BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040394
(691 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/684 (57%), Positives = 489/684 (71%), Gaps = 20/684 (2%)
Query: 11 VSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHA 70
+S T++ R S+T + E + +S H S PC LL C + SL+ H
Sbjct: 7 LSPTRRFGFPPRCVSFTTIKELILTE-ENDGSSLHYAASSPCFLLLSKCTNIDSLRQSHG 65
Query: 71 LLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD 129
+L +GL D TKLVS+YG FG+ K AR VFD +P PDFY ++VM+R Y LN +
Sbjct: 66 VLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVE 125
Query: 130 IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDM 189
+V+ Y + K +D+ VFSK LKAC EL+D+D G K+HC++VKV D+ VLTGL+DM
Sbjct: 126 VVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDM 185
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
YAKC +I S+ +VF++ +NVV WTSMIAGYV+ND +EGLVLFNRMRE V GN+ T
Sbjct: 186 YAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTY 245
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
G+L+ AC KL ALHQGKW HG ++K GIE++S LVT+LLDMYVKCG+I +AR VF+E
Sbjct: 246 GTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSH 305
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+DLV WTAMIVGYT +G ++AL LF K + PN VTIASVLS + NL +GR V
Sbjct: 306 VDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSV 365
Query: 370 HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---- 425
H L I++G+ D V NALV MYAKC+ DA+Y+FE SEKD++AWNSIISG N
Sbjct: 366 HGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIH 425
Query: 426 -------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL-SSNVYVGTA 471
V+P+ VT+ S+ SACASLG++ VGSSLHAYS K G L SS+V+VGTA
Sbjct: 426 EALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTA 485
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
LL+FYAKCGD QSAR++FD + EKNT+TWSAMIGGYG QGD GSL LF +ML ++ +PN
Sbjct: 486 LLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPN 545
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
E FT+ILSAC HTGMV EG K F SM +D+ F PS KHY CMVD+LARAG LE+AL+ +
Sbjct: 546 ESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 605
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
E MPI+PDV FGAFLHGCG++SRFDLGE++IKKML+LHPD A YYVLVSNLYASDGRW
Sbjct: 606 EKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWN 665
Query: 652 RVNQVRELMKQRGLSKSPGCSLVD 675
+ +VR LMKQRGLSK G S ++
Sbjct: 666 QAKEVRNLMKQRGLSKIAGHSTME 689
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/647 (36%), Positives = 372/647 (57%), Gaps = 23/647 (3%)
Query: 51 PCLNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNP 109
P LL C S L+ L+ +GL + TKLVS++ +G V A VF+ + +
Sbjct: 39 PAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 110 DFYSFQVMIRWYF-LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
+ M++ + ++DL K + +F+ MR E + F+ +LK C + ++ G ++
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKAL-QFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEI 157
Query: 169 HCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H +VK G D F +TGL +MYAKCR + +R+VFD ++++VSW +++AGY QN A
Sbjct: 158 HGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMA 217
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ L + M E ++ + IT+ S++ A + LR + GK +HGY ++ G + ++ TAL
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY KCG++ AR +FD + ++VSW +MI Y Q+ P +A+ +F P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
V++ L A A LG+L GR +H L + LGL+ + +V+N+L+ MY KC + A +F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+ +++WN++I G N V PD T VSVI+A A L
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H + L NV+V TAL++ YAKCG AR++FD M E++ TW+AMI GYG
Sbjct: 458 KWIHGVVMR-SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L LF +M ++PN V F +++SACSH+G+V G KCFY M ++ SM
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY MVDLL RAGRL EA +F+ MP++P V+++GA L C ++ + E +++ EL
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+PD Y+VL++N+Y + W +V QVR M ++GL K+PGCS+V++
Sbjct: 637 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEI 683
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 231/646 (35%), Positives = 370/646 (57%), Gaps = 31/646 (4%)
Query: 55 LLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYS 113
L C + S K HA L+V + C + KLV++Y G+V AR FD + N D Y+
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYA 119
Query: 114 FQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+ +MI Y +++ F M D F VLKAC R + +G K+HC
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLA 176
Query: 173 VKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGL 231
+K G D +V L+ +Y++ + +G++R +FDE +++ SW +MI+GY Q+ A+E L
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 232 VLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMY 291
L N +R + +T+ SL++AC + ++G +H Y +K G+E + L+D+Y
Sbjct: 237 TLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
+ G +RD + VFD + DL+SW ++I Y + P +A+ LF + + + P+ +T+
Sbjct: 293 AEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLI 352
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETTSE 409
S+ S +QLG++ R V +R G LED T+ NA+V MYAK ++ AR +F
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 410 KDVIAWNSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSS 451
DVI+WN+IISG N ++ + T VSV+ AC+ GA++ G
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
LH K GL +V+V T+L + Y KCG + A +F + N+V W+ +I +G G
Sbjct: 473 LHGRLLKNGLYL-DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHY 571
G ++ LF +ML+E V+P+ + F T+LSACSH+G+V EG CF M D+ PS+KHY
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 572 VCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
CMVD+ RAG+LE AL+F+++M ++PD S++GA L C ++ DLG++ + + E+ P
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 651
Query: 632 DKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ Y+VL+SN+YAS G+W V+++R + +GL K+PG S +++D
Sbjct: 652 EHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 235/655 (35%), Positives = 364/655 (55%), Gaps = 30/655 (4%)
Query: 48 PSIPCLNLLGLCKSTGSLK---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVF 103
P C ++L LC + SLK + +G D +KL MY + G +K A VF
Sbjct: 94 PRTLC-SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 104 DSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDID 163
D + + +++ + + + +K M E D++ FS V K+ LR +
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 164 EGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G ++H I+K G G + V LV Y K + + S+R+VFDE +++V+SW S+I GYV
Sbjct: 213 GGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
N A++GL +F +M +E + T+ S+ CA R + G+ +H +K
Sbjct: 273 SNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDR 332
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
LLDMY KCG++ A++VF E+ +VS+T+MI GY + G +A+KLF + +
Sbjct: 333 FCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR---LGLEDYTVINALVDMYAKCHVIAD 399
P+ T+ +VL+ A+ L+ G+ VH I+ LG D V NAL+DMYAKC + +
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDLGF-DIFVSNALMDMYAKCGSMQE 450
Query: 400 ARYIFETTSEKDVIAWNSIISGLDDNV------------------SPDAVTLVSVISACA 441
A +F KD+I+WN+II G N SPD T+ V+ ACA
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
SL A G +H Y + G S +V +L++ YAKCG A M+FD + K+ V+W+
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDR-HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWT 569
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRD 561
MI GYGM G G ++ALF+ M ++ +E+ F ++L ACSH+G+V EGW+ F M +
Sbjct: 570 VMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Query: 562 FKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEV 621
K P+++HY C+VD+LAR G L +A F+ENMPI PD +++GA L GC ++ L E
Sbjct: 630 CKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEK 689
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ +K+ EL P+ YYVL++N+YA +W +V ++R+ + QRGL K+PGCS +++
Sbjct: 690 VAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 220/649 (33%), Positives = 352/649 (54%), Gaps = 26/649 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
LN +S KA H +I G + + L Y GH+ YAR +F+ MP
Sbjct: 22 LNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLL 81
Query: 113 SFQVMIRWYFLNDLYKDIVE-FYKCMRKRLK-EHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ ++IR Y LY D + F + + + +K D + + V KA EL+ + G+ VH
Sbjct: 82 SYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHG 141
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
I++ G D +V L+ MY + +R VFD +++V+SW +MI+GY +N +
Sbjct: 142 RILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMND 201
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L++F+ M V+ + T+ S++ C L+ L G+ +H + + + + AL++
Sbjct: 202 ALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVN 261
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY+KCG + +AR VFD + D+++WT MI GYT+ G + AL+L ++ PN VT
Sbjct: 262 MYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 350 IASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTS 408
IAS++S +N G+ +H +R + D + +L+ MYAKC + +F S
Sbjct: 322 IASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 409 EKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSS 451
+ W++II+G N V P+ TL S++ A A+L ++ +
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK----NTVTWSAMIGGY 507
+H Y TK G +SS + T L++ Y+KCG +SA +F+ ++EK + V W A+I GY
Sbjct: 442 IHCYLTKTGFMSS-LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGY 500
Query: 508 GMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPS 567
GM GDG +L +F +M+ V PNE+ FT+ L+ACSH+G+V EG F M +K +
Sbjct: 501 GMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLAR 560
Query: 568 MKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKML 627
HY C+VDLL RAGRL+EA + +P EP +++GA L C + LGE+ K+
Sbjct: 561 SNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLF 620
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
EL P+ YVL++N+YA+ GRW + +VR +M+ GL K PG S +++
Sbjct: 621 ELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 238/489 (48%), Gaps = 27/489 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+ +L + I + +HC ++ G +L+ L YA C I +R++F+E
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQ 77
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--GNQITLGSLVTACAKLRALHQGK 266
+++S+ +I YV+ + + +F RM V+ + T + A +L+++ G
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
+HG IL+ + ++ ALL MY+ G + AR VFD + + D++SW MI GY ++G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL--GIRLGLEDYTVI 384
Y + AL +F +H TI S+L L +L MGR VH L RLG + V
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG-DKIEVK 256
Query: 385 NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VS 427
NALV+MY KC + +AR++F+ +DVI W +I+G ++ V
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
P+AVT+ S++S C V G LH ++ +Q + S++ + T+L++ YAKC
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY-SDIIIETSLISMYAKCKRVDLCFR 375
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
VF + +T WSA+I G +L LF M E+V+PN ++L A +
Sbjct: 376 VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALAD 435
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE---PDVSLFG 604
+ + + + F+ S+ +V + ++ G LE A + + + DV L+G
Sbjct: 436 LRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 605 AFLHGCGLY 613
A + G G++
Sbjct: 495 ALISGYGMH 503
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/601 (33%), Positives = 335/601 (55%), Gaps = 24/601 (3%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
AR +F M Y + +++ +++++ + M + ++ DNF LKAC E
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 159 LRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTS 216
LR+++ G +H + K G D +V + L+ MY KC + + ++FDE ++V+W+S
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 217 MIAGYVQNDCAQEGLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKI 275
M++G+ +N + + F RM V +++TL +LV+AC KL G+ +HG++++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 276 GIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF 335
G + LV +LL+ Y K ++A ++F + D++SW+ +I Y Q+G +AL +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 336 TDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKC 394
D PN T+ VL A A +L GR H L IR GLE + V ALVDMY KC
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 395 HVIADARYIFETTSEKDVIAWNSIISG------------------LDDNVSPDAVTLVSV 436
+A +F KDV++W ++ISG L++N PDA+ +V V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 437 ISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+ +C+ LG ++ H+Y K G SN ++G +L+ Y++CG +A VF+ + K+
Sbjct: 373 LGSCSELGFLEQAKCFHSYVIKYGF-DSNPFIGASLVELYSRCGSLGNASKVFNGIALKD 431
Query: 497 TVTWSAMIGGYGMQGDGGGSLALFSDML-NEEVQPNEVIFTTILSACSHTGMVGEGWKCF 555
TV W+++I GYG+ G G +L F+ M+ + EV+PNEV F +ILSACSH G++ EG + F
Sbjct: 432 TVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIF 491
Query: 556 YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSR 615
M D++ P+++HY +VDLL R G L+ A+E + MP P + G L C ++
Sbjct: 492 KLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQN 551
Query: 616 FDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
++ E + KK+ EL + A YY+L+SN+Y G W V ++R +KQRG+ K SL++
Sbjct: 552 GEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIE 611
Query: 676 L 676
+
Sbjct: 612 I 612
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 209/424 (49%), Gaps = 22/424 (5%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK- 142
+ L+ MY G + A +FD + PD ++ M+ + N VEF++ M
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQ 201
D ++ AC +L + G VH +++ G D ++ L++ YAK R +
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVN 219
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+F +K+V+SW+++IA YVQN A E L++FN M + E N T+ ++ ACA
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
L QG+ H ++ G+E + TAL+DMY+KC + +A +VF + D+VSW A+I G
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 322 YTQSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
+T +G ++++ F+ + P+ + + VL + ++LG L + HS I+ G +
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS 399
Query: 381 YTVINA-LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL----------------- 422
I A LV++Y++C + +A +F + KD + W S+I+G
Sbjct: 400 NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMV 459
Query: 423 -DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
V P+ VT +S++SAC+ G + G + L+ N+ L++ + GD
Sbjct: 460 KSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGD 519
Query: 482 AQSA 485
+A
Sbjct: 520 LDTA 523
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 160/335 (47%), Gaps = 25/335 (7%)
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DAR +F E+ L W ++ ++ ++ L F+ + P++ T+ L A
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 359 QLGNLNMGRMVHSL---GIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+L +N G M+H + LG D V ++L+ MY KC + +A +F+ + D++ W
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLG-SDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 416 NSIISGLDDN------------------VSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
+S++SG + N V+PD VTL++++SAC L ++G +H +
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
++G S+++ + +LLN YAK + A +F + EK+ ++WS +I Y G +L
Sbjct: 191 RRG-FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEAL 249
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
+F+DM+++ +PN +L AC+ + +G K R +K +VD+
Sbjct: 250 LVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDM 308
Query: 578 LARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
+ EEA +P DV + A + G L
Sbjct: 309 YMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTL 342
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 4/201 (1%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL- 126
H L I GL T K +T LV MY + A +VF +P D S+ +I + LN +
Sbjct: 287 HELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMA 346
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTG 185
++ I EF + + D + KVL +C EL +++ H ++K G + F+
Sbjct: 347 HRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGAS 406
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGFVEG 244
LV++Y++C +G++ +VF+ K+ V WTS+I GY + + L FN M + V+
Sbjct: 407 LVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKP 466
Query: 245 NQITLGSLVTACAKLRALHQG 265
N++T S+++AC+ +H+G
Sbjct: 467 NEVTFLSILSACSHAGLIHEG 487
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 237/678 (34%), Positives = 373/678 (55%), Gaps = 64/678 (9%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKCN-TKLVSMYGSFG---HVKYARSVFDSMPNPDFYS- 113
CK+ LK FH L GL ND TKLV+ G + +A+ VF+ N + Y
Sbjct: 42 CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFE---NSESYGT 98
Query: 114 ---FQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
+ +IR Y + L + + + M D + F L AC + R G+++H
Sbjct: 99 CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHG 158
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQE 229
IVK+G D FV LV YA+C ++ S+R+VFDE ++NVVSWTSMI GY + D A++
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKD 218
Query: 230 GLVLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ LF RM R+ V N +T+ +++ACAKL L G+ ++ +I GIE+N +V+AL+
Sbjct: 219 AVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALV 278
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
DMY+KC I A+ +FDE + +L AM Y + G +AL +F + P+ +
Sbjct: 279 DMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRI 338
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLEDY-TVINALVDMYAKCH------------ 395
++ S +S+ +QL N+ G+ H +R G E + + NAL+DMY KCH
Sbjct: 339 SMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 396 ----------VIA--------DARY-IFETTSEKDVIAWNSIISGL-------------- 422
++A DA + FET EK++++WN+IISGL
Sbjct: 399 SNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 423 ----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAK 478
+ V+ D VT++S+ SAC LGA+ + ++ Y K G + +V +GT L++ +++
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG-IQLDVRLGTTLVDMFSR 517
Query: 479 CGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTI 538
CGD +SA +F+++ ++ W+A IG M G+ ++ LF DM+ + ++P+ V F
Sbjct: 518 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 577
Query: 539 LSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEP 598
L+ACSH G+V +G + FYSM + P HY CMVDLL RAG LEEA++ +E+MP+EP
Sbjct: 578 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 637
Query: 599 DVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRE 658
+ ++ + L C + ++ +K+ L P++ YVL+SN+YAS GRW + +VR
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 659 LMKQRGLSKSPGCSLVDL 676
MK++GL K PG S + +
Sbjct: 698 SMKEKGLRKPPGTSSIQI 715
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/685 (33%), Positives = 346/685 (50%), Gaps = 68/685 (9%)
Query: 59 CKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD--FYSFQV 116
CK+ +K H L+ G+ + L+S Y S G + +A S+ P D Y +
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG 176
+IR Y N + + M DN+ F V KAC E+ + G H + G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 177 G-PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
+ FV LV MY++CR + +R+VFDE +VVSW S+I Y + + L +F+
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 236 RMREGF-VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
RM F + ITL +++ CA L GK LH + + + N + L+DMY KC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK----------WADFF 344
G + +A +VF + D+VSW AM+ GY+Q G + A++LF + W+
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 345 -------------------------PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
PN VT+ SVLS A +G L G+ +H I+ ++
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 380 --------DYTVINALVDMYAKCHVIADARYIFETTS--EKDVIAWNSIISGL------- 422
+ VIN L+DMYAKC + AR +F++ S E+DV+ W +I G
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 423 ------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
D P+A T+ + ACASL A+++G +HAY+ + + ++V
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN 517
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
L++ YAKCG AR+VFD M KN VTW++++ GYGM G G +L +F +M +
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKL 577
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
+ V +L ACSH+GM+ +G + F M F P +HY C+VDLL RAGRL AL
Sbjct: 578 DGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRL 637
Query: 591 MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRW 650
+E MP+EP ++ AFL C ++ + +LGE +K+ EL + Y L+SNLYA+ GRW
Sbjct: 638 IEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRW 697
Query: 651 IRVNQVRELMKQRGLSKSPGCSLVD 675
V ++R LM+ +G+ K PGCS V+
Sbjct: 698 KDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 155/311 (49%), Gaps = 23/311 (7%)
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID--LVSW 315
K + + Q K +H +L GI + +L + L+ Y+ G + A S+ D + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 316 TAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
++I Y +G +K L LF + P++ T V A ++ ++ G H+L +
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 376 LG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
G + + V NALV MY++C ++DAR +F+ S DV++WNSII
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 423 ------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
+ PD +TLV+V+ CASLG +G LH ++ ++ N++VG L++ Y
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-NMFVGNCLVDMY 274
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG A VF M K+ V+W+AM+ GY G ++ LF M E+++ + V ++
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 537 TILSACSHTGM 547
+S + G+
Sbjct: 335 AAISGYAQRGL 345
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 18/273 (6%)
Query: 53 LNLLGLCKSTGSL---KAFHALLI---VDGLTNDKCN-----TKLVSMYGSFGHVKYARS 101
+++L C S G+L K H I +D N + +L+ MY V AR+
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 102 VFDSMP--NPDFYSFQVMIRWYFLN-DLYKDIVEFYKCMRKRLKEHDN-FVFSKVLKACC 157
+FDS+ D ++ VMI Y + D K + + + + N F S L AC
Sbjct: 429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488
Query: 158 ELRDIDEGMKVHCEIVK--VGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWT 215
L + G ++H ++ FV L+DMYAKC I +R VFD + KN V+WT
Sbjct: 489 SLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWT 548
Query: 216 SMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG-KWLHGYILK 274
S++ GY + +E L +F+ MR + + +TL ++ AC+ + QG ++ +
Sbjct: 549 SLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTV 608
Query: 275 IGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
G+ L+D+ + G + A + +E+
Sbjct: 609 FGVSPGPEHYACLVDLLGRAGRLNAALRLIEEM 641
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 345/610 (56%), Gaps = 21/610 (3%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV MY G + AR VFD MP D S+ +I Y + Y++ +E Y ++ D
Sbjct: 147 LVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPD 206
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFD 204
+F S VL A L + +G +H +K G V+ LV MY K R +R+VFD
Sbjct: 207 SFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFD 266
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
E ++ VS+ +MI GY++ + +E + +F + F + + +T+ S++ AC LR L
Sbjct: 267 EMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQF-KPDLLTVSSVLRACGHLRDLSL 325
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
K+++ Y+LK G + S + L+D+Y KCG++ AR VF+ + D VSW ++I GY Q
Sbjct: 326 AKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQ 385
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTV 383
SG +A+KLF + +H+T ++S S +L +L G+ +HS GI+ G+ D +V
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSV 445
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS----------GLD-------DNV 426
NAL+DMYAKC + D+ IF + D + WN++IS GL V
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEV 505
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PD T + + CASL A ++G +H + G S + +G AL+ Y+KCG +++
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY-ESELQIGNALIEMYSKCGCLENSS 564
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
VF+ M ++ VTW+ MI YGM G+G +L F+DM + P+ V+F I+ ACSH+G
Sbjct: 565 RVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSG 624
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
+V EG CF M +K P ++HY C+VDLL+R+ ++ +A EF++ MPI+PD S++ +
Sbjct: 625 LVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASV 684
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C + E + ++++EL+PD Y +L SN YA+ +W +V+ +R+ +K + ++
Sbjct: 685 LRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHIT 744
Query: 667 KSPGCSLVDL 676
K+PG S +++
Sbjct: 745 KNPGYSWIEV 754
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 173/602 (28%), Positives = 304/602 (50%), Gaps = 33/602 (5%)
Query: 65 LKAFHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSM-PNPDFYSFQVMIRWYF 122
L+ HAL+I GL ++D + KL+ Y F + SVF + P + Y + +IR +
Sbjct: 23 LRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFS 82
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
N L+ + +EFY +R+ D + F V+KAC L D + G V+ +I+ +G D F
Sbjct: 83 KNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLF 142
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V LVDMY++ + +RQVFDE +++VSW S+I+GY + +E L +++ ++ +
Sbjct: 143 VGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSW 202
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T+ S++ A L + QG+ LHG+ LK G+ + L+ MY+K DAR
Sbjct: 203 IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDAR 262
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VFDE+ D VS+ MI GY + ++++++F + F P+ +T++SVL A L
Sbjct: 263 RVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLR 321
Query: 362 NLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L++ + +++ ++ G + + TV N L+D+YAKC + AR +F + KD ++WNSIIS
Sbjct: 322 DLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIIS 381
Query: 421 GLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G + D +T + +IS L ++ G LH+ K G +
Sbjct: 382 GYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG-IC 440
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
++ V AL++ YAKCG+ + +F +M +TVTW+ +I GD L + + M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
EV P+ F L C+ G + + R F + ++ ++++ ++ G
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMYSKCGC 559
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELH-----PDKACYYV 638
LE + E M DV + ++ G+Y GE ++ ++ PD +
Sbjct: 560 LENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGIVPDSVVFIA 615
Query: 639 LV 640
++
Sbjct: 616 II 617
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/515 (28%), Positives = 255/515 (49%), Gaps = 38/515 (7%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDE-TLDK 209
+ +A +++E ++H ++ +G S +G L+D Y+ R+ SS VF + K
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
NV W S+I + +N E L + ++RE V ++ T S++ ACA L G ++
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
IL +G E + + AL+DMY + G + AR VFDE+ DLVSW ++I GY+ GY +
