Query 040398
Match_columns 732
No_of_seqs 596 out of 4845
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 12:45:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040398.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040398hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fih_A Serine/threonine-protei 100.0 3E-46 1E-50 396.6 18.9 198 514-720 74-272 (346)
2 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.9E-46 9.9E-51 390.9 17.3 200 514-720 32-236 (311)
3 4b9d_A Serine/threonine-protei 100.0 6E-46 2E-50 394.9 16.9 202 513-720 23-227 (350)
4 4asz_A BDNF/NT-3 growth factor 100.0 4.7E-46 1.6E-50 390.1 15.8 205 514-721 13-234 (299)
5 4fie_A Serine/threonine-protei 100.0 3E-45 1E-49 398.4 20.4 198 514-720 151-349 (423)
6 4aoj_A High affinity nerve gro 100.0 3.2E-45 1.1E-49 389.0 19.0 205 514-721 41-264 (329)
7 4g3f_A NF-kappa-beta-inducing 100.0 6.5E-45 2.2E-49 385.2 18.4 197 513-721 57-259 (336)
8 3hyh_A Carbon catabolite-derep 100.0 1E-44 3.6E-49 374.0 18.4 198 513-720 12-214 (275)
9 3ubd_A Ribosomal protein S6 ki 100.0 2.8E-45 9.5E-50 383.4 14.0 199 514-720 24-228 (304)
10 4gt4_A Tyrosine-protein kinase 100.0 7.7E-45 2.6E-49 382.5 17.2 205 514-721 26-251 (308)
11 3omv_A RAF proto-oncogene seri 100.0 9.2E-45 3.2E-49 380.4 17.6 199 513-720 35-239 (307)
12 3fpq_A Serine/threonine-protei 100.0 4.5E-44 1.5E-48 372.5 19.4 195 517-720 29-231 (290)
13 4g31_A Eukaryotic translation 100.0 6.2E-43 2.1E-47 366.9 18.2 200 513-719 4-228 (299)
14 3hmm_A TGF-beta receptor type- 100.0 1.2E-42 4E-47 366.4 16.2 200 514-720 3-220 (303)
15 4ase_A Vascular endothelial gr 100.0 9.2E-43 3.1E-47 373.1 14.6 214 505-721 55-291 (353)
16 4b99_A Mitogen-activated prote 100.0 4.7E-41 1.6E-45 366.1 18.4 200 513-720 53-265 (398)
17 4f9c_A Cell division cycle 7-r 100.0 7.9E-41 2.7E-45 360.4 19.8 199 510-720 17-249 (361)
18 3v5w_A G-protein coupled recep 100.0 1.1E-40 3.7E-45 378.4 19.7 198 513-720 188-393 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 7.1E-40 2.4E-44 374.0 20.6 200 513-720 156-358 (573)
20 2qkw_B Protein kinase; three-h 100.0 2.6E-38 8.8E-43 336.8 15.9 215 504-721 29-244 (321)
21 3uim_A Brassinosteroid insensi 100.0 5.4E-38 1.9E-42 335.0 17.7 219 501-719 17-236 (326)
22 4aw2_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 346.7 16.9 210 505-720 65-283 (437)
23 2c30_A Serine/threonine-protei 100.0 6.4E-37 2.2E-41 326.2 22.9 218 494-720 15-243 (321)
24 3fxz_A Serine/threonine-protei 100.0 4.9E-37 1.7E-41 323.3 21.6 199 513-720 19-218 (297)
25 3v8s_A RHO-associated protein 100.0 8.1E-38 2.8E-42 343.2 15.9 207 506-720 61-275 (410)
26 3zgw_A Maternal embryonic leuc 100.0 2.9E-37 1E-41 331.7 17.7 202 512-720 8-212 (347)
27 2vd5_A DMPK protein; serine/th 100.0 1.6E-37 5.3E-42 341.1 15.6 210 505-720 52-272 (412)
28 1o6l_A RAC-beta serine/threoni 100.0 4.6E-37 1.6E-41 329.0 18.7 200 513-720 4-207 (337)
29 3fe3_A MAP/microtubule affinit 100.0 4.7E-37 1.6E-41 327.9 17.4 200 512-720 13-216 (328)
30 4eqm_A Protein kinase; transfe 100.0 6.7E-37 2.3E-41 321.8 18.3 201 513-720 10-214 (294)
31 3s95_A LIMK-1, LIM domain kina 100.0 2.7E-36 9.2E-41 319.5 22.8 202 513-720 9-224 (310)
32 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.3E-37 1.5E-41 331.4 16.5 201 512-720 21-226 (353)
33 2yab_A Death-associated protei 100.0 2.7E-36 9.3E-41 326.1 21.6 200 512-720 10-220 (361)
34 4dc2_A Protein kinase C IOTA t 100.0 8.3E-37 2.8E-41 333.4 17.5 200 513-720 51-255 (396)
35 3rgz_A Protein brassinosteroid 100.0 1.8E-36 6.1E-41 360.3 21.9 294 5-334 380-746 (768)
36 1fot_A TPK1 delta, CAMP-depend 100.0 2.1E-36 7.2E-41 321.4 19.2 197 513-720 5-205 (318)
37 4fr4_A YANK1, serine/threonine 100.0 2.3E-36 7.9E-41 328.7 19.5 199 513-720 14-219 (384)
38 1xjd_A Protein kinase C, theta 100.0 1.7E-36 5.9E-41 325.6 18.3 203 510-720 13-220 (345)
39 3a8x_A Protein kinase C IOTA t 100.0 2.3E-36 8E-41 324.9 18.7 200 513-720 8-212 (345)
40 1tki_A Titin; serine kinase, m 100.0 5.8E-36 2E-40 318.7 20.8 199 513-720 4-205 (321)
41 3c0i_A Peripheral plasma membr 100.0 2.3E-36 7.9E-41 325.9 17.9 204 513-720 23-235 (351)
42 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.7E-36 5.8E-41 328.9 16.3 203 512-720 63-287 (365)
43 2i0e_A Protein kinase C-beta I 100.0 2.9E-36 1E-40 324.8 18.0 201 512-720 18-223 (353)
44 3tki_A Serine/threonine-protei 100.0 4E-36 1.4E-40 320.3 18.0 203 513-722 6-212 (323)
45 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.9E-36 1.7E-40 322.9 18.7 197 513-720 40-240 (350)
46 2y0a_A Death-associated protei 100.0 1.1E-35 3.8E-40 317.3 21.0 199 513-720 10-219 (326)
47 2bdw_A Hypothetical protein K1 100.0 6.7E-36 2.3E-40 323.6 19.3 200 512-720 27-232 (362)
48 1kob_A Twitchin; kinase, intra 100.0 1.1E-35 3.8E-40 324.2 21.2 200 513-720 50-252 (387)
49 3niz_A Rhodanese family protei 100.0 1E-35 3.4E-40 315.5 19.4 202 512-721 19-223 (311)
50 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-35 4.2E-40 335.5 21.1 205 513-721 184-392 (543)
51 2psq_A Fibroblast growth facto 100.0 8.9E-36 3.1E-40 323.6 19.1 206 513-721 80-309 (370)
52 3h4j_B AMPK kdaid, SNF1-like p 100.0 7.5E-36 2.6E-40 319.4 18.0 199 513-721 8-211 (336)
53 3a62_A Ribosomal protein S6 ki 100.0 7.3E-36 2.5E-40 318.9 17.8 200 513-720 16-223 (327)
54 3sxs_A Cytoplasmic tyrosine-pr 100.0 1E-35 3.5E-40 308.0 18.3 201 513-720 7-208 (268)
55 4hcu_A Tyrosine-protein kinase 100.0 5.5E-36 1.9E-40 310.3 16.2 201 513-720 9-210 (269)
56 2r5t_A Serine/threonine-protei 100.0 5.4E-36 1.8E-40 325.1 16.1 200 513-720 37-241 (373)
57 3soa_A Calcium/calmodulin-depe 100.0 1.3E-35 4.4E-40 329.3 19.0 201 512-720 9-215 (444)
58 3qd2_B Eukaryotic translation 100.0 2.3E-35 7.9E-40 314.8 19.8 204 512-719 4-277 (332)
59 2acx_A G protein-coupled recep 100.0 2.2E-35 7.5E-40 334.3 20.2 202 513-721 183-388 (576)
60 2zv2_A Calcium/calmodulin-depe 100.0 2.5E-35 8.5E-40 310.3 19.2 199 513-720 12-242 (298)
61 3p86_A Serine/threonine-protei 100.0 8.5E-36 2.9E-40 315.7 15.7 207 511-721 34-242 (309)
62 3o0g_A Cell division protein k 100.0 3E-35 1E-39 308.7 19.7 197 514-718 2-202 (292)
63 1ob3_A PFPK5, cell division co 100.0 1.6E-35 5.6E-40 310.1 17.1 199 514-720 2-203 (288)
64 4ejn_A RAC-alpha serine/threon 100.0 7.5E-36 2.6E-40 332.7 15.4 200 513-720 147-351 (446)
65 3kul_A Ephrin type-A receptor 100.0 2E-35 6.7E-40 315.2 18.0 202 513-720 48-257 (325)
66 2izr_A Casein kinase I isoform 100.0 2E-35 6.9E-40 315.8 18.0 201 513-722 8-221 (330)
67 3ork_A Serine/threonine protei 100.0 5.7E-36 2E-40 317.3 13.6 201 513-720 11-221 (311)
68 2pmi_A Negative RE, cyclin-dep 100.0 3.3E-35 1.1E-39 312.4 19.3 203 513-720 4-211 (317)
69 2x4f_A Myosin light chain kina 100.0 2.3E-35 8E-40 320.5 18.6 194 519-720 94-290 (373)
70 4euu_A Serine/threonine-protei 100.0 3.3E-35 1.1E-39 312.5 18.8 202 513-720 8-225 (319)
71 3gen_A Tyrosine-protein kinase 100.0 1.7E-35 5.7E-40 309.0 16.2 202 512-720 22-224 (283)
72 3soc_A Activin receptor type-2 100.0 1.4E-35 4.8E-40 315.9 15.7 199 513-721 23-241 (322)
73 2w4o_A Calcium/calmodulin-depe 100.0 2.6E-35 9E-40 317.4 17.9 198 512-720 51-252 (349)
74 2nru_A Interleukin-1 receptor- 100.0 1E-34 3.5E-39 306.8 21.5 215 501-721 12-237 (307)
75 3gni_B Strad alpha; kinase fol 100.0 7.3E-35 2.5E-39 318.8 20.9 204 513-721 24-240 (389)
76 3f3z_A Calcium/calmodulin-depe 100.0 7.1E-35 2.4E-39 303.2 19.5 199 512-720 7-209 (277)
77 3uc3_A Serine/threonine-protei 100.0 4E-35 1.4E-39 317.4 17.5 198 513-720 19-220 (361)
78 2y94_A 5'-AMP-activated protei 100.0 6.1E-35 2.1E-39 326.1 19.4 199 513-720 15-218 (476)
79 3oz6_A Mitogen-activated prote 100.0 6.2E-35 2.1E-39 319.3 18.8 201 511-720 6-233 (388)
80 3vhe_A Vascular endothelial gr 100.0 2E-35 6.8E-40 319.4 14.6 214 505-721 13-299 (359)
81 3ugc_A Tyrosine-protein kinase 100.0 1.6E-35 5.5E-40 311.2 13.4 202 513-720 9-219 (295)
82 3hko_A Calcium/calmodulin-depe 100.0 3E-35 1E-39 316.2 15.7 210 508-720 20-278 (345)
83 2a2a_A Death-associated protei 100.0 9.7E-35 3.3E-39 309.2 19.4 199 513-720 11-220 (321)
84 1vzo_A Ribosomal protein S6 ki 100.0 2.6E-35 9E-40 318.2 15.0 202 513-721 53-265 (355)
85 3p1a_A MYT1 kinase, membrane-a 100.0 3.4E-35 1.2E-39 311.4 15.4 197 513-719 56-256 (311)
86 2qol_A Ephrin receptor; recept 100.0 3.3E-35 1.1E-39 319.5 15.5 202 513-720 44-253 (373)
87 3dls_A PAS domain-containing s 100.0 3.4E-35 1.2E-39 314.6 15.2 200 512-720 22-232 (335)
88 3kn6_A Ribosomal protein S6 ki 100.0 6.2E-35 2.1E-39 311.3 17.0 190 520-720 17-211 (325)
89 3cbl_A C-FES, proto-oncogene t 100.0 2.3E-35 7.9E-40 321.3 13.8 203 513-721 113-319 (377)
90 1luf_A Muscle-specific tyrosin 100.0 4.4E-35 1.5E-39 314.5 15.8 208 511-721 44-280 (343)
91 3llt_A Serine/threonine kinase 100.0 9.4E-35 3.2E-39 314.4 18.5 207 503-720 24-261 (360)
92 2ivs_A Proto-oncogene tyrosine 100.0 6.2E-35 2.1E-39 309.2 16.7 207 512-721 21-256 (314)
93 2eue_A Carbon catabolite derep 100.0 9.8E-35 3.3E-39 301.9 17.6 198 513-720 12-214 (275)
94 3is5_A Calcium-dependent prote 100.0 6.1E-35 2.1E-39 305.3 16.1 202 513-720 21-227 (285)
95 2h34_A Serine/threonine-protei 100.0 1.2E-34 4E-39 307.0 18.4 202 512-720 32-237 (309)
96 3kk8_A Calcium/calmodulin depe 100.0 1.9E-34 6.5E-39 301.0 19.8 200 512-720 4-209 (284)
97 4agu_A Cyclin-dependent kinase 100.0 1.6E-34 5.5E-39 305.9 19.4 200 513-720 2-205 (311)
98 3ttj_A Mitogen-activated prote 100.0 7.7E-35 2.6E-39 325.4 17.8 196 513-720 61-265 (464)
99 3g33_A Cell division protein k 100.0 1.7E-34 5.8E-39 305.4 19.2 201 512-720 7-221 (308)
100 3dtc_A Mitogen-activated prote 100.0 1.1E-34 3.7E-39 300.8 17.1 199 513-720 6-216 (271)
101 3pfq_A PKC-B, PKC-beta, protei 100.0 1.1E-34 3.8E-39 338.1 19.2 202 511-720 338-544 (674)
102 2ac3_A MAP kinase-interacting 100.0 1.2E-34 4.2E-39 307.5 17.8 203 513-722 11-230 (316)
103 3fdn_A Serine/threonine-protei 100.0 1.2E-34 4.2E-39 301.8 17.4 199 512-720 7-209 (279)
104 3tt0_A Basic fibroblast growth 100.0 1.1E-34 3.8E-39 316.5 17.8 206 513-721 68-297 (382)
105 3t9t_A Tyrosine-protein kinase 100.0 5.6E-35 1.9E-39 302.0 14.3 201 513-720 7-208 (267)
106 3q4u_A Activin receptor type-1 100.0 1.8E-34 6.3E-39 303.7 18.5 196 513-720 7-235 (301)
107 3l9p_A Anaplastic lymphoma kin 100.0 3.4E-35 1.2E-39 318.7 13.3 205 513-720 70-289 (367)
108 1csn_A Casein kinase-1; phosph 100.0 2.5E-34 8.5E-39 302.2 19.4 201 513-722 9-222 (298)
109 1qcf_A Haematopoetic cell kina 100.0 5.8E-35 2E-39 326.1 15.4 204 510-720 184-388 (454)
110 1mp8_A Focal adhesion kinase 1 100.0 6.8E-35 2.3E-39 304.2 14.9 202 513-721 14-221 (281)
111 3cok_A Serine/threonine-protei 100.0 1.7E-34 5.9E-39 300.4 18.0 202 513-721 10-215 (278)
112 1nxk_A MAP kinase-activated pr 100.0 2.3E-34 8E-39 315.7 19.8 196 513-720 60-265 (400)
113 3op5_A Serine/threonine-protei 100.0 9E-35 3.1E-39 315.2 16.0 202 512-720 33-263 (364)
114 2yex_A Serine/threonine-protei 100.0 3.1E-34 1E-38 298.0 19.3 204 512-722 5-212 (276)
115 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-34 3.8E-39 311.4 16.1 197 512-720 20-222 (342)
116 3dbq_A Dual specificity protei 100.0 1.1E-34 3.6E-39 312.0 15.9 199 513-720 8-222 (343)
117 3n9x_A Phosphotransferase; mal 100.0 2.2E-34 7.4E-39 319.4 18.8 199 513-719 25-253 (432)
118 3bhy_A Death-associated protei 100.0 3.5E-34 1.2E-38 298.9 19.3 199 513-720 4-213 (283)
119 2rku_A Serine/threonine-protei 100.0 4.1E-34 1.4E-38 300.3 19.9 200 513-720 14-217 (294)
120 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-34 3.6E-39 327.2 16.5 204 512-721 218-423 (495)
121 3kfa_A Tyrosine-protein kinase 100.0 5.7E-35 1.9E-39 305.7 13.2 204 511-720 10-215 (288)
122 3i6u_A CDS1, serine/threonine- 100.0 1.7E-34 5.9E-39 318.8 17.5 200 511-720 132-346 (419)
123 3qup_A Tyrosine-protein kinase 100.0 1.1E-34 3.8E-39 308.8 15.2 209 510-721 19-243 (323)
124 3poz_A Epidermal growth factor 100.0 1.1E-34 3.8E-39 309.7 15.1 202 513-721 14-223 (327)
125 3lm5_A Serine/threonine-protei 100.0 3.5E-34 1.2E-38 305.8 18.9 210 504-720 18-235 (327)
126 3lb7_A RAF proto-oncogene seri 100.0 2.3E-34 8E-39 304.3 17.4 199 513-720 35-239 (307)
127 1rjb_A FL cytokine receptor; k 100.0 1.9E-34 6.5E-39 309.9 16.9 208 512-722 43-279 (344)
128 2owb_A Serine/threonine-protei 100.0 3.5E-34 1.2E-38 306.9 18.9 200 513-720 40-243 (335)
129 1u5q_A Serine/threonine protei 100.0 2.8E-34 9.5E-39 309.1 18.2 195 514-720 54-255 (348)
130 1qpc_A LCK kinase; alpha beta 100.0 3.3E-34 1.1E-38 298.5 18.1 201 513-720 12-213 (279)
131 3rp9_A Mitogen-activated prote 100.0 1.4E-34 4.9E-39 323.5 16.2 194 513-714 52-280 (458)
132 3eb0_A Putative uncharacterize 100.0 2.6E-34 8.9E-39 313.8 17.8 201 510-720 3-244 (383)
133 2vgo_A Serine/threonine-protei 100.0 4.4E-34 1.5E-38 298.5 18.4 198 513-720 13-214 (284)
134 3mtl_A Cell division protein k 100.0 1.3E-34 4.3E-39 308.9 14.4 199 514-720 2-203 (324)
135 1k9a_A Carboxyl-terminal SRC k 100.0 5.7E-34 1.9E-38 317.6 20.3 199 512-722 191-391 (450)
136 3kex_A Receptor tyrosine-prote 100.0 1.4E-34 4.7E-39 308.7 14.6 202 513-721 12-221 (325)
137 2zmd_A Dual specificity protei 100.0 2.3E-34 7.9E-39 314.7 16.7 199 513-720 55-269 (390)
138 2y7j_A Phosphorylase B kinase 100.0 4.6E-34 1.6E-38 309.6 18.8 205 507-720 87-307 (365)
139 3q5i_A Protein kinase; CDPK, m 100.0 3.8E-34 1.3E-38 323.9 18.9 200 511-720 33-249 (504)
140 1x8b_A WEE1HU, WEE1-like prote 100.0 3.4E-34 1.2E-38 299.1 17.1 200 512-719 9-232 (289)
141 2pvf_A Fibroblast growth facto 100.0 4.4E-34 1.5E-38 305.9 18.3 206 513-721 34-263 (334)
142 4e5w_A Tyrosine-protein kinase 100.0 2.4E-34 8.3E-39 303.0 16.0 200 514-719 21-230 (302)
143 4eut_A Serine/threonine-protei 100.0 1.5E-34 5E-39 317.1 14.9 202 513-720 8-225 (396)
144 2jam_A Calcium/calmodulin-depe 100.0 2.7E-34 9.2E-39 303.2 16.3 199 512-720 7-209 (304)
145 1t46_A HOMO sapiens V-KIT hard 100.0 2.8E-34 9.6E-39 304.0 16.5 207 513-722 22-252 (313)
146 2buj_A Serine/threonine-protei 100.0 2.2E-34 7.7E-39 305.6 15.7 205 513-720 28-248 (317)
147 3eqc_A Dual specificity mitoge 100.0 1.7E-34 5.7E-39 312.5 15.0 198 513-720 32-232 (360)
148 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.1E-34 7.2E-39 307.8 15.5 200 512-720 32-240 (329)
149 3a7i_A MST3 kinase, serine/thr 100.0 1.2E-33 4.1E-38 298.1 21.0 199 513-720 21-221 (303)
150 1cm8_A Phosphorylated MAP kina 100.0 3E-34 1E-38 311.3 16.8 195 513-720 24-228 (367)
151 4fvq_A Tyrosine-protein kinase 100.0 1.5E-34 5E-39 302.7 13.7 195 513-718 7-218 (289)
152 3lxl_A Tyrosine-protein kinase 100.0 2.9E-34 1E-38 306.3 16.2 202 513-720 22-232 (327)
153 4aaa_A Cyclin-dependent kinase 100.0 4.2E-34 1.4E-38 305.7 17.4 201 513-721 24-228 (331)
154 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.7E-34 5.8E-39 322.1 14.8 202 512-720 182-384 (452)
155 3byv_A Rhoptry kinase; malaria 100.0 6.5E-35 2.2E-39 317.8 11.0 200 513-721 72-316 (377)
156 3lij_A Calcium/calmodulin depe 100.0 5.6E-34 1.9E-38 321.7 19.1 199 512-720 35-239 (494)
157 3mi9_A Cell division protein k 100.0 9.1E-34 3.1E-38 305.6 19.5 201 513-720 16-231 (351)
158 2v62_A Serine/threonine-protei 100.0 3E-34 1E-38 308.7 15.6 200 513-720 36-262 (345)
159 3pg1_A Mitogen-activated prote 100.0 4.4E-34 1.5E-38 309.4 16.8 208 504-720 12-236 (362)
160 2wqm_A Serine/threonine-protei 100.0 5.7E-34 2E-38 301.5 17.2 204 513-720 31-238 (310)
161 4f0f_A Serine/threonine-protei 100.0 8.9E-34 3E-38 296.5 18.3 199 513-721 18-231 (287)
162 1u59_A Tyrosine-protein kinase 100.0 1.3E-33 4.3E-38 295.5 19.4 201 513-720 8-216 (287)
163 3mwu_A Calmodulin-domain prote 100.0 4.6E-34 1.6E-38 321.8 17.2 199 512-720 20-224 (486)
164 2w5a_A Serine/threonine-protei 100.0 2.3E-34 7.8E-39 299.6 13.4 208 513-721 5-219 (279)
165 1fvr_A Tyrosine-protein kinase 100.0 7E-34 2.4E-38 303.4 17.5 203 513-720 24-244 (327)
166 3nyv_A Calmodulin-domain prote 100.0 3.7E-34 1.3E-38 322.5 16.1 199 512-720 24-229 (484)
167 3lxp_A Non-receptor tyrosine-p 100.0 1E-33 3.5E-38 301.0 18.5 197 516-720 33-239 (318)
168 2xrw_A Mitogen-activated prote 100.0 8.5E-34 2.9E-38 308.3 18.1 196 513-720 24-228 (371)
169 3fme_A Dual specificity mitoge 100.0 3.5E-34 1.2E-38 299.9 14.3 202 513-720 6-215 (290)
170 3cc6_A Protein tyrosine kinase 100.0 4.4E-34 1.5E-38 298.0 14.7 201 513-720 11-217 (281)
171 1ua2_A CAK, cell division prot 100.0 5.3E-34 1.8E-38 306.9 15.7 203 510-720 6-215 (346)
172 3og7_A AKAP9-BRAF fusion prote 100.0 6.8E-34 2.3E-38 298.0 16.1 199 513-720 23-227 (289)
173 1j1b_A Glycogen synthase kinas 100.0 6.3E-34 2.1E-38 314.4 16.6 197 514-720 54-259 (420)
174 2xir_A Vascular endothelial gr 100.0 4.2E-34 1.4E-38 303.1 14.6 213 506-721 19-254 (316)
175 1phk_A Phosphorylase kinase; g 100.0 2.2E-33 7.5E-38 295.1 19.8 200 512-720 15-231 (298)
176 2h6d_A 5'-AMP-activated protei 100.0 8.2E-34 2.8E-38 294.9 16.3 199 513-720 10-213 (276)
177 3an0_A Dual specificity mitoge 100.0 4.1E-34 1.4E-38 306.8 14.5 204 511-720 48-259 (340)
178 2clq_A Mitogen-activated prote 100.0 2.1E-33 7.2E-38 294.6 19.6 201 515-720 23-227 (295)
179 3nsz_A CK II alpha, casein kin 100.0 1.8E-33 6.2E-38 300.3 19.3 192 513-719 35-232 (330)
180 3com_A Serine/threonine-protei 100.0 2E-33 6.9E-38 297.8 19.5 200 512-720 27-227 (314)
181 1p4o_A Insulin-like growth fac 100.0 1.9E-34 6.5E-39 306.8 11.6 211 507-720 18-243 (322)
182 2ycf_A Serine/threonine-protei 100.0 1.1E-33 3.9E-38 301.1 17.5 200 512-721 8-222 (322)
183 3mdy_A Bone morphogenetic prot 100.0 3.5E-33 1.2E-37 298.8 21.3 200 507-715 30-249 (337)
184 1ogq_A PGIP-2, polygalacturona 100.0 8.9E-34 3E-38 300.7 16.5 243 17-275 50-297 (313)
185 2fst_X Mitogen-activated prote 100.0 6.2E-34 2.1E-38 308.6 15.5 195 513-720 28-232 (367)
186 4hgt_A Casein kinase I isoform 100.0 1.7E-33 5.9E-38 295.3 18.4 202 512-722 7-219 (296)
187 3qyz_A Mitogen-activated prote 100.0 1.5E-33 5.2E-38 305.5 18.4 199 513-720 26-234 (364)
188 2pml_X PFPK7, Ser/Thr protein 100.0 1.4E-33 4.7E-38 303.6 17.8 202 513-721 30-255 (348)
189 2a19_B Interferon-induced, dou 100.0 1E-33 3.6E-38 295.2 16.2 197 512-719 9-222 (284)
190 3kmu_A ILK, integrin-linked ki 100.0 1.2E-33 4.2E-38 292.4 16.6 198 513-720 9-213 (271)
191 3lzb_A Epidermal growth factor 100.0 6.6E-34 2.2E-38 303.7 15.0 202 513-721 14-223 (327)
192 1t4h_A Serine/threonine-protei 100.0 3.3E-33 1.1E-37 292.8 19.9 197 515-720 27-231 (290)
193 3uzp_A CKI-delta, CKID, casein 100.0 3E-33 1E-37 293.7 19.6 201 513-722 8-219 (296)
194 2vwi_A Serine/threonine-protei 100.0 6E-34 2E-38 299.9 14.1 206 512-720 13-229 (303)
195 2j7t_A Serine/threonine-protei 100.0 5.8E-34 2E-38 300.1 13.9 201 513-720 18-224 (302)
196 2eva_A TAK1 kinase - TAB1 chim 100.0 1.2E-33 3.9E-38 299.0 16.1 199 513-721 7-206 (307)
197 2r3i_A Cell division protein k 100.0 2.3E-33 7.9E-38 295.1 17.8 201 513-720 2-206 (299)
198 2i1m_A Macrophage colony-stimu 100.0 5.3E-34 1.8E-38 305.0 13.0 207 512-721 44-270 (333)
199 3brb_A Proto-oncogene tyrosine 100.0 1.1E-33 3.7E-38 299.9 15.1 210 509-721 29-253 (313)
200 3kvw_A DYRK2, dual specificity 100.0 3.7E-33 1.3E-37 309.0 20.0 197 513-720 96-301 (429)
201 2h8h_A Proto-oncogene tyrosine 100.0 4.2E-34 1.4E-38 325.3 12.6 203 511-720 264-467 (535)
202 2w1i_A JAK2; chromosomal rearr 100.0 1E-33 3.5E-38 302.0 14.7 202 513-720 40-250 (326)
203 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-33 4.4E-38 301.0 15.4 206 508-720 18-236 (326)
204 2i6l_A Mitogen-activated prote 100.0 2.3E-33 8E-38 297.6 17.3 200 513-721 10-228 (320)
205 4e7w_A Glycogen synthase kinas 100.0 1.8E-33 6.2E-38 308.1 17.0 198 513-720 39-244 (394)
206 1mqb_A Ephrin type-A receptor 100.0 1.8E-33 6.2E-38 301.1 16.5 202 513-720 43-253 (333)
207 3e3p_A Protein kinase, putativ 100.0 1.9E-33 6.5E-38 304.0 16.6 208 506-720 15-234 (360)
208 3c1x_A Hepatocyte growth facto 100.0 1.3E-33 4.4E-38 306.7 15.2 201 515-721 90-300 (373)
209 2ozo_A Tyrosine-protein kinase 100.0 2.4E-33 8.1E-38 323.8 17.9 201 514-721 335-543 (613)
210 2jii_A Serine/threonine-protei 100.0 6.7E-34 2.3E-38 306.8 12.3 198 513-721 41-271 (352)
211 3f66_A Hepatocyte growth facto 100.0 3.2E-33 1.1E-37 293.9 17.0 202 513-720 24-235 (298)
212 1xbb_A Tyrosine-protein kinase 100.0 3E-33 1E-37 293.3 16.5 200 513-720 15-223 (291)
213 3g2f_A Bone morphogenetic prot 100.0 1.4E-33 4.7E-38 302.0 13.9 198 513-719 12-236 (336)
214 1wak_A Serine/threonine-protei 100.0 3E-33 1E-37 306.3 16.9 199 513-722 36-297 (397)
215 3q60_A ROP5B; pseudokinase, tr 100.0 1.9E-33 6.5E-38 305.6 15.0 196 514-721 62-296 (371)
216 1ogq_A PGIP-2, polygalacturona 100.0 4.8E-33 1.7E-37 295.0 17.8 242 4-262 61-308 (313)
217 2yfx_A Tyrosine-protein kinase 100.0 2.2E-33 7.5E-38 299.5 14.9 205 513-720 29-248 (327)
218 2wtk_C Serine/threonine-protei 100.0 9.4E-33 3.2E-37 291.3 19.3 203 512-720 3-215 (305)
219 2b9h_A MAP kinase FUS3, mitoge 100.0 5E-33 1.7E-37 299.8 17.4 199 513-720 10-225 (353)
220 3rgf_A Cyclin-dependent kinase 100.0 3.4E-33 1.2E-37 307.2 15.8 203 513-721 19-239 (405)
221 4exu_A Mitogen-activated prote 100.0 4.7E-33 1.6E-37 302.5 16.6 194 513-720 41-244 (371)
222 1b6c_B TGF-B superfamily recep 100.0 8.4E-33 2.9E-37 296.6 18.4 203 506-720 34-269 (342)
223 3pls_A Macrophage-stimulating 100.0 4.6E-33 1.6E-37 292.5 15.9 198 515-718 22-228 (298)
224 1blx_A Cyclin-dependent kinase 100.0 6E-33 2E-37 295.7 17.0 201 512-720 9-221 (326)
225 1byg_A CSK, protein (C-termina 100.0 2.8E-33 9.4E-38 291.5 14.0 197 513-721 20-218 (278)
226 3ll6_A Cyclin G-associated kin 100.0 2.5E-33 8.6E-38 299.7 13.9 205 513-720 27-255 (337)
227 4fl3_A Tyrosine-protein kinase 100.0 3.9E-33 1.3E-37 322.9 15.8 194 520-721 375-576 (635)
228 3sv0_A Casein kinase I-like; t 100.0 1.8E-32 6E-37 306.7 20.5 201 513-722 6-217 (483)
229 1z57_A Dual specificity protei 100.0 1.7E-32 5.9E-37 293.3 19.2 198 513-721 13-237 (339)
230 3rgz_A Protein brassinosteroid 100.0 2.4E-32 8.4E-37 324.7 22.5 249 5-267 406-725 (768)
231 3cek_A Dual specificity protei 100.0 2E-33 7E-38 297.8 11.9 208 504-720 18-241 (313)
232 1zy4_A Serine/threonine-protei 100.0 1.1E-32 3.9E-37 289.8 16.9 195 512-713 4-226 (303)
233 3gxj_A TGF-beta receptor type- 100.0 1.5E-34 5E-39 304.6 2.1 190 513-714 2-214 (303)
234 1u46_A ACK-1, activated CDC42 100.0 4.9E-33 1.7E-37 291.3 13.4 201 513-720 17-227 (291)
235 2wei_A Calmodulin-domain prote 100.0 9.8E-33 3.4E-37 288.8 15.5 200 511-720 19-224 (287)
236 3coi_A Mitogen-activated prote 100.0 1.1E-32 3.7E-37 297.5 16.2 194 513-720 23-226 (353)
237 3aln_A Dual specificity mitoge 100.0 1.1E-32 3.7E-37 294.1 15.8 202 513-720 21-231 (327)
238 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.8E-33 9.5E-38 297.3 11.0 207 506-721 25-246 (319)
239 2vx3_A Dual specificity tyrosi 100.0 1.6E-32 5.6E-37 299.4 17.2 202 510-720 50-260 (382)
240 3a99_A Proto-oncogene serine/t 100.0 7E-33 2.4E-37 294.8 12.7 203 508-720 37-251 (320)
241 2j0j_A Focal adhesion kinase 1 100.0 1.8E-32 6E-37 318.6 16.4 203 511-720 387-595 (656)
242 2iwi_A Serine/threonine-protei 100.0 7E-33 2.4E-37 293.4 11.8 203 508-720 25-241 (312)
243 1q8y_A SR protein kinase; tran 100.0 2.5E-32 8.7E-37 296.5 15.8 197 513-720 18-237 (373)
244 2rio_A Serine/threonine-protei 100.0 2.4E-32 8.2E-37 303.0 15.6 199 515-720 16-242 (434)
245 2eu9_A Dual specificity protei 100.0 6.7E-32 2.3E-36 290.7 18.3 197 513-720 18-241 (355)
246 3fhr_A MAP kinase-activated pr 100.0 4.1E-32 1.4E-36 290.9 16.1 197 512-720 26-231 (336)
247 2pzi_A Probable serine/threoni 100.0 4.2E-32 1.4E-36 318.1 16.6 192 513-720 79-278 (681)
248 2vuw_A Serine/threonine-protei 100.0 2.6E-33 9E-38 300.2 5.5 191 513-719 19-278 (336)
249 2dyl_A Dual specificity mitoge 100.0 5.3E-32 1.8E-36 287.2 14.5 199 513-720 24-231 (318)
250 3p23_A Serine/threonine-protei 100.0 9E-32 3.1E-36 297.8 15.5 198 513-720 23-232 (432)
251 3qa8_A MGC80376 protein; kinas 100.0 3.2E-32 1.1E-36 311.4 11.4 202 513-720 13-225 (676)
252 3uqc_A Probable conserved tran 100.0 1E-30 3.5E-35 273.4 17.8 173 513-722 30-206 (286)
253 3v47_A TOLL-like receptor 5B a 100.0 5.2E-30 1.8E-34 286.1 22.6 246 5-264 42-389 (455)
254 3dzo_A Rhoptry kinase domain; 100.0 9.9E-31 3.4E-35 288.1 13.7 199 514-721 78-320 (413)
255 4eco_A Uncharacterized protein 100.0 8.8E-31 3E-35 304.5 13.0 223 28-262 194-449 (636)
256 3v47_A TOLL-like receptor 5B a 100.0 1E-29 3.5E-34 283.7 20.9 245 6-264 67-413 (455)
257 3m2w_A MAP kinase-activated pr 100.0 1.4E-29 4.6E-34 266.6 17.9 175 513-720 16-200 (299)
258 4eco_A Uncharacterized protein 100.0 3.9E-30 1.3E-34 299.0 14.2 244 4-266 194-477 (636)
259 2id5_A Lingo-1, leucine rich r 100.0 4.5E-29 1.5E-33 280.4 20.7 216 10-225 49-265 (477)
260 4fcg_A Uncharacterized protein 100.0 7E-29 2.4E-33 264.7 20.6 225 16-259 80-314 (328)
261 4ecn_A Leucine-rich repeat pro 100.0 3E-29 1E-33 297.5 17.2 256 4-264 334-715 (876)
262 2z66_A Variable lymphocyte rec 100.0 7.6E-29 2.6E-33 261.8 17.9 230 17-261 28-263 (306)
263 1xku_A Decorin; proteoglycan, 100.0 7.7E-28 2.6E-32 256.9 25.1 228 17-265 52-282 (330)
264 3zyi_A Leucine-rich repeat-con 100.0 5.2E-28 1.8E-32 269.8 22.6 227 17-259 75-303 (452)
265 2id5_A Lingo-1, leucine rich r 100.0 6.3E-28 2.2E-32 271.0 22.3 234 17-264 32-266 (477)
266 3zyj_A Leucine-rich repeat-con 100.0 7.3E-28 2.5E-32 267.7 22.4 227 17-259 64-292 (440)
267 4ecn_A Leucine-rich repeat pro 100.0 1.1E-28 3.6E-33 292.8 16.2 263 8-277 480-784 (876)
268 2ft3_A Biglycan; proteoglycan, 100.0 2.4E-27 8.3E-32 253.3 24.3 232 9-264 48-282 (332)
269 3t6q_A CD180 antigen; protein- 100.0 6.1E-28 2.1E-32 279.4 21.1 245 5-264 266-518 (606)
270 2z80_A TOLL-like receptor 2, v 100.0 2E-28 7E-33 264.0 14.6 259 14-275 28-307 (353)
271 1ozn_A Reticulon 4 receptor; N 100.0 7.7E-28 2.6E-32 251.4 17.7 224 20-259 14-238 (285)
272 3t6q_A CD180 antigen; protein- 100.0 2.5E-27 8.7E-32 274.2 23.3 234 18-264 255-494 (606)
273 1xku_A Decorin; proteoglycan, 100.0 4.5E-27 1.5E-31 251.0 23.3 241 5-260 64-307 (330)
274 1ozn_A Reticulon 4 receptor; N 100.0 2E-27 6.7E-32 248.3 19.8 239 9-264 26-266 (285)
275 4fcg_A Uncharacterized protein 99.9 2E-27 6.9E-32 253.4 19.3 210 8-221 95-314 (328)
276 4azs_A Methyltransferase WBDD; 99.9 2.3E-29 8E-34 287.1 4.3 185 521-717 241-437 (569)
277 3o6n_A APL1; leucine-rich repe 99.9 3.4E-27 1.2E-31 258.0 20.6 246 9-275 60-324 (390)
278 2ft3_A Biglycan; proteoglycan, 99.9 7.6E-27 2.6E-31 249.5 22.0 244 5-264 66-314 (332)
279 3vq2_A TLR4, TOLL-like recepto 99.9 9.3E-27 3.2E-31 269.5 22.9 98 153-264 392-491 (606)
280 2z7x_B TOLL-like receptor 1, v 99.9 2.9E-27 9.9E-32 268.6 18.2 112 9-125 15-128 (520)
281 3o6n_A APL1; leucine-rich repe 99.9 7E-27 2.4E-31 255.5 20.3 244 14-279 42-305 (390)
282 2z7x_B TOLL-like receptor 1, v 99.9 4.5E-27 1.5E-31 267.0 19.2 255 5-263 33-461 (520)
283 3oja_B Anopheles plasmodium-re 99.9 5.5E-27 1.9E-31 270.7 19.9 206 13-223 71-293 (597)
284 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 7.7E-27 2.6E-31 267.7 20.9 113 9-126 46-160 (562)
285 1ziw_A TOLL-like receptor 3; i 99.9 2.6E-26 8.7E-31 269.5 24.2 239 12-264 324-602 (680)
286 3zyi_A Leucine-rich repeat-con 99.9 3.1E-26 1.1E-30 255.4 23.5 230 18-265 55-285 (452)
287 3j0a_A TOLL-like receptor 5; m 99.9 1E-26 3.4E-31 279.2 20.4 246 5-264 36-356 (844)
288 3oja_B Anopheles plasmodium-re 99.9 1.3E-26 4.3E-31 267.7 20.1 241 15-277 49-309 (597)
289 1wwl_A Monocyte differentiatio 99.9 4.2E-28 1.4E-32 256.9 6.0 242 12-275 38-302 (312)
290 3zyj_A Leucine-rich repeat-con 99.9 5.8E-26 2E-30 252.3 23.5 230 18-265 44-274 (440)
291 2z66_A Variable lymphocyte rec 99.9 6E-27 2.1E-31 247.2 14.4 216 8-224 42-264 (306)
292 1wwl_A Monocyte differentiatio 99.9 3.1E-28 1E-32 258.0 4.3 231 8-260 56-310 (312)
293 2z80_A TOLL-like receptor 2, v 99.9 1.8E-26 6.2E-31 248.7 18.1 239 8-263 45-318 (353)
294 3j0a_A TOLL-like receptor 5; m 99.9 3.5E-26 1.2E-30 274.5 21.5 261 16-276 23-345 (844)
295 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 4.5E-26 1.5E-30 261.3 21.4 125 4-134 63-193 (562)
296 1ziw_A TOLL-like receptor 3; i 99.9 3.1E-26 1E-30 268.8 20.5 252 9-276 19-303 (680)
297 3vq2_A TLR4, TOLL-like recepto 99.9 1.9E-26 6.4E-31 266.9 17.6 240 5-263 274-538 (606)
298 2z81_A CD282 antigen, TOLL-lik 99.9 1.9E-26 6.4E-31 263.6 16.8 266 8-276 19-417 (549)
299 2z81_A CD282 antigen, TOLL-lik 99.9 1.7E-26 5.8E-31 263.9 15.4 128 5-132 38-168 (549)
300 2z62_A TOLL-like receptor 4, v 99.9 1.2E-25 4E-30 233.6 20.3 226 20-262 10-240 (276)
301 2z62_A TOLL-like receptor 4, v 99.9 1.3E-25 4.3E-30 233.4 19.8 215 9-226 22-242 (276)
302 2z63_A TOLL-like receptor 4, v 99.9 1.7E-25 5.9E-30 256.6 20.5 119 130-263 367-487 (570)
303 3oja_A Leucine-rich immune mol 99.9 2.3E-26 8E-31 258.4 11.3 217 15-259 32-250 (487)
304 2z63_A TOLL-like receptor 4, v 99.9 1.3E-25 4.6E-30 257.6 17.2 251 4-275 269-524 (570)
305 4g8a_A TOLL-like receptor 4; l 99.9 7.6E-25 2.6E-29 254.2 23.7 115 11-125 70-186 (635)
306 4g8a_A TOLL-like receptor 4; l 99.9 7.6E-25 2.6E-29 254.2 23.2 145 2-152 43-189 (635)
307 3o53_A Protein LRIM1, AGAP0063 99.9 2.5E-26 8.5E-31 243.9 9.1 220 12-259 29-250 (317)
308 1p9a_G Platelet glycoprotein I 99.9 9.7E-25 3.3E-29 228.4 20.4 205 12-222 5-209 (290)
309 2o6q_A Variable lymphocyte rec 99.9 2E-24 7E-29 223.6 22.6 202 41-259 17-218 (270)
310 4fmz_A Internalin; leucine ric 99.9 1.2E-24 4.2E-29 233.6 21.5 249 9-275 81-339 (347)
311 3bz5_A Internalin-J, INLJ; leu 99.9 1.7E-24 5.9E-29 241.1 23.2 221 5-264 30-251 (457)
312 2o6q_A Variable lymphocyte rec 99.9 2.8E-24 9.6E-29 222.5 22.7 206 18-225 17-222 (270)
313 3bz5_A Internalin-J, INLJ; leu 99.9 3.2E-24 1.1E-28 238.9 24.1 239 5-276 54-293 (457)
314 4fmz_A Internalin; leucine ric 99.9 3.2E-24 1.1E-28 230.3 20.8 221 11-259 104-346 (347)
315 3rfs_A Internalin B, repeat mo 99.9 8.1E-25 2.8E-29 226.9 15.5 221 18-265 20-241 (272)
316 1o6v_A Internalin A; bacterial 99.9 5.9E-24 2E-28 238.0 22.6 196 13-223 64-280 (466)
317 3en9_A Glycoprotease, O-sialog 99.9 1.9E-25 6.5E-30 253.4 9.4 184 518-719 340-539 (540)
318 1o6v_A Internalin A; bacterial 99.9 1.1E-23 3.7E-28 235.8 22.6 220 13-263 86-326 (466)
319 3o53_A Protein LRIM1, AGAP0063 99.9 3.5E-25 1.2E-29 235.0 9.8 232 18-276 11-244 (317)
320 1p9a_G Platelet glycoprotein I 99.9 1.2E-23 4E-28 220.2 21.1 202 37-259 6-208 (290)
321 3rfs_A Internalin B, repeat mo 99.9 3E-24 1E-28 222.6 15.3 205 12-227 36-241 (272)
322 3oja_A Leucine-rich immune mol 99.9 1.7E-24 5.9E-29 243.2 12.1 208 41-275 35-243 (487)
323 4glp_A Monocyte differentiatio 99.9 5E-24 1.7E-28 225.3 13.1 222 18-259 65-307 (310)
324 2ca6_A RAN GTPase-activating p 99.9 1.3E-25 4.6E-30 245.0 -0.1 246 8-263 23-320 (386)
325 2xwt_C Thyrotropin receptor; s 99.9 1.6E-23 5.4E-28 212.7 14.6 206 28-256 22-236 (239)
326 3m19_A Variable lymphocyte rec 99.9 1.2E-22 4.1E-27 207.9 20.3 183 41-226 15-197 (251)
327 1jl5_A Outer protein YOPM; leu 99.9 3.3E-23 1.1E-27 230.6 16.8 215 7-261 24-252 (454)
328 2xwt_C Thyrotropin receptor; s 99.9 3.6E-23 1.2E-27 210.1 15.0 196 18-219 32-237 (239)
329 3m19_A Variable lymphocyte rec 99.9 1.8E-22 6.3E-27 206.5 20.1 182 64-262 14-195 (251)
330 4glp_A Monocyte differentiatio 99.9 2E-23 6.8E-28 220.7 12.6 201 16-222 90-308 (310)
331 1h6u_A Internalin H; cell adhe 99.9 1.1E-22 3.8E-27 214.7 18.2 209 22-262 24-233 (308)
332 3goz_A Leucine-rich repeat-con 99.9 5.9E-25 2E-29 237.7 0.1 253 2-261 7-299 (362)
333 3g06_A SSPH2 (leucine-rich rep 99.9 2E-22 6.9E-27 231.5 21.0 220 8-275 54-290 (622)
334 1h6u_A Internalin H; cell adhe 99.9 7.9E-23 2.7E-27 215.9 15.8 195 13-223 37-232 (308)
335 2ast_B S-phase kinase-associat 99.9 3.6E-24 1.2E-28 228.8 4.2 202 17-218 70-282 (336)
336 1jl5_A Outer protein YOPM; leu 99.9 1.8E-22 6.2E-27 224.6 17.1 224 14-277 8-245 (454)
337 1zar_A RIO2 kinase; serine kin 99.9 1.6E-22 5.3E-27 210.5 11.2 165 506-703 82-274 (282)
338 3cvr_A Invasion plasmid antige 99.9 7.5E-22 2.6E-26 224.0 17.6 183 18-227 60-249 (571)
339 3g06_A SSPH2 (leucine-rich rep 99.9 8.8E-21 3E-25 217.8 22.7 214 18-279 41-271 (622)
340 3goz_A Leucine-rich repeat-con 99.9 4.2E-23 1.4E-27 223.2 1.8 233 21-263 2-270 (362)
341 2o6s_A Variable lymphocyte rec 99.9 3.9E-21 1.3E-25 190.7 14.9 174 43-226 10-183 (208)
342 2o6s_A Variable lymphocyte rec 99.9 5.4E-21 1.8E-25 189.6 15.1 182 19-209 9-190 (208)
343 4ay9_X Follicle-stimulating ho 99.8 9.1E-21 3.1E-25 203.8 17.3 200 20-223 12-217 (350)
344 1z7x_W Ribonuclease inhibitor; 99.8 6.4E-24 2.2E-28 237.1 -7.8 243 8-260 104-384 (461)
345 2ca6_A RAN GTPase-activating p 99.8 5.9E-23 2E-27 224.0 -0.3 217 9-225 52-320 (386)
346 3cvr_A Invasion plasmid antige 99.8 9.5E-21 3.3E-25 215.0 17.4 182 41-264 60-248 (571)
347 2ast_B S-phase kinase-associat 99.8 4.7E-22 1.6E-26 212.3 5.1 222 18-256 48-282 (336)
348 4ay9_X Follicle-stimulating ho 99.8 4.3E-20 1.5E-24 198.5 17.9 221 17-256 30-256 (350)
349 1z7x_W Ribonuclease inhibitor; 99.8 7.3E-23 2.5E-27 228.5 -4.1 184 14-197 25-240 (461)
350 1h6t_A Internalin B; cell adhe 99.8 2.4E-20 8.4E-25 195.0 13.4 191 42-262 26-216 (291)
351 2xot_A Amphoterin-induced prot 99.8 5.2E-20 1.8E-24 198.8 14.5 179 41-222 19-203 (361)
352 1m9s_A Internalin B; cell inva 99.8 5.5E-20 1.9E-24 210.9 13.9 189 19-223 23-212 (605)
353 1h6t_A Internalin B; cell adhe 99.8 1.9E-19 6.5E-24 188.3 16.2 188 20-223 27-215 (291)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 2.8E-19 9.5E-24 179.0 15.7 154 68-224 15-169 (220)
355 1m9s_A Internalin B; cell inva 99.8 7E-20 2.4E-24 210.1 12.8 176 13-202 39-215 (605)
356 2v9t_B SLIT homolog 2 protein 99.8 4.2E-19 1.4E-23 177.7 16.3 153 43-222 14-166 (220)
357 2v9t_B SLIT homolog 2 protein 99.8 4.3E-19 1.5E-23 177.6 15.9 152 19-172 13-164 (220)
358 2xot_A Amphoterin-induced prot 99.8 1.7E-19 5.7E-24 194.8 13.9 178 19-198 20-203 (361)
359 1dce_A Protein (RAB geranylger 99.8 5.5E-22 1.9E-26 226.2 -6.1 125 113-253 442-567 (567)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 5.2E-19 1.8E-23 177.0 15.9 158 41-201 12-170 (220)
361 3e6j_A Variable lymphocyte rec 99.8 1.5E-18 5.1E-23 174.8 17.3 157 41-225 20-176 (229)
362 3e6j_A Variable lymphocyte rec 99.8 1.7E-18 5.8E-23 174.4 16.9 153 91-261 22-174 (229)
363 4ezg_A Putative uncharacterize 99.8 6.4E-19 2.2E-23 173.1 11.5 154 60-221 40-194 (197)
364 4ezg_A Putative uncharacterize 99.8 1.4E-18 4.8E-23 170.7 13.3 153 38-198 41-195 (197)
365 1xeu_A Internalin C; cellular 99.8 6E-19 2E-23 181.6 10.2 168 41-223 20-187 (263)
366 4b8c_D Glucose-repressible alc 99.8 1.1E-19 3.9E-24 213.3 5.1 222 17-259 173-404 (727)
367 1xeu_A Internalin C; cellular 99.8 5.8E-19 2E-23 181.7 9.2 172 62-262 17-188 (263)
368 1zth_A RIO1 serine protein kin 99.8 9.3E-19 3.2E-23 179.6 10.4 139 514-668 47-220 (258)
369 1dce_A Protein (RAB geranylger 99.7 5.6E-21 1.9E-25 217.8 -9.5 185 61-266 346-553 (567)
370 1w8a_A SLIT protein; signaling 99.7 1.2E-17 4.2E-22 163.2 11.3 120 43-165 11-131 (192)
371 4b8c_D Glucose-repressible alc 99.7 1.7E-18 5.7E-23 203.4 5.7 184 32-225 215-408 (727)
372 3ogk_B Coronatine-insensitive 99.7 4.8E-18 1.7E-22 195.6 2.8 239 8-261 261-528 (592)
373 1w8a_A SLIT protein; signaling 99.7 1.2E-16 4E-21 156.2 12.3 132 67-225 11-143 (192)
374 2ell_A Acidic leucine-rich nuc 99.7 1.7E-16 5.7E-21 151.5 11.8 131 89-221 25-160 (168)
375 2ell_A Acidic leucine-rich nuc 99.7 2.5E-16 8.6E-21 150.2 12.2 131 17-149 24-160 (168)
376 3ogk_B Coronatine-insensitive 99.6 1.4E-17 4.7E-22 191.8 1.3 200 15-216 110-326 (592)
377 2je0_A Acidic leucine-rich nuc 99.6 2.1E-16 7.1E-21 147.6 8.9 126 41-168 18-148 (149)
378 2wfh_A SLIT homolog 2 protein 99.6 1.1E-15 3.8E-20 149.4 14.0 127 68-222 14-140 (193)
379 2wfh_A SLIT homolog 2 protein 99.6 1.2E-15 4.1E-20 149.2 13.5 126 42-171 12-137 (193)
380 2je0_A Acidic leucine-rich nuc 99.6 3.5E-16 1.2E-20 146.0 8.7 128 64-216 17-148 (149)
381 4gyi_A RIO2 kinase; protein ki 99.6 1.3E-16 4.5E-21 170.4 6.1 145 508-667 89-265 (397)
382 2o6r_A Variable lymphocyte rec 99.6 2.5E-15 8.5E-20 144.6 14.4 67 159-225 75-141 (177)
383 2o6r_A Variable lymphocyte rec 99.6 2.3E-15 7.8E-20 144.9 13.6 133 66-201 9-141 (177)
384 3sb4_A Hypothetical leucine ri 99.6 9.8E-16 3.3E-20 163.0 9.2 250 5-273 11-325 (329)
385 1ds9_A Outer arm dynein; leuci 99.6 2.2E-17 7.4E-22 162.3 -6.3 144 83-261 43-187 (198)
386 3sb4_A Hypothetical leucine ri 99.6 1.1E-14 3.9E-19 154.7 12.9 221 16-253 48-328 (329)
387 1a9n_A U2A', U2A'; complex (nu 99.6 3.6E-15 1.2E-19 143.4 8.1 134 60-221 15-153 (176)
388 1a9n_A U2A', U2A'; complex (nu 99.6 5.3E-15 1.8E-19 142.2 9.1 137 110-261 17-155 (176)
389 1ds9_A Outer arm dynein; leuci 99.5 1.1E-16 3.9E-21 157.1 -3.6 136 87-264 17-158 (198)
390 2p1m_B Transport inhibitor res 99.5 3.8E-16 1.3E-20 179.8 -3.8 203 41-258 290-518 (594)
391 4fdw_A Leucine rich hypothetic 99.5 5.1E-13 1.8E-17 145.5 19.4 226 12-262 131-361 (401)
392 2p1m_B Transport inhibitor res 99.5 1.2E-14 4E-19 167.2 3.1 126 41-166 106-241 (594)
393 3g39_A Variable lymphocyte rec 99.5 2.7E-13 9.1E-18 129.5 11.8 106 41-149 10-115 (170)
394 3g39_A Variable lymphocyte rec 99.4 4E-13 1.4E-17 128.3 11.7 107 66-199 11-117 (170)
395 2r9u_A Variable lymphocyte rec 99.4 4.4E-13 1.5E-17 128.5 11.8 105 42-149 14-118 (174)
396 2r9u_A Variable lymphocyte rec 99.4 7.5E-13 2.5E-17 126.9 11.9 104 67-197 15-118 (174)
397 4fdw_A Leucine rich hypothetic 99.4 3.7E-12 1.3E-16 138.7 17.9 224 11-258 152-382 (401)
398 3un9_A NLR family member X1; l 99.3 3E-14 1E-18 153.8 -5.0 182 41-222 73-284 (372)
399 3tm0_A Aminoglycoside 3'-phosp 99.3 6.9E-12 2.4E-16 128.4 11.8 148 509-666 9-213 (263)
400 3un9_A NLR family member X1; l 99.3 6.3E-14 2.2E-18 151.2 -3.9 111 63-173 71-196 (372)
401 2ifg_A High affinity nerve gro 99.3 1E-11 3.5E-16 132.8 11.4 104 43-149 11-116 (347)
402 2ifg_A High affinity nerve gro 99.2 1.1E-11 3.7E-16 132.5 9.1 102 68-172 12-115 (347)
403 2jwp_A Malectin, MGC80075; sug 99.2 3.3E-11 1.1E-15 115.0 10.3 126 305-460 7-135 (174)
404 1nd4_A Aminoglycoside 3'-phosp 99.1 3.8E-11 1.3E-15 122.4 6.4 140 513-667 19-215 (264)
405 2ra8_A Uncharacterized protein 98.9 4.4E-10 1.5E-14 120.2 5.8 68 182-259 250-320 (362)
406 3sg8_A APH(2'')-ID; antibiotic 98.9 3.1E-10 1.1E-14 118.8 4.1 187 519-719 25-288 (304)
407 3dxp_A Putative acyl-COA dehyd 98.9 1.4E-09 5E-14 116.6 9.2 144 518-668 42-250 (359)
408 2ra8_A Uncharacterized protein 98.9 4.3E-10 1.5E-14 120.3 4.2 179 60-257 135-341 (362)
409 4fs7_A Uncharacterized protein 98.8 1.1E-07 3.6E-12 103.4 16.5 195 13-218 158-353 (394)
410 4gt6_A Cell surface protein; l 98.7 3.9E-07 1.3E-11 98.9 18.3 84 12-97 82-169 (394)
411 4fs7_A Uncharacterized protein 98.6 3.8E-07 1.3E-11 98.9 13.3 197 11-218 179-376 (394)
412 4gt6_A Cell surface protein; l 98.5 1.6E-06 5.4E-11 94.1 17.3 240 11-275 108-384 (394)
413 3r70_A Aminoglycoside phosphot 98.5 2.9E-07 9.9E-12 96.9 11.1 184 515-715 38-295 (320)
414 3d1u_A Putative fructosamine-3 98.5 5.7E-07 1.9E-11 93.0 11.6 146 516-667 17-217 (288)
415 1io0_A Tropomodulin; LRR prote 98.5 2.6E-08 8.9E-13 96.0 1.1 92 58-149 30-136 (185)
416 1io0_A Tropomodulin; LRR prote 98.5 5E-08 1.7E-12 94.0 3.0 124 106-259 30-164 (185)
417 3rw6_A Nuclear RNA export fact 98.4 1.3E-08 4.4E-13 103.4 -1.8 105 46-153 122-237 (267)
418 4h09_A Hypothetical leucine ri 98.4 6.6E-06 2.2E-10 88.5 18.2 239 12-275 64-339 (379)
419 3rw6_A Nuclear RNA export fact 98.4 3.4E-08 1.2E-12 100.3 -0.1 64 180-252 192-257 (267)
420 3tdw_A Gentamicin resistance p 98.4 2E-06 6.9E-11 89.8 12.3 139 519-669 24-227 (306)
421 4gkh_A Aminoglycoside 3'-phosp 98.3 3.1E-06 1.1E-10 86.4 12.6 137 521-668 31-225 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 4.1E-06 1.4E-10 89.5 11.4 149 515-669 42-246 (362)
423 3ats_A Putative uncharacterize 98.1 2.9E-06 1E-10 90.5 7.0 80 519-598 25-121 (357)
424 4h09_A Hypothetical leucine ri 98.1 4.6E-05 1.6E-09 81.9 16.1 136 105-259 210-345 (379)
425 2q83_A YTAA protein; 2635576, 98.0 3.6E-05 1.2E-09 81.2 12.0 145 519-668 37-254 (346)
426 2olc_A MTR kinase, methylthior 97.9 2.4E-05 8E-10 84.8 9.2 75 519-595 35-120 (397)
427 3f7w_A Putative fructosamine-3 97.8 9.5E-05 3.2E-09 76.2 11.2 79 514-596 15-96 (288)
428 3e4g_A ATP synthase subunit S, 97.8 5E-06 1.7E-10 78.4 1.3 34 185-218 115-149 (176)
429 3e4g_A ATP synthase subunit S, 97.7 7.8E-06 2.7E-10 77.1 1.3 85 113-197 62-153 (176)
430 2pyw_A Uncharacterized protein 97.7 4.8E-05 1.7E-09 83.0 7.7 79 636-715 232-313 (420)
431 3jr1_A Putative fructosamine-3 97.5 0.00042 1.4E-08 72.1 11.9 140 518-662 40-232 (312)
432 1pgv_A TMD-1, tropomodulin TMD 97.3 7.2E-05 2.5E-09 71.8 1.8 65 61-125 38-111 (197)
433 1pgv_A TMD-1, tropomodulin TMD 97.3 5.3E-05 1.8E-09 72.8 0.9 109 41-149 42-170 (197)
434 1zyl_A Hypothetical protein YI 97.3 0.0019 6.4E-08 67.6 12.9 160 504-667 11-224 (328)
435 2ppq_A HSK, HK, homoserine kin 97.2 0.0036 1.2E-07 65.1 14.2 160 504-666 7-217 (322)
436 3csv_A Aminoglycoside phosphot 97.2 0.0014 5E-08 68.7 10.9 146 519-669 23-220 (333)
437 3dxq_A Choline/ethanolamine ki 97.1 0.0012 4.2E-08 68.2 8.7 142 519-669 23-205 (301)
438 1nw1_A Choline kinase (49.2 KD 97.0 0.00058 2E-08 74.5 6.2 73 519-597 78-159 (429)
439 3feg_A Choline/ethanolamine ki 97.0 0.0019 6.5E-08 69.0 9.3 143 519-666 55-254 (379)
440 2qg7_A Ethanolamine kinase PV0 96.8 0.0033 1.1E-07 69.0 9.9 74 519-597 113-188 (458)
441 3i1a_A Spectinomycin phosphotr 96.6 0.011 3.8E-07 62.1 11.9 33 636-668 206-238 (339)
442 3rfe_A Platelet glycoprotein I 96.4 0.005 1.7E-07 54.9 6.8 36 113-148 32-67 (130)
443 3rfe_A Platelet glycoprotein I 96.4 0.0049 1.7E-07 55.0 6.5 55 68-124 12-67 (130)
444 3c5i_A Choline kinase; choline 96.3 0.0039 1.3E-07 66.4 6.4 74 519-597 38-121 (369)
445 3f2s_A CK, chetk-alpha, cholin 95.5 0.023 7.9E-07 60.9 7.8 144 519-666 57-280 (401)
446 3mes_A Choline kinase; malaria 95.3 0.035 1.2E-06 60.1 8.6 142 519-666 75-291 (424)
447 3g15_A CK, chetk-alpha, cholin 91.1 0.41 1.4E-05 51.3 7.9 30 637-666 245-280 (401)
448 2yle_A Protein spire homolog 1 90.5 0.5 1.7E-05 45.5 7.0 101 596-717 34-135 (229)
449 4ann_A ESSB; membrane protein, 90.2 0.72 2.4E-05 44.3 7.8 115 568-719 43-158 (215)
450 4ano_A ESSB; membrane protein, 82.7 2.7 9.1E-05 40.5 7.2 83 568-665 48-132 (219)
451 3cxl_A N-chimerin; SH2, RHO-GA 69.5 0.65 2.2E-05 50.7 -1.3 61 518-581 146-215 (463)
452 1cja_A Protein (actin-fragmin 45.1 45 0.0015 34.1 7.3 141 517-668 72-239 (342)
453 2x6h_A GH13170P, VPS34, phosph 43.3 3.1E+02 0.011 31.0 14.6 83 574-664 477-574 (696)
454 3ls8_A Phosphatidylinositol 3- 42.6 3.8E+02 0.013 29.7 14.9 84 573-664 402-500 (614)
455 2lz0_A Uncharacterized protein 32.0 52 0.0018 27.0 4.6 36 155-191 15-50 (100)
456 2lz0_A Uncharacterized protein 27.4 1.3E+02 0.0043 24.6 6.2 40 57-97 13-52 (100)
No 1
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3e-46 Score=396.64 Aligned_cols=198 Identities=31% Similarity=0.506 Sum_probs=180.3
Q ss_pred CCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEec
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYL 592 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 592 (732)
..|+..++||+|+||.||+|+++ +|+.||||++........+.+.+|++++++++|||||+++++|.+++.+|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 46999999999999999999986 79999999997665556677899999999999999999999999999999999999
Q ss_pred CCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCc
Q 040398 593 ENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT 672 (732)
Q Consensus 593 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~ 672 (732)
++|+|.+++.. ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++++||+|||+|+.......
T Consensus 154 ~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 225 (346)
T 4fih_A 154 EGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 225 (346)
T ss_dssp TTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred CCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence 99999998843 35899999999999999999999996 99999999999999999999999999987654333
Q ss_pred eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 673 HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 673 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||..
T Consensus 226 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 272 (346)
T 4fih_A 226 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 272 (346)
T ss_dssp -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 23457899999999999999999999999999999999999999964
No 2
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.9e-46 Score=390.93 Aligned_cols=200 Identities=26% Similarity=0.394 Sum_probs=180.5
Q ss_pred CCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++++++++|||||++++++.+++.+|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999976 7999999998753 2344578999999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
|||+||+|.+++. ....+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+....
T Consensus 112 Ey~~gG~L~~~i~----~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIR----KIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHH----HHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHH----HcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999994 3456899999999999999999999996 99999999999999999999999999987654
Q ss_pred cCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... ......+||+.|||||++.+..++.++||||+||++|||+||+.||..
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 236 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 332 334457899999999999999999999999999999999999999974
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6e-46 Score=394.94 Aligned_cols=202 Identities=25% Similarity=0.410 Sum_probs=174.0
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
.++|++++.||+|+||.||+|++. +|+.||||++... .....+++.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 368999999999999999999976 7999999998754 2334578999999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
|||+||+|.+++... ....+++..++.|+.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+....
T Consensus 103 Ey~~gg~L~~~i~~~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQ--KGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp ECCTTCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred eCCCCCcHHHHHHHc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence 999999999999543 2345789999999999999999999996 99999999999999999999999999986654
Q ss_pred cCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... .....+||+.|||||++.+..++.++|||||||++|||+||+.||..
T Consensus 178 ~~~-~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~ 227 (350)
T 4b9d_A 178 TVE-LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227 (350)
T ss_dssp HHH-HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred Ccc-cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 222 23346799999999999999999999999999999999999999974
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.7e-46 Score=390.05 Aligned_cols=205 Identities=33% Similarity=0.547 Sum_probs=179.1
Q ss_pred CCCcccceecccCceEEEEEEEc------CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT------DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
++|.+.+.||+|+||.||+|++. +++.||||+++.......++|.+|++++++++|||||+++++|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56778899999999999999863 478999999987766677889999999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCC---------CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEE
Q 040398 588 VYEYLENNSLAHALFGGE---------NSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKI 658 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL 658 (732)
|||||++|+|.++++... .....++|.++.+|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 999999999999996532 23457999999999999999999999986 999999999999999999999
Q ss_pred EeeecceeCCccCce-eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 659 SDFGLAKLDEEEKTH-ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 659 ~DfGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~ 234 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL 234 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 999999865443322 2233568999999999999999999999999999999999 99999753
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3e-45 Score=398.41 Aligned_cols=198 Identities=31% Similarity=0.506 Sum_probs=180.6
Q ss_pred CCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEec
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYL 592 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 592 (732)
+.|+.+++||+|+||.||+|+++ +|+.||||++........+.+.+|++++++++|||||+++++|.+++.+|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999986 79999999998766666677899999999999999999999999999999999999
Q ss_pred CCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCc
Q 040398 593 ENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT 672 (732)
Q Consensus 593 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~ 672 (732)
+||+|.+++.. ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.......
T Consensus 231 ~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 231 EGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp TTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred CCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 99999999843 35899999999999999999999996 99999999999999999999999999987654332
Q ss_pred eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 673 HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 673 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||..
T Consensus 303 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 349 (423)
T 4fie_A 303 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN 349 (423)
T ss_dssp -CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 23457899999999999999999999999999999999999999964
No 6
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.2e-45 Score=389.01 Aligned_cols=205 Identities=30% Similarity=0.511 Sum_probs=173.4
Q ss_pred CCCcccceecccCceEEEEEEEc------CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT------DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
++|.+.++||+|+||.||+|+++ +++.||||+++.......++|.+|++++++++|||||+++++|.+++..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 46677889999999999999864 478999999987766677889999999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCC-----------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCe
Q 040398 588 VYEYLENNSLAHALFGGEN-----------SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP 656 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 656 (732)
|||||++|+|.++++.... ...+++|.++.+|+.|||+||+|||+++ ||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 9999999999999975432 2356999999999999999999999985 9999999999999999999
Q ss_pred EEEeeecceeCCccC-ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 657 KISDFGLAKLDEEEK-THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 657 kL~DfGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
||+|||+|+...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||...
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~ 264 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL 264 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSS
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCC
Confidence 999999998654432 223345679999999999999999999999999999999999 89999753
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.5e-45 Score=385.22 Aligned_cols=197 Identities=27% Similarity=0.314 Sum_probs=171.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
.+.|++.++||+|+||.||+|+++ +|+.||||+++.... ..+|++++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 356788899999999999999986 799999999875432 24699999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC-CeEEEeeecceeCCcc
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL-NPKISDFGLAKLDEEE 670 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kL~DfGla~~~~~~ 670 (732)
|+||+|.+++.. ...+++..+..++.||+.||+|||+++ ||||||||+|||++.++ ++||+|||+|+.....
T Consensus 132 ~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 999999999953 346899999999999999999999986 99999999999999987 6999999999876543
Q ss_pred Cce----eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 671 KTH----ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 671 ~~~----~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
... ....++||+.|||||++.+..++.++|||||||++|||+||+.||...
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~ 259 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQY 259 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 221 122367999999999999999999999999999999999999999753
No 8
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1e-44 Score=373.97 Aligned_cols=198 Identities=29% Similarity=0.474 Sum_probs=162.4
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||+||+|+.. +|+.||+|++.... ....+++.+|++++++++|||||++++++.+++..++|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 368999999999999999999975 79999999987542 33456799999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+ +|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||+++++++||+|||+|+...
T Consensus 92 mEy~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 163 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred EeCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecC
Confidence 9999 6799998843 356999999999999999999999996 9999999999999999999999999998654
Q ss_pred ccCceeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... .....+||+.|||||++.+..+ +.++||||+||++|||+||+.||..
T Consensus 164 ~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 422 2334689999999999998765 6899999999999999999999974
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.8e-45 Score=383.44 Aligned_cols=199 Identities=28% Similarity=0.395 Sum_probs=169.7
Q ss_pred CCCcccceecccCceEEEEEEEc----CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT----DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
++|++.+.||+|+||+||+|+.. +++.||+|+++... .....++.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999862 47899999987542 2334578899999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
|||||+||+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++++||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999943 346899999999999999999999996 999999999999999999999999999864
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
..... .....+||+.|||||++.+..++.++||||+||++|||+||+.||..
T Consensus 177 ~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~ 228 (304)
T 3ubd_A 177 IDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQG 228 (304)
T ss_dssp ----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCC
Confidence 33222 23356899999999999999999999999999999999999999975
No 10
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7.7e-45 Score=382.49 Aligned_cols=205 Identities=31% Similarity=0.449 Sum_probs=176.8
Q ss_pred CCCcccceecccCceEEEEEEEc------CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT------DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLM 586 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 586 (732)
+++++.++||+|+||.||+|++. +++.||||+++... ....++|.+|++++++++|||||+++++|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34567789999999999999862 57899999997643 344678999999999999999999999999999999
Q ss_pred EEEEecCCCchhHHhhcCCC------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC
Q 040398 587 LVYEYLENNSLAHALFGGEN------------SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL 654 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~ 654 (732)
+|||||++|+|.++|+.... ....++|..+.+|+.|||+||+|||+++ ||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCC
Confidence 99999999999999965321 2356899999999999999999999986 99999999999999999
Q ss_pred CeEEEeeecceeCCccC-ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 655 NPKISDFGLAKLDEEEK-THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 655 ~~kL~DfGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
.+||+|||+|+...... ........||+.|||||++.++.++.++|||||||++|||+| |+.||...
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~ 251 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCC
Confidence 99999999998654332 223345679999999999999999999999999999999998 89999753
No 11
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=9.2e-45 Score=380.40 Aligned_cols=199 Identities=31% Similarity=0.522 Sum_probs=167.5
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.+++++.++||+|+||.||+|++++ .||||+++.. .....++|.+|++++++++|||||++++++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4567788999999999999998763 5899998754 33446789999999999999999999998754 56899999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
||++|+|.++++.. ...++|..+.+|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 112 y~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred cCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999999643 346899999999999999999999986 999999999999999999999999999865432
Q ss_pred C-ceeeecccCccccccchhccc---CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 671 K-THISTRVAGTIGYMAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 671 ~-~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
. .......+||+.|||||++.+ ++++.++|||||||++|||+||+.||..
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~ 239 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence 2 223345689999999999864 4689999999999999999999999975
No 12
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-44 Score=372.48 Aligned_cols=195 Identities=31% Similarity=0.459 Sum_probs=168.8
Q ss_pred cccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEe----CCEEEEEE
Q 040398 517 DPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIE----GDQLMLVY 589 (732)
Q Consensus 517 ~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lv~ 589 (732)
++.++||+|+||.||+|++. +++.||+|++... .....++|.+|++++++++|||||+++++|.+ ++.+++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45678999999999999986 6899999998654 33345779999999999999999999999875 35689999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC-CCCeEEEeeecceeCC
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR-DLNPKISDFGLAKLDE 668 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kL~DfGla~~~~ 668 (732)
|||++|+|.+++.. ...+++..+..++.||++||+|||+++ .+||||||||+|||++. ++.+||+|||+|+...
T Consensus 109 Ey~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp ECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred eCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 99999999999953 356899999999999999999999884 35999999999999984 7899999999998644
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.. .....+||+.|||||++.+ .++.++|||||||++|||+||+.||..
T Consensus 184 ~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 184 AS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp TT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 32 2335689999999998865 689999999999999999999999964
No 13
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=6.2e-43 Score=366.90 Aligned_cols=200 Identities=27% Similarity=0.481 Sum_probs=162.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC-------
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD------- 583 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------- 583 (732)
.++|++++.||+|+||+||+|+++ +|+.||||+++... ....+++.+|++++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 356899999999999999999986 79999999987543 334567899999999999999999999987644
Q ss_pred -----EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEE
Q 040398 584 -----QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKI 658 (732)
Q Consensus 584 -----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL 658 (732)
++|+|||||++|+|.+++.... .....++..++.++.||++||+|||+++ ||||||||+|||++.++.+||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRC-TIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCC-SGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcC-CCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEE
Confidence 3799999999999999996532 2234577788999999999999999996 999999999999999999999
Q ss_pred EeeecceeCCccCce-----------eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 659 SDFGLAKLDEEEKTH-----------ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 659 ~DfGla~~~~~~~~~-----------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
+|||+|+........ ..+..+||+.|||||++.+..++.++|||||||++|||++ ||.
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~ 228 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS 228 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCS
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCC
Confidence 999999865432211 1234579999999999999999999999999999999996 775
No 14
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.2e-42 Score=366.40 Aligned_cols=200 Identities=32% Similarity=0.398 Sum_probs=163.4
Q ss_pred CCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC----EEEEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD----QLMLVY 589 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~lv~ 589 (732)
.+|.+.++||+|+||.||+|+++ |+.||||++..... ....+..|+..+.+++|||||+++++|.+++ .+++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 35677889999999999999884 89999999865422 1223345677778899999999999998754 689999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCC-----CCceEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEES-----RFKIVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~-----~~~iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
|||++|+|.++++. ..++|..+.+++.|+++||+|||+++ ..+||||||||+|||+++++++||+|||+|
T Consensus 81 Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999953 35899999999999999999999862 235999999999999999999999999999
Q ss_pred eeCCccCcee---eecccCccccccchhcccC------CCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEKTHI---STRVAGTIGYMAPEYALWG------YLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~~~~---~~~~~gt~~y~APE~~~~~------~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+......... ....+||+.|||||++.+. .++.++|||||||++|||+||+.||..
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~ 220 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 220 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTB
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCc
Confidence 8654433221 2245799999999998754 467899999999999999999887753
No 15
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.2e-43 Score=373.12 Aligned_cols=214 Identities=27% Similarity=0.396 Sum_probs=182.1
Q ss_pred cHHHHHHHhCCCcccceecccCceEEEEEEEc------CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCC-Cceeeee
Q 040398 505 TLKQIRAATSNFDPMNKIGEGGFGPVYKGQLT------DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQH-PNLVKLY 576 (732)
Q Consensus 505 ~~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H-~nIv~l~ 576 (732)
..++++...++|++.+.||+|+||.||+|++. +++.||||++.... ....++|.+|++++.+++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 34455566788999999999999999999864 24689999987653 3445779999999999965 8999999
Q ss_pred eeEEeC-CEEEEEEEecCCCchhHHhhcCCC------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCC
Q 040398 577 GCCIEG-DQLMLVYEYLENNSLAHALFGGEN------------SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDI 643 (732)
Q Consensus 577 ~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dl 643 (732)
++|.++ +.+++|||||++|+|.++|+.... ....+++..+..++.|||+||+|||+++ ||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCcc
Confidence 999764 568999999999999999975422 2345899999999999999999999996 999999
Q ss_pred CCCCeEEcCCCCeEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 644 KATNVLLDRDLNPKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 644 kp~NILl~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
||+|||+++++.+||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999986644333 23344679999999999999999999999999999999998 99999753
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-41 Score=366.08 Aligned_cols=200 Identities=23% Similarity=0.368 Sum_probs=171.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEe------CC
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIE------GD 583 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~ 583 (732)
.++|++++.||+|+||.||+|++. +|+.||||+++... ....+++.+|+++|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 357999999999999999999986 79999999987542 3345678899999999999999999998764 35
Q ss_pred EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 584 QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
.+|+|||||+ |+|.+++. ....+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~----~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIH----SSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CEEEEEECCS-EEHHHHHT----SSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEEEeCCC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecce
Confidence 7899999996 68999884 3457999999999999999999999996 99999999999999999999999999
Q ss_pred ceeCCccC---ceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEK---THISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~---~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|+...... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||..
