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSL 130
Query: 163 DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF----DETLDKNVVSWTSM 217
++ +H IV G ++FV T LVD Y K + + +VF DE ++V+ ++M
Sbjct: 131 EDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAM 190
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
I+ QN QE L LF M + + +TL S++ AC+ L ++L+ +
Sbjct: 191 ISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSAT----AFVLEQAM 246
Query: 278 EINSH-----LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
E+ S L T LL Y + ++ AR+ FD + S D+VSW AM Y Q P +AL
Sbjct: 247 EVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREAL 306
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLN---MGRMVHSLGIRLGLE-DYTVINALV 388
LF P+ T + L+A A +G+ + SL GLE D V NA +
Sbjct: 307 VLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATL 366
Query: 389 DMYAKCHVIADARYIFE--TTSEKDVIAWNSIIS-----GLDDN-------------VSP 428
+MYAKC +ADAR +FE + + +D I WNS+++ GL V P
Sbjct: 367 NMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKP 426
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMV 488
+ VT V+V+ A S ++ G +HA G S V + ALLN YAKCG A+ +
Sbjct: 427 NKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTV-IQNALLNMYAKCGSLDDAQAI 485
Query: 489 FD--AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
FD + +++ + W++++ GY G +L LF M + V+PN + F + L+AC+H G
Sbjct: 486 FDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGG 545
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+ +G + M D VP+ KH+ C+VDLL R GRL+EA + +E + DV + A
Sbjct: 546 KLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMAL 604
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C + GE +++++L P+ A Y++++++YA+ GRW +R+ M +G+
Sbjct: 605 LDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIR 664
Query: 667 KSPGCSLVDLD 677
PGCS V+++
Sbjct: 665 ADPGCSAVEVN 675
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 140/461 (30%), Positives = 215/461 (46%), Gaps = 56/461 (12%)
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
V N L +LV AC+ L L G+ +H I E NS L AL+ MY KCG++ DA+
Sbjct: 3 VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62
Query: 302 SVFDEL---CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKW-ADFFPNHVTIASVLSAS 357
FD L D+V+W AMI + ++G +AL+LF D PN VT SVL +
Sbjct: 63 QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122
Query: 358 AQLGNLNMG--RMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKD--- 411
+ G L++ R +H + G+E + V ALVD Y K + DA +F S+++
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182
Query: 412 -VIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLH 453
++ +++IS N P VTLVSV++AC+ L VGS+
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSML---PVGSAT- 238
Query: 454 AYSTKQGL----LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
A+ +Q + + + +GT LL YA+ D AR FDA++ + V+W+AM Y
Sbjct: 239 AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQ 298
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH-----TGMVGEGWKCFYSMCRDFKF 564
+L LF ML E V+P+ F T L+AC+ +G K S+ +
Sbjct: 299 HHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIG---KRIQSLLEEAGL 355
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENM-PIEPDVSLFGAFL-----HGCGLYSRFDL 618
+++ A+ G L +A E + P D + + L HG G + F+L
Sbjct: 356 EGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEA-FEL 414
Query: 619 GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVREL 659
+ M + L + P+K + V+ L AS R + Q RE+
Sbjct: 415 FQAMEAEKL-VKPNKVTF---VAVLDASTSR-TSIAQGREI 450
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 182/523 (34%), Positives = 272/523 (52%), Gaps = 25/523 (4%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
P+ F L++ YAK I +R+VFDE ++VS+ ++IA Y L LF +
Sbjct: 73 PNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEV 132
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
RE + + TL ++TAC L + LH +++ G + + + A+L Y + G +
Sbjct: 133 RELRLGLDGFTLSGVITACGDDVGL--VRQLHCFVVVCGHDCYASVNNAVLACYSRKGFL 190
Query: 298 RDARSVFDELCS---IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+AR VF E+ D VSW AMIV Q +A+ LF + + T+ASVL