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR-LGLEDYTVINALV 388
+AL+++ + K + P+ T++SVL A L + G+ +H ++ V N LV
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 389 DMYAKCHVIADARYIFETTSEKDVIAWNSIISG---LD-------------DNVSPDAVT 432
MY K DAR +F+ +D +++N++I G L+ D PD +T
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLT 309
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ SV+ AC L + + ++ Y K G + + V L++ YAKCGD +AR VF++M
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST-VRNILIDVYAKCGDMITARDVFNSM 368
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH-------T 545
K+TV+W+++I GY GD ++ LF M+ E Q + + + ++S +
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+ G K +C D + ++D+ A+ G + ++L+ +M D +
Sbjct: 429 GLHSNGIKS--GICIDLSVSNA------LIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNT 479
Query: 606 FLHGCGLYSRFDLGEVMIKKML--ELHPDKACYYV 638
+ C + F G + +M E+ PD A + V
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLV 514
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/634 (33%), Positives = 347/634 (54%), Gaps = 27/634 (4%)
Query: 68 FHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LND 125
+ L+ G D T L+ Y G++ YAR VFD++P ++ MI +
Sbjct: 170 LQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGR 229
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLT 184
Y + FY+ M + D ++ S VL AC L ++ G ++H I++ G D+ ++
Sbjct: 230 SYVSLQLFYQLMEDNVVP-DGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
L+D Y KC + ++ ++F+ +KN++SWT++++GY QN +E + LF M + ++
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ S++T+CA L AL G +H Y +K + +S++ +L+DMY KC + DAR VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 305 DELCSIDLVSWTAMIVGYTQSGYP---DKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
D + D+V + AMI GY++ G +AL +F D ++ P+ +T S+L ASA L
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+L + + +H L + GL D +AL+D+Y+ C+ + D+R +F+ KD++ WNS+ +
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 421 G--------------LDDNVS---PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G L+ +S PD T ++++A +L +VQ+G H K+GL
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGL-E 587
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
N Y+ ALL+ YAKCG + A FD+ ++ V W+++I Y G+G +L + M
Sbjct: 588 CNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKM 647
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
++E ++PN + F +LSACSH G+V +G K F M R F P +HYVCMV LL RAGR
Sbjct: 648 MSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGR 706
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L +A E +E MP +P ++ + L GC +L E + + P + + ++SN+
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNI 766
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YAS G W +VRE MK G+ K PG S + ++
Sbjct: 767 YASKGMWTEAKKVRERMKVEGVVKEPGRSWIGIN 800
Score = 263 bits (671), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 190/656 (28%), Positives = 328/656 (50%), Gaps = 68/656 (10%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H +IV GL D + L+++Y G + YAR VF+ MP + S+ M+ + +Y
Sbjct: 67 HGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIY 126
Query: 128 KD-IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM--KVHCEIVKVG-GPDSFVL 183
++ +V F + R R + ++ S ++AC L M ++ +VK G D +V
Sbjct: 127 EESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVG 186
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 243
T L+D Y K +I +R VFD +K+ V+WT+MI+G V+ + L LF ++ E V
Sbjct: 187 TLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246
Query: 244 GNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSV 303
+ L ++++AC+ L L GK +H +IL+ G+E+++ L+ L+D YVKCG + A +
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Query: 304 FDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363
F+ + + +++SWT ++ GY Q+ +A++LFT P+ +S+L++ A L L
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHAL 366
Query: 364 NMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL 422
G VH+ I+ L D V N+L+DMYAKC + DAR +F+ + DV+ +N++I G
Sbjct: 367 GFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 426
Query: 423 D--------------------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
+ P +T VS++ A ASL ++ + +H K G L
Sbjct: 427 SRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG-L 485
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
+ +++ G+AL++ Y+ C + +R+VFD M+ K+ V W++M GY Q + +L LF +
Sbjct: 486 NLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLE 545
Query: 523 MLNEEVQPNEVIFTTILSACS-----------HTGMVGEGWKC----------FYSMC-- 559
+ +P+E F +++A H ++ G +C Y+ C
Sbjct: 546 LQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGS 605
Query: 560 -----RDFKFVPSMKHYVC---MVDLLARAGRLEEALEFMENM---PIEPDVSLFGAFLH 608
+ F S + VC ++ A G ++AL+ +E M IEP+ F L
Sbjct: 606 PEDAHKAFDSAAS-RDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Query: 609 GCGLYSRFDLGEVMIKKMLE--LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
C + G + ML + P+ Y +VS L GR R+N+ REL+++
Sbjct: 665 ACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLL----GRAGRLNKARELIEK 716
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 213/475 (44%), Gaps = 33/475 (6%)
Query: 36 ELDQTFASFHSLPSI-PCLNLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTK-LVSMY 90
EL + + F P + C ++L C S +L HA I L ND T L+ MY
Sbjct: 336 ELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMY 395
Query: 91 GSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF-LNDLYK--DIVEFYKCMRKRLKEHDNF 147
+ AR VFD D F MI Y L ++ + + ++ MR RL
Sbjct: 396 AKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLL 455
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDET 206
F +L+A L + ++H + K G D F + L+D+Y+ C + SR VFDE
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 207 LDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
K++V W SM AGYVQ +E L LF ++ ++ T ++VTA L ++ G+
Sbjct: 516 KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQ 575
Query: 267 WLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSG 326
H +LK G+E N ++ ALLDMY KCG+ DA FD S D+V W ++I Y G
Sbjct: 576 EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHG 635
Query: 327 YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV-IN 385
KAL++ PN++T VLSA + G + G L +R G+E T
Sbjct: 636 EGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYV 695
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGA 445
+V + + + AR + E K P A+ S++S CA G
Sbjct: 696 CMVSLLGRAGRLNKARELIEKMPTK-----------------PAAIVWRSLLSGCAKAGN 738
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVG--TALLNFYAKCGDAQSARMVFDAMREKNTV 498
V+ L ++ + +LS G T L N YA G A+ V + M+ + V
Sbjct: 739 VE----LAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 188/387 (48%), Gaps = 37/387 (9%)
Query: 258 KLRA----LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
+LRA LH +HG I+ G+E++++L L+++Y + G + AR VF+++ +LV
Sbjct: 52 QLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLV 111
Query: 314 SWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLN--MGRMV 369
SW+ M+ G +++L +F + + D PN ++S + A + L M +
Sbjct: 112 SWSTMVSACNHHGIYEESLVVFLEFWRTRKD-SPNEYILSSFIQACSGLDGRGRWMVFQL 170
Query: 370 HSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------- 421
S ++ G + D V L+D Y K I AR +F+ EK + W ++ISG
Sbjct: 171 QSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRS 230
Query: 422 ----------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
++DNV PD L +V+SAC+ L ++ G +HA+ + G L + +
Sbjct: 231 YVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG-LEMDASLMNV 289
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ Y KCG +A +F+ M KN ++W+ ++ GY ++ LF+ M ++P+
Sbjct: 290 LIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPD 349
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEEALE 589
++IL++C+ +G G + K YV ++D+ A+ L +A +
Sbjct: 350 MYACSSILTSCASLHALGFGTQVH---AYTIKANLGNDSYVTNSLIDMYAKCDCLTDARK 406
Query: 590 FMENMPIEPDVSLFGAFLHGCGLYSRF 616
+ + DV LF A + G YSR
Sbjct: 407 VFD-IFAAADVVLFNAMIEG---YSRL 429
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 349/647 (53%), Gaps = 28/647 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDF 111
L+ S L HA +I+ G ND TKL G + YAR +F S+ PD
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 112 YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNF-VFSKVLKACCELRDIDEGMKVHC 170
+ F V++R + +N+ + + +RK N ++ + A RD G +H
Sbjct: 84 FLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHG 143
Query: 171 EIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ V V G DS +L G +V MY K + +R+VFD +K+ + W +MI+GY +N+
Sbjct: 144 QAV-VDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYV 202
Query: 229 EGLVLF-NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
E + +F + + E + TL ++ A A+L+ L G +H K G + +++T
Sbjct: 203 ESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF 262
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+ +Y KCG I+ ++F E D+V++ AMI GYT +G + +L LF + +
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFET 406
T+ S++ S G+L + +H ++ L +V AL +Y+K + I AR +F+
Sbjct: 323 STLVSLVPVS---GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE 379
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
+ EK + +WN++ISG N SP+ VT+ ++SACA LGA+ +G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+H + S++YV TAL+ YAKCG AR +FD M +KN VTW+ MI GYG+
Sbjct: 440 KWVHDL-VRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 498
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L +F +MLN + P V F +L ACSH G+V EG + F SM + F PS+K
Sbjct: 499 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 558
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HY CMVD+L RAG L+ AL+F+E M IEP S++ L C ++ +L + +K+ EL
Sbjct: 559 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 618
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
PD Y+VL+SN++++D + + VR+ K+R L+K+PG +L+++
Sbjct: 619 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 374 bits (959), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/614 (34%), Positives = 349/614 (56%), Gaps = 30/614 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRL---- 141
++M+ FG++ A VF M + +S+ V++ Y + + + C+ R+
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAM----CLYHRMLWVG 190
Query: 142 -KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSS 199
+ D + F VL+ C + D+ G +VH +V+ G D V+ L+ MY KC D+ S+
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 200 RQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL 259
R +FD ++++SW +MI+GY +N EGL LF MR V+ + +TL S+++AC L
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
G+ +H Y++ G ++ + +L MY+ G+ R+A +F + D+VSWT MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY + PDKA+ + P+ +T+A+VLSA A LG+L+ G +H L I+ L
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 380 DYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
Y ++ N L++MY+KC I A IF K+VI+W SII+GL N
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 426 ---VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDA 482
+ P+A+TL + ++ACA +GA+ G +HA+ + G + + ++ ALL+ Y +CG
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG-VGLDDFLPNALLDMYVRCGRM 549
Query: 483 QSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC 542
+A F++ ++K+ +W+ ++ GY +G G + LF M+ V+P+E+ F ++L C
Sbjct: 550 NTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 543 SHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSL 602
S + MV +G F M D+ P++KHY C+VDLL RAG L+EA +F++ MP+ PD ++
Sbjct: 609 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 603 FGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
+GA L+ C ++ + DLGE+ + + EL YY+L+ NLYA G+W V +VR +MK+
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 663 RGLSKSPGCSLVDL 676
GL+ GCS V++
Sbjct: 728 NGLTVDAGCSWVEV 741
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 121/435 (27%), Positives = 212/435 (48%), Gaps = 23/435 (5%)
Query: 218 IAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI 277
+ G N +E + L N M+E V ++ +LV C RA +G ++ L
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 278 EINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
+ L A L M+V+ GN+ DA VF ++ +L SW ++ GY + GY D+A+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 338 KKW-ADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCH 395
W P+ T VL + +L G+ VH +R G E D V+NAL+ MY KC
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVIS 438
+ AR +F+ +D+I+WN++ISG +N V PD +TL SVIS
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
AC LG ++G +HAY G + ++ V +L Y G + A +F M K+ V
Sbjct: 306 ACELLGDRRLGRDIHAYVITTG-FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIV 364
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM 558
+W+ MI GY ++ + M + V+P+E+ +LSAC+ G + G + + +
Sbjct: 365 SWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE-LHKL 423
Query: 559 CRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
+ + + ++++ ++ +++AL+ N+P + +S + + + G L +R
Sbjct: 424 AIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS-WTSIIAGLRLNNRCFE 482
Query: 619 GEVMIKKM-LELHPD 632
+ +++M + L P+
Sbjct: 483 ALIFLRQMKMTLQPN 497
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 235/658 (35%), Positives = 351/658 (53%), Gaps = 40/658 (6%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLT--NDKCNTKLVSMYGSFGHVKYARSVFDSMP 107
L+LL C + +L + H L+ LT + L +Y S V+ AR VFD +P
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIP 62
Query: 108 NPDF--YSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG 165
+P ++ +MIR Y ND + ++ Y M + + VLKAC LR ID+G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 166 MKVHCEI-VKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQN 224
+H + D +V T LVD YAKC ++ + +VFDE +++V+W +MI+G+ +
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 225 DCAQEGLVLFNRMREGFVEG---NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
C + + LF MR ++G N T+ + A + AL +GK +HGY ++G +
Sbjct: 183 CCLTDVIGLFLDMRR--IDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL 240
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLF----TD 337
+ T +LD+Y K I AR VFD + V+W+AMI GY ++ +A ++F +
Sbjct: 241 VVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVN 300
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHV 396
A P V I +L A+ G+L+ GR VH ++ G + D TV N ++ YAK
Sbjct: 301 DNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 397 IADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISA 439
+ DA F KDVI++NS+I+G N + PD TL+ V++A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C+ L A+ GSS H Y G + N + AL++ Y KCG A+ VFD M +++ V+
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGY-AVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVS 477
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMC 559
W+ M+ G+G+ G G +L+LF+ M V P+EV ILSACSH+G+V EG + F SM
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537
Query: 560 R-DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDL 618
R DF +P + HY CM DLLARAG L+EA +F+ MP EPD+ + G L C Y +L
Sbjct: 538 RGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAEL 597
Query: 619 GEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
G + KKM L VL+SN Y++ RW ++R + K+RGL K+PG S VD+
Sbjct: 598 GNEVSKKMQSLGETTES-LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/626 (33%), Positives = 348/626 (55%), Gaps = 38/626 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
LV++Y G VFD + + S+ +I + ++ +E ++CM E
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 146 NFVFSKVLKACCELRDIDEGM----KVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQ 201
+F V+ AC L + EG+ +VH ++ G +SF++ LV MY K + SS+
Sbjct: 199 SFTLVSVVTACSNL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKV 257
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRA 261
+ +++V+W ++++ QN+ E L M VE ++ T+ S++ AC+ L
Sbjct: 258 LLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 262 LHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
L GK LH Y LK G ++ NS + +AL+DMY C + R VFD + + W AMI
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 321 GYTQSGYPDKALKLFTD-KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE 379
GY+Q+ + +AL LF ++ A N T+A V+ A + G + +H ++ GL+
Sbjct: 378 GYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD 437
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----------------- 421
D V N L+DMY++ I A IF ++D++ WN++I+G
Sbjct: 438 RDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKM 497
Query: 422 --LDDNVS---------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGT 470
L+ VS P+++TL++++ +CA+L A+ G +HAY+ K L+++V VG+
Sbjct: 498 QNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAVGS 556
Query: 471 ALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQP 530
AL++ YAKCG Q +R VFD + +KN +TW+ +I YGM G+G ++ L M+ + V+P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 531 NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEF 590
NEV F ++ +ACSH+GMV EG + FY M D+ PS HY C+VDLL RAGR++EA +
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 591 MENMPIEPD-VSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
M MP + + + + L +++ ++GE+ + +++L P+ A +YVL++N+Y+S G
Sbjct: 677 MNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGL 736
Query: 650 WIRVNQVRELMKQRGLSKSPGCSLVD 675
W + +VR MK++G+ K PGCS ++
Sbjct: 737 WDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 232/476 (48%), Gaps = 36/476 (7%)
Query: 66 KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
K HA + G N LV+MYG G + ++ + S D ++ ++ N+
Sbjct: 222 KQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD--SFVL 183
+ +E+ + M E D F S VL AC L + G ++H +K G D SFV
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF-V 242
+ LVDMY C+ + S R+VFD D+ + W +MIAGY QN+ +E L+LF M E +
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
N T+ +V AC + A + + +HG+++K G++ + + L+DMY + G I A
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKAL-----------KLFTDKKWADFFPNHVTIA 351
+F ++ DLV+W MI GY S + + AL K+ PN +T+
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEK 410
++L + A L L G+ +H+ I+ L D V +ALVDMYAKC + +R +F+ +K
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK 581
Query: 411 DVIAWNSIIS--GLDDN---------------VSPDAVTLVSVISACASLGAVQVGSSL- 452
+VI WN II G+ N V P+ VT +SV +AC+ G V G +
Sbjct: 582 NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF 641
Query: 453 HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM-REKNTV-TWSAMIGG 506
+ G+ S+ + +++ + G + A + + M R+ N WS+++G
Sbjct: 642 YVMKPDYGVEPSSDHYA-CVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGA 696
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 143/507 (28%), Positives = 244/507 (48%), Gaps = 43/507 (8%)
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF-VLTGLVDMYAKCRDIGSSRQV 202
DN+ F +LKA +L+D++ G ++H + K G G DS V LV++Y KC D G+ +V
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKL--- 259
FD ++N VSW S+I+ + + L F M + VE + TL S+VTAC+ L
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 260 RALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
L GK +H Y L+ G E+NS ++ L+ MY K G + ++ + DLV+W ++
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL- 378
Q+ +AL+ + P+ TI+SVL A + L L G+ +H+ ++ G
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 379 -EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------ 425
E+ V +ALVDMY C + R +F+ ++ + WN++I+G N
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
+ ++ T+ V+ AC GA ++H + K+G L + +V L++ Y++
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRG-LDRDRFVQNTLMDMYSRL 453
Query: 480 GDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-----------V 528
G A +F M +++ VTW+ MI GY +L L M N E +
Sbjct: 454 GKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSL 513
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN + TIL +C+ + +G K ++ + +VD+ A+ G L+ +
Sbjct: 514 KPNSITLMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 589 EFMENMP----IEPDVSLFGAFLHGCG 611
+ + +P I +V + +HG G
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNG 599
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 195/408 (47%), Gaps = 33/408 (8%)
Query: 214 WTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYIL 273
W ++ V+++ +E ++ + M ++ + +L+ A A L+ + GK +H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 274 KIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
K G ++S V L+++Y KCG+ VFD + + VSW ++I + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLG---NLNMGRMVHSLGIRLGLEDYTVINALVD 389
+ F + P+ T+ SV++A + L L MG+ VH+ G+R G + +IN LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 390 MYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVT 432
MY K +A ++ + + +D++ WN+++S L N V PD T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 433 LVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
+ SV+ AC+ L ++ G LHAY+ K G L N +VG+AL++ Y C S R VFD M
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGE- 550
++ W+AMI GY +L LF M + N ++ AC +G
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 551 ----GWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
G+ + RD +FV + ++D+ +R G+++ A+ M
Sbjct: 425 EAIHGFVVKRGLDRD-RFVQN-----TLMDMYSRLGKIDIAMRIFGKM 466
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 361 bits (927), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 213/657 (32%), Positives = 349/657 (53%), Gaps = 35/657 (5%)
Query: 49 SIPCLNLLGLCKSTGSLKAFHAL-LIVDGLT------NDKCNTKLVSMYGSFGHVKYARS 101
+ PCL K+ +LK F + + D ++ N+ + L+ Y +G +
Sbjct: 140 TFPCL-----VKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194
Query: 102 VFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
+FD + D + VM+ Y +++ + MR + F VL C
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 162 IDEGMKVHCEIVKVGGPD--SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
ID G+++H +V V G D + L+ MY+KC + ++F + V+W MI+
Sbjct: 255 IDLGVQLH-GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GYVQ+ +E L F M V + IT SL+ + +K L K +H YI++ I +
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
+ L +AL+D Y KC + A+++F + S+D+V +TAMI GY +G +L++F
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIA 398
PN +T+ S+L L L +GR +H I+ G ++ I A++DMYAKC +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 399 DARYIFETTSEKDVIAWNSIISGLDDNVSP-----------------DAVTLVSVISACA 441
A IFE S++D+++WNS+I+ + +P D V++ + +SACA
Sbjct: 494 LAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 442 SLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWS 501
+L + G ++H + K L +S+VY + L++ YAKCG+ ++A VF M+EKN V+W+
Sbjct: 554 NLPSESFGKAIHGFMIKHSL-ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWN 612
Query: 502 AMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
++I G G SL LF +M+ + ++P+++ F I+S+C H G V EG + F SM
Sbjct: 613 SIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTE 672
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE 620
D+ P +HY C+VDL RAGRL EA E +++MP PD ++G L C L+ +L E
Sbjct: 673 DYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAE 732
Query: 621 VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
V K+++L P + YYVL+SN +A+ W V +VR LMK+R + K PG S ++++
Sbjct: 733 VASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 213/468 (45%), Gaps = 25/468 (5%)
Query: 149 FSKVLKACCELRDIDEGMKVHC-EIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
S +L+AC + +G +VH IV DS+ ++ MYA C ++F L
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF-YRL 96
Query: 208 D---KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
D ++ W S+I+ +V+N + L + +M V + T LV AC L+
Sbjct: 97 DLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKG 156
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
+L + +G++ N + ++L+ Y++ G I +FD + D V W M+ GY +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
G D +K F+ + PN VT VLS A +++G +H L + G++ + ++
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 384 INALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNV 426
N+L+ MY+KC DA +F S D + WN +ISG + V
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGV 336
Query: 427 SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
PDA+T S++ + + ++ +H Y + +S ++++ +AL++ Y KC A+
Sbjct: 337 LPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS-ISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F + V ++AMI GY G SL +F ++ ++ PNE+ +IL
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+ G + + F ++D+ A+ GR+ A E E +
Sbjct: 456 ALKLGRE-LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERL 502
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 359 bits (921), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 200/629 (31%), Positives = 344/629 (54%), Gaps = 23/629 (3%)
Query: 69 HALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H +I G+ +D T L+ MYG G++ A VFD MP D ++ ++ N
Sbjct: 124 HGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIV-KVGGPDSFVLTGL 186
+ +KCM E D V++ C EL + VH +I K+ D + L
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+ MY+KC D+ SS ++F++ KN VSWT+MI+ Y + + +++ L F+ M + +E N
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEIN-SHLVTALLDMYVKCGNIRDARSVFD 305
+TL S++++C + + +GK +HG+ ++ ++ N L AL+++Y +CG + D +V
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ ++V+W ++I Y G +AL LF P+ T+AS +SA G + +
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
G+ +H IR + D V N+L+DMY+K + A +F + V+ WNS++ G N
Sbjct: 424 GKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQN 483
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
+ + VT ++VI AC+S+G+++ G +H GL +++
Sbjct: 484 GNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL--KDLFT 541
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
TAL++ YAKCGD +A VF AM ++ V+WS+MI YGM G G +++ F+ M+
Sbjct: 542 DTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGT 601
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PNEV+F +LSAC H+G V EG K ++++ + F P+ +H+ C +DLL+R+G L+EA
Sbjct: 602 KPNEVVFMNVLSACGHSGSVEEG-KYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAY 660
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
++ MP D S++G+ ++GC ++ + D+ + + + ++ D YY L+SN+YA +G
Sbjct: 661 RTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEG 720
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
W ++R MK L K PG S +++D
Sbjct: 721 EWEEFRRLRSAMKSSNLKKVPGYSAIEID 749
Score = 268 bits (684), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 170/556 (30%), Positives = 297/556 (53%), Gaps = 35/556 (6%)
Query: 59 CKSTGSLKAFHALLIVDG-LTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQV 116
C S + HA L+V G L D TKL+ Y G +R VF++ P PD + + V
Sbjct: 11 CSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGV 70
Query: 117 MIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD-IDEGMKVHCEIVKV 175
+I+ L ++ Y + + FVF VL+AC R+ + G KVH I+K
Sbjct: 71 LIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKG 130
Query: 176 GGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