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g 265 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCC
Confidence 98653321 2233457899999999998875 579999999999999999999999964
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.9e-41 Score=360.35 Aligned_cols=199 Identities=29% Similarity=0.409 Sum_probs=171.2
Q ss_pred HHHhCCCcccceecccCceEEEEEEEc----CCeEEEEEEcccccccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCE
Q 040398 510 RAATSNFDPMNKIGEGGFGPVYKGQLT----DGTIIAVKLLSSKSRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQ 584 (732)
Q Consensus 510 ~~~~~~f~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 584 (732)
....+.|++.+.||+|+||+||+|+.+ +++.||+|++.... ...++.+|+++++.+ +|||||++++++.++++
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 345678999999999999999999763 47899999886543 346788999999998 69999999999999999
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC-CCeEEEeeec
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD-LNPKISDFGL 663 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kL~DfGl 663 (732)
.++||||+++|+|.+++. .+++.+++.++.||+.||+|||++| |+||||||+|||++.+ +.+||+|||+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGl 164 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGL 164 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCC
Confidence 999999999999999882 4889999999999999999999996 9999999999999887 7899999999
Q ss_pred ceeCCccCc---------------------------eeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCC
Q 040398 664 AKLDEEEKT---------------------------HISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGK 715 (732)
Q Consensus 664 a~~~~~~~~---------------------------~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~ 715 (732)
|+....... ......+||+.|+|||++.+. .++.++||||+||++|||+||+
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~ 244 (361)
T 4f9c_A 165 AQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244 (361)
T ss_dssp CEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTC
T ss_pred CcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCC
Confidence 976543211 112235799999999999875 5899999999999999999999
Q ss_pred CCCCC
Q 040398 716 NNMSY 720 (732)
Q Consensus 716 ~P~~~ 720 (732)
.||..
T Consensus 245 ~Pf~~ 249 (361)
T 4f9c_A 245 YPFYK 249 (361)
T ss_dssp SSSSC
T ss_pred CCCCC
Confidence 99953
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.1e-40 Score=378.43 Aligned_cols=198 Identities=28% Similarity=0.371 Sum_probs=172.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHH---HHHHHHHhcCCCCceeeeeeeEEeCCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREF---LNEIGTISCLQHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~---~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 585 (732)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....... .+++++++.++|||||+++++|.+++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 568999999999999999999986 79999999986431 1222223 3446777888999999999999999999
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
|+|||||+||+|.+++.. ...+++..++.++.||+.||+|||+++ ||||||||+|||++.+|++||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~----~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceee
Confidence 999999999999999943 456899999999999999999999996 9999999999999999999999999998
Q ss_pred eCCccCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
...... ....+||+.|||||++.. ..++.++|||||||++|||++|+.||..
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~ 393 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 765432 234689999999999974 5799999999999999999999999964
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=7.1e-40 Score=373.97 Aligned_cols=200 Identities=25% Similarity=0.432 Sum_probs=180.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+++.+++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999986 7999999999876666677889999999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC--CCeEEEeeecceeCCc
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD--LNPKISDFGLAKLDEE 669 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~--~~~kL~DfGla~~~~~ 669 (732)
|+||+|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+....
T Consensus 236 ~~gg~L~~~i~~---~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 236 MSGGELFEKVAD---EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp CCCCBHHHHHTC---TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred cCCCcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 999999998843 2346899999999999999999999996 9999999999999864 7899999999987765
Q ss_pred cCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... ....+||+.|||||++.+..++.++||||+||++|||++|+.||..
T Consensus 310 ~~~--~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~ 358 (573)
T 3uto_A 310 KQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGG 358 (573)
T ss_dssp TSE--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCc--eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 332 2346799999999999999999999999999999999999999964
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.6e-38 Score=336.83 Aligned_cols=215 Identities=46% Similarity=0.813 Sum_probs=189.5
Q ss_pred ccHHHHHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC
Q 040398 504 FTLKQIRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD 583 (732)
Q Consensus 504 ~~~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 583 (732)
+++.++..++++|+..+.||+|+||.||+|++++++.||||++........+.+.+|++++++++||||+++++++.+.+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34445556788999999999999999999998889999999988766666788999999999999999999999999999
Q ss_pred EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 584 QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
..++||||+++|+|.+++.........+++..+..++.||++||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccc
Confidence 999999999999999999765555567999999999999999999999986 99999999999999999999999999
Q ss_pred ceeCCccC-ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 664 AKLDEEEK-THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 664 a~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
+....... ........||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~ 244 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS 244 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccccc
Confidence 97644322 22233456899999999999999999999999999999999999999753
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.4e-38 Score=334.95 Aligned_cols=219 Identities=44% Similarity=0.775 Sum_probs=195.1
Q ss_pred cccccHHHHHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccc-cchHHHHHHHHHHhcCCCCceeeeeeeE
Q 040398 501 ASSFTLKQIRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSR-QGNREFLNEIGTISCLQHPNLVKLYGCC 579 (732)
Q Consensus 501 ~~~~~~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 579 (732)
...++.+++....++|++.+.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 356788999999999999999999999999999988899999999876532 2344789999999999999999999999
Q ss_pred EeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEE
Q 040398 580 IEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKIS 659 (732)
Q Consensus 580 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~ 659 (732)
.+++..++||||+++|+|.+++.........+++..+..++.||+.||+|||+.+..+|+||||||+|||+++++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998776666779999999999999999999999822339999999999999999999999
Q ss_pred eeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 660 DFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 660 DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
|||++...............||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 999998776555555555679999999999998899999999999999999999999995
No 22
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=6.2e-38 Score=346.72 Aligned_cols=210 Identities=25% Similarity=0.331 Sum_probs=183.5
Q ss_pred cHHHHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEE
Q 040398 505 TLKQIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCI 580 (732)
Q Consensus 505 ~~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 580 (732)
.++++....++|++.++||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+.++..++||||++++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34555667889999999999999999999987 58999999987532 222344889999999999999999999999
Q ss_pred eCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEe
Q 040398 581 EGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISD 660 (732)
Q Consensus 581 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~D 660 (732)
+++..++|||||++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcc
Confidence 999999999999999999999542 346899999999999999999999986 99999999999999999999999
Q ss_pred eecceeCCccCceeeecccCccccccchhcc-----cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 661 FGLAKLDEEEKTHISTRVAGTIGYMAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 661 fGla~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
||+|+.............+||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~ 283 (437)
T 4aw2_A 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA 283 (437)
T ss_dssp CTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred hhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCC
Confidence 9999876555444445578999999999987 56789999999999999999999999964
No 23
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.4e-37 Score=326.15 Aligned_cols=218 Identities=30% Similarity=0.492 Sum_probs=186.7
Q ss_pred ccCcccccccccHHHHHHHhCC----------CcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHH
Q 040398 494 LEGLEFQASSFTLKQIRAATSN----------FDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIG 562 (732)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~----------f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~ 562 (732)
...+.++...++.+++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~ 94 (321)
T 2c30_A 15 TENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVV 94 (321)
T ss_dssp ----------CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHH
T ss_pred ccceeecCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHH
Confidence 3334455667888888887764 777789999999999999987 79999999998766666788999999
Q ss_pred HHhcCCCCceeeeeeeEEeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCC
Q 040398 563 TISCLQHPNLVKLYGCCIEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRD 642 (732)
Q Consensus 563 ~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~D 642 (732)
++++++||||+++++++...+..++||||+++++|.+++.. ..+++..+..++.||++||+|||+.+ |+|||
T Consensus 95 ~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~D 166 (321)
T 2c30_A 95 IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQG---VIHRD 166 (321)
T ss_dssp HHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred HHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCC
Confidence 99999999999999999999999999999999999998842 36899999999999999999999986 99999
Q ss_pred CCCCCeEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 643 IKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 643 lkp~NILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|||+||+++.++.+||+|||++......... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 167 lkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~ 243 (321)
T 2c30_A 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFS 243 (321)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCHHHEEECCCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999865543222 2346799999999999999999999999999999999999999964
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.9e-37 Score=323.33 Aligned_cols=199 Identities=28% Similarity=0.486 Sum_probs=179.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 468999999999999999999875 7899999998776666677899999999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccC
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEK 671 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~ 671 (732)
+++|+|.+++.. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 99 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp CTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred CCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 999999999843 25889999999999999999999996 9999999999999999999999999988665433
Q ss_pred ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 672 THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 672 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 171 ~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 218 (297)
T 3fxz_A 171 SK-RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218 (297)
T ss_dssp CC-BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cc-cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 32 2346799999999999999999999999999999999999999964
No 25
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=8.1e-38 Score=343.17 Aligned_cols=207 Identities=24% Similarity=0.361 Sum_probs=181.3
Q ss_pred HHHHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEe
Q 040398 506 LKQIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIE 581 (732)
Q Consensus 506 ~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 581 (732)
++++....++|++.+.||+|+||.||+|+.+ +++.||+|++... .....+.+.+|+++++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556789999999999999999999986 6899999998652 12234557899999999999999999999999
Q ss_pred CCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEee
Q 040398 582 GDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDF 661 (732)
Q Consensus 582 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~Df 661 (732)
++..++||||+++|+|.+++.. ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEecc
Confidence 9999999999999999999853 35889999999999999999999996 999999999999999999999999
Q ss_pred ecceeCCccCceeeecccCccccccchhcccCC----CCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 662 GLAKLDEEEKTHISTRVAGTIGYMAPEYALWGY----LTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 662 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|+++.............+||+.|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 999876654444444678999999999998655 78999999999999999999999964
No 26
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=331.67 Aligned_cols=202 Identities=24% Similarity=0.396 Sum_probs=169.4
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
..++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 4678999999999999999999975 79999999987543 234567899999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 99999999998843 346899999999999999999999996 99999999999999999999999999876544
Q ss_pred cCceeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.........+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 212 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDD 212 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 33333345679999999999987765 8999999999999999999999975
No 27
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=341.12 Aligned_cols=210 Identities=25% Similarity=0.319 Sum_probs=182.6
Q ss_pred cHHHHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEE
Q 040398 505 TLKQIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCI 580 (732)
Q Consensus 505 ~~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 580 (732)
.+++.....++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|.+++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 34555566789999999999999999999986 79999999986531 223345788999999999999999999999
Q ss_pred eCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEe
Q 040398 581 EGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISD 660 (732)
Q Consensus 581 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~D 660 (732)
+++..++||||+++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++++||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEee
Confidence 999999999999999999999532 236899999999999999999999986 99999999999999999999999
Q ss_pred eecceeCCccCceeeecccCccccccchhcc-------cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 661 FGLAKLDEEEKTHISTRVAGTIGYMAPEYAL-------WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 661 fGla~~~~~~~~~~~~~~~gt~~y~APE~~~-------~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
||+++.............+||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 272 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCC
Confidence 9999876554443344568999999999987 35789999999999999999999999964
No 28
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.6e-37 Score=329.05 Aligned_cols=200 Identities=28% Similarity=0.376 Sum_probs=177.2
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467899999999999999999986 7999999998754 233456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 999999999998843 346899999999999999999999996 9999999999999999999999999997543
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 207 (337)
T 1o6l_A 157 SDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 207 (337)
T ss_dssp CTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCC
Confidence 3222 22346799999999999999999999999999999999999999964
No 29
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.7e-37 Score=327.92 Aligned_cols=200 Identities=28% Similarity=0.430 Sum_probs=176.8
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
..++|++.+.||+|+||.||+|++. +|+.||||++... .....+++.+|+++++.++||||+++++++.+++..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 3568999999999999999999984 8999999998754 333456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++++|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 93 MEYASGGEVFDYLVA----HGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp ECCCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EECCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 999999999999843 346899999999999999999999996 9999999999999999999999999997554
Q ss_pred ccCceeeecccCccccccchhcccCCCC-CchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLT-YKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~-~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... .....+||+.|+|||++.+..+. .++||||+||++|||++|+.||..
T Consensus 166 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 216 (328)
T 3fe3_A 166 VGG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216 (328)
T ss_dssp SSC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence 322 23456799999999999887765 799999999999999999999974
No 30
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.7e-37 Score=321.82 Aligned_cols=201 Identities=30% Similarity=0.425 Sum_probs=172.2
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+++.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999976 78999999885432 23356789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++++|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIES----HGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 999999999999843 346899999999999999999999996 9999999999999999999999999997654
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
...........||+.|+|||.+.+..++.++|||||||++|||+||+.||..
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 214 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCS
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 4333333446799999999999999999999999999999999999999975
No 31
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-36 Score=319.51 Aligned_cols=202 Identities=32% Similarity=0.518 Sum_probs=178.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
.++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 457888999999999999999986 6899999998776666778899999999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccC
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEK 671 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~ 671 (732)
+++++|.+++... ...+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 89 IKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp CTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred cCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 9999999999542 346899999999999999999999996 9999999999999999999999999998654332
Q ss_pred cee-------------eecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 672 THI-------------STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 672 ~~~-------------~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... .....||+.|+|||++.+..++.++|||||||++|||++|..|+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~ 224 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD 224 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence 211 1145799999999999999999999999999999999999999875
No 32
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=331.43 Aligned_cols=201 Identities=27% Similarity=0.437 Sum_probs=172.8
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLM 586 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 586 (732)
..++|++.+.||+|+||.||+|+.+ +|+.||+|++... .....+.+.+|.+++..+ +||||+++++++.+++..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 4578999999999999999999986 6899999998753 233456788999999988 7999999999999999999
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++.
T Consensus 101 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999999843 346899999999999999999999996 99999999999999999999999999975
Q ss_pred CCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 667 DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 667 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 226 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence 33222 223346799999999999988999999999999999999999999964
No 33
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=2.7e-36 Score=326.07 Aligned_cols=200 Identities=25% Similarity=0.365 Sum_probs=177.4
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccccc------chHHHHHHHHHHhcCCCCceeeeeeeEEeCCE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQ------GNREFLNEIGTISCLQHPNLVKLYGCCIEGDQ 584 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 584 (732)
..+.|++.+.||+|+||.||+|+.+ +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3567999999999999999999986 7999999998754321 34778999999999999999999999999999
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC----CeEEEe
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL----NPKISD 660 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kL~D 660 (732)
.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+++++ .+||+|
T Consensus 90 ~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred EEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 9999999999999999943 346899999999999999999999996 99999999999998876 799999
Q ss_pred eecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 661 FGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 661 fGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 163 FG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~ 220 (361)
T 2yab_A 163 FGLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (361)
T ss_dssp CSSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 99998765432 22346799999999999998999999999999999999999999964
No 34
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=8.3e-37 Score=333.37 Aligned_cols=200 Identities=27% Similarity=0.416 Sum_probs=175.0
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+.+|..++.++ +||||+++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467999999999999999999986 68999999987542 23345678899999887 89999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++..
T Consensus 131 V~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEcCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 9999999999998843 346899999999999999999999996 999999999999999999999999999753
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 204 ~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 204 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp CCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred ccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 2222 223456899999999999999999999999999999999999999964
No 35
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.8e-36 Score=360.28 Aligned_cols=294 Identities=26% Similarity=0.359 Sum_probs=245.3
Q ss_pred CcccCCccCCC--CCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCC
Q 040398 5 LPGTLPPQIVN--LPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIP 81 (732)
Q Consensus 5 ~~g~lP~~l~~--l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 81 (732)
++|.+|+.+.. +++|++|+|++|++++.+|..+..+ +|++|+|++|++++.+|..++++++|++|+|++|.+++.+|
T Consensus 380 l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p 459 (768)
T 3rgz_A 380 FSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 459 (768)
T ss_dssp EEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred cCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCC
Confidence 56778888877 8889999999999888888888887 79999999999888888888888999999999999888888
Q ss_pred ccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccC
Q 040398 82 RELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDK 161 (732)
Q Consensus 82 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 161 (732)
..+..+++|++|+|++|++++.+|..+.++++|+.|+|++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++
T Consensus 460 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 539 (768)
T 3rgz_A 460 QELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTT
T ss_pred HHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCC
Confidence 88888889999999999988888888888899999999999988888888888899999999999998888888888899
Q ss_pred CCeeeccCcCCCCCCcc---------------------------------------------------------------
Q 040398 162 LNQLRISDLQGPNQTFP--------------------------------------------------------------- 178 (732)
Q Consensus 162 L~~L~ls~N~l~~~~~~--------------------------------------------------------------- 178 (732)
|+.|++++|.+.+..+.
T Consensus 540 L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 619 (768)
T 3rgz_A 540 LIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRV 619 (768)
T ss_dssp CCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCE
T ss_pred CCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccce
Confidence 99999988877643222
Q ss_pred -------cccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeE
Q 040398 179 -------MLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSL 251 (732)
Q Consensus 179 -------~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~L 251 (732)
.+..+++|+.|+|++|+++|.+|..++++++|+.|+|++|+++|.+|+. ++++++|+.|
T Consensus 620 ~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~--------------l~~L~~L~~L 685 (768)
T 3rgz_A 620 YGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDE--------------VGDLRGLNIL 685 (768)
T ss_dssp EEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGG--------------GGGCTTCCEE
T ss_pred ecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChH--------------HhCCCCCCEE
Confidence 3445678999999999999999999999999999999999999999976 7888999999
Q ss_pred EccCCcCcCCCCCCccccCCCCcccccccccCCCCCCcccccccCCCCCCcceeEEEecCCCeeeecCceecCCCCCCCC
Q 040398 252 DLSYNNFTWQSPEQPACREKPNLNLNLFRSSSVENNFGVFPCTNNFTCHRYWHSLHINCGGGNVKVNDSTFEGDAGVGGG 331 (732)
Q Consensus 252 dLs~N~l~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~c~~~~~s~~i~c~~~~~~~~~~~~~~~~~~~g~ 331 (732)
|||+|+++|.+|.... .+..| .....+.++..|.+|...++ .++....|.||+++||.
T Consensus 686 dLs~N~l~g~ip~~l~--~l~~L---~~L~ls~N~l~g~iP~~~~~-----------------~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 686 DLSSNKLDGRIPQAMS--ALTML---TEIDLSNNNLSGPIPEMGQF-----------------ETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp ECCSSCCEECCCGGGG--GCCCC---SEEECCSSEEEEECCSSSSG-----------------GGSCGGGGCSCTEEEST
T ss_pred ECCCCcccCcCChHHh--CCCCC---CEEECcCCcccccCCCchhh-----------------ccCCHHHhcCCchhcCC
Confidence 9999999999986432 12222 12234566677777765443 57778899999999997
Q ss_pred cce
Q 040398 332 AAT 334 (732)
Q Consensus 332 ~~~ 334 (732)
+..
T Consensus 744 ~l~ 746 (768)
T 3rgz_A 744 PLP 746 (768)
T ss_dssp TSC
T ss_pred CCc
Confidence 643
No 36
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-36 Score=321.43 Aligned_cols=197 Identities=26% Similarity=0.440 Sum_probs=176.3
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 457899999999999999999986 79999999987542 23456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 999999999999953 346899999999999999999999986 9999999999999999999999999998654
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 205 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 32 2345799999999999999999999999999999999999999964
No 37
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=328.70 Aligned_cols=199 Identities=28% Similarity=0.449 Sum_probs=176.2
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467899999999999999999976 6899999998653 233457789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 94 ~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp ECCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 999999999999853 346899999999999999999999996 9999999999999999999999999998765
Q ss_pred ccCceeeecccCccccccchhccc---CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... .....+||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 167 ~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~ 219 (384)
T 4fr4_A 167 RET--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI 219 (384)
T ss_dssp TTC--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCC--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence 432 2345679999999999874 4589999999999999999999999974
No 38
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.7e-36 Score=325.57 Aligned_cols=203 Identities=29% Similarity=0.431 Sum_probs=176.9
Q ss_pred HHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCE
Q 040398 510 RAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQ 584 (732)
Q Consensus 510 ~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 584 (732)
....++|++.+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+..|.+++..+ +||||+++++++.+++.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345789999999999999999999986 78999999987542 33456678899999877 99999999999999999
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
.++||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhh
Confidence 9999999999999999843 346899999999999999999999996 999999999999999999999999999
Q ss_pred eeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 166 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (345)
T 1xjd_A 166 KENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220 (345)
T ss_dssp BCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence 75432222 23456799999999999999999999999999999999999999964
No 39
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.3e-36 Score=324.86 Aligned_cols=200 Identities=27% Similarity=0.416 Sum_probs=176.0
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|.+++.++ +||||+++++++.+++..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 457889999999999999999986 68999999987542 23345688899999988 89999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++..
T Consensus 88 v~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 9999999999998843 346899999999999999999999996 999999999999999999999999999753
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 161 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 161 LRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp CCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cCCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 32222 23356799999999999999999999999999999999999999964
No 40
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-36 Score=318.72 Aligned_cols=199 Identities=21% Similarity=0.312 Sum_probs=176.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999986 68999999987543 3356788999999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC--CCCeEEEeeecceeCCc
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR--DLNPKISDFGLAKLDEE 669 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~--~~~~kL~DfGla~~~~~ 669 (732)
+++++|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+|||++. ++.+||+|||++.....
T Consensus 83 ~~g~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 83 ISGLDIFERINT---SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCBHHHHHTS---SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred CCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 999999999843 2346899999999999999999999996 999999999999987 78999999999987654
Q ss_pred cCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 157 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 205 (321)
T 1tki_A 157 GDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLA 205 (321)
T ss_dssp TCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred CCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcC
Confidence 332 2345699999999999988899999999999999999999999964
No 41
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.3e-36 Score=325.95 Aligned_cols=204 Identities=24% Similarity=0.363 Sum_probs=177.4
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-----ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-----RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLM 586 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 586 (732)
.+.|++.+.||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 457899999999999999999876 78999999986421 224577899999999999999999999999999999
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC---eEEEeeec
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN---PKISDFGL 663 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kL~DfGl 663 (732)
+||||+++++|.+.+.........+++..+..++.||++||+|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999887544334456899999999999999999999996 999999999999987654 99999999
Q ss_pred ceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 180 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (351)
T 3c0i_A 180 AIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG 235 (351)
T ss_dssp CEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred eeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCC
Confidence 987654322 22345799999999999999999999999999999999999999964
No 42
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=328.86 Aligned_cols=203 Identities=18% Similarity=0.205 Sum_probs=173.7
Q ss_pred HhCCCcccceecccCceEEEEEE------EcCCeEEEEEEcccccccchHHHHHHHHHHhcCC---CCceeeeeeeEEeC
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQ------LTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ---HPNLVKLYGCCIEG 582 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~------~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~ 582 (732)
..++|.+.+.||+|+||.||+|. ..+++.||+|++.... ..++.+|+++++.++ |+||+++++++..+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 35678999999999999999994 3468999999987543 456677777777776 99999999999999
Q ss_pred CEEEEEEEecCCCchhHHhhcCC-CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC---------
Q 040398 583 DQLMLVYEYLENNSLAHALFGGE-NSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR--------- 652 (732)
Q Consensus 583 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~--------- 652 (732)
+..++||||+++|+|.+++.... .....+++..++.++.||++||+|||+.+ |+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccc
Confidence 99999999999999999996432 23456999999999999999999999986 999999999999998
Q ss_pred --CCCeEEEeeecceeCCc-cCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 653 --DLNPKISDFGLAKLDEE-EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 653 --~~~~kL~DfGla~~~~~-~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++.+||+|||+|+.... .........+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 89999999999975432 223334456799999999999999999999999999999999999999853
No 43
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.9e-36 Score=324.80 Aligned_cols=201 Identities=26% Similarity=0.397 Sum_probs=176.7
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLM 586 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 586 (732)
..++|++.+.||+|+||.||+|+.+ +|+.||+|++... .....+.+.+|.+++..+ +||+|+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4678999999999999999999987 5889999998754 223456788999999988 8999999999999999999
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++.
T Consensus 98 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 99999999999999843 346899999999999999999999996 99999999999999999999999999975
Q ss_pred CCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 667 DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 667 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 171 NIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp CCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 332222 23346799999999999999999999999999999999999999974
No 44
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4e-36 Score=320.28 Aligned_cols=203 Identities=30% Similarity=0.441 Sum_probs=174.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc-cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR-QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999986 789999999865432 334668899999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++++|.+++. ....+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~----~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 86 YCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp CCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred cCCCCcHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 999999999883 3446899999999999999999999986 999999999999999999999999999765432
Q ss_pred Cc-eeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 671 KT-HISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 671 ~~-~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
.. .......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||....
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 212 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 22 22335679999999999987765 779999999999999999999997543
No 45
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.9e-36 Score=322.95 Aligned_cols=197 Identities=25% Similarity=0.351 Sum_probs=176.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 467999999999999999999986 79999999986532 23456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 120 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~ 192 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR----IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192 (350)
T ss_dssp EECCTTCBHHHHHHH----HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceecc
Confidence 999999999999853 346899999999999999999999996 9999999999999999999999999998654
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 193 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 240 (350)
T 1rdq_E 193 GR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp SC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence 32 2245799999999999999999999999999999999999999964
No 46
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=317.28 Aligned_cols=199 Identities=25% Similarity=0.369 Sum_probs=176.3
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc------cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR------QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 585 (732)
.+.|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456889999999999999999986 689999999875422 1357789999999999999999999999999999
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC----CeEEEee
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL----NPKISDF 661 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kL~Df 661 (732)
++||||+++++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 999999999999999843 346899999999999999999999986 99999999999999887 7999999
Q ss_pred ecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 662 GLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 662 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|++........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 163 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 219 (326)
T 2y0a_A 163 GLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219 (326)
T ss_dssp TTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred CCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCC
Confidence 99987643322 2345799999999999989999999999999999999999999964
No 47
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.7e-36 Score=323.57 Aligned_cols=200 Identities=25% Similarity=0.371 Sum_probs=176.1
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
..++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4568999999999999999999886 78999999987542 33456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC---CeEEEeeecce
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL---NPKISDFGLAK 665 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kL~DfGla~ 665 (732)
|||+++|+|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+|||++.++ .+||+|||++.
T Consensus 107 ~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999998843 346899999999999999999999996 99999999999998654 59999999997
Q ss_pred eCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 180 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 232 (362)
T 2bdw_A 180 EVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232 (362)
T ss_dssp CCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 654322 22346799999999999998999999999999999999999999964
No 48
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-35 Score=324.17 Aligned_cols=200 Identities=25% Similarity=0.399 Sum_probs=178.1
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
.+.|++.+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 467999999999999999999886 7899999999876555567889999999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC--CCCeEEEeeecceeCCc
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR--DLNPKISDFGLAKLDEE 669 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~--~~~~kL~DfGla~~~~~ 669 (732)
+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||++.....
T Consensus 130 ~~gg~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~ 203 (387)
T 1kob_A 130 LSGGELFDRIAA---EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203 (387)
T ss_dssp CCCCBHHHHTTC---TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCT
T ss_pred CCCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCC
Confidence 999999998843 2346899999999999999999999996 999999999999974 46799999999987654
Q ss_pred cCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 204 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 252 (387)
T 1kob_A 204 DEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAG 252 (387)
T ss_dssp TSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred Ccc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCC
Confidence 332 2234699999999999999999999999999999999999999974
No 49
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1e-35 Score=315.46 Aligned_cols=202 Identities=29% Similarity=0.440 Sum_probs=173.2
Q ss_pred HhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccc--cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSR--QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
..++|++.+.||+|+||.||+|++.+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 3578999999999999999999998899999999875432 23467889999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||+++ +|.+.+.. ....+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 99 e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 99 EFMEK-DLKKVLDE---NKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp ECCSE-EHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred cCCCC-CHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99985 88887743 2345899999999999999999999996 99999999999999999999999999986643
Q ss_pred cCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...
T Consensus 172 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 223 (311)
T 3niz_A 172 PVRS-YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGV 223 (311)
T ss_dssp CCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred Cccc-ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCC
Confidence 3222 234568999999999876 56899999999999999999999999753
No 50
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.2e-35 Score=335.54 Aligned_cols=205 Identities=28% Similarity=0.408 Sum_probs=182.0
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467899999999999999999986 79999999986532 23456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++.........+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999999765544567999999999999999999999996 9999999999999999999999999998765
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
..... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 341 ~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp TTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred CCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 43322 23457999999999999999999999999999999999999999753
No 51
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=8.9e-36 Score=323.64 Aligned_cols=206 Identities=26% Similarity=0.445 Sum_probs=177.2
Q ss_pred hCCCcccceecccCceEEEEEEEc--------CCeEEEEEEccccc-ccchHHHHHHHHHHhcC-CCCceeeeeeeEEeC
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT--------DGTIIAVKLLSSKS-RQGNREFLNEIGTISCL-QHPNLVKLYGCCIEG 582 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~--------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 582 (732)
.++|++.+.||+|+||.||+|++. ++..||||+++... ....+++.+|+++++++ +||||+++++++.++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467889999999999999999852 45689999997653 33456799999999999 899999999999999
Q ss_pred CEEEEEEEecCCCchhHHhhcCCC------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE
Q 040398 583 DQLMLVYEYLENNSLAHALFGGEN------------SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL 650 (732)
Q Consensus 583 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl 650 (732)
+..++||||+++|+|.+++..... ....+++..+..++.||++||+|||+++ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 999999999999999999965432 2345899999999999999999999996 9999999999999
Q ss_pred cCCCCeEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 651 DRDLNPKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 651 ~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
+.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~ 309 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 309 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999986544322 12223457889999999999999999999999999999999 99999754
No 52
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.5e-36 Score=319.40 Aligned_cols=199 Identities=26% Similarity=0.425 Sum_probs=174.4
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|.+.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 468999999999999999999974 7899999998653 223346789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+ +|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||++....
T Consensus 88 ~E~~-~g~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~ 159 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE----KKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159 (336)
T ss_dssp ECCC-CEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTT
T ss_pred EECC-CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceecc
Confidence 9999 6789888743 346899999999999999999999996 9999999999999999999999999997654
Q ss_pred ccCceeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
... .....+||+.|+|||++.+..+ ++++|||||||++|+|++|+.||...
T Consensus 160 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~ 211 (336)
T 3h4j_B 160 DGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211 (336)
T ss_dssp TSB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred CCc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence 432 2234579999999999988765 78999999999999999999999753
No 53
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=7.3e-36 Score=318.86 Aligned_cols=200 Identities=27% Similarity=0.427 Sum_probs=166.9
Q ss_pred hCCCcccceecccCceEEEEEEE----cCCeEEEEEEccccc----ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQL----TDGTIIAVKLLSSKS----RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQ 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 584 (732)
.++|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|++++++++||||+++++++.+++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46789999999999999999987 478999999987542 2334567889999999999999999999999999
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
.++||||+++++|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER----EGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 9999999999999999843 346889999999999999999999996 999999999999999999999999998
Q ss_pred eeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 169 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 169 KESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 75432222 22346799999999999999999999999999999999999999974
No 54
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1e-35 Score=308.04 Aligned_cols=201 Identities=32% Similarity=0.523 Sum_probs=178.7
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEec
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYL 592 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 592 (732)
.++|++.+.||+|+||.||+|+.+++..||+|++..... ..+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467889999999999999999999888999999875433 3567899999999999999999999999999999999999
Q ss_pred CCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCc
Q 040398 593 ENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT 672 (732)
Q Consensus 593 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~ 672 (732)
++++|.+++.. ....+++..++.++.||++||+|||+.+ |+||||||+||+++.++.++|+|||++........
T Consensus 86 ~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 159 (268)
T 3sxs_A 86 SNGCLLNYLRS---HGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY 159 (268)
T ss_dssp TTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred CCCcHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence 99999999853 2345899999999999999999999996 99999999999999999999999999987655444
Q ss_pred eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 673 HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 673 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
.......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDL 208 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccc
Confidence 43444557778999999998899999999999999999999 9999974
No 55
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.5e-36 Score=310.32 Aligned_cols=201 Identities=30% Similarity=0.528 Sum_probs=177.7
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEec
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYL 592 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 592 (732)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 457889999999999999999998899999999875433 3567999999999999999999999999999999999999
Q ss_pred CCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCc
Q 040398 593 ENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT 672 (732)
Q Consensus 593 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~ 672 (732)
++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 88 ~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 161 (269)
T 4hcu_A 88 EHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 161 (269)
T ss_dssp TTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccc
Confidence 999999998542 346899999999999999999999996 99999999999999999999999999976554333
Q ss_pred eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 673 HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 673 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
.......+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~ 210 (269)
T 4hcu_A 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210 (269)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCC
Confidence 33334557788999999999999999999999999999999 9999975
No 56
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.4e-36 Score=325.06 Aligned_cols=200 Identities=28% Similarity=0.404 Sum_probs=166.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHH-HhcCCCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGT-ISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999986 68999999987543 2234456677776 577899999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 9999999999998843 346889999999999999999999996 999999999999999999999999998753
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 190 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 241 (373)
T 2r5t_A 190 IEHN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241 (373)
T ss_dssp BCCC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccCC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 2221 223456799999999999999999999999999999999999999964
No 57
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=329.27 Aligned_cols=201 Identities=23% Similarity=0.348 Sum_probs=175.3
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
..++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4678999999999999999999875 79999999987543 23456789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEc---CCCCeEEEeeecce
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAK 665 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~---~~~~~kL~DfGla~ 665 (732)
|||+++|+|.+.+.. ...+++..+..++.||++||+|||+++ |+||||||+|||++ +++.+||+|||++.
T Consensus 89 ~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999998853 346899999999999999999999996 99999999999998 45789999999997
Q ss_pred eCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||..
T Consensus 162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~ 215 (444)
T 3soa_A 162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 215 (444)
T ss_dssp CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 6554332 22346799999999999998999999999999999999999999954
No 58
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.3e-35 Score=314.82 Aligned_cols=204 Identities=24% Similarity=0.436 Sum_probs=173.0
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC------
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD------ 583 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 583 (732)
..++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||++++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 4567999999999999999999987 79999999987543 334578999999999999999999999986643
Q ss_pred ---------------------------------------------------EEEEEEEecCCCchhHHhhcCCCCcccCC
Q 040398 584 ---------------------------------------------------QLMLVYEYLENNSLAHALFGGENSQLKLN 612 (732)
Q Consensus 584 ---------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~ 612 (732)
..++||||+++++|.+++..... ....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~ 162 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDRE 162 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSC
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchh
Confidence 38999999999999999966432 34567
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCc-----------eeeecccCc
Q 040398 613 WSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT-----------HISTRVAGT 681 (732)
Q Consensus 613 ~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~-----------~~~~~~~gt 681 (732)
+..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++....... .......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 8889999999999999999996 99999999999999999999999999986654321 122335699
Q ss_pred cccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 682 IGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 682 ~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
+.|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~ 277 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM 277 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh
Confidence 99999999999999999999999999999999987763
No 59
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.2e-35 Score=334.32 Aligned_cols=202 Identities=31% Similarity=0.417 Sum_probs=179.1
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.. +|+.||+|++... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 567999999999999999999986 7999999998653 233456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++...
T Consensus 263 mEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp ECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecc
Confidence 99999999999886432 335899999999999999999999996 9999999999999999999999999998765
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
.... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 338 ~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~ 388 (576)
T 2acx_A 338 EGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388 (576)
T ss_dssp TTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred cCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 4322 23457999999999999989999999999999999999999999753
No 60
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-35 Score=310.28 Aligned_cols=199 Identities=28% Similarity=0.394 Sum_probs=168.7
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc--------------------------cchHHHHHHHHHHh
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR--------------------------QGNREFLNEIGTIS 565 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~--------------------------~~~~~~~~E~~~l~ 565 (732)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999875 789999999865421 11356889999999
Q ss_pred cCCCCceeeeeeeEEe--CCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCC
Q 040398 566 CLQHPNLVKLYGCCIE--GDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDI 643 (732)
Q Consensus 566 ~l~H~nIv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dl 643 (732)
+++||||+++++++.+ .+..++||||+++++|.+++ ....+++..+..++.||++||+|||+++ |+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-----TLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-----CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCC
Confidence 9999999999999987 56899999999999998765 2346899999999999999999999996 999999
Q ss_pred CCCCeEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhcccCC---CCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 644 KATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGY---LTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 644 kp~NILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~---~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
||+||+++.++.+||+|||++......... .....||+.|+|||.+.+.. .+.++|||||||++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 999999999999999999999866543322 23467999999999987654 47889999999999999999999964
No 61
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.5e-36 Score=315.67 Aligned_cols=207 Identities=32% Similarity=0.519 Sum_probs=169.8
Q ss_pred HHhCCCcccceecccCceEEEEEEEcCCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
...++|++.+.||+|+||.||+|+. +|+.||||++.... ....+++.+|++++++++||||+++++++.+.+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3466889999999999999999987 48899999987543 33446789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++.... ....+++..++.++.||++||+|||+.+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp EECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred EecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999996432 1234899999999999999999999883 239999999999999999999999999997543
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 191 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~ 242 (309)
T 3p86_A 191 STFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242 (309)
T ss_dssp ------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred cccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 3221 223456999999999999999999999999999999999999999753
No 62
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3e-35 Score=308.66 Aligned_cols=197 Identities=24% Similarity=0.412 Sum_probs=170.3
Q ss_pred CCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999986 68999999987543 2334678899999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++ ++.+.+.. ....+++..++.++.||++||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~-~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS---CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHH---TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9976 55555532 2346899999999999999999999996 999999999999999999999999999865433
Q ss_pred CceeeecccCccccccchhcccCC-CCCchhHHHHHHHHHHHHcCCCCC
Q 040398 671 KTHISTRVAGTIGYMAPEYALWGY-LTYKADVYSFGVVALEIVSGKNNM 718 (732)
Q Consensus 671 ~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvll~elltG~~P~ 718 (732)
.. ......||+.|+|||++.+.. ++.++|||||||++|||++|..||
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~ 202 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCS
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCC
Confidence 22 223457899999999998765 799999999999999999999886
No 63
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.6e-35 Score=310.13 Aligned_cols=199 Identities=30% Similarity=0.438 Sum_probs=170.0
Q ss_pred CCCcccceecccCceEEEEEEEcCCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
++|++.+.||+|+||.||+|+..+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5789999999999999999999889999999986543 23357789999999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccC
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEK 671 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~ 671 (732)
+++ +|.+++... ...+++..+..++.||++||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 975 899888532 346889999999999999999999996 9999999999999999999999999987543322
Q ss_pred ceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 672 THISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 672 ~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
. ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPG 203 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 1 12234689999999998764 589999999999999999999999964
No 64
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=7.5e-36 Score=332.65 Aligned_cols=200 Identities=27% Similarity=0.373 Sum_probs=166.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.. +|+.||||++... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999976 7899999998753 233446678999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHh-CCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHE-ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
|||+++|+|.+++.. ...+++..+..++.||++||+|||+ .+ |+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 999999999998843 3468999999999999999999998 75 999999999999999999999999999754
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 300 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 351 (446)
T 4ejn_A 300 IKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN 351 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 33222 23346799999999999999999999999999999999999999964
No 65
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=315.21 Aligned_cols=202 Identities=32% Similarity=0.493 Sum_probs=173.2
Q ss_pred hCCCcccceecccCceEEEEEEEc----CCeEEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT----DGTIIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|++.+.||+|+||.||+|++. .+..||||++... .....+.+.+|++++++++||||+++++++.+++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 457889999999999999999874 3556999998764 33445789999999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++++|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 99999999999998532 346899999999999999999999996 999999999999999999999999999876
Q ss_pred CccCce--eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 668 EEEKTH--ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 668 ~~~~~~--~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
...... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~ 257 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWN 257 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 543222 2223446778999999998999999999999999999999 9999964
No 66
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2e-35 Score=315.76 Aligned_cols=201 Identities=24% Similarity=0.280 Sum_probs=175.1
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... .+.+.+|+++++++ +||||+++++++..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 467899999999999999999974 799999999865432 34688999999999 99999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC-----eEEEeeecce
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN-----PKISDFGLAK 665 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~-----~kL~DfGla~ 665 (732)
|+ +++|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 86 LL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred eC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 99 99999998543 347899999999999999999999996 999999999999998887 9999999998
Q ss_pred eCCccCce------eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 666 LDEEEKTH------ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 666 ~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~ 221 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK 221 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence 65332221 1234679999999999999999999999999999999999999998643
No 67
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.7e-36 Score=317.25 Aligned_cols=201 Identities=24% Similarity=0.388 Sum_probs=167.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc---cchHHHHHHHHHHhcCCCCceeeeeeeEEeCC----E
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR---QGNREFLNEIGTISCLQHPNLVKLYGCCIEGD----Q 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~ 584 (732)
.++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|++++++++||||+++++++...+ .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 568999999999999999999974 789999999876432 33457889999999999999999999987654 3
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
.++||||+++++|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 4999999999999999843 346899999999999999999999996 999999999999999999999999999
Q ss_pred eeCCccCce--eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEKTH--ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~~~--~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
......... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~ 221 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 765443221 22335689999999999999999999999999999999999999974
No 68
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.3e-35 Score=312.37 Aligned_cols=203 Identities=29% Similarity=0.467 Sum_probs=161.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467899999999999999999876 68999999987543 3345778999999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcC--CCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 591 YLENNSLAHALFGG--ENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 591 ~~~~gsL~~~l~~~--~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|++ ++|.+++... ......+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 5999988543 122345899999999999999999999986 9999999999999999999999999998654
Q ss_pred ccCceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 211 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPG 211 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 3322 22345689999999998764 689999999999999999999999964
No 69
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=320.54 Aligned_cols=194 Identities=28% Similarity=0.458 Sum_probs=168.0
Q ss_pred cceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEecCCCch
Q 040398 519 MNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYLENNSL 597 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 597 (732)
.+.||+|+||.||+|+.. +|+.||+|++........+++.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 568999999999999875 7899999999876656677899999999999999999999999999999999999999999
Q ss_pred hHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE--cCCCCeEEEeeecceeCCccCceee
Q 040398 598 AHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL--DRDLNPKISDFGLAKLDEEEKTHIS 675 (732)
Q Consensus 598 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl--~~~~~~kL~DfGla~~~~~~~~~~~ 675 (732)
.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++....... .
T Consensus 174 ~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~ 245 (373)
T 2x4f_A 174 FDRIID---ESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--L 245 (373)
T ss_dssp HHHHHH---TGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--C
T ss_pred HHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--c
Confidence 998853 2346899999999999999999999996 9999999999999 5667899999999987654332 2
Q ss_pred ecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 676 TRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 676 ~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 290 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLG 290 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 235699999999999999999999999999999999999999964
No 70
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-35 Score=312.52 Aligned_cols=202 Identities=24% Similarity=0.332 Sum_probs=174.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC--EEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD--QLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lv 588 (732)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 457889999999999999999986 68999999987543 344577889999999999999999999998765 78999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE----cCCCCeEEEeeecc
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL----DRDLNPKISDFGLA 664 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kL~DfGla 664 (732)
|||+++++|.+++.... ....+++..++.++.||++||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 99999999999996432 2234899999999999999999999996 9999999999999 77788999999999
Q ss_pred eeCCccCceeeecccCccccccchhcc--------cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEKTHISTRVAGTIGYMAPEYAL--------WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~~~~~~~~~gt~~y~APE~~~--------~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+....... .....||+.|+|||++. +..++.++|||||||++|||+||+.||..
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 225 (319)
T 4euu_A 164 RELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (319)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEEC
T ss_pred eecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 87654332 23456999999999886 57889999999999999999999999963
No 71
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.7e-35 Score=308.97 Aligned_cols=202 Identities=26% Similarity=0.477 Sum_probs=175.3
Q ss_pred HhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
..++|++.+.||+|+||.||+|++.++..||+|++..... ..+++.+|++++++++||||+++++++.+++..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3567889999999999999999999889999999875433 357789999999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccC
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEK 671 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~ 671 (732)
+++++|.+++... ...+++..++.++.||++||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 174 (283)
T 3gen_A 101 MANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 174 (283)
T ss_dssp CTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred cCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence 9999999998542 346899999999999999999999996 9999999999999999999999999997654433
Q ss_pred ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 672 THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 672 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
........+|+.|+|||++.+..++.++||||||+++|||+| |+.||..
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~ 224 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 332333457788999999998899999999999999999998 9999975
No 72
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-35 Score=315.93 Aligned_cols=199 Identities=32% Similarity=0.453 Sum_probs=169.9
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC----EEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD----QLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~lv 588 (732)
.++|++.+.||+|+||.||+|++. ++.||||++..... ....+.+|+.++++++||||+++++++.+.. ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 467889999999999999999876 79999999865432 3345667999999999999999999998743 47999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC----------CCCceEeCCCCCCCeEEcCCCCeEE
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE----------SRFKIVHRDIKATNVLLDRDLNPKI 658 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~----------~~~~iiH~Dlkp~NILl~~~~~~kL 658 (732)
|||+++|+|.+++.. ..+++..++.++.||++||+|||+. + |+||||||+|||++.++.+||
T Consensus 101 ~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 101 TAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEE
T ss_pred EecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEE
Confidence 999999999999953 3489999999999999999999987 5 999999999999999999999
Q ss_pred EeeecceeCCccCc-eeeecccCccccccchhccc-----CCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 659 SDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 659 ~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
+|||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 241 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 99999976544322 12233579999999999886 35667889999999999999999999753
No 73
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=317.38 Aligned_cols=198 Identities=28% Similarity=0.401 Sum_probs=160.5
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
..+.|++.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4568999999999999999999987 68899999987543 34668899999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC---CCCeEEEeeecceeC
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR---DLNPKISDFGLAKLD 667 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kL~DfGla~~~ 667 (732)
|+++++|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+|||++. ++.+||+|||+++..
T Consensus 129 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 129 LVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp CCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred eCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 9999999999843 345899999999999999999999996 999999999999975 789999999999765
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 202 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 252 (349)
T 2w4o_A 202 EHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred Cccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 4322 22345799999999999998999999999999999999999999964
No 74
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1e-34 Score=306.78 Aligned_cols=215 Identities=44% Similarity=0.694 Sum_probs=186.3
Q ss_pred cccccHHHHHHHhCCCccc------ceecccCceEEEEEEEcCCeEEEEEEccccc----ccchHHHHHHHHHHhcCCCC
Q 040398 501 ASSFTLKQIRAATSNFDPM------NKIGEGGFGPVYKGQLTDGTIIAVKLLSSKS----RQGNREFLNEIGTISCLQHP 570 (732)
Q Consensus 501 ~~~~~~~~~~~~~~~f~~~------~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~ 570 (732)
...+++.++..++++|... +.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4678899999999999887 8999999999999987 57899999986532 23457789999999999999
Q ss_pred ceeeeeeeEEeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE
Q 040398 571 NLVKLYGCCIEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL 650 (732)
Q Consensus 571 nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl 650 (732)
||+++++++.+.+..++||||+++++|.+++.... ....+++..+..++.||++||+|||+.+ |+||||||+||++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG-GCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999985432 2346899999999999999999999986 9999999999999
Q ss_pred cCCCCeEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 651 DRDLNPKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 651 ~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
++++.+||+|||++........ .......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~ 237 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH 237 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccC
Confidence 9999999999999986544322 22334579999999998765 5789999999999999999999999753
No 75
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.3e-35 Score=318.81 Aligned_cols=204 Identities=19% Similarity=0.276 Sum_probs=176.3
Q ss_pred hCCCcccceeccc--CceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMNKIGEG--GFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G--~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|++.+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 5678999999999 99999999987 79999999987543 3345678889999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++|+|.+++.... ...+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 999999999999986432 245899999999999999999999996 999999999999999999999999988643
Q ss_pred CccCc------eeeecccCccccccchhccc--CCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 668 EEEKT------HISTRVAGTIGYMAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 668 ~~~~~------~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 22111 11122468999999999987 57899999999999999999999999753
No 76
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.1e-35 Score=303.20 Aligned_cols=199 Identities=25% Similarity=0.329 Sum_probs=176.5
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
..++|++.+.||+|+||.||+|+.. ++..+|+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3567899999999999999999986 578999999887666667889999999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE---cCCCCeEEEeeecceeC
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLD 667 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kL~DfGla~~~ 667 (732)
|+++++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.++|+|||++...
T Consensus 87 ~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 9999999998843 345899999999999999999999996 9999999999999 78889999999999865
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
..... .....||+.|+|||.+.+ .++.++||||||+++|||++|+.||..
T Consensus 160 ~~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (277)
T 3f3z_A 160 KPGKM--MRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSA 209 (277)
T ss_dssp CTTSC--BCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cCccc--hhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCC
Confidence 54322 234569999999998865 489999999999999999999999975
No 77
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4e-35 Score=317.39 Aligned_cols=198 Identities=26% Similarity=0.381 Sum_probs=165.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 568999999999999999999987 78999999987543 2346788999999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC--eEEEeeecceeCCc
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN--PKISDFGLAKLDEE 669 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~--~kL~DfGla~~~~~ 669 (732)
+++|+|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++. +||+|||+++....
T Consensus 98 ~~~~~L~~~l~~----~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 98 ASGGELYERICN----AGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp CCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999998843 346899999999999999999999986 999999999999988765 99999999874322
Q ss_pred cCceeeecccCccccccchhcccCCCCCc-hhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGYLTYK-ADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k-~DvwSlGvll~elltG~~P~~~ 720 (732)
.. ......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||..
T Consensus 171 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (361)
T 3uc3_A 171 HS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-
T ss_pred cC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCC
Confidence 21 2234569999999999988777655 8999999999999999999975
No 78
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=6.1e-35 Score=326.05 Aligned_cols=199 Identities=27% Similarity=0.460 Sum_probs=176.4
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467899999999999999999986 79999999987542 23356789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++. ....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 95 ~E~~~gg~L~~~l~----~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 95 MEYVSGGELFDYIC----KNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EECCSSEEHHHHTT----SSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EeCCCCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 99999999999984 3456899999999999999999999986 9999999999999999999999999998765
Q ss_pred ccCceeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... .....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 168 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 218 (476)
T 2y94_A 168 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218 (476)
T ss_dssp TTC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence 422 2234579999999999988765 6899999999999999999999975
No 79
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.2e-35 Score=319.26 Aligned_cols=201 Identities=27% Similarity=0.425 Sum_probs=163.6
Q ss_pred HHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCC-CCceeeeeeeEEeCC--E
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQ-HPNLVKLYGCCIEGD--Q 584 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~ 584 (732)
...++|++.+.||+|+||.||+|.+. +|+.||||++... .....+++.+|+.+++.+. ||||+++++++..++ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 35678999999999999999999875 7899999998643 3344567889999999997 999999999998654 7
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
.++|||||+ ++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|
T Consensus 86 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999997 589998843 36889999999999999999999996 999999999999999999999999999
Q ss_pred eeCCcc--------------------CceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEE--------------------KTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~--------------------~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+..... ........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 764321 1112234679999999999886 6789999999999999999999999964
No 80
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2e-35 Score=319.40 Aligned_cols=214 Identities=27% Similarity=0.407 Sum_probs=180.3
Q ss_pred cHHHHHHHhCCCcccceecccCceEEEEEEE------cCCeEEEEEEccccc-ccchHHHHHHHHHHhcC-CCCceeeee
Q 040398 505 TLKQIRAATSNFDPMNKIGEGGFGPVYKGQL------TDGTIIAVKLLSSKS-RQGNREFLNEIGTISCL-QHPNLVKLY 576 (732)
Q Consensus 505 ~~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~ 576 (732)
...++....++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++.++ +||||++++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3455566788999999999999999999973 256899999997643 33456799999999999 799999999
Q ss_pred eeEEeCC-EEEEEEEecCCCchhHHhhcCCCC------------------------------------------------
Q 040398 577 GCCIEGD-QLMLVYEYLENNSLAHALFGGENS------------------------------------------------ 607 (732)
Q Consensus 577 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------ 607 (732)
+++.+.+ ..++||||+++|+|.+++......
T Consensus 93 ~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (359)
T 3vhe_A 93 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKS 172 (359)
T ss_dssp EEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------
T ss_pred eeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccc
Confidence 9998865 489999999999999999754321
Q ss_pred --------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCc-
Q 040398 608 --------------QLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT- 672 (732)
Q Consensus 608 --------------~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~- 672 (732)
...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 249 (359)
T 3vhe_A 173 LSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249 (359)
T ss_dssp -----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTC
T ss_pred cchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccc
Confidence 122899999999999999999999996 99999999999999999999999999976543322
Q ss_pred eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 673 HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 673 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
.......||+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 250 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 23334568899999999999999999999999999999998 99999753
No 81
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-35 Score=311.18 Aligned_cols=202 Identities=29% Similarity=0.469 Sum_probs=171.8
Q ss_pred hCCCcccceecccCceEEEEEEE-----cCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeC--CEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQL-----TDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEG--DQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 585 (732)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788999999999999999984 26899999999876666678899999999999999999999998654 458
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
++||||+++++|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 89 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp EEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred EEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 9999999999999999543 335899999999999999999999986 9999999999999999999999999998
Q ss_pred eCCccCc--eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKT--HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....... .......++..|+|||.+.+..++.++|||||||++|||+||..|+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~ 219 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence 6544322 122234577789999999999999999999999999999999998864
No 82
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3e-35 Score=316.16 Aligned_cols=210 Identities=25% Similarity=0.303 Sum_probs=174.1
Q ss_pred HHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc-----cccchHHHHHHHHHHhcCCCCceeeeeeeEEe
Q 040398 508 QIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK-----SRQGNREFLNEIGTISCLQHPNLVKLYGCCIE 581 (732)
Q Consensus 508 ~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 581 (732)
++....++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 34567788999999999999999999875 7899999998643 23445789999999999999999999999999
Q ss_pred CCEEEEEEEecCCCchhHHhhcCC------------------------------------CCcccCCHHHHHHHHHHHHH
Q 040398 582 GDQLMLVYEYLENNSLAHALFGGE------------------------------------NSQLKLNWSVRQKICLGIAR 625 (732)
Q Consensus 582 ~~~~~lv~e~~~~gsL~~~l~~~~------------------------------------~~~~~l~~~~~~~i~~~i~~ 625 (732)
.+..++||||+++|+|.+++.... .....+++..++.++.||++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 999999999999999999884210 01223467888899999999
Q ss_pred HHHHHHhCCCCceEeCCCCCCCeEEcCCC--CeEEEeeecceeCCccCc---eeeecccCccccccchhccc--CCCCCc
Q 040398 626 GLAFLHEESRFKIVHRDIKATNVLLDRDL--NPKISDFGLAKLDEEEKT---HISTRVAGTIGYMAPEYALW--GYLTYK 698 (732)
Q Consensus 626 aL~yLH~~~~~~iiH~Dlkp~NILl~~~~--~~kL~DfGla~~~~~~~~---~~~~~~~gt~~y~APE~~~~--~~~~~k 698 (732)
||+|||+.+ |+||||||+||+++.++ .+||+|||++........ .......||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999996 99999999999998776 899999999975433211 12234579999999999875 678999
Q ss_pred hhHHHHHHHHHHHHcCCCCCCC
Q 040398 699 ADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 699 ~DvwSlGvll~elltG~~P~~~ 720 (732)
+|||||||++|||++|+.||..
T Consensus 257 ~DiwslG~il~el~~g~~pf~~ 278 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPG 278 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCC
Confidence 9999999999999999999964
No 83
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=9.7e-35 Score=309.22 Aligned_cols=199 Identities=25% Similarity=0.359 Sum_probs=176.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccccc------chHHHHHHHHHHhcCCCCceeeeeeeEEeCCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQ------GNREFLNEIGTISCLQHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 585 (732)
.+.|++.+.||+|+||.||+|+.. +|+.||+|++...... ..+++.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457899999999999999999986 6899999998754221 357799999999999999999999999999999
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC----CeEEEee
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL----NPKISDF 661 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kL~Df 661 (732)
++||||+++++|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccC
Confidence 999999999999999953 346889999999999999999999996 99999999999999887 7999999
Q ss_pred ecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 662 GLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 662 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|++........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 164 g~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 164 GLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp TTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred ccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 99986654322 2345699999999999999999999999999999999999999964
No 84
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-35 Score=318.19 Aligned_cols=202 Identities=27% Similarity=0.379 Sum_probs=174.1
Q ss_pred hCCCcccceecccCceEEEEEEE----cCCeEEEEEEccccc----ccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCC
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQL----TDGTIIAVKLLSSKS----RQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGD 583 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~----~~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 583 (732)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46789999999999999999987 368999999987532 22345677899999999 6999999999999999
Q ss_pred EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 584 QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
..++||||+++++|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ----RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCC
Confidence 99999999999999999853 346899999999999999999999986 99999999999999999999999999
Q ss_pred ceeCCccCceeeecccCccccccchhccc--CCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
++..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 265 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence 98665444433445679999999999985 35789999999999999999999999743
No 85
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=311.38 Aligned_cols=197 Identities=29% Similarity=0.344 Sum_probs=164.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc--cchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR--QGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.++||+|+||.||+|++. +|+.||||++..... ....++..|+..+.++ +||||++++++|.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 457999999999999999999987 799999998765422 2334455666555555 899999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+ +++|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 136 ~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred Eecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 9999 67998887432 346899999999999999999999986 9999999999999999999999999987654
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.
T Consensus 209 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~ 256 (311)
T 3p1a_A 209 TAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPH 256 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCS
T ss_pred cCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 432 2234569999999998876 78999999999999999999976654
No 86
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.3e-35 Score=319.48 Aligned_cols=202 Identities=30% Similarity=0.506 Sum_probs=163.9
Q ss_pred hCCCcccceecccCceEEEEEEEc----CCeEEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT----DGTIIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|++.+.||+|+||.||+|+.. ++..||||+++.. .....+++.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 457889999999999999999865 5678999999764 33445689999999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++|+|.+++... ...+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 99999999999999542 346899999999999999999999986 999999999999999999999999999865
Q ss_pred CccCcee--eecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 668 EEEKTHI--STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~--~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
....... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~ 253 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWE 253 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTT
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCC
Confidence 4432211 112235678999999999999999999999999999998 9999964
No 87
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=314.65 Aligned_cols=200 Identities=24% Similarity=0.348 Sum_probs=175.0
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc--------cchHHHHHHHHHHhcCCCCceeeeeeeEEeC
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR--------QGNREFLNEIGTISCLQHPNLVKLYGCCIEG 582 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 582 (732)
..++|++.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4668999999999999999999875 789999999875421 1234577899999999999999999999999
Q ss_pred CEEEEEEEecCCC-chhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEee
Q 040398 583 DQLMLVYEYLENN-SLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDF 661 (732)
Q Consensus 583 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~Df 661 (732)
+..++||||+.+| +|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 99998843 346899999999999999999999996 999999999999999999999999
Q ss_pred ecceeCCccCceeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 662 GLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 662 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|++........ .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 175 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 175 GSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp TTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred ccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 99987654332 233569999999999988776 7899999999999999999999965
No 88
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.2e-35 Score=311.34 Aligned_cols=190 Identities=26% Similarity=0.374 Sum_probs=151.0
Q ss_pred ceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCC-CCceeeeeeeEEeCCEEEEEEEecCCCch
Q 040398 520 NKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ-HPNLVKLYGCCIEGDQLMLVYEYLENNSL 597 (732)
Q Consensus 520 ~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 597 (732)
+.||+|+||.||+|++. +++.||||++... ....+.+|+++++.+. ||||+++++++.+++..++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 78999999999999986 7899999998643 3466788999999997 99999999999999999999999999999
Q ss_pred hHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC---CeEEEeeecceeCCccCcee
Q 040398 598 AHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL---NPKISDFGLAKLDEEEKTHI 674 (732)
Q Consensus 598 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kL~DfGla~~~~~~~~~~ 674 (732)
.+++.. ...+++..+..++.||++||+|||+++ |+||||||+|||++.++ .+||+|||+++........
T Consensus 94 ~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~- 165 (325)
T 3kn6_A 94 FERIKK----KKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP- 165 (325)
T ss_dssp HHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-
Confidence 999954 346899999999999999999999996 99999999999998765 7999999999865543322
Q ss_pred eecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 675 STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 675 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 166 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 211 (325)
T 3kn6_A 166 LKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211 (325)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred ccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 2345689999999999999999999999999999999999999975
No 89
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.3e-35 Score=321.35 Aligned_cols=203 Identities=27% Similarity=0.454 Sum_probs=174.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+++.+|++++++++||||+++++++.+++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 467888999999999999999987 78999999987543 2334568899999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++|+|.+++.. ....+++..+..++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 193 ~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 193 LVQGGDFLTFLRT---EGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp CCTTCBHHHHHHH---HGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred cCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 9999999999853 2346899999999999999999999996 999999999999999999999999999864432
Q ss_pred Cceee-ecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 671 KTHIS-TRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 671 ~~~~~-~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
..... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||...
T Consensus 267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~ 319 (377)
T 3cbl_A 267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNL 319 (377)
T ss_dssp EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 21111 11235678999999998899999999999999999998 99999753
No 90
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-35 Score=314.49 Aligned_cols=208 Identities=30% Similarity=0.486 Sum_probs=177.6
Q ss_pred HHhCCCcccceecccCceEEEEEEEc------CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLT------DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD 583 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 583 (732)
...++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34678999999999999999999874 34899999997653 334577999999999999999999999999999
Q ss_pred EEEEEEEecCCCchhHHhhcCCCC--------------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCC
Q 040398 584 QLMLVYEYLENNSLAHALFGGENS--------------------QLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDI 643 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dl 643 (732)
..++||||+++++|.+++...... ...+++..++.++.||++||+|||+++ |+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 999999999999999999653221 257899999999999999999999996 999999
Q ss_pred CCCCeEEcCCCCeEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 644 KATNVLLDRDLNPKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 644 kp~NILl~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
||+||++++++.+||+|||++........ .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999875433221 22233568889999999999999999999999999999999 99999653
No 91
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.4e-35 Score=314.38 Aligned_cols=207 Identities=27% Similarity=0.367 Sum_probs=179.6
Q ss_pred cccHHHHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCC-----CCceeeee
Q 040398 503 SFTLKQIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ-----HPNLVKLY 576 (732)
Q Consensus 503 ~~~~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~l~ 576 (732)
.+++++.....++|++.+.||+|+||.||+|++. +++.||||++... ....+.+..|+++++.++ ||||++++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 4455555567889999999999999999999985 7899999998743 333466788999999886 99999999
Q ss_pred eeEEeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC----
Q 040398 577 GCCIEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR---- 652 (732)
Q Consensus 577 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~---- 652 (732)
+++...+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCC
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccccc
Confidence 9999999999999999 899999986432 235889999999999999999999996 999999999999975
Q ss_pred ---------------------CCCeEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHH
Q 040398 653 ---------------------DLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEI 711 (732)
Q Consensus 653 ---------------------~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~el 711 (732)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 7889999999998654322 245789999999999999999999999999999999
Q ss_pred HcCCCCCCC
Q 040398 712 VSGKNNMSY 720 (732)
Q Consensus 712 ltG~~P~~~ 720 (732)
++|+.||..
T Consensus 253 l~g~~pf~~ 261 (360)
T 3llt_A 253 YTGSLLFRT 261 (360)
T ss_dssp HHSSCSCCC
T ss_pred HHCCCCCCC
Confidence 999999964
No 92
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.2e-35 Score=309.21 Aligned_cols=207 Identities=32% Similarity=0.476 Sum_probs=177.8
Q ss_pred HhCCCcccceecccCceEEEEEEE------cCCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQL------TDGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQ 584 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 584 (732)
..++|.+.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 356788999999999999999986 245889999997543 3445778999999999999999999999999999
Q ss_pred EEEEEEecCCCchhHHhhcCCC--------------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCC
Q 040398 585 LMLVYEYLENNSLAHALFGGEN--------------------SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIK 644 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlk 644 (732)
.++||||+++++|.+++..... ....+++..++.++.||++||+|||+++ |+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence 9999999999999999965432 1235899999999999999999999996 9999999
Q ss_pred CCCeEEcCCCCeEEEeeecceeCCccCce-eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 645 ATNVLLDRDLNPKISDFGLAKLDEEEKTH-ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 645 p~NILl~~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
|+||++++++.+||+|||++......... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999866443322 2223457889999999999999999999999999999999 99999754
No 93
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.8e-35 Score=301.94 Aligned_cols=198 Identities=28% Similarity=0.464 Sum_probs=153.0
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 467999999999999999999875 78999999987542 33456789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+ +++|.+.+.. ...+++..++.++.||++||+|||+.+ |+||||||+||++++++.+||+|||++....
T Consensus 92 ~e~~-~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 92 IEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EECC-CEEHHHHHHT----SSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred ehhc-CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceecc
Confidence 9999 6788887743 345899999999999999999999996 9999999999999999999999999997654
Q ss_pred ccCceeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||..
T Consensus 164 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (275)
T 2eue_A 164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC
T ss_pred Ccc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 322 2233568999999999987765 7899999999999999999999975
No 94
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=6.1e-35 Score=305.34 Aligned_cols=202 Identities=28% Similarity=0.408 Sum_probs=171.7
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|++.+.||+|+||.||+|+.. +++.+|+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 457889999999999999999876 68999999987653 3346789999999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE---cCCCCeEEEeeecceeC
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLD 667 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kL~DfGla~~~ 667 (732)
|+++++|.+.+.........+++..++.++.||++||+|||+.+ |+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988654334467899999999999999999999996 9999999999999 44578999999999765
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... ......||+.|+|||++. ..++.++|||||||++|||++|+.||..
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~ 227 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTG 227 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCC
Confidence 4322 223456999999999876 5688999999999999999999999964
No 95
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-34 Score=306.96 Aligned_cols=202 Identities=28% Similarity=0.340 Sum_probs=166.3
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc---cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR---QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
..++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999986 789999999875432 234678999999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++++|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 112 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 184 (309)
T 2h34_A 112 DMRLINGVDLAAMLRR----QGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASAT 184 (309)
T ss_dssp EEECCCCEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC----
T ss_pred EEEecCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccc
Confidence 9999999999999853 346899999999999999999999996 999999999999999999999999998765
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
............|++.|+|||.+.+..++.++||||||+++|||++|+.||..
T Consensus 185 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (309)
T 2h34_A 185 TDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQG 237 (309)
T ss_dssp ------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCS
T ss_pred cccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCC
Confidence 54333333345689999999999999999999999999999999999999964
No 96
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.9e-34 Score=301.01 Aligned_cols=200 Identities=25% Similarity=0.375 Sum_probs=175.7
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
..++|++.+.||+|+||.||+|.+. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3578999999999999999999876 68999999986542 33456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC---eEEEeeecce
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN---PKISDFGLAK 665 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kL~DfGla~ 665 (732)
|||+++++|.+.+.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||.+.
T Consensus 84 ~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 84 FDLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 999999999988843 346899999999999999999999996 999999999999987655 9999999997
Q ss_pred eCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....... .....||+.|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 157 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 209 (284)
T 3kk8_A 157 EVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209 (284)
T ss_dssp ECCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EcccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence 6554322 2345799999999999999999999999999999999999999954
No 97
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-34 Score=305.85 Aligned_cols=200 Identities=28% Similarity=0.388 Sum_probs=169.4
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc--cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR--QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
.++|++.+.||+|+||.||+|++. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367999999999999999999986 689999998865432 23567889999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||+++++|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 82 e~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 82 EYCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp ECCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EeCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 99999999988743 345899999999999999999999996 99999999999999999999999999986653
Q ss_pred cCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 155 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 205 (311)
T 4agu_A 155 PSDY-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPG 205 (311)
T ss_dssp ------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccc-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 3222 234568999999999876 5789999999999999999999999964
No 98
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.7e-35 Score=325.40 Aligned_cols=196 Identities=25% Similarity=0.369 Sum_probs=165.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeC------C
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEG------D 583 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 583 (732)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 568999999999999999999876 7899999998754 334457788999999999999999999999754 4
Q ss_pred EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 584 QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
..++||||+++ +|.+.+. ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEe
Confidence 67999999976 4666662 24889999999999999999999996 99999999999999999999999999
Q ss_pred ceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g 265 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9865432 223446799999999999999999999999999999999999999974
No 99
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=305.36 Aligned_cols=201 Identities=30% Similarity=0.462 Sum_probs=168.7
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-----ccchHHHHHHHHHHhcC---CCCceeeeeeeEEeC
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-----RQGNREFLNEIGTISCL---QHPNLVKLYGCCIEG 582 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~ 582 (732)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ......+.+|+++++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4678999999999999999999975 78999999986432 12235667777777666 499999999999876
Q ss_pred C-----EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeE
Q 040398 583 D-----QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPK 657 (732)
Q Consensus 583 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 657 (732)
. ..++||||++ ++|.+++.... ...+++..++.++.||++||+|||+++ |+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEE
Confidence 5 5899999997 59999885432 234899999999999999999999996 99999999999999999999
Q ss_pred EEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 658 ISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 658 L~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 161 l~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 221 (308)
T 3g33_A 161 LADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 221 (308)
T ss_dssp ECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred EeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999997654322 22346799999999999999999999999999999999999999964
No 100
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.1e-34 Score=300.75 Aligned_cols=199 Identities=31% Similarity=0.504 Sum_probs=164.0
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccc----cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSR----QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|++. ++.||||++..... ...+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457889999999999999999976 89999999875422 2346789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC--------CCCeEEEe
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR--------DLNPKISD 660 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~--------~~~~kL~D 660 (732)
|||+++++|.+++. ...+++..++.++.|+++||+|||+++..+|+||||||+||++++ ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 99999999999883 346899999999999999999999986445899999999999986 67799999
Q ss_pred eecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 661 FGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 661 fGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
||++........ ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 216 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTT
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999975543222 234689999999999999999999999999999999999999975
No 101
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.1e-34 Score=338.05 Aligned_cols=202 Identities=26% Similarity=0.393 Sum_probs=177.4
Q ss_pred HHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEE
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 585 (732)
...++|++.+.||+|+||.||+|+.+ +++.||||+++.. .....+.+..|.+++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34678999999999999999999976 6899999998753 233456788899999988 799999999999999999
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
++||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++++||+|||+++
T Consensus 418 ~lV~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~ 490 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQ----VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 490 (674)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred EEEEeCcCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceee
Confidence 999999999999999953 346899999999999999999999996 9999999999999999999999999998
Q ss_pred eCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 491 ~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~ 544 (674)
T 3pfq_A 491 ENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544 (674)
T ss_dssp ECCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCC
Confidence 5433222 23456899999999999999999999999999999999999999975
No 102
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.2e-34 Score=307.47 Aligned_cols=203 Identities=23% Similarity=0.311 Sum_probs=170.4
Q ss_pred hCCCccc-ceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEEEE
Q 040398 513 TSNFDPM-NKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 513 ~~~f~~~-~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
.+.|++. +.||+|+||.||+|+.. +++.||||++........+.+.+|++++.++ +||||+++++++.+++..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4567775 78999999999999875 7899999999876666678899999999885 7999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC---eEEEeeeccee
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN---PKISDFGLAKL 666 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kL~DfGla~~ 666 (732)
||+++++|.+++.. ...+++..+..++.||++||+|||+++ |+||||||+||+++.++. +||+|||++..
T Consensus 91 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHK----RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999853 346899999999999999999999996 999999999999998776 99999999875
Q ss_pred CCccCc------eeeecccCccccccchhccc-----CCCCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 667 DEEEKT------HISTRVAGTIGYMAPEYALW-----GYLTYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 667 ~~~~~~------~~~~~~~gt~~y~APE~~~~-----~~~~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 230 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence 432111 11223469999999999875 568899999999999999999999997543
No 103
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.2e-34 Score=301.83 Aligned_cols=199 Identities=28% Similarity=0.460 Sum_probs=172.8
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
+.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4568999999999999999999876 67899999986432 2335678999999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.++|+|||++...
T Consensus 87 v~e~~~~~~l~~~l~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK----LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccC
Confidence 9999999999998843 346899999999999999999999986 999999999999999999999999988644
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 209 (279)
T 3fdn_A 160 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred Cccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCC
Confidence 3322 2345689999999999999999999999999999999999999974
No 104
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=316.54 Aligned_cols=206 Identities=29% Similarity=0.433 Sum_probs=177.2
Q ss_pred hCCCcccceecccCceEEEEEEEc--------CCeEEEEEEccccc-ccchHHHHHHHHHHhcC-CCCceeeeeeeEEeC
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT--------DGTIIAVKLLSSKS-RQGNREFLNEIGTISCL-QHPNLVKLYGCCIEG 582 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~--------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 582 (732)
.++|.+.+.||+|+||.||+|++. +++.||||++.... ....+++.+|+++++++ +||||+++++++.++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 467889999999999999999852 34689999987653 33457789999999999 999999999999999
Q ss_pred CEEEEEEEecCCCchhHHhhcCCC------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE
Q 040398 583 DQLMLVYEYLENNSLAHALFGGEN------------SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL 650 (732)
Q Consensus 583 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl 650 (732)
+..++||||+++|+|.+++..... ....+++..++.++.||++||+|||+.+ |+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence 999999999999999999965432 1246899999999999999999999996 9999999999999
Q ss_pred cCCCCeEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 651 DRDLNPKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 651 ~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
++++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999976543222 22233457889999999999999999999999999999999 99999753
No 105
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.6e-35 Score=302.05 Aligned_cols=201 Identities=30% Similarity=0.516 Sum_probs=176.9
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEec
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYL 592 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 592 (732)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 357888999999999999999998889999999876533 3467899999999999999999999999999999999999
Q ss_pred CCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCc
Q 040398 593 ENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT 672 (732)
Q Consensus 593 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~ 672 (732)
++++|.+++... ...+++..+..++.||++||+|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 159 (267)
T 3t9t_A 86 EHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY 159 (267)
T ss_dssp TTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred CCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccc
Confidence 999999998542 346889999999999999999999996 99999999999999999999999999976544322
Q ss_pred eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 673 HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 673 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
.......++..|+|||++.+..++.++||||||+++|+|++ |+.||..
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 208 (267)
T 3t9t_A 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208 (267)
T ss_dssp HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCC
Confidence 22233457789999999998899999999999999999999 8999975
No 106
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.8e-34 Score=303.65 Aligned_cols=196 Identities=30% Similarity=0.472 Sum_probs=164.1
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhc--CCCCceeeeeeeEEeC----CEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISC--LQHPNLVKLYGCCIEG----DQLM 586 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~----~~~~ 586 (732)
.++|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++... ...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 56899999999999999999988 5899999998643 33455666666665 7999999999987653 4689
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHH--------hCCCCceEeCCCCCCCeEEcCCCCeEE
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLH--------EESRFKIVHRDIKATNVLLDRDLNPKI 658 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH--------~~~~~~iiH~Dlkp~NILl~~~~~~kL 658 (732)
+||||+++|+|.+++. ...+++..+.+++.||++||+||| +. +|+||||||+|||++.++.+||
T Consensus 83 lv~e~~~~g~L~~~l~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl 154 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCI 154 (301)
T ss_dssp EEECCCTTCBHHHHHT-----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEE
T ss_pred EehhhccCCCHHHHHh-----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEE
Confidence 9999999999999993 236899999999999999999999 66 4999999999999999999999
Q ss_pred EeeecceeCCccCcee---eecccCccccccchhcccC------CCCCchhHHHHHHHHHHHHcC----------CCCCC
Q 040398 659 SDFGLAKLDEEEKTHI---STRVAGTIGYMAPEYALWG------YLTYKADVYSFGVVALEIVSG----------KNNMS 719 (732)
Q Consensus 659 ~DfGla~~~~~~~~~~---~~~~~gt~~y~APE~~~~~------~~~~k~DvwSlGvll~elltG----------~~P~~ 719 (732)
+|||+++......... .....||+.|+|||++.+. .+++++|||||||++|||+|| +.||.
T Consensus 155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~ 234 (301)
T 3q4u_A 155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234 (301)
T ss_dssp CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence 9999997644333221 2234799999999999876 455799999999999999999 77775
Q ss_pred C
Q 040398 720 Y 720 (732)
Q Consensus 720 ~ 720 (732)
.
T Consensus 235 ~ 235 (301)
T 3q4u_A 235 D 235 (301)
T ss_dssp T
T ss_pred c
Confidence 4
No 107
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-35 Score=318.74 Aligned_cols=205 Identities=30% Similarity=0.402 Sum_probs=174.0
Q ss_pred hCCCcccceecccCceEEEEEEEc------CCeEEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT------DGTIIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 585 (732)
.++|++.+.||+|+||.||+|++. +++.||||++... ......++.+|+.++++++||||+++++++.+.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 457889999999999999999842 5778999998754 334456789999999999999999999999999999
Q ss_pred EEEEEecCCCchhHHhhcCC---CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC---CeEEE
Q 040398 586 MLVYEYLENNSLAHALFGGE---NSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL---NPKIS 659 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kL~ 659 (732)
++||||+++|+|.+++.... .....+++..++.++.||++||+|||+++ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999986532 23346899999999999999999999996 99999999999999554 59999
Q ss_pred eeecceeCCccC-ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 660 DFGLAKLDEEEK-THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 660 DfGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~ 289 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 289 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999997432211 112223467899999999999999999999999999999998 9999975
No 108
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.5e-34 Score=302.22 Aligned_cols=201 Identities=24% Similarity=0.309 Sum_probs=174.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ..+.+.+|+++++++ +|+|++++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 567999999999999999999974 79999999986442 234578899999999 79999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC-----eEEEeeecce
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN-----PKISDFGLAK 665 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~-----~kL~DfGla~ 665 (732)
|+ +++|.+++... ...+++..+..++.||++||+|||+.+ |+||||||+||+++.++. +||+|||++.
T Consensus 87 ~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 87 LL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred ec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 99 99999999543 335899999999999999999999986 999999999999987776 9999999998
Q ss_pred eCCccCce------eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 666 LDEEEKTH------ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 666 ~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 222 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 222 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence 65443221 2234679999999999999999999999999999999999999998643
No 109
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.8e-35 Score=326.11 Aligned_cols=204 Identities=30% Similarity=0.473 Sum_probs=176.8
Q ss_pred HHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 510 RAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 510 ~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
....++|++.+.||+|+||.||+|+++++..||||+++... ...+.|.+|++++++++||||+++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 34467888999999999999999999888999999987643 34678999999999999999999999986 66789999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||+++|+|.+++... ....+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 262 e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp CCCTTCBHHHHHHSH--HHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred eecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 999999999999532 2235788999999999999999999996 99999999999999999999999999986544
Q ss_pred cCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
..........++..|+|||++....++.++|||||||++|||+| |+.||..