Sbjct: 191 SEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVL 250
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH-VIADARYIFETTSEKDV 412
+A + +L GR H + I+ G + V + L+D+Y+KC + + R +FE + D+
Sbjct: 251 TAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDL 310
Query: 413 IAWNSIISGLD------------------DNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
+ WN++ISG + PD + V V SAC++L + +G +HA
Sbjct: 311 VLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHA 370
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+ K + + V V AL+ Y+KCG+ AR VFD M E NTV+ ++MI GY G
Sbjct: 371 LAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEV 430
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
SL LF ML +++ PN + F +LSAC HTG V EG K F M F P +HY CM
Sbjct: 431 ESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCM 490
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
+DLL RAG+L+EA +E MP P + L C + +L + L L P A
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNA 550
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YV++SN+YAS RW V+ LM++RG+ K PGCS +++D
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEID 593
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 226/454 (49%), Gaps = 30/454 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++ Y + AR VFD +P PD S+ +I Y + ++ +R+ D
Sbjct: 81 LINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLD 140
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF--VLTGLVDMYAKCRDIGSSRQVF 203
F S V+ AC + D+ ++HC +V V G D + V ++ Y++ + +R+VF
Sbjct: 141 GFTLSGVITACGD--DVGLVRQLHCFVV-VCGHDCYASVNNAVLACYSRKGFLSEARRVF 197
Query: 204 DETLD---KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
E + ++ VSW +MI Q+ E + LF M ++ + T+ S++TA ++
Sbjct: 198 REMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVK 257
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMI 319
L G+ HG ++K G NSH+ + L+D+Y KC G++ + R VF+E+ + DLV W MI
Sbjct: 258 DLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLWNTMI 317
Query: 320 VGYT-QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR--L 376
G++ + L F + + F P+ + V SA + L + ++G+ VH+L I+ +
Sbjct: 318 SGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDV 377
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------------- 421
+V NALV MY+KC + DAR +F+T E + ++ NS+I+G
Sbjct: 378 PYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESLRLFE 437
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
L+ +++P+++T ++V+SAC G V+ G ++ + + +++ +
Sbjct: 438 LMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRA 497
Query: 480 GDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
G + A + + M ++ W+ ++G G+
Sbjct: 498 GKLKEAERIIETMPFNPGSIEWATLLGACRKHGN 531
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 195/454 (42%), Gaps = 68/454 (14%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD-------- 299
T +L+ AC R L GK LH K I +++L +Y KCG++ +
Sbjct: 11 TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70
Query: 300 -----------------------ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
AR VFDE+ D+VS+ +I Y G L+LF
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFE 130
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCH 395
+ + + T++ V++A ++ + R +H + G + Y +V NA++ Y++
Sbjct: 131 EVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGHDCYASVNNAVLACYSRKG 188
Query: 396 VIADARYIFETTSE---KDVIAWNSII-------SGLD----------DNVSPDAVTLVS 435
+++AR +F E +D ++WN++I G++ + D T+ S
Sbjct: 189 FLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMAS 248
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC-GDAQSARMVFDAMRE 494
V++A + + G H K G N +VG+ L++ Y+KC G R VF+ +
Sbjct: 249 VLTAFTCVKDLVGGRQFHGMMIKSG-FHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITA 307
Query: 495 KNTVTWSAMIGGYGMQGD-GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+ V W+ MI G+ + D L F +M +P++ F + SACS+ G +
Sbjct: 308 PDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQ 367
Query: 554 CFYSMCRDFKFVPSMKHYV--CMVDLLARAGRLEEALEFMENMPIEPDVSL----FGAFL 607
+ VP + V +V + ++ G + +A + MP VSL G
Sbjct: 368 VHALAIKS--DVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQ 425