G D V+ T L+ MY + ++ + +VFD +++V+W+++++ ++N + L +F
Sbjct: 131 GVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMF 190
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC 294
M + VE + +T+ S+V CA+L L + +HG I + +++ L +LL MY KC
Sbjct: 191 KCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKC 250
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
G++ + +F+++ + VSWTAMI Y + + +KAL+ F++ + PN VT+ SVL
Sbjct: 251 GDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVL 310
Query: 355 SASAQLGNLNMGRMVHSLGIRLGLE-DYTVIN-ALVDMYAKCHVIADARYIFETTSEKDV 412
S+ +G + G+ VH +R L+ +Y ++ ALV++YA+C ++D + S++++
Sbjct: 311 SSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
Query: 413 IAWNSIIS------------GL-----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
+AWNS+IS GL + PDA TL S ISAC + G V +G +H +
Sbjct: 371 VAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGH 430
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGG 515
+ + S+ +V +L++ Y+K G SA VF+ ++ ++ VTW++M+ G+ G+
Sbjct: 431 VIRTDV--SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 516 SLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEG-W---KCFYSMCRDFKFVPSMKHY 571
+++LF M + ++ NEV F ++ ACS G + +G W K S +D F +
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL-FTDT---- 543
Query: 572 VCMVDLLARAGRLEEA 587
++D+ A+ G L A
Sbjct: 544 -ALIDMYAKCGDLNAA 558
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 130/267 (48%), Gaps = 4/267 (1%)
Query: 59 CKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
C++ G + K H +I ++++ L+ MY G V A +VF+ + + ++
Sbjct: 415 CENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 474
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
M+ + N + + + M E + F V++AC + +++G VH +++
Sbjct: 475 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 534
Query: 176 GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFN 235
G D F T L+DMYAKC D+ ++ VF +++VSW+SMI Y + + FN
Sbjct: 535 GLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFN 594
Query: 236 RMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
+M E + N++ ++++AC ++ +GK+ + G+ NS +D+ + G
Sbjct: 595 QMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSG 654
Query: 296 NIRDARSVFDELCSI-DLVSWTAMIVG 321
++++A E+ + D W +++ G
Sbjct: 655 DLKEAYRTIKEMPFLADASVWGSLVNG 681
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 439 ACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
+C+SL V S LHA+ G L + T L+ YA G S+R+VF+A ++
Sbjct: 10 SCSSLRLV---SQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 499 TWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
+ +I ++ L+ +++E Q ++ +F ++L AC+
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA 111
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 358 bits (918), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 183/531 (34%), Positives = 313/531 (58%), Gaps = 23/531 (4%)
Query: 167 KVHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H ++ +G S F++T L+ + DI +RQVFD+ + W ++I GY +N+
Sbjct: 39 QIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNN 98
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
Q+ L++++ M+ V + T L+ AC+ L L G+++H + ++G + + +
Sbjct: 99 HFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN 158
Query: 286 ALLDMYVKCGNIRDARSVFD--ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADF 343
L+ +Y KC + AR+VF+ L +VSWTA++ Y Q+G P +AL++F+ + D
Sbjct: 159 GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDV 218
Query: 344 FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARY 402
P+ V + SVL+A L +L GR +H+ +++GLE + ++ +L MYAKC +A A+
Sbjct: 219 KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKI 278
Query: 403 IFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
+F+ ++I WN++ISG ++ +V PD +++ S ISACA +G+
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGS 338
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
++ S++ Y + +V++ +AL++ +AKCG + AR+VFD +++ V WSAMI
Sbjct: 339 LEQARSMYEYVGRSDY-RDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GYG+ G +++L+ M V PN+V F +L AC+H+GMV EGW F M D K
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKIN 456
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P +HY C++DLL RAG L++A E ++ MP++P V+++GA L C + +LGE ++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ + P +YV +SNLYA+ W RV +VR MK++GL+K GCS V++
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Score = 252 bits (643), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 234/418 (55%), Gaps = 22/418 (5%)
Query: 54 NLLGLCKSTGSLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
+L+ LK HA L+V GL + TKL+ SFG + +AR VFD +P P +
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIF 85
Query: 113 SFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI 172
+ +IR Y N+ ++D + Y M+ D+F F +LKAC L + G VH ++
Sbjct: 86 PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145
Query: 173 VKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQE 229
++G D FV GL+ +YAKCR +GS+R VF+ ++ +VSWT++++ Y QN E
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 230 GLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLD 289
L +F++MR+ V+ + + L S++ A L+ L QG+ +H ++K+G+EI L+ +L
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 290 MYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVT 349
MY KCG + A+ +FD++ S +L+ W AMI GY ++GY +A+ +F + D P+ ++
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 350 IASVLSASAQLGNLNMGR-MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTS 408
I S +SA AQ+G+L R M +G +D + +AL+DM+AKC + AR +F+ T
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385
Query: 409 EKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
++DV+ W+++I G V P+ VT + ++ AC G V+ G
Sbjct: 386 DRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 355 bits (911), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 216/696 (31%), Positives = 368/696 (52%), Gaps = 35/696 (5%)
Query: 13 RTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCL-------NLLGLCKSTGSL 65
RT ++F+ + + Q ++F S+ + L +LL C S L
Sbjct: 3 RTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRL 62
Query: 66 K---AFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
+ H ++V+G ++D ++ LV++Y FG + +AR VF+ M D + MI Y
Sbjct: 63 SFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCY 122
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
+ + MR + + ++L E+ + +H V G D
Sbjct: 123 SRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYGFDCDI 179
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREG 240
V+ ++++Y KC +G ++ +FD+ +++VSW +MI+GY E L L RMR
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+ +Q T G+ ++ + L G+ LH I+K G +++ HL TAL+ MY+KCG +
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
V + + + D+V WT MI G + G +KAL +F++ + + IASV+++ AQL
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
G+ ++G VH +R G D +N+L+ MYAKC + + IFE +E+D+++WN+II
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 420 SGLDDNV------------------SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
SG NV D+ T+VS++ AC+S GA+ VG +H + +
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI 479
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFS 521
++ V TAL++ Y+KCG ++A+ FD++ K+ V+W +I GYG G G +L ++S
Sbjct: 480 RPCSL-VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYS 538
Query: 522 DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARA 581
+ L+ ++PN VIF +LS+CSH GMV +G K F SM RDF P+ +H C+VDLL RA
Sbjct: 539 EFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRA 598
Query: 582 GRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVS 641
R+E+A +F + P + + G L C + ++ +++ + M+EL P A +YV +
Sbjct: 599 KRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLG 658
Query: 642 NLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+ +A+ RW V++ M+ GL K PG S ++++
Sbjct: 659 HSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMN 694
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 354 bits (908), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 337/652 (51%), Gaps = 30/652 (4%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKC------NTKLVSMYGSFGHVKYARSVFDSM 106
++L+ C S+ SL I D + N C N ++SMYG G ++ AR VFD M
Sbjct: 71 ISLICACSSSRSLA--QGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 107 PNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGM 166
P + S+ +I Y N + + Y M + D F F ++KAC D+ G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 167 KVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
++H +++K+ + L+ MY + + + +VF K+++SW+S+IAG+ Q
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 226 CAQEGLVLFNRMRE-GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV 284
E L M G N+ GS + AC+ L G +HG +K + N+
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 285 TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
+L DMY +CG + AR VFD++ D SW +I G +GY D+A+ +F+ + + F
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYI 403
P+ +++ S+L A + L+ G +HS I+ G L D TV N+L+ MY C + +
Sbjct: 369 PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNL 428
Query: 404 FET-TSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGA 445
FE + D ++WN+I++ L PD +T+ +++ C + +
Sbjct: 429 FEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISS 488
Query: 446 VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIG 505
+++GS +H YS K GL + ++ L++ YAKCG AR +FD+M ++ V+WS +I
Sbjct: 489 LKLGSQVHCYSLKTGL-APEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIV 547
Query: 506 GYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFV 565
GY G G +L LF +M + ++PN V F +L+ACSH G+V EG K + +M +
Sbjct: 548 GYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGIS 607
Query: 566 PSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKK 625
P+ +H C+VDLLARAGRL EA F++ M +EPDV ++ L C L + +
Sbjct: 608 PTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAEN 667
Query: 626 MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+L++ P + +VL+ +++AS G W +R MK+ + K PG S ++++
Sbjct: 668 ILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIE 719
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 259/537 (48%), Gaps = 49/537 (9%)
Query: 124 NDLYKDIVEFYKCMRK------RLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG 177
++ Y++ +E + +K RL+ + ++ AC R + +G K+H I+
Sbjct: 44 SNFYREALEAFDFAQKNSSFKIRLR-----TYISLICACSSSRSLAQGRKIHDHILNSNC 98
Query: 178 P-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D+ + ++ MY KC + +R+VFD ++N+VS+TS+I GY QN E + L+ +
Sbjct: 99 KYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLK 158
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKC 294
M + + +Q GS++ ACA + GK LH ++K +E +SHL+ AL+ MYV+
Sbjct: 159 MLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAMYVRF 216
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK-KWADFFPNHVTIASV 353
+ DA VF + DL+SW+++I G++Q G+ +AL + + F PN S
Sbjct: 217 NQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSS 276
Query: 354 LSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDV 412
L A + L + G +H L I+ L + +L DMYA+C + AR +F+ D
Sbjct: 277 LKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDT 336
Query: 413 IAWNSIISGL------DDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAY 455
+WN II+GL D+ VS PDA++L S++ A A+ G +H+Y
Sbjct: 337 ASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSY 396
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGG 514
K G L +++ V +LL Y C D +F+ R ++V+W+ ++
Sbjct: 397 IIKWGFL-ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPV 455
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-- 572
L LF ML E +P+ + +L C + G + C K + + ++
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH---CYSLKTGLAPEQFIKN 512
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE---VMIKKM 626
++D+ A+ G L +A ++M DV + + G Y++ GE ++ K+M
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVG---YAQSGFGEEALILFKEM 565
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 353 bits (905), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 202/621 (32%), Positives = 325/621 (52%), Gaps = 90/621 (14%)
Query: 145 DNFVFSKVLKACCELRDIDEGMK-VHCEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQV 202
D+ F+K+L +C + + ++ VH ++K G + F+ L+D Y+KC + RQV
Sbjct: 18 DSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQV 77
Query: 203 FDETLDKNV-------------------------------VSWTSMIAGYVQNDCAQEGL 231
FD+ +N+ +W SM++G+ Q+D +E L
Sbjct: 78 FDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEAL 137
Query: 232 VLFNRM-REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDM 290
F M +EGFV N+ + S+++AC+ L +++G +H I K + ++ +AL+DM
Sbjct: 138 CYFAMMHKEGFVL-NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM 196
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
Y KCGN+ DA+ VFDE+ ++VSW ++I + Q+G +AL +F + P+ VT+
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 351 ASVLSASAQLGNLNMGRMVHSLGIRLG--LEDYTVINALVDMYAKCHVIADARYIFETT- 407
ASV+SA A L + +G+ VH ++ D + NA VDMYAKC I +AR+IF++
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 408 ------------------------------SEKDVIAWNSIISGLDDN------------ 425
+E++V++WN++I+G N
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 426 -----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL-----SSNVYVGTALLNF 475
V P + +++ ACA L + +G H + K G +++VG +L++
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 476 YAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIF 535
Y KCG + +VF M E++ V+W+AMI G+ G G +L LF +ML +P+ +
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 536 TTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+LSAC H G V EG F SM RDF P HY CMVDLL RAG LEEA +E MP
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 596 IEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQ 655
++PD ++G+ L C ++ LG+ + +K+LE+ P + YVL+SN+YA G+W V
Sbjct: 557 MQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMN 616
Query: 656 VRELMKQRGLSKSPGCSLVDL 676
VR+ M++ G++K PGCS + +
Sbjct: 617 VRKSMRKEGVTKQPGCSWIKI 637
Score = 226 bits (575), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 158/554 (28%), Positives = 268/554 (48%), Gaps = 98/554 (17%)
Query: 49 SIPCLNLLGLC-KSTGS---LKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVF 103
S P LL C KS S ++ HA +I G +N+ +L+ Y G ++ R VF
Sbjct: 19 SSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVF 78
Query: 104 DSMPNPDFYSFQVMI----RWYFLND---LYKDIVEFYKC----MRKRLKEHD------- 145
D MP + Y++ ++ + FL++ L++ + E +C M +HD
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 146 -------------NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDM 189
+ F+ VL AC L D+++G++VH I K P D ++ + LVDM
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK--SPFLSDVYIGSALVDM 196
Query: 190 YAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249
Y+KC ++ +++VFDE D+NVVSW S+I + QN A E L +F M E VE +++TL
Sbjct: 197 YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTL 256
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT-ALLDMYVKCGNIRDARSVFD--- 305
S+++ACA L A+ G+ +HG ++K N +++ A +DMY KC I++AR +FD
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 306 ----------------------------ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTD 337
++ ++VSW A+I GYTQ+G ++AL LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-------EDYTVINALVDM 390
K P H + A++L A A L L++G H ++ G +D V N+L+DM
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTL 433
Y KC + + +F E+D ++WN++I G L+ PD +T+
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITM 496
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+ V+SAC G V+ G + T+ ++ T +++ + G + A+ + + M
Sbjct: 497 IGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMP 556
Query: 494 -EKNTVTWSAMIGG 506
+ ++V W +++
Sbjct: 557 MQPDSVIWGSLLAA 570
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 352 bits (902), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 197/581 (33%), Positives = 313/581 (53%), Gaps = 60/581 (10%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGG-PDSFVLTGLVDMYA--KCRDIGSSRQVFDETLD 208
+++ C LR + + H +++ G D + + L M A + +R+VFDE
Sbjct: 36 LIERCVSLRQLKQ---THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 209 KNVVSWTSMIAGYVQN-DCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKW 267
N +W ++I Y D + + E N+ T L+ A A++ +L G+
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 268 LHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
LHG +K + + + +L+ Y CG++ A VF + D+VSW +MI G+ Q G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL--GIRLGLEDYTVIN 385
PDKAL+LF + D +HVT+ VLSA A++ NL GR V S R+ + + T+ N
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV-NLTLAN 271
Query: 386 ALVDMYAKCHVIADARYIFETTSEKD-------------------------------VIA 414
A++DMY KC I DA+ +F+ EKD ++A
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 415 WNSIISGLDDNVSPDA------------------VTLVSVISACASLGAVQVGSSLHAYS 456
WN++IS + N P+ +TLVS +SACA +GA+++G +H+Y
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
K G+ N +V +AL++ Y+KCGD + +R VF+++ +++ WSAMIGG M G G +
Sbjct: 392 KKHGI-RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 450
Query: 517 LALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVD 576
+ +F M V+PN V FT + ACSHTG+V E F+ M ++ VP KHY C+VD
Sbjct: 451 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 510
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
+L R+G LE+A++F+E MPI P S++GA L C +++ +L E+ ++LEL P
Sbjct: 511 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 570
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+VL+SN+YA G+W V+++R+ M+ GL K PGCS +++D
Sbjct: 571 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEID 611
Score = 230 bits (586), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 164/570 (28%), Positives = 269/570 (47%), Gaps = 97/570 (17%)
Query: 14 TKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLI 73
T +P R +++N PT + S H ++L+ C S LK H +I
Sbjct: 6 TAQPLSLPRHPNFSNPNQPTTN----NERSRH-------ISLIERCVSLRQLKQTHGHMI 54
Query: 74 VDGLTNDKCN-TKLVSMYG--SFGHVKYARSVFDSMPNPDFYSFQVMIR----------- 119
G +D + +KL +M SF ++YAR VFD +P P+ +++ +IR
Sbjct: 55 RTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLS 114
Query: 120 -WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
W FL D+V +C + + F ++KA E+ + G +H VK G
Sbjct: 115 IWAFL-----DMVSESQCYPNK------YTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG 163
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
D FV L+ Y C D+ S+ +VF +K+VVSW SMI G+VQ + L LF +M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
V+ + +T+ +++ACAK+R L G+ + YI + + +N L A+LDMY KCG+I
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 298 RDARSVFD-------------------------------ELCSIDLVSWTAMIVGYTQSG 326
DA+ +FD + D+V+W A+I Y Q+G
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 327 YPDKALKLFTDKKWADFFP-NHVTIASVLSASAQLGNLNMGRMVHSL----GIRLGLEDY 381
P++AL +F + + N +T+ S LSA AQ+G L +GR +HS GIR+ ++
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRM---NF 400
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DD 424
V +AL+ MY+KC + +R +F + ++DV W+++I GL +
Sbjct: 401 HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSL-HAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
NV P+ VT +V AC+ G V SL H + G++ + +++ + G +
Sbjct: 461 NVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYA-CIVDVLGRSGYLE 519
Query: 484 SARMVFDAMR-EKNTVTWSAMIGGYGMQGD 512
A +AM +T W A++G + +
Sbjct: 520 KAVKFIEAMPIPPSTSVWGALLGACKIHAN 549
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 209/637 (32%), Positives = 338/637 (53%), Gaps = 35/637 (5%)
Query: 69 HALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
HA I GL +N + LVSMY ++ A VF+++ + + MIR Y N
Sbjct: 350 HAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGES 409
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++E + M+ D+F F+ +L C D++ G + H I+K + FV L
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNAL 469
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
VDMYAKC + +RQ+F+ D++ V+W ++I YVQ++ E LF RM + +
Sbjct: 470 VDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDG 529
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
L S + AC + L+QGK +H +K G++ + H ++L+DMY KCG I+DAR VF
Sbjct: 530 ACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
L +VS A+I GY+Q+ ++A+ LF + P+ +T A+++ A + +L +G
Sbjct: 590 LPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG 648
Query: 367 RMVHSLGIRLGLE---DYTVINALVDMYAKCHVIADARYIF-ETTSEKDVIAWNSIISGL 422
H + G +Y I +L+ MY + +A +F E +S K ++ W ++SG
Sbjct: 649 TQFHGQITKRGFSSEGEYLGI-SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 423 DDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHA--YSTKQGL-- 461
N V PD T V+V+ C+ L +++ G ++H+ + L
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALF 520
L+SN L++ YAKCGD + + VFD MR + N V+W+++I GY G +L +F
Sbjct: 768 LTSNT-----LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLAR 580
M + P+E+ F +L+ACSH G V +G K F M + + H CMVDLL R
Sbjct: 823 DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGR 882
Query: 581 AGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLV 640
G L+EA +F+E ++PD L+ + L C ++ GE+ +K++EL P + YVL+
Sbjct: 883 WGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLL 942
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
SN+YAS G W + N +R++M+ RG+ K PG S +D++
Sbjct: 943 SNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVE 979
Score = 232 bits (592), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 175/663 (26%), Positives = 318/663 (47%), Gaps = 110/663 (16%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
KA H+ ++ G+ ++ + +V +Y V YA FD + + W +
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD-------VTAWNSML 132
Query: 125 DLYKDIVEFYKCMRKRLKEHDN------FVFSKVLKACCELRDIDEGMKVHCEIVKVG-G 177
+Y I + K +R + +N F FS VL C +++ G ++HC ++K+G
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLE 192
Query: 178 PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
+S+ LVDMYAKC I +R+VF+ +D N V WT + +GYV+ +E +++F RM
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERM 252
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
R+ EG++ + VT +++ Y++ G +
Sbjct: 253 RD---EGHRPDHLAFVT--------------------------------VINTYIRLGKL 277
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+DAR +F E+ S D+V+W MI G+ + G A++ F + + + T+ SVLSA
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 358 AQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ NL++G +VH+ I+LGL + V ++LV MY+KC + A +FE EK+ + WN
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I G N + D T S++S CA+ +++GS H+ K+
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
L+ N++VG AL++ YAKCG + AR +F+ M +++ VTW+ +IG Y + + L
Sbjct: 458 K-LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK--CFYSMC---RDFKFVPSMKHYVCM 574
F M + + + L AC+H + +G + C C RD S +
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSS------L 570
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGE--VMIKKMLE--LH 630
+D+ ++ G +++A + ++P E V A + G YS+ +L E V+ ++ML ++
Sbjct: 571 IDMYSKCGIIKDARKVFSSLP-EWSVVSMNALIAG---YSQNNLEEAVVLFQEMLTRGVN 626
Query: 631 PDKACYYVLVSNL--------------------YASDGRWIRVNQVRELMKQRGLSKSPG 670
P + + +V ++S+G ++ ++ + M RG++++
Sbjct: 627 PSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEA-- 684
Query: 671 CSL 673
C+L
Sbjct: 685 CAL 687
Score = 228 bits (580), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 185/656 (28%), Positives = 294/656 (44%), Gaps = 97/656 (14%)
Query: 66 KAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
+ H +I GL N C LV MY + AR VF+ + +P+ + + Y
Sbjct: 180 RQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT 184
L ++ V ++ MR DEG + PD
Sbjct: 240 GLPEEAVLVFERMR------------------------DEGHR----------PDHLAFV 265
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
+++ Y + + +R +F E +VV+W MI+G+ + C + F MR+ V+
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
+ TLGS+++A + L G +H +K+G+ N ++ ++L+ MY KC + A VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
+ L + V W AMI GY +G K ++LF D K + + + T S+LS A +L
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 365 MGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
MG HS+ I+ L ++ V NALVDMYAKC + DAR IFE ++D + WN+II
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 423 -DDNVSP---------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNV 466
D+N S D L S + AC + + G +H S K G L ++
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG-LDRDL 564
Query: 467 YVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNE 526
+ G++L++ Y+KCG + AR VF ++ E + V+ +A+I GY Q + ++ LF +ML
Sbjct: 565 HTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTR 623
Query: 527 EVQPNEVIFTTILSAC----------------SHTGMVGEGWKCFYSM------------ 558
V P+E+ F TI+ AC + G EG S+
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTE 683
Query: 559 -CRDFKFVPSMKHYVCMVDLL---ARAGRLEEALEFMENMP---IEPDVSLFGAFLHGCG 611
C F + S K V ++ ++ G EEAL+F + M + PD + F L C
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 612 LYSRFDLGEVMIKKMLELHPDKACYYVLVSN----LYASDGRWIRVNQVRELMKQR 663
+ S G + + L D L SN +YA G +QV + M++R
Sbjct: 744 VLSSLREGRAIHSLIFHLAHD---LDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 262/537 (48%), Gaps = 67/537 (12%)
Query: 165 GMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
G VH + + +G + + +VD+YAKC + + + FD L+K+V +W SM++ Y
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMY-- 135
Query: 224 NDCAQEGLVL--FNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINS 281
+ + G VL F + E + N+ T +++ CA+ + G+ +H ++K+G+E NS
Sbjct: 136 SSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS 195
Query: 282 HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWA 341
+ AL+DMY KC I DAR VF+ + + V WT + GY ++G P++A+ +F +
Sbjct: 196 YCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE 255
Query: 342 DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADAR 401
P+H+ +V++ +LG L DAR
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLK----------------------------------DAR 281
Query: 402 YIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLG 444
+F S DV+AWN +ISG +V TL SV+SA +
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+ +G +HA + K G L+SN+YVG++L++ Y+KC ++A VF+A+ EKN V W+AMI
Sbjct: 342 NLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMI 400
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GY G+ + LF DM + ++ FT++LS C+ + + G + F+S+ K
Sbjct: 401 RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKL 459
Query: 565 VPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV---SLFGAFLHGCGLYSRFDLGEV 621
++ +VD+ A+ G LE+A + E M +V ++ G+++ FDL +
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 622 MIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKS--PGCSLVDL 676
M + + D AC + G + + QV L + GL + G SL+D+