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~ 388 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCC
Confidence 32222233456789999999998999999999999999999999 9999974
No 110
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.8e-35 Score=304.19 Aligned_cols=202 Identities=29% Similarity=0.397 Sum_probs=162.5
Q ss_pred hCCCcccceecccCceEEEEEEEc----CCeEEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT----DGTIIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|++.+.||+|+||.||+|++. .+..||+|++... .....+.+.+|+.++++++||||+++++++ .++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence 567889999999999999999874 3567999998764 334456789999999999999999999997 4567889
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++++|.+++... ...+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 93 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECcccccccc
Confidence 99999999999998532 346899999999999999999999986 999999999999999999999999999865
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
............+++.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~ 221 (281)
T 1mp8_A 167 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV 221 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcC
Confidence 5433323333457789999999998899999999999999999997 99999753
No 111
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=300.45 Aligned_cols=202 Identities=27% Similarity=0.447 Sum_probs=156.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+++.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 467899999999999999999975 78999999986532 22347789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++++|.+++... ...+++..++.++.||++||+|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 9999999999998532 346899999999999999999999996 9999999999999999999999999998654
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
..... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 164 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 164 MPHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp -----------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred CCCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 32221 22356899999999999888999999999999999999999999753
No 112
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.3e-34 Score=315.66 Aligned_cols=196 Identities=22% Similarity=0.278 Sum_probs=161.9
Q ss_pred hCCCccc-ceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHh-cCCCCceeeeeeeEEe----CCEE
Q 040398 513 TSNFDPM-NKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTIS-CLQHPNLVKLYGCCIE----GDQL 585 (732)
Q Consensus 513 ~~~f~~~-~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~-~l~H~nIv~l~~~~~~----~~~~ 585 (732)
.++|.+. +.||+|+||.||+|++. +|+.||||++.. ...+.+|++++. ..+||||+++++++.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 4567776 68999999999999986 789999999863 245678888874 4589999999999876 5678
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC---CCCeEEEeee
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR---DLNPKISDFG 662 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kL~DfG 662 (732)
++||||+++|+|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecc
Confidence 9999999999999999643 2346899999999999999999999986 999999999999998 7889999999
Q ss_pred cceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 663 LAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 663 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+++...... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 265 (400)
T 1nxk_A 210 FAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCC
Confidence 998654322 22346789999999999999999999999999999999999999964
No 113
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=9e-35 Score=315.17 Aligned_cols=202 Identities=21% Similarity=0.270 Sum_probs=168.8
Q ss_pred HhCCCcccceecccCceEEEEEEEcC------CeEEEEEEcccccccc-----------hHHHHHHHHHHhcCCCCceee
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLTD------GTIIAVKLLSSKSRQG-----------NREFLNEIGTISCLQHPNLVK 574 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~~------g~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~nIv~ 574 (732)
..++|++.+.||+|+||.||+|++.+ ++.||||++....... ...+.+|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999998764 4789999987543211 123455667788889999999
Q ss_pred eeeeEEeC----CEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE
Q 040398 575 LYGCCIEG----DQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL 650 (732)
Q Consensus 575 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl 650 (732)
+++++... ...++||||+ +++|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~---~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA---NAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH---TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEE
Confidence 99998874 5589999999 9999999854 2346899999999999999999999996 9999999999999
Q ss_pred c--CCCCeEEEeeecceeCCccCcee------eecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 651 D--RDLNPKISDFGLAKLDEEEKTHI------STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 651 ~--~~~~~kL~DfGla~~~~~~~~~~------~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+ .++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~ 263 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWED 263 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 9 88999999999998665432211 1234599999999999999999999999999999999999999984
No 114
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.1e-34 Score=298.02 Aligned_cols=204 Identities=29% Similarity=0.433 Sum_probs=177.1
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3567899999999999999999986 78999999987543 334577899999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||+++++|.+++. ....+++..+..++.||++||+|||+.+ ++||||||+||+++.++.+||+|||.+.....
T Consensus 85 e~~~~~~L~~~l~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 85 EYCSGGELFDRIE----PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp ECCTTEEGGGGSB----TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EecCCCcHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 9999999999883 3346899999999999999999999986 99999999999999999999999999976543
Q ss_pred cCc-eeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 670 EKT-HISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 670 ~~~-~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
... .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 212 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence 222 22334578999999999987664 779999999999999999999997543
No 115
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-34 Score=311.44 Aligned_cols=197 Identities=23% Similarity=0.373 Sum_probs=170.2
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
..++|++.+.||+|+||.||+|+.+ +|+.||+|++...... ..+|++++.++ +||||+++++++.+++..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4567999999999999999999986 7899999998755332 34688888887 7999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC-C---CeEEEeeecce
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD-L---NPKISDFGLAK 665 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~---~~kL~DfGla~ 665 (732)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||+.++ + .+||+|||++.
T Consensus 96 E~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 96 ELMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp CCCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred eCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 99999999998853 346899999999999999999999996 9999999999998543 3 49999999998
Q ss_pred eCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 169 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 222 (342)
T 2qr7_A 169 QLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN 222 (342)
T ss_dssp ECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCS
T ss_pred cCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCC
Confidence 6544322 22346789999999999888889999999999999999999999975
No 116
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=311.98 Aligned_cols=199 Identities=26% Similarity=0.376 Sum_probs=167.1
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEccccc--ccchHHHHHHHHHHhcCCC--CceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQH--PNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lv 588 (732)
.+.|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++| |||+++++++.+++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45788999999999999999998889999999987542 3345778999999999986 9999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|| +.+++|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+|||++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 567899999953 346889999999999999999999996 99999999999997 5789999999998654
Q ss_pred ccCce-eeecccCccccccchhccc-----------CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTH-ISTRVAGTIGYMAPEYALW-----------GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~-~~~~~~gt~~y~APE~~~~-----------~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 43322 2334679999999999865 6789999999999999999999999974
No 117
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.2e-34 Score=319.38 Aligned_cols=199 Identities=28% Similarity=0.388 Sum_probs=168.4
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeC-----CE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEG-----DQ 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 584 (732)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+++.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 568999999999999999999976 6899999998754 233457889999999999999999999998876 57
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
.++||||++ ++|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999996 599999843 346899999999999999999999996 999999999999999999999999999
Q ss_pred eeCCccCc---------------------eeeecccCccccccchhc-ccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 665 KLDEEEKT---------------------HISTRVAGTIGYMAPEYA-LWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 665 ~~~~~~~~---------------------~~~~~~~gt~~y~APE~~-~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
+....... ......+||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 86543321 112456799999999986 55679999999999999999999777664
No 118
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.5e-34 Score=298.88 Aligned_cols=199 Identities=24% Similarity=0.377 Sum_probs=173.0
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc------cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR------QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 585 (732)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356889999999999999999987 789999999875421 2357899999999999999999999999999999
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC----CeEEEee
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL----NPKISDF 661 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~----~~kL~Df 661 (732)
++||||+++++|.+++.. ...+++..+..++.||+.||+|||+.+ ++||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEec
Confidence 999999999999999843 346899999999999999999999986 99999999999998877 7999999
Q ss_pred ecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 662 GLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 662 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|.+........ .....|++.|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 157 g~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 213 (283)
T 3bhy_A 157 GIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence 99986544222 2345689999999999989999999999999999999999999975
No 119
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.1e-34 Score=300.28 Aligned_cols=200 Identities=25% Similarity=0.362 Sum_probs=176.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 457889999999999999999986 68899999986542 23456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++++|.+++.. ...+++..+..++.||++||+|||+.+ ++||||||+||+++.++.+||+|||.+....
T Consensus 94 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 999999999998843 346899999999999999999999996 9999999999999999999999999998654
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 217 (294)
T 2rku_A 167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 217 (294)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 3222 22345689999999999998999999999999999999999999975
No 120
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.1e-34 Score=327.24 Aligned_cols=204 Identities=26% Similarity=0.466 Sum_probs=178.9
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
...+|++.+.||+|+||.||+|+++ ++..||||+++... ...++|.+|++++++++||||+++++++.+++..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 3567888999999999999999987 58999999997543 346789999999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++|+|.+++... ....+++..+..++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 297 ~~~~g~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 297 FMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp CCTTCBHHHHHHHS--CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred ccCCCCHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 99999999999643 2345889999999999999999999996 999999999999999999999999999876543
Q ss_pred CceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 671 KTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 671 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
.........++..|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 3333334456789999999999999999999999999999999 99999753
No 121
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=5.7e-35 Score=305.65 Aligned_cols=204 Identities=26% Similarity=0.464 Sum_probs=180.0
Q ss_pred HHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
...++|++.+.||+|+||.||+|++. +++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 34667889999999999999999987 58999999987543 34577899999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||+++++|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 89 EFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp ECCTTEEHHHHHHHC--CTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EcCCCCcHHHHHHhc--ccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999999643 2345899999999999999999999996 99999999999999999999999999987655
Q ss_pred cCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
..........+|+.|+|||.+.+..++.++||||||+++|+|++ |+.||..
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~ 215 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 44444444557889999999999999999999999999999999 9999975
No 122
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.7e-34 Score=318.77 Aligned_cols=200 Identities=25% Similarity=0.370 Sum_probs=163.4
Q ss_pred HHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc--------cchHHHHHHHHHHhcCCCCceeeeeeeEEe
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR--------QGNREFLNEIGTISCLQHPNLVKLYGCCIE 581 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 581 (732)
...++|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45679999999999999999999876 689999999865321 11235789999999999999999999975
Q ss_pred CCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC---CeEE
Q 040398 582 GDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL---NPKI 658 (732)
Q Consensus 582 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~---~~kL 658 (732)
.+..++||||+++|+|.+++. ....+++..++.++.||++||+|||+++ |+||||||+|||++.++ .+||
T Consensus 211 ~~~~~lv~e~~~~g~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 AEDYYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp SSEEEEEEECCTTCBGGGGTS----SSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEE
T ss_pred cCceEEEEEcCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEE
Confidence 456899999999999999884 3456899999999999999999999996 99999999999997544 5999
Q ss_pred EeeecceeCCccCceeeecccCccccccchhccc---CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 659 SDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALW---GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 659 ~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 284 ~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~ 346 (419)
T 3i6u_A 284 TDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 999999865442 22334679999999999853 5678899999999999999999999975
No 123
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.1e-34 Score=308.84 Aligned_cols=209 Identities=24% Similarity=0.432 Sum_probs=161.8
Q ss_pred HHHhCCCcccceecccCceEEEEEEEcC-Ce---EEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC
Q 040398 510 RAATSNFDPMNKIGEGGFGPVYKGQLTD-GT---IIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD 583 (732)
Q Consensus 510 ~~~~~~f~~~~~LG~G~fg~Vy~a~~~~-g~---~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 583 (732)
....++|++.+.||+|+||.||+|++.. +. .||||++... .....+++.+|++++++++||||+++++++...+
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3446789999999999999999998753 32 7999998764 3344678999999999999999999999998876
Q ss_pred EE------EEEEEecCCCchhHHhhcCC--CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC
Q 040398 584 QL------MLVYEYLENNSLAHALFGGE--NSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN 655 (732)
Q Consensus 584 ~~------~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 655 (732)
.. ++||||+++|+|.+++.... .....+++..++.++.||++||+|||+++ |+||||||+||++++++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCC
Confidence 65 99999999999999885432 23336899999999999999999999996 999999999999999999
Q ss_pred eEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 656 PKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 656 ~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 243 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGI 243 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCcccc
Confidence 99999999976543222 12223456789999999999999999999999999999999 99999753
No 124
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-34 Score=309.69 Aligned_cols=202 Identities=30% Similarity=0.513 Sum_probs=166.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCe----EEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGT----IIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLM 586 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 586 (732)
.++|++.+.||+|+||.||+|++. +++ +||+|.+... .....+++.+|++++++++||||+++++++.++. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 457889999999999999999865 444 3688887643 3345678999999999999999999999998765 77
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+|+||+++|+|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeE
Confidence 899999999999998543 346899999999999999999999996 99999999999999999999999999976
Q ss_pred CCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 667 DEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 667 ~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
...... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 223 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCC
Confidence 543322 22233457889999999999999999999999999999999 99999753
No 125
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.5e-34 Score=305.77 Aligned_cols=210 Identities=21% Similarity=0.341 Sum_probs=177.5
Q ss_pred ccHHHHHHHhCCCccc-ceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCC-CCceeeeeee
Q 040398 504 FTLKQIRAATSNFDPM-NKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQ-HPNLVKLYGC 578 (732)
Q Consensus 504 ~~~~~~~~~~~~f~~~-~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~ 578 (732)
..++......+.|.+. +.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.++++++ ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3445556667778887 88999999999999886 68999999987643 334678899999999994 6999999999
Q ss_pred EEeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC---CCC
Q 040398 579 CIEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR---DLN 655 (732)
Q Consensus 579 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~ 655 (732)
+.+.+..++||||+++|+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++. ++.
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCC
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCc
Confidence 99999999999999999999988432 2356899999999999999999999996 999999999999998 789
Q ss_pred eEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 656 PKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 656 ~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+||+|||++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 173 ~kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 235 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235 (327)
T ss_dssp EEECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 99999999986644322 2345799999999999999999999999999999999999999964
No 126
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.3e-34 Score=304.33 Aligned_cols=199 Identities=31% Similarity=0.512 Sum_probs=166.4
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|.+.+.||+|+||.||+|++. ..+|+|+++.. .....+.+.+|++++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 467889999999999999999865 35899988754 2334577899999999999999999999864 556889999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++++|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 112 WCEGSSLYKHLHV---QETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp CCSSCBHHHHHHT---SCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred cCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999853 3456899999999999999999999996 999999999999999999999999999754331
Q ss_pred -CceeeecccCccccccchhcc---cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 671 -KTHISTRVAGTIGYMAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 671 -~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.........||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 186 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~ 239 (307)
T 3lb7_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH 239 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 122233457999999999986 56788999999999999999999999975
No 127
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-34 Score=309.89 Aligned_cols=208 Identities=30% Similarity=0.460 Sum_probs=175.1
Q ss_pred HhCCCcccceecccCceEEEEEEE------cCCeEEEEEEcccc-cccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCC
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQL------TDGTIIAVKLLSSK-SRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGD 583 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 583 (732)
..++|++.+.||+|+||.||+|++ .+++.||+|++... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 357888999999999999999986 24678999998754 334457899999999999 8999999999999999
Q ss_pred EEEEEEEecCCCchhHHhhcCCCC-------------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCC
Q 040398 584 QLMLVYEYLENNSLAHALFGGENS-------------------QLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIK 644 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlk 644 (732)
..++||||+++|+|.+++...... ...+++..++.++.||++||+|||+.+ |+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence 999999999999999999654321 134799999999999999999999996 9999999
Q ss_pred CCCeEEcCCCCeEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCCC
Q 040398 645 ATNVLLDRDLNPKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVP 722 (732)
Q Consensus 645 p~NILl~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~~ 722 (732)
|+||+++.++.+||+|||++........ .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999975543322 22233457889999999999999999999999999999998 999997543
No 128
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=3.5e-34 Score=306.87 Aligned_cols=200 Identities=25% Similarity=0.366 Sum_probs=176.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
..+|.+.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 467889999999999999999986 6889999998654 233456788999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++++|.+++.. ...+++..++.++.||++||+|||+++ |+||||||+||+++.++.+||+|||++....
T Consensus 120 ~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 999999999998843 346899999999999999999999996 9999999999999999999999999998654
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... ......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 193 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 243 (335)
T 2owb_A 193 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET 243 (335)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred cCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence 3322 22345699999999999998999999999999999999999999975
No 129
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.8e-34 Score=309.14 Aligned_cols=195 Identities=30% Similarity=0.481 Sum_probs=170.5
Q ss_pred CCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
+.|+..+.||+|+||.||+|+.. +|+.||||++.... ....+++.+|++++++++||||+++++++.+++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 45888999999999999999974 79999999987542 223467899999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||++ |+|.+.+.. ....+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 134 e~~~-g~l~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9997 688887742 2346899999999999999999999996 99999999999999999999999999976543
Q ss_pred cCceeeecccCccccccchhcc---cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
. ....||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~ 255 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2 2356999999999985 56789999999999999999999999864
No 130
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.3e-34 Score=298.47 Aligned_cols=201 Identities=35% Similarity=0.547 Sum_probs=175.0
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEec
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYL 592 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 592 (732)
.++|++.+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 46788999999999999999999888899999987543 34578999999999999999999999876 45688999999
Q ss_pred CCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCc
Q 040398 593 ENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT 672 (732)
Q Consensus 593 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~ 672 (732)
++++|.+++... ....+++..+..++.||++||+|||+.+ |+||||||+||++++++.+||+|||.+........
T Consensus 90 ~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 164 (279)
T 1qpc_A 90 ENGSLVDFLKTP--SGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY 164 (279)
T ss_dssp TTCBHHHHTTSH--HHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred CCCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCccc
Confidence 999999998431 1236899999999999999999999996 99999999999999999999999999987655443
Q ss_pred eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 673 HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 673 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 33334557889999999998899999999999999999999 9999964
No 131
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-34 Score=323.49 Aligned_cols=194 Identities=25% Similarity=0.384 Sum_probs=154.2
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeC-----CE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEG-----DQ 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~ 584 (732)
.++|++.+.||+|+||.||+|++. +++.||||++... .....+++.+|++++++++||||+++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999876 7899999998653 233457789999999999999999999998543 57
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
.++||||+ +++|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 132 ~~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla 203 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLA 203 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecc-ccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccc
Confidence 89999998 5689998843 346899999999999999999999996 999999999999999999999999999
Q ss_pred eeCCccCc--------------------------eeeecccCccccccchhc-ccCCCCCchhHHHHHHHHHHHHcC
Q 040398 665 KLDEEEKT--------------------------HISTRVAGTIGYMAPEYA-LWGYLTYKADVYSFGVVALEIVSG 714 (732)
Q Consensus 665 ~~~~~~~~--------------------------~~~~~~~gt~~y~APE~~-~~~~~~~k~DvwSlGvll~elltG 714 (732)
+....... ......+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 86542211 122345789999999976 466799999999999999999994
No 132
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.6e-34 Score=313.77 Aligned_cols=201 Identities=27% Similarity=0.337 Sum_probs=167.7
Q ss_pred HHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeC------
Q 040398 510 RAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEG------ 582 (732)
Q Consensus 510 ~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------ 582 (732)
....++|++.+.||+|+||.||+|++. +|+.||+|++...... ..+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS----CCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999875 7999999988654322 24699999999999999999998543
Q ss_pred --------------------------------CEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHH
Q 040398 583 --------------------------------DQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFL 630 (732)
Q Consensus 583 --------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yL 630 (732)
...++||||++ ++|.+.+.........+++..++.++.||++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34889999998 588887754334456789999999999999999999
Q ss_pred HhCCCCceEeCCCCCCCeEEc-CCCCeEEEeeecceeCCccCceeeecccCccccccchhcccC-CCCCchhHHHHHHHH
Q 040398 631 HEESRFKIVHRDIKATNVLLD-RDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVA 708 (732)
Q Consensus 631 H~~~~~~iiH~Dlkp~NILl~-~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll 708 (732)
|+.+ |+||||||+|||++ +++.+||+|||+++....... .....||+.|+|||++.+. .++.++||||+||++
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 9986 99999999999998 678999999999986644332 2345689999999998865 589999999999999
Q ss_pred HHHHcCCCCCCC
Q 040398 709 LEIVSGKNNMSY 720 (732)
Q Consensus 709 ~elltG~~P~~~ 720 (732)
|||++|+.||..
T Consensus 233 ~ell~g~~pf~~ 244 (383)
T 3eb0_A 233 GELILGKPLFSG 244 (383)
T ss_dssp HHHHHSSCSSCC
T ss_pred HHHHhCCCCCCC
Confidence 999999999975
No 133
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.4e-34 Score=298.50 Aligned_cols=198 Identities=26% Similarity=0.425 Sum_probs=175.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467899999999999999999986 68899999986432 23356789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++++|.+++.. ...+++..+..++.||++||+|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 999999999998843 346899999999999999999999986 9999999999999999999999999987554
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence 322 2245689999999999999999999999999999999999999974
No 134
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=308.86 Aligned_cols=199 Identities=25% Similarity=0.427 Sum_probs=164.8
Q ss_pred CCCcccceecccCceEEEEEEEc-CCeEEEEEEccccccc-chHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQ-GNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
++|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+|++++++++||||+++++++.+++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999999986 7899999998754322 223456799999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccC
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEK 671 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~ 671 (732)
++ |+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 5898888542 346899999999999999999999996 9999999999999999999999999997554322
Q ss_pred ceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 672 THISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 672 ~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 203 (324)
T 3mtl_A 155 K-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG 203 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred c-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2 2233568999999999876 5689999999999999999999999965
No 135
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.7e-34 Score=317.63 Aligned_cols=199 Identities=32% Similarity=0.501 Sum_probs=172.6
Q ss_pred HhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC-EEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD-QLMLVYE 590 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lv~e 590 (732)
..++|++.+.||+|+||.||+|++. |+.||||+++... ..+.|.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 4567888999999999999999886 7899999997543 4578999999999999999999999988765 7999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++|+|.+++... ....+++..+..++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp CCTTCBHHHHHHHH--CTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 99999999999642 2234789999999999999999999996 999999999999999999999999999854332
Q ss_pred CceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCCC
Q 040398 671 KTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVP 722 (732)
Q Consensus 671 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~~ 722 (732)
. ....++..|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 343 ~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~ 391 (450)
T 1k9a_A 343 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred c----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 1 12357889999999999999999999999999999998 999997644
No 136
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.4e-34 Score=308.68 Aligned_cols=202 Identities=30% Similarity=0.497 Sum_probs=169.4
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeE----EEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTI----IAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLM 586 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 586 (732)
.++|++.+.||+|+||.||+|++. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 457889999999999999999875 4543 7888775432 334456788999999999999999999886 46688
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+||||+++|+|.+++... ...+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccc
Confidence 999999999999998542 346888999999999999999999996 99999999999999999999999999986
Q ss_pred CCccCce-eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 667 DEEEKTH-ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 667 ~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
....... ......|+..|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 221 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTS
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcccc
Confidence 6443322 2334567889999999999999999999999999999999 99999753
No 137
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.3e-34 Score=314.72 Aligned_cols=199 Identities=25% Similarity=0.367 Sum_probs=167.8
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccc--cccchHHHHHHHHHHhcCC--CCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQ--HPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lv 588 (732)
...|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 3468999999999999999999888999999998654 2334577899999999996 59999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|| +.+++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++...
T Consensus 135 ~E-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 5688999998543 36788999999999999999999986 99999999999996 5789999999998654
Q ss_pred ccCce-eeecccCccccccchhccc-----------CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTH-ISTRVAGTIGYMAPEYALW-----------GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~-~~~~~~gt~~y~APE~~~~-----------~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 43222 2334679999999999865 4688999999999999999999999975
No 138
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.6e-34 Score=309.64 Aligned_cols=205 Identities=24% Similarity=0.401 Sum_probs=177.3
Q ss_pred HHHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc--------cchHHHHHHHHHHhcC-CCCceeeee
Q 040398 507 KQIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR--------QGNREFLNEIGTISCL-QHPNLVKLY 576 (732)
Q Consensus 507 ~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l-~H~nIv~l~ 576 (732)
.......++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.+++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 334455678999999999999999999986 799999999865431 1235678999999999 799999999
Q ss_pred eeEEeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCe
Q 040398 577 GCCIEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNP 656 (732)
Q Consensus 577 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~ 656 (732)
+++...+..++||||+++++|.+++.. ...+++..+..++.||+.||+|||+.| |+||||||+||+++.++.+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCE
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCE
Confidence 999999999999999999999999843 346899999999999999999999996 9999999999999999999
Q ss_pred EEEeeecceeCCccCceeeecccCccccccchhccc------CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 657 KISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALW------GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 657 kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~------~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 240 kl~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 240 RLSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp EECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 9999999986654322 234679999999999863 3588899999999999999999999964
No 139
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.8e-34 Score=323.87 Aligned_cols=200 Identities=29% Similarity=0.446 Sum_probs=172.6
Q ss_pred HHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc-------------cchHHHHHHHHHHhcCCCCceeeee
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR-------------QGNREFLNEIGTISCLQHPNLVKLY 576 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~ 576 (732)
...++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||++++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 35678999999999999999999986 689999999875421 2356789999999999999999999
Q ss_pred eeEEeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC--
Q 040398 577 GCCIEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL-- 654 (732)
Q Consensus 577 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-- 654 (732)
+++.+++..++||||+++|+|.+.+.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~ 185 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIIN----RHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSL 185 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCC
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCC
Confidence 999999999999999999999998843 346899999999999999999999996 99999999999998876
Q ss_pred -CeEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 655 -NPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 655 -~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.+||+|||++........ .....||+.|+|||++. ..++.++||||+||++|+|++|+.||..
T Consensus 186 ~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~ 249 (504)
T 3q5i_A 186 LNIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGG 249 (504)
T ss_dssp SSEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 699999999987654322 23457999999999877 4689999999999999999999999975
No 140
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.4e-34 Score=299.12 Aligned_cols=200 Identities=26% Similarity=0.389 Sum_probs=172.2
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 587 (732)
..++|++.+.||+|+||.||+|+.. +++.||+|++... ......++.+|+..+.++ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4568999999999999999999986 7999999998754 233456788999999999 99999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC--------------
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD-------------- 653 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-------------- 653 (732)
||||+++++|.+++.........+++..++.++.||++||+|||+++ |+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999654333356899999999999999999999996 9999999999999844
Q ss_pred -----CCeEEEeeecceeCCccCceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 654 -----LNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 654 -----~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
..+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|+|++|..|+.
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 232 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCS
T ss_pred ccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCc
Confidence 479999999998665432 23589999999998866 66689999999999999999997764
No 141
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.4e-34 Score=305.92 Aligned_cols=206 Identities=26% Similarity=0.445 Sum_probs=175.6
Q ss_pred hCCCcccceecccCceEEEEEEEc--------CCeEEEEEEccccc-ccchHHHHHHHHHHhcC-CCCceeeeeeeEEeC
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT--------DGTIIAVKLLSSKS-RQGNREFLNEIGTISCL-QHPNLVKLYGCCIEG 582 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~--------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~ 582 (732)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 568889999999999999999863 46789999997653 33456789999999999 899999999999999
Q ss_pred CEEEEEEEecCCCchhHHhhcCCC------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE
Q 040398 583 DQLMLVYEYLENNSLAHALFGGEN------------SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL 650 (732)
Q Consensus 583 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl 650 (732)
+..++||||+++|+|.+++..... ....+++..++.++.||++||+|||+.+ |+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence 999999999999999999965432 1235899999999999999999999996 9999999999999
Q ss_pred cCCCCeEEEeeecceeCCccCce-eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 651 DRDLNPKISDFGLAKLDEEEKTH-ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 651 ~~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
+.++.+||+|||++......... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 99999999999999866543322 2223457889999999998899999999999999999999 99999753
No 142
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.4e-34 Score=303.01 Aligned_cols=200 Identities=31% Similarity=0.471 Sum_probs=171.5
Q ss_pred CCCcccceecccCceEEEEEEE-----cCCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeC--CEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQL-----TDGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEG--DQL 585 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~-----~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~ 585 (732)
..|++.+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578899999999999999983 368999999987543 34457889999999999999999999999876 668
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
++||||+++++|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 101 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPK---NKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp EEEEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEEeCCCCcHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccc
Confidence 999999999999999843 2345899999999999999999999996 9999999999999999999999999998
Q ss_pred eCCccCc--eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 666 LDEEEKT--HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 666 ~~~~~~~--~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
....... .......||..|+|||++.+..++.++|||||||++|||+||+.|+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 7654433 22334568888999999999999999999999999999999998864
No 143
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=317.12 Aligned_cols=202 Identities=24% Similarity=0.334 Sum_probs=173.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC--EEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD--QLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lv 588 (732)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 457889999999999999999986 68999999987543 334577889999999999999999999998765 78999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE----cCCCCeEEEeeecc
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL----DRDLNPKISDFGLA 664 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~kL~DfGla 664 (732)
|||+++|+|.+++.... ....+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPS-NAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGG-GTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 99999999999985432 2234899999999999999999999996 9999999999999 77778999999999
Q ss_pred eeCCccCceeeecccCccccccchhccc--------CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEKTHISTRVAGTIGYMAPEYALW--------GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~~~~~~~~~gt~~y~APE~~~~--------~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 225 (396)
T 4eut_A 164 RELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (396)
T ss_dssp EECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred eEccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 87654332 234579999999999865 5678899999999999999999999964
No 144
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.7e-34 Score=303.24 Aligned_cols=199 Identities=24% Similarity=0.387 Sum_probs=173.1
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
..++|++.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3567889999999999999999986 799999999986655555778999999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE---cCCCCeEEEeeecceeC
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLD 667 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kL~DfGla~~~ 667 (732)
|+++++|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||++ ++++.++|+|||++...
T Consensus 87 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 87 LVSGGELFDRILE----RGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred cCCCccHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 9999999998843 346899999999999999999999996 9999999999999 77889999999998754
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 209 (304)
T 2jam_A 160 QNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209 (304)
T ss_dssp CCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 3321 2234689999999999999999999999999999999999999964
No 145
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.8e-34 Score=304.01 Aligned_cols=207 Identities=28% Similarity=0.478 Sum_probs=177.8
Q ss_pred hCCCcccceecccCceEEEEEEE------cCCeEEEEEEcccccc-cchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQL------TDGTIIAVKLLSSKSR-QGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQ 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 584 (732)
.++|++.+.||+|+||.||+|++ .+++.||+|++..... ...+.+.+|+++++++ +||||+++++++.+++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 56788999999999999999985 2578999999875533 3457789999999999 99999999999999999
Q ss_pred EEEEEEecCCCchhHHhhcCCC--------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE
Q 040398 585 LMLVYEYLENNSLAHALFGGEN--------------SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL 650 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~--------------~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl 650 (732)
.++||||+++|+|.+++..... ....+++..++.++.||++||+|||+.+ |+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence 9999999999999999865432 1235899999999999999999999996 9999999999999
Q ss_pred cCCCCeEEEeeecceeCCccCce-eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCCC
Q 040398 651 DRDLNPKISDFGLAKLDEEEKTH-ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYVP 722 (732)
Q Consensus 651 ~~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~~ 722 (732)
++++.+||+|||++......... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||....
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 252 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP 252 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence 99999999999999865543322 2233457889999999999999999999999999999999 999997543
No 146
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.2e-34 Score=305.57 Aligned_cols=205 Identities=25% Similarity=0.358 Sum_probs=173.4
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEe----CCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIE----GDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 587 (732)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 467899999999999999999974 789999999876666667789999999999999999999999873 347899
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++++|.+++.........+++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||.+...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 99999999999998654444567899999999999999999999996 999999999999999999999999998754
Q ss_pred CccCce--------eeecccCccccccchhcccCC---CCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTH--------ISTRVAGTIGYMAPEYALWGY---LTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~--------~~~~~~gt~~y~APE~~~~~~---~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
...... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 248 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhh
Confidence 321111 011235799999999987543 68899999999999999999999953
No 147
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.7e-34 Score=312.48 Aligned_cols=198 Identities=23% Similarity=0.454 Sum_probs=174.3
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 457999999999999999999986 7899999998765 33445778999999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC-CCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE-SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
|+++++|.+++.. ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++.....
T Consensus 112 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 112 HMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp CCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred CCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999843 34688999999999999999999985 5 99999999999999999999999999864322
Q ss_pred cCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
. ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 185 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 185 S---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp H---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred c---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 1 22345799999999999999999999999999999999999999964
No 148
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.1e-34 Score=307.78 Aligned_cols=200 Identities=26% Similarity=0.363 Sum_probs=164.1
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc--cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR--QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
..++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4668999999999999999999876 789999999975432 2345678999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEc-----CCCCeEEEeeec
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD-----RDLNPKISDFGL 663 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~-----~~~~~kL~DfGl 663 (732)
|||+++ +|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++ +++.+||+|||+
T Consensus 112 ~e~~~~-~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EECCSE-EHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EecCCC-CHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999974 99998843 335899999999999999999999996 99999999999994 445599999999
Q ss_pred ceeCCccCceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+........ ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 184 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 240 (329)
T 3gbz_A 184 ARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG 240 (329)
T ss_dssp HHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 975443222 22345689999999999874 589999999999999999999999964
No 149
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.2e-33 Score=298.07 Aligned_cols=199 Identities=32% Similarity=0.484 Sum_probs=176.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.+.|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356889999999999999999875 78999999987543 3446789999999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++++|.+++. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 101 ~~~~~~L~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 101 YLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp CCTTEEHHHHHT-----TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred eCCCCcHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999984 246899999999999999999999996 999999999999999999999999999765443
Q ss_pred CceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 671 KTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 671 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 173 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 221 (303)
T 3a7i_A 173 QI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221 (303)
T ss_dssp BC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCC
Confidence 22 22345689999999999999999999999999999999999999974
No 150
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-34 Score=311.25 Aligned_cols=195 Identities=26% Similarity=0.408 Sum_probs=165.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC------
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD------ 583 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 583 (732)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+++.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 568999999999999999999985 7999999998653 2334567899999999999999999999998753
Q ss_pred EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 584 QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
..++||||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeec
Confidence 469999999 7899998853 35889999999999999999999996 99999999999999999999999999
Q ss_pred ceeCCccCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 9865432 234578999999999887 6899999999999999999999999974
No 151
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.5e-34 Score=302.71 Aligned_cols=195 Identities=28% Similarity=0.422 Sum_probs=170.1
Q ss_pred hCCCcccceecccCceEEEEEEEc-CC-------eEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DG-------TIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQ 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g-------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 584 (732)
.++|++.+.||+|+||.||+|+.. ++ +.||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 457889999999999999999865 33 5799999987666677889999999999999999999999999999
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC--------e
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN--------P 656 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~--------~ 656 (732)
.++||||+++++|.+++... ...+++..+..++.||++||+|||+++ |+||||||+|||++.++. +
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCccccccccee
Confidence 99999999999999999542 334899999999999999999999996 999999999999998887 9
Q ss_pred EEEeeecceeCCccCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCC
Q 040398 657 KISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNM 718 (732)
Q Consensus 657 kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~ 718 (732)
||+|||++...... ....||+.|+|||++.+ ..++.++|||||||++|||++|..|+
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~ 218 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKP 218 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 99999998654332 12357889999999987 67899999999999999999965443
No 152
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.9e-34 Score=306.32 Aligned_cols=202 Identities=30% Similarity=0.434 Sum_probs=176.6
Q ss_pred hCCCcccceecccCceEEEEEEE-----cCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEe--CCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQL-----TDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIE--GDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~ 585 (732)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 45788999999999999999984 3689999999987766667789999999999999999999999874 5678
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
++||||+++++|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 102 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred EEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccce
Confidence 9999999999999998532 335899999999999999999999986 9999999999999999999999999998
Q ss_pred eCCccCce--eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTH--ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~--~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
........ ......||..|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 232 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCS 232 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 76543322 22334588889999999998999999999999999999999999853
No 153
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.2e-34 Score=305.66 Aligned_cols=201 Identities=27% Similarity=0.429 Sum_probs=170.2
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc--cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR--QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 567899999999999999999986 689999998865432 33466889999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||+++++|.+++. ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 104 EFVDHTILDDLEL----FPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp ECCSEEHHHHHHH----STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred ecCCcchHHHHHh----hccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 9999999988763 2345899999999999999999999996 99999999999999999999999999976543
Q ss_pred cCceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
... ......||+.|+|||++.+. .++.++|||||||++|+|++|+.||...
T Consensus 177 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 177 PGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred Ccc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 222 22345689999999998875 7899999999999999999999999753
No 154
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.7e-34 Score=322.05 Aligned_cols=202 Identities=32% Similarity=0.520 Sum_probs=169.7
Q ss_pred HhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
..++|++.+.||+|+||.||+|+++++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 456788899999999999999999888889999997643 335789999999999999999999999866 678999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccC
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEK 671 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~ 671 (732)
+++|+|.+++... ....+++..+..++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 260 ~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 260 MSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CTTCBHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hcCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 9999999999431 2235889999999999999999999996 9999999999999999999999999998654433
Q ss_pred ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 672 THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 672 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
........++..|+|||.+.+..++.++|||||||++|||+| |+.||..
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~ 384 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 384 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCC
Confidence 222333457789999999999999999999999999999999 9999964
No 155
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.5e-35 Score=317.85 Aligned_cols=200 Identities=15% Similarity=0.171 Sum_probs=163.4
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHH---HHHhcCCCCceeeee-------ee
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEI---GTISCLQHPNLVKLY-------GC 578 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~ 578 (732)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+ +++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 457888999999999999999974 7999999998743 334457789999 555666899999998 66
Q ss_pred EEeCC-----------------EEEEEEEecCCCchhHHhhcCC---CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCce
Q 040398 579 CIEGD-----------------QLMLVYEYLENNSLAHALFGGE---NSQLKLNWSVRQKICLGIARGLAFLHEESRFKI 638 (732)
Q Consensus 579 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~---~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~i 638 (732)
+.+++ ..++||||+ +|+|.+++.... .....+++..++.|+.||++||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 65543 278999999 679999985421 11234556888999999999999999996 9
Q ss_pred EeCCCCCCCeEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhcccC-----------CCCCchhHHHHHHH
Q 040398 639 VHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWG-----------YLTYKADVYSFGVV 707 (732)
Q Consensus 639 iH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----------~~~~k~DvwSlGvl 707 (732)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985433 2234567 999999999887 89999999999999
Q ss_pred HHHHHcCCCCCCCC
Q 040398 708 ALEIVSGKNNMSYV 721 (732)
Q Consensus 708 l~elltG~~P~~~~ 721 (732)
+|||++|+.||...
T Consensus 303 l~elltg~~Pf~~~ 316 (377)
T 3byv_A 303 IYWIWCADLPITKD 316 (377)
T ss_dssp HHHHHHSSCCC---
T ss_pred HHHHHHCCCCCccc
Confidence 99999999999753
No 156
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.6e-34 Score=321.68 Aligned_cols=199 Identities=29% Similarity=0.461 Sum_probs=169.8
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
..+.|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3557999999999999999999986 78999999987542 33467889999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC---CCeEEEeeecce
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD---LNPKISDFGLAK 665 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kL~DfGla~ 665 (732)
|||+++|+|.+.+.. ...+++..+..++.||++||+|||+.+ |+||||||+|||++.. +.+||+|||++.
T Consensus 115 ~e~~~~g~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 115 MECYKGGELFDEIIH----RMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 999999999998843 346899999999999999999999996 9999999999999764 459999999998
Q ss_pred eCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
...... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||..
T Consensus 188 ~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~ 239 (494)
T 3lij_A 188 VFENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGG 239 (494)
T ss_dssp ECBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ECCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 664432 223457999999999876 5689999999999999999999999974
No 157
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.1e-34 Score=305.58 Aligned_cols=201 Identities=30% Similarity=0.424 Sum_probs=171.0
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeC-------
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEG------- 582 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------- 582 (732)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 467999999999999999999985 78999999986543 23356788999999999999999999999873
Q ss_pred -CEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEee
Q 040398 583 -DQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDF 661 (732)
Q Consensus 583 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~Df 661 (732)
+..++||||+++ +|.+.+... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Df 168 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADF 168 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred CceEEEEEeccCC-CHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccc
Confidence 468999999975 777766432 345899999999999999999999996 999999999999999999999999
Q ss_pred ecceeCCccC---ceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 662 GLAKLDEEEK---THISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 662 Gla~~~~~~~---~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 169 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 231 (351)
T 3mi9_A 169 GLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 231 (351)
T ss_dssp TTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred hhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence 9998654322 122234578999999998876 4689999999999999999999999974
No 158
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3e-34 Score=308.66 Aligned_cols=200 Identities=23% Similarity=0.258 Sum_probs=165.5
Q ss_pred hCCCcccceecccCceEEEEEEEc----CCeEEEEEEccccccc-----------chHHHHHHHHHHhcCCCCceeeeee
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT----DGTIIAVKLLSSKSRQ-----------GNREFLNEIGTISCLQHPNLVKLYG 577 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~ 577 (732)
.++|++.+.||+|+||.||+|+.. ++..+|+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467889999999999999999975 5788999998754321 1234678889999999999999999
Q ss_pred eEEe----CCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC
Q 040398 578 CCIE----GDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD 653 (732)
Q Consensus 578 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~ 653 (732)
++.. ....++||||+ +++|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQ----NGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBG----GGBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccC
Confidence 9988 78899999999 9999999843 237899999999999999999999996 9999999999999988
Q ss_pred C--CeEEEeeecceeCCccCce------eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 654 L--NPKISDFGLAKLDEEEKTH------ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 654 ~--~~kL~DfGla~~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 262 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ 262 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 7 9999999999866433211 11345799999999999999999999999999999999999999964
No 159
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.4e-34 Score=309.38 Aligned_cols=208 Identities=26% Similarity=0.364 Sum_probs=171.4
Q ss_pred ccHHHHHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEccccccc-----------chHHHHHHHHHHhcCCCCce
Q 040398 504 FTLKQIRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQ-----------GNREFLNEIGTISCLQHPNL 572 (732)
Q Consensus 504 ~~~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nI 572 (732)
..++++....++|++.+.||+|+||.||+|+..+|+.||||++...... ..+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 3467888889999999999999999999999888999999988643221 13778999999999999999
Q ss_pred eeeeeeEEeC-----CEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCC
Q 040398 573 VKLYGCCIEG-----DQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATN 647 (732)
Q Consensus 573 v~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~N 647 (732)
+++++++... ...++||||++ |+|.+.+.. ....+++..+..++.||+.||+|||+.+ |+||||||+|
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~N 164 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD---QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGN 164 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHH
Confidence 9999998653 36899999997 588887753 3346899999999999999999999996 9999999999
Q ss_pred eEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 648 VLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 648 ILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|+++.++.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 165 Il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 236 (362)
T 3pg1_A 165 ILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRG 236 (362)
T ss_dssp EEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred EEEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCC
Confidence 999999999999999997543322 2234568999999999876 6789999999999999999999999975
No 160
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=5.7e-34 Score=301.53 Aligned_cols=204 Identities=26% Similarity=0.416 Sum_probs=166.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.. +|+.||+|++... .....+++.+|++++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 457999999999999999999875 7899999998753 233456789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++++|.+++.........+++..++.++.||++||+|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 9999999999998654334556899999999999999999999996 9999999999999999999999999987654
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 238 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 3222 22235689999999999999999999999999999999999999964
No 161
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.9e-34 Score=296.53 Aligned_cols=199 Identities=33% Similarity=0.568 Sum_probs=169.2
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccc-------hHHHHHHHHHHhcCCCCceeeeeeeEEeCCE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQG-------NREFLNEIGTISCLQHPNLVKLYGCCIEGDQ 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~-------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 584 (732)
.++|++.+.||+|+||.||+|++. +++.||+|++....... .+++.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 467889999999999999999985 78999999986543221 267899999999999999999999987665
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC-----eEEE
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN-----PKIS 659 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~-----~kL~ 659 (732)
++||||+++++|.+.+.. ....+++..++.++.|++.||+|||+.+ .+|+||||||+||+++.++. +||+
T Consensus 97 -~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC---TTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred -eEEEEecCCCCHHHHHhc---ccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 689999999999988854 2346899999999999999999999883 23999999999999988776 9999
Q ss_pred eeecceeCCccCceeeecccCccccccchhcc--cCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 660 DFGLAKLDEEEKTHISTRVAGTIGYMAPEYAL--WGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 660 DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~--~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
|||+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 172 Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 231 (287)
T 4f0f_A 172 DFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY 231 (287)
T ss_dssp CCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 9999874333 223457999999999983 456789999999999999999999999753
No 162
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-33 Score=295.54 Aligned_cols=201 Identities=29% Similarity=0.474 Sum_probs=172.5
Q ss_pred hCCCcccc-eecccCceEEEEEEEc---CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMN-KIGEGGFGPVYKGQLT---DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~-~LG~G~fg~Vy~a~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|.+.+ .||+|+||.||+|++. +++.||+|++.... ....+++.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 34566666 8999999999999853 57889999997643 34567799999999999999999999999 5567899
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++++|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEECCTTEEHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHh---CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999999843 3446899999999999999999999996 999999999999999999999999999876
Q ss_pred CccCcee--eecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 668 EEEKTHI--STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~--~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
....... .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 216 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 5433322 222346889999999998899999999999999999998 9999975
No 163
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.6e-34 Score=321.76 Aligned_cols=199 Identities=27% Similarity=0.425 Sum_probs=172.5
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
..++|++.+.||+|+||.||+|+.. +++.||||++... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3567999999999999999999986 7899999998643 233467889999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEc---CCCCeEEEeeecce
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD---RDLNPKISDFGLAK 665 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~---~~~~~kL~DfGla~ 665 (732)
|||+++++|.+.+.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++.
T Consensus 100 ~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 100 GELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp ECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 999999999998843 346899999999999999999999996 99999999999995 45679999999997
Q ss_pred eCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..
T Consensus 173 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 224 (486)
T 3mwu_A 173 CFQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224 (486)
T ss_dssp TBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ECCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 554322 2234579999999998875 589999999999999999999999964
No 164
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.3e-34 Score=299.62 Aligned_cols=208 Identities=27% Similarity=0.449 Sum_probs=174.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEe--CCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIE--GDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~l 587 (732)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467899999999999999999986 78999999987542 3445678999999999999999999998865 568999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCC--CCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEES--RFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~--~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
||||+++++|.+++.........+++..++.++.||+.||+|||+.+ ..+|+||||||+||+++.++.+||+|||.+.
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999654444456899999999999999999999874 1229999999999999999999999999987
Q ss_pred eCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
....... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 219 (279)
T 2w5a_A 165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF 219 (279)
T ss_dssp HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCccc
Confidence 6543222 122346899999999999889999999999999999999999999753
No 165
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=7e-34 Score=303.37 Aligned_cols=203 Identities=31% Similarity=0.489 Sum_probs=170.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEE--EEEEcccc-cccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTII--AVKLLSSK-SRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~v--AvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|++.+.||+|+||.||+|+.. ++..+ |+|++... .....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 357888999999999999999875 66654 99988753 333456789999999999 89999999999999999999
Q ss_pred EEEecCCCchhHHhhcCC------------CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC
Q 040398 588 VYEYLENNSLAHALFGGE------------NSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN 655 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 655 (732)
||||+++++|.+++.... .....+++..++.++.||++||+|||+.+ |+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCe
Confidence 999999999999996543 23357899999999999999999999996 999999999999999999
Q ss_pred eEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 656 PKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 656 ~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
+||+|||+++...... ......+++.|+|||++.+..++.++|||||||++|||+| |+.||..
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 244 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG 244 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCC
Confidence 9999999987433221 1122356889999999998889999999999999999998 9999964
No 166
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=3.7e-34 Score=322.46 Aligned_cols=199 Identities=29% Similarity=0.447 Sum_probs=174.8
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
..++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3567999999999999999999986 79999999986542 3456789999999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE---cCCCCeEEEeeecc
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLA 664 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kL~DfGla 664 (732)
||||+.+|+|.+.+.. ...+++..+..++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 9999999999998853 346899999999999999999999996 9999999999999 46788999999999
Q ss_pred eeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
........ .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..
T Consensus 177 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~ 229 (484)
T 3nyv_A 177 THFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNG 229 (484)
T ss_dssp HHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred EEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCC
Confidence 76544322 233569999999998876 689999999999999999999999975
No 167
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1e-33 Score=300.95 Aligned_cols=197 Identities=32% Similarity=0.475 Sum_probs=171.0
Q ss_pred CcccceecccCceEEEEEEEc-----CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeC--CEEEE
Q 040398 516 FDPMNKIGEGGFGPVYKGQLT-----DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEG--DQLML 587 (732)
Q Consensus 516 f~~~~~LG~G~fg~Vy~a~~~-----~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~l 587 (732)
|++.+.||+|+||.||++++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999988642 68999999997653 34456789999999999999999999999984 67899
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++++|.+++.. ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 113 v~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccc
Confidence 9999999999999843 24899999999999999999999996 999999999999999999999999999876
Q ss_pred CccCce--eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTH--ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~--~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
...... ......+|..|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~ 239 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence 543322 22345688899999999998999999999999999999999999864
No 168
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=8.5e-34 Score=308.28 Aligned_cols=196 Identities=24% Similarity=0.365 Sum_probs=162.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC------
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD------ 583 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------ 583 (732)
.++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999876 7899999998753 2334567889999999999999999999998765
Q ss_pred EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 584 QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
..++||||+++ +|.+.+. ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeec
Confidence 78999999975 7888773 24789999999999999999999996 99999999999999999999999999
Q ss_pred ceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 174 a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 228 (371)
T 2xrw_A 174 ARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 97654321 22345799999999999999999999999999999999999999964
No 169
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.5e-34 Score=299.88 Aligned_cols=202 Identities=25% Similarity=0.395 Sum_probs=159.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc-c-chHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR-Q-GNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~-~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... . ..+.+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 567899999999999999999975 799999999875422 2 2334455566688899999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC-CCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE-SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
||++ |+|.+++.........+++..++.++.||+.||+|||++ + |+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 488887754333456789999999999999999999997 6 9999999999999999999999999997654
Q ss_pred ccCceeeecccCccccccchhc----ccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYA----LWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~----~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 162 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (290)
T 3fme_A 162 DDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 215 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred cccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence 4322 2234689999999996 566789999999999999999999999974
No 170
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=4.4e-34 Score=298.01 Aligned_cols=201 Identities=29% Similarity=0.421 Sum_probs=169.1
Q ss_pred hCCCcccceecccCceEEEEEEEcC----CeEEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTD----GTIIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~----g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
.++|++.+.||+|+||.||+|++.+ +..||+|++... .....+.+.+|++++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 5678899999999999999998642 346999998765 33456789999999999999999999999765 45689
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||||+++++|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 90 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 90 IMELYPYGELGHYLER---NKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp EEECCTTCBHHHHHHH---HTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred EEecCCCCCHHHHHHh---ccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccc
Confidence 9999999999999853 2345899999999999999999999996 999999999999999999999999999765
Q ss_pred CccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
............+++.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 164 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred ccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 5433333334557889999999998899999999999999999998 9999964
No 171
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-34 Score=306.90 Aligned_cols=203 Identities=29% Similarity=0.417 Sum_probs=166.7
Q ss_pred HHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccccc-----chHHHHHHHHHHhcCCCCceeeeeeeEEeCC
Q 040398 510 RAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQ-----GNREFLNEIGTISCLQHPNLVKLYGCCIEGD 583 (732)
Q Consensus 510 ~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 583 (732)
....++|++.+.||+|+||.||+|++. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 345678999999999999999999976 6899999998753221 2346889999999999999999999999999
Q ss_pred EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 584 QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
..++||||+++ +|.+++.. ....+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKD---NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGL 158 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTT---CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGG
T ss_pred ceEEEEEcCCC-CHHHHHHh---cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEeccc
Confidence 99999999986 88888843 2346788899999999999999999996 99999999999999999999999999
Q ss_pred ceeCCccCceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++....... ......||+.|+|||++.+. .++.++|||||||++|||++|..||..
T Consensus 159 a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~ 215 (346)
T 1ua2_A 159 AKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPG 215 (346)
T ss_dssp GSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 976543322 22345789999999998764 588999999999999999999999864
No 172
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.8e-34 Score=297.95 Aligned_cols=199 Identities=35% Similarity=0.563 Sum_probs=160.0
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|++.+.||+|+||.||+|+.. ..+|+|+++... ....+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 567889999999999999999865 359999987543 33457799999999999999999999964 5567899999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++++|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 100 WCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp CCCEEEHHHHHTT---C---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred ecCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999843 3356899999999999999999999996 999999999999999999999999998754332
Q ss_pred C-ceeeecccCccccccchhcc---cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 671 K-THISTRVAGTIGYMAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 671 ~-~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
. ........||+.|+|||.+. +..++.++||||||+++|||++|+.||..
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 227 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSN 227 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccc
Confidence 1 22223456999999999986 56788899999999999999999999975
No 173
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6.3e-34 Score=314.40 Aligned_cols=197 Identities=28% Similarity=0.361 Sum_probs=163.9
Q ss_pred CCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeC------CEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEG------DQLM 586 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~ 586 (732)
.+|++.+.||+|+||.||+|++. +|+.||||++..... ...+|++++++++||||+++++++... .+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35888999999999999999986 689999998865322 234699999999999999999988642 2367
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC-CCeEEEeeecce
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD-LNPKISDFGLAK 665 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-~~~kL~DfGla~ 665 (732)
+||||+++ ++.+.+.........+++..++.++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999976 666665433334557899999999999999999999986 9999999999999965 568999999998
Q ss_pred eCCccCceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 206 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~ 259 (420)
T 1j1b_A 206 QLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259 (420)
T ss_dssp ECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred hcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 6544322 2345789999999998765 789999999999999999999999974
No 174
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.2e-34 Score=303.13 Aligned_cols=213 Identities=27% Similarity=0.408 Sum_probs=179.2
Q ss_pred HHHHHHHhCCCcccceecccCceEEEEEEE------cCCeEEEEEEccccc-ccchHHHHHHHHHHhcC-CCCceeeeee
Q 040398 506 LKQIRAATSNFDPMNKIGEGGFGPVYKGQL------TDGTIIAVKLLSSKS-RQGNREFLNEIGTISCL-QHPNLVKLYG 577 (732)
Q Consensus 506 ~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~ 577 (732)
..+.....++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++.++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 344445678899999999999999999974 257899999987643 33456789999999999 7999999999
Q ss_pred eEEeCC-EEEEEEEecCCCchhHHhhcCCCC------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCC
Q 040398 578 CCIEGD-QLMLVYEYLENNSLAHALFGGENS------------QLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIK 644 (732)
Q Consensus 578 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlk 644 (732)
++...+ ..++||||+++++|.+++...... ...+++..+..++.||++||+|||+.+ |+|||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dik 175 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLA 175 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCS
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCc
Confidence 988754 589999999999999999654322 223789999999999999999999996 9999999
Q ss_pred CCCeEEcCCCCeEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 645 ATNVLLDRDLNPKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 645 p~NILl~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
|+||+++.++.+||+|||++........ .......||+.|+|||++.+..++.++|||||||++|||+| |+.||...
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 254 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 254 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCccc
Confidence 9999999999999999999976544322 22234557889999999999999999999999999999998 99999753
No 175
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2.2e-33 Score=295.09 Aligned_cols=200 Identities=26% Similarity=0.389 Sum_probs=174.6
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---------ccchHHHHHHHHHHhcCC-CCceeeeeeeEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---------RQGNREFLNEIGTISCLQ-HPNLVKLYGCCI 580 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~ 580 (732)
..++|++.+.||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4678999999999999999999986 78999999986542 122456789999999995 999999999999
Q ss_pred eCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEe
Q 040398 581 EGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISD 660 (732)
Q Consensus 581 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~D 660 (732)
+++..++||||+++++|.+++.. ...+++..++.++.||+.||+|||+.+ ++||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~d 167 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTD 167 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECC
T ss_pred cCCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEec
Confidence 99999999999999999999843 346899999999999999999999996 99999999999999999999999
Q ss_pred eecceeCCccCceeeecccCccccccchhcc------cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 661 FGLAKLDEEEKTHISTRVAGTIGYMAPEYAL------WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 661 fGla~~~~~~~~~~~~~~~gt~~y~APE~~~------~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
||++........ .....|++.|+|||++. ...++.++||||||+++|+|++|+.||..
T Consensus 168 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 231 (298)
T 1phk_A 168 FGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231 (298)
T ss_dssp CTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcC
Confidence 999986554322 23456899999999885 45688999999999999999999999964
No 176
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.2e-34 Score=294.92 Aligned_cols=199 Identities=26% Similarity=0.442 Sum_probs=167.3
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 568899999999999999999986 79999999986532 23456789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++++|.+++.. ...+++..+..++.||++||+|||+.+ ++||||||+||+++.++.++|+|||++....
T Consensus 90 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 90 MEYVSGGELFDYICK----HGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EECCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccC
Confidence 999999999999843 345889999999999999999999996 9999999999999999999999999987654
Q ss_pred ccCceeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... ......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..
T Consensus 163 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 213 (276)
T 2h6d_A 163 DGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213 (276)
T ss_dssp C---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 422 1223568999999999987765 6899999999999999999999974
No 177
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.1e-34 Score=306.82 Aligned_cols=204 Identities=25% Similarity=0.408 Sum_probs=171.3
Q ss_pred HHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHH-HhcCCCCceeeeeeeEEeCCEEEE
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGT-ISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
...++|++.+.||+|+||.||+|+.. +|+.||||++.... .....++..|..+ ++.++||||+++++++.+++..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 34678999999999999999999975 79999999987643 2334455566555 788899999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC-CCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE-SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
||||+++ +|.+++.........+++..++.++.||++||+|||++ + |+||||||+|||++.++.+||+|||++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999975 99888854333456789999999999999999999986 5 99999999999999999999999999875
Q ss_pred CCccCceeeecccCccccccchhcc----cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 667 DEEEKTHISTRVAGTIGYMAPEYAL----WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 667 ~~~~~~~~~~~~~gt~~y~APE~~~----~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
..... ......||+.|+|||++. ...++.++|||||||++|||+||+.||..
T Consensus 204 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~ 259 (340)
T 3an0_A 204 LVDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS 259 (340)
T ss_dssp HSCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred ccccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 54321 122346999999999964 34788999999999999999999999974
No 178
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=294.65 Aligned_cols=201 Identities=30% Similarity=0.398 Sum_probs=170.7
Q ss_pred CCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEecC
Q 040398 515 NFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYLE 593 (732)
Q Consensus 515 ~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 593 (732)
+|.....||+|+||.||+|++. +++.||+|++........+.+.+|+++++.++||||+++++++.+.+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 4455568999999999999975 789999999987666666789999999999999999999999999999999999999
Q ss_pred CCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC-CCCeEEEeeecceeCCccCc
Q 040398 594 NNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR-DLNPKISDFGLAKLDEEEKT 672 (732)
Q Consensus 594 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~-~~~~kL~DfGla~~~~~~~~ 672 (732)
+++|.+++.... ....+++..+..++.||++||+|||+.+ ++||||||+||+++. ++.+||+|||.+........
T Consensus 103 ~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 103 GGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp EEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999999986432 2345678999999999999999999986 999999999999988 89999999999976543222
Q ss_pred eeeecccCccccccchhcccCC--CCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 673 HISTRVAGTIGYMAPEYALWGY--LTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 673 ~~~~~~~gt~~y~APE~~~~~~--~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||..
T Consensus 179 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 179 -CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred -cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 223456899999999987653 78999999999999999999999964
No 179
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.8e-33 Score=300.34 Aligned_cols=192 Identities=21% Similarity=0.366 Sum_probs=169.7
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCC-CCceeeeeeeEEe--CCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ-HPNLVKLYGCCIE--GDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|+.. +++.||+|++... ..+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 467999999999999999999875 7899999998743 3467899999999997 9999999999998 6678999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC-CeEEEeeecceeC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL-NPKISDFGLAKLD 667 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~-~~kL~DfGla~~~ 667 (732)
|||+++++|.+++. .+++..+..++.||++||+|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 112 ~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 99999999999873 3788999999999999999999996 99999999999999776 8999999999866
Q ss_pred CccCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
..... .....|+..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 182 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~ 232 (330)
T 3nsz_A 182 HPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232 (330)
T ss_dssp CTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 54332 233568999999999877 678999999999999999999999995
No 180
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=297.77 Aligned_cols=200 Identities=32% Similarity=0.476 Sum_probs=171.6
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
..+.|++.+.||+|+||.||+|+.. +|+.||+|++.... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4568999999999999999999986 68999999987543 35778999999999999999999999999999999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++++|.+++.. ....+++..+..++.||+.||+|||+.+ ++||||||+||+++.++.+||+|||.+......
T Consensus 105 ~~~~~~L~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 105 YCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp CCTTEEHHHHHHH---HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred cCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 9999999998842 2346899999999999999999999986 999999999999999999999999999765432
Q ss_pred CceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 671 KTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 671 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.. ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 179 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 227 (314)
T 3com_A 179 MA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227 (314)
T ss_dssp BS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 22 22345689999999999998999999999999999999999999975
No 181
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.9e-34 Score=306.82 Aligned_cols=211 Identities=27% Similarity=0.391 Sum_probs=178.4
Q ss_pred HHHHHHhCCCcccceecccCceEEEEEEEc------CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeE
Q 040398 507 KQIRAATSNFDPMNKIGEGGFGPVYKGQLT------DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCC 579 (732)
Q Consensus 507 ~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~------~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 579 (732)
+++....++|++.+.||+|+||.||+|++. +++.||+|++.... .....++.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 444556788999999999999999999754 36889999987543 23456789999999999999999999999
Q ss_pred EeCCEEEEEEEecCCCchhHHhhcCC------CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC
Q 040398 580 IEGDQLMLVYEYLENNSLAHALFGGE------NSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD 653 (732)
Q Consensus 580 ~~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~ 653 (732)
.+.+..++||||+++|+|.+++.... .....+++..+.+++.||++||+|||+++ |+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCC
Confidence 99999999999999999999985421 11245789999999999999999999996 9999999999999999
Q ss_pred CCeEEEeeecceeCCccCce-eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 654 LNPKISDFGLAKLDEEEKTH-ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 654 ~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
+.+||+|||++......... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 243 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG 243 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence 99999999998754332221 1223456889999999999999999999999999999999 8999975
No 182
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-33 Score=301.08 Aligned_cols=200 Identities=26% Similarity=0.369 Sum_probs=168.1
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc--------cchHHHHHHHHHHhcCCCCceeeeeeeEEeC
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR--------QGNREFLNEIGTISCLQHPNLVKLYGCCIEG 582 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 582 (732)
..++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3567999999999999999999876 689999999865321 1234578999999999999999999998765
Q ss_pred CEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC---eEEE
Q 040398 583 DQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN---PKIS 659 (732)
Q Consensus 583 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kL~ 659 (732)
+ .++||||+++++|.+++. ....+++..++.++.||++||+|||+++ |+||||||+||+++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVV----GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHS----TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEc
Confidence 5 899999999999999884 3446899999999999999999999996 999999999999987654 9999
Q ss_pred eeecceeCCccCceeeecccCccccccchhcc---cCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 660 DFGLAKLDEEEKTHISTRVAGTIGYMAPEYAL---WGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 660 DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
|||++....... ......||+.|+|||++. ...++.++|||||||++|+|++|+.||...
T Consensus 160 Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (322)
T 2ycf_A 160 DFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222 (322)
T ss_dssp CCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred cCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 999998664422 122356899999999874 467889999999999999999999999753
No 183
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-33 Score=298.82 Aligned_cols=200 Identities=29% Similarity=0.438 Sum_probs=162.9
Q ss_pred HHHHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcC--CCCceeeeeeeEEeC--
Q 040398 507 KQIRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCL--QHPNLVKLYGCCIEG-- 582 (732)
Q Consensus 507 ~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~-- 582 (732)
.......++|++.+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++... +||||+++++++...
T Consensus 30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred ccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 333455678999999999999999999886 8999999986432 33445555555554 899999999999987
Q ss_pred --CEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCC-----CCceEeCCCCCCCeEEcCCCC
Q 040398 583 --DQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEES-----RFKIVHRDIKATNVLLDRDLN 655 (732)
Q Consensus 583 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~-----~~~iiH~Dlkp~NILl~~~~~ 655 (732)
...++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+.+ ..+|+||||||+|||++.++.
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCceEEEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 789999999999999999943 35899999999999999999999871 113999999999999999999
Q ss_pred eEEEeeecceeCCccCcee---eecccCccccccchhcccCCCCCc------hhHHHHHHHHHHHHcCC
Q 040398 656 PKISDFGLAKLDEEEKTHI---STRVAGTIGYMAPEYALWGYLTYK------ADVYSFGVVALEIVSGK 715 (732)
Q Consensus 656 ~kL~DfGla~~~~~~~~~~---~~~~~gt~~y~APE~~~~~~~~~k------~DvwSlGvll~elltG~ 715 (732)
+||+|||++.......... .....||+.|+|||++.+...+.+ +|||||||++|||+||.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~ 249 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRC 249 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTB
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhcc
Confidence 9999999997654433221 123579999999999987766655 99999999999999993
No 184
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.9e-34 Score=300.69 Aligned_cols=243 Identities=27% Similarity=0.386 Sum_probs=212.5
Q ss_pred CCCCEEEcccCcCcc--ccCcccccc-ccceEeccc-ccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCE
Q 040398 17 PYLETVDFAYNYLHG--SIPREWASM-QLKYISVFA-NRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLET 92 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~~--~~p~~~~~~-~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 92 (732)
.+++.|+|++|.+++ .+|..+..+ +|++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 578899999999998 888888888 799999994 8898889999999999999999999998888989999999999
Q ss_pred EeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCC-CCCEEEcccCCCcCcCCccccCccCCCeeeccCcC
Q 040398 93 LRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWT-QLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 93 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 171 (732)
|+|++|+|++.+|..+..+++|+.|++++|++++.+|..+..++ +|+.|+|++|++++.+|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 99999999988899999999999999999999888999998888 899999999999988899988887 9999999999
Q ss_pred CCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeE
Q 040398 172 GPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSL 251 (732)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~L 251 (732)
+.+..+..|..+++|+.|+|++|++++.+|. +..+++|+.|+|++|++++.+|.. +.++++|+.|
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~--------------l~~l~~L~~L 273 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG--------------LTQLKFLHSL 273 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG--------------GGGCTTCCEE
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH--------------HhcCcCCCEE
Confidence 9888888899999999999999999876666 778899999999999999888865 6677889999
Q ss_pred EccCCcCcCCCCCCccccCCCCcc
Q 040398 252 DLSYNNFTWQSPEQPACREKPNLN 275 (732)
Q Consensus 252 dLs~N~l~~~~p~~~~~~~~~~l~ 275 (732)
+|++|+|+|.+|.......+..+.
T Consensus 274 ~Ls~N~l~~~ip~~~~l~~L~~l~ 297 (313)
T 1ogq_A 274 NVSFNNLCGEIPQGGNLQRFDVSA 297 (313)
T ss_dssp ECCSSEEEEECCCSTTGGGSCGGG
T ss_pred ECcCCcccccCCCCccccccChHH
Confidence 999999998888764444444443
No 185
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.2e-34 Score=308.65 Aligned_cols=195 Identities=28% Similarity=0.419 Sum_probs=154.6
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEeC------C
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEG------D 583 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~ 583 (732)
.++|++.+.||+|+||.||+|.+. +|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 468999999999999999999875 7999999998754 233456788999999999999999999998754 5
Q ss_pred EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 584 QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
..++|+|++ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 6899988842 46899999999999999999999986 99999999999999999999999999
Q ss_pred ceeCCccCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9764432 234578999999999887 6789999999999999999999999964
No 186
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.7e-33 Score=295.34 Aligned_cols=202 Identities=24% Similarity=0.314 Sum_probs=167.9
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeE-EeCCEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCC-IEGDQLMLVY 589 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lv~ 589 (732)
..++|++.+.||+|+||.||+|++. +++.||||++..... .+.+.+|+++++.++|++++..+..+ .+.+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 4678999999999999999999974 789999998654432 24578899999999988877666555 6678899999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE---cCCCCeEEEeeeccee
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKL 666 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kL~DfGla~~ 666 (732)
||+ +++|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+ ++++.+||+|||++..
T Consensus 85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~ 157 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Ecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCcccee
Confidence 999 99999998532 345899999999999999999999996 9999999999999 7889999999999986
Q ss_pred CCccCc------eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 667 DEEEKT------HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 667 ~~~~~~------~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 4hgt_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred ccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence 544322 11234579999999999999999999999999999999999999998644
No 187
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.5e-33 Score=305.51 Aligned_cols=199 Identities=26% Similarity=0.389 Sum_probs=171.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeC-----CEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEG-----DQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 585 (732)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 568999999999999999999876 78999999987543 33447789999999999999999999998765 368
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
++||||++ ++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++.
T Consensus 106 ~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceE
Confidence 99999997 599998843 35899999999999999999999996 9999999999999999999999999998
Q ss_pred eCCccCcee--eecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHI--STRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~--~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
......... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 234 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCC
Confidence 765433221 234579999999998764 4589999999999999999999999964
No 188
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.4e-33 Score=303.63 Aligned_cols=202 Identities=22% Similarity=0.352 Sum_probs=174.9
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccc-----------------hHHHHHHHHHHhcCCCCceeee
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQG-----------------NREFLNEIGTISCLQHPNLVKL 575 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~nIv~l 575 (732)
.++|++.+.||+|+||.||+|+. +|+.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 56899999999999999999999 89999999987542211 1789999999999999999999
Q ss_pred eeeEEeCCEEEEEEEecCCCchhHHhhc----CCCCcccCCHHHHHHHHHHHHHHHHHHHh-CCCCceEeCCCCCCCeEE
Q 040398 576 YGCCIEGDQLMLVYEYLENNSLAHALFG----GENSQLKLNWSVRQKICLGIARGLAFLHE-ESRFKIVHRDIKATNVLL 650 (732)
Q Consensus 576 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~----~~~~~~~l~~~~~~~i~~~i~~aL~yLH~-~~~~~iiH~Dlkp~NILl 650 (732)
++++.+++..++||||+++++|.+++.. .......+++..++.++.||+.||+|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999998321 11224678999999999999999999998 75 9999999999999
Q ss_pred cCCCCeEEEeeecceeCCccCceeeecccCccccccchhcccC-CCCC-chhHHHHHHHHHHHHcCCCCCCCC
Q 040398 651 DRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWG-YLTY-KADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 651 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~-k~DvwSlGvll~elltG~~P~~~~ 721 (732)
+.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++|||||||++|||++|+.||...
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 255 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999865432 23346799999999999877 5665 999999999999999999999753
No 189
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1e-33 Score=295.16 Aligned_cols=197 Identities=25% Similarity=0.449 Sum_probs=172.0
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEe---------
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIE--------- 581 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--------- 581 (732)
...+|++.+.||+|+||.||+|++. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567999999999999999999986 79999999987543 346789999999999999999998865
Q ss_pred -------CCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCC
Q 040398 582 -------GDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDL 654 (732)
Q Consensus 582 -------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~ 654 (732)
....++||||+++++|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR--RGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHG--GGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCC
Confidence 44589999999999999999542 2346899999999999999999999996 99999999999999999
Q ss_pred CeEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 655 NPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 655 ~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|||++|..|+.
T Consensus 160 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~ 222 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF 222 (284)
T ss_dssp EEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred CEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence 999999999986654322 233568999999999999999999999999999999999998874
No 190
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.2e-33 Score=292.38 Aligned_cols=198 Identities=25% Similarity=0.385 Sum_probs=170.2
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeC--CEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEG--DQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 588 (732)
.++|++.+.||+|+||.||+|++. ++.||||++.... ....+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 457889999999999999999986 8899999987643 34456799999999999999999999999887 788999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++... ....+++..++.++.||++||+|||+.+ ..++||||||+||++++++.++|+|||.+....
T Consensus 88 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEG--TNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSC--SSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 9999999999999643 2235899999999999999999999873 249999999999999999999999998865322
Q ss_pred ccCceeeecccCccccccchhcccCCCCC---chhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTY---KADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~---k~DvwSlGvll~elltG~~P~~~ 720 (732)
. ....||+.|+|||.+.+...+. ++|||||||++|||++|+.||..
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 213 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTT
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 2 1245899999999998765444 79999999999999999999975
No 191
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.6e-34 Score=303.69 Aligned_cols=202 Identities=30% Similarity=0.513 Sum_probs=165.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeE----EEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTI----IAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLM 586 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~----vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 586 (732)
.++|++.+.||+|+||.||+|++. +++. ||+|.+... .....+++.+|++++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 467999999999999999999875 4543 577776543 3445678999999999999999999999998765 78
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+|+||+++|+|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 899999999999998543 346899999999999999999999996 99999999999999999999999999976
Q ss_pred CCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 667 DEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 667 ~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
...... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~ 223 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 543322 12223456789999999999999999999999999999999 99999753
No 192
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.3e-33 Score=292.77 Aligned_cols=197 Identities=31% Similarity=0.450 Sum_probs=169.1
Q ss_pred CCcccceecccCceEEEEEEEc-CCeEEEEEEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEe----CCEEEE
Q 040398 515 NFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIE----GDQLML 587 (732)
Q Consensus 515 ~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~l 587 (732)
.|.+.+.||+|+||.||+|.+. ++..||+|++... .....+.+.+|++++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 4677889999999999999876 6889999998754 33445778999999999999999999999876 456899
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEc-CCCCeEEEeeeccee
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD-RDLNPKISDFGLAKL 666 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kL~DfGla~~ 666 (732)
||||+++++|.+++.. ...+++..++.++.||++||+|||+.+ .+|+||||||+||+++ +++.+||+|||++..
T Consensus 107 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEecCCCCHHHHHHH----ccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999943 346889999999999999999999873 2499999999999998 788999999999975
Q ss_pred CCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 667 DEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 667 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
...... ....||+.|+|||++. +.++.++|||||||++|+|++|+.||..
T Consensus 182 ~~~~~~---~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~ 231 (290)
T 1t4h_A 182 KRASFA---KAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CCTTSB---EESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccc---ccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCC
Confidence 443322 2356999999999876 4689999999999999999999999975
No 193
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3e-33 Score=293.66 Aligned_cols=201 Identities=25% Similarity=0.324 Sum_probs=171.2
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeE-EeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCC-IEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lv~e 590 (732)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... .+++.+|+++++.++|++++..+.++ .+.+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 578999999999999999999974 799999999865432 34688999999999988877655554 66788899999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE---cCCCCeEEEeeecceeC
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLD 667 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kL~DfGla~~~ 667 (732)
|+ +++|.+++... ...+++..+..++.||++||+|||+++ |+||||||+||++ ++++.+||+|||++...
T Consensus 86 ~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 86 LL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred ec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 99 89999998532 346899999999999999999999996 9999999999999 48889999999999865
Q ss_pred CccCce------eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 668 EEEKTH------ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 668 ~~~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcC
Confidence 443221 1234579999999999999999999999999999999999999998643
No 194
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6e-34 Score=299.91 Aligned_cols=206 Identities=28% Similarity=0.430 Sum_probs=158.3
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+++.+|++++++++||||+++++++..++..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 4678999999999999999999865 78999999987543 334567889999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcC----CCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 590 EYLENNSLAHALFGG----ENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 590 e~~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
||+++++|.+++... ......+++..+..++.||++||+|||+.+ ++||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 999999999988531 223456899999999999999999999996 9999999999999999999999999987
Q ss_pred eCCccCc----eeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKT----HISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~----~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 5443211 11233568999999999876 5689999999999999999999999975
No 195
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.8e-34 Score=300.11 Aligned_cols=201 Identities=27% Similarity=0.484 Sum_probs=170.1
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
.+.|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 568899999999999999999986 6899999999876666678899999999999999999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccC
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEK 671 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~ 671 (732)
+++++|.+++.. ....+++..+..++.||++||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (302)
T 2j7t_A 98 CPGGAVDAIMLE---LDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171 (302)
T ss_dssp CTTEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH
T ss_pred CCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccccc
Confidence 999999998843 2345899999999999999999999996 9999999999999999999999999875321111
Q ss_pred ceeeecccCccccccchhcc-----cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 672 THISTRVAGTIGYMAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 672 ~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.......||+.|+|||++. +..++.++||||||+++|+|++|+.||..
T Consensus 172 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 224 (302)
T 2j7t_A 172 -QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 224 (302)
T ss_dssp -HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred -cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCcc
Confidence 1122356899999999883 56789999999999999999999999975
No 196
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=299.02 Aligned_cols=199 Identities=31% Similarity=0.522 Sum_probs=164.3
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEec
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYL 592 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 592 (732)
.++|++.+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++. +..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 356888999999999999999886 788999998643 34578899999999999999999999876 3478999999
Q ss_pred CCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC-eEEEeeecceeCCccC
Q 040398 593 ENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN-PKISDFGLAKLDEEEK 671 (732)
Q Consensus 593 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~-~kL~DfGla~~~~~~~ 671 (732)
++++|.+++.... ....+++..++.++.||++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH- 159 (307)
T ss_dssp TTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred CCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-
Confidence 9999999996542 2235788999999999999999999932225999999999999998887 799999998754332
Q ss_pred ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 672 THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 672 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 206 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence 12345899999999999999999999999999999999999999743
No 197
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.3e-33 Score=295.06 Aligned_cols=201 Identities=29% Similarity=0.460 Sum_probs=170.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
.++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 357899999999999999999986 78999999987543 233577889999999999999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||++ ++|.+++.... ...+++..+..++.||++||+|||+++ ++||||||+||+++.++.+||+|||.+.....
T Consensus 82 e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp ECCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred Eccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 9997 59999885432 235789999999999999999999996 99999999999999999999999999875433
Q ss_pred cCceeeecccCccccccchhcccCC-CCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 670 EKTHISTRVAGTIGYMAPEYALWGY-LTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 670 ~~~~~~~~~~gt~~y~APE~~~~~~-~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... ......||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||..
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 206 (299)
T 2r3i_A 156 PVR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPG 206 (299)
T ss_dssp CSB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred Ccc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 221 122346899999999988764 79999999999999999999999975
No 198
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.3e-34 Score=304.98 Aligned_cols=207 Identities=29% Similarity=0.447 Sum_probs=175.7
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CC-----eEEEEEEccccc-ccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCC
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DG-----TIIAVKLLSSKS-RQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGD 583 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g-----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 583 (732)
..++|++.+.||+|+||.||+|+.. ++ +.||+|++.... ....+.+.+|+++++++ +||||+++++++.+++
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 4578899999999999999999874 23 479999987653 33456789999999999 8999999999999999
Q ss_pred EEEEEEEecCCCchhHHhhcCCC----------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC
Q 040398 584 QLMLVYEYLENNSLAHALFGGEN----------SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD 653 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~ 653 (732)
..++||||+++|+|.+++..... ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCC
Confidence 99999999999999999854211 1345799999999999999999999996 9999999999999999
Q ss_pred CCeEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 654 LNPKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 654 ~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
+.+||+|||++........ .......+|+.|+|||.+.+..++.++|||||||++|||+| |..||...