Query: 608 HGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
HG + S L E+M++K ++ P+ + ++S
Sbjct: 426 HGVEVES-LRLFELMLEK--DIAPNSITFIAVLS 456
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 66 KAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
K HAL I + ++ N LV+MY G+V AR VFD+MP + S MI Y
Sbjct: 366 KQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQ 425
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ + + + ++ M ++ ++ F VL AC ++EG K
Sbjct: 426 HGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQK 469
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 182/619 (29%), Positives = 318/619 (51%), Gaps = 31/619 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEH 144
L++ Y G +AR + D MP + SF ++I Y + +E F + R
Sbjct: 55 LLAAYCRLG--GHARRLLDEMPRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRA 112
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
D F ++ L AC + EG VH V G FV LV MYA+C D+G +RQVF
Sbjct: 113 DRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVF 172
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL--RA 261
D +++ VSW ++++GYV+ + L +F MR + N LGS++ CA
Sbjct: 173 DAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPV 232
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
+ +HG ++K G + + L +A++ MY K G + +A ++F + ++V + AMI G
Sbjct: 233 MDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAG 292
Query: 322 YTQ------SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
+ + +AL L+++ + P T +SV+ A G++ G+ +H ++
Sbjct: 293 LCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLK 352
Query: 376 LGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------- 425
+ D + +AL+D+Y + D F + ++DV+ W ++ISG N
Sbjct: 353 HCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTL 412
Query: 426 --------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
+ PD T+ SV++ACASL + G + ++TK G +G + ++ YA
Sbjct: 413 FHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGF-GRFTAMGNSCIHMYA 471
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
+ GD +A F M + V+WSA+I + G +L F++M++ +V PNE+ F
Sbjct: 472 RSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLG 531
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+L+ACSH G+V EG K + +M ++ P++KH C+VDLL RAGRL +A F+ +
Sbjct: 532 VLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFH 591
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
+ ++ + L C ++ + G+++ +++EL P + YV + N+Y G +++R
Sbjct: 592 DEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIR 651
Query: 658 ELMKQRGLSKSPGCSLVDL 676
++MK+RG+ K PG S ++L
Sbjct: 652 DVMKERGVKKEPGLSWIEL 670
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 121/246 (49%), Gaps = 5/246 (2%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY-KDIVEFYKCM 137
+D + L+ +Y + G ++ F S+P D ++ MI N+L+ + + F++ +
Sbjct: 358 DDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELL 417
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
LK D F S V+ AC L G ++ C K G G + + + MYA+ D+
Sbjct: 418 GAGLKP-DPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDV 476
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
++ + F E ++VSW+++I+ + Q+ CA++ L FN M + V N+IT ++TAC
Sbjct: 477 HAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTAC 536
Query: 257 AKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS-VFDELCSIDLVS 314
+ + +G K+ + + T ++D+ + G + DA + + D + + V
Sbjct: 537 SHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVI 596
Query: 315 WTAMIV 320
W +++
Sbjct: 597 WRSLLA 602
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 181/523 (34%), Positives = 272/523 (52%), Gaps = 25/523 (4%)
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
P+ F L++ YAK I +RQVFDE ++VS+ ++IA Y + L LF +
Sbjct: 73 PNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEV 132
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
RE + TL ++ AC L + LH +++ G + + + A+L Y + G +
Sbjct: 133 RELRFGLDGFTLSGVIIACGDDVGL--VRQLHCFVVVCGYDCYASVNNAVLACYSRKGFL 190
Query: 298 RDARSVFDELCS---IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
+AR VF E+ D VSW AMIV Q +A++LF + + T+ASVL
Sbjct: 191 NEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVL 250