Sbjct: 520 M--NLCGIVSDGACLASTLKACTHVHGLY-QGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 132/282 (46%), Gaps = 21/282 (7%)
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
AL GK +H L +GI+ L A++D+Y KC + A FD L D+ +W +M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED 380
Y+ G P K L+ F FPN T + VLS A+ N+ GR +H I++GLE
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 381 YTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISA 439
+ ALVDMYAKC I+DAR +FE + + + W + SG P+ LV
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV----- 248
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
+G ++ T ++N Y + G + AR++F M + V
Sbjct: 249 -------------FERMRDEGHRPDHLAFVT-VINTYIRLGKLKDARLLFGEMSSPDVVA 294
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
W+ MI G+G +G ++ F +M V+ ++LSA
Sbjct: 295 WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 349 bits (895), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 212/696 (30%), Positives = 371/696 (53%), Gaps = 48/696 (6%)
Query: 17 PKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALL--IV 74
P L F+S + P + T++S L C T +LKA A+ ++
Sbjct: 86 PHEALLFYSRMKKTAPFTNCDAYTYSS-----------TLKACAETKNLKAGKAVHCHLI 134
Query: 75 DGLTNDK--CNTKLVSMYGSFGHVK------YARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
L N + L++MY S + R VFD+M + ++ +I WY
Sbjct: 135 RCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGR 194
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP---DSFVL 183
+ + M + + F V A R I + + ++K+G D FV+
Sbjct: 195 NAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVV 254
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF-NRMREGFV 242
+ + MYA+ DI SSR+VFD +++N+ W +MI YVQNDC E + LF + +
Sbjct: 255 SSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEI 314
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+++T +A + L+ + G+ HG++ K E+ +V +L+ MY +CG++ +
Sbjct: 315 VSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFG 374
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
VF + D+VSW MI + Q+G D+ L L + + F +++T+ ++LSA++ L N
Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRN 434
Query: 363 LNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETT--SEKDVIAWNSIIS 420
+G+ H+ IR G++ + + L+DMY+K +I ++ +FE + +E+D WNS+IS
Sbjct: 435 KEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMIS 494
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G L+ N+ P+AVT+ S++ AC+ +G+V +G LH +S +Q L
Sbjct: 495 GYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ-YLD 553
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
NV+V +AL++ Y+K G + A +F +E+N+VT++ MI GYG G G +++LF M
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
++P+ + F +LSACS++G++ EG K F M + PS +HY C+ D+L R GR
Sbjct: 614 QESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGR 673
Query: 584 LEEALEFMENMPIEPDVS-LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK--ACYYVLV 640
+ EA EF++ + E +++ L+G+ L C L+ +L E + +++ + K + Y VL+
Sbjct: 674 VNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLL 733
Query: 641 SNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
SN+YA + +W V++VR M+++GL K G S +++
Sbjct: 734 SNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEI 769
Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 165/639 (25%), Positives = 291/639 (45%), Gaps = 74/639 (11%)
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR--LKEHDNFVFSK 151
G+ + AR +FD++P P + +I + N+L + + FY M+K D + +S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 152 VLKACCELRDIDEGMKVHCEIVK-VGGPDSFVLTGLVDMYAKCRDIGSS------RQVFD 204
LKAC E +++ G VHC +++ + V L++MY C + R+VFD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
KNVV+W ++I+ YV+ E F M V+ + ++ ++ A + R++ +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 265 GKWLHGYILKIGIEINSHL--VTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
+G +LK+G E L V++ + MY + G+I +R VFD ++ W MI Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 323 TQSGYPDKALKLFTDKKWA-DFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Q+ ++++LF + + + + VT SA + L + +GR H + E
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS-----GLDDN---------- 425
++N+L+ MY++C + + +F + E+DV++WN++IS GLDD
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
D +T+ +++SA ++L ++G HA+ +QG+ + + L++ Y+K G +
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG--MNSYLIDMYSKSGLIR 470
Query: 484 SARMVFD--AMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
++ +F+ E++ TW++MI GY G + +F ML + ++PN V +IL A
Sbjct: 471 ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPA 530
Query: 542 CSHTGMVGEGWKC---------------------FYSMCRDFKFVPSM---------KHY 571
CS G V G + YS K+ M Y
Sbjct: 531 CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTY 590
Query: 572 VCMVDLLARAGRLEEALEF---MENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
M+ + G E A+ M+ I+PD F A L C D G + ++M E
Sbjct: 591 TTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMRE 650
Query: 629 LH---PDKACYYVLVSNLYASDGRWIRVNQVRELMKQRG 664
++ P Y + L GR RVN+ E +K G
Sbjct: 651 VYNIQPSSEHYCCITDML----GRVGRVNEAYEFVKGLG 685
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 215/642 (33%), Positives = 347/642 (54%), Gaps = 35/642 (5%)
Query: 66 KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMP---NPDFYSFQVMIRWY 121
K HA LI + D L+S+Y G A VF++M D S+ M+ Y
Sbjct: 82 KLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 122 FLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
N D ++ F + + L +D + ++ V++AC + G ++K G +S
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPND-YCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 181 FVLTG--LVDMYAKCRD-IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
V G L+DM+ K + ++ +VFD+ + NVV+WT MI +Q +E + F M
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKC--- 294
E ++ TL S+ +ACA+L L GK LH + ++ G+ + +L+DMY KC
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV--DDVECSLVDMYAKCSAD 318
Query: 295 GNIRDARSVFDELCSIDLVSWTAMIVGYTQS-GYPDKALKLFTDK-KWADFFPNHVTIAS 352
G++ D R VFD + ++SWTA+I GY ++ +A+ LF++ PNH T +S
Sbjct: 319 GSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSS 378
Query: 353 VLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKD 411
A L + +G+ V + GL + +V N+++ M+ K + DA+ FE+ SEK+
Sbjct: 379 AFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
Query: 412 VIAWNSIISGLDDNVSPD-----------------AVTLVSVISACASLGAVQVGSSLHA 454
++++N+ + G N++ + A T S++S A++G+++ G +H+
Sbjct: 439 LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHS 498
Query: 455 YSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGG 514
K GL S N V AL++ Y+KCG +A VF+ M +N ++W++MI G+ G
Sbjct: 499 QVVKLGL-SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 515 GSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCM 574
L F+ M+ E V+PNEV + ILSACSH G+V EGW+ F SM D K P M+HY CM
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 575 VDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKA 634
VDLL RAG L +A EF+ MP + DV ++ FL C ++S +LG++ +K+LEL P++
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 635 CYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
Y+ +SN+YA G+W ++R MK+R L K GCS +++
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 253/507 (49%), Gaps = 41/507 (8%)
Query: 138 RKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDI 196
R ++ D+ FS +LK+C RD G VH +++ PDS + L+ +Y+K D
Sbjct: 54 RDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS 113
Query: 197 GSSRQVFDETL----DKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSL 252
+ VF ET+ ++VVSW++M+A Y N + + +F E + N ++
Sbjct: 114 AKAEDVF-ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAV 172
Query: 253 VTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGN-IRDARSVFDELCSI 310
+ AC+ + G+ G+++K G E + + +L+DM+VK N +A VFD++ +
Sbjct: 173 IRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSEL 232
Query: 311 DLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVH 370
++V+WT MI Q G+P +A++ F D + F + T++SV SA A+L NL++G+ +H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 371 SLGIRLGLEDYTVINALVDMYAKCHV---IADARYIFETTSEKDVIAWNSIISGLDDN-- 425
S IR GL D V +LVDMYAKC + D R +F+ + V++W ++I+G N
Sbjct: 293 SWAIRSGLVD-DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCN 351
Query: 426 -----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
V P+ T S AC +L +VG + + K+G L+SN V
Sbjct: 352 LATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG-LASNSSV 410
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
++++ + K + A+ F+++ EKN V+++ + G + + L S++ E+
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLLARAGRLEE 586
+ F ++LS ++ G + +G + + K S VC ++ + ++ G ++
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQV---VKLGLSCNQPVCNALISMYSKCGSIDT 527
Query: 587 A---LEFMENMPIEPDVSLFGAFL-HG 609
A FMEN + S+ F HG
Sbjct: 528 ASRVFNFMENRNVISWTSMITGFAKHG 554
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
Query: 511 GDGGGSLALFSDMLNEEVQP-NEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
GD G+++ M + ++P + V F+++L +C G K ++ +F P
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLG-KLVHARLIEFDIEPDSV 98
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPI--EPDVSLFGAFLHGCGLYSR-FDLGEVMIKKM 626
Y ++ L +++G +A + E M + DV + A + G R D +V ++ +
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL 158
Query: 627 -LELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP--GCSLVDLDIANDFS 683
L L P+ CY ++ SD + + LMK GCSL+D+ + + S
Sbjct: 159 ELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENS 218
Query: 684 F 684
F
Sbjct: 219 F 219
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 347 bits (889), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 208/664 (31%), Positives = 349/664 (52%), Gaps = 36/664 (5%)
Query: 36 ELD-QTFASFHSLPSIPCLNLLGLCKSTGSLKAFHALLIVDGLTND-KCNTKLVSMYGSF 93
E+D F+S + + C L G + H I G +D T LV Y
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFG--------RQLHCQCIKFGFLDDVSVGTSLVDTYMKG 141
Query: 94 GHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVL 153
+ K R VFD M + ++ +I Y N + +++ + M+ + ++F F+ L
Sbjct: 142 SNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL 201
Query: 154 KACCELRDIDEGMKVHCEIVKVGGPDSF-VLTGLVDMYAKCRDIGSSRQVFDETLDKNVV 212
E G++VH +VK G + V L+++Y KC ++ +R +FD+T K+VV
Sbjct: 202 GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVV 261
Query: 213 SWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
+W SMI+GY N E L +F MR +V ++ + S++ CA L+ L + LH +
Sbjct: 262 TWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-CSIDLVSWTAMIVGYTQSGYPDKA 331
+K G + ++ TAL+ Y KC + DA +F E+ C ++VSWTAMI G+ Q+ ++A
Sbjct: 322 VKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEA 381
Query: 332 LKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDM 390
+ LF++ K PN T + +L+A + VH+ ++ E TV AL+D
Sbjct: 382 VDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDA 437
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN-----------------VSPDAVTL 433
Y K + +A +F +KD++AW+++++G + P+ T
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTF 497
Query: 434 VSVISACASLGA-VQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAM 492
S+++ CA+ A + G H ++ K L S++ V +ALL YAK G+ +SA VF
Sbjct: 498 SSILNVCAATNASMGQGKQFHGFAIKS-RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 493 REKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGW 552
REK+ V+W++MI GY G +L +F +M +V+ + V F + +AC+H G+V EG
Sbjct: 557 REKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGE 616
Query: 553 KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
K F M RD K P+ +H CMVDL +RAG+LE+A++ +ENMP +++ L C +
Sbjct: 617 KYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRV 676
Query: 613 YSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCS 672
+ + +LG + +K++ + P+ + YVL+SN+YA G W +VR+LM +R + K PG S
Sbjct: 677 HKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYS 736
Query: 673 LVDL 676
+++
Sbjct: 737 WIEV 740
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 218/455 (47%), Gaps = 37/455 (8%)
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
++ +FD++ ++ S+ S++ G+ ++ QE LF + +E + S++ A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTA 317
L G+ LH +K G + + T+L+D Y+K N +D R VFDE+ ++V+WT
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 318 MIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
+I GY ++ D+ L LF + PN T A+ L A+ G G VH++ ++ G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 378 LED-YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------- 425
L+ V N+L+++Y KC + AR +F+ T K V+ WNS+ISG N
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 426 ------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKC 479
V + SVI CA+L ++ LH K G L + TAL+ Y+KC
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ-NIRTALMVAYSKC 343
Query: 480 GDAQSARMVFDAMR-EKNTVTWSAMIGGYGMQGDGG-GSLALFSDMLNEEVQPNEVIFTT 537
A +F + N V+W+AMI G+ +Q DG ++ LFS+M + V+PNE ++
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGF-LQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 538 ILSA---CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
IL+A S + + + K Y S ++D + G++EEA + +
Sbjct: 403 ILTALPVISPSEVHAQVVKTNYER--------SSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
+ D+ + A L G Y++ E IK EL
Sbjct: 455 D-DKDIVAWSAMLAG---YAQTGETEAAIKMFGEL 485
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 19/271 (7%)
Query: 292 VKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIA 351
V + +A ++FD+ D S+ +++ G+++ G +A +LF + + +
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 352 SVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEK 410
SVL SA L + GR +H I+ G L+D +V +LVD Y K D R +F+ E+
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 411 DVIAWNSIISG-----LDDNV------------SPDAVTLVSVISACASLGAVQVGSSLH 453
+V+ W ++ISG ++D V P++ T + + A G G +H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 454 AYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDG 513
K G L + V +L+N Y KCG+ + AR++FD K+ VTW++MI GY G
Sbjct: 218 TVVVKNG-LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 514 GGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
+L +F M V+ +E F +++ C++
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 347 bits (889), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 213/643 (33%), Positives = 347/643 (53%), Gaps = 24/643 (3%)
Query: 66 KAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPN-PDFYSFQVMIRWYFL 123
K H ++ + L D T L+ MY FG A VF + + + + VMI +
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 124 NDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFV 182
+ + + ++ Y + + + F+ L AC + + G ++HC++VK+G D +V
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 183 LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFV 242
T L+ MY+KC +G + VF +DK + W +M+A Y +ND L LF MR+ V
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ TL ++++ C+ L + GK +H + K I+ S + +ALL +Y KCG DA
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD--FFPNHVTIASVLSASAQL 360
VF + D+V+W ++I G ++G +ALK+F D K D P+ + SV +A A L
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 361 GNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
L G VH I+ GL + V ++L+D+Y+KC + A +F + S ++++AWNS+I
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 420 SG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLL 462
S L + PD+V++ SV+ A +S ++ G SLH Y+ + G+
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGI- 608
Query: 463 SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSD 522
S+ ++ AL++ Y KCG ++ A +F M+ K+ +TW+ MI GYG GD +L+LF +
Sbjct: 609 PSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDE 668
Query: 523 MLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAG 582
M P++V F +++SAC+H+G V EG F M +D+ P+M+HY MVDLL RAG
Sbjct: 669 MKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAG 728
Query: 583 RLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSN 642
LEEA F++ MPIE D S++ L + +LG + +K+L + P++ YV + N
Sbjct: 729 LLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLIN 788
Query: 643 LYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLDIANDFSFS 685
LY G ++ LMK++GL K PGCS +++ + FS
Sbjct: 789 LYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFS 831
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 197/673 (29%), Positives = 321/673 (47%), Gaps = 57/673 (8%)
Query: 33 TQHELDQTF-ASFHSLPSIPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK-CNTKLV 87
++H+ F S + PS LL C + +L K H ++V G D T LV
Sbjct: 48 SKHDGSSPFWTSVFTFPS-----LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLV 102
Query: 88 SMYGSFGHVKYARSVFDSMPNP-------DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKR 140
+MY G + YA VFD D + MI YF +K+ V ++ M
Sbjct: 103 NMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVF 162
Query: 141 LKEHDNFVFSKVLKACCELRDI--DEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
D F S V+ C+ + +EG ++H +++ DSF+ T L+DMY K
Sbjct: 163 GVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSI 222
Query: 198 SSRQVFDETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ +VF E DK NVV W MI G+ + + L L+ + V+ + + AC
Sbjct: 223 DAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGAC 282
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
++ G+ +H ++K+G+ + ++ T+LL MY KCG + +A +VF + L W
Sbjct: 283 SQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWN 342
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
AM+ Y ++ Y AL LF + P+ T+++V+S + LG N G+ VH+ +
Sbjct: 343 AMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR 402
Query: 377 GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------- 422
++ + I +AL+ +Y+KC DA +F++ EKD++AW S+ISGL
Sbjct: 403 PIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVF 462
Query: 423 ------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
DD++ PD+ + SV +ACA L A++ G +H K GL+ NV+VG++L++ Y
Sbjct: 463 GDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV-LNVFVGSSLIDLY 521
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
+KCG + A VF +M +N V W++MI Y S+ LF+ ML++ + P+ V T
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV-CMVDLLARAGRLEEALEFMENMP 595
++L A S T + +G K + +PS H ++D+ + G + A + M
Sbjct: 582 SVLVAISSTASLLKG-KSLHGYTLRLG-IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ 639
Query: 596 ----IEPDVSLFGAFLHG--CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGR 649
I ++ ++G HG S FD +KK E PD + L+S S G
Sbjct: 640 HKSLITWNLMIYGYGSHGDCITALSLFD----EMKKAGE-SPDDVTFLSLISACNHS-GF 693
Query: 650 WIRVNQVRELMKQ 662
+ E MKQ
Sbjct: 694 VEEGKNIFEFMKQ 706
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 137/309 (44%), Gaps = 35/309 (11%)
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRM 368
I S + I Q G +AL L++ + F+ + T S+L A + L NL+ G+
Sbjct: 22 ISPASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKT 81
Query: 369 VHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSE-------KDVIAWNSIIS 420
+H + LG D + +LV+MY KC + A +F+ S+ +DV WNS+I
Sbjct: 82 IHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMID 141
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAV--QVGSSLHAYSTKQGL 461
G L V PDA +L V+S G + G +H + +
Sbjct: 142 GYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNS- 200
Query: 462 LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK-NTVTWSAMIGGYGMQGDGGGSLALF 520
L ++ ++ TAL++ Y K G + A VF + +K N V W+ MI G+G G SL L+
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 521 SDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC--MVDLL 578
N V+ FT L ACS + G G + C K YVC ++ +
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIH---CDVVKMGLHNDPYVCTSLLSMY 317
Query: 579 ARAGRLEEA 587
++ G + EA
Sbjct: 318 SKCGMVGEA 326
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 207/647 (31%), Positives = 327/647 (50%), Gaps = 26/647 (4%)
Query: 54 NLLGLCKSTGSLK---AFHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPN 108
++L CK SL+ H L++ G ++D CN LVS+Y G++ A +F +M
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA-LVSLYFHLGNLISAEHIFSNMSQ 351
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKV 168
D ++ +I + +E +K M E D+ + ++ AC + G ++
Sbjct: 352 RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Query: 169 HCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCA 227
H K+G + + G L+++YAKC DI ++ F ET +NVV W M+ Y D
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 228 QEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTAL 287
+ +F +M+ + NQ T S++ C +L L G+ +H I+K ++N+++ + L
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 288 LDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNH 347
+DMY K G + A + D+VSWT MI GYTQ + DKAL F +
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 591
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
V + + +SA A L L G+ +H+ G D NALV +Y++C I ++ FE
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 407 TSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAVQVG 449
T D IAWN+++SG + + + T S + A + ++ G
Sbjct: 652 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711
Query: 450 SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGM 509
+HA TK G S V AL++ YAKCG A F + KN V+W+A+I Y
Sbjct: 712 KQVHAVITKTGY-DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSK 770
Query: 510 QGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMK 569
G G +L F M++ V+PN V +LSACSH G+V +G F SM ++ P +
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 570 HYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL 629
HYVC+VD+L RAG L A EF++ MPI+PD ++ L C ++ ++GE +LEL
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLEL 890
Query: 630 HPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
P+ + YVL+SNLYA +W + R+ MK++G+ K PG S +++
Sbjct: 891 EPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/559 (28%), Positives = 271/559 (48%), Gaps = 30/559 (5%)
Query: 55 LLGLCKSTGSL---KAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMPNPD 110
L G K+ GSL + H+ ++ GL ++ C + KL Y G + A VFD MP
Sbjct: 91 LEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERT 150
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKAC---CELRDIDEGMK 167
+++ MI+ +L ++ + M + FS VL+AC D+ E +
Sbjct: 151 IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE--Q 208
Query: 168 VHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H I+ G DS V+ L+D+Y++ + +R+VFD K+ SW +MI+G +N+C
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E + LF M + S+++AC K+ +L G+ LHG +LK+G ++++ A
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+ +Y GN+ A +F + D V++ +I G +Q GY +KA++LF P+
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFE 405
T+AS++ A + G L G+ +H+ +LG I AL+++YAKC I A F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 406 TTSEKDVIAWNSIISG---LDD--------------NVSPDAVTLVSVISACASLGAVQV 448
T ++V+ WN ++ LDD + P+ T S++ C LG +++
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLEL 508
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +H+ K N YV + L++ YAK G +A + K+ V+W+ MI GY
Sbjct: 509 GEQIHSQIIKTN-FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
+L F ML+ ++ +EV T +SAC+ + EG + C F +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 626
Query: 569 KHYVCMVDLLARAGRLEEA 587
+V L +R G++EE+
Sbjct: 627 PFQNALVTLYSRCGKIEES 645
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 342 bits (876), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 208/620 (33%), Positives = 332/620 (53%), Gaps = 29/620 (4%)
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
+ +++ Y FG + YA +FD MP D S+ MI Y +D + CM++
Sbjct: 38 SNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGS 97
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQ 201
+ D + FS++LK ++ D G +VH ++K G + +V + LVDMYAKC + + +
Sbjct: 98 DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFE 157
Query: 202 VFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFVEGNQITLGSLVTACAKLR 260
F E + N VSW ++IAG+VQ + L M + V + T L+T
Sbjct: 158 AFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPM 217
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC-SIDLVSWTAMI 319
+ K +H +LK+G++ + A++ Y CG++ DA+ VFD L S DL+SW +MI
Sbjct: 218 FCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMI 277
Query: 320 VGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG 377
G+++ + A +LF + W + + T +LSA + + G+ +H + I+ G
Sbjct: 278 AGFSKHELKESAFELFIQMQRHWVE--TDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG 335
Query: 378 LEDYT-VINALVDMYAK--CHVIADARYIFETTSEKDVIAWNSIISGL-DDNVSPDAVTL 433
LE T NAL+ MY + + DA +FE+ KD+I+WNSII+G +S DAV
Sbjct: 336 LEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKF 395
Query: 434 VS----------------VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
S ++ +C+ L +Q+G +HA +TK G +S N +V ++L+ Y+
Sbjct: 396 FSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVS-NEFVISSLIVMYS 454
Query: 478 KCGDAQSARMVFDAMREKN-TVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
KCG +SAR F + K+ TV W+AMI GY G G SL LFS M N+ V+ + V FT
Sbjct: 455 KCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFT 514
Query: 537 TILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPI 596
IL+ACSHTG++ EG + M +K P M+HY VDLL RAG + +A E +E+MP+
Sbjct: 515 AILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPL 574
Query: 597 EPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQV 656
PD + FL C ++ + +LE+ P+ YV +S++Y+ +W V
Sbjct: 575 NPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASV 634
Query: 657 RELMKQRGLSKSPGCSLVDL 676
+++MK+RG+ K PG S +++
Sbjct: 635 KKMMKERGVKKVPGWSWIEI 654
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 339 bits (870), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 205/641 (31%), Positives = 338/641 (52%), Gaps = 34/641 (5%)
Query: 67 AFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
A H L++ GL D LVS YG+ G V A +FD MP + S+ MIR + N
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSK-------VLKACCELRDIDEGMKVHCEIVKVGGP 178
+ E + + + ++E+ + F VL C R+I G VH VK+
Sbjct: 268 FSE---ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 179 DSFVLT-GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
VL L+DMY+KC I +++ +F +KNVVSW +M+ G+ + +M
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 238 REGF--VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
G V+ +++T+ + V C L K LH Y LK N + A + Y KCG
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCG 444
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
++ A+ VF + S + SW A+I G+ QS P +L K + P+ T+ S+LS
Sbjct: 445 SLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLS 504
Query: 356 ASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
A ++L +L +G+ VH IR LE D V +++ +Y C + + +F+ +K +++
Sbjct: 505 ACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 415 WNSIISGLDDNVSPD-----------------AVTLVSVISACASLGAVQVGSSLHAYST 457