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 270 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGI 270 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCccc
Confidence 9999999999975433222 22233457889999999999999999999999999999999 99999753
No 199
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.1e-33 Score=299.87 Aligned_cols=210 Identities=27% Similarity=0.416 Sum_probs=166.4
Q ss_pred HHHHhCCCcccceecccCceEEEEEEEc----CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeC
Q 040398 509 IRAATSNFDPMNKIGEGGFGPVYKGQLT----DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEG 582 (732)
Q Consensus 509 ~~~~~~~f~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 582 (732)
+....++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3345678889999999999999999764 35689999987542 33456789999999999999999999999876
Q ss_pred CE-----EEEEEEecCCCchhHHhhcCC--CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC
Q 040398 583 DQ-----LMLVYEYLENNSLAHALFGGE--NSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN 655 (732)
Q Consensus 583 ~~-----~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~ 655 (732)
+. .++||||+++++|.+++.... .....+++..++.++.||++||+|||+.+ |+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCc
Confidence 53 599999999999999885432 34456899999999999999999999986 999999999999999999
Q ss_pred eEEEeeecceeCCccCc-eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 656 PKISDFGLAKLDEEEKT-HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 656 ~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
+||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 253 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGV 253 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred EEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccC
Confidence 99999999975543221 12223457889999999999999999999999999999999 88898753
No 200
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.7e-33 Score=309.00 Aligned_cols=197 Identities=22% Similarity=0.331 Sum_probs=170.3
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcC------CCCceeeeeeeEEeCCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCL------QHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~ 585 (732)
..+|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999876 6899999998754 23345677788877776 577999999999999999
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC--eEEEeeec
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN--PKISDFGL 663 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~--~kL~DfGl 663 (732)
++||||++ ++|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++. +||+|||+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred EEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeeccc
Confidence 99999996 68999885432 234899999999999999999999986 999999999999999987 99999999
Q ss_pred ceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 249 a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~ 301 (429)
T 3kvw_A 249 SCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPG 301 (429)
T ss_dssp CEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence 9765432 2235799999999999999999999999999999999999999965
No 201
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.2e-34 Score=325.33 Aligned_cols=203 Identities=32% Similarity=0.516 Sum_probs=175.2
Q ss_pred HHhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEE
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 590 (732)
...++|++.+.||+|+||.||+|++.++..||||+++... ...++|.+|++++++++||||+++++++.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3456788899999999999999999888889999987643 335789999999999999999999999866 67899999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCcc
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEE 670 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~ 670 (732)
|+++|+|.+++... ....+++..+..++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++.....
T Consensus 342 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 342 YMSKGSLLDFLKGE--TGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CCTTEEHHHHHSHH--HHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred hhcCCcHHHHHhhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 99999999999431 2235889999999999999999999986 999999999999999999999999999765432
Q ss_pred CceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 671 KTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 671 ~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
.........++..|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~ 467 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 467 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTT
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 2222233457789999999999999999999999999999999 9999975
No 202
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=301.99 Aligned_cols=202 Identities=29% Similarity=0.459 Sum_probs=174.5
Q ss_pred hCCCcccceecccCceEEEEEEE-----cCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC--EE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQL-----TDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD--QL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~-----~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~ 585 (732)
..+|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45688899999999999999984 368999999998766666778999999999999999999999987654 67
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
++||||+++++|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 120 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred EEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchh
Confidence 9999999999999999543 245899999999999999999999986 9999999999999999999999999998
Q ss_pred eCCccCcee--eecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHI--STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~--~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
......... .....++..|+|||.+.+..++.++|||||||++|||+||..|+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~ 250 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence 765443321 2234577789999999988899999999999999999999998863
No 203
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=300.98 Aligned_cols=206 Identities=30% Similarity=0.511 Sum_probs=170.1
Q ss_pred HHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcC-CCCceeeeeeeEEe----
Q 040398 508 QIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCL-QHPNLVKLYGCCIE---- 581 (732)
Q Consensus 508 ~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~---- 581 (732)
++....++|++.+.||+|+||.||+|++. +|+.||+|++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 33446788999999999999999999985 78999999987543 3457789999999999 89999999999987
Q ss_pred --CCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEE
Q 040398 582 --GDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKIS 659 (732)
Q Consensus 582 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~ 659 (732)
.+..++||||+++++|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEEC
T ss_pred cccceEEEEEEcCCCCcHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEe
Confidence 46889999999999999998643 2346899999999999999999999996 9999999999999999999999
Q ss_pred eeecceeCCccCceeeecccCccccccchhcc-----cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 660 DFGLAKLDEEEKTHISTRVAGTIGYMAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 660 DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|||++........ ......|++.|+|||++. +..++.++|||||||++|+|++|+.||..
T Consensus 172 Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 236 (326)
T 2x7f_A 172 DFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236 (326)
T ss_dssp CCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 9999875543221 123356899999999987 56789999999999999999999999964
No 204
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.3e-33 Score=297.64 Aligned_cols=200 Identities=28% Similarity=0.389 Sum_probs=165.1
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEE-----------
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCI----------- 580 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~----------- 580 (732)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468899999999999999999987 58999999988766666788999999999999999999999873
Q ss_pred ---eCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEc-CCCCe
Q 040398 581 ---EGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD-RDLNP 656 (732)
Q Consensus 581 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~ 656 (732)
+.+..++||||++ |+|.+++.. ..+++..++.++.||++||+|||+++ |+||||||+||+++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeE
Confidence 3468899999997 699998842 46889999999999999999999996 99999999999997 56789
Q ss_pred EEEeeecceeCCccCc--eeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 657 KISDFGLAKLDEEEKT--HISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 657 kL~DfGla~~~~~~~~--~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
||+|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 161 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 228 (320)
T 2i6l_A 161 KIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGA 228 (320)
T ss_dssp EECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCC
Confidence 9999999986543221 11223457889999998865 67899999999999999999999999753
No 205
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.8e-33 Score=308.12 Aligned_cols=198 Identities=27% Similarity=0.362 Sum_probs=163.4
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC------EEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD------QLM 586 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~ 586 (732)
..+|++.+.||+|+||.||+|+..++..+|+|++...... ..+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 3468899999999999999999987777999987643222 236999999999999999999987543 378
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEc-CCCCeEEEeeecce
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD-RDLNPKISDFGLAK 665 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~kL~DfGla~ 665 (732)
+||||++++.+ +.+.........+++..++.++.||++||+|||+.+ |+||||||+|||++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPETVY-RASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEEHH-HHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCccHH-HHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999987544 333222223457899999999999999999999996 99999999999999 78999999999998
Q ss_pred eCCccCceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 191 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 244 (394)
T 4e7w_A 191 ILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPG 244 (394)
T ss_dssp ECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 7644332 2345789999999998765 589999999999999999999999975
No 206
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-33 Score=301.06 Aligned_cols=202 Identities=31% Similarity=0.484 Sum_probs=167.1
Q ss_pred hCCCcccceecccCceEEEEEEEcC-----CeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTD-----GTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLM 586 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~-----g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 586 (732)
..+|+..+.||+|+||.||+|+... +..||+|++.... ......+.+|++++++++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 4567788999999999999998652 3469999987543 334567899999999999999999999999999999
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+||||+++++|.+++... ...+++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 123 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchh
Confidence 999999999999998542 346899999999999999999999996 99999999999999999999999999976
Q ss_pred CCccCce--eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 667 DEEEKTH--ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 667 ~~~~~~~--~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
....... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~ 253 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE 253 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence 5433221 1122346788999999998999999999999999999999 9999964
No 207
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.9e-33 Score=303.97 Aligned_cols=208 Identities=25% Similarity=0.332 Sum_probs=162.9
Q ss_pred HHHHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCE
Q 040398 506 LKQIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQ 584 (732)
Q Consensus 506 ~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 584 (732)
........++|++.+.||+|+||.||+|++. +|+.||||++.... .....+.+|++.+..++||||+++++++...+.
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 15 DERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp SHHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 3556678899999999999999999999986 78999999886543 233456788889999999999999999976433
Q ss_pred -------EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHH--hCCCCceEeCCCCCCCeEEcC-CC
Q 040398 585 -------LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLH--EESRFKIVHRDIKATNVLLDR-DL 654 (732)
Q Consensus 585 -------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH--~~~~~~iiH~Dlkp~NILl~~-~~ 654 (732)
.++||||+++ +|.+.+.........+++..+..++.||+.||+||| +.+ |+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCC
Confidence 7899999986 555544332234557889999999999999999999 775 999999999999997 89
Q ss_pred CeEEEeeecceeCCccCceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 655 NPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 655 ~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.+||+|||++........ .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 170 ~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 234 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRG 234 (360)
T ss_dssp EEEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cEEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCC
Confidence 999999999986554332 2345789999999998765 489999999999999999999999975
No 208
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-33 Score=306.73 Aligned_cols=201 Identities=31% Similarity=0.444 Sum_probs=160.2
Q ss_pred CCcccceecccCceEEEEEEEc--CC--eEEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEe-CCEEEEE
Q 040398 515 NFDPMNKIGEGGFGPVYKGQLT--DG--TIIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIE-GDQLMLV 588 (732)
Q Consensus 515 ~f~~~~~LG~G~fg~Vy~a~~~--~g--~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv 588 (732)
.|++.+.||+|+||.||+|++. ++ ..||+|.+... .....+++.+|++++++++||||+++++++.+ ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667789999999999999864 33 46899998754 33446789999999999999999999998765 4578999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++.. ....+++..+..++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhh---cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccc
Confidence 999999999999953 2345788999999999999999999996 9999999999999999999999999997543
Q ss_pred ccCc---eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 669 EEKT---HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 669 ~~~~---~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
.... .......+|+.|+|||++.+..++.++|||||||++|||+| |.+||...
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~ 300 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence 3221 11223457889999999999999999999999999999999 67777643
No 209
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=323.85 Aligned_cols=201 Identities=28% Similarity=0.468 Sum_probs=167.1
Q ss_pred CCCcccc-eecccCceEEEEEEEc---CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 514 SNFDPMN-KIGEGGFGPVYKGQLT---DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 514 ~~f~~~~-~LG~G~fg~Vy~a~~~---~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
+++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+++.+|++++++++|||||++++++.. +..++|
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 3444444 7999999999999764 46789999997653 3456789999999999999999999999876 568999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++|+|.+++.. ....+++..+..++.||++||+|||+++ |+||||||+|||+++++.+||+|||+++...
T Consensus 414 ~E~~~~g~L~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EECCTTCBHHHHHTT---CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEeCCCCcHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 999999999999853 2446899999999999999999999996 9999999999999999999999999998654
Q ss_pred ccCceee--ecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 669 EEKTHIS--TRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 669 ~~~~~~~--~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
....... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 3322211 12335689999999999999999999999999999998 99999753
No 210
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-34 Score=306.84 Aligned_cols=198 Identities=19% Similarity=0.218 Sum_probs=169.6
Q ss_pred hCCCcccceecccCceEEEEEEEcC---------CeEEEEEEcccccccchHHHHHHHHHHhcCCCCceee---------
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTD---------GTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVK--------- 574 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~---------g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~--------- 574 (732)
.++|++.+.||+|+||.||+|+... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 4678999999999999999998763 789999998643 45788999999999999987
Q ss_pred ------eeeeEEe-CCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCC
Q 040398 575 ------LYGCCIE-GDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATN 647 (732)
Q Consensus 575 ------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~N 647 (732)
+++++.. ++..++||||+ +++|.+++... ....+++..++.++.||+.||+|||+++ |+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS--PKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS--GGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC--CcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHH
Confidence 6677776 68899999999 99999999543 1356899999999999999999999996 9999999999
Q ss_pred eEEcCCC--CeEEEeeecceeCCccCce------eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 648 VLLDRDL--NPKISDFGLAKLDEEEKTH------ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 648 ILl~~~~--~~kL~DfGla~~~~~~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
||++.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 8999999999765443221 1133579999999999999899999999999999999999999997
Q ss_pred CC
Q 040398 720 YV 721 (732)
Q Consensus 720 ~~ 721 (732)
..
T Consensus 270 ~~ 271 (352)
T 2jii_A 270 NC 271 (352)
T ss_dssp GG
T ss_pred cC
Confidence 54
No 211
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.2e-33 Score=293.91 Aligned_cols=202 Identities=29% Similarity=0.422 Sum_probs=167.7
Q ss_pred hCCCcccceecccCceEEEEEEEcC----CeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEe-CCEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTD----GTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIE-GDQLM 586 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~----g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~ 586 (732)
...|++.+.||+|+||.||+|++.+ +..+|+|.+.... ....+.+.+|++++++++||||+++++++.+ ++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3467888999999999999998642 3468999887543 3445778999999999999999999998654 56789
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+||||+++++|.+++.. ....+++..+..++.||++||+|||+++ |+||||||+||++++++.+||+|||++..
T Consensus 104 ~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEECCTTCBHHHHHHC---TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEeCCCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccc
Confidence 99999999999999954 2345789999999999999999999996 99999999999999999999999999976
Q ss_pred CCccCc---eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 667 DEEEKT---HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 667 ~~~~~~---~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
...... .......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~ 235 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 235 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 543321 12233457889999999999999999999999999999999 5556654
No 212
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3e-33 Score=293.28 Aligned_cols=200 Identities=31% Similarity=0.442 Sum_probs=169.1
Q ss_pred hCCCcccc-eecccCceEEEEEEEc---CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEE
Q 040398 513 TSNFDPMN-KIGEGGFGPVYKGQLT---DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLM 586 (732)
Q Consensus 513 ~~~f~~~~-~LG~G~fg~Vy~a~~~---~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 586 (732)
.++|++.+ .||+|+||.||+|.+. +++.||||++.... ....+++.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 9999999999999642 47899999987643 22357799999999999999999999998 667789
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+||||+++++|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 94 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999954 345899999999999999999999996 99999999999999999999999999987
Q ss_pred CCccCcee--eecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 667 DEEEKTHI--STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 667 ~~~~~~~~--~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 65433322 122346788999999998889999999999999999999 9999975
No 213
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=302.05 Aligned_cols=198 Identities=32% Similarity=0.489 Sum_probs=159.2
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHH--HHHHhcCCCCceeeeeeeEEe-----CCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNE--IGTISCLQHPNLVKLYGCCIE-----GDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E--~~~l~~l~H~nIv~l~~~~~~-----~~~~ 585 (732)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..| +..+..++||||+++++.+.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 56889999999999999999977 58999999986443 2334444 444556899999999986553 2367
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCC------CCceEeCCCCCCCeEEcCCCCeEEE
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEES------RFKIVHRDIKATNVLLDRDLNPKIS 659 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~------~~~iiH~Dlkp~NILl~~~~~~kL~ 659 (732)
++||||+++|+|.+++... ..++..+..++.||++||+|||+.. ..+|+||||||+|||++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH-----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhc-----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 8999999999999999432 3488999999999999999999881 0139999999999999999999999
Q ss_pred eeecceeCCccC-------ceeeecccCccccccchhccc-------CCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 660 DFGLAKLDEEEK-------THISTRVAGTIGYMAPEYALW-------GYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 660 DfGla~~~~~~~-------~~~~~~~~gt~~y~APE~~~~-------~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
|||++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~ 236 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF 236 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence 999997654321 112224569999999999886 456778999999999999999987764
No 214
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=3e-33 Score=306.25 Aligned_cols=199 Identities=24% Similarity=0.337 Sum_probs=169.1
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCC--------CCceeeeeeeEE---
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ--------HPNLVKLYGCCI--- 580 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~--- 580 (732)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 468999999999999999999875 7899999998743 334567889999999986 788999999988
Q ss_pred -eCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC-CCCceEeCCCCCCCeEEcCCC----
Q 040398 581 -EGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE-SRFKIVHRDIKATNVLLDRDL---- 654 (732)
Q Consensus 581 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~---- 654 (732)
.....++||||+ ++++.+.+... ....+++..++.++.||+.||+|||++ + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKS--NYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHT--TTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhc--ccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhh
Confidence 456789999999 55666655432 224689999999999999999999998 6 99999999999999775
Q ss_pred ---------------------------------------------CeEEEeeecceeCCccCceeeecccCccccccchh
Q 040398 655 ---------------------------------------------NPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEY 689 (732)
Q Consensus 655 ---------------------------------------------~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~ 689 (732)
.+||+|||++...... .....||+.|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChh
Confidence 7999999999866543 223568999999999
Q ss_pred cccCCCCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 690 ALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 690 ~~~~~~~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
+.+..++.++|||||||++|||+||+.||....
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 297 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHS 297 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 999999999999999999999999999997533
No 215
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.9e-33 Score=305.58 Aligned_cols=196 Identities=10% Similarity=0.067 Sum_probs=151.5
Q ss_pred CCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc---cchHHHHHHH---HHHhcCCCCceeeee-------eeE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR---QGNREFLNEI---GTISCLQHPNLVKLY-------GCC 579 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~~ 579 (732)
.+|++.+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|+ +.++. +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhe
Confidence 35788999999999999999976 799999999986532 3345667774 45555 799988754 444
Q ss_pred EeC-----------------CEEEEEEEecCCCchhHHhhcCCCCcccCCHHHH------HHHHHHHHHHHHHHHhCCCC
Q 040398 580 IEG-----------------DQLMLVYEYLENNSLAHALFGGENSQLKLNWSVR------QKICLGIARGLAFLHEESRF 636 (732)
Q Consensus 580 ~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~i~~aL~yLH~~~~~ 636 (732)
..+ ...++||||++ |+|.+++... ...+.+..+ ..++.||++||+|||+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~-- 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL---DFVYVFRGDEGILALHILTAQLIRLAANLQSKG-- 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH---HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh---ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC--
Confidence 433 34899999998 8999999543 123344455 678899999999999996
Q ss_pred ceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhccc--CCCCCchhHHHHHHHHHHHHcC
Q 040398 637 KIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALW--GYLTYKADVYSFGVVALEIVSG 714 (732)
Q Consensus 637 ~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvll~elltG 714 (732)
|+||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 215 -ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 215 -LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp -EEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred -CccCcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 9999999999999999999999999998654321 13457799999999987 6899999999999999999999
Q ss_pred CCCCCCC
Q 040398 715 KNNMSYV 721 (732)
Q Consensus 715 ~~P~~~~ 721 (732)
+.||...
T Consensus 290 ~~Pf~~~ 296 (371)
T 3q60_A 290 FLPFGLV 296 (371)
T ss_dssp SCSTTBC
T ss_pred CCCCCCc
Confidence 9999764
No 216
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.8e-33 Score=295.03 Aligned_cols=242 Identities=27% Similarity=0.421 Sum_probs=226.8
Q ss_pred CCcc--cCCccCCCCCCCCEEEccc-CcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCcc
Q 040398 4 SLPG--TLPPQIVNLPYLETVDFAY-NYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGT 79 (732)
Q Consensus 4 ~~~g--~lP~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 79 (732)
.++| .+|+.+.++++|++|+|++ |.+.+.+|..+..+ +|++|+|++|++++.+|..++++++|++|+|++|.+++.
T Consensus 61 ~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (313)
T 1ogq_A 61 NLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGT 140 (313)
T ss_dssp CCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESC
T ss_pred CccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCc
Confidence 4667 8999999999999999995 99999999999988 899999999999999999999999999999999999999
Q ss_pred CCccccCCCCCCEEeCCCCcccccCCccccCCC-CCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccC
Q 040398 80 IPRELGNLVNLETLRLSSNRLIGNLPMELVKLK-NLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISA 158 (732)
Q Consensus 80 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 158 (732)
+|..+..+++|++|+|++|++++.+|..+..++ +|+.|++++|++++.+|..+..++ |+.|+|++|++++..|..+..
T Consensus 141 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~ 219 (313)
T 1ogq_A 141 LPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGS 219 (313)
T ss_dssp CCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCT
T ss_pred CChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhc
Confidence 999999999999999999999999999999998 999999999999999999999998 999999999999999999999
Q ss_pred ccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHH
Q 040398 159 LDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQI 238 (732)
Q Consensus 159 l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~ 238 (732)
+++|+.|+|++|.+....+. +..+++|++|+|++|+|++.+|..+..+++|+.|+|++|+++|.+|+.
T Consensus 220 l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~----------- 287 (313)
T 1ogq_A 220 DKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG----------- 287 (313)
T ss_dssp TSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-----------
T ss_pred CCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-----------
Confidence 99999999999999876555 888999999999999999999999999999999999999999999974
Q ss_pred HHHHhccCCCCeEEccCCc-CcCCC
Q 040398 239 LMFIRGVYEHQSLDLSYNN-FTWQS 262 (732)
Q Consensus 239 ~~~~~~l~~L~~LdLs~N~-l~~~~ 262 (732)
+.+++|+.|++++|+ +.|.|
T Consensus 288 ----~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 288 ----GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp ----TTGGGSCGGGTCSSSEEESTT
T ss_pred ----ccccccChHHhcCCCCccCCC
Confidence 345789999999998 55543
No 217
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.2e-33 Score=299.51 Aligned_cols=205 Identities=30% Similarity=0.403 Sum_probs=170.1
Q ss_pred hCCCcccceecccCceEEEEEEE------cCCeEEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQL------TDGTIIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~------~~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 585 (732)
.++|++.+.||+|+||.||+|++ .+++.||||++... ......++.+|+.++++++||||+++++++.+.+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788999999999999999983 25789999999754 334456789999999999999999999999999999
Q ss_pred EEEEEecCCCchhHHhhcCCC---CcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC---CCCeEEE
Q 040398 586 MLVYEYLENNSLAHALFGGEN---SQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR---DLNPKIS 659 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kL~ 659 (732)
++||||+++++|.+++..... ....+++..++.++.||++||+|||+.+ |+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999965432 2245899999999999999999999996 999999999999984 4469999
Q ss_pred eeecceeCCccC-ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 660 DFGLAKLDEEEK-THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 660 DfGla~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
|||++....... ........|++.|+|||++.+..++.++|||||||++|+|+| |+.||..
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 248 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPS 248 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 999986432211 112223467889999999999999999999999999999998 9999974
No 218
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=9.4e-33 Score=291.28 Aligned_cols=203 Identities=25% Similarity=0.323 Sum_probs=169.0
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc----ccchHHHHHHHHHHhcCCCCceeeeeeeEE--eCCE
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS----RQGNREFLNEIGTISCLQHPNLVKLYGCCI--EGDQ 584 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~~ 584 (732)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++. +.+.
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3578999999999999999999975 78999999987542 234577999999999999999999999985 4457
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
.++||||++++ |.+++... ....+++..+..++.||++||+|||+++ |+||||||+||+++.++.+||+|||.+
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~ 156 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSV--PEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVA 156 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHS--TTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEehhccCC-HHHHHHhC--cccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccc
Confidence 89999999876 66666432 2346899999999999999999999996 999999999999999999999999999
Q ss_pred eeCCccC-ceeeecccCccccccchhcccCC--CCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEK-THISTRVAGTIGYMAPEYALWGY--LTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~-~~~~~~~~gt~~y~APE~~~~~~--~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
....... ........||+.|+|||++.+.. .+.++||||||+++|||++|+.||..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 215 (305)
T 2wtk_C 157 EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215 (305)
T ss_dssp EECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8654322 22233456999999999987643 47899999999999999999999975
No 219
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5e-33 Score=299.80 Aligned_cols=199 Identities=24% Similarity=0.375 Sum_probs=169.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeC-----CEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEG-----DQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~ 585 (732)
.++|++.+.||+|+||.||+|++. +|+.||||++.... .....++.+|++++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 568999999999999999999986 79999999986533 33456788999999999999999999987764 678
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
++||||++ ++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 90 ~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 599998843 36899999999999999999999996 9999999999999999999999999998
Q ss_pred eCCccCce---------eeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 666 LDEEEKTH---------ISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~---------~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 225 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG 225 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence 65432211 1123568999999998764 6789999999999999999999999975
No 220
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.4e-33 Score=307.23 Aligned_cols=203 Identities=25% Similarity=0.386 Sum_probs=155.4
Q ss_pred hCCCcc-cceecccCceEEEEEEEc---CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEe--CCEEE
Q 040398 513 TSNFDP-MNKIGEGGFGPVYKGQLT---DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIE--GDQLM 586 (732)
Q Consensus 513 ~~~f~~-~~~LG~G~fg~Vy~a~~~---~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~ 586 (732)
.+.|++ .++||+|+||.||+|+.+ +++.||+|++.... ....+.+|++++++++||||+++++++.. ....+
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 344665 457999999999999965 57899999987542 24578899999999999999999999965 67899
Q ss_pred EEEEecCCCchhHHhhcC-----CCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE----cCCCCeE
Q 040398 587 LVYEYLENNSLAHALFGG-----ENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL----DRDLNPK 657 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~-----~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl----~~~~~~k 657 (732)
+||||+++ +|.+++... ......+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEE
Confidence 99999964 787776422 112235899999999999999999999996 9999999999999 6778999
Q ss_pred EEeeecceeCCccCc--eeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 658 ISDFGLAKLDEEEKT--HISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 658 L~DfGla~~~~~~~~--~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
|+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 999999986543221 222346799999999999874 5899999999999999999999999643
No 221
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=4.7e-33 Score=302.46 Aligned_cols=194 Identities=26% Similarity=0.398 Sum_probs=166.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEE----
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQL---- 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---- 585 (732)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ....+++.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 568899999999999999999876 79999999987642 33357788999999999999999999999877654
Q ss_pred --EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 586 --MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 586 --~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
++||||++ ++|.+.+. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 68888772 24899999999999999999999996 99999999999999999999999999
Q ss_pred ceeCCccCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 9754432 234578999999999887 6889999999999999999999999974
No 222
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=8.4e-33 Score=296.62 Aligned_cols=203 Identities=31% Similarity=0.430 Sum_probs=171.1
Q ss_pred HHHHHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhc--CCCCceeeeeeeEEeCC
Q 040398 506 LKQIRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISC--LQHPNLVKLYGCCIEGD 583 (732)
Q Consensus 506 ~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~ 583 (732)
+.......++|++.+.||+|+||.||+|+.. |+.||||++... ..+.+.+|.+++.. ++||||+++++++...+
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 3334456778999999999999999999884 899999998643 34667888888887 78999999999998876
Q ss_pred ----EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHH--------hCCCCceEeCCCCCCCeEEc
Q 040398 584 ----QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLH--------EESRFKIVHRDIKATNVLLD 651 (732)
Q Consensus 584 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH--------~~~~~~iiH~Dlkp~NILl~ 651 (732)
..++||||+++|+|.+++.. ..+++..++.++.||+.||+||| +. +|+||||||+||+++
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~ 181 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVK 181 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEEC
T ss_pred CccceeEEEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEEC
Confidence 79999999999999999953 35899999999999999999999 66 499999999999999
Q ss_pred CCCCeEEEeeecceeCCccCce---eeecccCccccccchhcccC------CCCCchhHHHHHHHHHHHHcC--------
Q 040398 652 RDLNPKISDFGLAKLDEEEKTH---ISTRVAGTIGYMAPEYALWG------YLTYKADVYSFGVVALEIVSG-------- 714 (732)
Q Consensus 652 ~~~~~kL~DfGla~~~~~~~~~---~~~~~~gt~~y~APE~~~~~------~~~~k~DvwSlGvll~elltG-------- 714 (732)
.++.+||+|||++......... ......||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~ 261 (342)
T 1b6c_B 182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHE 261 (342)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccc
Confidence 9999999999999765443322 22345799999999998765 233689999999999999999
Q ss_pred --CCCCCC
Q 040398 715 --KNNMSY 720 (732)
Q Consensus 715 --~~P~~~ 720 (732)
+.||..
T Consensus 262 ~~~~p~~~ 269 (342)
T 1b6c_B 262 DYQLPYYD 269 (342)
T ss_dssp CCCCTTTT
T ss_pred ccccCccc
Confidence 778764
No 223
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-33 Score=292.55 Aligned_cols=198 Identities=29% Similarity=0.389 Sum_probs=166.9
Q ss_pred CCcccceecccCceEEEEEEEc-C---CeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEE-EEE
Q 040398 515 NFDPMNKIGEGGFGPVYKGQLT-D---GTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQL-MLV 588 (732)
Q Consensus 515 ~f~~~~~LG~G~fg~Vy~a~~~-~---g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~lv 588 (732)
.|...+.||+|+||.||+|++. + +..+|+|++.... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 3455689999999999999853 2 3479999987543 34457889999999999999999999999876655 999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+.+++|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 999999999999954 2346789999999999999999999996 9999999999999999999999999997543
Q ss_pred ccCc---eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCC
Q 040398 669 EEKT---HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNM 718 (732)
Q Consensus 669 ~~~~---~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~ 718 (732)
.... .......+++.|+|||.+.+..++.++|||||||++|+|++|..|+
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~ 228 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP 228 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCT
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCC
Confidence 3221 1223356788999999999999999999999999999999966654
No 224
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=6e-33 Score=295.69 Aligned_cols=201 Identities=28% Similarity=0.466 Sum_probs=169.6
Q ss_pred HhCCCcccceecccCceEEEEEEE--cCCeEEEEEEcccccc--cchHHHHHHHHHHhcC---CCCceeeeeeeEE----
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQL--TDGTIIAVKLLSSKSR--QGNREFLNEIGTISCL---QHPNLVKLYGCCI---- 580 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~--~~g~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~---- 580 (732)
+.++|++.+.||+|+||.||+|+. .+|+.||+|++..... .....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 467899999999999999999998 3689999999865322 2233566777766665 8999999999987
Q ss_pred -eCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEE
Q 040398 581 -EGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKIS 659 (732)
Q Consensus 581 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~ 659 (732)
.....++||||++ |+|.+++.... ...+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 69999885432 234899999999999999999999996 9999999999999999999999
Q ss_pred eeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 660 DFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 660 DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|||++....... ......||..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 221 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 999997654322 22345689999999999999999999999999999999999999964
No 225
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.8e-33 Score=291.46 Aligned_cols=197 Identities=31% Similarity=0.493 Sum_probs=164.4
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEeC-CEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIEG-DQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lv~e~ 591 (732)
.++|++.+.||+|+||.||+|+.. |+.||||++.... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 567889999999999999999875 8999999987543 457789999999999999999999997654 478999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccC
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEK 671 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~ 671 (732)
+++++|.+++... ....+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 97 MAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CTTEEHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred CCCCCHHHHHHhc--ccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 9999999998532 1223789999999999999999999996 9999999999999999999999999987543321
Q ss_pred ceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 672 THISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 672 ~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...
T Consensus 172 ----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 218 (278)
T 1byg_A 172 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 218 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred ----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 12357889999999998999999999999999999998 99999754
No 226
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.5e-33 Score=299.66 Aligned_cols=205 Identities=25% Similarity=0.307 Sum_probs=158.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCC-CCceeeeeeeEEe--------C
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ-HPNLVKLYGCCIE--------G 582 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--------~ 582 (732)
..+|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|+.+++++. ||||+++++++.. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 457889999999999999999975 78999999987666666778899999999996 9999999999853 3
Q ss_pred CEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeee
Q 040398 583 DQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFG 662 (732)
Q Consensus 583 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfG 662 (732)
...++||||++ |+|.+++.... ....+++..++.++.||+.||+|||+.+ .+|+||||||+|||++.++.+||+|||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHH-TTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred ceEEEEEEecC-CCHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCc
Confidence 45899999996 69998875421 2346899999999999999999999873 239999999999999999999999999
Q ss_pred cceeCCccCce-----------eeecccCccccccchhc---ccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 663 LAKLDEEEKTH-----------ISTRVAGTIGYMAPEYA---LWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 663 la~~~~~~~~~-----------~~~~~~gt~~y~APE~~---~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 255 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence 99765432221 11134589999999998 566789999999999999999999999974
No 227
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3.9e-33 Score=322.90 Aligned_cols=194 Identities=31% Similarity=0.458 Sum_probs=163.4
Q ss_pred ceecccCceEEEEEEEc---CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEEEecCC
Q 040398 520 NKIGEGGFGPVYKGQLT---DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVYEYLEN 594 (732)
Q Consensus 520 ~~LG~G~fg~Vy~a~~~---~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 594 (732)
+.||+|+||.||+|.+. +++.||||+++... ....+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 46889999987643 2345789999999999999999999999864 558899999999
Q ss_pred CchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCc--
Q 040398 595 NSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKT-- 672 (732)
Q Consensus 595 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~-- 672 (732)
|+|.+++.. ...+++..+..|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 454 g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 999999953 346899999999999999999999996 99999999999999999999999999986544322
Q ss_pred eeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCCC
Q 040398 673 HISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSYV 721 (732)
Q Consensus 673 ~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~~ 721 (732)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 576 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 12223456789999999999999999999999999999998 99999753
No 228
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.8e-32 Score=306.72 Aligned_cols=201 Identities=28% Similarity=0.352 Sum_probs=171.5
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCC-CceeeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQH-PNLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lv~e 590 (732)
.++|++.++||+|+||.||+|++. +++.||||++..... .+++.+|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 568999999999999999999975 789999998765433 2457889999999987 556666677778899999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE---cCCCCeEEEeeecceeC
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL---DRDLNPKISDFGLAKLD 667 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl---~~~~~~kL~DfGla~~~ 667 (732)
|+ +++|.+++... ...+++..++.|+.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~ 156 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY 156 (483)
T ss_dssp CC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred CC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence 99 99999998532 346899999999999999999999996 9999999999999 68899999999999865
Q ss_pred CccCce------eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 668 EEEKTH------ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 668 ~~~~~~------~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
...... ......||..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~ 217 (483)
T 3sv0_A 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 217 (483)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 443221 1224679999999999999999999999999999999999999998643
No 229
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.7e-32 Score=293.27 Aligned_cols=198 Identities=24% Similarity=0.370 Sum_probs=171.5
Q ss_pred hCCCcccceecccCceEEEEEEE-c-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCc------eeeeeeeEEeCCE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQL-T-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPN------LVKLYGCCIEGDQ 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~-~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 584 (732)
.++|++.+.||+|+||.||+|.. . +++.||||++... ....+.+.+|+++++.++|++ ++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 56899999999999999999987 3 6899999998754 233567888999998887654 9999999999999
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC------------
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR------------ 652 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~------------ 652 (732)
.++||||+ +++|.+++.... ...+++..+..++.||++||+|||+++ |+||||||+|||++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----
T ss_pred EEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccc
Confidence 99999999 889999885432 236889999999999999999999996 999999999999987
Q ss_pred -------CCCeEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 653 -------DLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 653 -------~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 6679999999998654322 2457899999999999999999999999999999999999999753
No 230
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.4e-32 Score=324.67 Aligned_cols=249 Identities=30% Similarity=0.493 Sum_probs=235.2
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCcc
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRE 83 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 83 (732)
++|.+|+.+.++++|++|+|++|++++.+|..+..+ +|++|+|++|++++.+|..++.+++|++|+|++|++++.+|..
T Consensus 406 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 485 (768)
T 3rgz_A 406 FTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 485 (768)
T ss_dssp EEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGG
T ss_pred cccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHH
Confidence 567899999999999999999999999999999988 7999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccc-------
Q 040398 84 LGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSI------- 156 (732)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~------- 156 (732)
+.++++|++|+|++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|+|++|+++|.+|..+
T Consensus 486 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~ 565 (768)
T 3rgz_A 486 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 565 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCB
T ss_pred HhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchh
Confidence 9999999999999999999999999999999999999999999999999999999999999999988877643
Q ss_pred ---------------------------------------------------------------cCccCCCeeeccCcCCC
Q 040398 157 ---------------------------------------------------------------SALDKLNQLRISDLQGP 173 (732)
Q Consensus 157 ---------------------------------------------------------------~~l~~L~~L~ls~N~l~ 173 (732)
..+++|+.|+|++|+++
T Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~ 645 (768)
T 3rgz_A 566 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLS 645 (768)
T ss_dssp CCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCB
T ss_pred hhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCccc
Confidence 33577899999999999
Q ss_pred CCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEc
Q 040398 174 NQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDL 253 (732)
Q Consensus 174 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdL 253 (732)
+..+..++.+++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|+. +.++..|++|||
T Consensus 646 g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~--------------l~~l~~L~~L~l 711 (768)
T 3rgz_A 646 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA--------------MSALTMLTEIDL 711 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGG--------------GGGCCCCSEEEC
T ss_pred ccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChH--------------HhCCCCCCEEEC
Confidence 999999999999999999999999999999999999999999999999999976 778899999999
Q ss_pred cCCcCcCCCCCCcc
Q 040398 254 SYNNFTWQSPEQPA 267 (732)
Q Consensus 254 s~N~l~~~~p~~~~ 267 (732)
|+|+|+|.+|....
T Consensus 712 s~N~l~g~iP~~~~ 725 (768)
T 3rgz_A 712 SNNNLSGPIPEMGQ 725 (768)
T ss_dssp CSSEEEEECCSSSS
T ss_pred cCCcccccCCCchh
Confidence 99999999997654
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2e-33 Score=297.80 Aligned_cols=208 Identities=24% Similarity=0.359 Sum_probs=170.1
Q ss_pred ccHHHHHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccc--cccchHHHHHHHHHHhcCC--CCceeeeeeeE
Q 040398 504 FTLKQIRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSK--SRQGNREFLNEIGTISCLQ--HPNLVKLYGCC 579 (732)
Q Consensus 504 ~~~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~ 579 (732)
+.++.+....++|++.+.||+|+||.||+|+..+++.||||++... .....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3344444557789999999999999999999888999999998654 2334577899999999997 59999999999
Q ss_pred EeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEE
Q 040398 580 IEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKIS 659 (732)
Q Consensus 580 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~ 659 (732)
.+++..++||| +.+++|.+++.. ...+++..+..++.||++||+|||+.+ |+||||||+||++++ +.+||+
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~ 168 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLI 168 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEEC
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEe
Confidence 99999999999 568899999853 346889999999999999999999996 999999999999975 789999
Q ss_pred eeecceeCCccCce-eeecccCccccccchhccc-----------CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 660 DFGLAKLDEEEKTH-ISTRVAGTIGYMAPEYALW-----------GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 660 DfGla~~~~~~~~~-~~~~~~gt~~y~APE~~~~-----------~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|||++......... ......|++.|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (313)
T 3cek_A 169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 241 (313)
T ss_dssp CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhh
Confidence 99999765433221 2234568999999999875 4788899999999999999999999974
No 232
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-32 Score=289.84 Aligned_cols=195 Identities=29% Similarity=0.466 Sum_probs=161.9
Q ss_pred HhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEe---------
Q 040398 512 ATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIE--------- 581 (732)
Q Consensus 512 ~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--------- 581 (732)
..++|++.+.||+|+||.||+|+.. +++.||+|++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567999999999999999999975 7899999998643 3345678999999999999999999998865
Q ss_pred ----CCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeE
Q 040398 582 ----GDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPK 657 (732)
Q Consensus 582 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~k 657 (732)
.+..++||||+++++|.+++... ...+++..++.++.||++||+|||+++ |+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEE
Confidence 35689999999999999999542 345788999999999999999999996 99999999999999999999
Q ss_pred EEeeecceeCCccC-------------ceeeecccCccccccchhcccC-CCCCchhHHHHHHHHHHHHc
Q 040398 658 ISDFGLAKLDEEEK-------------THISTRVAGTIGYMAPEYALWG-YLTYKADVYSFGVVALEIVS 713 (732)
Q Consensus 658 L~DfGla~~~~~~~-------------~~~~~~~~gt~~y~APE~~~~~-~~~~k~DvwSlGvll~ellt 713 (732)
|+|||++....... ........||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~ 226 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY 226 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence 99999987554221 1112345689999999998764 78999999999999999998
No 233
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.5e-34 Score=304.57 Aligned_cols=190 Identities=33% Similarity=0.478 Sum_probs=148.7
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhc--CCCCceeeeeeeEEeCC----EEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISC--LQHPNLVKLYGCCIEGD----QLM 586 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~ 586 (732)
.++|++.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 357899999999999999999875 889999998643 34567778888877 79999999999998876 789
Q ss_pred EEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHH--------hCCCCceEeCCCCCCCeEEcCCCCeEE
Q 040398 587 LVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLH--------EESRFKIVHRDIKATNVLLDRDLNPKI 658 (732)
Q Consensus 587 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH--------~~~~~~iiH~Dlkp~NILl~~~~~~kL 658 (732)
+||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+ |+||||||+|||++.++.+||
T Consensus 78 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEECCTTCCHHHHHHH-----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEeccCCCCHHHHHhc-----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEE
Confidence 99999999999999943 35777889999999999999999 765 999999999999999999999
Q ss_pred EeeecceeCCccCcee---eecccCccccccchhcccC------CCCCchhHHHHHHHHHHHHcC
Q 040398 659 SDFGLAKLDEEEKTHI---STRVAGTIGYMAPEYALWG------YLTYKADVYSFGVVALEIVSG 714 (732)
Q Consensus 659 ~DfGla~~~~~~~~~~---~~~~~gt~~y~APE~~~~~------~~~~k~DvwSlGvll~elltG 714 (732)
+|||++.......... .....||+.|+|||++.+. .++.++|||||||++|||+||
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g 214 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGG
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhc
Confidence 9999996543332221 2234699999999998776 344689999999999999999
No 234
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.9e-33 Score=291.26 Aligned_cols=201 Identities=26% Similarity=0.451 Sum_probs=162.8
Q ss_pred hCCCcccceecccCceEEEEEEEc--CC--eEEEEEEcccc---cccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT--DG--TIIAVKLLSSK---SRQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~--~g--~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 585 (732)
.++|++.+.||+|+||.||+|++. ++ ..||+|++... .....+.+.+|++++++++||||+++++++.+++ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 457889999999999999999853 33 36899988754 2334578899999999999999999999988765 7
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
++||||+++++|.+++... ...+++..+..++.||++||+|||+.+ ++||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccc
Confidence 8999999999999988532 346899999999999999999999996 9999999999999999999999999998
Q ss_pred eCCccCce--eeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 666 LDEEEKTH--ISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~--~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
........ ......+|..|+|||++.+..++.++||||||+++|+|++ |+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 76543322 2223457889999999998889999999999999999999 9999964
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.8e-33 Score=288.76 Aligned_cols=200 Identities=27% Similarity=0.419 Sum_probs=172.8
Q ss_pred HHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEE
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 587 (732)
...++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 44678999999999999999999986 78999999986542 3346788999999999999999999999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC---CCeEEEeeecc
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD---LNPKISDFGLA 664 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kL~DfGla 664 (732)
||||+++++|.+.+.. ...+++..++.++.||+.||+|||+.+ ++||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIK----RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999998843 346899999999999999999999996 9999999999999764 46999999998
Q ss_pred eeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
........ .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||..
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYG 224 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCC
Confidence 75543221 123458889999998875 489999999999999999999999964
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=297.49 Aligned_cols=194 Identities=26% Similarity=0.400 Sum_probs=165.8
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCE-----
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQ----- 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----- 584 (732)
.++|.+.+.||+|+||.||+|++. +|+.||||++.... ....+++.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467889999999999999999976 79999999987542 2335678899999999999999999999987654
Q ss_pred -EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 585 -LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 585 -~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
.++||||++ ++|.+++. ..+++..+..++.||++||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeeccc
Confidence 499999997 58887762 24899999999999999999999996 99999999999999999999999999
Q ss_pred ceeCCccCceeeecccCccccccchhccc-CCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 664 AKLDEEEKTHISTRVAGTIGYMAPEYALW-GYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 664 a~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 173 ~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 173 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp TTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred ccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 8754332 223568999999999886 6789999999999999999999999975
No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.98 E-value=1.1e-32 Score=294.08 Aligned_cols=202 Identities=28% Similarity=0.429 Sum_probs=151.7
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc-ccchHHHHHHHH-HHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS-RQGNREFLNEIG-TISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~-~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... .....++..|+. +++.++||||+++++++.+++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467889999999999999999986 79999999987643 233445566665 778889999999999999999999999
Q ss_pred EecCCCchhHHhhcC-CCCcccCCHHHHHHHHHHHHHHHHHHHhC-CCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 590 EYLENNSLAHALFGG-ENSQLKLNWSVRQKICLGIARGLAFLHEE-SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 590 e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
||+++ +|.+++... ......+++..+..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99985 887776421 11245689999999999999999999997 6 999999999999999999999999999765
Q ss_pred CccCceeeecccCccccccchhc----ccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 668 EEEKTHISTRVAGTIGYMAPEYA----LWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 668 ~~~~~~~~~~~~gt~~y~APE~~----~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
..... .....||+.|+|||++ .+..++.++|||||||++|+|++|+.||..
T Consensus 177 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (327)
T 3aln_A 177 VDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred ccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 43222 2234689999999998 456789999999999999999999999975
No 238
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.98 E-value=2.8e-33 Score=297.33 Aligned_cols=207 Identities=22% Similarity=0.390 Sum_probs=169.6
Q ss_pred HHHHHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEccccc--ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCC
Q 040398 506 LKQIRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKS--RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGD 583 (732)
Q Consensus 506 ~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 583 (732)
.++.....++|++.+.||+|+||.||+|+... .+|+|++.... ....+.+.+|++++++++||||+++++++.+++
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 34444557789999999999999999998763 49999987542 233456788999999999999999999999999
Q ss_pred EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeec
Q 040398 584 QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGL 663 (732)
Q Consensus 584 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGl 663 (732)
..++||||+++++|.+++.. ....+++..++.++.||++||+|||+.+ ++||||||+||+++ ++.+||+|||+
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTS---SCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSC
T ss_pred ceEEEeecccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCC
Confidence 99999999999999999943 2346889999999999999999999996 99999999999998 67999999999
Q ss_pred ceeCCccC----ceeeecccCccccccchhccc---------CCCCCchhHHHHHHHHHHHHcCCCCCCCC
Q 040398 664 AKLDEEEK----THISTRVAGTIGYMAPEYALW---------GYLTYKADVYSFGVVALEIVSGKNNMSYV 721 (732)
Q Consensus 664 a~~~~~~~----~~~~~~~~gt~~y~APE~~~~---------~~~~~k~DvwSlGvll~elltG~~P~~~~ 721 (732)
+....... ........|++.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 246 (319)
T 2y4i_B 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ 246 (319)
T ss_dssp CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 86543211 111223458999999999874 35788999999999999999999999753
No 239
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.98 E-value=1.6e-32 Score=299.40 Aligned_cols=202 Identities=23% Similarity=0.306 Sum_probs=170.7
Q ss_pred HHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCC-CC-----ceeeeeeeEEeC
Q 040398 510 RAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ-HP-----NLVKLYGCCIEG 582 (732)
Q Consensus 510 ~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~~~~~~ 582 (732)
....++|++.+.||+|+||.||+|+.. +++.||||++... .....++.+|+++++.++ |+ +|+++++++...
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 345689999999999999999999876 7899999998743 233466778888888875 54 499999999999
Q ss_pred CEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEc--CCCCeEEEe
Q 040398 583 DQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD--RDLNPKISD 660 (732)
Q Consensus 583 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~--~~~~~kL~D 660 (732)
+..++||||++ ++|.+++.... ...+++..++.++.||+.||+|||.+ ..+|+||||||+|||++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 99999999996 59999886432 23589999999999999999999953 12599999999999995 467899999
Q ss_pred eecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 661 FGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 661 fGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 205 FG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~ 260 (382)
T 2vx3_A 205 FGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260 (382)
T ss_dssp CTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999866432 2245789999999999999999999999999999999999999974
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.98 E-value=7e-33 Score=294.79 Aligned_cols=203 Identities=23% Similarity=0.349 Sum_probs=172.3
Q ss_pred HHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccccc------chHHHHHHHHHHhcCC--CCceeeeeee
Q 040398 508 QIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQ------GNREFLNEIGTISCLQ--HPNLVKLYGC 578 (732)
Q Consensus 508 ~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~--H~nIv~l~~~ 578 (732)
+.....++|++.+.||+|+||.||+|+.. +++.||||++...... ..+++.+|++++++++ |+||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 33445778999999999999999999875 7899999998754221 2245678999999996 5999999999
Q ss_pred EEeCCEEEEEEEecCC-CchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEc-CCCCe
Q 040398 579 CIEGDQLMLVYEYLEN-NSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD-RDLNP 656 (732)
Q Consensus 579 ~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~~~ 656 (732)
+.+++..++|||++.+ ++|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++ +++.+
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~ 189 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGEL 189 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEE
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCE
Confidence 9999999999999986 899998843 346899999999999999999999986 99999999999999 77899
Q ss_pred EEEeeecceeCCccCceeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 657 KISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 657 kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
||+|||++....... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 190 kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 190 KLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp EECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence 999999998665432 224569999999999887665 6889999999999999999999964
No 241
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.98 E-value=1.8e-32 Score=318.60 Aligned_cols=203 Identities=28% Similarity=0.390 Sum_probs=170.4
Q ss_pred HHhCCCcccceecccCceEEEEEEEc----CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEE
Q 040398 511 AATSNFDPMNKIGEGGFGPVYKGQLT----DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQL 585 (732)
Q Consensus 511 ~~~~~f~~~~~LG~G~fg~Vy~a~~~----~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 585 (732)
...++|++.+.||+|+||.||+|++. .+..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCce
Confidence 34567889999999999999999874 25689999987543 334577999999999999999999999984 5668
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecce
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~ 665 (732)
++||||+++|+|.+++... ...+++..+..++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 466 ~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp EEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred EEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCe
Confidence 9999999999999999532 345899999999999999999999996 9999999999999999999999999998
Q ss_pred eCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 666 LDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 666 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
..............+|+.|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 665433333334457889999999998999999999999999999997 9999974
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.98 E-value=7e-33 Score=293.44 Aligned_cols=203 Identities=25% Similarity=0.370 Sum_probs=163.4
Q ss_pred HHHHHhCCCcccceecccCceEEEEEEEc-CCeEEEEEEccccccc------chHHHHHHHHHHhcC----CCCceeeee
Q 040398 508 QIRAATSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQ------GNREFLNEIGTISCL----QHPNLVKLY 576 (732)
Q Consensus 508 ~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l----~H~nIv~l~ 576 (732)
+.....++|++.+.||+|+||.||+|+.. +++.||+|++...... ....+.+|++++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 34456788999999999999999999875 7899999998754321 223456788888888 899999999
Q ss_pred eeEEeCCEEEEEEEe-cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEc-CCC
Q 040398 577 GCCIEGDQLMLVYEY-LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLD-RDL 654 (732)
Q Consensus 577 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~-~~~ 654 (732)
+++.+.+..++|||| +.+++|.+++.. ...+++..++.++.||++||+|||+.+ |+||||||+||+++ +++
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITE----KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTT
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCC
Confidence 999999999999999 789999999853 346899999999999999999999986 99999999999999 789
Q ss_pred CeEEEeeecceeCCccCceeeecccCccccccchhcccCCC-CCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 655 NPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYL-TYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 655 ~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.+||+|||++....... .....|+..|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 178 ~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp EEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred eEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 99999999998765432 234568999999999887665 4589999999999999999999964
No 243
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.98 E-value=2.5e-32 Score=296.52 Aligned_cols=197 Identities=23% Similarity=0.330 Sum_probs=167.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCC-----------CCceeeeeeeEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ-----------HPNLVKLYGCCI 580 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~~ 580 (732)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 457899999999999999999975 7899999998743 233567888999988886 899999999998
Q ss_pred eCC----EEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC-CCCceEeCCCCCCCeEEcC---
Q 040398 581 EGD----QLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE-SRFKIVHRDIKATNVLLDR--- 652 (732)
Q Consensus 581 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~-~~~~iiH~Dlkp~NILl~~--- 652 (732)
..+ ..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ + |+||||||+|||++.
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEET
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCC
Confidence 754 789999999 889999885432 23588999999999999999999997 6 999999999999953
Q ss_pred ---CCCeEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 653 ---DLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 653 ---~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
.+.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred CcCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 3479999999998665422 235689999999999999999999999999999999999999974
No 244
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.98 E-value=2.4e-32 Score=303.02 Aligned_cols=199 Identities=28% Similarity=0.308 Sum_probs=156.2
Q ss_pred CCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEEEEEecC
Q 040398 515 NFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLMLVYEYLE 593 (732)
Q Consensus 515 ~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 593 (732)
.|...+.||+|+||.||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 34456889999999998776678999999988643 235678899999876 89999999999999999999999996
Q ss_pred CCchhHHhhcCCCCccc---CCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC-------------CCeE
Q 040398 594 NNSLAHALFGGENSQLK---LNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD-------------LNPK 657 (732)
Q Consensus 594 ~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~-------------~~~k 657 (732)
|+|.+++......... .++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 6999999654322211 134456789999999999999986 9999999999999754 4799
Q ss_pred EEeeecceeCCccCce---eeecccCccccccchhccc-------CCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 658 ISDFGLAKLDEEEKTH---ISTRVAGTIGYMAPEYALW-------GYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 658 L~DfGla~~~~~~~~~---~~~~~~gt~~y~APE~~~~-------~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
|+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||..
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 242 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence 9999999876543322 1224579999999999875 678999999999999999999 9999964
No 245
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.97 E-value=6.7e-32 Score=290.74 Aligned_cols=197 Identities=22% Similarity=0.337 Sum_probs=168.9
Q ss_pred hCCCcccceecccCceEEEEEEEc-CC-eEEEEEEcccccccchHHHHHHHHHHhcCCCCc------eeeeeeeEEeCCE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DG-TIIAVKLLSSKSRQGNREFLNEIGTISCLQHPN------LVKLYGCCIEGDQ 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~ 584 (732)
.++|++.+.||+|+||.||+|+.. ++ +.||+|++... ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 568999999999999999999875 44 78999998743 234567888999999987766 8999999999999
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEE--------------
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLL-------------- 650 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl-------------- 650 (732)
.++||||+ ++++.+.+... ....+++..++.++.||++||+|||+++ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKEN--NFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred EEEEEecc-CCChHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccc
Confidence 99999999 56676666432 2236899999999999999999999986 9999999999999
Q ss_pred -----cCCCCeEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 651 -----DRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 651 -----~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 667899999999998654322 235799999999999999999999999999999999999999975
No 246
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=4.1e-32 Score=290.90 Aligned_cols=197 Identities=22% Similarity=0.275 Sum_probs=146.8
Q ss_pred HhCCCcccc-eecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeeeEEe----CCEE
Q 040398 512 ATSNFDPMN-KIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGCCIE----GDQL 585 (732)
Q Consensus 512 ~~~~f~~~~-~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~ 585 (732)
..++|.+.+ .||+|+||.||+|++. +|+.||||++.... ....+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356888855 6999999999999987 79999999986432 222223344667799999999999876 4568
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCC---CCeEEEeee
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRD---LNPKISDFG 662 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~---~~~kL~DfG 662 (732)
++||||+++|+|.+++... ....+++..++.++.||++||+|||+++ |+||||||+||+++.+ +.+||+|||
T Consensus 102 ~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQER--GDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEeccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccc
Confidence 9999999999999999643 2246899999999999999999999996 9999999999999864 559999999
Q ss_pred cceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 663 LAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 663 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 177 ~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (336)
T 3fhr_A 177 FAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS 231 (336)
T ss_dssp TCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred cceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 997654322 2235689999999999888899999999999999999999999964
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=4.2e-32 Score=318.08 Aligned_cols=192 Identities=23% Similarity=0.326 Sum_probs=166.4
Q ss_pred hCCCcccceecccCceEEEEEEEc--CCeEEEEEEccccc-ccchHHHHHHHHHHhcCCCCceeeeeeeEEeCCE-----
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT--DGTIIAVKLLSSKS-RQGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQ----- 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~--~g~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----- 584 (732)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 468999999999999999999975 68999999986543 3445678999999999999999999999987655
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
.++||||+++++|.+++.. .+++..++.++.||++||+|||+++ |+||||||+|||++++ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccc
Confidence 7999999999999987732 6899999999999999999999996 9999999999999986 8999999999
Q ss_pred eeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 665 KLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 665 ~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
+..... ....||++|+|||++.+.. +.++|||||||++|+|++|..||..
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~ 278 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNG 278 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcc
Confidence 866543 2356999999999987765 8899999999999999999988864
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=2.6e-33 Score=300.15 Aligned_cols=191 Identities=23% Similarity=0.248 Sum_probs=158.9
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEccccc--------ccchHHHHHHHHHHhcCC---------CCceeee
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKS--------RQGNREFLNEIGTISCLQ---------HPNLVKL 575 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~nIv~l 575 (732)
.++|++.+.||+|+||.||+|++ +|+.||||++.... ....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45788999999999999999988 68999999987542 223377889999988886 6666666
Q ss_pred eeeE-----------------Ee-------------CCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHH
Q 040398 576 YGCC-----------------IE-------------GDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIAR 625 (732)
Q Consensus 576 ~~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 625 (732)
.+.+ .+ ++..++||||+++|++.+.+.. ..+++..++.++.||+.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHHH
Confidence 5543 32 6789999999999977766622 45799999999999999
Q ss_pred HHHHHH-hCCCCceEeCCCCCCCeEEcCCC--------------------CeEEEeeecceeCCccCceeeecccCcccc
Q 040398 626 GLAFLH-EESRFKIVHRDIKATNVLLDRDL--------------------NPKISDFGLAKLDEEEKTHISTRVAGTIGY 684 (732)
Q Consensus 626 aL~yLH-~~~~~~iiH~Dlkp~NILl~~~~--------------------~~kL~DfGla~~~~~~~~~~~~~~~gt~~y 684 (732)
||+||| +.+ |+||||||+|||++.++ .+||+|||+|+..... ..+||+.|
T Consensus 173 aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y 243 (336)
T 2vuw_A 173 SLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVS 243 (336)
T ss_dssp HHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCT
T ss_pred HHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecc
Confidence 999999 886 99999999999999887 8999999999865431 23699999
Q ss_pred ccchhcccCCCCCchhHHHHHHH-HHHHHcCCCCCC
Q 040398 685 MAPEYALWGYLTYKADVYSFGVV-ALEIVSGKNNMS 719 (732)
Q Consensus 685 ~APE~~~~~~~~~k~DvwSlGvl-l~elltG~~P~~ 719 (732)
+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 244 ~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 244 MDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp TCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred cChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 9999998766 889999998777 788999999985
No 249
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=5.3e-32 Score=287.16 Aligned_cols=199 Identities=25% Similarity=0.436 Sum_probs=151.3
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc-cc-hHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR-QG-NREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~-~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
.++|++.+.||+|+||.||+|++. +|+.||||++..... .. .+.+.++..+++.++||||+++++++.+++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 567889999999999999999986 789999999875432 22 233445556788889999999999999999999999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC-CCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE-SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
||+ ++.+...... ....+++..+..++.||++||+|||++ + ++||||||+||+++.++.+||+|||++....
T Consensus 104 e~~-~~~~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKR---MQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHH---HTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHH---hccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 4555554421 234689999999999999999999985 5 9999999999999999999999999987554
Q ss_pred ccCceeeecccCccccccchhcc-----cCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYAL-----WGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
... ......|++.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 231 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN 231 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence 322 223456899999999984 55788999999999999999999999975
No 250
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.97 E-value=9e-32 Score=297.78 Aligned_cols=198 Identities=25% Similarity=0.340 Sum_probs=157.4
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEEEEEe
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLMLVYEY 591 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~ 591 (732)
..+|+..+.||+|+||.||.....+|+.||||++...... .+.+|+++++.+ +||||+++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 4468888999999999876555567899999998654332 346799999999 799999999999999999999999
Q ss_pred cCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC-----CCCeEEEeeeccee
Q 040398 592 LENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR-----DLNPKISDFGLAKL 666 (732)
Q Consensus 592 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~-----~~~~kL~DfGla~~ 666 (732)
++ |+|.+++.... ....+..+..++.||++||+|||+.+ |+||||||+|||++. ...+||+|||+++.
T Consensus 100 ~~-g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~ 172 (432)
T 3p23_A 100 CA-ATLQEYVEQKD---FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172 (432)
T ss_dssp CS-EEHHHHHHSSS---CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEEC
T ss_pred CC-CCHHHHHHhcC---CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceee
Confidence 96 59999986433 23344456789999999999999996 999999999999953 23588999999986
Q ss_pred CCccCc--eeeecccCccccccchhcc---cCCCCCchhHHHHHHHHHHHHc-CCCCCCC
Q 040398 667 DEEEKT--HISTRVAGTIGYMAPEYAL---WGYLTYKADVYSFGVVALEIVS-GKNNMSY 720 (732)
Q Consensus 667 ~~~~~~--~~~~~~~gt~~y~APE~~~---~~~~~~k~DvwSlGvll~ellt-G~~P~~~ 720 (732)
...... .......||+.|+|||++. ...++.++|||||||++|||+| |+.||..
T Consensus 173 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 173 LAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp C------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred ccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 543321 2233467999999999987 4567889999999999999999 9999964
No 251
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.97 E-value=3.2e-32 Score=311.43 Aligned_cols=202 Identities=29% Similarity=0.414 Sum_probs=172.2
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccc-cccchHHHHHHHHHHhcCCCCceeeeeeeEEe------CCE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSK-SRQGNREFLNEIGTISCLQHPNLVKLYGCCIE------GDQ 584 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~ 584 (732)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 468999999999999999999875 6899999998764 33445778999999999999999999998765 667
Q ss_pred EEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCC---eEEEee
Q 040398 585 LMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLN---PKISDF 661 (732)
Q Consensus 585 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~---~kL~Df 661 (732)
.++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~-~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSS-CTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccc
Confidence 899999999999999996532 2335888999999999999999999986 999999999999997765 899999
Q ss_pred ecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 662 GLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 662 Gla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
|.+....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 169 G~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 169 GYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp CCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 9998654432 22346799999999999999999999999999999999999999953
No 252
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.97 E-value=1e-30 Score=273.40 Aligned_cols=173 Identities=10% Similarity=0.056 Sum_probs=151.1
Q ss_pred hCCCcccceecccCceEEEEEEEc-CCeEEEEEEcccccc---cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR---QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 588 (732)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ...+.+.+|++++.+++||||+++++++.+++..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999986 589999999976532 2347789999999999999999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||+++++|.+++... .....+.+++.||++||+|||+++ |+||||||+|||+++++.+||+++
T Consensus 110 ~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~------- 173 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYP------- 173 (286)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSC-------
T ss_pred EEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEec-------
Confidence 9999999999998421 245578899999999999999996 999999999999999999998743
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSYVP 722 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~~~ 722 (732)
+|++| ++.++|||||||++|||+||+.||....
T Consensus 174 --------------~~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~ 206 (286)
T 3uqc_A 174 --------------ATMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAG 206 (286)
T ss_dssp --------------CCCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred --------------cccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 34443 6889999999999999999999997543
No 253
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=5.2e-30 Score=286.10 Aligned_cols=246 Identities=15% Similarity=0.177 Sum_probs=166.7
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCcccc-Ccccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCc
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSI-PREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPR 82 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 82 (732)
+.+..|..|.++++|++|+|++|.+.+.+ |..|..+ +|++|+|++|++++..|..|+++++|++|+|++|++++.+|.
T Consensus 42 i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 121 (455)
T 3v47_A 42 IAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLS 121 (455)
T ss_dssp CCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHH
T ss_pred cCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccC
Confidence 45555777788888888888888776444 4556666 688888888888766777788888888888888887765554
Q ss_pred c--ccCCCCCCEEeCCCCcccccCCcc-ccCCCCCCEEEccCccccccCCccccCC------------------------
Q 040398 83 E--LGNLVNLETLRLSSNRLIGNLPME-LVKLKNLTDFRINDNNFNGSAPDFIQSW------------------------ 135 (732)
Q Consensus 83 ~--l~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~p~~~~~l------------------------ 135 (732)
. +.++++|++|+|++|++++..|.. +.++++|+.|++++|++++..+..+..+
T Consensus 122 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~ 201 (455)
T 3v47_A 122 GNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLG 201 (455)
T ss_dssp SSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTT
T ss_pred cccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcc
Confidence 4 777778888888888887666655 6777888888888887776665544332
Q ss_pred ----------C---------------------------------------------------------------CCCEEE
Q 040398 136 ----------T---------------------------------------------------------------QLNRLE 142 (732)
Q Consensus 136 ----------~---------------------------------------------------------------~L~~L~ 142 (732)
+ +|+.|+
T Consensus 202 ~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ 281 (455)
T 3v47_A 202 WEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCD 281 (455)
T ss_dssp HHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEE
T ss_pred ccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEE
Confidence 2 344444
Q ss_pred cccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcc
Q 040398 143 IQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTG 222 (732)
Q Consensus 143 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 222 (732)
+++|.+++..|..+..+++|+.|+|++|.+.+..+..|..+++|++|+|++|++++..|..+..+++|+.|+|++|++++
T Consensus 282 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 361 (455)
T 3v47_A 282 LSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE
T ss_pred ecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc
Confidence 44444444455556666666666666666666666666666666666666666665556666666666666666666666
Q ss_pred cCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCC
Q 040398 223 ELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 223 ~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~ 264 (732)
.+|.. +.++++|+.|+|++|+|++.++.
T Consensus 362 ~~~~~--------------~~~l~~L~~L~L~~N~l~~~~~~ 389 (455)
T 3v47_A 362 LGDQS--------------FLGLPNLKELALDTNQLKSVPDG 389 (455)
T ss_dssp ECTTT--------------TTTCTTCCEEECCSSCCSCCCTT
T ss_pred cChhh--------------ccccccccEEECCCCccccCCHh
Confidence 55543 55566777777777777766654
No 254
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=9.9e-31 Score=288.13 Aligned_cols=199 Identities=15% Similarity=0.150 Sum_probs=154.4
Q ss_pred CCCcccceecccCceEEEEEEEc-CCeEEEEEEccccc---ccchHHHHHHHHHHhcCCC-Cceee--------------
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQH-PNLVK-------------- 574 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H-~nIv~-------------- 574 (732)
..|...+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++| +|...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 34667789999999999999965 79999999987432 2336789999999999987 32211
Q ss_pred -e------eeeEEe-----CCEEEEEEEecCCCchhHHhhcC---CCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceE
Q 040398 575 -L------YGCCIE-----GDQLMLVYEYLENNSLAHALFGG---ENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIV 639 (732)
Q Consensus 575 -l------~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~ii 639 (732)
+ ..++.. ....+++|+++ +++|.+++... ......+++..+..++.||++||+|||+++ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 1 111111 12356777765 67999887321 223456889999999999999999999996 99
Q ss_pred eCCCCCCCeEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhc----------ccCCCCCchhHHHHHHHHH
Q 040398 640 HRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYA----------LWGYLTYKADVYSFGVVAL 709 (732)
Q Consensus 640 H~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~----------~~~~~~~k~DvwSlGvll~ 709 (732)
||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999998865432 334567 999999999 5556888999999999999
Q ss_pred HHHcCCCCCCCC
Q 040398 710 EIVSGKNNMSYV 721 (732)
Q Consensus 710 elltG~~P~~~~ 721 (732)
||+||+.||...
T Consensus 309 elltg~~Pf~~~ 320 (413)
T 3dzo_A 309 WIWCADLPNTDD 320 (413)
T ss_dssp HHHHSSCCCCTT
T ss_pred HHHHCCCCCCCc
Confidence 999999999753
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.97 E-value=8.8e-31 Score=304.48 Aligned_cols=223 Identities=18% Similarity=0.205 Sum_probs=179.9
Q ss_pred cCccccCcccccc-ccceEeccccccccc-----------------CCcccc--CCCCCCEEecccccCCccCCccccCC
Q 040398 28 YLHGSIPREWASM-QLKYISVFANRLSGN-----------------IPSHLG--NITSLTYLDLEENQFSGTIPRELGNL 87 (732)
Q Consensus 28 ~l~~~~p~~~~~~-~L~~L~L~~n~l~~~-----------------~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~l~~l 87 (732)
++++ +|..++.+ +|++|+|++|++++. +|..++ ++++|++|+|++|++.+.+|..++++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 3444 78888888 799999999999975 899988 99999999999999998999999999
Q ss_pred CCCCEEeCCCCc-ccc-cCCccccCC------CCCCEEEccCccccccCCc--cccCCCCCCEEEcccCCCcCcCCcccc
Q 040398 88 VNLETLRLSSNR-LIG-NLPMELVKL------KNLTDFRINDNNFNGSAPD--FIQSWTQLNRLEIQGSGLEGPIPPSIS 157 (732)
Q Consensus 88 ~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 157 (732)
++|++|+|++|+ ++| .+|..++++ ++|+.|++++|+++ .+|. .++++++|+.|+|++|+++|.+| .+.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 888 888888876 89999999999998 7888 89999999999999999998888 888
Q ss_pred CccCCCeeeccCcCCCCCCcccccCCCC-ccEEEcccccccCCcchhhcCCC--CCcEEeCCCCcCcccCCCCCccCcch
Q 040398 158 ALDKLNQLRISDLQGPNQTFPMLRNMTG-LTRIILRNCNIAGEIPEYIWGIK--NLRFLDLSFNQLTGELPDVAVPADLK 234 (732)
Q Consensus 158 ~l~~L~~L~ls~N~l~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~g~~p~~~~~~~l~ 234 (732)
.+++|+.|++++|.+.. .+..+..+++ |++|+|++|+++ .+|..+..++ +|+.|+|++|++++.+|....+....
T Consensus 351 ~l~~L~~L~L~~N~l~~-lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 351 SEIKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp EEEEESEEECCSSEEEE-CCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred CCCCCCEEECCCCcccc-ccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 89999999999998884 3445888888 999999999998 7888777654 89999999999998887653210000
Q ss_pred hhHHHHHHhccCCCCeEEccCCcCcCCC
Q 040398 235 FTQILMFIRGVYEHQSLDLSYNNFTWQS 262 (732)
Q Consensus 235 ~~~~~~~~~~l~~L~~LdLs~N~l~~~~ 262 (732)
...+.+|+.|+|++|+++..+
T Consensus 429 -------~~~~~~L~~L~Ls~N~l~~lp 449 (636)
T 4eco_A 429 -------PFKGINVSSINLSNNQISKFP 449 (636)
T ss_dssp -------CCCCCCEEEEECCSSCCCSCC
T ss_pred -------cccCCCCCEEECcCCccCcCC
Confidence 003345566666666666433
No 256
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=1e-29 Score=283.67 Aligned_cols=245 Identities=18% Similarity=0.212 Sum_probs=208.2
Q ss_pred cccC-CccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCcc--ccCCCCCCEEecccccCCccCC
Q 040398 6 PGTL-PPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSH--LGNITSLTYLDLEENQFSGTIP 81 (732)
Q Consensus 6 ~g~l-P~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~p 81 (732)
.+.+ |..|.++++|++|+|++|++++..|..+..+ +|++|+|++|++++.+|.. ++.+++|++|+|++|++++..|
T Consensus 67 ~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 146 (455)
T 3v47_A 67 GLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQP 146 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCC
T ss_pred cceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCc
Confidence 3455 4578889999999999999988888888888 7999999999988755554 8888999999999999887667
Q ss_pred cc-ccCCCCCCEEeCCCCcccccCCccccCC-------------------------------------------------
Q 040398 82 RE-LGNLVNLETLRLSSNRLIGNLPMELVKL------------------------------------------------- 111 (732)
Q Consensus 82 ~~-l~~l~~L~~L~L~~N~l~~~~p~~l~~l------------------------------------------------- 111 (732)
.. +.++++|++|+|++|++++..|..+..+
T Consensus 147 ~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~ 226 (455)
T 3v47_A 147 ASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKE 226 (455)
T ss_dssp CGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCH
T ss_pred ccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccc
Confidence 65 7888888888888888886666544332
Q ss_pred ------------------------------------------------CCCCEEEccCccccccCCccccCCCCCCEEEc
Q 040398 112 ------------------------------------------------KNLTDFRINDNNFNGSAPDFIQSWTQLNRLEI 143 (732)
Q Consensus 112 ------------------------------------------------~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 143 (732)
++|+.|++++|.+++.+|..+..+++|+.|+|
T Consensus 227 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 306 (455)
T 3v47_A 227 SMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTL 306 (455)
T ss_dssp HHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEEC
Confidence 35666666666666677888999999999999
Q ss_pred ccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc
Q 040398 144 QGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 144 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
++|++++..|..+..+++|+.|+|++|.+....+..|..+++|++|+|++|++++..|..+..+++|+.|+|++|+|++.
T Consensus 307 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 307 AQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC
Confidence 99999988899999999999999999999999999999999999999999999988899999999999999999999976
Q ss_pred CCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCC
Q 040398 224 LPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 224 ~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~ 264 (732)
++.. +..+++|+.|+|++|++++..|.
T Consensus 387 ~~~~--------------~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 387 PDGI--------------FDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CTTT--------------TTTCTTCCEEECCSSCBCCCTTT
T ss_pred CHhH--------------hccCCcccEEEccCCCcccCCCc
Confidence 5543 56778999999999999977664
No 257
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=1.4e-29 Score=266.63 Aligned_cols=175 Identities=22% Similarity=0.306 Sum_probs=150.8
Q ss_pred hCCCccc-ceecccCceEEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHH-hcCCCCceeeeeeeEEe----CCEE
Q 040398 513 TSNFDPM-NKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTI-SCLQHPNLVKLYGCCIE----GDQL 585 (732)
Q Consensus 513 ~~~f~~~-~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~----~~~~ 585 (732)
.++|.+. +.||+|+||.||+|+.. +++.||+|++.. ...+.+|++++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 4567777 78999999999999875 789999999863 24567888887 66699999999999987 6778
Q ss_pred EEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcC---CCCeEEEeee
Q 040398 586 MLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDR---DLNPKISDFG 662 (732)
Q Consensus 586 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~---~~~~kL~DfG 662 (732)
++||||+++++|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDR--GDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 9999999999999999643 2236899999999999999999999996 999999999999998 7889999999
Q ss_pred cceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCCC
Q 040398 663 LAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMSY 720 (732)
Q Consensus 663 la~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~~ 720 (732)
++.... +..++.++|||||||++|||++|+.||..
T Consensus 166 ~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~ 200 (299)
T 3m2w_A 166 FAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYS 200 (299)
T ss_dssp TCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 986432 13467789999999999999999999964
No 258
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=3.9e-30 Score=299.04 Aligned_cols=244 Identities=16% Similarity=0.215 Sum_probs=216.5
Q ss_pred CCcccCCccCCCCCCCCEEEcccCcCccc-----------------cCcccc--cc-ccceEecccccccccCCccccCC
Q 040398 4 SLPGTLPPQIVNLPYLETVDFAYNYLHGS-----------------IPREWA--SM-QLKYISVFANRLSGNIPSHLGNI 63 (732)
Q Consensus 4 ~~~g~lP~~l~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~~-~L~~L~L~~n~l~~~~p~~l~~l 63 (732)
.++| ||++++++++|++|+|++|.+++. +|..+. .+ +|++|+|++|++.+.+|..++++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 5678 999999999999999999999985 999988 88 89999999999999999999999
Q ss_pred CCCCEEeccccc-CCc-cCCccccCC------CCCCEEeCCCCcccccCCc--cccCCCCCCEEEccCccccccCCcccc
Q 040398 64 TSLTYLDLEENQ-FSG-TIPRELGNL------VNLETLRLSSNRLIGNLPM--ELVKLKNLTDFRINDNNFNGSAPDFIQ 133 (732)
Q Consensus 64 ~~L~~L~Ls~N~-l~~-~~p~~l~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~~~ 133 (732)
++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .+.++++|+.|++++|+++|.+| .+.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~ 350 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFG 350 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhC
Confidence 999999999998 998 899988876 99999999999999 8998 89999999999999999999999 899
Q ss_pred CCCCCCEEEcccCCCcCcCCccccCccC-CCeeeccCcCCCCCCcccccCCC--CccEEEcccccccCCcchhhc-----
Q 040398 134 SWTQLNRLEIQGSGLEGPIPPSISALDK-LNQLRISDLQGPNQTFPMLRNMT--GLTRIILRNCNIAGEIPEYIW----- 205 (732)
Q Consensus 134 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~ls~N~l~~~~~~~l~~l~--~L~~L~Ls~N~l~~~~p~~l~----- 205 (732)
.+++|+.|+|++|+++ .+|..+..+++ |+.|++++|.++.++ ..+..++ +|++|+|++|++++.+|..+.
T Consensus 351 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~ 428 (636)
T 4eco_A 351 SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKYIP-NIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPT 428 (636)
T ss_dssp EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSSCC-SCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSS
T ss_pred CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcccc-hhhhhcccCccCEEECcCCcCCCcchhhhcccccc
Confidence 9999999999999999 88999999999 999999999999544 4555544 899999999999999998888
Q ss_pred --CCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCCCc
Q 040398 206 --GIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQP 266 (732)
Q Consensus 206 --~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~ 266 (732)
.+++|+.|+|++|+++ .+|.. .+..+++|+.|+|++|+++..++...