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHV-IADARYIFETTSEKDV 412
+A + +L G H + I+ G + V + L+D+Y+KC + + R +FE + D+
Sbjct: 251 TAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDL 310
Query: 413 IAWNSIISGLD------------------DNVSPDAVTLVSVISACASLGAVQVGSSLHA 454
+ WN++ISG + PD + V V SAC++L + VG +HA
Sbjct: 311 VLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHA 370
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
+ K + + V V AL+ Y+KCG+ AR VFD M E N V+ ++MI GY G
Sbjct: 371 LAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEV 430
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
SL LF ML +++ PN + F +LSAC HTG V EG K F M F+ P +HY CM
Sbjct: 431 ESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCM 490
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
+DLL RAG+L+EA +E MP P + L C + +L + L+L P A
Sbjct: 491 IDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNA 550
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YV++SN+YAS RW V+ LM++RG+ K PGCS +++D
Sbjct: 551 APYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEID 593
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 224/454 (49%), Gaps = 30/454 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L++ Y + AR VFD +P PD S+ +I Y + + + +R+ D
Sbjct: 81 LINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGLD 140
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSF--VLTGLVDMYAKCRDIGSSRQVF 203
F S V+ AC + D+ ++HC +V V G D + V ++ Y++ + +R+VF
Sbjct: 141 GFTLSGVIIACGD--DVGLVRQLHCFVV-VCGYDCYASVNNAVLACYSRKGFLNEARRVF 197
Query: 204 DETLD---KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
E + ++ VSW +MI Q+ E + LF M ++ + T+ S++TA ++
Sbjct: 198 REMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCVK 257
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC-GNIRDARSVFDELCSIDLVSWTAMI 319
L G HG ++K G NSH+ + L+D+Y KC G + + R VF+E+ + DLV W MI
Sbjct: 258 DLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLWNTMI 317
Query: 320 VGYTQ-SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR--L 376
G++Q + + F + + F P+ + V SA + L + ++G+ VH+L I+ +
Sbjct: 318 SGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDI 377
Query: 377 GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG--------------- 421
+V NALV MY+KC + DAR +F+T E ++++ NS+I+G
Sbjct: 378 PYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESLRLFE 437
Query: 422 --LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
L +++P+ +T ++V+SAC G V+ G ++ + + +++ +
Sbjct: 438 LMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRA 497
Query: 480 GDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
G + A + + M ++ W+ ++G G+
Sbjct: 498 GKLKEAERIIETMPFNPGSIEWATLLGACRKHGN 531
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/504 (23%), Positives = 202/504 (40%), Gaps = 95/504 (18%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD-------- 299
T +L+ AC R L GK LH K I +++L +Y KCG++ +
Sbjct: 11 TFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLT 70
Query: 300 -----------------------ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT 336
AR VFDE+ D+VS+ +I Y G AL+LF
Sbjct: 71 QYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFA 130
Query: 337 DKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCH 395
+ + F + T++ V+ A ++ + R +H + G + Y +V NA++ Y++
Sbjct: 131 EVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKG 188
Query: 396 VIADARYIFETTSE---KDVIAWNSII-------SGLD----------DNVSPDAVTLVS 435
+ +AR +F E +D ++WN++I GL+ + D T+ S
Sbjct: 189 FLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMAS 248
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC-GDAQSARMVFDAMRE 494
V++A + + G H K G N +VG+ L++ Y+KC G R VF+ +
Sbjct: 249 VLTAFTCVKDLVGGMQFHGMMIKSG-FHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAA 307
Query: 495 KNTVTWSAMIGGYGMQGD-GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
+ V W+ MI G+ D + F +M + P++ F + SACS+ G +
Sbjct: 308 PDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQ 367
Query: 554 ----------------------CFYSMC-------RDFKFVP--SMKHYVCMVDLLARAG 582
YS C R F +P +M M+ A+ G
Sbjct: 368 VHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHG 427