WN++I+G N PD ++++ V AC+ L ++++G HAY+
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K LL + ++ +L++ YAK G + VF+ ++EK+T +W+AMI GYG+ G ++
Sbjct: 625 KH-LLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAI 683
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDL 577
LF +M P+++ F +L+AC+H+G++ EG + M F P++KHY C++D+
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 578 LARAGRLEEALEFM-ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACY 636
L RAG+L++AL + E M E DV ++ + L C ++ ++GE + K+ EL P+K
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803
Query: 637 YVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
YVL+SNLYA G+W V +VR+ M + L K GCS ++L+
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 844
Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 248/492 (50%), Gaps = 27/492 (5%)
Query: 78 TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVE-FYKC 136
+D T++++MY G +R VFD++ + + + + +I Y N+LY +++E F +
Sbjct: 118 NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEM 177
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRD 195
+ D+F + V+KAC + D+ G+ VH +VK G D FV LV Y
Sbjct: 178 ISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGF 237
Query: 196 IGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG----NQITLGS 251
+ + Q+FD ++N+VSW SMI + N ++E +L M E +G + TL +
Sbjct: 238 VTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
++ CA+ R + GK +HG+ +K+ ++ L AL+DMY KCG I +A+ +F + +
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 357
Query: 312 LVSWTAMIVGYTQSGYPDKALKLFTD--KKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW M+ G++ G + D + VTI + + L + +
Sbjct: 358 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 417
Query: 370 HSLGIRLG-LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------- 421
H ++ + + V NA V YAKC ++ A+ +F K V +WN++I G
Sbjct: 418 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 477
Query: 422 ---LDDNVS-------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
LD ++ PD+ T+ S++SAC+ L ++++G +H + + L +++V +
Sbjct: 478 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN-WLERDLFVYLS 536
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
+L+ Y CG+ + + +FDAM +K+ V+W+ +I GY G +L +F M+ +Q
Sbjct: 537 VLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC 596
Query: 532 EVIFTTILSACS 543
+ + ACS
Sbjct: 597 GISMMPVFGACS 608
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 211/427 (49%), Gaps = 44/427 (10%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGP---DSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
+L+A + +DI+ G K+H ++V D + T ++ MYA C SR VFD
Sbjct: 90 LLQASGKRKDIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--------GNQITLGSLVTACAKLR 260
KN+ W ++I+ Y +N+ L++ + E F+E + T ++ ACA +
Sbjct: 149 KNLFQWNAVISSYSRNE-------LYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ G +HG ++K G+ + + AL+ Y G + DA +FD + +LVSW +MI
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 321 GYTQSGYPDKALKLFTDKKWAD----FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++ +G+ +++ L + + F P+ T+ +VL A+ + +G+ VH ++L
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 377 GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLD------------ 423
L+ V+ NAL+DMY+KC I +A+ IF+ + K+V++WN+++ G
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 424 -------DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFY 476
++V D VT+++ + C + LH YS KQ + N V A + Y
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV-YNELVANAFVASY 440
Query: 477 AKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFT 536
AKCG A+ VF +R K +W+A+IGG+ D SL M + P+
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 537 TILSACS 543
++LSACS
Sbjct: 501 SLLSACS 507
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 423 DDNVSPDAVTLVS-----VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
DD S DA LV ++ A +++G +H + L ++ + T ++ YA
Sbjct: 72 DDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYA 131
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLN-EEVQPNEVIFT 536
CG +R VFDA+R KN W+A+I Y L F +M++ ++ P+ +
Sbjct: 132 MCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYP 191
Query: 537 TILSACSHTGMVGEG 551
++ AC+ VG G
Sbjct: 192 CVIKACAGMSDVGIG 206
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 199/649 (30%), Positives = 340/649 (52%), Gaps = 43/649 (6%)
Query: 69 HALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLY 127
H +++ G D + L+ MY + VF +P + S+ +I N+L
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 128 KDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGL 186
++F+K M+K +++ VL++C L ++ G ++H +K D V T
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 187 VDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQ 246
+DMYAKC ++ ++ +FD + + N S+ +MI GY Q + + L+LF+R+ + ++
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDE 382
Query: 247 ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDE 306
I+L + ACA ++ L +G ++G +K + ++ + A +DMY KC + +A VFDE
Sbjct: 383 ISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDE 442
Query: 307 LCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMG 366
+ D VSW A+I + Q+G + L LF + P+ T S+L A G+L G
Sbjct: 443 MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYG 501
Query: 367 RMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYI----------------FETTSE 409
+HS ++ G+ + + +L+DMY+KC +I +A I E
Sbjct: 502 MEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHN 561
Query: 410 KDV----IAWNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQV 448
K + ++WNSIISG ++ ++PD T +V+ CA+L + +
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGL 621
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G +HA K+ L S+VY+ + L++ Y+KCGD +R++F+ ++ VTW+AMI GY
Sbjct: 622 GKQIHAQVIKKEL-QSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 680
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G G ++ LF M+ E ++PN V F +IL AC+H G++ +G + FY M RD+ P +
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 740
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY-SRFDLGEVMIKKML 627
HY MVD+L ++G+++ ALE + MP E D ++ L C ++ + ++ E +L
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 800
Query: 628 ELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
L P + Y L+SN+YA G W +V+ +R M+ L K PGCS V+L
Sbjct: 801 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 849
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 184/654 (28%), Positives = 301/654 (46%), Gaps = 81/654 (12%)
Query: 84 TKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKE 143
K+++ Y + A S F+ MP D S+ M+ Y N +E + M + E
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 144 HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQV 202
D F+ +LK C L D GM++H +V+VG D + L+DMYAK + S +V
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 203 FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
F +KN VSW+++IAG VQN+ L F M++ +Q S++ +CA L L
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSEL 297
Query: 263 HQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGY 322
G LH + LK + + TA LDMY KC N++DA+ +FD +++ S+ AMI GY
Sbjct: 298 RLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGY 357
Query: 323 TQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DY 381
+Q + KAL LF + + ++++ V A A + L+ G ++ L I+ L D
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------------- 425
V NA +DMY KC +A+A +F+ +D ++WN+II+ + N
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 426 -VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ PD T S++ AC G++ G +H+ K G ++SN VG +L++ Y+KCG +
Sbjct: 478 RIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG-MASNSSVGCSLIDMYSKCGMIEE 535
Query: 485 ARMV----------------FDAMREKN----TVTWSAMIGGYGMQGDGGGSLALFSDML 524
A + + M K V+W+++I GY M+ + LF+ M+
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKC---------------------FYSMCRDFK 563
+ P++ + T+L C++ G G + YS C D
Sbjct: 596 EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLH 655
Query: 564 -----FVPSMKH----YVCMVDLLARAGRLEEALEFMENMPIE---PDVSLFGAFLHGCG 611
F S++ + M+ A G+ EEA++ E M +E P+ F + L C
Sbjct: 656 DSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACA 715
Query: 612 LYSRFDLGE---VMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQ 662
D G M+K+ L P Y SN+ G+ +V + EL+++
Sbjct: 716 HMGLIDKGLEYFYMMKRDYGLDPQLPHY----SNMVDILGKSGKVKRALELIRE 765
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/561 (26%), Positives = 256/561 (45%), Gaps = 78/561 (13%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETL 207
FS V K C + ++ G + H ++ G P +FVL L+ +Y RD S+ VFD+
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 208 DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM------------------------------ 237
++VVSW MI GY +++ + FN M
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 238 --REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCG 295
REG +E + T ++ C+ L G +HG ++++G + + +ALLDMY K
Sbjct: 171 MGREG-IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 296 NIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLS 355
++ VF + + VSW+A+I G Q+ ALK F + + + + ASVL
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 356 ASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIA 414
+ A L L +G +H+ ++ D V A +DMYAKC + DA+ +F+ + + +
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 415 WNSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
+N++I+G + + D ++L V ACA + + G ++ +
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
K LS +V V A ++ Y KC A VFD MR ++ V+W+A+I + G G +L
Sbjct: 410 KSS-LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETL 468
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVC-MVD 576
LF ML ++P+E F +IL AC+ G +G G + S+ + + S C ++D
Sbjct: 469 FLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK--SGMASNSSVGCSLID 525
Query: 577 LLARAGRLEEA-------------------LEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
+ ++ G +EEA LE M N ++ + + + G + + +
Sbjct: 526 MYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSE 585
Query: 618 LGEVMIKKMLEL--HPDKACY 636
+++ +M+E+ PDK Y
Sbjct: 586 DAQMLFTRMMEMGITPDKFTY 606
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 105/270 (38%), Gaps = 40/270 (14%)
Query: 396 VIADARYIFETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAY 455
V++ R + E S + V +++ L+ S V CA GA+++G HA+
Sbjct: 14 VVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAH 73
Query: 456 STKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG------- 508
G + +V LL Y D SA MVFD M ++ V+W+ MI GY
Sbjct: 74 MIISGFRPT-TFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFK 132
Query: 509 ------------------------MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSH 544
G+ S+ +F DM E ++ + F IL CS
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 545 TGMVGEGWKCFYSMCR---DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
G + + R D V + ++D+ A+ R E+L + +P + VS
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAA----SALLDMYAKGKRFVESLRVFQGIPEKNSVS 248
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHP 631
+ A + GC + L K+M +++
Sbjct: 249 -WSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 337 bits (863), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 187/551 (33%), Positives = 297/551 (53%), Gaps = 28/551 (5%)
Query: 152 VLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG-LVDMYAKCRDIGSSRQVFDETLDKN 210
+L+ C D+G +VHC ++K G + + + L+DMY KCR+ + +VFD ++N
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 211 VVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHG 270
VVSW+++++G+V N + L LF+ M + N+ T + + AC L AL +G +HG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 271 YILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDK 330
+ LKIG E+ + +L+DMY KCG I +A VF + L+SW AMI G+ +GY K
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 331 ALKLFTDKKWADF--FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE---DYTVIN 385
AL F + A+ P+ T+ S+L A + G + G+ +H +R G T+
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 386 ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDD-----------------NVSP 428
+LVD+Y KC + AR F+ EK +I+W+S+I G N
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 429 DAVTLVSVISACASLGAVQVGSSLHAYSTK--QGLLSSNVYVGTALLNFYAKCGDAQSAR 486
D+ L S+I A ++ G + A + K GL +S V ++++ Y KCG A
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS---VLNSVVDMYLKCGLVDEAE 368
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
F M+ K+ ++W+ +I GYG G G S+ +F +ML ++P+EV + +LSACSH+G
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAF 606
M+ EG + F + P ++HY C+VDLL RAGRL+EA ++ MPI+P+V ++
Sbjct: 429 MIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTL 488
Query: 607 LHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLS 666
L C ++ +LG+ + K +L + YV++SNLY G W REL +GL
Sbjct: 489 LSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLK 548
Query: 667 KSPGCSLVDLD 677
K G S V+++
Sbjct: 549 KEAGMSWVEIE 559
Score = 208 bits (530), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 234/453 (51%), Gaps = 28/453 (6%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY A VFDSMP + S+ ++ + LN K + + M ++ +
Sbjct: 47 LIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPN 106
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVF 203
F FS LKAC L +++G+++H +K+ G + V G LVDMY+KC I + +VF
Sbjct: 107 EFTFSTNLKACGLLNALEKGLQIHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVF 165
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE--GNQITLGSLVTACAKLRA 261
+D++++SW +MIAG+V + L F M+E ++ ++ TL SL+ AC+
Sbjct: 166 RRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGM 225
Query: 262 LHQGKWLHGYILKIGIEINSH--LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMI 319
++ GK +HG++++ G S + +L+D+YVKCG + AR FD++ ++SW+++I
Sbjct: 226 IYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLI 285
Query: 320 VGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL--G 377
+GY Q G +A+ LF + + + ++S++ A L G+ + +L ++L G
Sbjct: 286 LGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSG 345
Query: 378 LEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG---------------- 421
LE +V+N++VDMY KC ++ +A F KDVI+W +I+G
Sbjct: 346 LET-SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYE 404
Query: 422 -LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG 480
L N+ PD V ++V+SAC+ G ++ G L + + + V +++ + G
Sbjct: 405 MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAG 464
Query: 481 DAQSARMVFDAMREK-NTVTWSAMIGGYGMQGD 512
+ A+ + D M K N W ++ + GD
Sbjct: 465 RLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 497
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 205/427 (48%), Gaps = 31/427 (7%)
Query: 241 FVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDA 300
+ + L S++ C + QG +H Y+LK G +N L+DMY KC A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 301 RSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQL 360
VFD + ++VSW+A++ G+ +G +L LF++ +PN T ++ L A L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 361 GNLNMGRMVHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSII 419
L G +H +++G E + N+LVDMY+KC I +A +F ++ +I+WN++I
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 420 SGL-----------------DDNVS--PDAVTLVSVISACASLGAVQVGSSLHAYSTKQG 460
+G + N+ PD TL S++ AC+S G + G +H + + G
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 461 L-LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
S+ + +L++ Y KCG SAR FD ++EK ++WS++I GY +G+ ++ L
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F + Q + ++I+ + ++ +G K ++ +VD+
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLEL-----HPDKA 634
+ G ++EA + M ++ DV + + G Y + LG+ ++ E+ PD+
Sbjct: 360 KCGLVDEAEKCFAEMQLK-DVISWTVVITG---YGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 635 CYYVLVS 641
CY ++S
Sbjct: 416 CYLAVLS 422
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 336 bits (862), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 304/569 (53%), Gaps = 21/569 (3%)
Query: 133 FYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYA 191
++ M++ E +NF F V KAC L D+ VH ++K D FV T VDM+
Sbjct: 39 LFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFV 98
Query: 192 KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS 251
KC + + +VF+ +++ +W +M++G+ Q+ + LF MR + + +T+ +
Sbjct: 99 KCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMT 158
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSID 311
L+ + + ++L + +H +++G+++ + + Y KCG++ A+ VF+ + D
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 312 --LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+VSW +M Y+ G A L+ +F P+ T ++ ++ L GR++
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 278
Query: 370 HSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG------L 422
HS I LG +D IN + MY+K AR +F+ + + ++W +ISG +
Sbjct: 279 HSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 423 DDNVS-----------PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
D+ ++ PD VTL+S+IS C G+++ G + A + G NV + A
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNA 398
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
L++ Y+KCG AR +FD EK VTW+ MI GY + G +L LFS M++ + +PN
Sbjct: 399 LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPN 458
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
+ F +L AC+H+G + +GW+ F+ M + + P + HY CMVDLL R G+LEEALE +
Sbjct: 459 HITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELI 518
Query: 592 ENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWI 651
NM +PD ++GA L+ C ++ + E + + L P A YV ++N+YA+ G W
Sbjct: 519 RNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWD 578
Query: 652 RVNQVRELMKQRGLSKSPGCSLVDLDIAN 680
++R +MKQR + K PG S++ ++ N
Sbjct: 579 GFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 216/445 (48%), Gaps = 32/445 (7%)
Query: 210 NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLH 269
+V +W I V + E L+LF M+ G E N T + ACA+L + + +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 270 GYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPD 329
+++K + + TA +DM+VKC ++ A VF+ + D +W AM+ G+ QSG+ D
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 330 KALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALV 388
KA LF + + + P+ VT+ +++ +++ +L + +H++GIRLG++ TV N +
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 389 DMYAKCHVIADARYIFETTSEKD--VIAWNSIISG-----------------LDDNVSPD 429
Y KC + A+ +FE D V++WNS+ L + PD
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
T +++ ++C + + G +H+++ G ++ ++ Y+K D SAR++F
Sbjct: 256 LSTFINLAASCQNPETLTQGRLIHSHAIHLG-TDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D M + V+W+ MI GY +GD +LALF M+ +P+ V +++S C G +
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 550 EG-W----KCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFG 604
G W Y RD + + ++D+ ++ G + EA + +N P E V +
Sbjct: 375 TGKWIDARADIYGCKRDNVMICN-----ALIDMYSKCGSIHEARDIFDNTP-EKTVVTWT 428
Query: 605 AFLHGCGLYSRFDLGEVMIKKMLEL 629
+ G L F + KM++L
Sbjct: 429 TMIAGYALNGIFLEALKLFSKMIDL 453
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 239/545 (43%), Gaps = 63/545 (11%)
Query: 63 GSLKAFHALLIVDGLTNDK-CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWY 121
G + HA LI +D T V M+ V YA VF+ MP D ++ M+ +
Sbjct: 69 GCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGF 128
Query: 122 FLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDS 180
+ ++ MR D+ ++++ + + +H +++G
Sbjct: 129 CQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQV 188
Query: 181 FVLTGLVDMYAKCRDIGSSRQVFD--ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM- 237
V + Y KC D+ S++ VF+ + D+ VVSW SM Y A + L+ M
Sbjct: 189 TVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLML 248
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
RE F + + T +L +C L QG+ +H + + +G + + + + MY K +
Sbjct: 249 REEF-KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
AR +FD + S VSWT MI GY + G D+AL LF + P+ VT+ S++S
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 358 AQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
+ G+L G+ + + G ++ + NAL+DMY+KC I +AR IF+ T EK V+ W
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 416 NSIISG-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 458
++I+G +D + P+ +T ++V+ ACA G+++ G + + K
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMK 486
Query: 459 QGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLA 518
Q VY + L+ Y S M+ G +G +L
Sbjct: 487 Q------VYNISPGLDHY------------------------SCMVDLLGRKGKLEEALE 516
Query: 519 LFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKH-YVCMVDL 577
L +M +P+ I+ +L+AC V + S+ F P M YV M ++
Sbjct: 517 LIRNM---SAKPDAGIWGALLNACKIHRNVKIAEQAAESL---FNLEPQMAAPYVEMANI 570
Query: 578 LARAG 582
A AG
Sbjct: 571 YAAAG 575
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 130/276 (47%), Gaps = 10/276 (3%)
Query: 53 LNLLGLCKSTGSL---KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPN 108
+NL C++ +L + H+ I G D + +SMY AR +FD M +
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 109 PDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEG--M 166
S+ VMI Y + + + M K ++ D ++ C + ++ G +
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
Query: 167 KVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+I + + L+DMY+KC I +R +FD T +K VV+WT+MIAGY N
Sbjct: 380 DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGI 439
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL--V 284
E L LF++M + + N IT +++ ACA +L +G W + +I+K I+ L
Sbjct: 440 FLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKG-WEYFHIMKQVYNISPGLDHY 498
Query: 285 TALLDMYVKCGNIRDARSVFDELCS-IDLVSWTAMI 319
+ ++D+ + G + +A + + + D W A++
Sbjct: 499 SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALL 534
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Query: 36 ELDQTFASFHSL------PS-IPCLNLLGLCKSTGSL---KAFHALLIVDGLTNDK---C 82
++D+ A FH++ P + L+L+ C GSL K A + G D C
Sbjct: 337 DMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMIC 396
Query: 83 NTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
N L+ MY G + AR +FD+ P ++ MI Y LN ++ + ++ + M
Sbjct: 397 NA-LIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDY 455
Query: 143 EHDNFVFSKVLKACCELRDIDEG 165
+ ++ F VL+AC +++G
Sbjct: 456 KPNHITFLAVLQACAHSGSLEKG 478
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 335 bits (859), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 201/632 (31%), Positives = 334/632 (52%), Gaps = 25/632 (3%)
Query: 64 SLKAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
S KA H ++ G D T L++ Y G K A ++FD MP + SF + + Y
Sbjct: 67 SAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA 126
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSF 181
+D + Y + + E + VF+ LK L + +H IVK+G ++F
Sbjct: 127 C----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAF 182
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V L++ Y+ C + S+R VF+ L K++V W +++ YV+N ++ L L + MR
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
N T + + A L A K +HG ILK ++ + LL +Y + G++ DA
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
VF+E+ D+V W+ MI + Q+G+ ++A+ LF + A PN T++S+L+ A
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 362 NLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
+G +H L +++G + D V NAL+D+YAKC + A +F S K+ ++WN++I
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 421 G-----------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
G L + VS VT S + ACASL ++ +G +H + K +
Sbjct: 423 GYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN-A 481
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDM 523
V V +L++ YAKCGD + A+ VF+ M + +W+A+I GY G G +L + M
Sbjct: 482 KKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM 541
Query: 524 LNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGR 583
+ + +PN + F +LS CS+ G++ +G +CF SM RD P ++HY CMV LL R+G+
Sbjct: 542 KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQ 601
Query: 584 LEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNL 643
L++A++ +E +P EP V ++ A L + + +++L+++P YVLVSN+
Sbjct: 602 LDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNM 661
Query: 644 YASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
YA +W V +R+ MK+ G+ K PG S ++
Sbjct: 662 YAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 155/370 (41%), Gaps = 24/370 (6%)
Query: 250 GSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCS 309
G+++ C + K +H ILK G ++ LL+ YVK G +DA ++FDE+
Sbjct: 53 GAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPE 112
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+ VS+ + GY + L++ N S L L + +
Sbjct: 113 RNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWL 168
Query: 370 HSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--- 425
HS ++LG + + AL++ Y+ C + AR +FE KD++ W I+S +N
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 426 --------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTA 471
P+ T + + A LGA +H K + + VG
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYV-LDPRVGVG 287
Query: 472 LLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPN 531
LL Y + GD A VF+ M + + V WS MI + G ++ LF M V PN
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 532 EVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFM 591
E ++IL+ C+ G G + + + F + ++D+ A+ +++ A++
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQ-LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLF 406
Query: 592 ENMPIEPDVS 601
+ + +VS
Sbjct: 407 AELSSKNEVS 416
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 333 bits (855), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 211/657 (32%), Positives = 339/657 (51%), Gaps = 28/657 (4%)
Query: 47 LPSIPCLNLLGLC----KSTGSLKAFHALLIVDGLTNDKCNTK-LVSMYGSFGHVKYARS 101
+ S L+LL C KS +K H ++ GL D K L+++Y + AR
Sbjct: 1 MESSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARH 60
Query: 102 VFDSMP-NPDFYSFQVMIRWYFLNDLYKDIVE-FYKCMRKRLKEHDNFVFSKVLKACCEL 159
VF++ D Y + ++ Y N ++ D +E F + + + D+F F V+KA L
Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGAL 120
Query: 160 RDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
G +H +VK G D V + LV MYAK +S QVFDE +++V SW ++I
Sbjct: 121 GREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVI 180
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
+ + Q+ A++ L LF RM E N ++L ++AC++L L +GK +H +K G E
Sbjct: 181 SCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFE 240
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDK 338
++ ++ +AL+DMY KC + AR VF ++ LV+W +MI GY G +++
Sbjct: 241 LDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 339 KWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVI 397
P+ T+ S+L A ++ NL G+ +H IR + +N +L+D+Y KC
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 398 ADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISAC 440