T Consensus 429 ~~~~~~L~~L~Ls~N~l~-~lp~~-------------~~~~l~~L~~L~Ls~N~l~~i~~~~~ 477 (636)
T 4eco_A 429 PFKGINVSSINLSNNQIS-KFPKE-------------LFSTGSPLSSINLMGNMLTEIPKNSL 477 (636)
T ss_dssp CCCCCCEEEEECCSSCCC-SCCTH-------------HHHTTCCCSEEECCSSCCSBCCSSSS
T ss_pred cccCCCCCEEECcCCccC-cCCHH-------------HHccCCCCCEEECCCCCCCCcCHHHh
Confidence 7889999999999999 44532 24567888899999999885554433
No 259
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=4.5e-29 Score=280.35 Aligned_cols=216 Identities=20% Similarity=0.265 Sum_probs=108.3
Q ss_pred CccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCC
Q 040398 10 PPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLV 88 (732)
Q Consensus 10 P~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 88 (732)
|..|.++++|++|+|++|.+++..|..|..+ +|++|+|++|++++..+..|.++++|++|+|++|++++..|..|..++
T Consensus 49 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 128 (477)
T 2id5_A 49 QDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLY 128 (477)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred HhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccc
Confidence 3445555555555555555554445555554 455555555555533233445555555555555555544444555555
Q ss_pred CCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeecc
Q 040398 89 NLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRIS 168 (732)
Q Consensus 89 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 168 (732)
+|++|+|++|++++..|..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+++..+..+..+++|+.|+++
T Consensus 129 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~ 208 (477)
T 2id5_A 129 NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEIS 208 (477)
T ss_dssp TCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEE
T ss_pred cCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCC
Confidence 55555555555554445555555555555555555554444445555555555555555554444444444444444444
Q ss_pred CcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCC
Q 040398 169 DLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELP 225 (732)
Q Consensus 169 ~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 225 (732)
+|......+.......+|++|+|++|++++..+..+..+++|+.|+|++|++++..+
T Consensus 209 ~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 265 (477)
T 2id5_A 209 HWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEG 265 (477)
T ss_dssp CCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccCh
Confidence 433222222211222244444445555553333455556666666666666664444
No 260
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=7e-29 Score=264.73 Aligned_cols=225 Identities=23% Similarity=0.324 Sum_probs=204.0
Q ss_pred CCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEe
Q 040398 16 LPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLR 94 (732)
Q Consensus 16 l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 94 (732)
.++++.|+|++|+++ .+|..+..+ +|++|+|++|+++ .+|..++++++|++|+|++|+++ .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 478999999999999 788877777 7999999999999 89999999999999999999999 8899999999999999
Q ss_pred CCCCcccccCCccccC---------CCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCee
Q 040398 95 LSSNRLIGNLPMELVK---------LKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQL 165 (732)
Q Consensus 95 L~~N~l~~~~p~~l~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 165 (732)
|++|++.+.+|..+.. +++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEE
Confidence 9999888888887765 999999999999998 88888999999999999999999 467789999999999
Q ss_pred eccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhcc
Q 040398 166 RISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGV 245 (732)
Q Consensus 166 ~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l 245 (732)
+|++|.+.+..+..+..+++|++|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|+. ++++
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~--------------l~~L 300 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL--------------IAQL 300 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGG--------------GGGS
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHH--------------Hhhc
Confidence 99999999888888999999999999999999999999999999999999999999999976 7788
Q ss_pred CCCCeEEccCCcCc
Q 040398 246 YEHQSLDLSYNNFT 259 (732)
Q Consensus 246 ~~L~~LdLs~N~l~ 259 (732)
++|+.++++.|.+.
T Consensus 301 ~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 301 PANCIILVPPHLQA 314 (328)
T ss_dssp CTTCEEECCGGGSC
T ss_pred cCceEEeCCHHHHH
Confidence 89999999888664
No 261
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=3e-29 Score=297.49 Aligned_cols=256 Identities=18% Similarity=0.218 Sum_probs=209.8
Q ss_pred CCcccCCccCCCCCCCCEEEc-ccCcCccc--------------------------------------------------
Q 040398 4 SLPGTLPPQIVNLPYLETVDF-AYNYLHGS-------------------------------------------------- 32 (732)
Q Consensus 4 ~~~g~lP~~l~~l~~L~~L~L-s~N~l~~~-------------------------------------------------- 32 (732)
++.|.+|++|++|++|++|+| ++|.+.|.
T Consensus 334 ~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~ 413 (876)
T 4ecn_A 334 GAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPE 413 (876)
T ss_dssp CCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTT
T ss_pred CCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcc
Confidence 578999999999999999999 77755443
Q ss_pred --------------------------cCcccccc-ccceEecccccccc-----------------cCCcccc--CCCCC
Q 040398 33 --------------------------IPREWASM-QLKYISVFANRLSG-----------------NIPSHLG--NITSL 66 (732)
Q Consensus 33 --------------------------~p~~~~~~-~L~~L~L~~n~l~~-----------------~~p~~l~--~l~~L 66 (732)
+|..+..+ +|++|+|++|+|++ .+|..++ ++++|
T Consensus 414 ~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L 493 (876)
T 4ecn_A 414 MKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDL 493 (876)
T ss_dssp SCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred ccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCC
Confidence 77888888 79999999999997 3899988 99999
Q ss_pred CEEecccccCCccCCccccCCCCCCEEeCCCCc-ccc-cCCccccCCC-------CCCEEEccCccccccCCc--cccCC
Q 040398 67 TYLDLEENQFSGTIPRELGNLVNLETLRLSSNR-LIG-NLPMELVKLK-------NLTDFRINDNNFNGSAPD--FIQSW 135 (732)
Q Consensus 67 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~p~--~~~~l 135 (732)
++|+|++|++.+.+|..|+++++|+.|+|++|+ +++ .+|..+.+++ +|+.|+|++|+++ .+|. .++++
T Consensus 494 ~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L 572 (876)
T 4ecn_A 494 TDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKM 572 (876)
T ss_dssp CEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC
T ss_pred CEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcC
Confidence 999999999999999999999999999999998 888 7888776665 9999999999999 8888 89999
Q ss_pred CCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCC-ccEEEcccccccCCcchhhcCCCC--CcE
Q 040398 136 TQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTG-LTRIILRNCNIAGEIPEYIWGIKN--LRF 212 (732)
Q Consensus 136 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~--L~~ 212 (732)
++|+.|+|++|+++ .+| .+..+++|+.|+|++|.+. ..+..+..+++ |+.|+|++|+|+ .+|..+..++. |+.
T Consensus 573 ~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~ 648 (876)
T 4ecn_A 573 VKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGS 648 (876)
T ss_dssp TTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEE
T ss_pred CCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCE
Confidence 99999999999998 888 8999999999999999998 44456888888 999999999998 78888777654 999
Q ss_pred EeCCCCcCcccCCCCCc------cCcch--------hhHHHH-HHhccCCCCeEEccCCcCcCCCCC
Q 040398 213 LDLSFNQLTGELPDVAV------PADLK--------FTQILM-FIRGVYEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 213 L~Ls~N~l~g~~p~~~~------~~~l~--------~~~~~~-~~~~l~~L~~LdLs~N~l~~~~p~ 264 (732)
|+|++|+++|.+|.... ..++. +..++. .+..+++|+.|+|++|+|+..++.
T Consensus 649 L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~ 715 (876)
T 4ecn_A 649 VDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPEN 715 (876)
T ss_dssp EECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTT
T ss_pred EECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChH
Confidence 99999999988774320 00111 112232 234677788888888888744443
No 262
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=7.6e-29 Score=261.77 Aligned_cols=230 Identities=20% Similarity=0.212 Sum_probs=204.4
Q ss_pred CCCCEEEcccCcCccccCcccccc-ccceEecccccccc--cCCccccCCCCCCEEecccccCCccCCccccCCCCCCEE
Q 040398 17 PYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSG--NIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETL 93 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 93 (732)
++|++|+|++|+++...+..+..+ +|++|+|++|+++. ..|..+..+++|++|+|++|.++ .+|..+..+++|++|
T Consensus 28 ~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L 106 (306)
T 2z66_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHL 106 (306)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEE
Confidence 579999999999995444557777 89999999999983 33677888999999999999998 688889999999999
Q ss_pred eCCCCcccccCC-ccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcC-cCCccccCccCCCeeeccCcC
Q 040398 94 RLSSNRLIGNLP-MELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEG-PIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 94 ~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~N~ 171 (732)
+|++|++++..+ ..+..+++|+.|++++|.+.+..+..+..+++|+.|+|++|.+++ .+|..+..+++|+.|++++|.
T Consensus 107 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 186 (306)
T 2z66_A 107 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 186 (306)
T ss_dssp ECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred ECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCC
Confidence 999999995544 578999999999999999998889999999999999999999987 578999999999999999999
Q ss_pred CCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhcc-CCCCe
Q 040398 172 GPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGV-YEHQS 250 (732)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l-~~L~~ 250 (732)
+....+..+..+++|++|+|++|++++..+..+..+++|+.|+|++|++++.+|.. +..+ ++|+.
T Consensus 187 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--------------~~~~~~~L~~ 252 (306)
T 2z66_A 187 LEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQE--------------LQHFPSSLAF 252 (306)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSS--------------CCCCCTTCCE
T ss_pred cCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHH--------------HHhhhccCCE
Confidence 99998889999999999999999999877778999999999999999999988865 4445 48999
Q ss_pred EEccCCcCcCC
Q 040398 251 LDLSYNNFTWQ 261 (732)
Q Consensus 251 LdLs~N~l~~~ 261 (732)
|+|++|++++.
T Consensus 253 L~L~~N~~~~~ 263 (306)
T 2z66_A 253 LNLTQNDFACT 263 (306)
T ss_dssp EECTTCCEECS
T ss_pred EEccCCCeecc
Confidence 99999998754
No 263
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=7.7e-28 Score=256.90 Aligned_cols=228 Identities=18% Similarity=0.264 Sum_probs=193.1
Q ss_pred CCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeC
Q 040398 17 PYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRL 95 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 95 (732)
+.|++|+|++|++++..+..+..+ +|++|+|++|++++..|..++++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 578899999999997767678877 7999999999999777888999999999999999988 6777665 78999999
Q ss_pred CCCcccccCCccccCCCCCCEEEccCcccc--ccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCC
Q 040398 96 SSNRLIGNLPMELVKLKNLTDFRINDNNFN--GSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGP 173 (732)
Q Consensus 96 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 173 (732)
++|++++..+..+.++++|+.|++++|.+. +..+..+..+++|+.|++++|.++ .+|..+. ++|+.|++++|.+.
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~ 205 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKIT 205 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCC
Confidence 999998766777888999999999999985 367788889999999999999988 4665554 78999999999998
Q ss_pred CCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEc
Q 040398 174 NQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDL 253 (732)
Q Consensus 174 ~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdL 253 (732)
...+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+++ .+|.. +..+++|+.|+|
T Consensus 206 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~--------------l~~l~~L~~L~l 270 (330)
T 1xku_A 206 KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG--------------LADHKYIQVVYL 270 (330)
T ss_dssp EECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTT--------------TTTCSSCCEEEC
T ss_pred ccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChh--------------hccCCCcCEEEC
Confidence 888888999999999999999999777778888999999999999998 55554 556788999999
Q ss_pred cCCcCcCCCCCC
Q 040398 254 SYNNFTWQSPEQ 265 (732)
Q Consensus 254 s~N~l~~~~p~~ 265 (732)
++|+|++.++..
T Consensus 271 ~~N~i~~~~~~~ 282 (330)
T 1xku_A 271 HNNNISAIGSND 282 (330)
T ss_dssp CSSCCCCCCTTS
T ss_pred CCCcCCccChhh
Confidence 999998776653
No 264
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=5.2e-28 Score=269.81 Aligned_cols=227 Identities=15% Similarity=0.186 Sum_probs=170.9
Q ss_pred CCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeC
Q 040398 17 PYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRL 95 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 95 (732)
++|++|+|++|++++..|..|..+ +|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 467888888888887777777777 6888888888888666777888888888888888887555556777888888888
Q ss_pred CCCcccccCCccccCCCCCCEEEccCc-cccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCC
Q 040398 96 SSNRLIGNLPMELVKLKNLTDFRINDN-NFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPN 174 (732)
Q Consensus 96 ~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 174 (732)
++|+|+...+..+.++++|+.|++++| .+....+..|..+++|+.|+|++|++++ +| .+..+++|+.|+|++|.+.+
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcc
Confidence 888887555567777888888888874 4444444567778888888888888874 33 46777788888888888888
Q ss_pred CCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEcc
Q 040398 175 QTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLS 254 (732)
Q Consensus 175 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs 254 (732)
+.+..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|+|++.++.. +..+++|+.|+|+
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--------------~~~l~~L~~L~L~ 298 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDL--------------FTPLRYLVELHLH 298 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTS--------------STTCTTCCEEECC
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHH--------------hccccCCCEEEcc
Confidence 77777888888888888888888777777778888888888888887555543 4456777888888
Q ss_pred CCcCc
Q 040398 255 YNNFT 259 (732)
Q Consensus 255 ~N~l~ 259 (732)
+|++.
T Consensus 299 ~Np~~ 303 (452)
T 3zyi_A 299 HNPWN 303 (452)
T ss_dssp SSCEE
T ss_pred CCCcC
Confidence 88654
No 265
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=6.3e-28 Score=271.00 Aligned_cols=234 Identities=20% Similarity=0.188 Sum_probs=207.8
Q ss_pred CCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeC
Q 040398 17 PYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRL 95 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 95 (732)
++|++|+|++|++++..|..|..+ +|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 579999999999998888899988 8999999999999888999999999999999999999555557899999999999
Q ss_pred CCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCC
Q 040398 96 SSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQ 175 (732)
Q Consensus 96 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 175 (732)
++|++++..|..+.++++|+.|+|++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+..+
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 99999988899999999999999999999999999999999999999999999977777899999999999999999999
Q ss_pred CcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccC
Q 040398 176 TFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSY 255 (732)
Q Consensus 176 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~ 255 (732)
....|..+++|++|+|++|.+.+.+|..+....+|+.|+|++|++++..+. .+.++++|+.|+|++
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~--------------~~~~l~~L~~L~Ls~ 257 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYL--------------AVRHLVYLRFLNLSY 257 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHH--------------HHTTCTTCCEEECCS
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHH--------------HhcCccccCeeECCC
Confidence 988999999999999999999889998888888999999999999954321 244556666666666
Q ss_pred CcCcCCCCC
Q 040398 256 NNFTWQSPE 264 (732)
Q Consensus 256 N~l~~~~p~ 264 (732)
|++++.++.
T Consensus 258 n~l~~~~~~ 266 (477)
T 2id5_A 258 NPISTIEGS 266 (477)
T ss_dssp SCCCEECTT
T ss_pred CcCCccChh
Confidence 666655543
No 266
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=7.3e-28 Score=267.66 Aligned_cols=227 Identities=15% Similarity=0.179 Sum_probs=175.1
Q ss_pred CCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeC
Q 040398 17 PYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRL 95 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 95 (732)
++++.|+|++|++++..+..|..+ +|++|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 567888888888887777777777 6888888888888666677888888888888888888544456788888888888
Q ss_pred CCCcccccCCccccCCCCCCEEEccCc-cccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCC
Q 040398 96 SSNRLIGNLPMELVKLKNLTDFRINDN-NFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPN 174 (732)
Q Consensus 96 ~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 174 (732)
++|+|+...+..|.++++|+.|+|++| .+....+..|.++++|+.|+|++|+++ .+| .+..+++|+.|+|++|.++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCc
Confidence 888888666667788888888888874 444444456788888888888888887 444 47778888888888888888
Q ss_pred CCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEcc
Q 040398 175 QTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLS 254 (732)
Q Consensus 175 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs 254 (732)
+.+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+.. +..+++|+.|+|+
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--------------~~~l~~L~~L~L~ 287 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDL--------------FTPLHHLERIHLH 287 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTT--------------TSSCTTCCEEECC
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhH--------------hccccCCCEEEcC
Confidence 87778888888888888888888777777888888888888888888655543 4566778888888
Q ss_pred CCcCc
Q 040398 255 YNNFT 259 (732)
Q Consensus 255 ~N~l~ 259 (732)
+|++.
T Consensus 288 ~Np~~ 292 (440)
T 3zyj_A 288 HNPWN 292 (440)
T ss_dssp SSCEE
T ss_pred CCCcc
Confidence 88664
No 267
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=1.1e-28 Score=292.77 Aligned_cols=263 Identities=17% Similarity=0.228 Sum_probs=209.2
Q ss_pred cCCccCC--CCCCCCEEEcccCcCccccCcccccc-ccceEeccccc-ccc-cCCccccCCC-------CCCEEeccccc
Q 040398 8 TLPPQIV--NLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANR-LSG-NIPSHLGNIT-------SLTYLDLEENQ 75 (732)
Q Consensus 8 ~lP~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~-l~~-~~p~~l~~l~-------~L~~L~Ls~N~ 75 (732)
.+|+.++ ++++|++|+|++|++.+.+|..+..+ +|++|+|++|+ +++ .+|..+++++ +|++|+|++|+
T Consensus 480 ~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~ 559 (876)
T 4ecn_A 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNN 559 (876)
T ss_dssp HTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSC
T ss_pred cCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCc
Confidence 5999998 99999999999999999999999988 89999999998 998 8888776665 99999999999
Q ss_pred CCccCCc--cccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCC-CCEEEcccCCCcCcC
Q 040398 76 FSGTIPR--ELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQ-LNRLEIQGSGLEGPI 152 (732)
Q Consensus 76 l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~ 152 (732)
|+ .+|. .++++++|+.|+|++|+|+ .+| .+..+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+
T Consensus 560 L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~l 634 (876)
T 4ecn_A 560 LE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YI 634 (876)
T ss_dssp CC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SC
T ss_pred CC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cC
Confidence 99 8998 8999999999999999999 888 8999999999999999999 88989999999 999999999999 88
Q ss_pred CccccCccC--CCeeeccCcCCCCCCccc---cc--CCCCccEEEcccccccCCcchhh-cCCCCCcEEeCCCCcCcccC
Q 040398 153 PPSISALDK--LNQLRISDLQGPNQTFPM---LR--NMTGLTRIILRNCNIAGEIPEYI-WGIKNLRFLDLSFNQLTGEL 224 (732)
Q Consensus 153 p~~~~~l~~--L~~L~ls~N~l~~~~~~~---l~--~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~g~~ 224 (732)
|..+..++. |+.|+|++|.+.+..+.. +. .+++|+.|+|++|+|+ .+|..+ ..+++|+.|+|++|+|+ .+
T Consensus 635 p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~i 712 (876)
T 4ecn_A 635 PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SI 712 (876)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CC
T ss_pred chhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-cc
Confidence 888877754 999999999998754422 22 3458999999999998 566554 47899999999999998 55
Q ss_pred CCCCccC---------cch--------hhHHHHHHh--ccCCCCeEEccCCcCcCCCCCCccccCCCCcccc
Q 040398 225 PDVAVPA---------DLK--------FTQILMFIR--GVYEHQSLDLSYNNFTWQSPEQPACREKPNLNLN 277 (732)
Q Consensus 225 p~~~~~~---------~l~--------~~~~~~~~~--~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~~~ 277 (732)
|...... .+. +..++..+. .+++|+.|+|++|+|++.++....+..+..|++.
T Consensus 713 p~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls 784 (876)
T 4ecn_A 713 PENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIR 784 (876)
T ss_dssp CTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECC
T ss_pred ChHHhccccccccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECC
Confidence 5532210 111 112233343 5666666666666666644444444444444443
No 268
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=2.4e-27 Score=253.31 Aligned_cols=232 Identities=22% Similarity=0.280 Sum_probs=176.3
Q ss_pred CCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCC
Q 040398 9 LPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNL 87 (732)
Q Consensus 9 lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 87 (732)
+|..+. ++|++|+|++|.+++..|..+..+ +|++|+|++|++++..|..++++++|++|+|++|+++ .+|..+.
T Consensus 48 ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~-- 122 (332)
T 2ft3_A 48 VPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP-- 122 (332)
T ss_dssp CCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--
T ss_pred cCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--
Confidence 444442 567778888777776666677766 6788888888777666777777788888888887777 6666555
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCCEEEccCcccc--ccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCee
Q 040398 88 VNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFN--GSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQL 165 (732)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 165 (732)
++|++|++++|++++..+..+..+++|+.|++++|.++ +..+..+..+ +|+.|++++|++++ +|..+. ++|+.|
T Consensus 123 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L 198 (332)
T 2ft3_A 123 SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNEL 198 (332)
T ss_dssp TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCC
T ss_pred ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEE
Confidence 67788888888777555556777788888888888774 3566667766 77777888877774 555443 688888
Q ss_pred eccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhcc
Q 040398 166 RISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGV 245 (732)
Q Consensus 166 ~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l 245 (732)
++++|.+....+..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|.. +..+
T Consensus 199 ~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~--------------l~~l 263 (332)
T 2ft3_A 199 HLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG--------------LPDL 263 (332)
T ss_dssp BCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT--------------GGGC
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh--------------hhcC
Confidence 88888888888888888888999999999988777778888889999999999888 55653 5677
Q ss_pred CCCCeEEccCCcCcCCCCC
Q 040398 246 YEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 246 ~~L~~LdLs~N~l~~~~p~ 264 (732)
++|+.|+|++|+|++.++.
T Consensus 264 ~~L~~L~l~~N~l~~~~~~ 282 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKVGVN 282 (332)
T ss_dssp TTCCEEECCSSCCCBCCTT
T ss_pred ccCCEEECCCCCCCccChh
Confidence 8889999999999877665
No 269
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=6.1e-28 Score=279.42 Aligned_cols=245 Identities=20% Similarity=0.201 Sum_probs=181.0
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCc-
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPR- 82 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~- 82 (732)
+.+..|..+.++++|++|+|++|+++ .+|..+..+ +|++|+|++|++++..|..+.++++|++|+|++|.+.+.+|.
T Consensus 266 l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 344 (606)
T 3t6q_A 266 FFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG 344 (606)
T ss_dssp CSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSS
T ss_pred cCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchh
Confidence 34444556888888888888888887 677777766 688888888888866677788888888888888887766655
Q ss_pred cccCCCCCCEEeCCCCcccccC--CccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCcc-ccCc
Q 040398 83 ELGNLVNLETLRLSSNRLIGNL--PMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPS-ISAL 159 (732)
Q Consensus 83 ~l~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l 159 (732)
.+..+++|++|++++|++++.. |..+..+++|+.|++++|++.+..|..+..+++|+.|++++|++++..+.. +..+
T Consensus 345 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l 424 (606)
T 3t6q_A 345 CLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNL 424 (606)
T ss_dssp TTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTC
T ss_pred hhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCc
Confidence 3777888888888888877554 667777888888888888877777777777888888888888877665543 7777
Q ss_pred cCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCC---cchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhh
Q 040398 160 DKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGE---IPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFT 236 (732)
Q Consensus 160 ~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~---~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~ 236 (732)
++|+.|++++|.+....+..+..+++|++|+|++|++++. .+..+..+++|+.|+|++|++++.+|..
T Consensus 425 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~--------- 495 (606)
T 3t6q_A 425 HLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHA--------- 495 (606)
T ss_dssp TTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTT---------
T ss_pred ccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhh---------
Confidence 7888888888877777777777777888888888877652 2245777777888888888777766654
Q ss_pred HHHHHHhccCCCCeEEccCCcCcCCCCC
Q 040398 237 QILMFIRGVYEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 237 ~~~~~~~~l~~L~~LdLs~N~l~~~~p~ 264 (732)
+.++++|+.|||++|++++.+|.
T Consensus 496 -----~~~l~~L~~L~Ls~N~l~~~~~~ 518 (606)
T 3t6q_A 496 -----FTSLKMMNHVDLSHNRLTSSSIE 518 (606)
T ss_dssp -----TTTCTTCCEEECCSSCCCGGGGG
T ss_pred -----hccccCCCEEECCCCccCcCChh
Confidence 45556666666666666666553
No 270
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=2e-28 Score=263.99 Aligned_cols=259 Identities=17% Similarity=0.133 Sum_probs=130.9
Q ss_pred CCCCCCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEE
Q 040398 14 VNLPYLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETL 93 (732)
Q Consensus 14 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 93 (732)
..++.....++++|.++ .+|..+.. +|++|+|++|++++..+..+.++++|++|+|++|++++..|..|.++++|++|
T Consensus 28 ~~C~~~~~c~~~~~~l~-~iP~~~~~-~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLN-SIPSGLTE-AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CEECTTSEEECCSTTCS-SCCTTCCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCeEeeCCCCCcc-cccccccc-cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 33444445555555555 34443322 45555555555553333355555555555555555554444455555555555
Q ss_pred eCCCCcccccCCccccCCCCCCEEEccCccccccCC-ccccCCCCCCEEEcccC-CCcCcCCccccCccCCCeeeccCcC
Q 040398 94 RLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAP-DFIQSWTQLNRLEIQGS-GLEGPIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 94 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~ls~N~ 171 (732)
+|++|+|++..+..+.++++|+.|++++|++++..+ ..+..+++|+.|++++| .++...+..+..+++|+.|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 555555553222225555555555555555553222 24555555555555555 2443344455555555555555555
Q ss_pred CCCCCcccccCCCCccEEEcccccccCCcch-hhcCCCCCcEEeCCCCcCcccCCCCCcc-----------------Ccc
Q 040398 172 GPNQTFPMLRNMTGLTRIILRNCNIAGEIPE-YIWGIKNLRFLDLSFNQLTGELPDVAVP-----------------ADL 233 (732)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l~g~~p~~~~~-----------------~~l 233 (732)
+.+..+..+..+++|++|+|++|+++ .+|. .+..+++|+.|+|++|.+++..+..... ...
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~ 264 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE 264 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCST-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH
T ss_pred cCccCHHHHhccccCCeecCCCCccc-cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc
Confidence 55555555555555555555555554 2332 2333555555555555555433221100 001
Q ss_pred hhhHHHHHHhccCCCCeEEccCCcCcCCCCCC-ccccCCCCcc
Q 040398 234 KFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQ-PACREKPNLN 275 (732)
Q Consensus 234 ~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~-~~~~~~~~l~ 275 (732)
....++..+.++++|+.|||++|+|+..++.. ..+..+..|+
T Consensus 265 ~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~ 307 (353)
T 2z80_A 265 SLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIW 307 (353)
T ss_dssp HHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred chhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEE
Confidence 12244555677777777777777777555543 3444444443
No 271
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=7.7e-28 Score=251.38 Aligned_cols=224 Identities=21% Similarity=0.218 Sum_probs=125.4
Q ss_pred CEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCc
Q 040398 20 ETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNR 99 (732)
Q Consensus 20 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 99 (732)
++++++++.++ .+|..+. .+|++|+|++|++++..+..|.++++|++|+|++|.+++..|..+.++++|++|+|++|.
T Consensus 14 ~~~~c~~~~l~-~ip~~~~-~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 91 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGIP-AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNA 91 (285)
T ss_dssp CEEECCSSCCS-SCCTTCC-TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCT
T ss_pred eEEEcCcCCcc-cCCcCCC-CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCC
Confidence 45555555555 3443221 145566666666654444555556666666666666554445555556666666666664
Q ss_pred -ccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcc
Q 040398 100 -LIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFP 178 (732)
Q Consensus 100 -l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 178 (732)
++...|..+..+++|+.|++++|.+++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|.++.++..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 171 (285)
T 1ozn_A 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPER 171 (285)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTT
T ss_pred CccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHH
Confidence 5433355555556666666666666555555555566666666666666544444555556666666666655555555
Q ss_pred cccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcC
Q 040398 179 MLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNF 258 (732)
Q Consensus 179 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l 258 (732)
.|..+++|++|+|++|++++..|..+..+++|+.|+|++|++++.+++ .+..+++|+.|+|++|++
T Consensus 172 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~--------------~~~~l~~L~~L~l~~N~~ 237 (285)
T 1ozn_A 172 AFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE--------------ALAPLRALQYLRLNDNPW 237 (285)
T ss_dssp TTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHH--------------HHTTCTTCCEEECCSSCE
T ss_pred HhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHH--------------HcccCcccCEEeccCCCc
Confidence 555556666666666666555555555566666666666665543322 144455556666666655
Q ss_pred c
Q 040398 259 T 259 (732)
Q Consensus 259 ~ 259 (732)
+
T Consensus 238 ~ 238 (285)
T 1ozn_A 238 V 238 (285)
T ss_dssp E
T ss_pred c
Confidence 4
No 272
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=2.5e-27 Score=274.21 Aligned_cols=234 Identities=17% Similarity=0.211 Sum_probs=135.3
Q ss_pred CCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCC
Q 040398 18 YLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLS 96 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 96 (732)
+|++|++++|.+++..+..|..+ +|++|+|++|+++ .+|..++.+++|++|+|++|.+++..|..+.++++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 45666666666665555555555 5666666666665 556566666666666666666664445556666666666666
Q ss_pred CCcccccCCcc-ccCCCCCCEEEccCccccccC--CccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCC
Q 040398 97 SNRLIGNLPME-LVKLKNLTDFRINDNNFNGSA--PDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGP 173 (732)
Q Consensus 97 ~N~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 173 (732)
+|.+.+.+|.. +..+++|+.|++++|.+++.. +..+..+++|+.|++++|++++..|..+..+++|+.|++++|.+.
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 66655444433 555666666666666665443 455566666666666666666555556666666666666666665
Q ss_pred CCCcc-cccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc-CCCCCccCcchhhHHHHHHhccCCCCeE
Q 040398 174 NQTFP-MLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE-LPDVAVPADLKFTQILMFIRGVYEHQSL 251 (732)
Q Consensus 174 ~~~~~-~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~-~p~~~~~~~l~~~~~~~~~~~l~~L~~L 251 (732)
...+. .+..+++|+.|+|++|.+++..|..+..+++|+.|+|++|++++. +|.. ..+..+++|+.|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~------------~~~~~l~~L~~L 481 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKT------------NSLQTLGRLEIL 481 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSS------------CGGGGCTTCCEE
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccc------------hhhccCCCccEE
Confidence 54433 255566666666666666655555566666666666666666542 1110 014445566666
Q ss_pred EccCCcCcCCCCC
Q 040398 252 DLSYNNFTWQSPE 264 (732)
Q Consensus 252 dLs~N~l~~~~p~ 264 (732)
+|++|++++.+|.
T Consensus 482 ~Ls~n~l~~~~~~ 494 (606)
T 3t6q_A 482 VLSFCDLSSIDQH 494 (606)
T ss_dssp ECTTSCCCEECTT
T ss_pred ECCCCccCccChh
Confidence 6666666655543
No 273
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.95 E-value=4.5e-27 Score=250.97 Aligned_cols=241 Identities=19% Similarity=0.231 Sum_probs=210.3
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCcc
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRE 83 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 83 (732)
+++..+..|.++++|++|+|++|.+++..|..+..+ +|++|+|++|+++ .+|..+. ++|++|+|++|++++..+..
T Consensus 64 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~ 140 (330)
T 1xku_A 64 ITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSV 140 (330)
T ss_dssp CCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHH
T ss_pred CCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhH
Confidence 455445589999999999999999998889999988 8999999999999 7887765 89999999999999766678
Q ss_pred ccCCCCCCEEeCCCCcccc--cCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccC
Q 040398 84 LGNLVNLETLRLSSNRLIG--NLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDK 161 (732)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 161 (732)
+.++++|+.|+|++|.++. ..+..+.++++|+.|++++|.++. +|..+. ++|+.|++++|++++..|..+..+++
T Consensus 141 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~ 217 (330)
T 1xku_A 141 FNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNN 217 (330)
T ss_dssp HTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTT
T ss_pred hcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCC
Confidence 9999999999999999963 678889999999999999999984 565543 89999999999999888999999999
Q ss_pred CCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHH
Q 040398 162 LNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMF 241 (732)
Q Consensus 162 L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~ 241 (732)
|+.|++++|.+....+..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+........
T Consensus 218 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~-------- 288 (330)
T 1xku_A 218 LAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGY-------- 288 (330)
T ss_dssp CCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSC--------
T ss_pred CCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCccc--------
Confidence 999999999999998889999999999999999999 89999999999999999999999766654221110
Q ss_pred HhccCCCCeEEccCCcCcC
Q 040398 242 IRGVYEHQSLDLSYNNFTW 260 (732)
Q Consensus 242 ~~~l~~L~~LdLs~N~l~~ 260 (732)
......++.|++++|++..
T Consensus 289 ~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 289 NTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CTTSCCCSEEECCSSSSCG
T ss_pred ccccccccceEeecCcccc
Confidence 1123678899999999864
No 274
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2e-27 Score=248.28 Aligned_cols=239 Identities=18% Similarity=0.183 Sum_probs=206.6
Q ss_pred CCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEeccccc-CCccCCccccC
Q 040398 9 LPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQ-FSGTIPRELGN 86 (732)
Q Consensus 9 lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~ 86 (732)
+|..+ .++|++|+|++|.+++..+..+..+ +|++|+|++|++++..|..+..+++|++|+|++|. ++...|..+..
T Consensus 26 ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~ 103 (285)
T 1ozn_A 26 VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHG 103 (285)
T ss_dssp CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTT
T ss_pred CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcC
Confidence 45433 3689999999999998777888888 89999999999998879999999999999999997 87555889999
Q ss_pred CCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeee
Q 040398 87 LVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLR 166 (732)
Q Consensus 87 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (732)
+++|++|+|++|++++..|..+.++++|+.|++++|++++..+..+..+++|+.|+|++|++++..+..+..+++|+.|+
T Consensus 104 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 183 (285)
T 1ozn_A 104 LGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLL 183 (285)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEE
Confidence 99999999999999987788899999999999999999987778899999999999999999977777899999999999
Q ss_pred ccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccC
Q 040398 167 ISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVY 246 (732)
Q Consensus 167 ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~ 246 (732)
+++|.+....+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++.+..+.. .+. .
T Consensus 184 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~---------~~~------~ 248 (285)
T 1ozn_A 184 LHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR---------PLW------A 248 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH---------HHH------H
T ss_pred CCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH---------HHH------H
Confidence 9999999998999999999999999999999877788999999999999999998654321 111 1
Q ss_pred CCCeEEccCCcCcCCCCC
Q 040398 247 EHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 247 ~L~~LdLs~N~l~~~~p~ 264 (732)
.++.++.+.|.+.+..|.
T Consensus 249 ~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp HHHHCCSEECCCBEEESG
T ss_pred HHHhcccccCccccCCch
Confidence 234455667777655554
No 275
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=2e-27 Score=253.41 Aligned_cols=210 Identities=20% Similarity=0.326 Sum_probs=200.0
Q ss_pred cCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccC
Q 040398 8 TLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGN 86 (732)
Q Consensus 8 ~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 86 (732)
.+|+.+.++++|++|+|++|.++ .+|..+..+ +|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+..
T Consensus 95 ~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~ 172 (328)
T 4fcg_A 95 QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS 172 (328)
T ss_dssp SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEE
T ss_pred hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhh
Confidence 68999999999999999999999 899999888 8999999999999 89999999999999999999998899988765
Q ss_pred ---------CCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCcccc
Q 040398 87 ---------LVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSIS 157 (732)
Q Consensus 87 ---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 157 (732)
+++|++|+|++|+|+ .+|..+.++++|+.|+|++|++++ +|..+..+++|+.|+|++|++.+.+|..+.
T Consensus 173 ~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~ 250 (328)
T 4fcg_A 173 TDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFG 250 (328)
T ss_dssp EC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTT
T ss_pred ccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhc
Confidence 999999999999999 899999999999999999999995 677899999999999999999999999999
Q ss_pred CccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCc
Q 040398 158 ALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLT 221 (732)
Q Consensus 158 ~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 221 (732)
.+++|+.|+|++|.+.+..+..+..+++|++|+|++|++.+.+|+.+.++++|+.+++..|.+.
T Consensus 251 ~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 251 GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 9999999999999999988889999999999999999999999999999999999999988776
No 276
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=2.3e-29 Score=287.10 Aligned_cols=185 Identities=18% Similarity=0.137 Sum_probs=129.2
Q ss_pred eecccCceEEEEEEE-cCCeEEEEEEccccc----------ccchHHHHHHHHHHhcC-CCCceeeeeeeEEeCCEEEEE
Q 040398 521 KIGEGGFGPVYKGQL-TDGTIIAVKLLSSKS----------RQGNREFLNEIGTISCL-QHPNLVKLYGCCIEGDQLMLV 588 (732)
Q Consensus 521 ~LG~G~fg~Vy~a~~-~~g~~vAvK~~~~~~----------~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 588 (732)
..+.|+.|.+..++. -.|+.||||++.... ....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 466777777776653 358899999986531 12345799999999999 799999999999999999999
Q ss_pred EEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 589 YEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 589 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
|||++|++|.+++... .+++.. +|+.||+.||+|+|++| ||||||||+|||+++++.+||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999999543 345543 58999999999999997 9999999999999999999999999998655
Q ss_pred ccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCC
Q 040398 669 EEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNN 717 (732)
Q Consensus 669 ~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P 717 (732)
.... .....+||++|||||++.+ .+..++|+||+|+++++|.++..|
T Consensus 391 ~~~~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCS-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---C-CSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCc-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 4332 2334679999999998876 456789999999998877665433
No 277
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=3.4e-27 Score=257.99 Aligned_cols=246 Identities=20% Similarity=0.192 Sum_probs=139.9
Q ss_pred CCcc-CCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCc-ccc
Q 040398 9 LPPQ-IVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPR-ELG 85 (732)
Q Consensus 9 lP~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~ 85 (732)
+|+. +.++++|++|+|++|.+++..+..+..+ +|++|+|++|++++..|..++++++|++|+|++|+++ .+|. .+.
T Consensus 60 l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~ 138 (390)
T 3o6n_A 60 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFH 138 (390)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTT
T ss_pred CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhc
Confidence 4433 4556666666666666665555556555 5666666666666555555666666666666666666 3443 345
Q ss_pred CCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCc-CCccc--------
Q 040398 86 NLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGP-IPPSI-------- 156 (732)
Q Consensus 86 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~-------- 156 (732)
++++|++|+|++|++++..|..+..+++|+.|++++|++++.. +..+++|+.|++++|.+++. .|..+
T Consensus 139 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n 215 (390)
T 3o6n_A 139 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHN 215 (390)
T ss_dssp TCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSS
T ss_pred CCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCC
Confidence 6666666666666666555555666666666666666665432 22223333322222222210 00000
Q ss_pred -------cCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCc
Q 040398 157 -------SALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAV 229 (732)
Q Consensus 157 -------~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~ 229 (732)
...++|+.|++++|.+++. ..+..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++..+.
T Consensus 216 ~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--- 290 (390)
T 3o6n_A 216 SINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLY--- 290 (390)
T ss_dssp CCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECS---
T ss_pred eeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcc---
Confidence 1124566777777776654 4677777778888888877777777777777777788877777754221
Q ss_pred cCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCCCccccCCCCcc
Q 040398 230 PADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLN 275 (732)
Q Consensus 230 ~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~ 275 (732)
+..+++|+.|+|++|+++..++....+..+..|+
T Consensus 291 ------------~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 291 ------------GQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLY 324 (390)
T ss_dssp ------------SSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEE
T ss_pred ------------cCCCCCCCEEECCCCcceecCccccccCcCCEEE
Confidence 1233455555555555554444433334444443
No 278
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=7.6e-27 Score=249.46 Aligned_cols=244 Identities=19% Similarity=0.217 Sum_probs=211.1
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCcc
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRE 83 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 83 (732)
+.+..|..+.++++|++|+|++|++++..|..+..+ +|++|+|++|+++ .+|..+. ++|++|+|++|++++..+..
T Consensus 66 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~ 142 (332)
T 2ft3_A 66 ISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGV 142 (332)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGG
T ss_pred CCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhH
Confidence 455556789999999999999999998889999988 8999999999999 7887776 89999999999999655667
Q ss_pred ccCCCCCCEEeCCCCccc--ccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccC
Q 040398 84 LGNLVNLETLRLSSNRLI--GNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDK 161 (732)
Q Consensus 84 l~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 161 (732)
+.++++|+.|++++|.++ +..|..+..+ +|+.|++++|++++ +|..+. ++|+.|+|++|.+++..+..+..+++
T Consensus 143 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~ 218 (332)
T 2ft3_A 143 FSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSK 218 (332)
T ss_dssp GSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTT
T ss_pred hCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCC
Confidence 999999999999999996 3678888888 99999999999985 565554 79999999999999888899999999
Q ss_pred CCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHH
Q 040398 162 LNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMF 241 (732)
Q Consensus 162 L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~ 241 (732)
|+.|++++|.+....+..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|++++..+........
T Consensus 219 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~-------- 289 (332)
T 2ft3_A 219 LYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGF-------- 289 (332)
T ss_dssp CSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSC--------
T ss_pred CCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccc--------
Confidence 999999999999999989999999999999999999 89999999999999999999999776654222110
Q ss_pred HhccCCCCeEEccCCcCc--CCCCC
Q 040398 242 IRGVYEHQSLDLSYNNFT--WQSPE 264 (732)
Q Consensus 242 ~~~l~~L~~LdLs~N~l~--~~~p~ 264 (732)
......|+.|++++|+++ ...|.
T Consensus 290 ~~~~~~l~~L~l~~N~~~~~~~~~~ 314 (332)
T 2ft3_A 290 GVKRAYYNGISLFNNPVPYWEVQPA 314 (332)
T ss_dssp CSSSCCBSEEECCSSSSCGGGSCGG
T ss_pred ccccccccceEeecCcccccccCcc
Confidence 012367899999999987 44443
No 279
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.95 E-value=9.3e-27 Score=269.47 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=73.3
Q ss_pred CccccCccCCCeeeccCcCCCCCCc-ccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc-CCCCCcc
Q 040398 153 PPSISALDKLNQLRISDLQGPNQTF-PMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE-LPDVAVP 230 (732)
Q Consensus 153 p~~~~~l~~L~~L~ls~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~-~p~~~~~ 230 (732)
|..+..+++|+.|++++|.+.+..+ ..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++. +|..
T Consensus 392 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~--- 468 (606)
T 3vq2_A 392 SANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV--- 468 (606)
T ss_dssp CCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC---
T ss_pred hhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHh---
Confidence 4556677888888888888888766 6788888888888888888888888888888888888888888874 5543
Q ss_pred CcchhhHHHHHHhccCCCCeEEccCCcCcCCCCC
Q 040398 231 ADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 231 ~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~ 264 (732)
++++++|+.|+|++|++++.+|.
T Consensus 469 -----------~~~l~~L~~L~Ls~n~l~~~~~~ 491 (606)
T 3vq2_A 469 -----------FANTTNLTFLDLSKCQLEQISWG 491 (606)
T ss_dssp -----------CTTCTTCCEEECTTSCCCEECTT
T ss_pred -----------hccCCCCCEEECCCCcCCccChh
Confidence 34455566666666666655543
No 280
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.9e-27 Score=268.58 Aligned_cols=112 Identities=21% Similarity=0.279 Sum_probs=79.5
Q ss_pred CCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCC
Q 040398 9 LPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNL 87 (732)
Q Consensus 9 lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 87 (732)
+|+.+. ++|++|+|++|.+++..|..|..+ +|++|+|++|++++..|..|+++++|++|+|++|+|+ .+|.. .+
T Consensus 15 ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l 89 (520)
T 2z7x_B 15 VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PT 89 (520)
T ss_dssp CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CC
T ss_pred cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--cc
Confidence 555544 677777777777776666667666 6777777777777666777777777777777777777 56655 67
Q ss_pred CCCCEEeCCCCcccc-cCCccccCCCCCCEEEccCcccc
Q 040398 88 VNLETLRLSSNRLIG-NLPMELVKLKNLTDFRINDNNFN 125 (732)
Q Consensus 88 ~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~ 125 (732)
++|++|+|++|+|++ .+|..++++++|+.|++++|.++
T Consensus 90 ~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 90 VNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp CCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCC
T ss_pred CCccEEeccCCccccccchhhhccCCcceEEEecCcccc
Confidence 777777777777775 45677777777777777777664
No 281
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=7e-27 Score=255.51 Aligned_cols=244 Identities=17% Similarity=0.119 Sum_probs=200.2
Q ss_pred CCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCE
Q 040398 14 VNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLET 92 (732)
Q Consensus 14 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 92 (732)
..+++|++|++++|.++...+..+..+ +|++|+|++|++++..+..+..+++|++|+|++|.+++..|..+.++++|++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 356899999999999995555557777 8999999999999777789999999999999999999777888999999999
Q ss_pred EeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeec-----
Q 040398 93 LRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRI----- 167 (732)
Q Consensus 93 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l----- 167 (732)
|+|++|+++...+..+.++++|+.|++++|.+++..+..+..+++|+.|++++|++++.. +..+++|+.|++
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccc
Confidence 999999999444444689999999999999999888899999999999999999998643 344455555544
Q ss_pred --------------cCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcc
Q 040398 168 --------------SDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADL 233 (732)
Q Consensus 168 --------------s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l 233 (732)
++|.+...+. ..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++.+|..
T Consensus 199 ~~~~~~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~------ 267 (390)
T 3o6n_A 199 STLAIPIAVEELDASHNSINVVRG---PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHP------ 267 (390)
T ss_dssp SEEECCSSCSEEECCSSCCCEEEC---CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGG------
T ss_pred cccCCCCcceEEECCCCeeeeccc---cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhH------
Confidence 4444444322 2246899999999999853 57889999999999999999887754
Q ss_pred hhhHHHHHHhccCCCCeEEccCCcCcCCCCCCccccCCCCcccccc
Q 040398 234 KFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLNLNLF 279 (732)
Q Consensus 234 ~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~~~~~ 279 (732)
+.++++|+.|+|++|++++.++....+..+..|++...
T Consensus 268 --------~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n 305 (390)
T 3o6n_A 268 --------FVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHN 305 (390)
T ss_dssp --------GTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSS
T ss_pred --------ccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCC
Confidence 67789999999999999987766555666666655443
No 282
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=4.5e-27 Score=267.03 Aligned_cols=255 Identities=20% Similarity=0.203 Sum_probs=187.8
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCc-cCCc
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSG-TIPR 82 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~ 82 (732)
+.+..|..|.++++|++|+|++|++++..|..|..+ +|++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|.
T Consensus 33 i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~ 109 (520)
T 2z7x_B 33 ISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICK 109 (520)
T ss_dssp CCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCG
T ss_pred ccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCccccccchh
Confidence 445445678888888888888888887777788777 7888888888887 56655 67888888888888875 4667
Q ss_pred cccCCCCCCEEeCCCCccc-------------------------ccCCccccCCC-------------------------
Q 040398 83 ELGNLVNLETLRLSSNRLI-------------------------GNLPMELVKLK------------------------- 112 (732)
Q Consensus 83 ~l~~l~~L~~L~L~~N~l~-------------------------~~~p~~l~~l~------------------------- 112 (732)
.++++++|++|+|++|+|+ +..|..+..+.
T Consensus 110 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l 189 (520)
T 2z7x_B 110 EFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTV 189 (520)
T ss_dssp GGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTC
T ss_pred hhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcc
Confidence 7777777777777777664 23344443322
Q ss_pred ----------------------------------------------------------CCCEEEccCccccccCCccc--
Q 040398 113 ----------------------------------------------------------NLTDFRINDNNFNGSAPDFI-- 132 (732)
Q Consensus 113 ----------------------------------------------------------~L~~L~L~~N~l~~~~p~~~-- 132 (732)
+|+.|++++|++++.+|..+
T Consensus 190 ~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~ 269 (520)
T 2z7x_B 190 ANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFD 269 (520)
T ss_dssp SEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCC
T ss_pred cceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhh
Confidence 67778888888877666654
Q ss_pred ---------------------------------------------------cCCCCCCEEEcccCCCcCcCCccccCccC
Q 040398 133 ---------------------------------------------------QSWTQLNRLEIQGSGLEGPIPPSISALDK 161 (732)
Q Consensus 133 ---------------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 161 (732)
..+++|+.|++++|++++.+|..+..+++
T Consensus 270 ~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 349 (520)
T 2z7x_B 270 YSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTE 349 (520)
T ss_dssp CCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSS
T ss_pred cccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCC
Confidence 67889999999999999889999999999
Q ss_pred CCeeeccCcCCCCCC--cccccCCCCccEEEcccccccCCcchh-hcCCCCCcEEeCCCCcCcccCCCCCccCcc-----
Q 040398 162 LNQLRISDLQGPNQT--FPMLRNMTGLTRIILRNCNIAGEIPEY-IWGIKNLRFLDLSFNQLTGELPDVAVPADL----- 233 (732)
Q Consensus 162 L~~L~ls~N~l~~~~--~~~l~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l----- 233 (732)
|+.|++++|.+.+++ +..+..+++|++|+|++|++++.+|.. +..+++|+.|+|++|++++.+|.... ..+
T Consensus 350 L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-~~L~~L~L 428 (520)
T 2z7x_B 350 LETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP-PRIKVLDL 428 (520)
T ss_dssp CCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC-TTCCEEEC
T ss_pred CCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc-ccCCEEEC
Confidence 999999999998743 356889999999999999999767764 77889999999999999887765421 111
Q ss_pred ---hhhHHHHHHhccCCCCeEEccCCcCcCCCC
Q 040398 234 ---KFTQILMFIRGVYEHQSLDLSYNNFTWQSP 263 (732)
Q Consensus 234 ---~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p 263 (732)
....++..+.++++|+.|+|++|+|+..++
T Consensus 429 s~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~ 461 (520)
T 2z7x_B 429 HSNKIKSIPKQVVKLEALQELNVASNQLKSVPD 461 (520)
T ss_dssp CSSCCCCCCGGGGGCTTCCEEECCSSCCCCCCT
T ss_pred CCCcccccchhhhcCCCCCEEECCCCcCCccCH
Confidence 011223334455666666666666664443
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=5.5e-27 Score=270.73 Aligned_cols=206 Identities=18% Similarity=0.150 Sum_probs=125.4
Q ss_pred CCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCC
Q 040398 13 IVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLE 91 (732)
Q Consensus 13 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 91 (732)
+.++++|++|+|++|.+++..|..|..+ +|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|.++++|+
T Consensus 71 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 150 (597)
T 3oja_B 71 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 150 (597)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred HccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCC
Confidence 4566777777777777776666666666 577777777777765566667777777777777777633333456677777
Q ss_pred EEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCc-CCccc--------------
Q 040398 92 TLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGP-IPPSI-------------- 156 (732)
Q Consensus 92 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~-------------- 156 (732)
+|+|++|.|++..|..+..+++|+.|+|++|.+++.. +..+++|+.|++++|.+++. .|..+
T Consensus 151 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~ 227 (597)
T 3oja_B 151 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVR 227 (597)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEE
T ss_pred EEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccc
Confidence 7777777777666666777777777777777766432 22233333333333322210 00000
Q ss_pred -cCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc
Q 040398 157 -SALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 157 -~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
...++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.
T Consensus 228 ~~~~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l 293 (597)
T 3oja_B 228 GPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL 293 (597)
T ss_dssp CSCCSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE
T ss_pred cccCCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC
Confidence 0013456666666666553 4566677777777777777766666777777777777777777653
No 284
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=7.7e-27 Score=267.71 Aligned_cols=113 Identities=19% Similarity=0.231 Sum_probs=83.8
Q ss_pred CCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCC
Q 040398 9 LPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNL 87 (732)
Q Consensus 9 lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 87 (732)
+|..+. ++|++|+|++|.+++..|..|..+ +|++|+|++|++++..|..|.++++|++|+|++|+|+ .+|.. .+
T Consensus 46 ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l 120 (562)
T 3a79_B 46 VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PM 120 (562)
T ss_dssp CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CC
T ss_pred CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--cc
Confidence 454443 678888888888876666777777 6888888888888666777888888888888888877 66665 67
Q ss_pred CCCCEEeCCCCcccc-cCCccccCCCCCCEEEccCccccc
Q 040398 88 VNLETLRLSSNRLIG-NLPMELVKLKNLTDFRINDNNFNG 126 (732)
Q Consensus 88 ~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~ 126 (732)
++|++|+|++|+|++ .+|..+.++++|+.|++++|++++
T Consensus 121 ~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 121 ASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp TTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred ccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 788888888888775 345677777788887777777753
No 285
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.94 E-value=2.6e-26 Score=269.51 Aligned_cols=239 Identities=19% Similarity=0.233 Sum_probs=142.8
Q ss_pred cCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccc----------------------------cccccCCccccC
Q 040398 12 QIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFAN----------------------------RLSGNIPSHLGN 62 (732)
Q Consensus 12 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n----------------------------~l~~~~p~~l~~ 62 (732)
.+..+++|++|+|++|.+++..|..+..+ +|++|+|++| ++++..|..+..
T Consensus 324 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~ 403 (680)
T 1ziw_A 324 SFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW 403 (680)
T ss_dssp TTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT
T ss_pred hcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC
Confidence 66777777777777777776666656555 4555555554 444444555555
Q ss_pred CCCCCEEecccccCCccCC-ccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCcccc--ccCCccccCCCCCC
Q 040398 63 ITSLTYLDLEENQFSGTIP-RELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFN--GSAPDFIQSWTQLN 139 (732)
Q Consensus 63 l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~ 139 (732)
+++|++|+|++|.+++.+| ..+.++++|++|+|++|++++..+..+..+++|+.|++++|.+. +.+|..+..+++|+
T Consensus 404 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 404 LGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp CTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred CCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 6666666666666554444 35555566666666666655555555555666666666666554 34556666666666
Q ss_pred EEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCC--------cccccCCCCccEEEcccccccCCcchhhcCCCCCc
Q 040398 140 RLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQT--------FPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLR 211 (732)
Q Consensus 140 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~--------~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 211 (732)
.|+|++|++++..+..+..+++|+.|++++|.+..+. ...|..+++|+.|+|++|+++...+..|..+++|+
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELK 563 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcc
Confidence 6666666666555555666666666666666665432 12355666666666666666633333456666666
Q ss_pred EEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCC
Q 040398 212 FLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 212 ~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~ 264 (732)
.|+|++|+|++.++.. +.++++|+.|+|++|+|++.+|.
T Consensus 564 ~L~Ls~N~l~~l~~~~--------------~~~l~~L~~L~L~~N~l~~~~~~ 602 (680)
T 1ziw_A 564 IIDLGLNNLNTLPASV--------------FNNQVSLKSLNLQKNLITSVEKK 602 (680)
T ss_dssp EEECCSSCCCCCCTTT--------------TTTCTTCCEEECTTSCCCBCCHH
T ss_pred eeECCCCCCCcCCHhH--------------hCCCCCCCEEECCCCcCCccChh
Confidence 6666666666443332 44556666677777766666554
No 286
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=3.1e-26 Score=255.44 Aligned_cols=230 Identities=17% Similarity=0.185 Sum_probs=206.2
Q ss_pred CCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCC
Q 040398 18 YLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSS 97 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 97 (732)
....++.+++.++ .+|..+. .+|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP-SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC-TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCcEEEECCCCcC-ccCCCCC-CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 4678999999998 6776543 3799999999999988899999999999999999999987788999999999999999
Q ss_pred CcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccC-CCcCcCCccccCccCCCeeeccCcCCCCCC
Q 040398 98 NRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGS-GLEGPIPPSISALDKLNQLRISDLQGPNQT 176 (732)
Q Consensus 98 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 176 (732)
|+|++..+..+..+++|+.|+|++|+|+...+..|.++++|+.|+|++| .+....+..+..+++|+.|+|++|.++.++
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 212 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP 212 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc
Confidence 9999766777999999999999999999888889999999999999995 455444557999999999999999999874
Q ss_pred cccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCC
Q 040398 177 FPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYN 256 (732)
Q Consensus 177 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N 256 (732)
.+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|.. +.++++|+.|||++|
T Consensus 213 --~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--------------~~~l~~L~~L~L~~N 276 (452)
T 3zyi_A 213 --NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNA--------------FDGLASLVELNLAHN 276 (452)
T ss_dssp --CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTT--------------TTTCTTCCEEECCSS
T ss_pred --cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHH--------------hcCCCCCCEEECCCC
Confidence 5889999999999999999888999999999999999999999887765 677899999999999
Q ss_pred cCcCCCCCC
Q 040398 257 NFTWQSPEQ 265 (732)
Q Consensus 257 ~l~~~~p~~ 265 (732)
+|++.++..
T Consensus 277 ~l~~~~~~~ 285 (452)
T 3zyi_A 277 NLSSLPHDL 285 (452)
T ss_dssp CCSCCCTTS
T ss_pred cCCccChHH
Confidence 999887764
No 287
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.94 E-value=1e-26 Score=279.25 Aligned_cols=246 Identities=17% Similarity=0.197 Sum_probs=153.1
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCcccc-Ccccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCc
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSI-PREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPR 82 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 82 (732)
+++..|..|.++++|++|+|++|.+.+.+ |..|..+ +|++|+|++|++++..|..|+++++|++|+|++|.+++.+|.
T Consensus 36 i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~ 115 (844)
T 3j0a_A 36 IRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLK 115 (844)
T ss_dssp CCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCST
T ss_pred CCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCccccc
Confidence 45556677777777777777777554444 5667766 677777777777766677777777777777777777765555
Q ss_pred c--ccCCCCCCEEeCCCCcccccCC-ccccCCCCCCEEEccCccccccCCccccCC--CCCCEEEcccCCCcCcCCcccc
Q 040398 83 E--LGNLVNLETLRLSSNRLIGNLP-MELVKLKNLTDFRINDNNFNGSAPDFIQSW--TQLNRLEIQGSGLEGPIPPSIS 157 (732)
Q Consensus 83 ~--l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~ 157 (732)
. +.++++|++|+|++|.+++..+ ..+.++++|+.|+|++|.+++..+..+..+ ++|+.|+|++|.+.+..|..+.
T Consensus 116 ~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~ 195 (844)
T 3j0a_A 116 DGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWG 195 (844)
T ss_dssp TCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCC
T ss_pred CccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchh
Confidence 4 7777777777777777775443 467777777777777777766666555544 4444444444444433333322
Q ss_pred Cc--------------------------------------------------------------------cCCCeeeccC
Q 040398 158 AL--------------------------------------------------------------------DKLNQLRISD 169 (732)
Q Consensus 158 ~l--------------------------------------------------------------------~~L~~L~ls~ 169 (732)
.+ ++|+.|++++
T Consensus 196 ~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~ 275 (844)
T 3j0a_A 196 KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSH 275 (844)
T ss_dssp SSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTT
T ss_pred hcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCC
Confidence 22 3445555555
Q ss_pred cCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCC
Q 040398 170 LQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQ 249 (732)
Q Consensus 170 N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~ 249 (732)
|.+....+..|..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++..|.. +.++++|+
T Consensus 276 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~--------------~~~l~~L~ 341 (844)
T 3j0a_A 276 GFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSN--------------FYGLPKVA 341 (844)
T ss_dssp CCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCS--------------CSSCTTCC
T ss_pred CcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHH--------------hcCCCCCC
Confidence 5555544555555566666666666665555555555666666666666665544433 44555666
Q ss_pred eEEccCCcCcCCCCC
Q 040398 250 SLDLSYNNFTWQSPE 264 (732)
Q Consensus 250 ~LdLs~N~l~~~~p~ 264 (732)
.|+|++|++++.++.
T Consensus 342 ~L~L~~N~i~~~~~~ 356 (844)
T 3j0a_A 342 YIDLQKNHIAIIQDQ 356 (844)
T ss_dssp EEECCSCCCCCCCSS
T ss_pred EEECCCCCCCccChh
Confidence 666666666555543
No 288
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-26 Score=267.72 Aligned_cols=241 Identities=18% Similarity=0.136 Sum_probs=194.9
Q ss_pred CCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEE
Q 040398 15 NLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETL 93 (732)
Q Consensus 15 ~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 93 (732)
.+++++.|++++|.++...+..+..+ +|++|+|++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46789999999999996666667777 89999999999998888899999999999999999998778889999999999
Q ss_pred eCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCC
Q 040398 94 RLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGP 173 (732)
Q Consensus 94 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 173 (732)
+|++|.|++..+..|.++++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++.. +..+++|+.|++++|.+.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999555555799999999999999999999999999999999999999998653 344455555555555443
Q ss_pred -------------------CCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcch
Q 040398 174 -------------------NQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLK 234 (732)
Q Consensus 174 -------------------~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~ 234 (732)
..+... .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..
T Consensus 206 ~l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~------- 273 (597)
T 3oja_B 206 TLAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHP------- 273 (597)
T ss_dssp EEECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGG-------
T ss_pred cccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHH-------
Confidence 332222 3579999999999986 467899999999999999999988864
Q ss_pred hhHHHHHHhccCCCCeEEccCCcCcCCCCCCccccCCCCcccc
Q 040398 235 FTQILMFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLNLN 277 (732)
Q Consensus 235 ~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~~~ 277 (732)
++++++|+.|+|++|++++.++....+..+..|++.
T Consensus 274 -------~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls 309 (597)
T 3oja_B 274 -------FVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLS 309 (597)
T ss_dssp -------GTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECC
T ss_pred -------hcCccCCCEEECCCCCCCCCCcccccCCCCcEEECC
Confidence 556667777777777777665544444445444443
No 289
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=4.2e-28 Score=256.90 Aligned_cols=242 Identities=19% Similarity=0.190 Sum_probs=192.5
Q ss_pred cCCCCCCCCEEEcccCcCccccCccccccccceEecccccc-cccCCcccc-------CCCCCCEEecccccCCccCCcc
Q 040398 12 QIVNLPYLETVDFAYNYLHGSIPREWASMQLKYISVFANRL-SGNIPSHLG-------NITSLTYLDLEENQFSGTIPRE 83 (732)
Q Consensus 12 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l-~~~~p~~l~-------~l~~L~~L~Ls~N~l~~~~p~~ 83 (732)
.++.+++|++|++++|.+ .+|..+... |++|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 355677899999999999 677766554 88999999999 456777666 7899999999999999888887
Q ss_pred c--cCCCCCCEEeCCCCcccccCCccccCC-----CCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCc--CCc
Q 040398 84 L--GNLVNLETLRLSSNRLIGNLPMELVKL-----KNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGP--IPP 154 (732)
Q Consensus 84 l--~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~ 154 (732)
+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|++++..|..|+.+++|+.|+|++|++.+. ++.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 6 8899999999999999866 8778777 8999999999999888888999999999999999998765 333
Q ss_pred cc--cCccCCCeeeccCcCCCCC---CcccccCCCCccEEEcccccccCCcc-hhhcCCCCCcEEeCCCCcCcccCCCCC
Q 040398 155 SI--SALDKLNQLRISDLQGPNQ---TFPMLRNMTGLTRIILRNCNIAGEIP-EYIWGIKNLRFLDLSFNQLTGELPDVA 228 (732)
Q Consensus 155 ~~--~~l~~L~~L~ls~N~l~~~---~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 228 (732)
.+ ..+++|+.|++++|.++.. ....+..+++|++|+|++|++++.+| ..+..+++|+.|+|++|+|+ .+|...
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 44 7889999999999998843 23445678899999999999998775 45566889999999999998 666541
Q ss_pred ccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCCCccccCCCCcc
Q 040398 229 VPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLN 275 (732)
Q Consensus 229 ~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~ 275 (732)
. ++|+.|||++|+|++. |....+..+..|+
T Consensus 273 --------------~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~ 302 (312)
T 1wwl_A 273 --------------P--AKLSVLDLSYNRLDRN-PSPDELPQVGNLS 302 (312)
T ss_dssp --------------C--SEEEEEECCSSCCCSC-CCTTTSCEEEEEE
T ss_pred --------------c--CCceEEECCCCCCCCC-hhHhhCCCCCEEe
Confidence 1 5788999999999888 4444444444443
No 290
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=5.8e-26 Score=252.31 Aligned_cols=230 Identities=17% Similarity=0.186 Sum_probs=205.9
Q ss_pred CCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCC
Q 040398 18 YLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSS 97 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 97 (732)
....++.+++.++ .+|..+. .++++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~-~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS-TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC-TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCCEEEeCCCCcC-cCCCCCC-CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 4678999999999 7776554 3699999999999988889999999999999999999977778999999999999999
Q ss_pred CcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCC-CcCcCCccccCccCCCeeeccCcCCCCCC
Q 040398 98 NRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSG-LEGPIPPSISALDKLNQLRISDLQGPNQT 176 (732)
Q Consensus 98 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 176 (732)
|+|++..+..|..+++|+.|+|++|.|+...+..|..+++|+.|+|++|+ +....+..|..+++|+.|+|++|.++.++
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 201 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP 201 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc
Confidence 99996666689999999999999999998888899999999999999955 44444557999999999999999999765
Q ss_pred cccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCC
Q 040398 177 FPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYN 256 (732)
Q Consensus 177 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N 256 (732)
.+..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..|.. +.++++|+.|||++|
T Consensus 202 --~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~--------------~~~l~~L~~L~L~~N 265 (440)
T 3zyj_A 202 --NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNA--------------FDNLQSLVEINLAHN 265 (440)
T ss_dssp --CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTS--------------STTCTTCCEEECTTS
T ss_pred --ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhh--------------hcCCCCCCEEECCCC
Confidence 5889999999999999999888999999999999999999999887765 667889999999999
Q ss_pred cCcCCCCCC
Q 040398 257 NFTWQSPEQ 265 (732)
Q Consensus 257 ~l~~~~p~~ 265 (732)
+|++.++..
T Consensus 266 ~l~~~~~~~ 274 (440)
T 3zyj_A 266 NLTLLPHDL 274 (440)
T ss_dssp CCCCCCTTT
T ss_pred CCCccChhH
Confidence 999888764
No 291
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=6e-27 Score=247.18 Aligned_cols=216 Identities=19% Similarity=0.199 Sum_probs=196.3
Q ss_pred cCCcc-CCCCCCCCEEEcccCcCccc--cCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCC-c
Q 040398 8 TLPPQ-IVNLPYLETVDFAYNYLHGS--IPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIP-R 82 (732)
Q Consensus 8 ~lP~~-l~~l~~L~~L~Ls~N~l~~~--~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~ 82 (732)
.+|+. +.++++|++|+|++|.++.. .|..+..+ +|++|+|++|.+. .+|..+..+++|++|+|++|++++..+ .
T Consensus 42 ~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~ 120 (306)
T 2z66_A 42 SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFS 120 (306)
T ss_dssp CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTT
T ss_pred ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccch
Confidence 46654 79999999999999999843 35555555 8999999999999 688889999999999999999995444 5
Q ss_pred cccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccc-cCCccccCCCCCCEEEcccCCCcCcCCccccCccC
Q 040398 83 ELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNG-SAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDK 161 (732)
Q Consensus 83 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 161 (732)
.+..+++|++|+|++|.+++..+..+..+++|+.|++++|.+++ .+|..+..+++|+.|+|++|++++..|..+..+++
T Consensus 121 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 200 (306)
T 2z66_A 121 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 200 (306)
T ss_dssp TTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCC
Confidence 78999999999999999998889999999999999999999986 68899999999999999999999888999999999
Q ss_pred CCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCC-CCcEEeCCCCcCcccC
Q 040398 162 LNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIK-NLRFLDLSFNQLTGEL 224 (732)
Q Consensus 162 L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~g~~ 224 (732)
|+.|++++|.+.......+..+++|++|+|++|++++..|..+..++ +|+.|+|++|++++..
T Consensus 201 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 201 LQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred CCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 99999999999999988899999999999999999999999999985 9999999999999653
No 292
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=3.1e-28 Score=257.96 Aligned_cols=231 Identities=18% Similarity=0.236 Sum_probs=196.4
Q ss_pred cCCccCCCCCCCCEEEcccCcCc-cccCcccc-------cc-ccceEecccccccccCCccc--cCCCCCCEEecccccC
Q 040398 8 TLPPQIVNLPYLETVDFAYNYLH-GSIPREWA-------SM-QLKYISVFANRLSGNIPSHL--GNITSLTYLDLEENQF 76 (732)
Q Consensus 8 ~lP~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~-------~~-~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l 76 (732)
.+|+.+... |+.|+|++|.++ ..+|..+. .+ +|++|+|++|++++.+|..+ +.+++|++|+|++|++
T Consensus 56 ~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 133 (312)
T 1wwl_A 56 ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133 (312)
T ss_dssp CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBC
T ss_pred ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCC
Confidence 456655555 899999999994 46676664 44 89999999999999999887 8999999999999999
Q ss_pred CccCCccccCC-----CCCCEEeCCCCcccccCCccccCCCCCCEEEccCcccccc--CCccc--cCCCCCCEEEcccCC
Q 040398 77 SGTIPRELGNL-----VNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGS--APDFI--QSWTQLNRLEIQGSG 147 (732)
Q Consensus 77 ~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~Ls~N~ 147 (732)
++. |..+..+ ++|++|+|++|+|++..|..+..+++|+.|+|++|++.+. .+..+ ..+++|+.|+|++|+
T Consensus 134 ~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 134 ATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred cch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 966 8888777 9999999999999988889999999999999999998765 34444 889999999999999
Q ss_pred CcC--cCC-ccccCccCCCeeeccCcCCCCCC-cccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc
Q 040398 148 LEG--PIP-PSISALDKLNQLRISDLQGPNQT-FPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 148 l~~--~~p-~~~~~l~~L~~L~ls~N~l~~~~-~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
+++ .++ ..+..+++|+.|++++|.+.+.. ...+..+++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++.
T Consensus 213 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC
T ss_pred CcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC
Confidence 983 222 34567899999999999999876 466778899999999999999 7888776 8999999999999976
Q ss_pred CCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcC
Q 040398 224 LPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTW 260 (732)
Q Consensus 224 ~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~ 260 (732)
|. +..+++|+.|+|++|+|++
T Consensus 290 -p~---------------~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 290 -PS---------------PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -CC---------------TTTSCEEEEEECTTCTTTC
T ss_pred -hh---------------HhhCCCCCEEeccCCCCCC
Confidence 53 3456889999999999975
No 293
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=248.68 Aligned_cols=239 Identities=20% Similarity=0.222 Sum_probs=208.5
Q ss_pred cCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccC
Q 040398 8 TLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGN 86 (732)
Q Consensus 8 ~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 86 (732)
.+|..+. ++|++|+|++|++++..+..+..+ +|++|+|++|++++..|..|+++++|++|+|++|++++..+..+.+
T Consensus 45 ~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 122 (353)
T 2z80_A 45 SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKP 122 (353)
T ss_dssp SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTT
T ss_pred ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCC
Confidence 3565554 489999999999997666688888 8999999999999877889999999999999999999444445899
Q ss_pred CCCCCEEeCCCCcccccCCc--cccCCCCCCEEEccCc-cccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCC
Q 040398 87 LVNLETLRLSSNRLIGNLPM--ELVKLKNLTDFRINDN-NFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLN 163 (732)
Q Consensus 87 l~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 163 (732)
+++|++|+|++|+++ .+|. .+..+++|+.|++++| .+....+..+..+++|+.|++++|.+++..|..+..+++|+
T Consensus 123 l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 201 (353)
T 2z80_A 123 LSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVS 201 (353)
T ss_dssp CTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEE
T ss_pred CccCCEEECCCCCCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCC
Confidence 999999999999999 5555 7899999999999999 57777788999999999999999999998899999999999
Q ss_pred eeeccCcCCCCCCcccccCCCCccEEEcccccccCC-------------------------------cchhhcCCCCCcE
Q 040398 164 QLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGE-------------------------------IPEYIWGIKNLRF 212 (732)
Q Consensus 164 ~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~-------------------------------~p~~l~~l~~L~~ 212 (732)
.|++++|.+...+...+..+++|++|+|++|++++. +|..+..+++|+.
T Consensus 202 ~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~ 281 (353)
T 2z80_A 202 HLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLE 281 (353)
T ss_dssp EEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCE
T ss_pred eecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCE
Confidence 999999999877776777899999999999999873 4567889999999
Q ss_pred EeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCC
Q 040398 213 LDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSP 263 (732)
Q Consensus 213 L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p 263 (732)
|+|++|+++ .+|... +.++++|+.|+|++|++++..|
T Consensus 282 L~Ls~N~l~-~i~~~~-------------~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 282 LEFSRNQLK-SVPDGI-------------FDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp EECCSSCCC-CCCTTT-------------TTTCTTCCEEECCSSCBCCCHH
T ss_pred EECCCCCCC-ccCHHH-------------HhcCCCCCEEEeeCCCccCcCC
Confidence 999999999 555431 4677899999999999986543
No 294
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.94 E-value=3.5e-26 Score=274.45 Aligned_cols=261 Identities=18% Similarity=0.170 Sum_probs=197.2
Q ss_pred CCCCCEEEcccCcCccccCcccccc-ccceEecccccccccC-CccccCCCCCCEEecccccCCccCCccccCCCCCCEE
Q 040398 16 LPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNI-PSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETL 93 (732)
Q Consensus 16 l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 93 (732)
.++|++|+|++|.+++..|..|..+ +|++|+|++|.+.+.+ |..|+++++|++|+|++|.|++..|..|.++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 3689999999999998889999999 8999999999776666 7889999999999999999998889999999999999
Q ss_pred eCCCCcccccCCcc--ccCCCCCCEEEccCccccccCC-ccccCCCCCCEEEcccCCCcCcCCccccCc--cCCCeeecc
Q 040398 94 RLSSNRLIGNLPME--LVKLKNLTDFRINDNNFNGSAP-DFIQSWTQLNRLEIQGSGLEGPIPPSISAL--DKLNQLRIS 168 (732)
Q Consensus 94 ~L~~N~l~~~~p~~--l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~ls 168 (732)
+|++|.+++.+|.. +.++++|+.|+|++|.+++..+ ..|+++++|+.|+|++|.+++..+..+..+ ++|+.|+++
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999877665 9999999999999999987755 679999999999999999999999999888 899999999
Q ss_pred CcCCCCCCcccccCCCC------ccEEEcccccccCCcchhhcC------------------------------------
Q 040398 169 DLQGPNQTFPMLRNMTG------LTRIILRNCNIAGEIPEYIWG------------------------------------ 206 (732)
Q Consensus 169 ~N~l~~~~~~~l~~l~~------L~~L~Ls~N~l~~~~p~~l~~------------------------------------ 206 (732)
+|.+....+..+..+++ |+.|+|++|.+++.+|..+..
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 99888766555544443 666666666555444433221
Q ss_pred --CCCCcEEeCCCCcCcccCCCCCc-cCcch-----hhH---H-HHHHhccCCCCeEEccCCcCcCCCCCC-ccccCCCC
Q 040398 207 --IKNLRFLDLSFNQLTGELPDVAV-PADLK-----FTQ---I-LMFIRGVYEHQSLDLSYNNFTWQSPEQ-PACREKPN 273 (732)
Q Consensus 207 --l~~L~~L~Ls~N~l~g~~p~~~~-~~~l~-----~~~---~-~~~~~~l~~L~~LdLs~N~l~~~~p~~-~~~~~~~~ 273 (732)
.++|+.|+|++|.+++..|.... ...+. ... + +..+.++++|+.|+|++|++++.+|.. ..+..+..
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 13455555555555544443211 00000 000 0 122667788888888888888776642 33344444
Q ss_pred ccc
Q 040398 274 LNL 276 (732)
Q Consensus 274 l~~ 276 (732)
|++
T Consensus 343 L~L 345 (844)
T 3j0a_A 343 IDL 345 (844)
T ss_dssp EEC
T ss_pred EEC
Confidence 443
No 295
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.94 E-value=4.5e-26 Score=261.32 Aligned_cols=125 Identities=26% Similarity=0.348 Sum_probs=99.7
Q ss_pred CCcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCc-cCC
Q 040398 4 SLPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSG-TIP 81 (732)
Q Consensus 4 ~~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p 81 (732)
.+++..|.+|.++++|++|+|++|++++..|..|..+ +|++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|
T Consensus 63 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p 139 (562)
T 3a79_B 63 SISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVC 139 (562)
T ss_dssp CCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCC
T ss_pred CccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCch
Confidence 3555556799999999999999999998889999988 8999999999999 78876 89999999999999985 346
Q ss_pred ccccCCCCCCEEeCCCCcccccCCccccCCCCC--CEEEccCccc--cccCCccccC
Q 040398 82 RELGNLVNLETLRLSSNRLIGNLPMELVKLKNL--TDFRINDNNF--NGSAPDFIQS 134 (732)
Q Consensus 82 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~~~~p~~~~~ 134 (732)
..|+++++|++|+|++|+|++. .+..+++| +.|++++|.+ ++..|..+..