Query: 583 RLEEALEFMENM---PIEPDVSLFGAFLHGCGLYSRFDLGEV---MIKKMLELHPDKACY 636
E+L E M I P+ F A L C + + G+ M+K+ + P+ Y
Sbjct: 428 VEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHY 487
Query: 637 YVLVSNLYASDGRWIRVNQVRELM 660
++ +L G+ ++ E M
Sbjct: 488 SCMI-DLLGRAGKLKEAERIIETM 510
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 7/161 (4%)
Query: 66 KAFHALLIVDGLTNDKC--NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
K HAL I + ++ N LV+MY G+V AR VFD+MP + S MI Y
Sbjct: 366 KQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQ 425
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK---VHCEIVKVGGPDS 180
+ + + + ++ M ++ + F VL AC ++EG K + E ++ P++
Sbjct: 426 HGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRI-EPEA 484
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMIAG 220
+ ++D+ + + + ++ + + + W +++
Sbjct: 485 EHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGA 525
>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 319/635 (50%), Gaps = 37/635 (5%)
Query: 58 LCKSTGSL------KAFHALLIVDGLTNDKC---NTKLVSMYGSFGHVKYARSVFDSMPN 108
+CK+ G+L + H + GL + C + L MYG G + AR VFD +P+
Sbjct: 155 VCKACGALQWSRFGRGVHGYVAKAGLHH--CVFVASSLADMYGKCGVLDDARKVFDYIPD 212
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ ++ ++ Y N +Y++ + MRK E S L A + I+EG +
Sbjct: 213 RNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQS 272
Query: 169 HCEIVKVGGP--DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
H I V G D+ + T +++ Y K I + +FD ++K+VV+W +I+GYVQ
Sbjct: 273 HA-IAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGL 331
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+E + + MR ++ + +TL +L++A + L GK + Y ++ G+E + L +
Sbjct: 332 VEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLAST 391
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
+DMY KCG+I +A+ VFD DL+ W ++ Y SG +AL+LF + + PN
Sbjct: 392 AVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPN 451
Query: 347 HVTIASVLSASAQLGNLNMGR----MVHSLGIRLGLEDYT-VINALVDMYAKCHVIADAR 401
+T ++ + + G +N + + S GI L +T ++N LV I R
Sbjct: 452 VITWNLIILSLLRNGQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLR 511
Query: 402 YIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+ E SGL P+A T+ +SAC +L ++ G S+H Y +
Sbjct: 512 KMQE--------------SGL----RPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQ 553
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
S + + T+L++ YAKCGD A VF + ++AMI Y + G ++ L+
Sbjct: 554 YSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYR 613
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+ + V+P+ + T++LSAC++ V + + F M P ++HY MVDLLA A
Sbjct: 614 SLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASA 673
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
G ++AL ME MP +PD + + C + +L E + K +LE PD + YV++S
Sbjct: 674 GETDKALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMIS 733
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
N YA +G W V ++RE+MK +GL K PGCS + +
Sbjct: 734 NAYAVEGSWDEVAKMREMMKVKGLKKKPGCSWIQI 768
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 252/487 (51%), Gaps = 26/487 (5%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
++ ++L+ C RD+ G ++H +I+K G + ++ T LV YAKC + ++ +F
Sbjct: 48 IYGEILQGCVYERDLCTGQQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFS 107
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ +NV SW ++I + + L+ F M E + + + ++ AC L+
Sbjct: 108 KLRVRNVFSWAAIIGVKCRIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRF 167
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
G+ +HGY+ K G+ + ++L DMY KCG + DAR VFD + + V+W A++VGY Q
Sbjct: 168 GRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQ 227
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
+G ++A++L ++ + P VT+++ LSASA +G + G+ H++ I GLE D +
Sbjct: 228 NGMYEEAIRLLSEMRKEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNIL 287
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNV 426
++++ Y K +I A IF+ EKDV+ WN +ISG +N+
Sbjct: 288 GTSILNFYCKVGLIEYAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENL 347
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D VTL +++SA S +++G + Y + GL S V TA ++ YAKCG +A+