A +F T + +WN +IS + V PD VT SV+ AC
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 441 ASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTW 500
+ L A++ G +H S + L ++ + +ALL+ Y+KCG+ + A +F+++ +K+ V+W
Sbjct: 421 SQLAALEKGKQIH-LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSW 479
Query: 501 SAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCR 560
+ MI YG G +L F +M ++P+ V +LSAC H G++ EG K F M
Sbjct: 480 TVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRS 539
Query: 561 DFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPD-VSLFGAFLHGCGLYSRFDLG 619
+ P ++HY CM+D+L RAGRL EA E ++ P D L C L+ LG
Sbjct: 540 KYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLG 599
Query: 620 EVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+ + + ++E +PD A Y+++ NLYAS W +VR MK+ GL K PGCS +++
Sbjct: 600 DRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEM 656
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 330 bits (845), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/556 (33%), Positives = 300/556 (53%), Gaps = 61/556 (10%)
Query: 179 DSFVLTGLVDMYA--KCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D F + L+ A + R + S ++ + N+ SW I G+ +++ +E +L+ +
Sbjct: 84 DPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQ 143
Query: 237 M-REGFVEG--NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVK 293
M R G E + T L CA LR G + G++LK+ +E+ SH+ A + M+
Sbjct: 144 MLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFAS 203
Query: 294 CGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASV 353
CG++ +AR VFDE DLVSW +I GY + G +KA+ ++ + P+ VT+ +
Sbjct: 204 CGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGL 263
Query: 354 LSASAQLGNLNMGR----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSE 409
+S+ + LG+LN G+ V G+R+ + ++NAL+DM++KC I +AR IF+ +
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTI---PLVNALMDMFSKCGDIHEARRIFDNLEK 320
Query: 410 KDVIAWNSIISG-------------LDD-------------------------------- 424
+ +++W ++ISG DD
Sbjct: 321 RTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 425 ---NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
N PD +T++ +SAC+ LGA+ VG +H Y K L S NV +GT+L++ YAKCG+
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSL-SLNVALGTSLVDMYAKCGN 439
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
A VF ++ +N++T++A+IGG + GD +++ F++M++ + P+E+ F +LSA
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C H GM+ G F M F P +KHY MVDLL RAG LEEA ME+MP+E D +
Sbjct: 500 CCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAA 559
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMK 661
++GA L GC ++ +LGE KK+LEL P + YVL+ +Y W + R +M
Sbjct: 560 VWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMN 619
Query: 662 QRGLSKSPGCSLVDLD 677
+RG+ K PGCS ++++
Sbjct: 620 ERGVEKIPGCSSIEVN 635
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 151/564 (26%), Positives = 268/564 (47%), Gaps = 87/564 (15%)
Query: 23 FFSYTNQQT---PTQHELDQTFASFHSLP-SIPCLNLLGLCKSTGSLKAFHALLIVDGLT 78
+S++ ++T P + + S HS P L+LL CK LK A +I++GL
Sbjct: 23 LYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLI 82
Query: 79 NDK-CNTKLVSM--YGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK 135
D +++L++ ++ Y+ + + NP+ +S+ V IR + ++ K+ YK
Sbjct: 83 LDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYK 142
Query: 136 CMRKR---LKEHDNFVFSKVLKACCELRDIDEG-------MKVHCEIVKVGGPDSFVLTG 185
M + D+F + + K C +LR G +K+ E+V S V
Sbjct: 143 QMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELV------SHVHNA 196
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
+ M+A C D+ ++R+VFDE+ +++VSW +I GY + A++ + ++ M V+ +
Sbjct: 197 SIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPD 256
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
+T+ LV++C+ L L++GK + Y+ + G+ + LV AL+DM+ KCG+I +AR +FD
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF--------------------- 344
L +VSWT MI GY + G D + KLF D + D
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 345 ----------PNHVTIASVLSASAQLGNLNMGRMVH--------SLGIRLGLEDYTVINA 386
P+ +T+ LSA +QLG L++G +H SL + LG +
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALG-------TS 429
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPD 429
LVDMYAKC I++A +F ++ + + +II GL D ++PD
Sbjct: 430 LVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPD 489
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+T + ++SAC G +Q G + + L+ + + +++ + G + A +
Sbjct: 490 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Query: 490 DAMR-EKNTVTWSAMIGGYGMQGD 512
++M E + W A++ G M G+
Sbjct: 550 ESMPMEADAAVWGALLFGCRMHGN 573
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 329 bits (843), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 206/655 (31%), Positives = 336/655 (51%), Gaps = 27/655 (4%)
Query: 47 LPSIPCLNLLGLCKSTGSLKA---FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSV 102
L S P L L C +++ H+LL+ G + LVSMY + AR +
Sbjct: 182 LSSFPAL--LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRL 239
Query: 103 FDSMPNP-DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRD 161
FD D + ++ Y + + +E ++ M +++ L AC
Sbjct: 240 FDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSY 299
Query: 162 IDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIA 219
G ++H ++K S +V L+ MY +C + + ++ + + +VV+W S+I
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 220 GYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEI 279
GYVQN +E L F+ M + +++++ S++ A +L L G LH Y++K G +
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDS 419
Query: 280 NSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKK 339
N + L+DMY KC F + DL+SWT +I GY Q+ +AL+LF D
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 340 WADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIAD 399
+ + + S+L AS+ L ++ + + +H +R GL D + N LVD+Y KC +
Sbjct: 480 KKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 539
Query: 400 ARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISACAS 442
A +FE+ KDV++W S+IS ++ +S D+V L+ ++SA AS
Sbjct: 540 ATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAAS 599
Query: 443 LGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSA 502
L A+ G +H Y ++G + A+++ YA CGD QSA+ VFD + K + +++
Sbjct: 600 LSALNKGREIHCYLLRKGFCLEGS-IAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTS 658
Query: 503 MIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
MI YGM G G ++ LF M +E V P+ + F +L ACSH G++ EG M ++
Sbjct: 659 MINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEY 718
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
+ P +HYVC+VD+L RA + EA EF++ M EP ++ A L C +S ++GE+
Sbjct: 719 ELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIA 778
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
+++LEL P VLVSN++A GRW V +VR MK G+ K PGCS +++D
Sbjct: 779 AQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 833
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 160/553 (28%), Positives = 278/553 (50%), Gaps = 30/553 (5%)
Query: 85 KLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEH 144
KLV MYG G + A VFD MP+ +++ MI Y N + Y MR
Sbjct: 121 KLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVF 203
F +LKAC +LRDI G ++H +VK+G F++ LV MYAK D+ ++R++F
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 204 DETLDK-NVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRAL 262
D +K + V W S+++ Y + + E L LF M N T+ S +TAC
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 263 HQGKWLHGYILKIGIEINS-HLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVG 321
GK +H +LK + ++ AL+ MY +CG + A + ++ + D+V+W ++I G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 322 YTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-D 380
Y Q+ +AL+ F+D A + V++ S+++AS +L NL G +H+ I+ G + +
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 381 YTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN--------------- 425
V N L+DMY+KC++ F +KD+I+W ++I+G N
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 480
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+ D + L S++ A + L ++ + +H + ++GLL + + L++ Y KC +
Sbjct: 481 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLL--DTVIQNELVDVYGKCRNMG 538
Query: 484 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
A VF++++ K+ V+W++MI + G+ ++ LF M+ + + V ILSA +
Sbjct: 539 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 544 HTGMVGEGWKCF-YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA---LEFMENMPIEPD 599
+ +G + Y + + F S+ V +VD+ A G L+ A + +E +
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIERKGLLQY 656
Query: 600 VSLFGAF-LHGCG 611
S+ A+ +HGCG
Sbjct: 657 TSMINAYGMHGCG 669
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 132/422 (31%), Positives = 203/422 (48%), Gaps = 31/422 (7%)
Query: 148 VFSKVLKACCELRDIDEGMKVHCEIVKVGGPD---SFVLTGLVDMYAKCRDIGSSRQVFD 204
F+ VL+ C + R + +G ++H I K P F+ LV MY KC + + +VFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTF-PSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGS---LVTACAKLRA 261
E D+ +W +MI YV N L L+ MR VEG + L S L+ ACAKLR
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR---VEGVPLGLSSFPALLKACAKLRD 197
Query: 262 LHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSI-DLVSWTAMIV 320
+ G LH ++K+G +V AL+ MY K ++ AR +FD D V W +++
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE- 379
Y+ SG + L+LF + PN TI S L+A +G+ +H+ ++
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS 317
Query: 380 -DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNV------------ 426
+ V NAL+ MY +C + A I + DV+ WNS+I G N+
Sbjct: 318 SELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDM 377
Query: 427 -----SPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
D V++ S+I+A L + G LHAY K G SN+ VG L++ Y+KC
Sbjct: 378 IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG-WDSNLQVGNTLIDMYSKCNL 436
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
F M +K+ ++W+ +I GY +L LF D+ + ++ +E+I +IL A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 542 CS 543
S
Sbjct: 497 SS 498
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 328 bits (841), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 193/618 (31%), Positives = 331/618 (53%), Gaps = 26/618 (4%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
ND T+ + + ++ A +FD M D + + VMI+ + LY + V+FY M
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIG 197
+ D F + V+K+ + ++EG K+H ++K+G D +V L+ +Y K
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 198 SSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257
+ +VF+E ++++VSW SMI+GY+ L+LF M + + ++ + S + AC+
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 258 KLRALHQGKWLHGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ + GK +H + ++ IE +V T++LDMY K G + A +F+ + ++V+W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWN 302
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWAD-FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIR 375
MI Y ++G A F + P+ +T ++L ASA L GR +H +R
Sbjct: 303 VMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMR 358
Query: 376 LGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------------ 422
G + V+ AL+DMY +C + A IF+ +EK+VI+WNSII+
Sbjct: 359 RGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALEL 418
Query: 423 -----DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYA 477
D ++ PD+ T+ S++ A A ++ G +HAY K S N + +L++ YA
Sbjct: 419 FQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS-NTIILNSLVHMYA 477
Query: 478 KCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTT 537
CGD + AR F+ + K+ V+W+++I Y + G G S+ LFS+M+ V PN+ F +
Sbjct: 478 MCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 538 ILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIE 597
+L+ACS +GMV EGW+ F SM R++ P ++HY CM+DL+ R G A F+E MP
Sbjct: 538 LLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 598 PDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVR 657
P ++G+ L+ + + E +++ ++ D YVL+ N+YA GRW VN+++
Sbjct: 598 PTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIK 657
Query: 658 ELMKQRGLSKSPGCSLVD 675
LM+ +G+S++ S V+
Sbjct: 658 LLMESKGISRTSSRSTVE 675
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 180/369 (48%), Gaps = 31/369 (8%)
Query: 274 KIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALK 333
K+ ++N +T L + + DA +FDE+ D W MI G+T G +A++
Sbjct: 57 KVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQ 116
Query: 334 LFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLG-LEDYTVINALVDMYA 392
++ +A + T V+ + A + +L G+ +H++ I+LG + D V N+L+ +Y
Sbjct: 117 FYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYM 176
Query: 393 KCHVIADARYIFETTSEKDVIAWNSIISG---LDDNVS--------------PDAVTLVS 435
K DA +FE E+D+++WNS+ISG L D S PD + +S
Sbjct: 177 KLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMS 236
Query: 436 VISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREK 495
+ AC+ + + ++G +H ++ + + + +V V T++L+ Y+K G+ A +F+ M ++
Sbjct: 237 ALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR 296
Query: 496 NTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE-VQPNEVIFTTILSACSHTGMVGEGWKC 554
N V W+ MIG Y G + F M + +QP+ + +L A + + EG
Sbjct: 297 NIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTI 352
Query: 555 F-YSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDV----SLFGAFLHG 609
Y+M R F+P M ++D+ G+L+ A + M E +V S+ A++
Sbjct: 353 HGYAMRRG--FLPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAAYVQN 409
Query: 610 CGLYSRFDL 618
YS +L
Sbjct: 410 GKNYSALEL 418
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/624 (29%), Positives = 323/624 (51%), Gaps = 27/624 (4%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYK--C 136
N ++S + G V AR +FD+MP+ ++ +++ WY N + + + ++ C
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 137 MRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKC 193
D+ F+ +L C + + +VH VK+G P V L+ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 194 RDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLV 253
R + + +F+E +K+ V++ ++I GY ++ E + LF +MR+ + + T ++
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVL 257
Query: 254 TACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLV 313
A L G+ LH + G ++ + +LD Y K + + R +FDE+ +D V
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 314 SWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLG 373
S+ +I Y+Q+ + +L F + + F + A++LS +A L +L MGR +H
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 374 IRLGLEDYT--VINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL--------- 422
+ L D V N+LVDMYAKC + +A IF++ ++ ++W ++ISG
Sbjct: 378 L-LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 423 --------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLN 474
N+ D T +V+ A AS ++ +G LHA+ + G L NV+ G+ L++
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVD 495
Query: 475 FYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVI 534
YAKCG + A VF+ M ++N V+W+A+I + GDG ++ F+ M+ +QP+ V
Sbjct: 496 MYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVS 555
Query: 535 FTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENM 594
+L+ACSH G V +G + F +M + P KHY CM+DLL R GR EA + M+ M
Sbjct: 556 ILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEM 615
Query: 595 PIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRV 653
P EPD ++ + L+ C ++ L E +K+ + + A YV +SN+YA+ G W +V
Sbjct: 616 PFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKV 675
Query: 654 NQVRELMKQRGLSKSPGCSLVDLD 677
V++ M++RG+ K P S V+++
Sbjct: 676 RDVKKAMRERGIKKVPAYSWVEVN 699
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/524 (24%), Positives = 234/524 (44%), Gaps = 79/524 (15%)
Query: 146 NFVFSKVLKACCELRDIDEGM-----KVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSS 199
N V S+ L +LR +V I+K G D+ +V+ + + ++
Sbjct: 8 NEVRSRTLATLRQLRQPSPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAA 67
Query: 200 RQVFDETLDKNVVSWTSMIAG-------------------------------YVQNDCAQ 228
R+V+DE KN VS +MI+G Y +N
Sbjct: 68 RKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFD 127
Query: 229 EGLVLFNRM--REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E LF +M + +T +L+ C + +H + +K+G + N L +
Sbjct: 128 EAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS 187
Query: 287 --LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
LL Y + + A +F+E+ D V++ +I GY + G +++ LF + +
Sbjct: 188 NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQ 247
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYI 403
P+ T + VL A L + +G+ +H+L + G D +V N ++D Y+K + + R +
Sbjct: 248 PSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRML 307
Query: 404 FETTSEKDVIAWNSIIS---------------------GLDDNVSPDAVTLVSVISACAS 442
F+ E D +++N +IS G D P +++S A+
Sbjct: 308 FDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFP----FATMLSIAAN 363
Query: 443 LGAVQVGSSLHAYSTKQGLLS---SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
L ++Q+G LH Q LL+ S ++VG +L++ YAKC + A ++F ++ ++ TV+
Sbjct: 364 LSSLQMGRQLHC----QALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS 419
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG--MVGEGWKCFYS 557
W+A+I GY +G G L LF+ M ++ ++ F T+L A + ++G+ F
Sbjct: 420 WTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFII 479
Query: 558 MCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
+ + V S +VD+ A+ G +++A++ E MP VS
Sbjct: 480 RSGNLENVFSGS---GLVDMYAKCGSIKDAVQVFEEMPDRNAVS 520
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 6/158 (3%)
Query: 66 KAFHALLIVDG-LTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K HA +I G L N + LV MY G +K A VF+ MP+ + S+ +I + N
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 125 -DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSF 181
D I F K + L+ D+ VL AC +++G + + + G P
Sbjct: 532 GDGEAAIGAFAKMIESGLQP-DSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKK 590
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDE-TLDKNVVSWTSMI 218
++D+ + + ++ DE + + + W+S++
Sbjct: 591 HYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 327 bits (838), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 205/646 (31%), Positives = 337/646 (52%), Gaps = 31/646 (4%)
Query: 54 NLLGLCKSTGSL---KAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPD 110
++L C S L K A +I G + T +V +Y GH+ A VF +PNP
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 111 FYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHC 170
S+ VM+ Y ++ +E +K MR E +N + V+ AC + E +VH
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHA 375
Query: 171 EIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD---KNVVSWTSMIAGYVQNDC 226
+ K G DS V L+ MY+K DI S QVF++ D +N+V+ MI + Q+
Sbjct: 376 WVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQSKK 433
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
+ + LF RM + + ++ ++ SL++ L L+ GK +HGY LK G+ ++ + ++
Sbjct: 434 PGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSS 490
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L +Y KCG++ ++ +F + D W +MI G+ + GY +A+ LF++ P+
Sbjct: 491 LFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPD 550
Query: 347 HVTIASVLSASAQLGNLNMGRMVHSLGIRLGLED-YTVINALVDMYAKCHVIADARYIFE 405
T+A+VL+ + +L G+ +H +R G++ + +ALV+MY+KC + AR +++
Sbjct: 551 ESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 406 TTSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQV 448
E D ++ +S+ISG + + D+ + S++ A A +
Sbjct: 611 RLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSL 670
Query: 449 GSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYG 508
G+ +HAY TK GL + VG++LL Y+K G F + + + W+A+I Y
Sbjct: 671 GAQVHAYITKIGLCTEPS-VGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYA 729
Query: 509 MQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSM 568
G +L +++ M + +P++V F +LSACSH G+V E + SM +D+ P
Sbjct: 730 QHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPEN 789
Query: 569 KHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE 628
+HYVCMVD L R+GRL EA F+ NM I+PD ++G L C ++ +LG+V KK +E
Sbjct: 790 RHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIE 849
Query: 629 LHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
L P A Y+ +SN+ A G W V + R+LMK G+ K PG S V
Sbjct: 850 LEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 239 bits (610), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 175/621 (28%), Positives = 291/621 (46%), Gaps = 67/621 (10%)
Query: 99 ARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCE 158
A VF + + Y + +I N Y + + + M ++ D++ +S VL AC
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 159 LRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMI 218
L + G V ++K G D FV T +VD+YAKC + + +VF + +VVSWT M+
Sbjct: 264 LEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVML 323
Query: 219 AGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIE 278
+GY +++ A L +F MR VE N T+ S+++AC + + + +H ++ K G
Sbjct: 324 SGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFY 383
Query: 279 INSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSW-TAMIVGYTQSGYPDKALKLFTD 337
++S + AL+ MY K G+I + VF++L I + MI ++QS P KA++LFT
Sbjct: 384 LDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTR 443
Query: 338 KKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHV 396
+ ++ S+LS L LN+G+ VH ++ GL D TV ++L +Y+KC
Sbjct: 444 MLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 397 IADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTLVSVISA 439
+ ++ +F+ KD W S+ISG LDD SPD TL +V++
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTV 560
Query: 440 CASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT 499
C+S ++ G +H Y+ + G + + +G+AL+N Y+KCG + AR V+D + E + V+
Sbjct: 561 CSSHPSLPRGKEIHGYTLRAG-IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVS 619
Query: 500 WSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSAC----------------S 543
S++I GY G LF DM+ + ++IL A +
Sbjct: 620 CSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYIT 679
Query: 544 HTGM-----VGEGWKCFYSM-------CRDFKFV--PSMKHYVCMVDLLARAGRLEEALE 589
G+ VG YS C+ F + P + + ++ A+ G+ EAL+
Sbjct: 680 KIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQ 739
Query: 590 ---FMENMPIEPDVSLFGAFLHGC---GLY--SRFDLGEVMIKKMLELHPDKACYYVLVS 641
M+ +PD F L C GL S F L ++ K + P+ Y +V
Sbjct: 740 VYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV--KDYGIEPENRHYVCMVD 797
Query: 642 NLYASDGRWIRVNQVRELMKQ 662
L GR R+ + +
Sbjct: 798 AL----GRSGRLREAESFINN 814
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/529 (27%), Positives = 262/529 (49%), Gaps = 24/529 (4%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+S Y + G + A +FD++P PD S +MI Y + L+++ + F+ M E +
Sbjct: 90 LLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEAN 149
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ V+ AC L+ V C +K+G V + L+D+++K + +VF
Sbjct: 150 EISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR 209
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
++L NV W ++IAG ++N LF+ M GF + + T S++ ACA L L
Sbjct: 210 DSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRF 269
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK + ++K G E + + TA++D+Y KCG++ +A VF + + +VSWT M+ GYT+
Sbjct: 270 GKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTK 328
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTV 383
S AL++F + + + N+ T+ SV+SA + + VH+ + G D +V
Sbjct: 329 SNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSV 388
Query: 384 INALVDMYAKCHVIADARYIFETTSE---KDVIAWNSIISGLDDNVSP-DAVTL------ 433
AL+ MY+K I + +FE + ++++ N +I+ + P A+ L
Sbjct: 389 AAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQ 446
Query: 434 -------VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSAR 486
SV S + L + +G +H Y+ K GL+ ++ VG++L Y+KCG + +
Sbjct: 447 EGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLV-LDLTVGSSLFTLYSKCGSLEESY 505
Query: 487 MVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTG 546
+F + K+ W++MI G+ G ++ LFS+ML++ P+E +L+ CS
Sbjct: 506 KLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHP 565
Query: 547 MVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMP 595
+ G K + M +V++ ++ G L+ A + + +P
Sbjct: 566 SLPRG-KEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP 613
Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 226/481 (46%), Gaps = 36/481 (7%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR 238
D F+ L+ Y+ + + ++FD +VVS MI+GY Q+ +E L F++M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 239 EGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIR 298
E N+I+ GS+++AC+ L+A + + + +K+G + +AL+D++ K
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 299 DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASA 358
DA VF + S ++ W +I G ++ LF + P+ T +SVL+A A
Sbjct: 203 DAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
Query: 359 QLGNLNMGRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSI 418
L L G++V + I+ G ED V A+VD+YAKC +A+A +F V++W +
Sbjct: 263 SLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 419 ISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGL 461
+SG + V + T+ SVISAC V S +HA+ K G
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 462 -LSSNVYVGTALLNFYAKCGDAQSARMVF---DAMREKNTVTWSAMIGGYGMQGDGGGSL 517
L S+ V AL++ Y+K GD + VF D ++ +N V + MI + G ++
Sbjct: 383 YLDSS--VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAI 438
Query: 518 ALFSDMLNEEVQPNEVIFTTILSA--CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMV 575
LF+ ML E ++ +E ++LS C + G G+ + D S +
Sbjct: 439 RLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS------LF 492
Query: 576 DLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLE--LHPDK 633
L ++ G LEE+ + + +P + D + + + + G Y + +ML+ PD+
Sbjct: 493 TLYSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDE 551
Query: 634 A 634
+
Sbjct: 552 S 552
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 452 LHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQG 511
L A+ ++ LL +V++ +LL++Y+ G A +FD + + + V+ + MI GY
Sbjct: 70 LQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHR 129
Query: 512 DGGGSLALFSDMLNEEVQPNEVIFTTILSACS 543
SL FS M + NE+ + +++SACS
Sbjct: 130 LFEESLRFFSKMHFLGFEANEISYGSVISACS 161
>sp|O64705|PP184_ARATH Pentatricopeptide repeat-containing protein At2g34400
OS=Arabidopsis thaliana GN=PCMP-E23 PE=3 SV=2
Length = 621
Score = 326 bits (836), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 194/557 (34%), Positives = 306/557 (54%), Gaps = 42/557 (7%)
Query: 146 NFVFSKVLKACC---ELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQV 202
+F+F +LK C +LR I M +H V P+ F++ V++ D S +
Sbjct: 39 DFLF--LLKKCISVNQLRQIQAQMLLHS----VEKPN-FLIPKAVEL----GDFNYSSFL 87