T Consensus 140 ~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~ 193 (562)
T 3a79_B 140 KEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQI 193 (562)
T ss_dssp GGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEE
T ss_pred HhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccc
Confidence 8999999999999999998742 33444444 6666666666 4444444433
No 296
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.94 E-value=3.1e-26 Score=268.84 Aligned_cols=252 Identities=21% Similarity=0.231 Sum_probs=202.5
Q ss_pred CCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCC
Q 040398 9 LPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNL 87 (732)
Q Consensus 9 lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 87 (732)
+|..+. ++|++|+|++|.+++..+..|..+ +|++|+|++|++++..|..++++++|++|+|++|++++..+..|.++
T Consensus 19 ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l 96 (680)
T 1ziw_A 19 VPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFC 96 (680)
T ss_dssp CCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccC
Confidence 454443 679999999999997777778888 79999999999998888889999999999999999984444478999
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCcccc--CccCCCee
Q 040398 88 VNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSIS--ALDKLNQL 165 (732)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L 165 (732)
++|++|+|++|++++..|..+.++++|+.|++++|.+++..|..+.++++|+.|++++|.+++..+..+. .+++|+.|
T Consensus 97 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 176 (680)
T 1ziw_A 97 TNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKL 176 (680)
T ss_dssp TTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEE
T ss_pred CCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEE
Confidence 9999999999999876677899999999999999999988888899999999999999999877776654 45889999
Q ss_pred eccCcCCCCCCcccccCC---------------------------CCccEEEcccccccCCcchhhcCCCC--CcEEeCC
Q 040398 166 RISDLQGPNQTFPMLRNM---------------------------TGLTRIILRNCNIAGEIPEYIWGIKN--LRFLDLS 216 (732)
Q Consensus 166 ~ls~N~l~~~~~~~l~~l---------------------------~~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~L~Ls 216 (732)
++++|.+.+..+..+..+ ++|+.|+|++|.+++..|..+..++. |+.|+|+
T Consensus 177 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls 256 (680)
T 1ziw_A 177 ELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLS 256 (680)
T ss_dssp ECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECT
T ss_pred ECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECC
Confidence 999999888777666544 45677777888888777777777654 8888888
Q ss_pred CCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCC-CccccCCCCccc
Q 040398 217 FNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPE-QPACREKPNLNL 276 (732)
Q Consensus 217 ~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~-~~~~~~~~~l~~ 276 (732)
+|++++.+|.. ++++++|+.|+|++|++++.+|. ...|..+..|++
T Consensus 257 ~n~l~~~~~~~--------------~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 303 (680)
T 1ziw_A 257 YNNLNVVGNDS--------------FAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNL 303 (680)
T ss_dssp TSCCCEECTTT--------------TTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEEC
T ss_pred CCCcCccCccc--------------ccCcccccEeeCCCCccCccChhhhcCCCCccEEec
Confidence 88888776654 56678888888888888887764 334444444443
No 297
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=1.9e-26 Score=266.88 Aligned_cols=240 Identities=19% Similarity=0.205 Sum_probs=124.8
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCc--------------------cccCC
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPS--------------------HLGNI 63 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~--------------------~l~~l 63 (732)
+++.+|. +..+++|++|++++|.++ .+| .+..+ +|++|++++|++ +.+|. .++.+
T Consensus 274 ~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l 349 (606)
T 3vq2_A 274 FSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVAL 349 (606)
T ss_dssp CCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCC
T ss_pred ccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccC
Confidence 3444554 555555555555555554 333 33333 455555555555 24442 23344
Q ss_pred CCCCEEecccccCCcc--CCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCC-ccccCCCCCCE
Q 040398 64 TSLTYLDLEENQFSGT--IPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAP-DFIQSWTQLNR 140 (732)
Q Consensus 64 ~~L~~L~Ls~N~l~~~--~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~ 140 (732)
++|++|+|++|++++. +|..+..+++|++|+|++|.++ .+|..+..+++|+.|++++|++.+..| ..+..+++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 4555555555554432 2444555555555555555554 244455555555555555555554444 44555555555
Q ss_pred EEcccCCCcCcCCccccCccCCCeeeccCcCCCC-CCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCc
Q 040398 141 LEIQGSGLEGPIPPSISALDKLNQLRISDLQGPN-QTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQ 219 (732)
Q Consensus 141 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 219 (732)
|++++|.+++..|..+..+++|+.|++++|.+.+ ..+..+..+++|+.|+|++|++++..|..+..+++|+.|+|++|+
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 5555555555555555555555555555555554 234445555555555555555555555555555555555555555
Q ss_pred CcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCC
Q 040398 220 LTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSP 263 (732)
Q Consensus 220 l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p 263 (732)
+++.+|.. +.++++|+.|||++|+|+..++
T Consensus 509 l~~~~~~~--------------~~~l~~L~~L~l~~N~l~~~p~ 538 (606)
T 3vq2_A 509 LLFLDSSH--------------YNQLYSLSTLDCSFNRIETSKG 538 (606)
T ss_dssp CSCEEGGG--------------TTTCTTCCEEECTTSCCCCEES
T ss_pred CCCcCHHH--------------ccCCCcCCEEECCCCcCcccCH
Confidence 55544432 4445556666666666654433
No 298
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=1.9e-26 Score=263.58 Aligned_cols=266 Identities=22% Similarity=0.256 Sum_probs=186.3
Q ss_pred cCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccC
Q 040398 8 TLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGN 86 (732)
Q Consensus 8 ~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 86 (732)
+||+.+. ++|++|+|++|++++..|..+..+ +|++|+|++|++++..|..|+++++|++|+|++|++++..|..|++
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 96 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP 96 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTT
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhcc
Confidence 3555543 678999999999987778888877 7999999999998777788888999999999999998666666888
Q ss_pred CCCCCEEeCCCCcccc-cCCccccCCCCCCEEEccCccccccC-CccccCCCCCCEEEcccCCCcCcCCccccC------
Q 040398 87 LVNLETLRLSSNRLIG-NLPMELVKLKNLTDFRINDNNFNGSA-PDFIQSWTQLNRLEIQGSGLEGPIPPSISA------ 158 (732)
Q Consensus 87 l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------ 158 (732)
+++|++|+|++|++++ ..|..+.++++|+.|++++|.+.+.+ +..+.++++|+.|++++|++++..|..+..
T Consensus 97 l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 176 (549)
T 2z81_A 97 LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHH 176 (549)
T ss_dssp CTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred CCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCce
Confidence 9999999999998885 35677888899999999988844344 467888888999999999888877777654
Q ss_pred ------------------ccCCCeeeccCcCCCCCCc---ccc-------------------------------------
Q 040398 159 ------------------LDKLNQLRISDLQGPNQTF---PML------------------------------------- 180 (732)
Q Consensus 159 ------------------l~~L~~L~ls~N~l~~~~~---~~l------------------------------------- 180 (732)
+++|+.|++++|.+.+... ...
T Consensus 177 L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l 256 (549)
T 2z81_A 177 LTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEV 256 (549)
T ss_dssp EEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEE
T ss_pred EecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccc
Confidence 4566667777776665310 000
Q ss_pred --------------------------------------------------cCCCCccEEEcccccccCCcchhh-cCCCC
Q 040398 181 --------------------------------------------------RNMTGLTRIILRNCNIAGEIPEYI-WGIKN 209 (732)
Q Consensus 181 --------------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~ 209 (732)
..+++|+.|++++|++. .+|..+ ..+++
T Consensus 257 ~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~ 335 (549)
T 2z81_A 257 EFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKS 335 (549)
T ss_dssp EEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTT
T ss_pred ccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCcc
Confidence 01124555555555555 455544 46888
Q ss_pred CcEEeCCCCcCcccCCCC----CccCcch--------hhHH---HHHHhccCCCCeEEccCCcCcCCCCCCccccCCCCc
Q 040398 210 LRFLDLSFNQLTGELPDV----AVPADLK--------FTQI---LMFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNL 274 (732)
Q Consensus 210 L~~L~Ls~N~l~g~~p~~----~~~~~l~--------~~~~---~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l 274 (732)
|+.|+|++|++++.+|.. .....++ ...+ ...+..+++|+.|||++|+|+..++....+..+..|
T Consensus 336 L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L 415 (549)
T 2z81_A 336 LEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFL 415 (549)
T ss_dssp CCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEE
T ss_pred ccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEE
Confidence 888888888888754311 0011111 1111 234778888888888888888665544444445445
Q ss_pred cc
Q 040398 275 NL 276 (732)
Q Consensus 275 ~~ 276 (732)
++
T Consensus 416 ~L 417 (549)
T 2z81_A 416 NL 417 (549)
T ss_dssp EC
T ss_pred EC
Confidence 44
No 299
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=1.7e-26 Score=263.93 Aligned_cols=128 Identities=19% Similarity=0.283 Sum_probs=95.0
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCc-cCCc
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSG-TIPR 82 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~ 82 (732)
+++..|.++.++++|++|+|++|++++..|..|..+ +|++|+|++|++++..|..++++++|++|+|++|.+++ .+|.
T Consensus 38 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 117 (549)
T 2z81_A 38 ITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTS 117 (549)
T ss_dssp CCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSC
T ss_pred cCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhh
Confidence 455567788888888888888888887777778777 78888888888886656668888888888888888875 3466
Q ss_pred cccCCCCCCEEeCCCCcccccCC-ccccCCCCCCEEEccCccccccCCccc
Q 040398 83 ELGNLVNLETLRLSSNRLIGNLP-MELVKLKNLTDFRINDNNFNGSAPDFI 132 (732)
Q Consensus 83 ~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~ 132 (732)
.+.++++|++|+|++|++.+.+| ..+.++++|+.|++++|++++..|..+
T Consensus 118 ~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 168 (549)
T 2z81_A 118 LFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSL 168 (549)
T ss_dssp SCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT
T ss_pred hhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhh
Confidence 77788888888888877433443 466677777777777777766555444
No 300
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.2e-25 Score=233.64 Aligned_cols=226 Identities=18% Similarity=0.129 Sum_probs=173.2
Q ss_pred CEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCc
Q 040398 20 ETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNR 99 (732)
Q Consensus 20 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 99 (732)
..++..+.+++ .+|..+. .+|++|+|++|++++..+..+.++++|++|+|++|++++..+..+.++++|++|+|++|+
T Consensus 10 ~~~~c~~~~l~-~ip~~l~-~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP-FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC-TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEEecCCCcc-ccCCCCC-CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 34566666666 5665443 268888888888886666678888888888888888885555678888888888888888
Q ss_pred ccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCc-CCccccCccCCCeeeccCcCCCCCCcc
Q 040398 100 LIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGP-IPPSISALDKLNQLRISDLQGPNQTFP 178 (732)
Q Consensus 100 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~~~ 178 (732)
+++..+..+.++++|+.|++++|.+++..+..+..+++|+.|+|++|.+++. +|..+..+++|+.|++++|.++.+...
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred cCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 8877677788888888888888888876666788888888888888888763 578888888888888888888887777
Q ss_pred cccCCCCcc----EEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEcc
Q 040398 179 MLRNMTGLT----RIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLS 254 (732)
Q Consensus 179 ~l~~l~~L~----~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs 254 (732)
.+..+++|+ .|+|++|++++..+. .....+|+.|+|++|++++.++.. +.++++|+.|+|+
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~-~~~~~~L~~L~L~~n~l~~~~~~~--------------~~~l~~L~~L~l~ 232 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLKELALDTNQLKSVPDGI--------------FDRLTSLQKIWLH 232 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTT-SSCSCCEEEEECCSSCCSCCCTTT--------------TTTCCSCCEEECC
T ss_pred HhhhhhhccccceeeecCCCcccccCcc-ccCCCcccEEECCCCceeecCHhH--------------hcccccccEEEcc
Confidence 777776666 889999999854444 444558999999999998665543 5667889999999
Q ss_pred CCcCcCCC
Q 040398 255 YNNFTWQS 262 (732)
Q Consensus 255 ~N~l~~~~ 262 (732)
+|++++..
T Consensus 233 ~N~~~c~c 240 (276)
T 2z62_A 233 TNPWDCSC 240 (276)
T ss_dssp SSCBCCCT
T ss_pred CCcccccC
Confidence 99887543
No 301
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.3e-25 Score=233.41 Aligned_cols=215 Identities=14% Similarity=0.181 Sum_probs=191.4
Q ss_pred CCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCC
Q 040398 9 LPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNL 87 (732)
Q Consensus 9 lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 87 (732)
+|+.+. ++|++|+|++|++++..+..+..+ +|++|+|++|++++..+..+.++++|++|+|++|.+++..+..+.++
T Consensus 22 ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 99 (276)
T 2z62_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL 99 (276)
T ss_dssp CCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC
T ss_pred cCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCC
Confidence 444433 479999999999997777788888 89999999999997777789999999999999999997777889999
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCCEEEccCcccccc-CCccccCCCCCCEEEcccCCCcCcCCccccCccCCC---
Q 040398 88 VNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGS-APDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLN--- 163 (732)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--- 163 (732)
++|++|++++|++++..+..+..+++|+.|++++|.+++. +|..+..+++|+.|+|++|++++..+..+..+++|+
T Consensus 100 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~ 179 (276)
T 2z62_A 100 SSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179 (276)
T ss_dssp TTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCC
T ss_pred ccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccc
Confidence 9999999999999977676899999999999999999864 699999999999999999999988788888888887
Q ss_pred -eeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCC
Q 040398 164 -QLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPD 226 (732)
Q Consensus 164 -~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~ 226 (732)
.|++++|.+..++...+... +|++|+|++|++++..+..+..+++|+.|+|++|++++..|.
T Consensus 180 l~L~ls~n~l~~~~~~~~~~~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 180 LSLDLSLNPMNFIQPGAFKEI-RLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp EEEECCSSCCCEECTTSSCSC-CEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred eeeecCCCcccccCccccCCC-cccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 89999999998887766654 899999999999977677788999999999999999987664
No 302
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.7e-25 Score=256.64 Aligned_cols=119 Identities=18% Similarity=0.196 Sum_probs=78.5
Q ss_pred ccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCc-ccccCCCCccEEEcccccccCCcchhhcCCC
Q 040398 130 DFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTF-PMLRNMTGLTRIILRNCNIAGEIPEYIWGIK 208 (732)
Q Consensus 130 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 208 (732)
..+..+++|+.|++++|.+++..+ .+..+++|+.|++++|.+....+ ..+..+++|++|+|++|.+.+..|..+..++
T Consensus 367 ~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 445 (570)
T 2z63_A 367 QSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445 (570)
T ss_dssp HHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT
T ss_pred ccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCC
Confidence 334556777888888888774433 37777777777777777766544 4567777777777777777766777777777
Q ss_pred CCcEEeCCCCcCc-ccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCC
Q 040398 209 NLRFLDLSFNQLT-GELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSP 263 (732)
Q Consensus 209 ~L~~L~Ls~N~l~-g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p 263 (732)
+|+.|+|++|.++ +.+|.. +..+++|+.|+|++|++++.+|
T Consensus 446 ~L~~L~l~~n~l~~~~~p~~--------------~~~l~~L~~L~l~~n~l~~~~~ 487 (570)
T 2z63_A 446 SLEVLKMAGNSFQENFLPDI--------------FTELRNLTFLDLSQCQLEQLSP 487 (570)
T ss_dssp TCCEEECTTCEEGGGEECSC--------------CTTCTTCCEEECTTSCCCEECT
T ss_pred cCcEEECcCCcCccccchhh--------------hhcccCCCEEECCCCccccCCh
Confidence 7777777777776 455543 3344555555555555555544
No 303
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=2.3e-26 Score=258.45 Aligned_cols=217 Identities=15% Similarity=0.134 Sum_probs=184.1
Q ss_pred CCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEE
Q 040398 15 NLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETL 93 (732)
Q Consensus 15 ~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 93 (732)
.+++|++|+|++|.+++..|..+..+ +|++|+|++|.+++..| ++.+++|++|+|++|.|++ +| ..++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~----~~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----VGPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE----ECTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC----CCCCcCEE
Confidence 34489999999999998878888888 79999999999986665 8999999999999999983 33 23889999
Q ss_pred eCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCcccc-CccCCCeeeccCcCC
Q 040398 94 RLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSIS-ALDKLNQLRISDLQG 172 (732)
Q Consensus 94 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ls~N~l 172 (732)
+|++|.|++..+. .+++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999865443 468899999999999988898999999999999999999988888876 789999999999999
Q ss_pred CCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEE
Q 040398 173 PNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLD 252 (732)
Q Consensus 173 ~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~Ld 252 (732)
++.+ .+..+++|+.|+|++|+|++ +|..+..+++|+.|+|++|.|++ +|.. +..+++|+.|+
T Consensus 182 ~~~~--~~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--------------l~~l~~L~~L~ 243 (487)
T 3oja_A 182 YDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKA--------------LRFSQNLEHFD 243 (487)
T ss_dssp CEEE--CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTT--------------CCCCTTCCEEE
T ss_pred cccc--ccccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchh--------------hccCCCCCEEE
Confidence 8773 34468999999999999996 55558899999999999999996 4543 45567899999
Q ss_pred ccCCcCc
Q 040398 253 LSYNNFT 259 (732)
Q Consensus 253 Ls~N~l~ 259 (732)
|++|+++
T Consensus 244 l~~N~l~ 250 (487)
T 3oja_A 244 LRGNGFH 250 (487)
T ss_dssp CTTCCBC
T ss_pred cCCCCCc
Confidence 9999887
No 304
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.3e-25 Score=257.57 Aligned_cols=251 Identities=17% Similarity=0.158 Sum_probs=194.6
Q ss_pred CCcccCCccCCCCCCCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCcc
Q 040398 4 SLPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRE 83 (732)
Q Consensus 4 ~~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 83 (732)
.+.+.+|+.+..+++|++|++++|.++ .+|..+...+|++|++++|.+. .+|. ..+++|++|++++|.+.+..+.
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~- 343 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE- 343 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC-
T ss_pred hhhhhchhhhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc-
Confidence 456778899999999999999999998 6777776669999999999998 7775 4678888888888887755554
Q ss_pred ccCCCCCCEEeCCCCcccccC--CccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCC-ccccCcc
Q 040398 84 LGNLVNLETLRLSSNRLIGNL--PMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIP-PSISALD 160 (732)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~ 160 (732)
..+++|+.|++++|++++.. |..+..+++|+.|++++|.+.+..+. +..+++|+.|++++|.+++..+ ..+..++
T Consensus 344 -~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 421 (570)
T 2z63_A 344 -VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 421 (570)
T ss_dssp -CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCT
T ss_pred -ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCC
Confidence 67788888888888887543 66777888888888888888755444 7888888888888888876655 4677888
Q ss_pred CCCeeeccCcCCCCCCcccccCCCCccEEEccccccc-CCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHH
Q 040398 161 KLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIA-GEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQIL 239 (732)
Q Consensus 161 ~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~ 239 (732)
+|+.|++++|.+....+..+..+++|++|+|++|.++ +.+|..+..+++|+.|+|++|++++.+|..
T Consensus 422 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~------------ 489 (570)
T 2z63_A 422 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA------------ 489 (570)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT------------
T ss_pred CCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhh------------
Confidence 8888888888888777777888888888888888886 467777888888888888888888776754
Q ss_pred HHHhccCCCCeEEccCCcCcCCCCCC-ccccCCCCcc
Q 040398 240 MFIRGVYEHQSLDLSYNNFTWQSPEQ-PACREKPNLN 275 (732)
Q Consensus 240 ~~~~~l~~L~~LdLs~N~l~~~~p~~-~~~~~~~~l~ 275 (732)
+.++++|+.|+|++|++++.+|.. ..|..+..|+
T Consensus 490 --~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 524 (570)
T 2z63_A 490 --FNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIW 524 (570)
T ss_dssp --TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred --hhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEE
Confidence 556677888888888888877753 3444444443
No 305
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.93 E-value=7.6e-25 Score=254.18 Aligned_cols=115 Identities=18% Similarity=0.280 Sum_probs=73.0
Q ss_pred ccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCC
Q 040398 11 PQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVN 89 (732)
Q Consensus 11 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 89 (732)
.+|.++++|++|+|++|+|++..|..|..+ +|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++
T Consensus 70 ~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~ 149 (635)
T 4g8a_A 70 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKT 149 (635)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTT
T ss_pred HHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcc
Confidence 356666666666666666665555566665 5666666666666444455666666666666666666444445666666
Q ss_pred CCEEeCCCCcccc-cCCccccCCCCCCEEEccCcccc
Q 040398 90 LETLRLSSNRLIG-NLPMELVKLKNLTDFRINDNNFN 125 (732)
Q Consensus 90 L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~ 125 (732)
|++|+|++|+|++ .+|..+..+++|+.|+|++|+|+
T Consensus 150 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 150 LKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp CCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred cCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 6777776666654 34556666666666666666554
No 306
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.93 E-value=7.6e-25 Score=254.17 Aligned_cols=145 Identities=17% Similarity=0.284 Sum_probs=128.2
Q ss_pred CCCCcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccC
Q 040398 2 LFSLPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTI 80 (732)
Q Consensus 2 l~~~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 80 (732)
|++||..|| +.+++|||++|+|++..|..|..+ +|++|+|++|+|++..|..|.++++|++|+|++|+|++..
T Consensus 43 l~~vP~~lp------~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~ 116 (635)
T 4g8a_A 43 FYKIPDNLP------FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 116 (635)
T ss_dssp CSSCCSSSC------TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred cCccCCCCC------cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCC
Confidence 566666666 468999999999997777889988 8999999999999777788999999999999999999655
Q ss_pred CccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccc-cCCccccCCCCCCEEEcccCCCcCcC
Q 040398 81 PRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNG-SAPDFIQSWTQLNRLEIQGSGLEGPI 152 (732)
Q Consensus 81 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~ 152 (732)
+..|.++++|++|+|++|+|++..+..|+++++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++..
T Consensus 117 ~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 189 (635)
T 4g8a_A 117 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 189 (635)
T ss_dssp GGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred HHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccc
Confidence 5689999999999999999997667779999999999999999975 46888999999999999999886543
No 307
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.5e-26 Score=243.85 Aligned_cols=220 Identities=15% Similarity=0.125 Sum_probs=182.0
Q ss_pred cCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCC
Q 040398 12 QIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNL 90 (732)
Q Consensus 12 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 90 (732)
.+..+++|++|+|++|++++..|..+..+ +|++|+|++|++++..+ +..+++|++|+|++|+|+ .++ ..++|
T Consensus 29 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~-~l~----~~~~L 101 (317)
T 3o53_A 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ-ELL----VGPSI 101 (317)
T ss_dssp HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEE-EEE----ECTTC
T ss_pred HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccc-ccc----CCCCc
Confidence 34556789999999999997777888888 79999999999986554 889999999999999988 333 34889
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccc-cCccCCCeeeccC
Q 040398 91 ETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSI-SALDKLNQLRISD 169 (732)
Q Consensus 91 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~ 169 (732)
++|++++|+|++..+. .+++|+.|++++|++++..+..+..+++|+.|+|++|.+++..+..+ ..+++|+.|++++
T Consensus 102 ~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~ 178 (317)
T 3o53_A 102 ETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178 (317)
T ss_dssp CEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTT
T ss_pred CEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCC
Confidence 9999999999865443 36789999999999998888889999999999999999997777766 4789999999999
Q ss_pred cCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCC
Q 040398 170 LQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQ 249 (732)
Q Consensus 170 N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~ 249 (732)
|.++..+ ....+++|++|+|++|+|++ +|..+..+++|+.|+|++|+|++ +|.. +..+++|+
T Consensus 179 N~l~~~~--~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~--------------~~~l~~L~ 240 (317)
T 3o53_A 179 NFIYDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKA--------------LRFSQNLE 240 (317)
T ss_dssp SCCCEEE--CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTT--------------CCCCTTCC
T ss_pred CcCcccc--cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhH--------------hhcCCCCC
Confidence 9988773 33458899999999999984 55568889999999999999984 4543 45667899
Q ss_pred eEEccCCcCc
Q 040398 250 SLDLSYNNFT 259 (732)
Q Consensus 250 ~LdLs~N~l~ 259 (732)
.|+|++|+++
T Consensus 241 ~L~l~~N~~~ 250 (317)
T 3o53_A 241 HFDLRGNGFH 250 (317)
T ss_dssp EEECTTCCCB
T ss_pred EEEccCCCcc
Confidence 9999999987
No 308
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=9.7e-25 Score=228.41 Aligned_cols=205 Identities=21% Similarity=0.271 Sum_probs=181.8
Q ss_pred cCCCCCCCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCC
Q 040398 12 QIVNLPYLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLE 91 (732)
Q Consensus 12 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 91 (732)
++.++++|++|++++|+++ .+|..+. .++++|+|++|++++..+..|.++++|++|+|++|.|++ ++.. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~-~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP-KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC-TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC-CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCC
Confidence 4778899999999999999 6666553 379999999999997778899999999999999999984 4433 7899999
Q ss_pred EEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcC
Q 040398 92 TLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 92 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 171 (732)
+|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999998 788889999999999999999998888889999999999999999997777778899999999999999
Q ss_pred CCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcc
Q 040398 172 GPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTG 222 (732)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 222 (732)
++.++...|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++..
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 99888888889999999999999998 788888888899999999999874
No 309
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2e-24 Score=223.58 Aligned_cols=202 Identities=21% Similarity=0.252 Sum_probs=133.9
Q ss_pred ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcc
Q 040398 41 QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIN 120 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 120 (732)
+++++++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+|+...+..+.++++|+.|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 3566666666666 4565443 466666776666664444466666667777777666664334445666677777777
Q ss_pred CccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCc
Q 040398 121 DNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEI 200 (732)
Q Consensus 121 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 200 (732)
+|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+..++...|..+++|++|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 77766555566666777777777777776665666667777777777777777666666777777777777777777655
Q ss_pred chhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCc
Q 040398 201 PEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFT 259 (732)
Q Consensus 201 p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~ 259 (732)
+..+..+++|+.|+|++|++++..+.. +..+++|+.|+|++|+++
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~--------------~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGA--------------FDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTT--------------TTTCTTCCEEECCSSCBC
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHH--------------hccccCCCEEEecCCCee
Confidence 556777777777777777777544432 445567777777777664
No 310
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.92 E-value=1.2e-24 Score=233.57 Aligned_cols=249 Identities=21% Similarity=0.331 Sum_probs=154.8
Q ss_pred CCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCC
Q 040398 9 LPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNL 87 (732)
Q Consensus 9 lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 87 (732)
+|+ +.++++|++|+|++|.++. +| .+..+ +|++|+|++|+++ .++. +..+++|++|++++|.....+ ..+..+
T Consensus 81 ~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~l~~n~~~~~~-~~~~~l 154 (347)
T 4fmz_A 81 ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNIS-DISP-LANLTKMYSLNLGANHNLSDL-SPLSNM 154 (347)
T ss_dssp CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCC-CCGG-GTTCTTCCEEECTTCTTCCCC-GGGTTC
T ss_pred chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCccc-Cchh-hccCCceeEEECCCCCCcccc-cchhhC
Confidence 444 8888899999999998884 44 46666 7899999988888 4444 778888888888888655333 347777
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeec
Q 040398 88 VNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRI 167 (732)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 167 (732)
++|++|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++
T Consensus 155 ~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l 228 (347)
T 4fmz_A 155 TGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI 228 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEc
Confidence 888888888887773322 6777777777777777764332 5566666666666666653322 555666666666
Q ss_pred cCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcch--------h-hHH
Q 040398 168 SDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLK--------F-TQI 238 (732)
Q Consensus 168 s~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~--------~-~~~ 238 (732)
++|.+..... +..+++|++|+|++|.+++ + ..+..+++|+.|++++|++++. |.......+. . ...
T Consensus 229 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 229 GNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGG
T ss_pred cCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcC
Confidence 6666655443 5555666666666666653 2 2355556666666666655542 2100000000 0 111
Q ss_pred HHHHhccCCCCeEEccCCcCcCCCCCCccccCCCCcc
Q 040398 239 LMFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLN 275 (732)
Q Consensus 239 ~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~ 275 (732)
+..+.++++|+.|+|++|++++.+| ...+..+..|+
T Consensus 304 ~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~ 339 (347)
T 4fmz_A 304 MEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSAD 339 (347)
T ss_dssp HHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEES
T ss_pred hhHhhccccCCEEEccCCccccccC-hhhhhccceee
Confidence 2336667777777777777777666 44444444444
No 311
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.92 E-value=1.7e-24 Score=241.14 Aligned_cols=221 Identities=20% Similarity=0.199 Sum_probs=182.1
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCcc
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRE 83 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 83 (732)
..+..+..++++++|++|+|++|.+++ +| .+..+ +|++|+|++|++++ +| ++.+++|++|+|++|+|++ ++
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--
T ss_pred cCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--
Confidence 445566788889999999999999995 45 56666 79999999999995 44 8899999999999999985 44
Q ss_pred ccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCC
Q 040398 84 LGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLN 163 (732)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 163 (732)
++++++|++|+|++|++++ +| +..+++|+.|++++|++++. + ++.+++|+.|++++|...+.+ .+..+++|+
T Consensus 102 ~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~ 173 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLT 173 (457)
T ss_dssp CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCC
T ss_pred cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCC
Confidence 8899999999999999985 44 88899999999999999864 3 788899999999999665555 477888999
Q ss_pred eeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHh
Q 040398 164 QLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIR 243 (732)
Q Consensus 164 ~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~ 243 (732)
.|++++|.+++++ +..+++|+.|+|++|++++. .+..+++|+.|+|++|++++ +| ++
T Consensus 174 ~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip----------------~~ 230 (457)
T 3bz5_A 174 TLDCSFNKITELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID----------------VT 230 (457)
T ss_dssp EEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC----------------CT
T ss_pred EEECCCCccceec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC----------------cc
Confidence 9999999988865 77788899999999998864 37788899999999999887 44 23
Q ss_pred ccCCCCeEEccCCcCcCCCCC
Q 040398 244 GVYEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 244 ~l~~L~~LdLs~N~l~~~~p~ 264 (732)
.+++|+.|++++|+|++.++.
T Consensus 231 ~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 231 PLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp TCTTCSEEECCSSCCSCCCCT
T ss_pred ccCCCCEEEeeCCcCCCcCHH
Confidence 457888889999988887643
No 312
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.8e-24 Score=222.55 Aligned_cols=206 Identities=22% Similarity=0.249 Sum_probs=185.5
Q ss_pred CCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCC
Q 040398 18 YLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSS 97 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 97 (732)
.++.+++++++++ .+|..+. .+|++|+|++|++++..+..|.++++|++|+|++|.++...+..|.++++|++|+|++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~-~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP-ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC-TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCCEEEccCCCCC-ccCCCCC-CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 5789999999999 6776554 3799999999999966667899999999999999999954445678999999999999
Q ss_pred CcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCc
Q 040398 98 NRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTF 177 (732)
Q Consensus 98 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~ 177 (732)
|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..+..+++|+.|+|++|.+..++.
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 99997666778999999999999999998888889999999999999999997777779999999999999999999999
Q ss_pred ccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCC
Q 040398 178 PMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELP 225 (732)
Q Consensus 178 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 225 (732)
..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|++...-+
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 899999999999999999997777778899999999999999986544
No 313
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.92 E-value=3.2e-24 Score=238.95 Aligned_cols=239 Identities=19% Similarity=0.203 Sum_probs=196.1
Q ss_pred CcccCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCcc
Q 040398 5 LPGTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRE 83 (732)
Q Consensus 5 ~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 83 (732)
+++ +| .+.++++|++|+|++|++++ +| +..+ +|++|+|++|++++ ++ ++++++|++|+|++|++++ +|
T Consensus 54 l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~-l~-- 122 (457)
T 3bz5_A 54 ITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTK-LD-- 122 (457)
T ss_dssp CCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSC-CC--
T ss_pred ccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCe-ec--
Confidence 444 45 79999999999999999996 44 6666 79999999999996 44 8999999999999999995 55
Q ss_pred ccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCC
Q 040398 84 LGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLN 163 (732)
Q Consensus 84 l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 163 (732)
++.+++|++|++++|+|++ ++ +..+++|+.|++++|...+.+ .+..+++|+.|++++|++++ +| +..+++|+
T Consensus 123 ~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~ 194 (457)
T 3bz5_A 123 VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLN 194 (457)
T ss_dssp CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCC
T ss_pred CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCC
Confidence 8999999999999999996 43 889999999999999766566 48899999999999999996 45 88999999
Q ss_pred eeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHh
Q 040398 164 QLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIR 243 (732)
Q Consensus 164 ~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~ 243 (732)
.|++++|.+++. .+..+++|++|+|++|++++ +| +..+++|+.|++++|++++..+... ..+... .-
T Consensus 195 ~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l--~~L~~L-----~l 261 (457)
T 3bz5_A 195 RLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTL--SKLTTL-----HC 261 (457)
T ss_dssp EEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTC--TTCCEE-----EC
T ss_pred EEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHC--CCCCEE-----ec
Confidence 999999999987 37889999999999999997 66 8899999999999999998754321 111100 00
Q ss_pred ccCCCCeEEccCCcCcCCCCCCccccCCCCccc
Q 040398 244 GVYEHQSLDLSYNNFTWQSPEQPACREKPNLNL 276 (732)
Q Consensus 244 ~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~~ 276 (732)
...+|+.|++++|++.+.+|. ..|..+..|++
T Consensus 262 ~~n~L~~L~l~~n~~~~~~~~-~~l~~L~~L~L 293 (457)
T 3bz5_A 262 IQTDLLEIDLTHNTQLIYFQA-EGCRKIKELDV 293 (457)
T ss_dssp TTCCCSCCCCTTCTTCCEEEC-TTCTTCCCCCC
T ss_pred cCCCCCEEECCCCccCCcccc-cccccCCEEEC
Confidence 113677888888888777763 45666666654
No 314
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.92 E-value=3.2e-24 Score=230.31 Aligned_cols=221 Identities=24% Similarity=0.365 Sum_probs=150.8
Q ss_pred ccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCcc----------
Q 040398 11 PQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGT---------- 79 (732)
Q Consensus 11 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~---------- 79 (732)
+.+.++++|++|+|++|.+++ ++. +..+ +|++|++++|.....+ ..+..+++|++|++++|.+.+.
T Consensus 104 ~~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~ 180 (347)
T 4fmz_A 104 SALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTPIANLTDLY 180 (347)
T ss_dssp GGGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGGGGGCTTCS
T ss_pred hHHcCCCcCCEEECcCCcccC-chh-hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchhhccCCCCC
Confidence 357778888888888887774 333 4444 5666666666444222 2255555555555555555422
Q ss_pred -----------CCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCC
Q 040398 80 -----------IPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGL 148 (732)
Q Consensus 80 -----------~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 148 (732)
++. +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+
T Consensus 181 ~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 255 (347)
T 4fmz_A 181 SLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI 255 (347)
T ss_dssp EEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEEccCCccccccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCcc
Confidence 221 4444444444444444442222 6667777777777777764433 77788888888888888
Q ss_pred cCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCC
Q 040398 149 EGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVA 228 (732)
Q Consensus 149 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~ 228 (732)
++. ..+..+++|+.|++++|.+... +.+..+++|+.|+|++|++++..|..+..+++|+.|+|++|++++.+|
T Consensus 256 ~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--- 328 (347)
T 4fmz_A 256 SDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--- 328 (347)
T ss_dssp CCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG---
T ss_pred CCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC---
Confidence 743 4677888888888888888776 457888889999999999988888888889999999999999887655
Q ss_pred ccCcchhhHHHHHHhccCCCCeEEccCCcCc
Q 040398 229 VPADLKFTQILMFIRGVYEHQSLDLSYNNFT 259 (732)
Q Consensus 229 ~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~ 259 (732)
+..+++|+.||+++|+|+
T Consensus 329 -------------~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 329 -------------LASLSKMDSADFANQVIK 346 (347)
T ss_dssp -------------GGGCTTCSEESSSCC---
T ss_pred -------------hhhhhccceeehhhhccc
Confidence 456789999999999985
No 315
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=8.1e-25 Score=226.89 Aligned_cols=221 Identities=17% Similarity=0.176 Sum_probs=176.6
Q ss_pred CCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCC
Q 040398 18 YLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLS 96 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 96 (732)
++..+++..+.+.... ....+ +|++|++++|.++ .++ .+..+++|++|+|++|.+++ + ..+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECC
Confidence 3445566666665332 23334 6888888888887 343 47888889999999988884 3 478888889999999
Q ss_pred CCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCC
Q 040398 97 SNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQT 176 (732)
Q Consensus 97 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 176 (732)
+|++++..+..+.++++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+..+..+++|+.|++++|.+++.+
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 173 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLP 173 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccC
Confidence 99888766667888889999999999988777777888889999999999888777777888889999999999888888
Q ss_pred cccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCC
Q 040398 177 FPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYN 256 (732)
Q Consensus 177 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N 256 (732)
+..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++.+..| +|+.|+++.|
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~---------------------~l~~l~~~~n 232 (272)
T 3rfs_A 174 EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP---------------------GIRYLSEWIN 232 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT---------------------TTHHHHHHHH
T ss_pred HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc---------------------HHHHHHHHHH
Confidence 8888888899999999999988777778888999999999998886655 3567888888
Q ss_pred cCcCCCCCC
Q 040398 257 NFTWQSPEQ 265 (732)
Q Consensus 257 ~l~~~~p~~ 265 (732)
+++|.+|..
T Consensus 233 ~~~g~ip~~ 241 (272)
T 3rfs_A 233 KHSGVVRNS 241 (272)
T ss_dssp HTGGGBBCT
T ss_pred hCCCcccCc
Confidence 888888753
No 316
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.92 E-value=5.9e-24 Score=237.96 Aligned_cols=196 Identities=29% Similarity=0.383 Sum_probs=129.5
Q ss_pred CCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCC
Q 040398 13 IVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLE 91 (732)
Q Consensus 13 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 91 (732)
+..+++|++|+|++|.+++..| +..+ +|++|+|++|++++. +. ++++++|++|+|++|.+++ ++. +.++++|+
T Consensus 64 ~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~ 137 (466)
T 1o6v_A 64 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI-TP-LANLTNLTGLTLFNNQITD-IDP-LKNLTNLN 137 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCS
T ss_pred hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccC-hh-hcCCCCCCEEECCCCCCCC-ChH-HcCCCCCC
Confidence 6777788888888888774433 5555 677888877777743 33 7777777777777777773 332 66777777
Q ss_pred EEeCCCCcccccCC--------------------ccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCc
Q 040398 92 TLRLSSNRLIGNLP--------------------MELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGP 151 (732)
Q Consensus 92 ~L~L~~N~l~~~~p--------------------~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 151 (732)
+|+|++|.+++ ++ ..+.++++|+.|++++|.+++. ..+..+++|+.|++++|.+++.
T Consensus 138 ~L~l~~n~l~~-~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 138 RLELSSNTISD-ISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEEEEEEECC-CGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred EEECCCCccCC-ChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 77777776653 22 1255667777777777777643 2366777777777777777654
Q ss_pred CCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc
Q 040398 152 IPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 152 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
.| +..+++|+.|++++|.+... +.+..+++|++|+|++|.+++..+ +..+++|+.|++++|++++.
T Consensus 215 ~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 280 (466)
T 1o6v_A 215 TP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI 280 (466)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC
T ss_pred cc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc
Confidence 44 55666777777777766654 345666666666666666664443 55666666666666666654
No 317
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=1.9e-25 Score=253.42 Aligned_cols=184 Identities=16% Similarity=0.185 Sum_probs=145.5
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEcccccc--------cchHHHHHHHHHHhcCCCCceeeeeeeEEeCCEEEEEE
Q 040398 518 PMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSR--------QGNREFLNEIGTISCLQHPNLVKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 518 ~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 589 (732)
..+.||+|+||.||+|+.. ++.+|+|+...... ...+++.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 3568999999999999544 67888887543211 11345899999999999999997777777888889999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
||+++++|.+++.. +..++.||++||+|||+++ |+||||||+|||+++ .+||+|||+++....
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999843 5689999999999999996 999999999999999 999999999987755
Q ss_pred cCcee------eecccCccccccchhccc--CCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 670 EKTHI------STRVAGTIGYMAPEYALW--GYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 670 ~~~~~------~~~~~gt~~y~APE~~~~--~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
..... .....||+.|||||++.. ..|+..+|+||..+-.++-+.++.++.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 32211 234679999999999986 567788999999999888887776653
No 318
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.91 E-value=1.1e-23 Score=235.75 Aligned_cols=220 Identities=30% Similarity=0.440 Sum_probs=148.7
Q ss_pred CCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCC----------
Q 040398 13 IVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIP---------- 81 (732)
Q Consensus 13 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p---------- 81 (732)
+.++++|++|+|++|.+++..+ +..+ +|++|+|++|++++ ++. +.++++|++|+|++|.+++ ++
T Consensus 86 ~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~ 160 (466)
T 1o6v_A 86 LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITD-IDP-LKNLTNLNRLELSSNTISD-ISALSGLTSLQQ 160 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CGG-GTTCTTCSEEEEEEEEECC-CGGGTTCTTCSE
T ss_pred hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCC-ChH-HcCCCCCCEEECCCCccCC-ChhhccCCcccE
Confidence 7777788888888887775443 5555 67777777777773 333 6777777777777777663 22
Q ss_pred ----------ccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCc
Q 040398 82 ----------RELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGP 151 (732)
Q Consensus 82 ----------~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 151 (732)
..+.++++|+.|++++|++++ ++ .+..+++|+.|++++|.+++..| ++.+++|+.|++++|++++.
T Consensus 161 L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 236 (466)
T 1o6v_A 161 LSFGNQVTDLKPLANLTTLERLDISSNKVSD-IS-VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI 236 (466)
T ss_dssp EEEEESCCCCGGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred eecCCcccCchhhccCCCCCEEECcCCcCCC-Ch-hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc
Confidence 125667788888888888873 33 47778888888888888876554 66677777777777777642
Q ss_pred CCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccC
Q 040398 152 IPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPA 231 (732)
Q Consensus 152 ~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~ 231 (732)
..+..+++|+.|++++|.+.+..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++..|
T Consensus 237 --~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~------ 304 (466)
T 1o6v_A 237 --GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP------ 304 (466)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG------
T ss_pred --hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh------
Confidence 356677777777777777766554 6667777777777777775433 6667777777777777765433
Q ss_pred cchhhHHHHHHhccCCCCeEEccCCcCcCCCC
Q 040398 232 DLKFTQILMFIRGVYEHQSLDLSYNNFTWQSP 263 (732)
Q Consensus 232 ~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p 263 (732)
+..+++|+.|+|++|++++.+|
T Consensus 305 ----------~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 305 ----------ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp ----------GGGCTTCSEEECCSSCCSCCGG
T ss_pred ----------hcCCCCCCEEECcCCcCCCchh
Confidence 2344455555555555555444
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.91 E-value=3.5e-25 Score=234.98 Aligned_cols=232 Identities=17% Similarity=0.136 Sum_probs=192.9
Q ss_pred CCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCC
Q 040398 18 YLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLS 96 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~ 96 (732)
.++.++++.+.+...+...+... +|++|+|++|++++..|..+.++++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 46667777887775555555555 79999999999997777899999999999999999986554 9999999999999
Q ss_pred CCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCC
Q 040398 97 SNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQT 176 (732)
Q Consensus 97 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 176 (732)
+|+|++ + ..+++|+.|++++|++++..+.. +++|+.|++++|++++..+..+..+++|+.|++++|.+....
T Consensus 89 ~n~l~~-l----~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQE-L----LVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEE-E----EECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccc-c----cCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 999984 2 24589999999999998765543 688999999999999888889999999999999999999987
Q ss_pred cccc-cCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccC
Q 040398 177 FPML-RNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSY 255 (732)
Q Consensus 177 ~~~l-~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~ 255 (732)
+..+ ..+++|++|+|++|.|++. +. ...+++|+.|+|++|++++.++. +..+++|+.|+|++
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~---------------~~~l~~L~~L~L~~ 223 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE---------------FQSAAGVTWISLRN 223 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG---------------GGGGTTCSEEECTT
T ss_pred HHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhh---------------hcccCcccEEECcC
Confidence 7766 4789999999999999954 43 33599999999999999965443 55678999999999
Q ss_pred CcCcCCCCCCccccCCCCccc
Q 040398 256 NNFTWQSPEQPACREKPNLNL 276 (732)
Q Consensus 256 N~l~~~~p~~~~~~~~~~l~~ 276 (732)
|+|+..++....+..+..|++
T Consensus 224 N~l~~l~~~~~~l~~L~~L~l 244 (317)
T 3o53_A 224 NKLVLIEKALRFSQNLEHFDL 244 (317)
T ss_dssp SCCCEECTTCCCCTTCCEEEC
T ss_pred CcccchhhHhhcCCCCCEEEc
Confidence 999987665555555555543
No 320
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.2e-23 Score=220.16 Aligned_cols=202 Identities=20% Similarity=0.176 Sum_probs=179.4
Q ss_pred cccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCC
Q 040398 37 WASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLT 115 (732)
Q Consensus 37 ~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 115 (732)
+..+ +++++++++|+++ .+|..+. ++|++|+|++|.|++..+..|.++++|+.|+|++|+|++. +.. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCC
Confidence 4444 7999999999999 7887775 7999999999999977788999999999999999999954 433 7899999
Q ss_pred EEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEccccc
Q 040398 116 DFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCN 195 (732)
Q Consensus 116 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 195 (732)
.|+|++|+|+ .+|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++..++...|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999998 788889999999999999999997778889999999999999999999999999999999999999999
Q ss_pred ccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCc
Q 040398 196 IAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFT 259 (732)
Q Consensus 196 l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~ 259 (732)
|++..+..+..+++|+.|+|++|+|+ .+|.. +..+.+|+.|+|++|++.
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~--------------~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKG--------------FFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTT--------------TTTTCCCSEEECCSCCBC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChh--------------hcccccCCeEEeCCCCcc
Confidence 99666667788999999999999999 55543 334568999999999775
No 321
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3e-24 Score=222.60 Aligned_cols=205 Identities=22% Similarity=0.267 Sum_probs=185.7
Q ss_pred cCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCC
Q 040398 12 QIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNL 90 (732)
Q Consensus 12 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 90 (732)
.+.++++|+.|++++|.++ .++. +..+ +|++|+|++|++++ + ..+..+++|++|+|++|.+++..+..+.++++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~-~~~~-l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIK-SVQG-IQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCC-CCTT-GGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCcc-cccc-cccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 4567889999999999998 4443 5556 89999999999995 3 479999999999999999997777778999999
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCc
Q 040398 91 ETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDL 170 (732)
Q Consensus 91 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 170 (732)
++|+|++|++++..+..+..+++|+.|++++|++++..+..+..+++|+.|+|++|++++..+..+..+++|+.|++++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 99999999999777777899999999999999999888888999999999999999999887888899999999999999
Q ss_pred CCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCC
Q 040398 171 QGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDV 227 (732)
Q Consensus 171 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 227 (732)
.+.+..+..+..+++|++|+|++|.+.+ .+++|+.|+++.|.++|.+|..
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCT
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCc
Confidence 9999999889999999999999999985 4567999999999999999975
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=1.7e-24 Score=243.23 Aligned_cols=208 Identities=17% Similarity=0.134 Sum_probs=180.0
Q ss_pred ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcc
Q 040398 41 QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIN 120 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 120 (732)
+|++|+|++|++++..|..|+.+++|++|+|++|.|++..| +..+++|++|+|++|.|++. | ..++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEE-E----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCC-C----CCCCcCEEECc
Confidence 69999999999998778899999999999999999996655 99999999999999999843 2 34899999999
Q ss_pred CccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCccccc-CCCCccEEEcccccccCC
Q 040398 121 DNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLR-NMTGLTRIILRNCNIAGE 199 (732)
Q Consensus 121 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~-~l~~L~~L~Ls~N~l~~~ 199 (732)
+|.|++..+. .+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++..+..+. .+++|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 9999976654 468899999999999998899999999999999999999998877775 799999999999999965
Q ss_pred cchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCCCccccCCCCcc
Q 040398 200 IPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLN 275 (732)
Q Consensus 200 ~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~ 275 (732)
|. +..+++|+.|+|++|+|++.+|. +..+++|+.|||++|+|++.++....+..+..|+
T Consensus 185 -~~-~~~l~~L~~L~Ls~N~l~~~~~~---------------~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~ 243 (487)
T 3oja_A 185 -KG-QVVFAKLKTLDLSSNKLAFMGPE---------------FQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFD 243 (487)
T ss_dssp -EC-CCCCTTCCEEECCSSCCCEECGG---------------GGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEE
T ss_pred -cc-cccCCCCCEEECCCCCCCCCCHh---------------HcCCCCccEEEecCCcCcccchhhccCCCCCEEE
Confidence 33 34699999999999999976553 5567899999999999998776655555444444
No 323
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5e-24 Score=225.33 Aligned_cols=222 Identities=18% Similarity=0.188 Sum_probs=154.4
Q ss_pred CCCEEEcccCcCccccC----ccccccccceEecccccccccCCccc--cCCCCCCEEecccccCCccCC----ccccCC
Q 040398 18 YLETVDFAYNYLHGSIP----REWASMQLKYISVFANRLSGNIPSHL--GNITSLTYLDLEENQFSGTIP----RELGNL 87 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p----~~~~~~~L~~L~L~~n~l~~~~p~~l--~~l~~L~~L~Ls~N~l~~~~p----~~l~~l 87 (732)
.++.|.+.++.++...- ..+...+|++|+|++|++.+..|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 46777777776653211 11111258888888888887777777 778888888888888876544 344567
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCCEEEccCcccccc--C--CccccCCCCCCEEEcccCCCcCcCCc----cccCc
Q 040398 88 VNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGS--A--PDFIQSWTQLNRLEIQGSGLEGPIPP----SISAL 159 (732)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l 159 (732)
++|++|+|++|++++..|..+..+++|+.|+|++|++.+. + +..+..+++|++|+|++|+++ .++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 7888888888888766677777888888888888877542 1 233467788888888888886 2222 24667
Q ss_pred cCCCeeeccCcCCCCCCcccccCC---CCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhh
Q 040398 160 DKLNQLRISDLQGPNQTFPMLRNM---TGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFT 236 (732)
Q Consensus 160 ~~L~~L~ls~N~l~~~~~~~l~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~ 236 (732)
++|++|+|++|.+.+..+..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~---------- 289 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ---------- 289 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC----------
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch----------
Confidence 788888888888877765555554 57888888888887 6676553 6888888888888753 21
Q ss_pred HHHHHHhccCCCCeEEccCCcCc
Q 040398 237 QILMFIRGVYEHQSLDLSYNNFT 259 (732)
Q Consensus 237 ~~~~~~~~l~~L~~LdLs~N~l~ 259 (732)
+..+++|+.|+|++|+|+
T Consensus 290 -----~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 290 -----PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp -----TTSCCCCSCEECSSTTTS
T ss_pred -----hhhCCCccEEECcCCCCC
Confidence 224467788888888775
No 324
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=1.3e-25 Score=244.97 Aligned_cols=246 Identities=19% Similarity=0.223 Sum_probs=198.9
Q ss_pred cCCccCCCCCCCCEEEcccCcCccccCcc----cccc-ccceEecccc---cccccCCccc-------cCCCCCCEEecc
Q 040398 8 TLPPQIVNLPYLETVDFAYNYLHGSIPRE----WASM-QLKYISVFAN---RLSGNIPSHL-------GNITSLTYLDLE 72 (732)
Q Consensus 8 ~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~----~~~~-~L~~L~L~~n---~l~~~~p~~l-------~~l~~L~~L~Ls 72 (732)
.++..+.++++|++|+|++|.++...+.. +..+ +|++|+|++| ++.+.+|..+ .++++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 46778889999999999999999765544 4455 7999999995 5556667655 789999999999
Q ss_pred cccCCc----cCCccccCCCCCCEEeCCCCcccccCCcc----ccCC---------CCCCEEEccCcccc-ccCC---cc
Q 040398 73 ENQFSG----TIPRELGNLVNLETLRLSSNRLIGNLPME----LVKL---------KNLTDFRINDNNFN-GSAP---DF 131 (732)
Q Consensus 73 ~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~----l~~l---------~~L~~L~L~~N~l~-~~~p---~~ 131 (732)
+|.+++ .+|..+..+++|++|+|++|.|++..+.. +..+ ++|+.|+|++|+++ +.++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 999996 47888899999999999999997544433 4444 89999999999997 4455 46
Q ss_pred ccCCCCCCEEEcccCCCc--C---cCCccccCccCCCeeeccCcCCC----CCCcccccCCCCccEEEcccccccCC---
Q 040398 132 IQSWTQLNRLEIQGSGLE--G---PIPPSISALDKLNQLRISDLQGP----NQTFPMLRNMTGLTRIILRNCNIAGE--- 199 (732)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~ls~N~l~----~~~~~~l~~l~~L~~L~Ls~N~l~~~--- 199 (732)
+..+++|+.|+|++|+++ | ..+..+..+++|+.|+|++|.++ ...+..+..+++|++|+|++|.|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 778999999999999998 3 34558899999999999999986 33455688899999999999999876
Q ss_pred -cchhhcC--CCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHH-hccCCCCeEEccCCcCcCCCC
Q 040398 200 -IPEYIWG--IKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFI-RGVYEHQSLDLSYNNFTWQSP 263 (732)
Q Consensus 200 -~p~~l~~--l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~-~~l~~L~~LdLs~N~l~~~~p 263 (732)
++..+.. +++|+.|+|++|.+++. ....++..+ .++++|+.|+|++|++++..+
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~----------g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELD----------AVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHH----------HHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHH----------HHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 5677744 99999999999999852 011233334 668999999999999986653
No 325
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.6e-23 Score=212.70 Aligned_cols=206 Identities=14% Similarity=0.128 Sum_probs=143.7
Q ss_pred cCccccCccccccccceEecccccccccCCccccCCCCCCEEeccccc-CCccCCccccCCCCCCEEeCCC-CcccccCC
Q 040398 28 YLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQ-FSGTIPRELGNLVNLETLRLSS-NRLIGNLP 105 (732)
Q Consensus 28 ~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p 105 (732)
.++ .+|. +.. +|++|+|++|++++..+..+.++++|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+
T Consensus 22 ~l~-~ip~-~~~-~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~ 98 (239)
T 2xwt_C 22 DIQ-RIPS-LPP-STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDP 98 (239)
T ss_dssp SCS-SCCC-CCT-TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECT
T ss_pred Ccc-ccCC-CCC-cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCH
Confidence 354 5555 222 67778888888775555577777888888888876 7644444677777888888877 77775555
Q ss_pred ccccCCCCCCEEEccCccccccCCccccCCCCCC---EEEcccC-CCcCcCCccccCccCCC-eeeccCcCCCCCCcccc
Q 040398 106 MELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLN---RLEIQGS-GLEGPIPPSISALDKLN-QLRISDLQGPNQTFPML 180 (732)
Q Consensus 106 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~ls~N~l~~~~~~~l 180 (732)
..|.++++|+.|++++|++++ +|. +..+++|+ .|++++| ++++..+..|..+++|+ .|++++|.++.++...+
T Consensus 99 ~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~ 176 (239)
T 2xwt_C 99 DALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAF 176 (239)
T ss_dssp TSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTT
T ss_pred HHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhc
Confidence 677777788888888887775 555 77777777 7788877 77765566677777777 77777777776666556
Q ss_pred cCCCCccEEEccccc-ccCCcchhhcCC-CCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCC
Q 040398 181 RNMTGLTRIILRNCN-IAGEIPEYIWGI-KNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYN 256 (732)
Q Consensus 181 ~~l~~L~~L~Ls~N~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N 256 (732)
.. ++|++|+|++|+ +++..+..+..+ ++|+.|+|++|++++..+. .+.+|+.|++++|
T Consensus 177 ~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~-----------------~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 177 NG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK-----------------GLEHLKELIARNT 236 (239)
T ss_dssp TT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT-----------------TCTTCSEEECTTC
T ss_pred CC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh-----------------HhccCceeeccCc
Confidence 55 677788888874 775555667777 7788888888877743332 2356677777665
No 326
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=1.2e-22 Score=207.85 Aligned_cols=183 Identities=19% Similarity=0.195 Sum_probs=151.1
Q ss_pred ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcc
Q 040398 41 QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIN 120 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 120 (732)
..++++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|+|++..|..+..+++|+.|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4677888888888 6776665 578888888888887667778888888888888888887777778888888888888
Q ss_pred CccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCc
Q 040398 121 DNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEI 200 (732)
Q Consensus 121 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 200 (732)
+|+|++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+..+++..|..+++|++|+|++|+|++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 88888777777888888888888888888666666788888888888888888888878888889999999999999777
Q ss_pred chhhcCCCCCcEEeCCCCcCcccCCC
Q 040398 201 PEYIWGIKNLRFLDLSFNQLTGELPD 226 (732)
Q Consensus 201 p~~l~~l~~L~~L~Ls~N~l~g~~p~ 226 (732)
+..+..+++|+.|+|++|++++..++
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~~~~ 197 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCSRCE 197 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTTSTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCCccc
Confidence 77888899999999999999876543
No 327
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.89 E-value=3.3e-23 Score=230.59 Aligned_cols=215 Identities=18% Similarity=0.189 Sum_probs=113.3
Q ss_pred ccCCccCCCCCCCCEEEcccCcCccccCcccccc-c-------------cceEecccccccccCCccccCCCCCCEEecc
Q 040398 7 GTLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-Q-------------LKYISVFANRLSGNIPSHLGNITSLTYLDLE 72 (732)
Q Consensus 7 g~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~-------------L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 72 (732)
|+||++|++|++|++|++++|.+.+.+|..++.+ + +++|++++|+++ .+|.. .++|++|+|+
T Consensus 24 ~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp~~---~~~L~~L~l~ 99 (454)
T 1jl5_A 24 TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPEL---PPHLESLVAS 99 (454)
T ss_dssp ----------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCCSC---CTTCSEEECC
T ss_pred hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCCCC---cCCCCEEEcc
Confidence 5666666666666666666666666666666554 2 266666666666 34432 2456666666
Q ss_pred cccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcC
Q 040398 73 ENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPI 152 (732)
Q Consensus 73 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 152 (732)
+|.+++ +|.. +++|+.|++++|++++ +|.. .++|++|++++|++++ +| .++++++|++|++++|++++ +
T Consensus 100 ~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-l 168 (454)
T 1jl5_A 100 CNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-L 168 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-C
T ss_pred CCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-c
Confidence 666663 4532 2455666666665552 2221 1456666666666654 44 35566666666666666653 3
Q ss_pred CccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCc
Q 040398 153 PPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPAD 232 (732)
Q Consensus 153 p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~ 232 (732)
|..+ ++|++|++++|.+.+++ .+..+++|++|++++|++++ +|.. .++|+.|++++|+++ .+|+
T Consensus 169 p~~~---~~L~~L~L~~n~l~~l~--~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp~------ 232 (454)
T 1jl5_A 169 PDLP---PSLEFIAAGNNQLEELP--ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELPE------ 232 (454)
T ss_dssp CCCC---TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCCC------
T ss_pred CCCc---ccccEEECcCCcCCcCc--cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-cccc------
Confidence 4322 35566666666555532 35555666666666666553 3332 135555566655555 3442
Q ss_pred chhhHHHHHHhccCCCCeEEccCCcCcCC
Q 040398 233 LKFTQILMFIRGVYEHQSLDLSYNNFTWQ 261 (732)
Q Consensus 233 l~~~~~~~~~~~l~~L~~LdLs~N~l~~~ 261 (732)
++++++|+.|++++|++++.
T Consensus 233 ---------~~~l~~L~~L~l~~N~l~~l 252 (454)
T 1jl5_A 233 ---------LQNLPFLTTIYADNNLLKTL 252 (454)
T ss_dssp ---------CTTCTTCCEEECCSSCCSSC
T ss_pred ---------cCCCCCCCEEECCCCcCCcc
Confidence 34456667777777776654
No 328
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.6e-23 Score=210.08 Aligned_cols=196 Identities=15% Similarity=0.170 Sum_probs=172.8
Q ss_pred CCCEEEcccCcCccccCcccccc-ccceEeccccc-ccccCCccccCCCCCCEEeccc-ccCCccCCccccCCCCCCEEe
Q 040398 18 YLETVDFAYNYLHGSIPREWASM-QLKYISVFANR-LSGNIPSHLGNITSLTYLDLEE-NQFSGTIPRELGNLVNLETLR 94 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~ 94 (732)
+|++|+|++|++++..+..|..+ +|++|+|++|+ ++...+..|.++++|++|+|++ |+|++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 79999999999997777788888 89999999997 8855566899999999999999 999966667899999999999
Q ss_pred CCCCcccccCCccccCCCCCC---EEEccCc-cccccCCccccCCCCCC-EEEcccCCCcCcCCccccCccCCCeeeccC
Q 040398 95 LSSNRLIGNLPMELVKLKNLT---DFRINDN-NFNGSAPDFIQSWTQLN-RLEIQGSGLEGPIPPSISALDKLNQLRISD 169 (732)
Q Consensus 95 L~~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 169 (732)
|++|++++ +|. +..+++|+ .|++++| ++++..+..|..+++|+ .|++++|+++ .+|......++|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 99999995 776 88899998 9999999 99988888899999999 9999999999 5555444448999999999
Q ss_pred cC-CCCCCcccccCC-CCccEEEcccccccCCcchhhcCCCCCcEEeCCCCc
Q 040398 170 LQ-GPNQTFPMLRNM-TGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQ 219 (732)
Q Consensus 170 N~-l~~~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 219 (732)
|+ ++.++...|..+ ++|+.|+|++|+|+ .+|.. .+++|+.|+++++.
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTTC-
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccCcc
Confidence 95 999888899999 99999999999999 45554 68899999998863
No 329
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.8e-22 Score=206.47 Aligned_cols=182 Identities=19% Similarity=0.193 Sum_probs=167.3
Q ss_pred CCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEc
Q 040398 64 TSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEI 143 (732)
Q Consensus 64 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 143 (732)
.+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..+.++++|+.|+|++|.|++..+..|..+++|+.|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 46789999999999 8888776 68999999999999888888999999999999999999988899999999999999
Q ss_pred ccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc
Q 040398 144 QGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 144 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
++|++++..+..+..+++|+.|+|++|.++.++...|..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999987788899999999999999999999998899999999999999999977777899999999999999999977
Q ss_pred CCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCC
Q 040398 224 LPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQS 262 (732)
Q Consensus 224 ~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~ 262 (732)
+|.. +.++++|+.|+|++|++++..
T Consensus 171 ~~~~--------------~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 171 PHGA--------------FDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CTTT--------------TTTCTTCCEEECCSCCBCTTS
T ss_pred CHHH--------------HhCCCCCCEEEeeCCceeCCc
Confidence 7654 567789999999999998654
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2e-23 Score=220.72 Aligned_cols=201 Identities=15% Similarity=0.146 Sum_probs=172.1
Q ss_pred CCCCCEEEcccCcCccccCccc--ccc-ccceEecccccccccCC----ccccCCCCCCEEecccccCCccCCccccCCC
Q 040398 16 LPYLETVDFAYNYLHGSIPREW--ASM-QLKYISVFANRLSGNIP----SHLGNITSLTYLDLEENQFSGTIPRELGNLV 88 (732)
Q Consensus 16 l~~L~~L~Ls~N~l~~~~p~~~--~~~-~L~~L~L~~n~l~~~~p----~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 88 (732)
+++|++|+|++|.+++..|..+ ..+ +|++|+|++|++++..+ ..+..+++|++|+|++|++++..+..+..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4569999999999999999887 666 89999999999997665 4556799999999999999977788999999
Q ss_pred CCCEEeCCCCccccc--C--CccccCCCCCCEEEccCccccccCCc----cccCCCCCCEEEcccCCCcCcCCccccCc-
Q 040398 89 NLETLRLSSNRLIGN--L--PMELVKLKNLTDFRINDNNFNGSAPD----FIQSWTQLNRLEIQGSGLEGPIPPSISAL- 159 (732)
Q Consensus 89 ~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l- 159 (732)
+|++|+|++|++.+. + +..+..+++|++|+|++|+++ .++. .+..+++|+.|+|++|++++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 999999999998752 2 233478999999999999997 3333 35788999999999999998888888777
Q ss_pred --cCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcc
Q 040398 160 --DKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTG 222 (732)
Q Consensus 160 --~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 222 (732)
++|+.|+|++|+++.++...+ ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 249 ~~~~L~~L~Ls~N~l~~lp~~~~---~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLEQVPKGLP---AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCCSCCSCCC---SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCCchhhhhc---CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 699999999999997654432 7999999999999953 44 6789999999999999984
No 331
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=1.1e-22 Score=214.71 Aligned_cols=209 Identities=20% Similarity=0.306 Sum_probs=157.6
Q ss_pred EEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcc
Q 040398 22 VDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRL 100 (732)
Q Consensus 22 L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 100 (732)
+.+..+.+++.++ ...+ +|++|++++|+++ .+| .+..+++|++|+|++|.++ .++. +..+++|++|+|++|++
T Consensus 24 ~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 24 IAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPL 97 (308)
T ss_dssp HHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCC
T ss_pred HHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcC
Confidence 3444555553222 2334 6888888888887 455 5778888888888888887 4444 88888888888888888
Q ss_pred cccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccc
Q 040398 101 IGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPML 180 (732)
Q Consensus 101 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l 180 (732)
++ ++ .+..+++|+.|++++|++++. +. +..+++|+.|+|++|.+++..+ +..+++|+.|++++|.+.+... +
T Consensus 98 ~~-~~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l 169 (308)
T 1h6u_A 98 KN-VS-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--L 169 (308)
T ss_dssp SC-CG-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G
T ss_pred CC-ch-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--h
Confidence 74 33 678888888888888888753 33 7888888888888888875433 7788888888888888887655 7
Q ss_pred cCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcC
Q 040398 181 RNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTW 260 (732)
Q Consensus 181 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~ 260 (732)
..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|+|++|++++
T Consensus 170 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~----------------l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 170 ANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP----------------LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG----------------GTTCTTCCEEEEEEEEEEC
T ss_pred cCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc----------------ccCCCCCCEEEccCCeeec
Confidence 888889999999998885443 7788899999999998886543 4567888899999998876
Q ss_pred CC
Q 040398 261 QS 262 (732)
Q Consensus 261 ~~ 262 (732)
.+
T Consensus 232 ~~ 233 (308)
T 1h6u_A 232 QP 233 (308)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 332
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=5.9e-25 Score=237.70 Aligned_cols=253 Identities=14% Similarity=0.154 Sum_probs=194.3
Q ss_pred CCCCcccCCccCCCCCCCCEEEcccCcCccccC----cccccc--ccceEecccccccccCCccccCC-----CCCCEEe
Q 040398 2 LFSLPGTLPPQIVNLPYLETVDFAYNYLHGSIP----REWASM--QLKYISVFANRLSGNIPSHLGNI-----TSLTYLD 70 (732)
Q Consensus 2 l~~~~g~lP~~l~~l~~L~~L~Ls~N~l~~~~p----~~~~~~--~L~~L~L~~n~l~~~~p~~l~~l-----~~L~~L~ 70 (732)
..+++|.+|+.+...++|++|+|++|.+++..+ ..+..+ +|++|+|++|++++..+..+..+ ++|++|+
T Consensus 7 ~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~ 86 (362)
T 3goz_A 7 LHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLN 86 (362)
T ss_dssp CCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEE
T ss_pred cccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEE
Confidence 357888888888888889999999999997666 555544 59999999999997777777665 9999999
Q ss_pred cccccCCccCCccc----cCC-CCCCEEeCCCCcccccCCcccc----C-CCCCCEEEccCccccccCC----ccccCCC
Q 040398 71 LEENQFSGTIPREL----GNL-VNLETLRLSSNRLIGNLPMELV----K-LKNLTDFRINDNNFNGSAP----DFIQSWT 136 (732)
Q Consensus 71 Ls~N~l~~~~p~~l----~~l-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~L~~N~l~~~~p----~~~~~l~ 136 (732)
|++|.+++..+..+ ..+ ++|++|+|++|+|++..+..+. . .++|+.|+|++|.++...+ ..+..++
T Consensus 87 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 166 (362)
T 3goz_A 87 LSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIP 166 (362)
T ss_dssp CCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSC
T ss_pred CcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCC
Confidence 99999986666544 444 8999999999999866554443 3 3699999999999985443 4445665
Q ss_pred -CCCEEEcccCCCcCcCCcccc----Cc-cCCCeeeccCcCCCCCCccc----ccC-CCCccEEEcccccccCCcch---
Q 040398 137 -QLNRLEIQGSGLEGPIPPSIS----AL-DKLNQLRISDLQGPNQTFPM----LRN-MTGLTRIILRNCNIAGEIPE--- 202 (732)
Q Consensus 137 -~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~ls~N~l~~~~~~~----l~~-l~~L~~L~Ls~N~l~~~~p~--- 202 (732)
+|+.|+|++|++++..+..+. .+ ++|+.|+|++|.+....... +.. .++|++|+|++|.|++..+.
T Consensus 167 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 246 (362)
T 3goz_A 167 ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLK 246 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHH
T ss_pred ccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHH
Confidence 999999999999877665444 44 69999999999998854432 333 46899999999999976553
Q ss_pred -hhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCC
Q 040398 203 -YIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQ 261 (732)
Q Consensus 203 -~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~ 261 (732)
.+..+++|+.|+|++|.+.+..++. ...+...+.++++|+.|||++|++...
T Consensus 247 ~~~~~l~~L~~L~L~~n~l~~i~~~~-------~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 247 LLKDSLKHLQTVYLDYDIVKNMSKEQ-------CKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HTTTTTTTCSEEEEEHHHHTTCCHHH-------HHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHhcCCCccEEEeccCCccccCHHH-------HHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3456799999999999976443321 123334456778899999999998755
No 333
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.89 E-value=2e-22 Score=231.46 Aligned_cols=220 Identities=23% Similarity=0.271 Sum_probs=138.8
Q ss_pred cCCccCCCCCCCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCC
Q 040398 8 TLPPQIVNLPYLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNL 87 (732)
Q Consensus 8 ~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 87 (732)
.||..+. ++|++|+|++|+|+ .+|. ...+|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+
T Consensus 54 ~lp~~l~--~~L~~L~L~~N~l~-~lp~--~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~---~l 120 (622)
T 3g06_A 54 TLPDCLP--AHITTLVIPDNNLT-SLPA--LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA---LP 120 (622)
T ss_dssp CCCSCCC--TTCSEEEECSCCCS-CCCC--CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC---CC
T ss_pred ccChhhC--CCCcEEEecCCCCC-CCCC--cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC---CC
Confidence 4555554 68888999888888 5665 1227888888888888 5666 5688888888888887 4555 45
Q ss_pred CCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCcccc-----------------CCCCCCEEEcccCCCcC
Q 040398 88 VNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQ-----------------SWTQLNRLEIQGSGLEG 150 (732)
Q Consensus 88 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----------------~l~~L~~L~Ls~N~l~~ 150 (732)
++|+.|+|++|+|+ .+|.. +++|+.|+|++|++++ +|..+. .+++|+.|+|++|++++
T Consensus 121 ~~L~~L~L~~N~l~-~lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 121 SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp TTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC
T ss_pred CCcCEEECCCCCCC-cCCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC
Confidence 67777777777777 45543 3677777777777764 332221 12555555555555552
Q ss_pred cCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCcc
Q 040398 151 PIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVP 230 (732)
Q Consensus 151 ~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~ 230 (732)
+|.. +++|+.|++++|.++.++. .+++|+.|+|++|+|++ +| ..+++|+.|+|++|+|+. +|.
T Consensus 196 -l~~~---~~~L~~L~L~~N~l~~l~~----~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---- 258 (622)
T 3g06_A 196 -LPTL---PSELYKLWAYNNRLTSLPA----LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---- 258 (622)
T ss_dssp -CCCC---CTTCCEEECCSSCCSSCCC----CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC----
T ss_pred -CCCc---cchhhEEECcCCcccccCC----CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc----
Confidence 3322 2445555555555554332 23667777777777774 55 345777788888887773 343
Q ss_pred CcchhhHHHHHHhccCCCCeEEccCCcCcCCCCCCccccCCCCcc
Q 040398 231 ADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLN 275 (732)
Q Consensus 231 ~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~ 275 (732)
.+++|+.|+|++|+|+..|+....+..+..|+
T Consensus 259 -------------~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~ 290 (622)
T 3g06_A 259 -------------LPSGLLSLSVYRNQLTRLPESLIHLSSETTVN 290 (622)
T ss_dssp -------------CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEE
T ss_pred -------------ccccCcEEeCCCCCCCcCCHHHhhccccCEEE
Confidence 12567778888887775544444444444443
No 334
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=7.9e-23 Score=215.86 Aligned_cols=195 Identities=22% Similarity=0.337 Sum_probs=171.7
Q ss_pred CCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCC
Q 040398 13 IVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLE 91 (732)
Q Consensus 13 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 91 (732)
+.++++|++|++++|.++ .+| .+..+ +|++|+|++|+++ .++. +..+++|++|+|++|++++ ++ .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCC
Confidence 456889999999999998 456 46666 8999999999999 4555 9999999999999999984 44 799999999
Q ss_pred EEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcC
Q 040398 92 TLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 92 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 171 (732)
+|+|++|++++ ++ .+..+++|+.|++++|++++..+ +..+++|+.|+|++|++++. +. +..+++|+.|++++|.
T Consensus 111 ~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCC-CG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCC-ch-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCc
Confidence 99999999995 44 38999999999999999986544 89999999999999999954 33 8999999999999999
Q ss_pred CCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc
Q 040398 172 GPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
+.+... +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++.
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 998765 8899999999999999996553 88999999999999999864
No 335
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=3.6e-24 Score=228.76 Aligned_cols=202 Identities=17% Similarity=0.213 Sum_probs=124.0
Q ss_pred CCCCEEEcccCcCccccCccccccccceEeccccccccc-CCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeC
Q 040398 17 PYLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGN-IPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRL 95 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 95 (732)
++++.|++++|.+.+..+..+...+|++|+|++|.+++. +|..+..+++|++|+|++|.+++..+..+..+++|++|+|
T Consensus 70 ~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred ccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 566666666666665555544333666666666666644 5666666666666666666666566666666666666666
Q ss_pred CCC-cccc-cCCccccCCCCCCEEEccCc-ccccc-CCccccCCC-CCCEEEcccC--CCc-CcCCccccCccCCCeeec
Q 040398 96 SSN-RLIG-NLPMELVKLKNLTDFRINDN-NFNGS-APDFIQSWT-QLNRLEIQGS--GLE-GPIPPSISALDKLNQLRI 167 (732)
Q Consensus 96 ~~N-~l~~-~~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~l 167 (732)
++| .+++ .++..+.++++|+.|++++| .+++. ++..+..++ +|+.|+|++| .++ +.++..+..+++|+.|++
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l 229 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 229 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEEC
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeC
Confidence 666 4554 24555666666666666666 66543 455566666 6666666666 343 344555566666666666
Q ss_pred cCcC-CCCCCcccccCCCCccEEEccccc-ccCCcchhhcCCCCCcEEeCCCC
Q 040398 168 SDLQ-GPNQTFPMLRNMTGLTRIILRNCN-IAGEIPEYIWGIKNLRFLDLSFN 218 (732)
Q Consensus 168 s~N~-l~~~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N 218 (732)
++|. +++..+..+..+++|++|+|++|. +.......+.++++|+.|+|++|
T Consensus 230 ~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 230 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 6666 555555566666666666666664 22222224556666666666666
No 336
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.88 E-value=1.8e-22 Score=224.61 Aligned_cols=224 Identities=20% Similarity=0.204 Sum_probs=165.3
Q ss_pred CCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCC-------------CEEecccccCCcc
Q 040398 14 VNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSL-------------TYLDLEENQFSGT 79 (732)
Q Consensus 14 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L-------------~~L~Ls~N~l~~~ 79 (732)
.+.++|++|++++|++ +.+|..++.+ +|++|++++|++.|.+|..++++++| ++|++++|.++ .
T Consensus 8 ~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~ 85 (454)
T 1jl5_A 8 VSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-S 85 (454)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-C
T ss_pred cccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-c
Confidence 3568999999999999 6999999999 79999999999999999999999875 99999999999 5
Q ss_pred CCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCc
Q 040398 80 IPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISAL 159 (732)
Q Consensus 80 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 159 (732)
+|.. .++|++|++++|++++ +|.. +++|+.|++++|++++ +|.. .++|++|++++|++++ +| .+..+
T Consensus 86 lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l 152 (454)
T 1jl5_A 86 LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNS 152 (454)
T ss_dssp CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTC
T ss_pred CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCC
Confidence 6652 3789999999999996 7754 4899999999999985 3322 2799999999999996 77 69999
Q ss_pred cCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHH
Q 040398 160 DKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQIL 239 (732)
Q Consensus 160 ~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~ 239 (732)
++|++|++++|++++++. ...+|++|+|++|++++ +| .+..+++|+.|++++|++++ +|..
T Consensus 153 ~~L~~L~l~~N~l~~lp~----~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~------------ 213 (454)
T 1jl5_A 153 SFLKIIDVDNNSLKKLPD----LPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL------------ 213 (454)
T ss_dssp TTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC------------
T ss_pred CCCCEEECCCCcCcccCC----CcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC------------
Confidence 999999999999997543 23599999999999996 67 58999999999999999996 4432
Q ss_pred HHHhccCCCCeEEccCCcCcCCCCCCccccCCCCcccc
Q 040398 240 MFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLNLN 277 (732)
Q Consensus 240 ~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~~~ 277 (732)
..+|+.|++++|+++ .+|....+..+..|++.
T Consensus 214 -----~~~L~~L~l~~n~l~-~lp~~~~l~~L~~L~l~ 245 (454)
T 1jl5_A 214 -----PLSLESIVAGNNILE-ELPELQNLPFLTTIYAD 245 (454)
T ss_dssp -----CTTCCEEECCSSCCS-SCCCCTTCTTCCEEECC
T ss_pred -----cCcccEEECcCCcCC-cccccCCCCCCCEEECC
Confidence 147899999999999 45555555555555543
No 337
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.6e-22 Score=210.48 Aligned_cols=165 Identities=18% Similarity=0.068 Sum_probs=129.2
Q ss_pred HHHHHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccc------------------cchHHHHHHHHHHhcC
Q 040398 506 LKQIRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSR------------------QGNREFLNEIGTISCL 567 (732)
Q Consensus 506 ~~~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~------------------~~~~~~~~E~~~l~~l 567 (732)
+..+......|.+.+.||+|+||.||+|++.+|+.||+|+++.... .....+.+|+++++++
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 3444555667778899999999999999997899999999864321 1245688999999999
Q ss_pred CCCceeeeeeeEEeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCCC
Q 040398 568 QHPNLVKLYGCCIEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKATN 647 (732)
Q Consensus 568 ~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~N 647 (732)
+ | +++.+++.. +..++||||+++++|.+ +.. .....++.||++||+|||+.+ |+||||||+|
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~N 223 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYN 223 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTS
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHH
Confidence 9 5 667765544 55699999999999998 411 124479999999999999986 9999999999
Q ss_pred eEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhccc----------CCCCCchhHHH
Q 040398 648 VLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALW----------GYLTYKADVYS 703 (732)
Q Consensus 648 ILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~----------~~~~~k~DvwS 703 (732)
||++ ++.+||+|||+|+.. ..|+|||++.. ..+...+|+|.
T Consensus 224 ILl~-~~~vkl~DFG~a~~~--------------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQSVEV--------------GEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp EEEE-TTEEEECCCTTCEET--------------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred EEEE-CCcEEEEECCCCeEC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 9999 999999999998632 25788998753 34555667664
No 338
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=7.5e-22 Score=224.01 Aligned_cols=183 Identities=22% Similarity=0.289 Sum_probs=153.6
Q ss_pred CCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCC
Q 040398 18 YLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSS 97 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 97 (732)
+|+.|+|++|++++ +|..+. .+|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~-~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP-PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC-TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred CccEEEeCCCCCCc-cCHhHc-CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 89999999999985 776553 47999999999999 788 457999999999999995 787 665 899999999
Q ss_pred CcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCc
Q 040398 98 NRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTF 177 (732)
Q Consensus 98 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~ 177 (732)
|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. +. ++|+.|+|++|.++.++.
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~ 197 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA 197 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh
Confidence 99995 776 68999999999999986 665 57899999999999986 776 65 899999999999997665
Q ss_pred ccccCCCCc-------cEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCC
Q 040398 178 PMLRNMTGL-------TRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDV 227 (732)
Q Consensus 178 ~~l~~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~ 227 (732)
+.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|..