Sbjct: 348 KFDCVTLSTLMSAATSTQNLKLGKEIQCYCIRHGLESDIVLASTA-VDMYAKCGSIVNAK 406
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VFD+ +K+ + W+ ++ Y G G +L LF +M E V PN + + I+ + G
Sbjct: 407 KVFDSTVQKDLILWNTLLSAYADSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNG 466
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP---IEPDVSLF 603
V E + F M F P++ + M++ L + G EEA+ F+ M + P+
Sbjct: 467 QVNEAKEMFLQMQSSGIF-PNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTI 525
Query: 604 GAFLHGC 610
L C
Sbjct: 526 TVALSAC 532
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 167/641 (26%), Positives = 293/641 (45%), Gaps = 66/641 (10%)
Query: 66 KAFHALLIVDG---LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+ HA ++ G N+ TKLV Y ++ A+ +F + + +S+ +I
Sbjct: 66 QQIHAQILKKGDFYARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKC 125
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
L + + + M + DNFV V KAC L+ G VH + K G F
Sbjct: 126 RIGLGEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVF 185
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V + L DMY KC + +R+VFD D+N V+W +++ GYVQN +E + L + MR+
Sbjct: 186 VASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEG 245
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+E ++T+ + ++A A + + +GK H + G+E+++ L T++L+ Y K G I A
Sbjct: 246 IEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAE 305
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
+FD + D+V+W +I GY Q G ++A+ + + + + VT+++++SA+
Sbjct: 306 MIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQ 365
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
NL +G+ + IR GLE D + + VDMYAKC I +A+ +F++T +KD+I WN+++S
Sbjct: 366 NLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLS 425
Query: 421 GL-DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
D +S +A+ L + S +++ N+ + + L N
Sbjct: 426 AYADSGLSGEALRLF---------------YEMQLESVPPNVITWNLIILSLLRN----- 465
Query: 480 GDAQSARMVFDAMREK----NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
G A+ +F M+ N ++W+ M+ G G ++ M ++PN
Sbjct: 466 GQVNEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTI 525
Query: 536 TTILSACS-----HTGMVGEGWKC-----------------FYSMCRDF---------KF 564
T LSAC H G G+ Y+ C D K
Sbjct: 526 TVALSACVNLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKL 585
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
+ Y M+ A G++ EA+ +E+ ++PD + L C +
Sbjct: 586 CSELPLYNAMISAYALYGKVREAITLYRSLEDGGVKPDNITITSLLSACNYGRDVNQAIE 645
Query: 622 MIKKMLELHPDKAC--YYVLVSNLYASDGRWIRVNQVRELM 660
+ + M+ H K C +Y L+ +L AS G + ++ E M
Sbjct: 646 VFRDMVSKHGMKPCLEHYGLMVDLLASAGETDKALRLMEEM 686
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 178/568 (31%), Positives = 305/568 (53%), Gaps = 40/568 (7%)
Query: 141 LKEHDNFVFSKVLKACCELRDIDE--GMKVHCEIVKVGGPDSFVLTGLVDMYAKCRD--- 195
+K+H + S+ L+ C L ++++ G+ + +++ P L+ L+D C +
Sbjct: 2 MKKHYKPILSQ-LENCRSLVELNQLHGLMIKSSVIRNVIP----LSRLIDFCTTCPETMN 56
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVT 254
+ +R VF+ +V W SMI GY + + L+ + M R+G+ + T ++
Sbjct: 57 LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGY-SPDYFTFPYVLK 115
Query: 255 ACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVS 314
AC+ LR + G +HG+++K G E+N ++ T LL MY+ CG + VF+++ ++V+
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 315 WTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI 374
W ++I G+ + A++ F + + N + +L A + ++ G+ H
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQ 235
Query: 375 RLGLEDY---------TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---- 421
LG + Y + +L+DMYAKC + ARY+F+ E+ +++WNSII+G
Sbjct: 236 GLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQN 295
Query: 422 -------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
LD ++PD VT +SVI A G Q+G S+HAY +K G + V
Sbjct: 296 GDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV 355
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE-E 527
AL+N YAK GDA+SA+ F+ + +K+T+ W+ +I G G G +L++F M +
Sbjct: 356 -CALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGN 414
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