Query: 203 FDETLDKNVVSWTSMIAGYVQ--NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLR 260
F T + N S+ MI G ND + L L+ RM+ ++ ++ T + ACAKL
Sbjct: 88 FSVTEEPNHYSFNYMIRGLTNTWND-HEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLE 146
Query: 261 ALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIV 320
+ G+ +H + K+G+E + H+ +L+ MY KCG + AR +FDE+ D VSW +MI
Sbjct: 147 EIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMIS 206
Query: 321 GYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGI--RLGL 378
GY+++GY A+ LF + F P+ T+ S+L A + LG+L GR++ + I ++GL
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266
Query: 379 EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN------------- 425
+ + + L+ MY KC + AR +F +KD +AW ++I+ N
Sbjct: 267 STF-LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM 325
Query: 426 ----VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGD 481
VSPDA TL +V+SAC S+GA+++G + ++++ L N+YV T L++ Y KCG
Sbjct: 326 EKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL-QHNIYVATGLVDMYGKCGR 384
Query: 482 AQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSA 541
+ A VF+AM KN TW+AMI Y QG +L LF M V P+++ F +LSA
Sbjct: 385 VEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSA 441
Query: 542 CSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVS 601
C H G+V +G + F+ M F VP ++HY ++DLL+RAG L+EA EFME P +PD
Sbjct: 442 CVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEI 501
Query: 602 LFGAFLHGCGLYSRFDLGEVMIKKMLELHPDK-ACYYVLVSNLYASDGRWIRVNQVRELM 660
+ A L C + E ++ ++E+ K A YV+ SN+ A W ++R LM
Sbjct: 502 MLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALM 561
Query: 661 KQRGLSKSPGCSLVDLD 677
+ RG+ K+PGCS ++++
Sbjct: 562 RDRGVVKTPGCSWIEIE 578
Score = 216 bits (549), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 221/430 (51%), Gaps = 25/430 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFY 112
L LL C S L+ A +++ + +K N L+ G Y+ +F P+ Y
Sbjct: 41 LFLLKKCISVNQLRQIQAQMLLHSV--EKPNF-LIPKAVELGDFNYSSFLFSVTEEPNHY 97
Query: 113 SFQVMIRWYFLNDLYKD---IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
SF MIR L + + D + Y+ M+ + D F ++ V AC +L +I G VH
Sbjct: 98 SFNYMIRG--LTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 170 CEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ KVG D + L+ MYAKC +G +R++FDE +++ VSW SMI+GY + A+
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
+ + LF +M E E ++ TL S++ AC+ L L G+ L + I +++ L + L+
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHV 348
MY KCG++ AR VF+++ D V+WTAMI Y+Q+G +A KLF + + P+
Sbjct: 276 SMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAG 335
Query: 349 TIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETT 407
T+++VLSA +G L +G+ + + L L+ + V LVDMY KC + +A +FE
Sbjct: 336 TLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 395
Query: 408 SEKDVIAWNSIISGLDD--------------NVSPDAVTLVSVISACASLGAVQVGSS-L 452
K+ WN++I+ +V P +T + V+SAC G V G
Sbjct: 396 PVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRYF 455
Query: 453 HAYSTKQGLL 462
H S+ GL+
Sbjct: 456 HEMSSMFGLV 465
>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein At1g06140,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2
SV=1
Length = 558
Score = 326 bits (836), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 302/543 (55%), Gaps = 25/543 (4%)
Query: 158 ELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRDIGSSRQVFDET--LDKNVVSW 214
+ + ++ +VH +++ G D VL + L + Y + + + F+ +N SW
Sbjct: 16 QAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSW 75
Query: 215 TSMIAGYVQND--CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYI 272
++++GY ++ C + L+L+NRMR + L + AC L L G +HG
Sbjct: 76 NTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLA 135
Query: 273 LKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKAL 332
+K G++ + ++ +L++MY + G + A+ VFDE+ + V W ++ GY + +
Sbjct: 136 MKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVF 195
Query: 333 KLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT--VINALVDM 390
+LF + + +T+ ++ A + +G+ VH + IR D + + +++DM
Sbjct: 196 RLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDM 255
Query: 391 YAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDDNVSPDAVTL 433
Y KC ++ +AR +FET+ +++V+ W ++ISG L +++ P+ TL
Sbjct: 256 YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTL 315
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
+++ +C+SLG+++ G S+H Y + G+ V T+ ++ YA+CG+ Q AR VFD M
Sbjct: 316 AAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF-TSFIDMYARCGNIQMARTVFDMMP 374
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
E+N ++WS+MI +G+ G +L F M ++ V PN V F ++LSACSH+G V EGWK
Sbjct: 375 ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWK 434
Query: 554 CFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLY 613
F SM RD+ VP +HY CMVDLL RAG + EA F++NMP++P S +GA L C ++
Sbjct: 435 QFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494
Query: 614 SRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSL 673
DL + +K+L + P+K+ YVL+SN+YA G W VN VR M +G K G S
Sbjct: 495 KEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSA 554
Query: 674 VDL 676
++
Sbjct: 555 TEV 557
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/479 (28%), Positives = 238/479 (49%), Gaps = 28/479 (5%)
Query: 53 LNLLGLCKSTGSLKAFHALLIVDGLTNDKC-NTKLVSMYGSFGHVKYARSVFDSMP--NP 109
L +L K+ + HA +I+ G ++ + L + Y + +A S F+ +P
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 110 DFYSFQVMIRWYFLNDL--YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
+ +S+ ++ Y + Y D++ Y MR+ D+F +KAC L ++ G+
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 168 VHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
+H +K G D +V LV+MYA+ + S+++VFDE +N V W ++ GY++
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGY-ILKIGIEINSHLVT 285
E LF MR+ + + +TL LV AC + A GK +HG I + I+ + +L
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345
+++DMYVKC + +AR +F+ ++V WT +I G+ + +A LF P
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIF 404
N T+A++L + + LG+L G+ VH IR G+E D + +DMYA+C I AR +F
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 405 ETTSEKDVIAWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQ 447
+ E++VI+W+S+I+ NV P++VT VS++SAC+ G V+
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 448 VG-SSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVT-WSAMI 504
G + + G++ + +++ + G+ A+ D M K + W A++
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYA-CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALL 488
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 192/363 (52%), Gaps = 12/363 (3%)
Query: 68 FHALLIVDGL-TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDL 126
H L + +GL +D LV MY G ++ A+ VFD +P + + V+++ Y
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSK 190
Query: 127 YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLT 184
++ + MR D ++KAC + G VH ++ D ++
Sbjct: 191 DPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA 250
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEG 244
++DMY KCR + ++R++F+ ++D+NVV WT++I+G+ + + A E LF +M +
Sbjct: 251 SIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILP 310
Query: 245 NQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVF 304
NQ TL +++ +C+ L +L GK +HGY+++ GIE+++ T+ +DMY +CGNI+ AR+VF
Sbjct: 311 NQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVF 370
Query: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D + +++SW++MI + +G ++AL F K + PN VT S+LSA + GN+
Sbjct: 371 DMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVK 430
Query: 365 MG-----RMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVI-AWNSI 418
G M G+ E Y +VD+ + I +A+ + K + AW ++
Sbjct: 431 EGWKQFESMTRDYGVVPEEEHYA---CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGAL 487
Query: 419 ISG 421
+S
Sbjct: 488 LSA 490
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 187/390 (47%), Gaps = 26/390 (6%)
Query: 251 SLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL-C- 308
+L+T ++ + L+ + +H ++ G E L ++L + Y++ + A S F+ + C
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 309 SIDLVSWTAMIVGYTQSG---YPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
+ SW ++ GY++S Y D L ++ D + + + A LG L
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGV-DSFNLVFAIKACVGLGLLEN 127
Query: 366 GRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-- 422
G ++H L ++ GL+ D V +LV+MYA+ + A+ +F+ ++ + W ++ G
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLK 187
Query: 423 ---------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY 467
D ++ DA+TL+ ++ AC ++ A +VG +H S ++ + + Y
Sbjct: 188 YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDY 247
Query: 468 VGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEE 527
+ ++++ Y KC +AR +F+ ++N V W+ +I G+ + LF ML E
Sbjct: 248 LQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 528 VQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEA 587
+ PN+ IL +CS G + G M R+ + ++ ++ +D+ AR G ++ A
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAV-NFTSFIDMYARCGNIQMA 366
Query: 588 LEFMENMPIEPDVSLFGAFLHGCGLYSRFD 617
+ MP E +V + + ++ G+ F+
Sbjct: 367 RTVFDMMP-ERNVISWSSMINAFGINGLFE 395
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 85/169 (50%), Gaps = 7/169 (4%)
Query: 59 CKSTGSL---KAFHALLIVDGLTNDKCN-TKLVSMYGSFGHVKYARSVFDSMPNPDFYSF 114
C S GSL K+ H +I +G+ D N T + MY G+++ AR+VFD MP + S+
Sbjct: 322 CSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISW 381
Query: 115 QVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVK 174
MI + +N L+++ ++ + M+ + ++ F +L AC ++ EG K + +
Sbjct: 382 SSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTR 441
Query: 175 VGG--PDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVS-WTSMIAG 220
G P+ +VD+ + +IG ++ D K + S W ++++
Sbjct: 442 DYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSA 490
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 326 bits (835), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 183/566 (32%), Positives = 303/566 (53%), Gaps = 21/566 (3%)
Query: 129 DIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEI-VKVGGPDSFVLTGLV 187
+ EF + M K ++ + + +AC ELR + G +H + + + P + ++
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVL 125
Query: 188 DMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQI 247
MY +CR + + ++FDE + N VS T+MI+ Y + + + LF+ M +
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
+L+ + RAL G+ +H ++++ G+ N+ + T +++MYVKCG + A+ VFD++
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGR 367
V+ T ++VGYTQ+G ALKLF D + + VL A A L LN+G+
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGK 305
Query: 368 MVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
+H+ +LGLE + +V LVD Y KC A F+ E + ++W++IISG
Sbjct: 306 QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS 365
Query: 422 -LDDNVSP------------DAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYV 468
++ V ++ T S+ AC+ L +G +HA + K+ L+ S Y
Sbjct: 366 QFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ-YG 424
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
+AL+ Y+KCG A VF++M + V W+A I G+ G+ +L LF M++ +
Sbjct: 425 ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGM 484
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
+PN V F +L+ACSH G+V +G C +M R + P++ HY CM+D+ AR+G L+EAL
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
+FM+NMP EPD + FL GC + +LGE+ +++ +L P+ YVL NLY G
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAG 604
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLV 674
+W ++ +LM +R L K CS +
Sbjct: 605 KWEEAAEMMKLMNERMLKKELSCSWI 630
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 213/443 (48%), Gaps = 23/443 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
++ MY ++ A +FD M + S MI Y + V + M +
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKCRDIGSSRQVFD 204
+ +++ +LK+ R +D G ++H +++ G ++ + TG+V+MY KC + +++VFD
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 205 ETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQ 264
+ K V+ T ++ GY Q A++ L LF + VE + ++ ACA L L+
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 265 GKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQ 324
GK +H + K+G+E + T L+D Y+KC + A F E+ + VSW+A+I GY Q
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 325 SGYPDKALKLFTDKKWADF-FPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDY 381
++A+K F + + N T S+ A + L + N+G VH+ I+ L Y
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG-----------------LDD 424
+AL+ MY+KC + DA +FE+ D++AW + ISG +
Sbjct: 424 GE-SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC 482
Query: 425 NVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQS 484
+ P++VT ++V++AC+ G V+ G ++ ++ + +++ YA+ G
Sbjct: 483 GMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDE 542
Query: 485 ARMVFDAMR-EKNTVTWSAMIGG 506
A M E + ++W + G
Sbjct: 543 ALKFMKNMPFEPDAMSWKCFLSG 565
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 325 bits (833), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 186/532 (34%), Positives = 282/532 (53%), Gaps = 23/532 (4%)
Query: 165 GMKVHCEIVKV--GGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 222
G VH IVK P F+ L++MY+K S+R V T +NVVSWTS+I+G
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 223 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSH 282
QN LV F MR V N T A A LR GK +H +K G ++
Sbjct: 85 QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 144
Query: 283 LVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWAD 342
+ + DMY K DAR +FDE+ +L +W A I G P +A++ F + + D
Sbjct: 145 VGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRID 204
Query: 343 FFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADAR 401
PN +T + L+A + +LN+G +H L +R G + D +V N L+D Y KC I +
Sbjct: 205 GHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSE 264
Query: 402 YIFETTSEKDVIAWNSIISGLDDNVSPDAVTLV-----------------SVISACASLG 444
IF K+ ++W S+++ N + +++ SV+SACA +
Sbjct: 265 IIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMA 324
Query: 445 AVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMI 504
+++G S+HA++ K + ++VG+AL++ Y KCG + + FD M EKN VT +++I
Sbjct: 325 GLELGRSIHAHAVK-ACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLI 383
Query: 505 GGYGMQGDGGGSLALFSDMLNEEV--QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDF 562
GGY QG +LALF +M PN + F ++LSACS G V G K F SM +
Sbjct: 384 GGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTY 443
Query: 563 KFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVM 622
P +HY C+VD+L RAG +E A EF++ MPI+P +S++GA + C ++ + LG +
Sbjct: 444 GIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLA 503
Query: 623 IKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLV 674
+ + +L P + +VL+SN +A+ GRW N VRE +K G+ K G S +
Sbjct: 504 AENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 208/449 (46%), Gaps = 24/449 (5%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKD-IVEFYKCMRKRLKEH 144
L++MY H + AR V P + S+ +I N + +VEF++ MR+
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFE-MRREGVVP 106
Query: 145 DNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGP-DSFVLTGLVDMYAKCRDIGSSRQVF 203
++F F KA LR G ++H VK G D FV DMY K R +R++F
Sbjct: 107 NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLF 166
Query: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALH 263
DE ++N+ +W + I+ V + +E + F R N IT + + AC+ L+
Sbjct: 167 DEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLN 226
Query: 264 QGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYT 323
G LHG +L+ G + + + L+D Y KC IR + +F E+ + + VSW +++ Y
Sbjct: 227 LGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYV 286
Query: 324 QSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTV 383
Q+ +KA L+ + + I+SVLSA A + L +GR +H+ ++ +E
Sbjct: 287 QNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIF 346
Query: 384 I-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
+ +ALVDMY KC I D+ F+ EK+++ NS+I G
Sbjct: 347 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 426 --VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 483
+P+ +T VS++SAC+ GAV+ G + + + +++ + G +
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE 466
Query: 484 SARMVFDAMREKNTVT-WSAMIGGYGMQG 511
A M + T++ W A+ M G
Sbjct: 467 RAYEFIKKMPIQPTISVWGALQNACRMHG 495
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 139/322 (43%), Gaps = 15/322 (4%)
Query: 68 FHALLIVDGLTNDK--CNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLND 125
H L++ G D CN L+ YG ++ + +F M + S+ ++ Y N
Sbjct: 231 LHGLVLRSGFDTDVSVCNG-LIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 289
Query: 126 LYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-FVLT 184
+ Y RK + E +F+ S VL AC + ++ G +H VK + FV +
Sbjct: 290 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 349
Query: 185 GLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM--REGFV 242
LVDMY KC I S Q FDE +KN+V+ S+I GY L LF M R
Sbjct: 350 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 409
Query: 243 EGNQITLGSLVTACAKLRALHQG-KWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
N +T SL++AC++ A+ G K GIE + + ++DM + G + A
Sbjct: 410 TPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAY 469
Query: 302 SVFDELCSIDLVS-WTAMIVGYTQSGYPDKALKLFTDKKWADFFP----NHVTIASVLSA 356
++ +S W A+ G P L L + P NHV +++ +A
Sbjct: 470 EFIKKMPIQPTISVWGALQNACRMHGKPQ--LGLLAAENLFKLDPKDSGNHVLLSNTFAA 527
Query: 357 SAQLGNLNMGR-MVHSLGIRLG 377
+ + N R + +GI+ G
Sbjct: 528 AGRWAEANTVREELKGVGIKKG 549
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/569 (32%), Positives = 314/569 (55%), Gaps = 64/569 (11%)
Query: 168 VHCEIVKVGGPDS-FVLTGLVD---MYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQ 223
+H +++K+G ++ + L+ L++ + + + VF + N++ W +M G+
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 224 NDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHL 283
+ L L+ M + N T ++ +CAK +A +G+ +HG++LK+G +++ ++
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 284 VTALLDMYVKCGNIRDARSVFD-------------------------------ELCSIDL 312
T+L+ MYV+ G + DA VFD E+ D+
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 313 VSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSL 372
VSW AMI GY ++G +AL+LF D + P+ T+ +V+SA AQ G++ +GR VH
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH-- 289
Query: 373 GIRLGLEDY------TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISG----- 421
L ++D+ ++NAL+D+Y+KC + A +FE KDVI+WN++I G
Sbjct: 290 ---LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMN 346
Query: 422 ------------LDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVY-V 468
L +P+ VT++S++ ACA LGA+ +G +H Y K+ +N +
Sbjct: 347 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL 406
Query: 469 GTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEV 528
T+L++ YAKCGD ++A VF+++ K+ +W+AMI G+ M G S LFS M +
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 529 QPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEAL 588
QP+++ F +LSACSH+GM+ G F +M +D+K P ++HY CM+DLL +G +EA
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 526
Query: 589 EFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDG 648
E + M +EPD ++ + L C ++ +LGE + ++++ P+ YVL+SN+YAS G
Sbjct: 527 EMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586
Query: 649 RWIRVNQVRELMKQRGLSKSPGCSLVDLD 677
RW V + R L+ +G+ K PGCS +++D
Sbjct: 587 RWNEVAKTRALLNDKGMKKVPGCSSIEID 615
Score = 200 bits (508), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 171/614 (27%), Positives = 280/614 (45%), Gaps = 111/614 (18%)
Query: 44 FHSLPSI-----------PCLNLLGLCKSTGSLKAFHALLIVDGLTN-DKCNTKLVS--- 88
FH LPS P L+LL CK+ SL+ HA +I GL N + +KL+
Sbjct: 17 FHFLPSSSDPPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCI 76
Query: 89 MYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFV 148
+ F + YA SVF ++ P+ + M R + L+ ++ Y CM +++
Sbjct: 77 LSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVG-GPDSFVLTGLVDMYAKC-------------- 193
F VLK+C + + EG ++H ++K+G D +V T L+ MY +
Sbjct: 137 FPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSP 196
Query: 194 -RDIGS----------------SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNR 236
RD+ S ++++FDE K+VVSW +MI+GY + +E L LF
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
M + V ++ T+ ++V+ACA+ ++ G+ +H +I G N +V AL+D+Y KCG
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
+ A +F+ L D++SW +I GYT +AL LF + + PN VT+ S+L A
Sbjct: 317 LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPA 376
Query: 357 SAQLGNLNMGRMVHS-LGIRL-GLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVI 413
A LG +++GR +H + RL G+ + + + +L+DMYAKC I A +F + K +
Sbjct: 377 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS 436
Query: 414 AWNSIISGL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYS 456
+WN++I G + PD +T V ++SAC+ G + +G
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG------- 489
Query: 457 TKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGS 516
R +F M + +T + YG D G
Sbjct: 490 -----------------------------RHIFRTMTQDYKMT--PKLEHYGCMIDLLGH 518
Query: 517 LALFS----DMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
LF + E++P+ VI+ ++L AC G V G ++ + P YV
Sbjct: 519 SGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG--SYV 576
Query: 573 CMVDLLARAGRLEE 586
+ ++ A AGR E
Sbjct: 577 LLSNIYASAGRWNE 590
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 77/415 (18%)
Query: 325 SGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYT-V 383
S YP L +D + D NH ++ S+L L +L R++H+ I++GL +
Sbjct: 13 SSYPFHFLPSSSDPPY-DSIRNHPSL-SLLHNCKTLQSL---RIIHAQMIKIGLHNTNYA 67
Query: 384 INALVD---MYAKCHVIADARYIFETTSEKDVIAWNSIISGL---DDNVS---------- 427
++ L++ + + A +F+T E +++ WN++ G D VS
Sbjct: 68 LSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMIS 127
Query: 428 ----PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCG--- 480
P++ T V+ +CA A + G +H + K G ++YV T+L++ Y + G
Sbjct: 128 LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGC-DLDLYVHTSLISMYVQNGRLE 186
Query: 481 DA----------------------------QSARMVFDAMREKNTVTWSAMIGGYGMQGD 512
DA ++A+ +FD + K+ V+W+AMI GY G+
Sbjct: 187 DAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN 246
Query: 513 GGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYV 572
+L LF DM+ V+P+E T++SAC+ +G + G + + D F ++K
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG-RQVHLWIDDHGFGSNLKIVN 305
Query: 573 CMVDLLARAGRLEEALEFMENMPIEPDVS---LFGAFLHGCGLYSRFDLGEVMIKK---- 625
++DL ++ G LE A E +P + +S L G + H L + M++
Sbjct: 306 ALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 365
Query: 626 ----MLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
ML + P AC ++ ++ GRWI V + + +K + S SL+D+
Sbjct: 366 NDVTMLSILP--ACAHLGAIDI----GRWIHV-YIDKRLKGVTNASSLRTSLIDM 413
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 202/637 (31%), Positives = 331/637 (51%), Gaps = 28/637 (4%)
Query: 66 KAFHALLIVDGLTN--DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+A H +I G + N LV+ Y G + A S+F+++ D S+ +I Y
Sbjct: 34 RAVHGQIIRTGASTCIQHANV-LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 124 NDLYKD---IVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG-PD 179
N +++ ++ MR + + + + + KA L+ G + H +VK+ D
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 180 SFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
+V T LV MY K + +VF ++N +W++M++GY +E + +FN
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 240 GFVEGNQ--ITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
EG+ +++++ A + G+ +H +K G+ L AL+ MY KC ++
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
+A +FD + ++W+AM+ GY+Q+G +A+KLF+ A P+ TI VL+A
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 358 AQLGNLNMGRMVHSLGIRLGLEDYT-VINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ + L G+ +HS ++LG E + ALVDMYAK +ADAR F+ E+DV W
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
S+ISG N + P+ T+ SV+ AC+SL +++G +H ++ K
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLAL 519
G V +G+AL Y+KCG + +VF K+ V+W+AMI G G G +L L
Sbjct: 453 GF-GLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALEL 511
Query: 520 FSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLA 579
F +ML E ++P++V F I+SACSH G V GW F M P + HY CMVDLL+
Sbjct: 512 FEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLS 571
Query: 580 RAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVL 639
RAG+L+EA EF+E+ I+ + L+ L C + + +LG +K++ L ++ YV
Sbjct: 572 RAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQ 631
Query: 640 VSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
+S +Y + GR V +V + M+ G+SK GCS ++L
Sbjct: 632 LSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIEL 668
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 235/451 (52%), Gaps = 29/451 (6%)
Query: 28 NQQTPTQHELDQTFASFHSLPSIP-CLNLLGLCKSTGSLKA------FHALLI-VDGLTN 79
N + + + Q F + +P L G+ K+ SL++ HAL++ + +
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 80 DKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRK 139
+T LV MY G V+ VF MP + Y++ M+ Y ++ ++ + +
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 140 RLKE--HDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLT-GLVDMYAKCRDI 196
+E ++VF+ VL + + G ++HC +K G L+ LV MY+KC +
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 197 GSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTAC 256
+ ++FD + D+N ++W++M+ GY QN + E + LF+RM ++ ++ T+ ++ AC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 257 AKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELCSIDLVSWT 316
+ + L +GK LH ++LK+G E + TAL+DMY K G + DAR FD L D+ WT
Sbjct: 333 SDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT 392
Query: 317 AMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRL 376
++I GY Q+ ++AL L+ K A PN T+ASVL A + L L +G+ VH I+
Sbjct: 393 SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKH 452
Query: 377 GLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN---------- 425
G + + +AL MY+KC + D +F T KDV++WN++ISGL N
Sbjct: 453 GFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELF 512
Query: 426 -------VSPDAVTLVSVISACASLGAVQVG 449
+ PD VT V++ISAC+ G V+ G
Sbjct: 513 EEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 192/385 (49%), Gaps = 26/385 (6%)
Query: 248 TLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDEL 307
TL +T ++ R L G+ +HG I++ G L++ Y KCG + A S+F+ +
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 308 CSIDLVSWTAMIVGYTQSGYPDKA---LKLFTDKKWADFFPNHVTIASVLSASAQLGNLN 364
D+VSW ++I GY+Q+G + ++LF + + D PN T+A + A + L +
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135
Query: 365 MGRMVHSLGIRL-GLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL- 422
+GR H+L +++ D V +LV MY K ++ D +F E++ W++++SG