T Consensus 198 --~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 198 --VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp --CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHH
T ss_pred --HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHH
Confidence 443 66 99999999999 68888888999999999999999877753
No 339
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.86 E-value=8.8e-21 Score=217.84 Aligned_cols=214 Identities=22% Similarity=0.218 Sum_probs=158.9
Q ss_pred CCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCC
Q 040398 18 YLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSS 97 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 97 (732)
+++.|++++|.++ .+|..+. .+|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|+|++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~-~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP-AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC-TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred CCcEEEecCCCcC-ccChhhC-CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcC
Confidence 5899999999999 7787665 58999999999999 6777 5799999999999998 6776 679999999999
Q ss_pred CcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccc---cCc--------------c
Q 040398 98 NRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSI---SAL--------------D 160 (732)
Q Consensus 98 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l--------------~ 160 (732)
|+|+ .+|. .+++|+.|++++|+|++ +|.. +++|+.|+|++|++++ +|..+ ..+ +
T Consensus 111 N~l~-~l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~ 181 (622)
T 3g06_A 111 NPLT-HLPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPS 181 (622)
T ss_dssp CCCC-CCCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCT
T ss_pred CcCC-CCCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCC
Confidence 9999 5665 57899999999999985 5553 4899999999999985 34322 222 4
Q ss_pred CCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHH
Q 040398 161 KLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILM 240 (732)
Q Consensus 161 ~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~ 240 (732)
+|+.|++++|.++.++. .+++|+.|++++|.|+ .+|. .+++|+.|+|++|+|++ +|.
T Consensus 182 ~L~~L~Ls~N~l~~l~~----~~~~L~~L~L~~N~l~-~l~~---~~~~L~~L~Ls~N~L~~-lp~-------------- 238 (622)
T 3g06_A 182 GLQELSVSDNQLASLPT----LPSELYKLWAYNNRLT-SLPA---LPSGLKELIVSGNRLTS-LPV-------------- 238 (622)
T ss_dssp TCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCS-SCCC---CCTTCCEEECCSSCCSC-CCC--------------
T ss_pred CCcEEECCCCCCCCCCC----ccchhhEEECcCCccc-ccCC---CCCCCCEEEccCCccCc-CCC--------------
Confidence 55555555555554332 1345666666666665 3443 23678888888888885 342
Q ss_pred HHhccCCCCeEEccCCcCcCCCCCCccccCCCCcccccc
Q 040398 241 FIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLNLNLF 279 (732)
Q Consensus 241 ~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~~~~~ 279 (732)
.+++|+.|+|++|+|+..++ .+..+..|++...
T Consensus 239 ---~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N 271 (622)
T 3g06_A 239 ---LPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRN 271 (622)
T ss_dssp ---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSS
T ss_pred ---CCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCC
Confidence 23689999999999996654 3455555655433
No 340
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.86 E-value=4.2e-23 Score=223.17 Aligned_cols=233 Identities=17% Similarity=0.177 Sum_probs=187.9
Q ss_pred EEEcccCcCccccCcccccc-ccceEecccccccccCC----ccccCCC-CCCEEecccccCCccCCccccCC-----CC
Q 040398 21 TVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIP----SHLGNIT-SLTYLDLEENQFSGTIPRELGNL-----VN 89 (732)
Q Consensus 21 ~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l-----~~ 89 (732)
.++|+.|.+++.+|..+... +|++|+|++|++++..+ ..+.+++ +|++|+|++|.|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 47899999999998888777 59999999999996655 7788898 99999999999997777777664 99
Q ss_pred CCEEeCCCCcccccCCccc----cCC-CCCCEEEccCccccccCCcccc----C-CCCCCEEEcccCCCcCcCC----cc
Q 040398 90 LETLRLSSNRLIGNLPMEL----VKL-KNLTDFRINDNNFNGSAPDFIQ----S-WTQLNRLEIQGSGLEGPIP----PS 155 (732)
Q Consensus 90 L~~L~L~~N~l~~~~p~~l----~~l-~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~Ls~N~l~~~~p----~~ 155 (732)
|++|+|++|+|++..+..+ ..+ ++|+.|+|++|+|++..+..+. . .++|+.|+|++|.+++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999997666644 444 8999999999999877665543 3 3699999999999986443 34
Q ss_pred ccCcc-CCCeeeccCcCCCCCCccccc----CC-CCccEEEcccccccCC----cchhhcC-CCCCcEEeCCCCcCcccC
Q 040398 156 ISALD-KLNQLRISDLQGPNQTFPMLR----NM-TGLTRIILRNCNIAGE----IPEYIWG-IKNLRFLDLSFNQLTGEL 224 (732)
Q Consensus 156 ~~~l~-~L~~L~ls~N~l~~~~~~~l~----~l-~~L~~L~Ls~N~l~~~----~p~~l~~-l~~L~~L~Ls~N~l~g~~ 224 (732)
+..++ +|+.|+|++|.++......+. .+ ++|++|+|++|.|++. ++..+.. .++|+.|+|++|++++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 999999999999988765444 44 5999999999999964 5556666 459999999999998654
Q ss_pred CCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCC
Q 040398 225 PDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSP 263 (732)
Q Consensus 225 p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p 263 (732)
+. .+...+..+++|+.|+|++|+++...+
T Consensus 242 ~~----------~l~~~~~~l~~L~~L~L~~n~l~~i~~ 270 (362)
T 3goz_A 242 LE----------NLKLLKDSLKHLQTVYLDYDIVKNMSK 270 (362)
T ss_dssp HH----------HHHHTTTTTTTCSEEEEEHHHHTTCCH
T ss_pred HH----------HHHHHHhcCCCccEEEeccCCccccCH
Confidence 32 233446778899999999999765543
No 341
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=3.9e-21 Score=190.67 Aligned_cols=174 Identities=21% Similarity=0.280 Sum_probs=95.1
Q ss_pred ceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCc
Q 040398 43 KYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDN 122 (732)
Q Consensus 43 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 122 (732)
+.++++++.++ .+|..+ .++|++|+|++|++++..+..+..+++|++|+|++|+|++..+..+..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 44555555555 445433 245666666666665433344555666666666666665443444555666666666666
Q ss_pred cccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcch
Q 040398 123 NFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPE 202 (732)
Q Consensus 123 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 202 (732)
++++..+..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|.++.++...+..+++|++|+|++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 6654444455556666666666666554444445555555555555555555444445555555555555555542
Q ss_pred hhcCCCCCcEEeCCCCcCcccCCC
Q 040398 203 YIWGIKNLRFLDLSFNQLTGELPD 226 (732)
Q Consensus 203 ~l~~l~~L~~L~Ls~N~l~g~~p~ 226 (732)
.+++|+.|+++.|+++|.+|+
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~ 183 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRN 183 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBC
T ss_pred ---CCCCHHHHHHHHHhCCceeec
Confidence 234455555555555555554
No 342
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=5.4e-21 Score=189.64 Aligned_cols=182 Identities=20% Similarity=0.186 Sum_probs=157.3
Q ss_pred CCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCC
Q 040398 19 LETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSN 98 (732)
Q Consensus 19 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 98 (732)
-+.++++++.++ .+|..+. .+|++|+|++|++++..+..+.++++|++|+|++|+|++..+..+..+++|++|+|++|
T Consensus 9 ~~~v~c~~~~l~-~~p~~~~-~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGIP-AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TTEEECCSSCCS-SCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCcc-CCCCCCC-CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 367889999888 5665442 27999999999999666667899999999999999999555556789999999999999
Q ss_pred cccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcc
Q 040398 99 RLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFP 178 (732)
Q Consensus 99 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 178 (732)
+|++..+..+..+++|+.|+|++|+|++..+..+..+++|+.|+|++|++++..+..+..+++|+.|++++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~----- 161 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD----- 161 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC-----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee-----
Confidence 999666666899999999999999999877788999999999999999999777777899999999999999765
Q ss_pred cccCCCCccEEEcccccccCCcchhhcCCCC
Q 040398 179 MLRNMTGLTRIILRNCNIAGEIPEYIWGIKN 209 (732)
Q Consensus 179 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 209 (732)
..+++|++|+++.|+++|.+|+.++.++.
T Consensus 162 --~~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 162 --CTCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp --CCTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred --cCCCCHHHHHHHHHhCCceeeccCccccC
Confidence 34678999999999999999998887765
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.85 E-value=9.1e-21 Score=203.83 Aligned_cols=200 Identities=17% Similarity=0.137 Sum_probs=129.2
Q ss_pred CEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCc-cccCCCCCCE-EeCCC
Q 040398 20 ETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPR-ELGNLVNLET-LRLSS 97 (732)
Q Consensus 20 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~-L~L~~ 97 (732)
++++.++++++ .+|..+. .++++|+|++|+|+..-+..|.++++|++|+|++|++.+.+|. .|.++++|++ +.+++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~-~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP-RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC-TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC-CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 56777777777 5665442 2577777777777733334677777777777777777655553 5666766654 45556
Q ss_pred CcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEccc-CCCcCcCCccccCcc-CCCeeeccCcCCCCC
Q 040398 98 NRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQG-SGLEGPIPPSISALD-KLNQLRISDLQGPNQ 175 (732)
Q Consensus 98 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~-~L~~L~ls~N~l~~~ 175 (732)
|+|+...|..|..+++|+.|++++|+++...+..+....++..|++.+ |++....+..|..+. .++.|++++|+++.+
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i 169 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI 169 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE
T ss_pred CcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCC
Confidence 777765566677777777777777777765555566666677777754 455544444555554 566777777777766
Q ss_pred CcccccCCCCccEEEccc-ccccCCcc-hhhcCCCCCcEEeCCCCcCccc
Q 040398 176 TFPMLRNMTGLTRIILRN-CNIAGEIP-EYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 176 ~~~~l~~l~~L~~L~Ls~-N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
+...|. ..+|++|++++ |.++ .+| +.|..+++|+.|||++|+|+..
T Consensus 170 ~~~~f~-~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~l 217 (350)
T 4ay9_X 170 HNSAFN-GTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSL 217 (350)
T ss_dssp CTTSST-TEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCC
T ss_pred Chhhcc-ccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCcc
Confidence 655553 34677777764 4455 444 4566777777777777777743
No 344
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.85 E-value=6.4e-24 Score=237.07 Aligned_cols=243 Identities=17% Similarity=0.185 Sum_probs=152.0
Q ss_pred cCCccCCCCCCCCEEEcccCcCccccCccccc-----c-ccceEeccccccccc----CCccccCCCCCCEEecccccCC
Q 040398 8 TLPPQIVNLPYLETVDFAYNYLHGSIPREWAS-----M-QLKYISVFANRLSGN----IPSHLGNITSLTYLDLEENQFS 77 (732)
Q Consensus 8 ~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-----~-~L~~L~L~~n~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 77 (732)
.+|..+.++++|++|+|++|.+++..+..+.. . +|++|+|++|++++. ++..+..+++|++|+|++|.++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 45666777777777777777776544443332 1 477777777777653 3455566677777777777776
Q ss_pred ccCCcccc-----CCCCCCEEeCCCCccccc----CCccccCCCCCCEEEccCccccccC-----CccccCCCCCCEEEc
Q 040398 78 GTIPRELG-----NLVNLETLRLSSNRLIGN----LPMELVKLKNLTDFRINDNNFNGSA-----PDFIQSWTQLNRLEI 143 (732)
Q Consensus 78 ~~~p~~l~-----~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L 143 (732)
+..+..+. .+++|++|+|++|.+++. ++..+..+++|+.|++++|.++... +..+..+++|+.|+|
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L 263 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWI 263 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEEC
Confidence 44333332 255777777777777642 4566667777777777777775432 222335677777777
Q ss_pred ccCCCcCc----CCccccCccCCCeeeccCcCCCCCCcccccC-----CCCccEEEcccccccCC----cchhhcCCCCC
Q 040398 144 QGSGLEGP----IPPSISALDKLNQLRISDLQGPNQTFPMLRN-----MTGLTRIILRNCNIAGE----IPEYIWGIKNL 210 (732)
Q Consensus 144 s~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~-----l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L 210 (732)
++|.++.. ++..+..+++|+.|++++|.+.+.....+.. .++|++|+|++|.+++. ++..+..+++|
T Consensus 264 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 264 WECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred cCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 77777643 4566666777777777777766544333332 25777777777777755 45566667777
Q ss_pred cEEeCCCCcCcccCCCCCccCcchhhHHHHHHhc-cCCCCeEEccCCcCcC
Q 040398 211 RFLDLSFNQLTGELPDVAVPADLKFTQILMFIRG-VYEHQSLDLSYNNFTW 260 (732)
Q Consensus 211 ~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~-l~~L~~LdLs~N~l~~ 260 (732)
+.|+|++|++++..+. .+...+.. .++|+.|+|++|+++.
T Consensus 344 ~~L~Ls~n~i~~~~~~----------~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 344 LELQISNNRLEDAGVR----------ELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp CEEECCSSBCHHHHHH----------HHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred cEEEccCCccccccHH----------HHHHHHcCCCCceEEEECCCCCCCh
Confidence 7888877777643221 11112221 4567777777777663
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=5.9e-23 Score=224.02 Aligned_cols=217 Identities=19% Similarity=0.248 Sum_probs=180.8
Q ss_pred CCccCCCCCCCCEEEcccC---cCccccCccc-------ccc-ccceEecccccccc----cCCccccCCCCCCEEeccc
Q 040398 9 LPPQIVNLPYLETVDFAYN---YLHGSIPREW-------ASM-QLKYISVFANRLSG----NIPSHLGNITSLTYLDLEE 73 (732)
Q Consensus 9 lP~~l~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~~-~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~ 73 (732)
++..+.++++|++|+|++| ++++.+|..+ ..+ +|++|+|++|++++ .+|..+.++++|++|+|++
T Consensus 52 l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~ 131 (386)
T 2ca6_A 52 LSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHN 131 (386)
T ss_dssp HHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCS
T ss_pred HHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcC
Confidence 4456889999999999996 5556667655 444 79999999999997 4788899999999999999
Q ss_pred ccCCccCCcc----ccCC---------CCCCEEeCCCCccc-ccCC---ccccCCCCCCEEEccCcccc--c---cCCcc
Q 040398 74 NQFSGTIPRE----LGNL---------VNLETLRLSSNRLI-GNLP---MELVKLKNLTDFRINDNNFN--G---SAPDF 131 (732)
Q Consensus 74 N~l~~~~p~~----l~~l---------~~L~~L~L~~N~l~-~~~p---~~l~~l~~L~~L~L~~N~l~--~---~~p~~ 131 (732)
|.|++..+.. +..+ ++|++|+|++|+|+ +.+| ..+..+++|+.|+|++|+++ | ..+..
T Consensus 132 n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~ 211 (386)
T 2ca6_A 132 NGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEG 211 (386)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHH
Confidence 9997543333 4344 89999999999998 4455 46778999999999999997 3 34558
Q ss_pred ccCCCCCCEEEcccCCCc----CcCCccccCccCCCeeeccCcCCCCCC----cccc--cCCCCccEEEcccccccC---
Q 040398 132 IQSWTQLNRLEIQGSGLE----GPIPPSISALDKLNQLRISDLQGPNQT----FPML--RNMTGLTRIILRNCNIAG--- 198 (732)
Q Consensus 132 ~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~ls~N~l~~~~----~~~l--~~l~~L~~L~Ls~N~l~~--- 198 (732)
+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.++... +..+ ..+++|+.|+|++|.|++
T Consensus 212 l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~ 291 (386)
T 2ca6_A 212 LAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAV 291 (386)
T ss_dssp GGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHH
T ss_pred hhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHH
Confidence 899999999999999996 578889999999999999999998763 3344 338999999999999997
Q ss_pred -Ccchhh-cCCCCCcEEeCCCCcCcccCC
Q 040398 199 -EIPEYI-WGIKNLRFLDLSFNQLTGELP 225 (732)
Q Consensus 199 -~~p~~l-~~l~~L~~L~Ls~N~l~g~~p 225 (732)
.+|..+ .++++|+.|+|++|++++..|
T Consensus 292 ~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 292 RTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 488887 668999999999999997654
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=9.5e-21 Score=214.97 Aligned_cols=182 Identities=21% Similarity=0.270 Sum_probs=156.7
Q ss_pred ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcc
Q 040398 41 QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIN 120 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 120 (732)
+|++|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 69999999999995 888774 89999999999999 788 557999999999999996 787 655 99999999
Q ss_pred CccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCc
Q 040398 121 DNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEI 200 (732)
Q Consensus 121 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 200 (732)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|.++.++. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~--l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE--LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC--CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch--hh--CCCCEEECcCCCCC-ch
Confidence 999997 666 68999999999999996 666 67899999999999999666 55 89999999999999 77
Q ss_pred chhhcCCCCC-------cEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCC
Q 040398 201 PEYIWGIKNL-------RFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 201 p~~l~~l~~L-------~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~ 264 (732)
|. +.. +| +.|+|++|+|+ .+|.. +..+++|+.|+|++|+|++.+|.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~--------------l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPEN--------------ILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGG--------------GGGSCTTEEEECCSSSCCHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHH--------------HhcCCCCCEEEeeCCcCCCcCHH
Confidence 77 554 77 99999999999 45653 55688999999999999988764
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=4.7e-22 Score=212.30 Aligned_cols=222 Identities=15% Similarity=0.200 Sum_probs=187.3
Q ss_pred CCCEEEcccCcCccccCcccccc---ccceEecccccccccCCccccCCCCCCEEecccccCCcc-CCccccCCCCCCEE
Q 040398 18 YLETVDFAYNYLHGSIPREWASM---QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGT-IPRELGNLVNLETL 93 (732)
Q Consensus 18 ~L~~L~Ls~N~l~~~~p~~~~~~---~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L 93 (732)
.++.|++++|.+. |..+..+ +++.|++++|.+.+..+. +..+++|++|+|++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4889999999887 3444444 699999999999966555 67899999999999999865 88889999999999
Q ss_pred eCCCCcccccCCccccCCCCCCEEEccCc-ccccc-CCccccCCCCCCEEEcccC-CCcCc-CCccccCcc-CCCeeecc
Q 040398 94 RLSSNRLIGNLPMELVKLKNLTDFRINDN-NFNGS-APDFIQSWTQLNRLEIQGS-GLEGP-IPPSISALD-KLNQLRIS 168 (732)
Q Consensus 94 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~L~~L~ls 168 (732)
+|++|++++..+..+..+++|+.|+|++| .+++. ++..+..+++|+.|+|++| .+++. ++..+..++ +|+.|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999999888889999999999999999 67753 6777899999999999999 99864 577789999 99999999
Q ss_pred Cc--CCCC-CCcccccCCCCccEEEccccc-ccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhc
Q 040398 169 DL--QGPN-QTFPMLRNMTGLTRIILRNCN-IAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRG 244 (732)
Q Consensus 169 ~N--~l~~-~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~ 244 (732)
+| .++. ..+..+..+++|++|+|++|. +++..+..+..+++|+.|+|++|. +..+... ..+.+
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~-----------~~l~~ 270 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETL-----------LELGE 270 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGG-----------GGGGG
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHH-----------HHHhc
Confidence 99 4542 234457789999999999999 787888899999999999999996 2222211 12567
Q ss_pred cCCCCeEEccCC
Q 040398 245 VYEHQSLDLSYN 256 (732)
Q Consensus 245 l~~L~~LdLs~N 256 (732)
+++|+.|+|++|
T Consensus 271 ~~~L~~L~l~~~ 282 (336)
T 2ast_B 271 IPTLKTLQVFGI 282 (336)
T ss_dssp CTTCCEEECTTS
T ss_pred CCCCCEEeccCc
Confidence 899999999999
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=4.3e-20 Score=198.50 Aligned_cols=221 Identities=18% Similarity=0.188 Sum_probs=157.7
Q ss_pred CCCCEEEcccCcCccccCcccccc-ccceEecccccccccCC-ccccCCCCCCE-EecccccCCccCCccccCCCCCCEE
Q 040398 17 PYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIP-SHLGNITSLTY-LDLEENQFSGTIPRELGNLVNLETL 93 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p-~~l~~l~~L~~-L~Ls~N~l~~~~p~~l~~l~~L~~L 93 (732)
++|++|+|++|+|+...+..|..+ +|++|+|++|++.+.+| ..|.++++|++ +.++.|+|+...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 568888888888885555577777 78888888888766665 45777877765 5666788886666778888888888
Q ss_pred eCCCCcccccCCccccCCCCCCEEEccC-ccccccCCccccCCC-CCCEEEcccCCCcCcCCccccCccCCCeeeccC-c
Q 040398 94 RLSSNRLIGNLPMELVKLKNLTDFRIND-NNFNGSAPDFIQSWT-QLNRLEIQGSGLEGPIPPSISALDKLNQLRISD-L 170 (732)
Q Consensus 94 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~-N 170 (732)
++++|+|++..+..+....++..|++.+ |++....+..|..+. .|+.|+|++|+|+ .+|.......+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCC
Confidence 8888888865555666667777888865 566655556666654 5778888888888 4555555567788888864 6
Q ss_pred CCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCe
Q 040398 171 QGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQS 250 (732)
Q Consensus 171 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~ 250 (732)
.+..++...|..+++|++|+|++|+|+ .+|.. .+.+|+.|.+.++.--..+|. +.++++|+.
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~--~~~~L~~L~~l~~~~l~~lP~---------------l~~l~~L~~ 250 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIH-SLPSY--GLENLKKLRARSTYNLKKLPT---------------LEKLVALME 250 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCC-CCCSS--SCTTCCEEECTTCTTCCCCCC---------------TTTCCSCCE
T ss_pred cccCCCHHHhccCcccchhhcCCCCcC-ccChh--hhccchHhhhccCCCcCcCCC---------------chhCcChhh
Confidence 777777778888888888888888888 44442 245566666555443335553 345677888
Q ss_pred EEccCC
Q 040398 251 LDLSYN 256 (732)
Q Consensus 251 LdLs~N 256 (732)
++++++
T Consensus 251 l~l~~~ 256 (350)
T 4ay9_X 251 ASLTYP 256 (350)
T ss_dssp EECSCH
T ss_pred CcCCCC
Confidence 888765
No 349
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.83 E-value=7.3e-23 Score=228.48 Aligned_cols=184 Identities=14% Similarity=0.161 Sum_probs=77.2
Q ss_pred CCCCCCCEEEcccCcCccc----cCcccccc-ccceEecccccccccCCccc-cCCC----CCCEEecccccCCc----c
Q 040398 14 VNLPYLETVDFAYNYLHGS----IPREWASM-QLKYISVFANRLSGNIPSHL-GNIT----SLTYLDLEENQFSG----T 79 (732)
Q Consensus 14 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~~-~L~~L~L~~n~l~~~~p~~l-~~l~----~L~~L~Ls~N~l~~----~ 79 (732)
..+++|++|+|++|.++.. ++..+... +|++|+|++|++....+..+ ..++ +|++|+|++|+++. .
T Consensus 25 ~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~ 104 (461)
T 1z7x_W 25 PLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGV 104 (461)
T ss_dssp HHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHH
T ss_pred hhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHH
Confidence 3444555555555554421 22333333 45555555555443222221 1122 35555555555442 2
Q ss_pred CCccccCCCCCCEEeCCCCcccccCCcccc-----CCCCCCEEEccCccccccC----CccccCCCCCCEEEcccCCCcC
Q 040398 80 IPRELGNLVNLETLRLSSNRLIGNLPMELV-----KLKNLTDFRINDNNFNGSA----PDFIQSWTQLNRLEIQGSGLEG 150 (732)
Q Consensus 80 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~ 150 (732)
++..+..+++|++|+|++|.+++..+..+. .+++|+.|++++|++++.. +..+..+++|+.|+|++|.++.
T Consensus 105 l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 184 (461)
T 1z7x_W 105 LSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINE 184 (461)
T ss_dssp HHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcch
Confidence 344444555555555555554432222211 1234555555555444321 3333444455555555554443
Q ss_pred cCCcccc-----CccCCCeeeccCcCCCCCC----cccccCCCCccEEEccccccc
Q 040398 151 PIPPSIS-----ALDKLNQLRISDLQGPNQT----FPMLRNMTGLTRIILRNCNIA 197 (732)
Q Consensus 151 ~~p~~~~-----~l~~L~~L~ls~N~l~~~~----~~~l~~l~~L~~L~Ls~N~l~ 197 (732)
..+..+. ..++|+.|++++|.++... +..+..+++|++|+|++|.++
T Consensus 185 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 185 AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 2222221 1334444455444444432 222333444444444444444
No 350
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=2.4e-20 Score=195.04 Aligned_cols=191 Identities=18% Similarity=0.270 Sum_probs=134.1
Q ss_pred cceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccC
Q 040398 42 LKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIND 121 (732)
Q Consensus 42 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 121 (732)
+..+.+..+.+.+..+ +..+++|++|++++|.+. .++ .+..+++|++|+|++|++++. +. +..+++|+.|++++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCC
Confidence 4445555665553322 345677777777777776 444 366777777777777777743 33 77777777777777
Q ss_pred ccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcc
Q 040398 122 NNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIP 201 (732)
Q Consensus 122 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 201 (732)
|.+++ ++ .+..+++|+.|+|++|++++. ..+..+++|+.|++++|.++.. ..+..+++|+.|+|++|++++..|
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 77764 22 377777777777777777743 4577777788888888877776 567778888888888888886544
Q ss_pred hhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCC
Q 040398 202 EYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQS 262 (732)
Q Consensus 202 ~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~ 262 (732)
+..+++|+.|+|++|++++. |. +..+++|+.|+|++|+++..+
T Consensus 174 --l~~l~~L~~L~L~~N~i~~l-~~---------------l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISDL-RA---------------LAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCBC-GG---------------GTTCTTCSEEEEEEEEEECCC
T ss_pred --hcCCCccCEEECCCCcCCCC-hh---------------hccCCCCCEEECcCCcccCCc
Confidence 77888888888888888753 21 456778888888888887543
No 351
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=5.2e-20 Score=198.77 Aligned_cols=179 Identities=19% Similarity=0.152 Sum_probs=135.9
Q ss_pred ccceEecccccccccCCccccCCCCCCEEecccccCCccCCcccc-CCCCCCEEeCCCCcccccCCccccCCCCCCEEEc
Q 040398 41 QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELG-NLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRI 119 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 119 (732)
.-+.+++++|+|+ .+|..+. ..|+.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|.++++|+.|+|
T Consensus 19 ~~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 19 ASNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp ETTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 3467778888877 6776554 4577888888888755555666 7888888888888888666667788888888888
Q ss_pred cCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccc---cCCCCccEEEcccccc
Q 040398 120 NDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPML---RNMTGLTRIILRNCNI 196 (732)
Q Consensus 120 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l---~~l~~L~~L~Ls~N~l 196 (732)
++|+|++..+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|.+..++...| ..+++|+.|+|++|+|
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 8888877777778888888888888888887777778888888888888888887776666 5678888888888888
Q ss_pred cCCcchhhcCCCC--CcEEeCCCCcCcc
Q 040398 197 AGEIPEYIWGIKN--LRFLDLSFNQLTG 222 (732)
Q Consensus 197 ~~~~p~~l~~l~~--L~~L~Ls~N~l~g 222 (732)
++..+..+..+++ |+.|+|++|++..
T Consensus 176 ~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 176 KKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CccCHHHhhhccHhhcceEEecCCCccC
Confidence 8666667777776 4778888888874
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=5.5e-20 Score=210.92 Aligned_cols=189 Identities=21% Similarity=0.278 Sum_probs=109.4
Q ss_pred CCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCC
Q 040398 19 LETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSS 97 (732)
Q Consensus 19 L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 97 (732)
+..+.|..+.+...++ +..+ +|++|+|++|.+. .++ .+..+++|+.|+|++|+|++. +. +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~-~~-l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDI-KP-LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCC-GG-GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCC-hh-hccCCCCCEEECcC
Confidence 3334455555553322 2233 5666666666666 333 366666666666666666633 32 66666666666666
Q ss_pred CcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCc
Q 040398 98 NRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTF 177 (732)
Q Consensus 98 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~ 177 (732)
|+|++ +| .+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+.+..+
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 66653 33 566666666666666666532 3456666666666666666643 455666666666666666655544
Q ss_pred ccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc
Q 040398 178 PMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 178 ~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
+..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|++++.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEECCSEEEECC
T ss_pred --hccCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEccCCcCcCC
Confidence 5566666666666666653 22 355666666666666666543
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.9e-19 Score=188.28 Aligned_cols=188 Identities=22% Similarity=0.295 Sum_probs=155.2
Q ss_pred CEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCC
Q 040398 20 ETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSN 98 (732)
Q Consensus 20 ~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 98 (732)
..+.+..+.+++..+ +..+ +|++|++++|.+. .++ .+..+++|++|+|++|++++ ++. +..+++|++|+|++|
T Consensus 27 ~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 27 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSS
T ss_pred HHHHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCC
Confidence 334555666653322 2344 7999999999998 454 48889999999999999984 444 889999999999999
Q ss_pred cccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcc
Q 040398 99 RLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFP 178 (732)
Q Consensus 99 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~ 178 (732)
++++ +| .+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+.+..+
T Consensus 101 ~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 101 KVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp CCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred cCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 9984 44 488999999999999999853 4688899999999999999864 678899999999999999988765
Q ss_pred cccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCccc
Q 040398 179 MLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 179 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
+..+++|+.|+|++|.|++ ++. +..+++|+.|++++|+++..
T Consensus 174 -l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEEEECC
T ss_pred -hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCcccCC
Confidence 8899999999999999995 554 88999999999999999853
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=2.8e-19 Score=178.97 Aligned_cols=154 Identities=16% Similarity=0.175 Sum_probs=84.7
Q ss_pred EEecccccCCccCCccccCCCCCCEEeCCCCcccccCC-ccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccC
Q 040398 68 YLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLP-MELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGS 146 (732)
Q Consensus 68 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 146 (732)
++++++|.++ .+|..+. ..++.|+|++|+|++..| ..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4444444444 3343332 223444444444443322 22444444555555555544444444555555555555555
Q ss_pred CCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccC
Q 040398 147 GLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGEL 224 (732)
Q Consensus 147 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~ 224 (732)
++++..+..|..+++|++|+|++|.+..+.+..|..+++|++|+|++|+|++..|..+..+++|+.|+|++|++.+..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 555444444555555555555555555555555566667777777777777666777777888888888888877653
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=7e-20 Score=210.05 Aligned_cols=176 Identities=20% Similarity=0.309 Sum_probs=155.4
Q ss_pred CCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCC
Q 040398 13 IVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLE 91 (732)
Q Consensus 13 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 91 (732)
+.+|++|+.|+|++|.+. .+| .+..+ +|++|+|++|+|++..| +..+++|+.|+|++|.|+ .+| .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC-CCT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCC-CCh-hhccCCCCC
Confidence 567899999999999998 455 46666 89999999999995444 999999999999999998 455 799999999
Q ss_pred EEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcC
Q 040398 92 TLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 92 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 171 (732)
.|+|++|+|++ + ..+..|++|+.|+|++|+|++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|.
T Consensus 113 ~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 113 SLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 186 (605)
T ss_dssp EEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCC
Confidence 99999999995 4 4699999999999999999865 679999999999999999997666 9999999999999999
Q ss_pred CCCCCcccccCCCCccEEEcccccccCCcch
Q 040398 172 GPNQTFPMLRNMTGLTRIILRNCNIAGEIPE 202 (732)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 202 (732)
+.++ +.+..+++|+.|+|++|++.+....
T Consensus 187 i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 187 ISDL--RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp CCBC--GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred CCCC--hHHccCCCCCEEEccCCcCcCCccc
Confidence 9986 4689999999999999999864433
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=4.2e-19 Score=177.66 Aligned_cols=153 Identities=16% Similarity=0.219 Sum_probs=82.0
Q ss_pred ceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCc
Q 040398 43 KYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDN 122 (732)
Q Consensus 43 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 122 (732)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 44555555555 4444432 44555555555555333334444555555555555554444444444444444444444
Q ss_pred cccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcch
Q 040398 123 NFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPE 202 (732)
Q Consensus 123 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 202 (732)
+|+...+ ..|..+++|+.|+|++|.+..+.+..|..+++|+.|+|++|+|++..+.
T Consensus 91 ~l~~l~~------------------------~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 91 KITELPK------------------------SLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCCCCT------------------------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCccCH------------------------hHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 4443333 3344455555555555555555555555566666666667777655555
Q ss_pred hhcCCCCCcEEeCCCCcCcc
Q 040398 203 YIWGIKNLRFLDLSFNQLTG 222 (732)
Q Consensus 203 ~l~~l~~L~~L~Ls~N~l~g 222 (732)
.+..+++|+.|+|++|++..
T Consensus 147 ~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTCTTCCEEECCSSCEEC
T ss_pred HHhCCCCCCEEEeCCCCcCC
Confidence 66667777777777777764
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=4.3e-19 Score=177.62 Aligned_cols=152 Identities=22% Similarity=0.215 Sum_probs=128.2
Q ss_pred CCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCC
Q 040398 19 LETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSN 98 (732)
Q Consensus 19 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 98 (732)
-+.+++++|.++ .+|..+. .+|++|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~-~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP-ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC-TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CCEEEcCCCCcC-cCCCccC-cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 368999999999 6776554 47999999999999777779999999999999999999878999999999999999999
Q ss_pred cccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCC
Q 040398 99 RLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQG 172 (732)
Q Consensus 99 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 172 (732)
+|+...+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 99955555678899999999999999988888888888888888888888866666666666555555555544
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.7e-19 Score=194.76 Aligned_cols=178 Identities=19% Similarity=0.162 Sum_probs=156.7
Q ss_pred CCEEEcccCcCccccCccccccccceEecccccccccCCcccc-CCCCCCEEecccccCCccCCccccCCCCCCEEeCCC
Q 040398 19 LETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLG-NITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSS 97 (732)
Q Consensus 19 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 97 (732)
-+.+++++|+++ .+|..+.. .+++|+|++|+|++..+..+. ++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~~-~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLPS-YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCCT-TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCCC-CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 468999999999 67765432 589999999999977777787 999999999999999976677899999999999999
Q ss_pred CcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccc---cCccCCCeeeccCcCCCC
Q 040398 98 NRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSI---SALDKLNQLRISDLQGPN 174 (732)
Q Consensus 98 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~ls~N~l~~ 174 (732)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..+ ..+++|+.|+|++|.+..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99997777789999999999999999998889999999999999999999995444445 679999999999999999
Q ss_pred CCcccccCCCC--ccEEEcccccccC
Q 040398 175 QTFPMLRNMTG--LTRIILRNCNIAG 198 (732)
Q Consensus 175 ~~~~~l~~l~~--L~~L~Ls~N~l~~ 198 (732)
++...+..++. |+.|+|++|.+.-
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 99888888887 4899999999974
No 359
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=5.5e-22 Score=226.15 Aligned_cols=125 Identities=18% Similarity=0.198 Sum_probs=100.9
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcc
Q 040398 113 NLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILR 192 (732)
Q Consensus 113 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls 192 (732)
.|+.|+|++|+|++ +|. ++.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+++++ .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp--~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVD--GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCG--GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCCCc--ccCCCCCCcEEECC
Confidence 58888888888875 565 888888888888888888 77888888888888888888888754 78888899999999
Q ss_pred cccccCCc-chhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEc
Q 040398 193 NCNIAGEI-PEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDL 253 (732)
Q Consensus 193 ~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdL 253 (732)
+|+|++.. |..+..+++|+.|+|++|+|++.+|... ..+..+++|+.||+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~-----------~l~~~lp~L~~L~l 567 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQE-----------RLAEMLPSVSSILT 567 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTT-----------HHHHHCTTCSEEEC
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHH-----------HHHHHCcccCccCC
Confidence 99998776 8889999999999999999988776431 22455678888864
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=5.2e-19 Score=176.99 Aligned_cols=158 Identities=14% Similarity=0.165 Sum_probs=118.1
Q ss_pred ccceEecccccccccCCccccCCCCCCEEecccccCCccCC-ccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEc
Q 040398 41 QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIP-RELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRI 119 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 119 (732)
.-+++++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|..+++|+.|+|++|+|++..+..|..+++|+.|+|
T Consensus 12 ~~~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 88 (220)
T 2v70_A 12 EGTTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILL 88 (220)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEEC
Confidence 3457777777777 5666553 345777777777775434 34677777777777777777666667777778888888
Q ss_pred cCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCC
Q 040398 120 NDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGE 199 (732)
Q Consensus 120 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 199 (732)
++|+|++..+..|..+++|++|+|++|++++..|..+..+++|+.|+|++|.++.+.+..|..+++|+.|+|++|.+...
T Consensus 89 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 89 TSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp CSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 88887777777777788888888888888777777788888888888888888887777788888888888888888765
Q ss_pred cc
Q 040398 200 IP 201 (732)
Q Consensus 200 ~p 201 (732)
.+
T Consensus 169 c~ 170 (220)
T 2v70_A 169 CY 170 (220)
T ss_dssp GG
T ss_pred Cc
Confidence 44
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1.5e-18 Score=174.82 Aligned_cols=157 Identities=22% Similarity=0.205 Sum_probs=103.1
Q ss_pred ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcc
Q 040398 41 QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIN 120 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 120 (732)
..+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+.|+|+
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 4566777777776 6666553 677777777777776666677777777777777777764444556677777777777
Q ss_pred CccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCc
Q 040398 121 DNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEI 200 (732)
Q Consensus 121 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 200 (732)
+|+|++..+..|..+++|+.|+|++|+++ .+|..+..+ ++|+.|+|++|+|++..
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l------------------------~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERL------------------------THLTHLALDQNQLKSIP 151 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGC------------------------TTCSEEECCSSCCCCCC
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccC------------------------CCCCEEECCCCcCCccC
Confidence 77777655566666777777777777666 455555444 45555556666666444
Q ss_pred chhhcCCCCCcEEeCCCCcCcccCC
Q 040398 201 PEYIWGIKNLRFLDLSFNQLTGELP 225 (732)
Q Consensus 201 p~~l~~l~~L~~L~Ls~N~l~g~~p 225 (732)
+..+..+++|+.|+|++|++.+..+
T Consensus 152 ~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 152 HGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred HHHHhCCCCCCEEEeeCCCccCCcc
Confidence 4556666677777777777665443
No 362
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=1.7e-18 Score=174.40 Aligned_cols=153 Identities=18% Similarity=0.196 Sum_probs=106.5
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCc
Q 040398 91 ETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDL 170 (732)
Q Consensus 91 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 170 (732)
+.+++++++++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+++...+..|..+++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 44555555554 4444332 45555555555555555555555555555555555555444445566666666666666
Q ss_pred CCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCe
Q 040398 171 QGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQS 250 (732)
Q Consensus 171 ~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~ 250 (732)
.++.++...|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.. +..+++|+.
T Consensus 99 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~--------------~~~l~~L~~ 163 (229)
T 3e6j_A 99 QLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA--------------FDRLSSLTH 163 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT--------------TTTCTTCCE
T ss_pred cCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH--------------HhCCCCCCE
Confidence 666666666777888999999999999 78999999999999999999999766543 567789999
Q ss_pred EEccCCcCcCC
Q 040398 251 LDLSYNNFTWQ 261 (732)
Q Consensus 251 LdLs~N~l~~~ 261 (732)
|+|++|++++.
T Consensus 164 L~l~~N~~~c~ 174 (229)
T 3e6j_A 164 AYLFGNPWDCE 174 (229)
T ss_dssp EECTTSCBCTT
T ss_pred EEeeCCCccCC
Confidence 99999988743
No 363
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=6.4e-19 Score=173.14 Aligned_cols=154 Identities=19% Similarity=0.209 Sum_probs=102.6
Q ss_pred ccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCC
Q 040398 60 LGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLN 139 (732)
Q Consensus 60 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 139 (732)
...+++|++|+|++|.++ .+| .+..+++|++|++++|.++ . +..+..+++|+.|++++|++++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356677888888888877 566 5777778888888877665 2 33677777777777777777766677777777777
Q ss_pred EEEcccCCCcCcCCccccCccCCCeeeccCcC-CCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCC
Q 040398 140 RLEIQGSGLEGPIPPSISALDKLNQLRISDLQ-GPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFN 218 (732)
Q Consensus 140 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 218 (732)
.|+|++|++++..|..+..+++|+.|++++|. +..++ .+..+++|++|+|++|++++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~--~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM--PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG--GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH--hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 77777777776666666666666666666665 44442 45566666666666666663 33 4555666666666666
Q ss_pred cCc
Q 040398 219 QLT 221 (732)
Q Consensus 219 ~l~ 221 (732)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 654
No 364
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.4e-18 Score=170.69 Aligned_cols=153 Identities=19% Similarity=0.276 Sum_probs=125.3
Q ss_pred ccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCE
Q 040398 38 ASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTD 116 (732)
Q Consensus 38 ~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 116 (732)
..+ +|++|++++|+++ .+| .+..+++|++|+|++|.++ . +..+..+++|++|+|++|++++..|..+..+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 444 6888899888888 667 6888889999999998776 3 347888889999999999998777888888999999
Q ss_pred EEccCccccccCCccccCCCCCCEEEcccCC-CcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEccccc
Q 040398 117 FRINDNNFNGSAPDFIQSWTQLNRLEIQGSG-LEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCN 195 (732)
Q Consensus 117 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~ 195 (732)
|++++|++++..|..+..+++|+.|+|++|+ ++ .+| .+..+++|+.|++++|.+.+.. .+..+++|++|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 9999999988788888889999999999998 55 555 6888899999999999988765 68888999999999999
Q ss_pred ccC
Q 040398 196 IAG 198 (732)
Q Consensus 196 l~~ 198 (732)
|.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=6e-19 Score=181.62 Aligned_cols=168 Identities=18% Similarity=0.262 Sum_probs=103.5
Q ss_pred ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcc
Q 040398 41 QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIN 120 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 120 (732)
++..+++++|.++ .++ .+..+++|++|+|++|.++ .++ .+..+++|+.|+|++|+|++ ++. +..+++|+.|+|+
T Consensus 20 ~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECC
Confidence 4667777777777 333 4667777777777777777 555 57777777777777777774 333 7777777777777
Q ss_pred CccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCc
Q 040398 121 DNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEI 200 (732)
Q Consensus 121 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~ 200 (732)
+|++++ +|.... ++|+.|+|++|++++. ..+..+++|+.|++++|++++++ .+..+++|++|+|++|+|++.
T Consensus 94 ~N~l~~-l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKN-LNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSC-CTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCC-cCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcCcch-
Confidence 777764 332222 6677777777776642 23555555555555555555442 355555555555555555533
Q ss_pred chhhcCCCCCcEEeCCCCcCccc
Q 040398 201 PEYIWGIKNLRFLDLSFNQLTGE 223 (732)
Q Consensus 201 p~~l~~l~~L~~L~Ls~N~l~g~ 223 (732)
..+..+++|+.|+|++|++++.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 3445555555555555555533
No 366
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.1e-19 Score=213.33 Aligned_cols=222 Identities=19% Similarity=0.166 Sum_probs=121.3
Q ss_pred CCCCEEEcccCcCccccCcccccc-----ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCC
Q 040398 17 PYLETVDFAYNYLHGSIPREWASM-----QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLE 91 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~~~~p~~~~~~-----~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 91 (732)
++++.|+|..|.+.......+..+ ++..++++.|++. ..|..+..+++|+.|+|++|.|. .+|..+.++++|+
T Consensus 173 ~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~ 250 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLT 250 (727)
T ss_dssp --------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCS
T ss_pred CccceEEeeCCCCCcchhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCC
Confidence 568889999998885322333322 2444555556666 66788899999999999999998 8888888999999
Q ss_pred EEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcC
Q 040398 92 TLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 92 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 171 (732)
+|+|++|+|+ .+|..+.+|++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|.|+ .+|..|..+++|+.|+|++|.
T Consensus 251 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 251 RLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp CCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSC
T ss_pred EEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCc
Confidence 9999999999 88989999999999999999998 77989999999999999999997 778889999999999999999
Q ss_pred CCCCCcccccCCCC-ccEEEcccccccCCcchhhcCCCCCcEEeCCCC----cCcccCCCCCccCcchhhHHHHHHhccC
Q 040398 172 GPNQTFPMLRNMTG-LTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFN----QLTGELPDVAVPADLKFTQILMFIRGVY 246 (732)
Q Consensus 172 l~~~~~~~l~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N----~l~g~~p~~~~~~~l~~~~~~~~~~~l~ 246 (732)
+++..+..+..+.. +..|+|++|.+++.+|.. |..|+++.| ...|.+|... ...+.++.
T Consensus 328 l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~----------~~~~~~l~ 391 (727)
T 4b8c_D 328 LEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQST----------EHLATDLA 391 (727)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------------------------------------------
T ss_pred cCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccc----------cchhhccc
Confidence 98877776655432 334788999998887764 455667766 3333333321 01133455
Q ss_pred CCCeEEccCCcCc
Q 040398 247 EHQSLDLSYNNFT 259 (732)
Q Consensus 247 ~L~~LdLs~N~l~ 259 (732)
.+....+++|-+.
T Consensus 392 ~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 392 KRTFTVLSYNTLC 404 (727)
T ss_dssp ----------CCC
T ss_pred ccceeeeeccccc
Confidence 5666777788664
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=5.8e-19 Score=181.72 Aligned_cols=172 Identities=16% Similarity=0.249 Sum_probs=149.3
Q ss_pred CCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEE
Q 040398 62 NITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRL 141 (732)
Q Consensus 62 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 141 (732)
.+.+++.+++++|.++ .++ .+..+++|+.|++++|+|+ .+| .+..+++|+.|+|++|+|++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4677888999999998 455 6888999999999999998 666 78999999999999999996555 9999999999
Q ss_pred EcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCc
Q 040398 142 EIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLT 221 (732)
Q Consensus 142 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 221 (732)
+|++|++++ +|.... ++|+.|++++|.+++. +.+..+++|+.|+|++|+|++ ++ .+..+++|+.|+|++|+++
T Consensus 91 ~L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCc
Confidence 999999985 444333 9999999999999986 368999999999999999995 44 6889999999999999999
Q ss_pred ccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCC
Q 040398 222 GELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQS 262 (732)
Q Consensus 222 g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~ 262 (732)
+. +. +..+++|+.|+|++|++++.+
T Consensus 164 ~~-~~---------------l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 164 NT-GG---------------LTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp BC-TT---------------STTCCCCCEEEEEEEEEECCC
T ss_pred ch-HH---------------hccCCCCCEEeCCCCcccCCc
Confidence 76 21 567789999999999998764
No 368
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.76 E-value=9.3e-19 Score=179.65 Aligned_cols=139 Identities=17% Similarity=0.127 Sum_probs=107.0
Q ss_pred CCCcccceecccCceEEEEEEE-cCCeE--EEEEEccccccc------------------------chHHHHHHHHHHhc
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQL-TDGTI--IAVKLLSSKSRQ------------------------GNREFLNEIGTISC 566 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~-~~g~~--vAvK~~~~~~~~------------------------~~~~~~~E~~~l~~ 566 (732)
.-|++.+.||+|+||.||+|+. .+|+. ||||+++..... ....+.+|++.+.+
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3467789999999999999998 68999 999987543111 11367899999999
Q ss_pred CCCCce--eeeeeeEEeCCEEEEEEEecCC-C----chhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHH-hCCCCce
Q 040398 567 LQHPNL--VKLYGCCIEGDQLMLVYEYLEN-N----SLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLH-EESRFKI 638 (732)
Q Consensus 567 l~H~nI--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH-~~~~~~i 638 (732)
++|+++ +.+++. +..++||||+.+ | +|.++... .++..+..++.||+.||+||| +.+ |
T Consensus 127 l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~g---i 192 (258)
T 1zth_A 127 AKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEAE---L 192 (258)
T ss_dssp HHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTSC---E
T ss_pred HHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHCC---E
Confidence 988865 233332 346899999952 4 67665421 224456789999999999999 775 9
Q ss_pred EeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 639 VHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 639 iH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
+||||||+|||+++ .++|+|||+|....
T Consensus 193 vHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 193 VHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp ECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred EeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 99999999999998 99999999997543
No 369
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=5.6e-21 Score=217.79 Aligned_cols=185 Identities=14% Similarity=0.097 Sum_probs=139.2
Q ss_pred cCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCc-------------ccccCCccccCCCCCCEEE-ccCccccc
Q 040398 61 GNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNR-------------LIGNLPMELVKLKNLTDFR-INDNNFNG 126 (732)
Q Consensus 61 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~-------------l~~~~p~~l~~l~~L~~L~-L~~N~l~~ 126 (732)
..+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 44566666666666665 566666666666666665553 3445566666666666666 44443321
Q ss_pred cCCc------cccC--CCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccC
Q 040398 127 SAPD------FIQS--WTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAG 198 (732)
Q Consensus 127 ~~p~------~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~ 198 (732)
++. .+.. ...|+.|+|++|+|++ +|. +..+++|+.|+|++|.++.+ +..+..+++|+.|+|++|+|++
T Consensus 425 -L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~l-p~~~~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 425 -LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRAL-PPALAALRCLEVLQASDNALEN 500 (567)
T ss_dssp -HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCC-CGGGGGCTTCCEEECCSSCCCC
T ss_pred -hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccccc-chhhhcCCCCCEEECCCCCCCC
Confidence 110 0111 1359999999999995 676 99999999999999999955 5589999999999999999996
Q ss_pred CcchhhcCCCCCcEEeCCCCcCcccC-CCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCCCc
Q 040398 199 EIPEYIWGIKNLRFLDLSFNQLTGEL-PDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQP 266 (732)
Q Consensus 199 ~~p~~l~~l~~L~~L~Ls~N~l~g~~-p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~ 266 (732)
+| .+..+++|+.|+|++|+|++.+ |.. ++++++|+.|+|++|+|++.+|...
T Consensus 501 -lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~--------------l~~l~~L~~L~L~~N~l~~~~~~~~ 553 (567)
T 1dce_A 501 -VD-GVANLPRLQELLLCNNRLQQSAAIQP--------------LVSCPRLVLLNLQGNSLCQEEGIQE 553 (567)
T ss_dssp -CG-GGTTCSSCCEEECCSSCCCSSSTTGG--------------GGGCTTCCEEECTTSGGGGSSSCTT
T ss_pred -Cc-ccCCCCCCcEEECCCCCCCCCCCcHH--------------HhcCCCCCEEEecCCcCCCCccHHH
Confidence 77 8999999999999999999886 754 7788999999999999999987643
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1.2e-17 Score=163.23 Aligned_cols=120 Identities=21% Similarity=0.328 Sum_probs=63.5
Q ss_pred ceEecccccccccCCccccCCCCCCEEecccccCCccCCc-cccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccC
Q 040398 43 KYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPR-ELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIND 121 (732)
Q Consensus 43 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 121 (732)
++|++++|+++ .+|..+.. +|++|+|++|+|++..+. .+..+++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 55666666664 55554432 556666666665533332 255555555555555555555555555555555555555
Q ss_pred ccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCee
Q 040398 122 NNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQL 165 (732)
Q Consensus 122 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 165 (732)
|+|++..+..|..+++|+.|+|++|++++..|..+..+++|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 131 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSL 131 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEE
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEE
Confidence 55555555555555555555555555554444444444333333
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.72 E-value=1.7e-18 Score=203.44 Aligned_cols=184 Identities=22% Similarity=0.183 Sum_probs=129.1
Q ss_pred ccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccC
Q 040398 32 SIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVK 110 (732)
Q Consensus 32 ~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 110 (732)
..|..+..+ +|++|+|++|++. .+|..++++++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+ .+|..+.+
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 456777777 7999999999999 89998999999999999999999 99999999999999999999999 88999999
Q ss_pred CCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccC-CCeeeccCcCCCCCCcccccCCCCccEE
Q 040398 111 LKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDK-LNQLRISDLQGPNQTFPMLRNMTGLTRI 189 (732)
Q Consensus 111 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~ls~N~l~~~~~~~l~~l~~L~~L 189 (732)
|++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++..+. .|..|
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l 364 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFI 364 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C----
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------cccee
Confidence 999999999999997 77888999999999999999999999988876543 34588999999876654 56777
Q ss_pred Ecccc--------cccCCcchhhcCCCCCcEEeCCCCcCcccCC
Q 040398 190 ILRNC--------NIAGEIPEYIWGIKNLRFLDLSFNQLTGELP 225 (732)
Q Consensus 190 ~Ls~N--------~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 225 (732)
+++.| .|.+..+..+..+.++....+++|.+.+...
T Consensus 365 ~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~~ 408 (727)
T 4b8c_D 365 EINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHYA 408 (727)
T ss_dssp -------------------------------------CCCGGGC
T ss_pred EeecccccccccCCccccccchhhcccccceeeeeccccccccC
Confidence 88877 4444455556677788888999999875443
No 372
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.68 E-value=4.8e-18 Score=195.59 Aligned_cols=239 Identities=11% Similarity=0.081 Sum_probs=153.3
Q ss_pred cCCccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCC-ccccCCCCCCEEecccccCC-ccCCccc
Q 040398 8 TLPPQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIP-SHLGNITSLTYLDLEENQFS-GTIPREL 84 (732)
Q Consensus 8 ~lP~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~-~~~p~~l 84 (732)
..+..+..+++|+.|+++++... .+|..+..+ +|++|+|++|.+++... ..+.++++|++|+|+ |.+. +.++..+
T Consensus 261 ~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~ 338 (592)
T 3ogk_B 261 EKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLA 338 (592)
T ss_dssp TSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHH
T ss_pred HHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHH
Confidence 34455666666777766665333 556656555 68888888777664333 345677788888887 3333 2233344
Q ss_pred cCCCCCCEEeCC-----------CCccccc-CCccccCCCCCCEEEccCccccccCCccccC-CCCCCEEEcc----cCC
Q 040398 85 GNLVNLETLRLS-----------SNRLIGN-LPMELVKLKNLTDFRINDNNFNGSAPDFIQS-WTQLNRLEIQ----GSG 147 (732)
Q Consensus 85 ~~l~~L~~L~L~-----------~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~ 147 (732)
..+++|++|+|+ .|.+++. ++.....+++|+.|+++.|.+++..+..+.. +++|+.|+|+ .|.
T Consensus 339 ~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~ 418 (592)
T 3ogk_B 339 QYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREER 418 (592)
T ss_dssp HHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSC
T ss_pred HhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCcc
Confidence 567778888887 3566543 2222445778888888777777666666654 7788888885 566
Q ss_pred CcCc-----CCccccCccCCCeeeccCcC--CCCCCccccc-CCCCccEEEcccccccC-CcchhhcCCCCCcEEeCCCC
Q 040398 148 LEGP-----IPPSISALDKLNQLRISDLQ--GPNQTFPMLR-NMTGLTRIILRNCNIAG-EIPEYIWGIKNLRFLDLSFN 218 (732)
Q Consensus 148 l~~~-----~p~~~~~l~~L~~L~ls~N~--l~~~~~~~l~-~l~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~Ls~N 218 (732)
+++. ++..+..+++|+.|+++.|. +++.....+. .+++|++|+|++|++++ .++..+..+++|+.|+|++|
T Consensus 419 l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n 498 (592)
T 3ogk_B 419 ITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGC 498 (592)
T ss_dssp CSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESC
T ss_pred ccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCC
Confidence 6643 33335667788888886433 4443333333 36778888888888875 34555667888888888888
Q ss_pred cCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCC
Q 040398 219 QLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQ 261 (732)
Q Consensus 219 ~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~ 261 (732)
.+++.. +......+++|+.|+|++|+++..
T Consensus 499 ~l~~~~-------------~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 499 CFSERA-------------IAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CCBHHH-------------HHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CCcHHH-------------HHHHHHhcCccCeeECcCCcCCHH
Confidence 876331 223355678888888888887644
No 373
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=1.2e-16 Score=156.22 Aligned_cols=132 Identities=18% Similarity=0.258 Sum_probs=83.1
Q ss_pred CEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCc-cccCCCCCCEEEccCccccccCCccccCCCCCCEEEccc
Q 040398 67 TYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPM-ELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQG 145 (732)
Q Consensus 67 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 145 (732)
++|++++|.|+ .+|..+.. +|++|+|++|+|++..+. .+..+++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56777777775 66665543 666777777766644332 256666666666666666655566666666666666666
Q ss_pred CCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCC
Q 040398 146 SGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELP 225 (732)
Q Consensus 146 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 225 (732)
|++++..+. .|..+++|++|+|++|+|++.+|..+..+++|+.|+|++|++++..+
T Consensus 88 N~l~~~~~~------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNK------------------------MFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSS------------------------SSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHH------------------------HhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 665544444 44455566666667777776667777777777777777777776543
No 374
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.7e-16 Score=151.47 Aligned_cols=131 Identities=16% Similarity=0.172 Sum_probs=66.6
Q ss_pred CCCEEeCCCCccc-ccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeec
Q 040398 89 NLETLRLSSNRLI-GNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRI 167 (732)
Q Consensus 89 ~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 167 (732)
+|+.|+|++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|+|++|++++.+|..+..+++|+.|++
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3444444444443 33444444444444444444444432 33444444444444444444434444444444444444
Q ss_pred cCcCCCCCCc-ccccCCCCccEEEcccccccCCcc---hhhcCCCCCcEEeCCCCcCc
Q 040398 168 SDLQGPNQTF-PMLRNMTGLTRIILRNCNIAGEIP---EYIWGIKNLRFLDLSFNQLT 221 (732)
Q Consensus 168 s~N~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~Ls~N~l~ 221 (732)
++|.+++.+. ..+..+++|+.|+|++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 4444444322 445556666666777777764443 35666777777777777665
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=2.5e-16 Score=150.21 Aligned_cols=131 Identities=22% Similarity=0.219 Sum_probs=59.8
Q ss_pred CCCCEEEcccCcCc-cccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEe
Q 040398 17 PYLETVDFAYNYLH-GSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLR 94 (732)
Q Consensus 17 ~~L~~L~Ls~N~l~-~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 94 (732)
++|++|+|++|.++ +.+|..+..+ +|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 3444444444 455555555554422 4444445555555555555433444444444555555
Q ss_pred CCCCcccccC-CccccCCCCCCEEEccCccccccCC---ccccCCCCCCEEEcccCCCc
Q 040398 95 LSSNRLIGNL-PMELVKLKNLTDFRINDNNFNGSAP---DFIQSWTQLNRLEIQGSGLE 149 (732)
Q Consensus 95 L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 149 (732)
|++|+|++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555444211 1344444444444444444443322 23444444444444444443
No 376
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.65 E-value=1.4e-17 Score=191.79 Aligned_cols=200 Identities=16% Similarity=0.127 Sum_probs=135.1
Q ss_pred CCCCCCEEEcccCcCccccCcccccc--c-cceEeccccc-ccc-cCCccccCCCCCCEEecccccCCcc----CCcccc
Q 040398 15 NLPYLETVDFAYNYLHGSIPREWASM--Q-LKYISVFANR-LSG-NIPSHLGNITSLTYLDLEENQFSGT----IPRELG 85 (732)
Q Consensus 15 ~l~~L~~L~Ls~N~l~~~~p~~~~~~--~-L~~L~L~~n~-l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~ 85 (732)
++++|++|+|++|.+++..+..+... + |++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 78899999999998887777766654 4 9999998886 221 2233345788999999999988755 334456
Q ss_pred CCCCCCEEeCCCCccc----ccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCc---CcCCccccC
Q 040398 86 NLVNLETLRLSSNRLI----GNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLE---GPIPPSISA 158 (732)
Q Consensus 86 ~l~~L~~L~L~~N~l~----~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~ 158 (732)
++++|++|+|++|.++ +.++..+.++++|+.|++++|.+.+ +|..+..+++|+.|+++.+... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 7889999999999887 3455556778999999999998875 6677788888888888754322 233344555
Q ss_pred ccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcc-hhhcCCCCCcEEeCC
Q 040398 159 LDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIP-EYIWGIKNLRFLDLS 216 (732)
Q Consensus 159 l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls 216 (732)
+++|+.|+++++.. ...+..+..+++|++|+|++|.+++... ..+..+++|+.|+|+
T Consensus 269 ~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 269 PRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp CTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred cccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 56666666655422 2223345556666666666666554333 234556666666666
No 377
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=2.1e-16 Score=147.60 Aligned_cols=126 Identities=20% Similarity=0.258 Sum_probs=83.5
Q ss_pred ccceEeccccccc-ccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEc
Q 040398 41 QLKYISVFANRLS-GNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRI 119 (732)
Q Consensus 41 ~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 119 (732)
+|++|++++|+++ +.+|..+..+++|++|+|++|.+++. ..+.++++|++|+|++|++++.+|..+..+++|+.|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 4677777777776 56666667777777777777777643 56667777777777777777556666666777777777
Q ss_pred cCcccccc-CCccccCCCCCCEEEcccCCCcCcCC---ccccCccCCCeeecc
Q 040398 120 NDNNFNGS-APDFIQSWTQLNRLEIQGSGLEGPIP---PSISALDKLNQLRIS 168 (732)
Q Consensus 120 ~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~ls 168 (732)
++|.+++. .+..+..+++|+.|++++|.+++..+ ..+..+++|+.|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 77777643 23566667777777777777664443 355666666666554
No 378
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.1e-15 Score=149.36 Aligned_cols=127 Identities=19% Similarity=0.232 Sum_probs=62.2
Q ss_pred EEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCC
Q 040398 68 YLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSG 147 (732)
Q Consensus 68 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 147 (732)
++++++|.|+ .+|..+. ++|++|+|++|+|+ .+|..+.++++|+.|+|++|.|++..+..|.++++|+.|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4444444444 4443332 34455555555554 444444444555555555554444444444444444444444444
Q ss_pred CcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcc
Q 040398 148 LEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTG 222 (732)
Q Consensus 148 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 222 (732)
+++..+. .|..+++|++|+|++|+|+...+..+..+++|+.|+|++|++..
T Consensus 90 l~~i~~~------------------------~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPR------------------------TFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTT------------------------TTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHH------------------------HhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 4433333 33344445555555555554334445566666666666666653
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=149.16 Aligned_cols=126 Identities=21% Similarity=0.305 Sum_probs=90.0
Q ss_pred cceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccC
Q 040398 42 LKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIND 121 (732)
Q Consensus 42 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 121 (732)
-+++++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 456777777777 6676553 57788888888887 6777777788888888888888766666777888888888888
Q ss_pred ccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcC
Q 040398 122 NNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 122 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 171 (732)
|+|++..|..|..+++|+.|+|++|+++...+..|..+++|+.|+|++|.
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 137 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANP 137 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCC
Confidence 88877777778888888888888887774444445555554444444443
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=3.5e-16 Score=146.02 Aligned_cols=128 Identities=20% Similarity=0.303 Sum_probs=67.3
Q ss_pred CCCCEEecccccCC-ccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEE
Q 040398 64 TSLTYLDLEENQFS-GTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLE 142 (732)
Q Consensus 64 ~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 142 (732)
++|++|++++|.++ +.+|..+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666665 45555555666666666666665533 4455555555555555555544444444455555555
Q ss_pred cccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcc---hhhcCCCCCcEEeCC
Q 040398 143 IQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIP---EYIWGIKNLRFLDLS 216 (732)
Q Consensus 143 Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~~L~Ls 216 (732)
+++|.+++. + .+..+..+++|++|+|++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~-~----------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDL-S----------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSH-H----------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCCh-H----------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555544421 0 11234444555555555555554433 345555566655554
No 381
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.63 E-value=1.3e-16 Score=170.41 Aligned_cols=145 Identities=12% Similarity=0.115 Sum_probs=102.6
Q ss_pred HHHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEccccccc--------------chHH--------HHHHHHHHh
Q 040398 508 QIRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQ--------------GNRE--------FLNEIGTIS 565 (732)
Q Consensus 508 ~~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~--------------~~~~--------~~~E~~~l~ 565 (732)
.+.....-|++.+.||+|++|.||+|...+|+.||||+++..... .... ...|...+.
T Consensus 89 ~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~ 168 (397)
T 4gyi_A 89 THAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK 168 (397)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence 333444458999999999999999999999999999987532110 0111 234556666
Q ss_pred cCCCCceeeeeeeEEeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCC
Q 040398 566 CLQHPNLVKLYGCCIEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKA 645 (732)
Q Consensus 566 ~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp 645 (732)
++.+.++....-+... ..++||||++|++|..+.. . .....++.||+.+|.|||+.| ||||||||
T Consensus 169 rL~~~gv~vp~p~~~~--~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH~~g---IVHrDLKp 233 (397)
T 4gyi_A 169 ALYEEGFPVPEPIAQS--RHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLAKHG---LIHGDFNE 233 (397)
T ss_dssp HHHHTTCSCCCEEEEE--TTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHHHTT---EECSCCST
T ss_pred HHHhcCCCCCeeeecc--CceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHHHCC---CcCCCCCH
Confidence 6654443222112122 2379999999988876441 1 123568899999999999986 99999999
Q ss_pred CCeEEcCCCC----------eEEEeeecceeC
Q 040398 646 TNVLLDRDLN----------PKISDFGLAKLD 667 (732)
Q Consensus 646 ~NILl~~~~~----------~kL~DfGla~~~ 667 (732)
.|||+++++. +.|+||+-+...
T Consensus 234 ~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 234 FNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp TSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 9999988763 899999977543
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=2.5e-15 Score=144.62 Aligned_cols=67 Identities=16% Similarity=0.137 Sum_probs=35.8
Q ss_pred ccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCC
Q 040398 159 LDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELP 225 (732)
Q Consensus 159 l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p 225 (732)
+++|+.|+|++|.++..+...+..+++|++|+|++|+|++..+..+..+++|+.|+|++|++++..|
T Consensus 75 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 75 LTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 3333333333333333333334445556666666666664444445666777777777777766544
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=2.3e-15 Score=144.88 Aligned_cols=133 Identities=19% Similarity=0.217 Sum_probs=80.5
Q ss_pred CCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEccc
Q 040398 66 LTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQG 145 (732)
Q Consensus 66 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 145 (732)
.+.+++++|+++ .+|..+. ++|+.|+|++|++++..+..+..+++|+.|++++|+|++..+..+..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 456666666666 4554333 4666666666666644444556666666666666666655555556666666666666
Q ss_pred CCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcc
Q 040398 146 SGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIP 201 (732)
Q Consensus 146 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p 201 (732)
|++++..+..+..+++|+.|++++|.++.++...+..+++|++|+|++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 66665545555666666666666666666555555666666666666666665443
No 384
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=9.8e-16 Score=162.97 Aligned_cols=250 Identities=14% Similarity=0.063 Sum_probs=134.4
Q ss_pred CcccCCccCCC--CCCCCEEEcccCcCccccCccccc-c-ccceEeccccccc--cc-----------------C-Cccc
Q 040398 5 LPGTLPPQIVN--LPYLETVDFAYNYLHGSIPREWAS-M-QLKYISVFANRLS--GN-----------------I-PSHL 60 (732)
Q Consensus 5 ~~g~lP~~l~~--l~~L~~L~Ls~N~l~~~~p~~~~~-~-~L~~L~L~~n~l~--~~-----------------~-p~~l 60 (732)
-+|+++..+.. +.+|+.|.++++ +.......+.. + +|++|||++|++. .. + +..|
T Consensus 11 ~~g~l~~~l~~~~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF 89 (329)
T 3sb4_A 11 KPGTLISMMTEEEANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAF 89 (329)
T ss_dssp STTCGGGGSCHHHHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTT
T ss_pred CCCcHHhhccchhhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHh
Confidence 35666666654 667777777754 22111122222 3 5778888887776 11 1 2234
Q ss_pred cC--------CCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccc----cccC
Q 040398 61 GN--------ITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNF----NGSA 128 (732)
Q Consensus 61 ~~--------l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l----~~~~ 128 (732)
.+ +++|++|+|.+ .++..-+.+|.+|++|+.|+|++|.++...+..|..+.++..+.+..+.. ....
T Consensus 90 ~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~ 168 (329)
T 3sb4_A 90 SNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWE 168 (329)
T ss_dssp EEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTT
T ss_pred cccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccc
Confidence 44 55566666655 55523333455555566666655555544444455554444444443211 1111
Q ss_pred CccccCCCCCC-EEEc-------------------------ccCCCcCcCCccc-cCccCCCeeeccCcCCCCCCccccc
Q 040398 129 PDFIQSWTQLN-RLEI-------------------------QGSGLEGPIPPSI-SALDKLNQLRISDLQGPNQTFPMLR 181 (732)
Q Consensus 129 p~~~~~l~~L~-~L~L-------------------------s~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~~~~l~ 181 (732)
...|.++..|+ .+.+ .++-.. .....+ ..+++|+.|+|++|.++.++...|.
T Consensus 169 ~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~ 247 (329)
T 3sb4_A 169 HFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFA 247 (329)
T ss_dssp TSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTT
T ss_pred ccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhh
Confidence 11222222222 1111 111000 000000 1267788888888888888777888
Q ss_pred CCCCccEEEcccccccCCcchhhcCCCCCc-EEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcC
Q 040398 182 NMTGLTRIILRNCNIAGEIPEYIWGIKNLR-FLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTW 260 (732)
Q Consensus 182 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~-~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~ 260 (732)
++++|+.|+|++| ++...+..|.++++|+ .|++.+ .++...+.. |.++.+|+.|++++|+++.
T Consensus 248 ~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~a--------------F~~c~~L~~l~l~~n~i~~ 311 (329)
T 3sb4_A 248 QKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGA--------------FMGCDNLRYVLATGDKITT 311 (329)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTT--------------TTTCTTEEEEEECSSCCCE
T ss_pred CCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhh--------------hhCCccCCEEEeCCCccCc
Confidence 8888888888877 6645555777788887 888877 555333322 6677778888888888877
Q ss_pred CCCCCc-cccCCCC
Q 040398 261 QSPEQP-ACREKPN 273 (732)
Q Consensus 261 ~~p~~~-~~~~~~~ 273 (732)
..+..+ .|..+..
T Consensus 312 I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 312 LGDELFGNGVPSKL 325 (329)
T ss_dssp ECTTTTCTTCCCCE
T ss_pred cchhhhcCCcchhh
Confidence 766543 3444443
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=2.2e-17 Score=162.27 Aligned_cols=144 Identities=16% Similarity=0.149 Sum_probs=71.9
Q ss_pred cccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCC
Q 040398 83 ELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKL 162 (732)
Q Consensus 83 ~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 162 (732)
.+..+++|++|+|++|+|++ +| .+..+++|+.|++++|.++ .+|..+..+++|+.|+|++|+++
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~------------- 106 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA------------- 106 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECC-------------
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCC-------------
Confidence 44444445555555554442 33 4444445555555555444 33333333444444444444444
Q ss_pred CeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcc-hhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHH
Q 040398 163 NQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIP-EYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMF 241 (732)
Q Consensus 163 ~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~ 241 (732)
+++ .+..+++|++|+|++|++++..+ ..+..+++|+.|++++|++++.+|.... ........
T Consensus 107 -----------~l~--~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~----~~~~~~~~ 169 (198)
T 1ds9_A 107 -----------SLS--GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNA----TSEYRIEV 169 (198)
T ss_dssp -----------CHH--HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTT----HHHHHHHH
T ss_pred -----------cCC--ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccc----hHHHHHHH
Confidence 321 34445556666666666663222 3566667777777777777665543100 00111234
Q ss_pred HhccCCCCeEEccCCcCcCC
Q 040398 242 IRGVYEHQSLDLSYNNFTWQ 261 (732)
Q Consensus 242 ~~~l~~L~~LdLs~N~l~~~ 261 (732)
+..+++|+.|| +|+++..
T Consensus 170 ~~~l~~L~~Ld--~~~i~~~ 187 (198)
T 1ds9_A 170 VKRLPNLKKLD--GMPVDVD 187 (198)
T ss_dssp HHHCSSCSEEC--CGGGTTT
T ss_pred HHhCCCcEEEC--CcccCHH
Confidence 56667777776 6666544
No 386
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=1.1e-14 Score=154.72 Aligned_cols=221 Identities=11% Similarity=0.082 Sum_probs=156.4
Q ss_pred CCCCCEEEcccCcCc--------------------cccCccccc--------c-ccceEecccccccccCCccccCCCCC
Q 040398 16 LPYLETVDFAYNYLH--------------------GSIPREWAS--------M-QLKYISVFANRLSGNIPSHLGNITSL 66 (732)
Q Consensus 16 l~~L~~L~Ls~N~l~--------------------~~~p~~~~~--------~-~L~~L~L~~n~l~~~~p~~l~~l~~L 66 (732)
+++|++|||++|++. ...+..|.. + +|++|+|.+ +++..-+..|.+|++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 788999999999988 233446667 6 899999999 8885556789999999
Q ss_pred CEEecccccCCccCCccccCCCCCCEEeCCCCcc----cccCCccccCCCCCC-EEEcc---------------------
Q 040398 67 TYLDLEENQFSGTIPRELGNLVNLETLRLSSNRL----IGNLPMELVKLKNLT-DFRIN--------------------- 120 (732)
Q Consensus 67 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l----~~~~p~~l~~l~~L~-~L~L~--------------------- 120 (732)
++|+|++|.+....+..|.++.++..+.+..+.. ...-...|.++.+|+ .+.+.
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 9999999999856666888888888888776432 112233444455554 33332
Q ss_pred ----CccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCcc-EEEccccc
Q 040398 121 ----DNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLT-RIILRNCN 195 (732)
Q Consensus 121 ----~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~-~L~Ls~N~ 195 (732)
++-...........+++|+.|+|++|+++...+..|.++++|+.|+|.+| +..+....|.++++|+ .|+|.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 21110000001113778888888888888666667888888888888887 7778888888888888 888888 6
Q ss_pred ccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEc
Q 040398 196 IAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDL 253 (732)
Q Consensus 196 l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdL 253 (732)
++...+..|.++++|+.|++++|.++...+.. |.++++|+.|+.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~a--------------F~~~~~L~~ly~ 328 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDEL--------------FGNGVPSKLIYK 328 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTTT--------------TCTTCCCCEEEC
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchhh--------------hcCCcchhhhcc
Confidence 76455678888888888888888888554433 666777777753
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.6e-15 Score=143.43 Aligned_cols=134 Identities=19% Similarity=0.278 Sum_probs=72.5
Q ss_pred ccCCCCCCEEecccccCCccCCccccCC-CCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCC
Q 040398 60 LGNITSLTYLDLEENQFSGTIPRELGNL-VNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQL 138 (732)
Q Consensus 60 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 138 (732)
+.++.+|++|+|++|+++ .+|. +..+ ++|+.|+|++|+|++. ..+..+++|+.|+|++|+|++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 444555666666666655 3333 3332 2555555555555532 345555555555555555554333334455555
Q ss_pred CEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchh----hcCCCCCcEEe
Q 040398 139 NRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEY----IWGIKNLRFLD 214 (732)
Q Consensus 139 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~L~ 214 (732)
+.|+|++|+++ .+|. ...+..+++|+.|+|++|.++ .+|.. +..+++|+.||
T Consensus 91 ~~L~L~~N~i~-~~~~----------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld 146 (176)
T 1a9n_A 91 TELILTNNSLV-ELGD----------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLD 146 (176)
T ss_dssp CEEECCSCCCC-CGGG----------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEET
T ss_pred CEEECCCCcCC-cchh----------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeC
Confidence 55555555543 2222 123445566666667777766 44543 66777777777
Q ss_pred CCCCcCc
Q 040398 215 LSFNQLT 221 (732)
Q Consensus 215 Ls~N~l~ 221 (732)
+++|.+.
T Consensus 147 ~~~n~~~ 153 (176)
T 1a9n_A 147 FQKVKLK 153 (176)
T ss_dssp TEECCHH
T ss_pred CCcCCHH
Confidence 7777765
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=5.3e-15 Score=142.24 Aligned_cols=137 Identities=15% Similarity=0.180 Sum_probs=88.4
Q ss_pred CCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEE
Q 040398 110 KLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRI 189 (732)
Q Consensus 110 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L 189 (732)
++++|+.|++++|+++ .+|......++|+.|+|++|.+++. ..+..+++|+.|++++|.++.+++..+..+++|++|
T Consensus 17 ~~~~L~~L~l~~n~l~-~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp CTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred CcCCceEEEeeCCCCc-hhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 3444444444444444 2232222222455555555555432 345555566666666666655555556777889999
Q ss_pred EcccccccCCcch--hhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCC
Q 040398 190 ILRNCNIAGEIPE--YIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQ 261 (732)
Q Consensus 190 ~Ls~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~ 261 (732)
+|++|+|+ .+|. .+..+++|+.|+|++|+++. +|.. ....+..+++|+.||++.|.+...
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~----------~~~~~~~l~~L~~Ld~~~n~~~~~ 155 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHY----------RLYVIYKVPQVRVLDFQKVKLKER 155 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTH----------HHHHHHHCTTCSEETTEECCHHHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhH----------HHHHHHHCCccceeCCCcCCHHHH
Confidence 99999997 6776 88999999999999999984 3431 123477899999999999998654
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=1.1e-16 Score=157.12 Aligned_cols=136 Identities=19% Similarity=0.161 Sum_probs=91.8
Q ss_pred CCCCCEEeCCCCcccccCCc------cccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCcc
Q 040398 87 LVNLETLRLSSNRLIGNLPM------ELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALD 160 (732)
Q Consensus 87 l~~L~~L~L~~N~l~~~~p~------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 160 (732)
...++.++++.|.+++.+|. .+..+++|+.|+|++|++++ +| .+..+++|+.|++++|.++ .+|
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~------- 86 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIE------- 86 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCS-------
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-ccc-------
Confidence 34455555555555544443 55566666666666666653 34 4555555555555555554 222
Q ss_pred CCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHH
Q 040398 161 KLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILM 240 (732)
Q Consensus 161 ~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~ 240 (732)
..+..+++|++|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..