P+ + + +L ACSH G+V EG + F M P+++HY CMVD+L+RAGR EEA
Sbjct: 415 ATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEA 474
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASD 647
++ MP++P+V+++GA L+GC ++ +L + + + E + YVL+SN+YA
Sbjct: 475 ERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKA 534
Query: 648 GRWIRVNQVRELMKQRGLSKSPGCSLVD 675
GRW V +RE MK + + K G S V+
Sbjct: 535 GRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/494 (31%), Positives = 243/494 (49%), Gaps = 43/494 (8%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTN---------DKCNTKLVSMYGSFGHVKYARS 101
P L+ L C+S L H L+I + D C T +M ++ YARS
Sbjct: 8 PILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETM-----NLSYARS 62
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
VF+S+ P Y + MIR Y + + FY+ M ++ D F F VLKAC LRD
Sbjct: 63 VFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRD 122
Query: 162 IDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAG 220
I G VH +VK G + +V T L+ MY C ++ +VF++ NVV+W S+I+G
Sbjct: 123 IQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISG 182
Query: 221 YVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE-- 278
+V N+ + + F M+ V+ N+ + L+ AC + + + GKW HG++ +G +
Sbjct: 183 FVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPY 242
Query: 279 ------INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
N L T+L+DMY KCG++R AR +FD + LVSW ++I GY+Q+G ++AL
Sbjct: 243 FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEAL 302
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMY 391
+F D P+ VT SV+ AS G +G+ +H+ + G ++D ++ ALV+MY
Sbjct: 303 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY 362
Query: 392 AKCHVIADARYIFETTSEKDVIAWNSIISGL------------------DDNVSPDAVTL 433
AK A+ FE +KD IAW +I GL N +PD +T
Sbjct: 363 AKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITY 422
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+ V+ AC+ +G V+ G A L V +++ ++ G + A + M
Sbjct: 423 LGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMP 482
Query: 494 EKNTVT-WSAMIGG 506
K V W A++ G
Sbjct: 483 VKPNVNIWGALLNG 496
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 214/444 (48%), Gaps = 40/444 (9%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H ++ G N +T L+ MY G V Y VF+ +P + ++ +I + N+ +
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---------GP 178
D +E ++ M+ + + + +L AC +DI G H + +G G
Sbjct: 190 SDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGF 249
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
+ + T L+DMYAKC D+ ++R +FD ++ +VSW S+I GY QN A+E L +F M
Sbjct: 250 NVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML 309
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
+ + +++T S++ A G+ +H Y+ K G ++ +V AL++MY K G+
Sbjct: 310 DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAE 369
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSAS 357
A+ F++L D ++WT +I+G G+ ++AL +F ++ + P+ +T VL A
Sbjct: 370 SAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429
Query: 358 AQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEK-D 411
+ +G + G+ M G+ +E Y +VD+ ++ +A + +T K +
Sbjct: 430 SHIGLVEEGQRYFAEMRDLHGLEPTVEHY---GCMVDILSRAGRFEEAERLVKTMPVKPN 486
Query: 412 VIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
V W ++++G D + + +++ + + + L S +YV
Sbjct: 487 VNIWGALLNGCDIHEN------------------LELTDRIRSMVAEPEELGSGIYV--L 526
Query: 472 LLNFYAKCGDAQSARMVFDAMREK 495
L N YAK G +++ ++M+ K
Sbjct: 527 LSNIYAKAGRWADVKLIRESMKSK 550
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,708,211,869
Number of Sequences: 23463169
Number of extensions: 445943777
Number of successful extensions: 1454300
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7183
Number of HSP's successfully gapped in prelim test: 3524
Number of HSP's that attempted gapping in prelim test: 1247040
Number of HSP's gapped (non-prelim): 55840
length of query: 691
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 541
effective length of database: 8,839,720,017
effective search space: 4782288529197
effective search space used: 4782288529197
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 81 (35.8 bits)