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 423 ------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSS 464
+ S +V+S+ A+ V +G +H + K GLL
Sbjct: 196 TRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGF 255
Query: 465 NVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDML 524
V + AL+ Y+KC A +FD+ ++N++TWSAM+ GY G+ ++ LFS M
Sbjct: 256 -VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 525 NEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRL 584
+ ++P+E +L+ACS + EG K +S F + +VD+ A+AG L
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEG-KQLHSFLLKLGFERHLFATTALVDMYAKAGCL 373
Query: 585 EEALEFMENMPIEPDVSLFGAFLHG 609
+A + + + E DV+L+ + + G
Sbjct: 374 ADARKGFDCLQ-ERDVALWTSLISG 397
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 184/548 (33%), Positives = 305/548 (55%), Gaps = 22/548 (4%)
Query: 149 FSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDETLD 208
FS++L+ C + R I + ++K G P + LVD KC DI +RQVFD +
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 209 KNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWL 268
+++V+W S+IA +++ ++E + ++ M V ++ TL S+ A + L + +
Sbjct: 128 RHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRS 187
Query: 269 HGYILKIGIEINSHLV-TALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGY 327
HG + +G+E+++ V +AL+DMYVK G R+A+ V D + D+V TA+IVGY+Q G
Sbjct: 188 HGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGE 247
Query: 328 PDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGLEDYTVIN-A 386
+A+K F PN T ASVL + L ++ G+++H L ++ G E +
Sbjct: 248 DTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS 307
Query: 387 LVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL-----------------DDNVSPD 429
L+ MY +C ++ D+ +F+ + ++W S+ISGL D++ P+
Sbjct: 308 LLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPN 367
Query: 430 AVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVF 489
+ TL S + C++L + G +H TK G + Y G+ L++ Y KCG + AR+VF
Sbjct: 368 SFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF-DRDKYAGSGLIDLYGKCGCSDMARLVF 426
Query: 490 DAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVG 549
D + E + ++ + MI Y G G +L LF M+N +QPN+V ++L AC+++ +V
Sbjct: 427 DTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVE 486
Query: 550 EGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHG 609
EG + F S +D K + + HY CMVDLL RAGRLEEA E + I PD+ L+ L
Sbjct: 487 EGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSA 544
Query: 610 CGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSP 669
C ++ + ++ E + +K+LE+ P +L+SNLYAS G+W RV +++ MK L K+P
Sbjct: 545 CKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNP 604
Query: 670 GCSLVDLD 677
S V+++
Sbjct: 605 AMSWVEIN 612
Score = 182 bits (461), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 214/467 (45%), Gaps = 21/467 (4%)
Query: 60 KSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIR 119
+S +K A ++ G + +KLV G + YAR VFD M ++ +I
Sbjct: 79 RSISGIKTIQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIA 138
Query: 120 WYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPD 179
+ + K+ VE Y+ M D + S V KA +L E + H V +G
Sbjct: 139 YLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV 198
Query: 180 S--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRM 237
S FV + LVDMY K ++ V D +K+VV T++I GY Q E + F M
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
Query: 238 REGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNI 297
V+ N+ T S++ +C L+ + GK +HG ++K G E T+LL MY++C +
Sbjct: 259 LVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLV 318
Query: 298 RDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSAS 357
D+ VF + + VSWT++I G Q+G + AL F PN T++S L
Sbjct: 319 DDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
Query: 358 AQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWN 416
+ L GR +H + + G + D + L+D+Y KC AR +F+T SE DVI+ N
Sbjct: 379 SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLN 438
Query: 417 SIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQ 459
++I N + P+ VT++SV+ AC + V+ G L K
Sbjct: 439 TMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD 498
Query: 460 GLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGG 506
++ +N + +++ + G + A M+ + + V W ++
Sbjct: 499 KIMLTNDHYA-CMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSA 544
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 195/432 (45%), Gaps = 36/432 (8%)
Query: 3 LISLLQRHVSRTKKPKLQLRFFSYTNQQTPTQHELDQTFASFHSLPSIPCLNLLGLCKST 62
LI+ L +H R K +++ TN P ++ L F +F L L K
Sbjct: 136 LIAYLIKH--RRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLS---------LEKEA 184
Query: 63 GSLKAFHALLIVDGL--TNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRW 120
+ H L ++ GL +N + LV MY FG + A+ V D + D +I
Sbjct: 185 ---QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 121 YFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS 180
Y + V+ ++ M + + + ++ VL +C L+DI G +H +VK G +
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 181 FV-LTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
T L+ MY +C + S +VF N VSWTS+I+G VQN + L+ F +M
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 240 GFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRD 299
++ N TL S + C+ L +G+ +HG + K G + + + + L+D+Y KCG
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQ 359
AR VFD L +D++S MI Y Q+G+ +AL LF PN VT+ SVL A
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLAC-- 479
Query: 360 LGNLNMGRMVHS----------LGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSE 409
N R+V I L + Y +VD+ + + +A +
Sbjct: 480 ----NNSRLVEEGCELFDSFRKDKIMLTNDHYA---CMVDLLGRAGRLEEAEMLTTEVIN 532
Query: 410 KDVIAWNSIISG 421
D++ W +++S
Sbjct: 533 PDLVLWRTLLSA 544
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 320 bits (820), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 196/593 (33%), Positives = 313/593 (52%), Gaps = 28/593 (4%)
Query: 108 NPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMK 167
NPD F + L LY + + KR + H+ L+ C + +D G +
Sbjct: 24 NPDL--FAAIKPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQ 81
Query: 168 VHCEIVKVGGPDSFVLTG--LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQND 225
+H +V+ G D G LV+MYAKC + + VF + +++V + ++I+G+V N
Sbjct: 82 IHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVVNG 140
Query: 226 CAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVT 285
+ + + MR + ++ T SL+ + L K +HG K+G + + ++ +
Sbjct: 141 SPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHGLAFKLGFDSDCYVGS 199
Query: 286 ALLDMYVKCGNIRDARSVFDELCSID-LVSWTAMIVGYTQSGYPDKALKLFTDKKWADFF 344
L+ Y K ++ DA+ VFDEL D V W A++ GY+Q + AL +F+ +
Sbjct: 200 GLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVG 259
Query: 345 PNHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYI 403
+ TI SVLSA G+++ GR +H L ++ G D V NAL+DMY K + +A I
Sbjct: 260 VSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSI 319
Query: 404 FETTSEKDVIAWNSIISGLD-----------------DNVSPDAVTLVSVISACASLGAV 446
FE E+D+ WNS++ D + PD VTL +V+ C L ++
Sbjct: 320 FEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASL 379
Query: 447 QVGSSLHAYSTKQGLL---SSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAM 503
+ G +H Y GLL SSN ++ +L++ Y KCGD + ARMVFD+MR K++ +W+ M
Sbjct: 380 RQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIM 439
Query: 504 IGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFK 563
I GYG+Q G +L +FS M V+P+E+ F +L ACSH+G + EG M +
Sbjct: 440 INGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYN 499
Query: 564 FVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGLYSRFDLGEVMI 623
+P+ HY C++D+L RA +LEEA E + PI + ++ + L C L+ DL V
Sbjct: 500 ILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAG 559
Query: 624 KKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVDL 676
K++ EL P+ YVL+SN+Y G++ V VR+ M+Q+ + K+PGCS + L
Sbjct: 560 KRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVL 612
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 202/458 (44%), Gaps = 62/458 (13%)
Query: 65 LKAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFL 123
+K H L G +D + LV+ Y F V+ A+ VFD +P+ D + W L
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD-----DSVLWNAL 233
Query: 124 NDLYKDIVEF------YKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG- 176
+ Y I F + MR+ + VL A DID G +H VK G
Sbjct: 234 VNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS 293
Query: 177 GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEG--LVLF 234
G D V L+DMY K + + + +F+ ++++ +W S++ V + C L LF
Sbjct: 294 GSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLC--VHDYCGDHDGTLALF 351
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGI----EINSHLVTALLDM 290
RM + + +TL +++ C +L +L QG+ +HGY++ G+ N + +L+DM
Sbjct: 352 ERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDM 411
Query: 291 YVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTI 350
YVKCG++RDAR VFD + D SW MI GY + AL +F+ A P+ +T
Sbjct: 412 YVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITF 471
Query: 351 ASVLSASAQLGNLNMGR-----MVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFE 405
+L A + G LN GR M I + Y + +DM + + +A +E
Sbjct: 472 VGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACV---IDMLGRADKLEEA---YE 525
Query: 406 TTSEKDV----IAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQG- 460
K + + W SI+S + + D A+ G LH +
Sbjct: 526 LAISKPICDNPVVWRSILSSCRLHGNKDL--------------ALVAGKRLHELEPEHCG 571
Query: 461 --LLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKN 496
+L SNVYV + G + V DAMR++N
Sbjct: 572 GYVLMSNVYV---------EAGKYEEVLDVRDAMRQQN 600
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 94/220 (42%), Gaps = 18/220 (8%)
Query: 38 DQTFASFHSL------PSIPCLN-LLGLCKSTGSLK---AFHALLIVDGLTNDKCNTK-- 85
D T A F + P I L +L C SL+ H +IV GL N K + +
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI 404
Query: 86 ---LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLK 142
L+ MY G ++ AR VFDSM D S+ +MI Y + + ++ + CM +
Sbjct: 405 HNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGV 464
Query: 143 EHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGG--PDSFVLTGLVDMYAKCRDIGSSR 200
+ D F +L+AC ++EG ++ V P S ++DM + + +
Sbjct: 465 KPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAY 524
Query: 201 QV-FDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMRE 239
++ + + N V W S+++ + LV R+ E
Sbjct: 525 ELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHE 564
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/520 (34%), Positives = 286/520 (55%), Gaps = 27/520 (5%)
Query: 179 DSFVLTGLVDMYAKCRDIGSSRQVFDETLDK--NVVSWTSMIAGYVQNDCAQEGLVLFNR 236
D ++ +V K D S V ++ + S+ ++++ Y D + + +
Sbjct: 37 DDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKT 96
Query: 237 MREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGN 296
+ T + AC K + +GK +HG + K+G + ++ +L+ Y CG
Sbjct: 97 FVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGE 156
Query: 297 IRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSA 356
R+A VF E+ D+VSWT +I G+T++G +AL F+ D PN T VL +
Sbjct: 157 SRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSK---MDVEPNLATYVCVLVS 213
Query: 357 SAQLGNLNMGRMVHSLGI-RLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAW 415
S ++G L++G+ +H L + R L NAL+DMY KC ++DA +F +KD ++W
Sbjct: 214 SGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSW 273
Query: 416 NSIISGL------------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYST 457
NS+ISGL + PD L SV+SACASLGAV G +H Y
Sbjct: 274 NSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL 333
Query: 458 KQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 517
G+ + ++GTA+++ YAKCG ++A +F+ +R KN TW+A++GG + G G SL
Sbjct: 334 TAGI-KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESL 392
Query: 518 ALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSM-CRDFKFVPSMKHYVCMVD 576
F +M+ +PN V F L+AC HTG+V EG + F+ M R++ P ++HY CM+D
Sbjct: 393 RYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMID 452
Query: 577 LLARAGRLEEALEFMENMPIEPDVSLFGAFLHGC-GLYSRFDLGEVMIKKMLELHPDKAC 635
LL RAG L+EALE ++ MP++PDV + GA L C + +L + ++ L++ + +
Sbjct: 453 LLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSG 512
Query: 636 YYVLVSNLYASDGRWIRVNQVRELMKQRGLSKSPGCSLVD 675
YVL+SN++A++ RW V ++R LMK +G+SK PG S ++
Sbjct: 513 VYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 199/420 (47%), Gaps = 26/420 (6%)
Query: 53 LNLLGLCKSTGSLKAFHALLIV-DGLTNDKCNTKLVSMYG-SFGHVKYARSVFDSMPNP- 109
L L+ C S K LI D L +D K+V+ G S Y+ + S+ +
Sbjct: 10 LELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVL 69
Query: 110 DFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVH 169
+S+ ++ Y + D + + YK D F F V KAC + I EG ++H
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 170 CEIVKVGGPDS-FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQ 228
+ K+G D +V LV Y C + ++ +VF E ++VVSWT +I G+ + +
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 229 EGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALL 288
E L F++M VE N T ++ + ++ L GK +HG ILK I+ AL+
Sbjct: 190 EALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 289 DMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFT-DKKWADFFPNH 347
DMYVKC + DA VF EL D VSW +MI G +A+ LF+ + + P+
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDG 306
Query: 348 VTIASVLSASAQLGNLNMGRMVHSLGIRLGLE-DYTVINALVDMYAKCHVIADARYIFET 406
+ SVLSA A LG ++ GR VH + G++ D + A+VDMYAKC I A IF
Sbjct: 307 HILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNG 366
Query: 407 TSEKDVIAWNSIISGLDDN-----------------VSPDAVTLVSVISACASLGAVQVG 449
K+V WN+++ GL + P+ VT ++ ++AC G V G
Sbjct: 367 IRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEG 426
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 157/305 (51%), Gaps = 6/305 (1%)
Query: 66 KAFHALLIVDGLTND-KCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLN 124
K H ++ G +D LV YG G + A VF MP D S+ +I +
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 125 DLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL- 183
LYK+ ++ + M E + + VL + + + G +H I+K S
Sbjct: 186 GLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETG 242
Query: 184 TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMR-EGFV 242
L+DMY KC + + +VF E K+ VSW SMI+G V + ++E + LF+ M+ +
Sbjct: 243 NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 243 EGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARS 302
+ + L S+++ACA L A+ G+W+H YIL GI+ ++H+ TA++DMY KCG I A
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 303 VFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGN 362
+F+ + S ++ +W A++ G G+ ++L+ F + F PN VT + L+A G
Sbjct: 363 IFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGL 422
Query: 363 LNMGR 367
++ GR
Sbjct: 423 VDEGR 427
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 319 bits (817), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 278/492 (56%), Gaps = 16/492 (3%)
Query: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245
L+ YA +D+ S+R+VFDE ++NV+ MI YV N EG+ +F M V +
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFD 305
T ++ AC+ + G+ +HG K+G+ + L+ MY KCG + +AR V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 306 ELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNM 365
E+ D+VSW +++VGY Q+ D AL++ + + + T+AS+L A + N+
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 366 GRMVHSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDN 425
V + ++G + N ++ +Y K + +A ++ D
Sbjct: 260 -MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA--------------DG 304
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
PDAV++ SV+ AC A+ +G +H Y ++ L+ N+ + AL++ YAKCG + A
Sbjct: 305 FEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP-NLLLENALIDMYAKCGCLEKA 363
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R VF+ M+ ++ V+W+AMI YG G G ++ALFS + + + P+ + F T L+ACSH
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G++ EG CF M +K P ++H CMVDLL RAG+++EA F+++M +EP+ ++GA
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L C ++S D+G + K+ +L P+++ YYVL+SN+YA GRW V +R +MK +GL
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 666 SKSPGCSLVDLD 677
K+PG S V+++
Sbjct: 544 KKNPGASNVEVN 555
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 210/470 (44%), Gaps = 54/470 (11%)
Query: 64 SLKAFHALLIVDGLT-NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYF 122
+L+ H+ +I++ L N KL+ Y S V AR VFD +P + VMIR Y
Sbjct: 57 TLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYV 116
Query: 123 LNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS-F 181
N Y + V+ + M D++ F VLKAC I G K+H KVG + F
Sbjct: 117 NNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLF 176
Query: 182 VLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGF 241
V GLV MY KC + +R V DE ++VVSW S++ GY QN + L + M
Sbjct: 177 VGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVK 236
Query: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDAR 301
+ + T+ SL+ A + + V + DM+ K G
Sbjct: 237 ISHDAGTMASLLPAVSN--------------------TTTENVMYVKDMFFKMGK----- 271
Query: 302 SVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLG 361
LVSW MI Y ++ P +A++L++ + F P+ V+I SVL A
Sbjct: 272 --------KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTS 323
Query: 362 NLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIIS 420
L++G+ +H R L + + NAL+DMYAKC + AR +FE +DV++W ++IS
Sbjct: 324 ALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMIS 383
Query: 421 GL-----------------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
D + PD++ V+ ++AC+ G ++ G S T ++
Sbjct: 384 AYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKIT 443
Query: 464 SNVYVGTALLNFYAKCGDAQSA-RMVFDAMREKNTVTWSAMIGGYGMQGD 512
+ +++ + G + A R + D E N W A++G + D
Sbjct: 444 PRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 170/368 (46%), Gaps = 23/368 (6%)
Query: 249 LGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTALLDMYVKCGNIRDARSVFDELC 308
LG ++ +R L + +H I+ + NS L L+ Y ++ AR VFDE+
Sbjct: 45 LGQVLDTYPDIRTL---RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP 101
Query: 309 SIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRM 368
+++ MI Y +G+ + +K+F + P+H T VL A + G + +GR
Sbjct: 102 ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK 161
Query: 369 VHSLGIRLGLEDYTVI-NALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGLDDNVS 427
+H ++GL + N LV MY KC +++AR + + S +DV++WNS++ G N
Sbjct: 162 IHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQR 221
Query: 428 PDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARM 487
D + C + +V++ H T LL + T + +
Sbjct: 222 FD-----DALEVCREMESVKIS---HDAGTMASLLPAVSNTTTE---------NVMYVKD 264
Query: 488 VFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGM 547
+F M +K+ V+W+ MIG Y ++ L+S M + +P+ V T++L AC T
Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSA 324
Query: 548 VGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFL 607
+ G K + R K +P++ ++D+ A+ G LE+A + ENM DV + A +
Sbjct: 325 LSLGKKIHGYIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMI 382
Query: 608 HGCGLYSR 615
G R
Sbjct: 383 SAYGFSGR 390
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Query: 56 LGLCKSTGSLKAFHALLIVDGLTNDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQ 115
L +C+ S+K H + L NT + +V Y + +F M S+
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAVSNT-------TTENVMYVKDMFFKMGKKSLVSWN 278
Query: 116 VMIRWYFLNDLYKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKV 175
VMI Y N + + VE Y M E D + VL AC + + G K+H I +
Sbjct: 279 VMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK 338
Query: 176 G-GPDSFVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLF 234
P+ + L+DMYAKC + +R VF+ ++VVSWT+MI+ Y + + + LF
Sbjct: 339 KLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALF 398
Query: 235 NRMREGFVEGNQITLGSLVTACAKLRALHQGK 266
+++++ + + I + + AC+ L +G+
Sbjct: 399 SKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 318 bits (816), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 200/670 (29%), Positives = 331/670 (49%), Gaps = 123/670 (18%)
Query: 86 LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145
L+ MY G + AR++FD MP+ +++S+ MI Y + + F+ M +R
Sbjct: 68 LLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPER----- 122
Query: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVLTGLVDMYAKCRDIGSSRQVFDE 205
D + +V +AK ++ +R++F+
Sbjct: 123 ---------------------------------DGYSWNVVVSGFAKAGELSVARRLFNA 149
Query: 206 TLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQG 265
+K+VV+ S++ GY+ N A+E L LF + + ITL +++ ACA+L AL G
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKELN---FSADAITLTTVLKACAELEALKCG 206
Query: 266 KWLHGYILKIGIEINSHLVTALLDMYVKCGNIR--------------------------- 298
K +H IL G+E +S + ++L+++Y KCG++R
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 299 ----DARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354
++R +FD + ++ W +MI GY + +AL LF + + + + T+A+V+
Sbjct: 267 GRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVI 325
Query: 355 SASAQLGNLNMGRMVHSLGIRLGL-EDYTVINALVDMYAKCHV----------------- 396
+A LG L G+ +H + GL +D V + L+DMY+KC
Sbjct: 326 NACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTI 385
Query: 397 --------------IADARYIFETTSEKDVIAWNSIISGLDDN----------------- 425
I DA+ +FE K +I+WNS+ +G N
Sbjct: 386 LLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLD 445
Query: 426 VSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSA 485
+ D V+L SVISACAS+ ++++G + A +T GL S V V ++L++ Y KCG +
Sbjct: 446 LPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQV-VSSSLIDLYCKCGFVEHG 504
Query: 486 RMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHT 545
R VFD M + + V W++MI GY G G ++ LF M ++P ++ F +L+AC++
Sbjct: 505 RRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYC 564
Query: 546 GMVGEGWKCFYSMCRDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGA 605
G+V EG K F SM D FVP +H+ CMVDLLARAG +EEA+ +E MP + D S++ +
Sbjct: 565 GLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSS 624
Query: 606 FLHGCGLYSRFDLGEVMIKKMLELHPDKACYYVLVSNLYASDGRWIRVNQVRELMKQRGL 665
L GC +G+ +K++EL P+ + YV +S ++A+ G W VR+LM++ +
Sbjct: 625 ILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNV 684
Query: 666 SKSPGCSLVD 675
+K+PG S D
Sbjct: 685 TKNPGSSWTD 694
Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 118/455 (25%), Positives = 206/455 (45%), Gaps = 56/455 (12%)
Query: 79 NDKCNTKLVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMR 138
+D + L+S Y + G V +R +FD N + MI Y N++ + + + MR
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Query: 139 KRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDSFVL-TGLVDMYAKCRD-- 195
+E D+ + V+ AC L ++ G ++HC K G D V+ + L+DMY+KC
Sbjct: 312 NETRE-DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 196 -----------------------------IGSSRQVFDETLDKNVVSWTSMIAGYVQNDC 226
I +++VF+ +K+++SW SM G+ QN C
Sbjct: 371 EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGC 430
Query: 227 AQEGLVLFNRMREGFVEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA 286
E L F++M + + ++++L S+++ACA + +L G+ + +G++ + + ++
Sbjct: 431 TVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSS 490
Query: 287 LLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPN 346
L+D+Y KCG + R VFD + D V W +MI GY +G +A+ LF A P
Sbjct: 491 LIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPT 550
Query: 347 HVTIASVLSASAQLGNLNMGR-MVHSLGIRLG-LEDYTVINALVDMYAKCHVIADA-RYI 403
+T VL+A G + GR + S+ + G + D + +VD+ A+ + +A +
Sbjct: 551 QITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLV 610
Query: 404 FETTSEKDVIAWNSIISGLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLS 463
E + D W+SI+ G C + G +G + +
Sbjct: 611 EEMPFDVDGSMWSSILRG------------------CVANGYKAMGKKAAEKIIELEPEN 652
Query: 464 SNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTV 498
S YV L +A GD +S+ +V MRE N
Sbjct: 653 SVAYV--QLSAIFATSGDWESSALVRKLMRENNVT 685
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 159/383 (41%), Gaps = 89/383 (23%)
Query: 252 LVTACAKLRALHQGKWLHGYILKIGIEINSHLVTA--LLDMYVKCGNIRDARSVFDELCS 309
L+ +C+ + +G +LK G ++S ++ A LL MY + G + AR++FDE+
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGF-LSSIVIVANHLLQMYSRSGKMGIARNLFDEMPD 90
Query: 310 IDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNLNMGRMV 369
+ SW MI GY SG +L+ F D P
Sbjct: 91 RNYFSWNTMIEGYMNSGEKGTSLRFF------DMMPER---------------------- 122
Query: 370 HSLGIRLGLEDYTVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGL------- 422
D N +V +AK ++ AR +F EKDV+ NS++ G
Sbjct: 123 ----------DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAE 172
Query: 423 -------DDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNF 475
+ N S DA+TL +V+ ACA L A++ G +HA G + + + ++L+N
Sbjct: 173 EALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGG-VECDSKMNSSLVNV 231
Query: 476 YAKCGDAQSARMVFDAMREKN-------------------------------TVTWSAMI 504
YAKCGD + A + + +RE + + W++MI
Sbjct: 232 YAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMI 291
Query: 505 GGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWKCFYSMCRDFKF 564
GY +L LF++M NE + + + +++AC G + G + C+ F
Sbjct: 292 SGYIANNMKMEALVLFNEMRNETREDSRTL-AAVINACIGLGFLETGKQMHCHACK-FGL 349
Query: 565 VPSMKHYVCMVDLLARAGRLEEA 587
+ + ++D+ ++ G EA
Sbjct: 350 IDDIVVASTLLDMYSKCGSPMEA 372
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 84/195 (43%), Gaps = 11/195 (5%)
Query: 434 VSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQSARMVFDAMR 493
V ++ +C+S + + K+G LSS V V LL Y++ G AR +FD M
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMP 89
Query: 494 EKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACSHTGMVGEGWK 553
++N +W+ MI GY G+ G SL F DM+ E + + ++S + G + +
Sbjct: 90 DRNYFSWNTMIEGYMNSGEKGTSLRFF-DMMPER---DGYSWNVVVSGFAKAGELSVARR 145
Query: 554 CFYSMC-RDFKFVPSMKHYVCMVDLLARAGRLEEALEFMENMPIEPDVSLFGAFLHGCGL 612
F +M +D + S+ H + G EEAL + + D L C
Sbjct: 146 LFNAMPEKDVVTLNSLLHGYIL------NGYAEEALRLFKELNFSADAITLTTVLKACAE 199
Query: 613 YSRFDLGEVMIKKML 627
G+ + ++L
Sbjct: 200 LEALKCGKQIHAQIL 214
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 253,767,752
Number of Sequences: 539616
Number of extensions: 10650148
Number of successful extensions: 40223
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 322
Number of HSP's successfully gapped in prelim test: 110
Number of HSP's that attempted gapping in prelim test: 31661
Number of HSP's gapped (non-prelim): 2003
length of query: 691
length of database: 191,569,459
effective HSP length: 124
effective length of query: 567
effective length of database: 124,657,075
effective search space: 70680561525
effective search space used: 70680561525
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)