T Consensus 87 -----------------~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~-------------~~ 134 (198)
T 1ds9_A 87 -----------------NLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGE-------------ID 134 (198)
T ss_dssp -----------------SHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHH-------------HH
T ss_pred -----------------chhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhH-------------HH
Confidence 234455788999999999995 66 68899999999999999984321 12
Q ss_pred HHhccCCCCeEEccCCcCcCCCCC
Q 040398 241 FIRGVYEHQSLDLSYNNFTWQSPE 264 (732)
Q Consensus 241 ~~~~l~~L~~LdLs~N~l~~~~p~ 264 (732)
.+..+++|+.|++++|++++.+|.
T Consensus 135 ~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 135 KLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHTTTTTCSEEEECSCHHHHHHHT
T ss_pred HHhcCCCCCEEEecCCcccccccc
Confidence 377889999999999999998776
No 390
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.51 E-value=3.8e-16 Score=179.78 Aligned_cols=203 Identities=12% Similarity=0.042 Sum_probs=106.1
Q ss_pred ccceEecccccccccCC-ccccCCCCCCEEecccccCCcc-CCccccCCCCCCEEeC---------CCCcccccCCcccc
Q 040398 41 QLKYISVFANRLSGNIP-SHLGNITSLTYLDLEENQFSGT-IPRELGNLVNLETLRL---------SSNRLIGNLPMELV 109 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~-~p~~l~~l~~L~~L~L---------~~N~l~~~~p~~l~ 109 (732)
+|++|+|++|.+++... ..+.++++|++|+|++| +.+. ++.....+++|++|+| +.|.+++.....+.
T Consensus 290 ~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~ 368 (594)
T 2p1m_B 290 RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVS 368 (594)
T ss_dssp TCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHH
T ss_pred CCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHH
Confidence 56666666666553322 22445666666666665 3311 1112224566666666 23344432222222
Q ss_pred -CCCCCCEEEccCccccccCCcccc-CCCCCCEEEcc--c----CCCcCc-----CCccccCccCCCeeeccCcCCCCCC
Q 040398 110 -KLKNLTDFRINDNNFNGSAPDFIQ-SWTQLNRLEIQ--G----SGLEGP-----IPPSISALDKLNQLRISDLQGPNQT 176 (732)
Q Consensus 110 -~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~ls~N~l~~~~ 176 (732)
.+++|+.|.+..|.+++.....+. .+++|+.|+|+ + |.++.. ++..+..+++|+.|+|++ .+++..
T Consensus 369 ~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~ 447 (594)
T 2p1m_B 369 MGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKV 447 (594)
T ss_dssp HHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHH
T ss_pred HhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHH
Confidence 356666666666666544444443 46666666666 3 344411 111244556666666655 444433
Q ss_pred cccccC-CCCccEEEcccccccCCcchhh-cCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEcc
Q 040398 177 FPMLRN-MTGLTRIILRNCNIAGEIPEYI-WGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLS 254 (732)
Q Consensus 177 ~~~l~~-l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs 254 (732)
...+.. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .....+++|+.|+|+
T Consensus 448 ~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~-------------~~~~~l~~L~~L~l~ 514 (594)
T 2p1m_B 448 FEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALL-------------ANASKLETMRSLWMS 514 (594)
T ss_dssp HHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHH-------------HTGGGGGGSSEEEEE
T ss_pred HHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHH-------------HHHHhCCCCCEEeee
Confidence 344433 5666777777766655444444 4566677777776666422111 123345666777777
Q ss_pred CCcC
Q 040398 255 YNNF 258 (732)
Q Consensus 255 ~N~l 258 (732)
+|++
T Consensus 515 ~~~~ 518 (594)
T 2p1m_B 515 SCSV 518 (594)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 7665
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.50 E-value=5.1e-13 Score=145.52 Aligned_cols=226 Identities=12% Similarity=0.044 Sum_probs=174.6
Q ss_pred cCCCCCCCCEEEcccCcCccccCccccccccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCC
Q 040398 12 QIVNLPYLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLE 91 (732)
Q Consensus 12 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 91 (732)
+|.+. +|+.++|..| ++..-..+|...+|+.+.|.+ .++..-+..|.++++|+.++|++|+++ .++.....+++|+
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~ 206 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFNSTVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIE 206 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTTCCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCS
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCCCCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccC
Confidence 56664 7999998876 775666778777899999986 777555678999999999999999998 5665444478999
Q ss_pred EEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcC
Q 040398 92 TLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 92 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 171 (732)
.+.|.+| ++..-...|.++++|+.+.+.+| ++..-...|.+ .+|+.+.| .|.++..-...|.++++|+.+++.+|.
T Consensus 207 ~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~ 282 (401)
T 4fdw_A 207 EVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGST 282 (401)
T ss_dssp EEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSC
T ss_pred EEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCcc
Confidence 9999854 66555678889999999999875 56566677777 78999999 555665667889999999999998887
Q ss_pred CC-----CCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccC
Q 040398 172 GP-----NQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVY 246 (732)
Q Consensus 172 l~-----~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~ 246 (732)
+. .+....|.++++|+.++|. |.++......|.++.+|+.|+|..| ++..-+.. |.++
T Consensus 283 ~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~a--------------F~~~- 345 (401)
T 4fdw_A 283 FNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSA--------------FNNT- 345 (401)
T ss_dssp CCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTS--------------SSSS-
T ss_pred ccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHh--------------CCCC-
Confidence 66 5677789999999999998 4577555668888999999999665 55322222 5667
Q ss_pred CCCeEEccCCcCcCCC
Q 040398 247 EHQSLDLSYNNFTWQS 262 (732)
Q Consensus 247 ~L~~LdLs~N~l~~~~ 262 (732)
+|+.|++++|.+....
T Consensus 346 ~L~~l~l~~n~~~~l~ 361 (401)
T 4fdw_A 346 GIKEVKVEGTTPPQVF 361 (401)
T ss_dssp CCCEEEECCSSCCBCC
T ss_pred CCCEEEEcCCCCcccc
Confidence 8999999999765433
No 392
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.46 E-value=1.2e-14 Score=167.23 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=54.6
Q ss_pred ccceEecccccccccCCcccc-CCCCCCEEecccc-cCCcc-CCccccCCCCCCEEeCCCCcccccCCcccc----CCCC
Q 040398 41 QLKYISVFANRLSGNIPSHLG-NITSLTYLDLEEN-QFSGT-IPRELGNLVNLETLRLSSNRLIGNLPMELV----KLKN 113 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~N-~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~----~l~~ 113 (732)
+|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~ 185 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTS 185 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCc
Confidence 455555555555544444443 3555555555555 33311 222333455555555555555433222222 3445
Q ss_pred CCEEEccCcc--ccc-cCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeee
Q 040398 114 LTDFRINDNN--FNG-SAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLR 166 (732)
Q Consensus 114 L~~L~L~~N~--l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 166 (732)
|+.|++++|. +.. .++..+..+++|+.|+|++|...+.++..+..+++|+.|+
T Consensus 186 L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 241 (594)
T 2p1m_B 186 LVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELG 241 (594)
T ss_dssp CCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEE
T ss_pred CcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcc
Confidence 5555555554 110 0111123345555555555521112333344444444444
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=2.7e-13 Score=129.50 Aligned_cols=106 Identities=21% Similarity=0.265 Sum_probs=65.0
Q ss_pred ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcc
Q 040398 41 QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIN 120 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 120 (732)
..++|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 3456666666666 4555442 566666666666665555566666666666666666664444445666666666666
Q ss_pred CccccccCCccccCCCCCCEEEcccCCCc
Q 040398 121 DNNFNGSAPDFIQSWTQLNRLEIQGSGLE 149 (732)
Q Consensus 121 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 149 (732)
+|+|++..+..|..+++|+.|+|++|.++
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 66666555555666666666666666655
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=4e-13 Score=128.28 Aligned_cols=107 Identities=21% Similarity=0.263 Sum_probs=59.9
Q ss_pred CCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEccc
Q 040398 66 LTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQG 145 (732)
Q Consensus 66 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 145 (732)
.++|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 455666666665 4555443 5556666666666544455555555555555555555544444445555555555555
Q ss_pred CCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCC
Q 040398 146 SGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGE 199 (732)
Q Consensus 146 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ 199 (732)
|+| +.++...|..+++|++|+|++|.+...
T Consensus 88 N~l------------------------~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQL------------------------KSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCC------------------------CCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred Ccc------------------------CEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 554 444444555566666777777777643
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=4.4e-13 Score=128.51 Aligned_cols=105 Identities=24% Similarity=0.320 Sum_probs=60.0
Q ss_pred cceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccC
Q 040398 42 LKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIND 121 (732)
Q Consensus 42 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 121 (732)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 345666666665 5555443 5666666666666655555566666666666666666643333345566666666666
Q ss_pred ccccccCCccccCCCCCCEEEcccCCCc
Q 040398 122 NNFNGSAPDFIQSWTQLNRLEIQGSGLE 149 (732)
Q Consensus 122 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 149 (732)
|+|++..+..|..+++|+.|+|++|.+.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 6665444444555555555555555554
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=7.5e-13 Score=126.89 Aligned_cols=104 Identities=21% Similarity=0.310 Sum_probs=58.2
Q ss_pred CEEecccccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccC
Q 040398 67 TYLDLEENQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGS 146 (732)
Q Consensus 67 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 146 (732)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45666666665 5555443 55666666666665544555555555555555555555443344444555555555555
Q ss_pred CCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEccccccc
Q 040398 147 GLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIA 197 (732)
Q Consensus 147 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 197 (732)
+| ..++...|..+++|++|+|++|.+.
T Consensus 92 ~l------------------------~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HL------------------------KSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CC------------------------CCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cc------------------------ceeCHHHhccccCCCEEEeCCCCcc
Confidence 44 4444444555666666777777776
No 397
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.40 E-value=3.7e-12 Score=138.71 Aligned_cols=224 Identities=11% Similarity=0.074 Sum_probs=176.4
Q ss_pred ccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCC
Q 040398 11 PQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVN 89 (732)
Q Consensus 11 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 89 (732)
.+|.+ .+|+.+.|.. .++..-+..|..+ +|+.++|.+|+++ .++.......+|+.+.|.+| ++..-...|.++++
T Consensus 152 ~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~ 227 (401)
T 4fdw_A 152 MAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQ 227 (401)
T ss_dssp TTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTT
T ss_pred HhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCC
Confidence 35666 4799999986 7776777889887 7999999999999 56654444799999999955 76455568999999
Q ss_pred CCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCc-----CcCCccccCccCCCe
Q 040398 90 LETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLE-----GPIPPSISALDKLNQ 164 (732)
Q Consensus 90 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~ 164 (732)
|+.++|..| ++..-...|.+ .+|+.+.| .|.++......|.++++|+.+.+.+|.+. ...+..|..+++|+.
T Consensus 228 L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~ 304 (401)
T 4fdw_A 228 LKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLAR 304 (401)
T ss_dssp CCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCE
T ss_pred CCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCe
Confidence 999999975 55344556666 89999999 45677677889999999999999998875 355678999999999
Q ss_pred eeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhc
Q 040398 165 LRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRG 244 (732)
Q Consensus 165 L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~ 244 (732)
++|. +.+..+....|.++++|+.|+|..| ++..-...|.++ +|+.|++++|.+....+.. +.+
T Consensus 305 l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~--------------F~~ 367 (401)
T 4fdw_A 305 FEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKV--------------WYG 367 (401)
T ss_dssp ECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSS--------------CCC
T ss_pred EEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccccc--------------ccC
Confidence 9999 5588888999999999999999665 664556788889 9999999999887433322 233
Q ss_pred c-CCCCeEEccCCcC
Q 040398 245 V-YEHQSLDLSYNNF 258 (732)
Q Consensus 245 l-~~L~~LdLs~N~l 258 (732)
+ .+++.|.+..|.+
T Consensus 368 ~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 368 FPDDITVIRVPAESV 382 (401)
T ss_dssp SCTTCCEEEECGGGH
T ss_pred CCCCccEEEeCHHHH
Confidence 3 2566777665543
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=3e-14 Score=153.75 Aligned_cols=182 Identities=15% Similarity=0.157 Sum_probs=116.2
Q ss_pred ccceEecccccccccCCccc----c-CCCCCCEEecccccCCccCCccc-cCCCCCCEEeCCCCcccccCCccc-----c
Q 040398 41 QLKYISVFANRLSGNIPSHL----G-NITSLTYLDLEENQFSGTIPREL-GNLVNLETLRLSSNRLIGNLPMEL-----V 109 (732)
Q Consensus 41 ~L~~L~L~~n~l~~~~p~~l----~-~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~l-----~ 109 (732)
+|++|+|++|.++......+ . ..++|++|+|++|.|+......+ ..+++|+.|+|++|+|+......+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 57777777777764333222 2 22678888888887764322222 234577888888888764333333 2
Q ss_pred CCCCCCEEEccCccccc----cCCccccCCCCCCEEEcccCCCcCc----CCccccCccCCCeeeccCcCCCCCCccc--
Q 040398 110 KLKNLTDFRINDNNFNG----SAPDFIQSWTQLNRLEIQGSGLEGP----IPPSISALDKLNQLRISDLQGPNQTFPM-- 179 (732)
Q Consensus 110 ~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~~~~-- 179 (732)
..++|+.|+|++|.|+. .++..+..+++|++|+|++|.++.. ++..+...++|+.|+|++|.++......
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 35778888888888753 2344456777888888888887642 2455667778888888888887654333
Q ss_pred --ccCCCCccEEEcccccccCCcchhhcCCC--C---CcEEe--CCCCcCcc
Q 040398 180 --LRNMTGLTRIILRNCNIAGEIPEYIWGIK--N---LRFLD--LSFNQLTG 222 (732)
Q Consensus 180 --l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~--~---L~~L~--Ls~N~l~g 222 (732)
+...++|++|+|++|.|++.....+..+. . |+.+. +..|.++.
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~~ 284 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVSE 284 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CHH
T ss_pred HHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccCH
Confidence 44568899999999999876666555432 2 77777 77777763
No 399
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.31 E-value=6.9e-12 Score=128.44 Aligned_cols=148 Identities=12% Similarity=0.081 Sum_probs=115.6
Q ss_pred HHHHhCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCC-CCceeeeeeeEEeCCEEEE
Q 040398 509 IRAATSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ-HPNLVKLYGCCIEGDQLML 587 (732)
Q Consensus 509 ~~~~~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~l 587 (732)
+....+.|++...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. |..+.++++++.+.+..++
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 4455678888888998999999999755 6889999986532233346888999998884 6677889999999999999
Q ss_pred EEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC----------------------------------
Q 040398 588 VYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE---------------------------------- 633 (732)
Q Consensus 588 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~---------------------------------- 633 (732)
||||++|.+|.+.+.. ......++.+++++|+.||+.
T Consensus 88 v~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW 158 (263)
T ss_dssp EEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred EEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence 9999999999876411 112347888999999999981
Q ss_pred ----------------------CCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 634 ----------------------SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 634 ----------------------~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
.+..++|+|++|.||+++++..+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 013489999999999998765567999998764
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=6.3e-14 Score=151.23 Aligned_cols=111 Identities=14% Similarity=0.132 Sum_probs=63.9
Q ss_pred CCCCCEEecccccCCccCCccc----c-CCCCCCEEeCCCCcccccCCccc-cCCCCCCEEEccCccccccCCccc----
Q 040398 63 ITSLTYLDLEENQFSGTIPREL----G-NLVNLETLRLSSNRLIGNLPMEL-VKLKNLTDFRINDNNFNGSAPDFI---- 132 (732)
Q Consensus 63 l~~L~~L~Ls~N~l~~~~p~~l----~-~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~---- 132 (732)
+++|++|+|++|.|+......+ . +.++|+.|+|++|.|+......+ ..+++|+.|+|++|.|+......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3578888888888874333332 2 23678888888888764322222 235677788888887764433333
Q ss_pred -cCCCCCCEEEcccCCCcCc----CCccccCccCCCeeeccCcCCC
Q 040398 133 -QSWTQLNRLEIQGSGLEGP----IPPSISALDKLNQLRISDLQGP 173 (732)
Q Consensus 133 -~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~ 173 (732)
...++|+.|+|++|.++.. ++..+..+++|++|+|++|.+.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 2356677777777776531 2223344444555554444443
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=1e-11 Score=132.76 Aligned_cols=104 Identities=19% Similarity=0.209 Sum_probs=70.2
Q ss_pred ceEecccc-cccccCCccccCCCCCCEEeccc-ccCCccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEcc
Q 040398 43 KYISVFAN-RLSGNIPSHLGNITSLTYLDLEE-NQFSGTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRIN 120 (732)
Q Consensus 43 ~~L~L~~n-~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 120 (732)
..++++++ +|+ .+|. |..+++|++|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 34566666 666 5666 77777777777775 77775555667777777777777777776666667777777777777
Q ss_pred CccccccCCccccCCCCCCEEEcccCCCc
Q 040398 121 DNNFNGSAPDFIQSWTQLNRLEIQGSGLE 149 (732)
Q Consensus 121 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 149 (732)
+|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 7777755555555554 667777666665
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=1.1e-11 Score=132.50 Aligned_cols=102 Identities=22% Similarity=0.214 Sum_probs=66.4
Q ss_pred EEecccc-cCCccCCccccCCCCCCEEeCCC-CcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEccc
Q 040398 68 YLDLEEN-QFSGTIPRELGNLVNLETLRLSS-NRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQG 145 (732)
Q Consensus 68 ~L~Ls~N-~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 145 (732)
.++++++ +|+ .+|. |..+++|+.|+|++ |+|++..+..|.+|++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4577776 676 5676 77777777777775 777755556677777777777777777776666777777777777777
Q ss_pred CCCcCcCCccccCccCCCeeeccCcCC
Q 040398 146 SGLEGPIPPSISALDKLNQLRISDLQG 172 (732)
Q Consensus 146 N~l~~~~p~~~~~l~~L~~L~ls~N~l 172 (732)
|+|++..+..+..++ |+.|+|.+|.+
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCc
Confidence 777644444444333 44444444444
No 403
>2jwp_A Malectin, MGC80075; sugar binding, sugar binding protein; NMR {Xenopus laevis} PDB: 2k46_A* 2kr2_A*
Probab=99.22 E-value=3.3e-11 Score=114.97 Aligned_cols=126 Identities=24% Similarity=0.327 Sum_probs=94.2
Q ss_pred eEEEecCCCeee-ecCceecCCCCCC--CCcceeeecCCCCceeccccCCCCCCccccccccccCCCCCchhhhcccccC
Q 040398 305 SLHINCGGGNVK-VNDSTFEGDAGVG--GGAATYHLLDGTNWGISSTGDFTDDDDEQNTNYIANSQSSGISELYNDARIS 381 (732)
Q Consensus 305 s~~i~c~~~~~~-~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (732)
+..|||||+..+ ..+..|++|.... |++..+ + . . ..+ ....+....+|++||..
T Consensus 7 ~~~INcGg~~~~d~~gr~w~~D~~~~~~g~~~~~--------~--~--~----------~~~-~~~~~~~~~lY~TaR~~ 63 (174)
T 2jwp_A 7 IWAVNAGGESHVDVHGIHYRKDPLEGRVGRASDY--------G--M--K----------LPI-LRSNPEDQVLYQTERYN 63 (174)
T ss_dssp EEEEEETSSSEEETTTEEECSSCSSTTCCCCCCC--------C--T--T----------SCC-SSSCHHHHHTTTCCCCC
T ss_pred EEEEECCCCCccCCCCCEEcCCcCcccCCccccc--------c--c--c----------eEe-cccCCCCchhhhhhccC
Confidence 678999999865 4456899997532 322211 0 0 0 000 11233457799999999
Q ss_pred ccceeEEEEeecCcceeEEEEeeEEEeeccccccccCceeeEEEecceecccccchhhhccCCCCceeeeeeeeeccce
Q 040398 382 PLSLTYIGYCLENGNYSVALHFAEIQFTNDKTYKTLGRRIFDIYIQDKLVEKDFNIEAEAHGVLKPVTRPFTANVSNHI 460 (732)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 460 (732)
|.+++|..-|..+|+|.|.|||+|+.+++ +|+|+|+|++++..+.++|+|.+++++ ..+..+.+...+.+..
T Consensus 64 ~~~~tY~f~v~~~G~Y~VrLhF~ei~~~~------~~~rvFdV~ing~~~l~~fdi~~~ag~-~~~~~~~~~~~v~~~~ 135 (174)
T 2jwp_A 64 EDSFGYDIPIKEEGEYVLVLKFAEVYFAQ------SQQKVFDVRVNGHTVVKDLDIFDRVGH-STAHDEIIPISIKKGK 135 (174)
T ss_dssp CSCEEEEEECCSCEEEEEEEEEECCSCCC------SSSSCEEEEETTEEEEEEECHHHHHSS-SSCEEEEEEEEEETTE
T ss_pred CCCeEEEEEeCCCeEEEEEEEEeccccCC------CCCeEeEEEECCEEeecCcCHHHhhCC-CeeEEEEEEEEEecCc
Confidence 99999999999999999999999998753 799999999999999999999999876 5677777766654443
No 404
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12 E-value=3.8e-11 Score=122.39 Aligned_cols=140 Identities=15% Similarity=0.123 Sum_probs=101.8
Q ss_pred hCCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCce--eeeeeeEEeCCEEEEEEE
Q 040398 513 TSNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNL--VKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 513 ~~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nI--v~l~~~~~~~~~~~lv~e 590 (732)
...+.+....+.|..+.||++...+|+.+++|+.... ....+.+|+++++.+.+.++ .+++++...++..++|||
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 3445443333456669999998777888999997643 22456788998888865454 468888888788999999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCC------------------------------------
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEES------------------------------------ 634 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~------------------------------------ 634 (732)
|++|.++. ... .. ...++.++++.|..||+..
T Consensus 96 ~i~G~~l~--~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 96 EVPGQDLL--SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp CCSSEETT--TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred ecCCcccC--cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 99998884 210 11 2356778888888888642
Q ss_pred -------------------CCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 635 -------------------RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 635 -------------------~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
+..++|+|++|.||+++++..+.|+|||.+...
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 112899999999999987766779999987653
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.95 E-value=4.4e-10 Score=120.20 Aligned_cols=68 Identities=16% Similarity=0.234 Sum_probs=40.9
Q ss_pred CCCCccEEEcccccccCCcchhhc---CCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcC
Q 040398 182 NMTGLTRIILRNCNIAGEIPEYIW---GIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNF 258 (732)
Q Consensus 182 ~l~~L~~L~Ls~N~l~~~~p~~l~---~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l 258 (732)
.+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.|++.-+. .+...+..+++|+.|+|++|.+
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~----------~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR----------LLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH----------HHHTTHHHHTTCSEEECCSBBC
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH----------HHHhhcccCCcceEEECCCCcC
Confidence 356777777777777654444333 366777777777777643111 1122234567777777777766
Q ss_pred c
Q 040398 259 T 259 (732)
Q Consensus 259 ~ 259 (732)
+
T Consensus 320 ~ 320 (362)
T 2ra8_A 320 S 320 (362)
T ss_dssp C
T ss_pred C
Confidence 4
No 406
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.94 E-value=3.1e-10 Score=118.83 Aligned_cols=187 Identities=18% Similarity=0.210 Sum_probs=122.4
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCC-CCce--eeeeeeEEeCC---EEEEEEEec
Q 040398 519 MNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ-HPNL--VKLYGCCIEGD---QLMLVYEYL 592 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nI--v~l~~~~~~~~---~~~lv~e~~ 592 (732)
++.++.|....||++. ..+++|+.... .....+.+|.++++.+. +..+ .+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4668999999999864 45888885432 33567889999998873 4333 34444333332 347899999
Q ss_pred CCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC---------------------------------------
Q 040398 593 ENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE--------------------------------------- 633 (732)
Q Consensus 593 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~--------------------------------------- 633 (732)
+|.++.+... ..++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 99 KGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9988875431 2466777888888999888888862
Q ss_pred ----------------CCCceEeCCCCCCCeEEcC--CCCeEEEeeecceeCCccCceeee-------------cccCcc
Q 040398 634 ----------------SRFKIVHRDIKATNVLLDR--DLNPKISDFGLAKLDEEEKTHIST-------------RVAGTI 682 (732)
Q Consensus 634 ----------------~~~~iiH~Dlkp~NILl~~--~~~~kL~DfGla~~~~~~~~~~~~-------------~~~gt~ 682 (732)
.+..++|+|++|.||++++ ...+.|+||+.+...++...-... .+....
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1134799999999999998 455789999988754332110000 000001
Q ss_pred cccc-chhcccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 683 GYMA-PEYALWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 683 ~y~A-PE~~~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
++.. |+.... .....+.|+++.+++.+.+|+.+|-
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1111 222211 1123689999999999999998763
No 407
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.93 E-value=1.4e-09 Score=116.58 Aligned_cols=144 Identities=16% Similarity=0.238 Sum_probs=106.6
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEcc--ccc-ccchHHHHHHHHHHhcCCC--CceeeeeeeEEeC---CEEEEEE
Q 040398 518 PMNKIGEGGFGPVYKGQLTDGTIIAVKLLS--SKS-RQGNREFLNEIGTISCLQH--PNLVKLYGCCIEG---DQLMLVY 589 (732)
Q Consensus 518 ~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~--~~~-~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~---~~~~lv~ 589 (732)
.++.++.|.++.||+++..+ ..+++|+.. ... ......+.+|.++++.+.+ ..+++++.++.+. +..++||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 46779999999999998764 578888765 321 1223567889999988874 4567888888766 4578999
Q ss_pred EecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 040398 590 EYLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEES----------------------------------- 634 (732)
Q Consensus 590 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~----------------------------------- 634 (732)
||++|..+.+.. ...++...+..++.+++++|..||+..
T Consensus 121 e~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (359)
T 3dxp_A 121 EFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI 194 (359)
T ss_dssp ECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred EecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence 999998775422 124678888899999999999999731
Q ss_pred --------------------CCceEeCCCCCCCeEEcCCCC--eEEEeeecceeCC
Q 040398 635 --------------------RFKIVHRDIKATNVLLDRDLN--PKISDFGLAKLDE 668 (732)
Q Consensus 635 --------------------~~~iiH~Dlkp~NILl~~~~~--~kL~DfGla~~~~ 668 (732)
+..++|+|+++.||++++++. +.|+||+.+...+
T Consensus 195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~ 250 (359)
T 3dxp_A 195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH 250 (359)
T ss_dssp HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence 246899999999999998753 6899999887543
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=4.3e-10 Score=120.29 Aligned_cols=179 Identities=17% Similarity=0.213 Sum_probs=106.7
Q ss_pred ccCCCCCCEEecccccCC---------ccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCc
Q 040398 60 LGNITSLTYLDLEENQFS---------GTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPD 130 (732)
Q Consensus 60 l~~l~~L~~L~Ls~N~l~---------~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 130 (732)
+..+++|+.|.+..+... +.+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.+......
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHH
Confidence 445566777766554321 123344556677777777776311 2232 3 267777887777776543333
Q ss_pred ccc--CCCCCCEEEccc--CCCcCc-----CCccc--cCccCCCeeeccCcCCCCCCcccc---cCCCCccEEEcccccc
Q 040398 131 FIQ--SWTQLNRLEIQG--SGLEGP-----IPPSI--SALDKLNQLRISDLQGPNQTFPML---RNMTGLTRIILRNCNI 196 (732)
Q Consensus 131 ~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~ls~N~l~~~~~~~l---~~l~~L~~L~Ls~N~l 196 (732)
.+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|++|.+.+.....+ ..+++|+.|+|+.|.|
T Consensus 212 ~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L 291 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVL 291 (362)
T ss_dssp HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCC
T ss_pred HHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCC
Confidence 343 577788777753 221111 11122 246788888888887764322222 2578899999999999
Q ss_pred cCCc----chhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhc-cCCCCeEEccCCc
Q 040398 197 AGEI----PEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRG-VYEHQSLDLSYNN 257 (732)
Q Consensus 197 ~~~~----p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~-l~~L~~LdLs~N~ 257 (732)
++.. +..+..+++|+.|+|++|.|+...- ..+.. + ...+|++.|+
T Consensus 292 ~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~--------------~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 292 TDEGARLLLDHVDKIKHLKFINMKYNYLSDEMK--------------KELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp BHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHH--------------HHHHHHC--CSEEECCSBC
T ss_pred ChHHHHHHHhhcccCCcceEEECCCCcCCHHHH--------------HHHHHHc--CCEEEecCCc
Confidence 8643 3444567899999999998873311 11222 2 4568999988
No 409
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.76 E-value=1.1e-07 Score=103.38 Aligned_cols=195 Identities=11% Similarity=0.076 Sum_probs=86.2
Q ss_pred CCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCCCC
Q 040398 13 IVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLE 91 (732)
Q Consensus 13 l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 91 (732)
|.++++|+.+.|..+- .......|... +|+.+.+..| ++..-...+.++..|+.+.+..+... +........+|+
T Consensus 158 F~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~ 233 (394)
T 4fs7_A 158 FATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVK 233 (394)
T ss_dssp TTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCC
T ss_pred hcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCc
Confidence 4444444444444322 11222333333 3444444333 22122334444444444444433221 222223334444
Q ss_pred EEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcC
Q 040398 92 TLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQ 171 (732)
Q Consensus 92 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 171 (732)
.+.+..+ ++..-...+..+.+|+.+.+..+... .....|..+..|+.+.+..+.+. ...+..+.+|+.+.+.++
T Consensus 234 ~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~- 307 (394)
T 4fs7_A 234 NIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS- 307 (394)
T ss_dssp EEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-
T ss_pred eEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-
Confidence 4444322 11122233444555555555544322 33444555555555554443321 234555556666665543
Q ss_pred CCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCC
Q 040398 172 GPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFN 218 (732)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 218 (732)
+..+....|.++.+|+.++|.++ ++..-...|.++.+|+.+++..|
T Consensus 308 i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 308 VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 44455555666666666666533 44233345555666666666544
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.69 E-value=3.9e-07 Score=98.89 Aligned_cols=84 Identities=13% Similarity=0.127 Sum_probs=38.4
Q ss_pred cCCCCCCCCEEEcccCc---CccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCC
Q 040398 12 QIVNLPYLETVDFAYNY---LHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNL 87 (732)
Q Consensus 12 ~l~~l~~L~~L~Ls~N~---l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l 87 (732)
+|.++++|+.+.+..|. ++..-..+|... +|+.+.+..+ ++..-...+..+.+|+.+.+..+. ...-...+.++
T Consensus 82 AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c 159 (394)
T 4gt6_A 82 AFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEGV-TSVADGMFSYC 159 (394)
T ss_dssp TTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTC
T ss_pred HhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccccccee-eeecccceecc
Confidence 34555555555555442 332333344433 4554444332 332223445555566666665432 21223345555
Q ss_pred CCCCEEeCCC
Q 040398 88 VNLETLRLSS 97 (732)
Q Consensus 88 ~~L~~L~L~~ 97 (732)
.+|+.+.+..
T Consensus 160 ~~L~~i~~~~ 169 (394)
T 4gt6_A 160 YSLHTVTLPD 169 (394)
T ss_dssp TTCCEEECCT
T ss_pred cccccccccc
Confidence 5555555543
No 411
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.55 E-value=3.8e-07 Score=98.93 Aligned_cols=197 Identities=12% Similarity=0.039 Sum_probs=150.2
Q ss_pred ccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCC
Q 040398 11 PQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVN 89 (732)
Q Consensus 11 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 89 (732)
.++.++++|+.+++..| ++......|... .|+.+.+..+... +........+|+.+.+..+. +..-...+.++..
T Consensus 179 ~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~ 254 (394)
T 4fs7_A 179 GLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTD 254 (394)
T ss_dssp TTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSS
T ss_pred ccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-eeccccccccccc
Confidence 35778899999999876 554555667766 6888888766544 44455566889999987643 3234457888999
Q ss_pred CCEEeCCCCcccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccC
Q 040398 90 LETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISD 169 (732)
Q Consensus 90 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 169 (732)
|+.+.+..+..+ .....+..+..|+.+.+..+.+ ....|..+.+|+.+.+.++ ++..-..+|.++++|+.++|.+
T Consensus 255 l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~ 329 (394)
T 4fs7_A 255 LESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPY 329 (394)
T ss_dssp CCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCT
T ss_pred ceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCC
Confidence 999999887654 5566788899999998877653 2456888999999999765 6545567799999999999975
Q ss_pred cCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeCCCC
Q 040398 170 LQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFN 218 (732)
Q Consensus 170 N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 218 (732)
+ ++.+....|.++.+|+.+.|..| ++..-...|.++++|+.+++..|
T Consensus 330 ~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 330 L-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred c-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 4 77788888999999999999877 66455567888999999988654
No 412
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.53 E-value=1.6e-06 Score=94.06 Aligned_cols=240 Identities=10% Similarity=0.090 Sum_probs=144.2
Q ss_pred ccCCCCCCCCEEEcccCcCccccCcccccc-ccceEecccccccccCCccccCCCCCCEEecccccCCccCCccccCCCC
Q 040398 11 PQIVNLPYLETVDFAYNYLHGSIPREWASM-QLKYISVFANRLSGNIPSHLGNITSLTYLDLEENQFSGTIPRELGNLVN 89 (732)
Q Consensus 11 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 89 (732)
.+|..+..|+.+.+..+ ++......|... +|+.+.+..+ +...-...+..+.+|+.+.+..+ +. .+........+
T Consensus 108 ~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF~~~~ 183 (394)
T 4gt6_A 108 QAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VT-AIEERAFTGTA 183 (394)
T ss_dssp TTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCC
T ss_pred hhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-ee-Eeccccccccc
Confidence 35667777877777654 443444556555 6888887643 33244556777777888777654 33 23332223355
Q ss_pred CCEEeCCCCcccccCCccccCCCCCCEEEccCcc------------------------------------ccccCCcccc
Q 040398 90 LETLRLSSNRLIGNLPMELVKLKNLTDFRINDNN------------------------------------FNGSAPDFIQ 133 (732)
Q Consensus 90 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~------------------------------------l~~~~p~~~~ 133 (732)
|+.+.+..+-.. .-...+..+.+|+......+. ++..-...|.
T Consensus 184 l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~ 262 (394)
T 4gt6_A 184 LTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFD 262 (394)
T ss_dssp CSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTT
T ss_pred eeEEEECCcccc-cccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceee
Confidence 666666544322 233344444444444332221 1112234577
Q ss_pred CCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEE
Q 040398 134 SWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFL 213 (732)
Q Consensus 134 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L 213 (732)
++..|+.+.+.++..+ .....|.++++|+.+.+. +.+..+....|.++.+|+.++|..+ ++..-...|.++.+|+.+
T Consensus 263 ~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i 339 (394)
T 4gt6_A 263 SCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERI 339 (394)
T ss_dssp TCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred ecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEE
Confidence 7888888888766543 556678888888888885 4566677778888888888888765 553445577788888888
Q ss_pred eCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCCCccccCCCCcc
Q 040398 214 DLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQPACREKPNLN 275 (732)
Q Consensus 214 ~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~~~~~~~~~l~ 275 (732)
.|..+ ++ .|.+ ..|.++.+|+.+++++|.... .....|..+..+.
T Consensus 340 ~ip~s-v~-~I~~-------------~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~ 384 (394)
T 4gt6_A 340 AIPSS-VT-KIPE-------------SAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLP 384 (394)
T ss_dssp EECTT-CC-BCCG-------------GGGTTCTTCCEEEESSCHHHH--HTCBCCCCC----
T ss_pred EECcc-cC-EEhH-------------hHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEE
Confidence 88654 44 2332 126777888888888886543 2234555555543
No 413
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.53 E-value=2.9e-07 Score=96.90 Aligned_cols=184 Identities=14% Similarity=0.157 Sum_probs=119.6
Q ss_pred CCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCC--C--ceeeeeeeEEeCCEEEEEEE
Q 040398 515 NFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQH--P--NLVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 515 ~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H--~--nIv~l~~~~~~~~~~~lv~e 590 (732)
.....+.++.|....||++ |+.+++|+.... .....+.+|.++++.+.+ . .+.++++. +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5556778999999999998 567888876432 223568889988888865 1 23344444 45689999
Q ss_pred ecCCCchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCC-----------------------------------
Q 040398 591 YLENNSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESR----------------------------------- 635 (732)
Q Consensus 591 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~----------------------------------- 635 (732)
|++|.++.+... ..++...+..++.++++.+..||+...
T Consensus 108 ~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (320)
T 3r70_A 108 YIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLL 181 (320)
T ss_dssp CCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred ecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccc
Confidence 999988864331 235666777888888888888885421
Q ss_pred -------------------------CceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhc
Q 040398 636 -------------------------FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYA 690 (732)
Q Consensus 636 -------------------------~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~ 690 (732)
..++|+|++|.||+++++..+.|+||+.+...++...-... .........||..
T Consensus 182 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~ 260 (320)
T 3r70_A 182 TDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGDPDNDFLCL-LDCSTDDFGKEFG 260 (320)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEECGGGGGHHH-HSCCTTSCCHHHH
T ss_pred cccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCCHHHHHHHH-HHhcccccCHHHH
Confidence 23599999999999999666799999998764442221110 1111112233332
Q ss_pred c---cCC-------CCCchhHHHHHHHHHHHHcCC
Q 040398 691 L---WGY-------LTYKADVYSFGVVALEIVSGK 715 (732)
Q Consensus 691 ~---~~~-------~~~k~DvwSlGvll~elltG~ 715 (732)
. ..+ .....+.|..-..+.+++.|-
T Consensus 261 ~~~l~~Y~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 295 (320)
T 3r70_A 261 RKVLKYYQHKAPEVAERKAELNDVYWSIDQIIYGY 295 (320)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHTHHHHHHHSSC
T ss_pred HHHHHHHhccCcHHHHHHHHHHHHHhHHHHHHHHH
Confidence 1 111 123567786666678888874
No 414
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.48 E-value=5.7e-07 Score=93.03 Aligned_cols=146 Identities=18% Similarity=0.180 Sum_probs=95.5
Q ss_pred CcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCC---ceeeeeeeEEeCCEEEEEEEec
Q 040398 516 FDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHP---NLVKLYGCCIEGDQLMLVYEYL 592 (732)
Q Consensus 516 f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lv~e~~ 592 (732)
....+.++.|.++.||+++..+|+.++||+...........|.+|++.++.+++. .+++++++. ..++||||+
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ccceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 3446789999999999999888999999997544333456789999999999875 466777653 358999999
Q ss_pred CCCchhH-----------HhhcCCCCc-----------------ccCCHHHHHH--------------------HHHHHH
Q 040398 593 ENNSLAH-----------ALFGGENSQ-----------------LKLNWSVRQK--------------------ICLGIA 624 (732)
Q Consensus 593 ~~gsL~~-----------~l~~~~~~~-----------------~~l~~~~~~~--------------------i~~~i~ 624 (732)
+++++.. .+|...... ..-+|..... ....+-
T Consensus 93 ~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~ 172 (288)
T 3d1u_A 93 DERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVE 172 (288)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9986421 123321110 0013332210 011112
Q ss_pred HHHHHHH----hCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 625 RGLAFLH----EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 625 ~aL~yLH----~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
+.++.+. ...+..++|+|+.+.||+++.+ .+.|+|| .+..-
T Consensus 173 ~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~~g 217 (288)
T 3d1u_A 173 KVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAHGG 217 (288)
T ss_dssp HHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCEEE
T ss_pred HHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcCCC
Confidence 2233332 2234569999999999999984 5889999 76543
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=2.6e-08 Score=96.05 Aligned_cols=92 Identities=21% Similarity=0.187 Sum_probs=46.0
Q ss_pred ccccCCCCCCEEecccc-cCCcc----CCccccCCCCCCEEeCCCCcccc----cCCccccCCCCCCEEEccCcccccc-
Q 040398 58 SHLGNITSLTYLDLEEN-QFSGT----IPRELGNLVNLETLRLSSNRLIG----NLPMELVKLKNLTDFRINDNNFNGS- 127 (732)
Q Consensus 58 ~~l~~l~~L~~L~Ls~N-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~- 127 (732)
..+...++|++|+|++| .|... +...+...++|++|+|++|+|.. .+...+...++|+.|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34445566666666666 55521 23344455566666666666653 1223334445566666666655422
Q ss_pred ---CCccccCCCCCCEEEc--ccCCCc
Q 040398 128 ---APDFIQSWTQLNRLEI--QGSGLE 149 (732)
Q Consensus 128 ---~p~~~~~l~~L~~L~L--s~N~l~ 149 (732)
+...+...++|+.|+| ++|.++
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2233444444555555 444443
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=5e-08 Score=94.02 Aligned_cols=124 Identities=14% Similarity=0.164 Sum_probs=69.7
Q ss_pred ccccCCCCCCEEEccCc-ccccc----CCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccc
Q 040398 106 MELVKLKNLTDFRINDN-NFNGS----APDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPML 180 (732)
Q Consensus 106 ~~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l 180 (732)
..+...++|+.|+|++| .|... +...+...++|++|+|++|.+.......+ ...+
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l--------------------~~~L 89 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFAL--------------------AEML 89 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHH--------------------HHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHH--------------------HHHH
Confidence 34455666777777776 66422 22334445566666666666542111111 1123
Q ss_pred cCCCCccEEEcccccccCC----cchhhcCCCCCcEEeC--CCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEcc
Q 040398 181 RNMTGLTRIILRNCNIAGE----IPEYIWGIKNLRFLDL--SFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLS 254 (732)
Q Consensus 181 ~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L--s~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs 254 (732)
...++|++|+|++|.|++. +...+...++|+.|+| ++|.|+... ...+...+...++|+.|+|+
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g----------~~~l~~~L~~n~~L~~L~L~ 159 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNV----------EMEIANMLEKNTTLLKFGYH 159 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHH----------HHHHHHHHHHCSSCCEEECC
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHH----------HHHHHHHHHhCCCcCEEecc
Confidence 3345667777777777643 3455566677777877 677776321 12334455666778888888
Q ss_pred CCcCc
Q 040398 255 YNNFT 259 (732)
Q Consensus 255 ~N~l~ 259 (732)
+|.+.
T Consensus 160 ~n~i~ 164 (185)
T 1io0_A 160 FTQQG 164 (185)
T ss_dssp CSSHH
T ss_pred CCCCC
Confidence 87764
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=1.3e-08 Score=103.43 Aligned_cols=105 Identities=21% Similarity=0.224 Sum_probs=58.8
Q ss_pred ecccccccccCC-ccccCCCCCCE--EecccccCCccCCc----cccCCCCCCEEeCCCCcccc--cCCccccCCCCCCE
Q 040398 46 SVFANRLSGNIP-SHLGNITSLTY--LDLEENQFSGTIPR----ELGNLVNLETLRLSSNRLIG--NLPMELVKLKNLTD 116 (732)
Q Consensus 46 ~L~~n~l~~~~p-~~l~~l~~L~~--L~Ls~N~l~~~~p~----~l~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~ 116 (732)
..++|..++.+. +.+...+.|.. ++++.|... .++. ...++++|+.|+|++|+|++ .+|..+..+++|+.
T Consensus 122 ~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~ 200 (267)
T 3rw6_A 122 SKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKI 200 (267)
T ss_dssp HHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCE
T ss_pred HhccchhccccCHHHcCCCcchhhcCccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCE
Confidence 333444443333 22444455555 566666433 2222 12356677777777777775 44555666777777
Q ss_pred EEccCccccccCCccccCCC--CCCEEEcccCCCcCcCC
Q 040398 117 FRINDNNFNGSAPDFIQSWT--QLNRLEIQGSGLEGPIP 153 (732)
Q Consensus 117 L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p 153 (732)
|+|++|+|++. ..+..+. +|+.|+|++|.+.+.+|
T Consensus 201 L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 201 LNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp EECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred EECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 77777777644 2233333 67777777777765444
No 418
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.40 E-value=6.6e-06 Score=88.51 Aligned_cols=239 Identities=11% Similarity=0.057 Sum_probs=122.6
Q ss_pred cCCCCCCCCEEEcccCcCccccCccccccccceEecccccccccCC-ccccCCCCCCEEecccccCCccCCccccCCCCC
Q 040398 12 QIVNLPYLETVDFAYNYLHGSIPREWASMQLKYISVFANRLSGNIP-SHLGNITSLTYLDLEENQFSGTIPRELGNLVNL 90 (732)
Q Consensus 12 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 90 (732)
+|.++++|+.++|..+ ++..-..+|...+|+.+.+..+ ++ .+. ..|.. .+|+.+++..+-.. .-...|.++ +|
T Consensus 64 aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c~l~~i~~~~~-l~-~I~~~aF~~-~~L~~i~lp~~~~~-i~~~~F~~~-~l 137 (379)
T 4h09_A 64 NFNSCYNMTKVTVAST-VTSIGDGAFADTKLQSYTGMER-VK-KFGDYVFQG-TDLDDFEFPGATTE-IGNYIFYNS-SV 137 (379)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCCCCEEEECTT-CC-EECTTTTTT-CCCSEEECCTTCCE-ECTTTTTTC-CC
T ss_pred HhhCCCCCCEEEeCCc-ceEechhhhcCCCCceEECCce-ee-Eeccceecc-CCcccccCCCcccc-ccccccccc-ee
Confidence 5677777777777643 5544455666666666666533 44 233 33333 46777777654221 111222222 34
Q ss_pred CEEeCCCCcccccCCccccCCCCCCEEEccCccc-----------------------------------cccCCccccCC
Q 040398 91 ETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNF-----------------------------------NGSAPDFIQSW 135 (732)
Q Consensus 91 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l-----------------------------------~~~~p~~~~~l 135 (732)
+.+.+..+ ++..-...+..+.+|+.+.+..+.. .......+..+
T Consensus 138 ~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~ 216 (379)
T 4h09_A 138 KRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYG 216 (379)
T ss_dssp CEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTC
T ss_pred eeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccc
Confidence 44433322 1112223334444444444332211 01112234445
Q ss_pred CCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCCCccEEEcccccccCCcchhhcCCCCCcEEeC
Q 040398 136 TQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIILRNCNIAGEIPEYIWGIKNLRFLDL 215 (732)
Q Consensus 136 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 215 (732)
.+|+.+.+..+ ++......+..+.+|+.+.+.++ ++.+....|.++.+|+.+.+..+ +.......|..+.+|+.+.+
T Consensus 217 ~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l 293 (379)
T 4h09_A 217 KNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVM 293 (379)
T ss_dssp SSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEE
T ss_pred cccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccc
Confidence 56666666444 23234455666777777777654 55566666777777777777544 44233445666777777777
Q ss_pred CCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCcCCCCCC-ccccCCCCcc
Q 040398 216 SFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFTWQSPEQ-PACREKPNLN 275 (732)
Q Consensus 216 s~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~~~~p~~-~~~~~~~~l~ 275 (732)
.+|.++. |++. .|.++.+|+.++|..| ++...... ..|..+..+.
T Consensus 294 ~~~~i~~-I~~~-------------aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 339 (379)
T 4h09_A 294 DNSAIET-LEPR-------------VFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTIS 339 (379)
T ss_dssp CCTTCCE-ECTT-------------TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCC
T ss_pred cccccce-ehhh-------------hhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEE
Confidence 7766662 2221 1556667777777544 44333332 3455555554
No 419
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.40 E-value=3.4e-08 Score=100.34 Aligned_cols=64 Identities=23% Similarity=0.149 Sum_probs=35.9
Q ss_pred ccCCCCccEEEcccccccCCcchhhcCCC--CCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEE
Q 040398 180 LRNMTGLTRIILRNCNIAGEIPEYIWGIK--NLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLD 252 (732)
Q Consensus 180 l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~Ld 252 (732)
+..+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+++.+|+. -......+..+++|+.||
T Consensus 192 ~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~-------~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 192 VQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQ-------STYISAIRERFPKLLRLD 257 (267)
T ss_dssp HHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSH-------HHHHHHHHHHCTTCCEES
T ss_pred HhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcc-------hhHHHHHHHHCcccCeEC
Confidence 34455666666666666543 2233333 6777777777777665531 012224466667777776
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.36 E-value=2e-06 Score=89.79 Aligned_cols=139 Identities=18% Similarity=0.185 Sum_probs=95.8
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCC---ceeeeeeeEE-eCCEEEEEEEecCC
Q 040398 519 MNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHP---NLVKLYGCCI-EGDQLMLVYEYLEN 594 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~-~~~~~~lv~e~~~~ 594 (732)
.+.++.|....||+. |..+++|+.. .......+.+|.++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888888899988 5668888843 223356788999999998753 2456666664 34567899999999
Q ss_pred CchhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhC-----------------------------------------
Q 040398 595 NSLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEE----------------------------------------- 633 (732)
Q Consensus 595 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~----------------------------------------- 633 (732)
.++.+... ..++......++.++++.|..||+.
T Consensus 98 ~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 88876321 1234445555555566655555543
Q ss_pred ----------------CCCceEeCCCCCCCeEEcC---CCC-eEEEeeecceeCCc
Q 040398 634 ----------------SRFKIVHRDIKATNVLLDR---DLN-PKISDFGLAKLDEE 669 (732)
Q Consensus 634 ----------------~~~~iiH~Dlkp~NILl~~---~~~-~kL~DfGla~~~~~ 669 (732)
.+..++|+|+++.||+++. ++. +.|+||+.+...++
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~ 227 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDP 227 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECG
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCH
Confidence 1234699999999999987 455 48999998876544
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.32 E-value=3.1e-06 Score=86.38 Aligned_cols=137 Identities=15% Similarity=0.106 Sum_probs=97.5
Q ss_pred eecccCce-EEEEEEEc-CCeEEEEEEcccccccchHHHHHHHHHHhcCC-CCceeeeeeeEEeCCEEEEEEEecCCCch
Q 040398 521 KIGEGGFG-PVYKGQLT-DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ-HPNLVKLYGCCIEGDQLMLVYEYLENNSL 597 (732)
Q Consensus 521 ~LG~G~fg-~Vy~a~~~-~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 597 (732)
.+..|..+ .||+.... ++..+++|+-... ....+.+|...++.+. +--+.+++.++.+++..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 35556555 69998765 4677899986532 3456778888888774 32356788999999999999999999888
Q ss_pred hHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------------
Q 040398 598 AHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEES------------------------------------------- 634 (732)
Q Consensus 598 ~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~------------------------------------------- 634 (732)
.+..... ......++.++++.|..||...
T Consensus 108 ~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 108 FQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 7754211 1223356666777777777531
Q ss_pred ------------CCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 635 ------------RFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 635 ------------~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
+..++|+|+.+.||++++++.+-|+||+.+...+
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gd 225 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD 225 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCC
Confidence 1237899999999999987767799999886543
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.23 E-value=4.1e-06 Score=89.55 Aligned_cols=149 Identities=12% Similarity=0.152 Sum_probs=93.0
Q ss_pred CCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCc--eeeeeeeEEeC-CEEEEEEEe
Q 040398 515 NFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPN--LVKLYGCCIEG-DQLMLVYEY 591 (732)
Q Consensus 515 ~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~-~~~~lv~e~ 591 (732)
.....+.++.|....+|+.+. +++.+++|+.... ..+.+|..+++.+.... +.+++.++... +..++||||
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~ 115 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRR 115 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEEC
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEe
Confidence 344567789999999999875 5788999987532 25788888888886544 44677776654 568999999
Q ss_pred cCCCchhHH------------------hhcCCCCc-c------------cCCHHHH---------------------HHH
Q 040398 592 LENNSLAHA------------------LFGGENSQ-L------------KLNWSVR---------------------QKI 619 (732)
Q Consensus 592 ~~~gsL~~~------------------l~~~~~~~-~------------~l~~~~~---------------------~~i 619 (732)
++|.++.+. +|...... . .-.|... ...
T Consensus 116 l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~ 195 (362)
T 3ovc_A 116 AQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASV 195 (362)
T ss_dssp CCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHH
T ss_pred cCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 998665421 12111000 0 0011111 011
Q ss_pred HHHHHHHHHHHHhC-CCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 620 CLGIARGLAFLHEE-SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 620 ~~~i~~aL~yLH~~-~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
...+...++++... ....++|+|+.+.||+++++..+.|+||+.+..-++
T Consensus 196 ~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd~ 246 (362)
T 3ovc_A 196 AQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGDS 246 (362)
T ss_dssp HHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEECT
T ss_pred hHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCCH
Confidence 11222223333221 114589999999999998777788999998876443
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.10 E-value=2.9e-06 Score=90.51 Aligned_cols=80 Identities=6% Similarity=0.005 Sum_probs=54.1
Q ss_pred ccee-cccCceEEEEEEEc-------CCeEEEEEEccccc---ccchHHHHHHHHHHhcCC-C--CceeeeeeeEEeC--
Q 040398 519 MNKI-GEGGFGPVYKGQLT-------DGTIIAVKLLSSKS---RQGNREFLNEIGTISCLQ-H--PNLVKLYGCCIEG-- 582 (732)
Q Consensus 519 ~~~L-G~G~fg~Vy~a~~~-------~g~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~-- 582 (732)
.+.| +.|....+|+.... +++.+++|+..... ......+.+|+++++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4567 88888999998754 26788999865432 101245677888887774 2 2456777776554
Q ss_pred -CEEEEEEEecCCCchh
Q 040398 583 -DQLMLVYEYLENNSLA 598 (732)
Q Consensus 583 -~~~~lv~e~~~~gsL~ 598 (732)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3468999999987654
No 424
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.09 E-value=4.6e-05 Score=81.85 Aligned_cols=136 Identities=13% Similarity=0.137 Sum_probs=102.3
Q ss_pred CccccCCCCCCEEEccCccccccCCccccCCCCCCEEEcccCCCcCcCCccccCccCCCeeeccCcCCCCCCcccccCCC
Q 040398 105 PMELVKLKNLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGLEGPIPPSISALDKLNQLRISDLQGPNQTFPMLRNMT 184 (732)
Q Consensus 105 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~ 184 (732)
...+..+.+|+.+.+..+ +.......+.++..|+.+.+..+ ++..-...|.++.+|+.+.+.. .+..+....|..+.
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceecccccccccc
Confidence 445666788888888755 44455667888999999999776 5545567788889999998865 46667777889999
Q ss_pred CccEEEcccccccCCcchhhcCCCCCcEEeCCCCcCcccCCCCCccCcchhhHHHHHHhccCCCCeEEccCCcCc
Q 040398 185 GLTRIILRNCNIAGEIPEYIWGIKNLRFLDLSFNQLTGELPDVAVPADLKFTQILMFIRGVYEHQSLDLSYNNFT 259 (732)
Q Consensus 185 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~~~l~~~~~~~~~~~l~~L~~LdLs~N~l~ 259 (732)
+|+.+.+.++.++..-...|.++.+|+.+.|..+ ++ .|.+. .|.++.+|+.+.|..| ++
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~-------------aF~~C~~L~~i~ip~~-v~ 345 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVY-------------AFKNCKALSTISYPKS-IT 345 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTT-------------TTTTCTTCCCCCCCTT-CC
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHH-------------HhhCCCCCCEEEECCc-cC
Confidence 9999999998888555668888999999999755 44 33332 2677788888888655 55
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.96 E-value=3.6e-05 Score=81.22 Aligned_cols=145 Identities=17% Similarity=0.209 Sum_probs=81.1
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCC--Cceeeeee------eEEeCCEEEEEEE
Q 040398 519 MNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQH--PNLVKLYG------CCIEGDQLMLVYE 590 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~------~~~~~~~~~lv~e 590 (732)
.+.++.|..+.||++...+| .+++|+.... ..++..|.++++.+.. -.+.+++. +....+..+++|+
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34566677889999987655 4899988652 1233344444444421 12333332 2235677899999
Q ss_pred ecCCCchh--------------HHhhcC--CC--C-c-----ccCCHHHH------------------------------
Q 040398 591 YLENNSLA--------------HALFGG--EN--S-Q-----LKLNWSVR------------------------------ 616 (732)
Q Consensus 591 ~~~~gsL~--------------~~l~~~--~~--~-~-----~~l~~~~~------------------------------ 616 (732)
|++|..+. ..+|.. .. . . ..-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986442 112211 00 0 0 01122211
Q ss_pred -HHHHHHHHHHHHHHHh----------CCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 617 -QKICLGIARGLAFLHE----------ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 617 -~~i~~~i~~aL~yLH~----------~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
..+...+.+++++|+. ..+..++|+|+++.||+++.++.+.|+||+.+....
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g~ 254 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFDL 254 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEECC
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccCC
Confidence 1111234446667763 023469999999999999888889999999886543
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.89 E-value=2.4e-05 Score=84.78 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=49.4
Q ss_pred cceecccCceEEEEEEEc-CCeEEEEEEcccccc-------cchHHHHHHHHHHhcCCC--Cce-eeeeeeEEeCCEEEE
Q 040398 519 MNKIGEGGFGPVYKGQLT-DGTIIAVKLLSSKSR-------QGNREFLNEIGTISCLQH--PNL-VKLYGCCIEGDQLML 587 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~-~g~~vAvK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~nI-v~l~~~~~~~~~~~l 587 (732)
.+.+|.|..+.||+++.. +++.++||....... ....++..|.++++.+.. +.. .+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999764 468899997653211 123456778888887742 333 345543 4455689
Q ss_pred EEEecCCC
Q 040398 588 VYEYLENN 595 (732)
Q Consensus 588 v~e~~~~g 595 (732)
|||++++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.78 E-value=9.5e-05 Score=76.16 Aligned_cols=79 Identities=19% Similarity=0.269 Sum_probs=57.5
Q ss_pred CCCcccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCC-c--eeeeeeeEEeCCEEEEEEE
Q 040398 514 SNFDPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHP-N--LVKLYGCCIEGDQLMLVYE 590 (732)
Q Consensus 514 ~~f~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~-n--Iv~l~~~~~~~~~~~lv~e 590 (732)
.....++.+|.|..+.||+.+..||+.|.+|+...........|.+|.+.|+.+.-. . +.+++++ .. -++|||
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~lv~e 90 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RTLAME 90 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TEEEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ceEEEE
Confidence 345567889999999999999999999999987655444456688899988877422 2 3344443 22 368999
Q ss_pred ecCCCc
Q 040398 591 YLENNS 596 (732)
Q Consensus 591 ~~~~gs 596 (732)
|++++.
T Consensus 91 ~l~~~~ 96 (288)
T 3f7w_A 91 WVDERP 96 (288)
T ss_dssp CCCCCC
T ss_pred eecccC
Confidence 998764
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.78 E-value=5e-06 Score=78.40 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=17.4
Q ss_pred CccEEEccccc-ccCCcchhhcCCCCCcEEeCCCC
Q 040398 185 GLTRIILRNCN-IAGEIPEYIWGIKNLRFLDLSFN 218 (732)
Q Consensus 185 ~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N 218 (732)
+|++|+|++|. |++.--..+..+++|+.|+|+++
T Consensus 115 ~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 115 SMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp HCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESC
T ss_pred CCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCC
Confidence 45555555543 54444444455555555555554
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.70 E-value=7.8e-06 Score=77.10 Aligned_cols=85 Identities=11% Similarity=0.187 Sum_probs=44.6
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEcccCC-CcCcCCccccCc----cCCCeeeccCcC-CCCCCcccccCCCCc
Q 040398 113 NLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSG-LEGPIPPSISAL----DKLNQLRISDLQ-GPNQTFPMLRNMTGL 186 (732)
Q Consensus 113 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~ls~N~-l~~~~~~~l~~l~~L 186 (732)
+|+.|+++++.++..--..+..+++|+.|+|++|. ++..--..+..+ ++|+.|+|++|. +++.....+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444433222334445555555555543 433222333332 356666666653 555555566677778
Q ss_pred cEEEccccc-cc
Q 040398 187 TRIILRNCN-IA 197 (732)
Q Consensus 187 ~~L~Ls~N~-l~ 197 (732)
++|+|+++. ++
T Consensus 142 ~~L~L~~c~~It 153 (176)
T 3e4g_A 142 KYLFLSDLPGVK 153 (176)
T ss_dssp CEEEEESCTTCC
T ss_pred CEEECCCCCCCC
Confidence 888888775 44
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.69 E-value=4.8e-05 Score=83.01 Aligned_cols=79 Identities=10% Similarity=0.051 Sum_probs=48.6
Q ss_pred CceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhcccC---CCCCchhHHHHHHHHHHHH
Q 040398 636 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWG---YLTYKADVYSFGVVALEIV 712 (732)
Q Consensus 636 ~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~---~~~~k~DvwSlGvll~ell 712 (732)
..++|+|+++.||++++++ ++|+||+.+...++...-...-..-...|.+|+..... ......++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 4599999999999999876 99999998876443211100000001246666654321 1122345667888888877
Q ss_pred cCC
Q 040398 713 SGK 715 (732)
Q Consensus 713 tG~ 715 (732)
+++
T Consensus 311 ~~~ 313 (420)
T 2pyw_A 311 NKR 313 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 431
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.54 E-value=0.00042 Score=72.08 Aligned_cols=140 Identities=16% Similarity=0.154 Sum_probs=92.1
Q ss_pred ccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCC---CCceeeeeeeEEeCCEEEEEEEecCC
Q 040398 518 PMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQ---HPNLVKLYGCCIEGDQLMLVYEYLEN 594 (732)
Q Consensus 518 ~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lv~e~~~~ 594 (732)
..+.++.|....+|+... ++..+++|+.... ....+.+|.+.|+.+. ...+++++.+....+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 346799999999999876 4677889986532 3566888988888774 35577888888888889999999998
Q ss_pred Cchh--------H---HhhcCCC-Cc-----------------ccCCHHHHH---HHHH----------------HHHHH
Q 040398 595 NSLA--------H---ALFGGEN-SQ-----------------LKLNWSVRQ---KICL----------------GIARG 626 (732)
Q Consensus 595 gsL~--------~---~l~~~~~-~~-----------------~~l~~~~~~---~i~~----------------~i~~a 626 (732)
..+. . .+|.... .. ..-+|.... ++.. ++++.
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7542 1 2333211 10 012454321 1111 11111
Q ss_pred -HHHHHh-CCCCceEeCCCCCCCeEEcCCCCeEEEeee
Q 040398 627 -LAFLHE-ESRFKIVHRDIKATNVLLDRDLNPKISDFG 662 (732)
Q Consensus 627 -L~yLH~-~~~~~iiH~Dlkp~NILl~~~~~~kL~DfG 662 (732)
.+.|.. ..++.++|+|+.+.|++++.++ +.|+|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223421 2245689999999999999887 8899984
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.27 E-value=7.2e-05 Score=71.84 Aligned_cols=65 Identities=14% Similarity=0.166 Sum_probs=32.7
Q ss_pred cCCCCCCEEecccc-cCCcc----CCccccCCCCCCEEeCCCCcccc----cCCccccCCCCCCEEEccCcccc
Q 040398 61 GNITSLTYLDLEEN-QFSGT----IPRELGNLVNLETLRLSSNRLIG----NLPMELVKLKNLTDFRINDNNFN 125 (732)
Q Consensus 61 ~~l~~L~~L~Ls~N-~l~~~----~p~~l~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~ 125 (732)
.+-+.|++|+|++| +|... +...+..-+.|+.|+|++|+|.. .+...+..-+.|+.|+|++|.|.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 33455666666653 55421 23344445556666666666652 22233334455666666666554
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.27 E-value=5.3e-05 Score=72.77 Aligned_cols=109 Identities=17% Similarity=0.210 Sum_probs=70.3
Q ss_pred ccceEecccc-cccc----cCCccccCCCCCCEEecccccCCcc----CCccccCCCCCCEEeCCCCcccc----cCCcc
Q 040398 41 QLKYISVFAN-RLSG----NIPSHLGNITSLTYLDLEENQFSGT----IPRELGNLVNLETLRLSSNRLIG----NLPME 107 (732)
Q Consensus 41 ~L~~L~L~~n-~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~----~~p~~ 107 (732)
.|++|+|++| +|.. .+...+..-+.|++|+|++|+|... +...+..-+.|++|+|++|.|++ .+...
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~a 121 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRS 121 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHH
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHH
Confidence 4777888775 6652 2445566667888888888888733 33344456778888888888874 23334
Q ss_pred ccCCCCCCEEEccCc---cccc----cCCccccCCCCCCEEEcccCCCc
Q 040398 108 LVKLKNLTDFRINDN---NFNG----SAPDFIQSWTQLNRLEIQGSGLE 149 (732)
Q Consensus 108 l~~l~~L~~L~L~~N---~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 149 (732)
+..-+.|+.|+|++| .+.. .+.+.+..-+.|+.|+++.|.+.
T Consensus 122 L~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 122 TLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp TTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 555567888888765 3321 23345566678888888776653
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.26 E-value=0.0019 Score=67.56 Aligned_cols=160 Identities=14% Similarity=0.097 Sum_probs=88.7
Q ss_pred ccHHHHHHHhCCCcc-----cceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCc--eeeee
Q 040398 504 FTLKQIRAATSNFDP-----MNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPN--LVKLY 576 (732)
Q Consensus 504 ~~~~~~~~~~~~f~~-----~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~ 576 (732)
.+.+.+..+...|.+ +..++ |....||++...+|+.+++|+..... .....+..|..+++.+.... +++++
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 444555544444432 34566 77789999887778789999986331 12345666777776664222 34444
Q ss_pred ee-----EEeCCEEEEEEEecCCCchh-----H------H---hhcC----CC-CcccCCHHHH----HHH---------
Q 040398 577 GC-----CIEGDQLMLVYEYLENNSLA-----H------A---LFGG----EN-SQLKLNWSVR----QKI--------- 619 (732)
Q Consensus 577 ~~-----~~~~~~~~lv~e~~~~gsL~-----~------~---l~~~----~~-~~~~l~~~~~----~~i--------- 619 (732)
.. ....+..+++|+|++|..+. . . +|.. .. .....++... ..+
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 32 23356678999999885432 0 0 1210 00 0111222111 000
Q ss_pred ------HHHHHHHHHHHHh----CCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeC
Q 040398 620 ------CLGIARGLAFLHE----ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLD 667 (732)
Q Consensus 620 ------~~~i~~aL~yLH~----~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~ 667 (732)
...+.+.++.+.. ..+..++|+|+++.||+++ + .+.|+||+.+...
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 1111122333321 1234578999999999999 4 8999999877643
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.20 E-value=0.0036 Score=65.14 Aligned_cols=160 Identities=17% Similarity=0.153 Sum_probs=88.1
Q ss_pred ccHHHHHHHhCCCcc-----cceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCc--eeeee
Q 040398 504 FTLKQIRAATSNFDP-----MNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPN--LVKLY 576 (732)
Q Consensus 504 ~~~~~~~~~~~~f~~-----~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~ 576 (732)
++.+++......|.. .+.++.|....+|++...+| .+++|+..... ....+..|+++++.+...+ +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 445666666666654 34567788889999987665 58899876521 1234455666666553222 23333
Q ss_pred e------eEEeCCEEEEEEEecCCCchhH--------------HhhcC----CCCc-cc---CCHHHHHH----------
Q 040398 577 G------CCIEGDQLMLVYEYLENNSLAH--------------ALFGG----ENSQ-LK---LNWSVRQK---------- 618 (732)
Q Consensus 577 ~------~~~~~~~~~lv~e~~~~gsL~~--------------~l~~~----~~~~-~~---l~~~~~~~---------- 618 (732)
. +....+..+++|+|++|..+.. .+|.. .... .. ..|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 2 1233567789999999864311 11211 0000 00 11222110
Q ss_pred --HHHHHHHHHHHHHhC----CCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 619 --ICLGIARGLAFLHEE----SRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 619 --i~~~i~~aL~yLH~~----~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+...+.+.++++++. .+..++|+|+.+.||+++++..+.|+||+.+..
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244455565532 234589999999999999876568999988764
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.18 E-value=0.0014 Score=68.66 Aligned_cols=146 Identities=15% Similarity=0.119 Sum_probs=73.1
Q ss_pred cceecccCceE-EEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCC--CceeeeeeeEEeCCEEEEEEEecCCC
Q 040398 519 MNKIGEGGFGP-VYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQH--PNLVKLYGCCIEGDQLMLVYEYLENN 595 (732)
Q Consensus 519 ~~~LG~G~fg~-Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lv~e~~~~g 595 (732)
.+.|+.|.... +|+....+|+.+++|........ .+..|+++++.+.. -.+.+++.+..+.+ +++||++++.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~~---~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEGG---DTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTTC---CSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCCc---cccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 34566665554 66776544677778865443212 22345555555532 22445665533333 6899999876
Q ss_pred chhHHhhcCC---------------------CC-cccCCHHHHH-------H-------------HHHHHHHHHHHHH--
Q 040398 596 SLAHALFGGE---------------------NS-QLKLNWSVRQ-------K-------------ICLGIARGLAFLH-- 631 (732)
Q Consensus 596 sL~~~l~~~~---------------------~~-~~~l~~~~~~-------~-------------i~~~i~~aL~yLH-- 631 (732)
.+.+++.... .. ...++..... . ....+.+.++.+.
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 6654432110 00 0112211100 0 0011222233331
Q ss_pred -hCCCCceEeCCCCCCCeEEcCC----CCeEEEeeecceeCCc
Q 040398 632 -EESRFKIVHRDIKATNVLLDRD----LNPKISDFGLAKLDEE 669 (732)
Q Consensus 632 -~~~~~~iiH~Dlkp~NILl~~~----~~~kL~DfGla~~~~~ 669 (732)
...+..++|||+.+.||+++.+ ..+.|+||+.+...+.
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~ 220 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR 220 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence 1123468999999999999875 6789999998875443
No 437
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.05 E-value=0.0012 Score=68.19 Aligned_cols=142 Identities=12% Similarity=0.134 Sum_probs=75.7
Q ss_pred cceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCce-eeeeeeEEeCCEEEEEEEec-CCCc
Q 040398 519 MNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNL-VKLYGCCIEGDQLMLVYEYL-ENNS 596 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv~e~~-~~gs 596 (732)
++.|+.|....+|++ +.+++|+........ ....+|..+++.+...++ .+++++ .++.-++++||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence 677989999999998 458888876432211 122457777666643333 345443 344457899999 6544
Q ss_pred hhH------------------HhhcCCC-CcccCC-HHHHHHHHHH--------------HHHHH----HHHHh-CCCCc
Q 040398 597 LAH------------------ALFGGEN-SQLKLN-WSVRQKICLG--------------IARGL----AFLHE-ESRFK 637 (732)
Q Consensus 597 L~~------------------~l~~~~~-~~~~l~-~~~~~~i~~~--------------i~~aL----~yLH~-~~~~~ 637 (732)
+.. .+|.... ...... +.....+... +.+.+ +.+.. ..+..
T Consensus 95 l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~ 174 (301)
T 3dxq_A 95 MSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLA 174 (301)
T ss_dssp CCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCE
T ss_pred CCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCce
Confidence 431 1122111 000011 1111111110 11111 12211 12345
Q ss_pred eEeCCCCCCCeEEcCCCCeEEEeeecceeCCc
Q 040398 638 IVHRDIKATNVLLDRDLNPKISDFGLAKLDEE 669 (732)
Q Consensus 638 iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~ 669 (732)
++|+|+.+.||+ .+++.+.++||..+...++
T Consensus 175 l~HgDl~~~Nil-~~~~~~~lID~e~a~~g~~ 205 (301)
T 3dxq_A 175 ACHCDPLCENFL-DTGERMWIVDWEYSGMNDP 205 (301)
T ss_dssp EECSCCCGGGEE-ECSSCEEECCCTTCEEECT
T ss_pred eeccCCCcCCEE-ECCCCEEEEecccccCCCH
Confidence 799999999999 5667789999988765433
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.03 E-value=0.00058 Score=74.55 Aligned_cols=73 Identities=18% Similarity=0.291 Sum_probs=49.3
Q ss_pred cceecccCceEEEEEEEcC--------CeEEEEEEcccccccchHHHHHHHHHHhcCCCCce-eeeeeeEEeCCEEEEEE
Q 040398 519 MNKIGEGGFGPVYKGQLTD--------GTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNL-VKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~~--------g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv~ 589 (732)
++.|+.|-...||++...+ ++.+++|+.... .....+.+|..+++.+...++ .++++.+. + .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEE
Confidence 4668888889999998753 578999988432 112455678888888754444 45665543 2 3899
Q ss_pred EecCCCch
Q 040398 590 EYLENNSL 597 (732)
Q Consensus 590 e~~~~gsL 597 (732)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.95 E-value=0.0019 Score=68.98 Aligned_cols=143 Identities=18% Similarity=0.248 Sum_probs=83.5
Q ss_pred cceecccCceEEEEEEEc--------CCeEEEEEEcccccccchHHHHHHHHHHhcCCCCce-eeeeeeEEeCCEEEEEE
Q 040398 519 MNKIGEGGFGPVYKGQLT--------DGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNL-VKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~--------~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv~ 589 (732)
++.+..|-...+|++... +++.+.+|+.... ........+|.++++.+.-.++ .++++.+. + .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEE
Confidence 356777888899999864 3578999986432 2234556689888887743333 45665543 3 3899
Q ss_pred EecCCCchhH-----------------HhhcCCCC-cccC--CHHHHHHHHHHHHH-------------------HHHH-
Q 040398 590 EYLENNSLAH-----------------ALFGGENS-QLKL--NWSVRQKICLGIAR-------------------GLAF- 629 (732)
Q Consensus 590 e~~~~gsL~~-----------------~l~~~~~~-~~~l--~~~~~~~i~~~i~~-------------------aL~y- 629 (732)
||++|.+|.. .+|..... .... -|.++.++..++.. .++.
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999865431 11222111 1112 24555555544322 2233
Q ss_pred ---HHhC-CCCceEeCCCCCCCeEEcCC----CCeEEEeeeccee
Q 040398 630 ---LHEE-SRFKIVHRDIKATNVLLDRD----LNPKISDFGLAKL 666 (732)
Q Consensus 630 ---LH~~-~~~~iiH~Dlkp~NILl~~~----~~~kL~DfGla~~ 666 (732)
|... .+..++|+|+.+.||+++++ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 3222 23458899999999999876 6899999988864
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.81 E-value=0.0033 Score=68.98 Aligned_cols=74 Identities=16% Similarity=0.136 Sum_probs=47.9
Q ss_pred cceecccCceEEEEEEEcC-CeEEEEEEcccccccchHHHHHHHHHHhcCCCCcee-eeeeeEEeCCEEEEEEEecCCCc
Q 040398 519 MNKIGEGGFGPVYKGQLTD-GTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLV-KLYGCCIEGDQLMLVYEYLENNS 596 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~~-g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~l~~~~~~~~~~~lv~e~~~~gs 596 (732)
++.|+.|-...+|++...+ +..+++|+......... ...+|..+++.+...+++ ++++.+ .+ .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCcc
Confidence 4568888889999998775 57889998754322211 125788888888655554 566665 23 35999998754
Q ss_pred h
Q 040398 597 L 597 (732)
Q Consensus 597 L 597 (732)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 441
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.60 E-value=0.011 Score=62.08 Aligned_cols=33 Identities=30% Similarity=0.425 Sum_probs=28.4
Q ss_pred CceEeCCCCCCCeEEcCCCCeEEEeeecceeCC
Q 040398 636 FKIVHRDIKATNVLLDRDLNPKISDFGLAKLDE 668 (732)
Q Consensus 636 ~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~ 668 (732)
..++|+|+.+.||++++++.+.|+||+.+...+
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~ 238 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP 238 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence 468999999999999988889999998876543
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.44 E-value=0.005 Score=54.94 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=16.8
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEcccCCC
Q 040398 113 NLTDFRINDNNFNGSAPDFIQSWTQLNRLEIQGSGL 148 (732)
Q Consensus 113 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 148 (732)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 344444444444433334444444555555555544
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.41 E-value=0.0049 Score=54.98 Aligned_cols=55 Identities=22% Similarity=0.312 Sum_probs=29.5
Q ss_pred EEecccccCC-ccCCccccCCCCCCEEeCCCCcccccCCccccCCCCCCEEEccCccc
Q 040398 68 YLDLEENQFS-GTIPRELGNLVNLETLRLSSNRLIGNLPMELVKLKNLTDFRINDNNF 124 (732)
Q Consensus 68 ~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l 124 (732)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+..-+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5555555554 24444332 3466666666666533344455566666666666654
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.33 E-value=0.0039 Score=66.39 Aligned_cols=74 Identities=12% Similarity=0.180 Sum_probs=43.3
Q ss_pred cceecccCceEEEEEEEcC---------CeEEEEEEcccccccchHHHHHHHHHHhcCCCCce-eeeeeeEEeCCEEEEE
Q 040398 519 MNKIGEGGFGPVYKGQLTD---------GTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNL-VKLYGCCIEGDQLMLV 588 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~~---------g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv 588 (732)
.+.++.|....+|++...+ ++.+++|+........ .....|.++++.+...++ .++++.. ++ ++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~-~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL-YNTISEFEVYKTMSKYKIAPQLLNTF--NG--GRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-SCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-ecHHHHHHHHHHHHhcCCCCceEEec--CC--cEE
Confidence 3567778888999998654 2688899875432221 123567777776643333 3555443 33 689
Q ss_pred EEecCCCch
Q 040398 589 YEYLENNSL 597 (732)
Q Consensus 589 ~e~~~~gsL 597 (732)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.51 E-value=0.023 Score=60.88 Aligned_cols=144 Identities=17% Similarity=0.207 Sum_probs=83.0
Q ss_pred cceecccCceEEEEEEEcC--------CeEEEEEEccccccc-----------c-------hHHHHHHHHHHhcCCCCce
Q 040398 519 MNKIGEGGFGPVYKGQLTD--------GTIIAVKLLSSKSRQ-----------G-------NREFLNEIGTISCLQHPNL 572 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~~--------g~~vAvK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~H~nI 572 (732)
++.|..|-...+|++...+ ++.|.+++.-..... . .+....|.++++.+...++
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3556667778999998653 367888886432211 0 1122348888888754444
Q ss_pred -eeeeeeEEeCCEEEEEEEecCCCchhH--H---------------hhcCCC-CcccC--CHHHHHHHHHHHH-------
Q 040398 573 -VKLYGCCIEGDQLMLVYEYLENNSLAH--A---------------LFGGEN-SQLKL--NWSVRQKICLGIA------- 624 (732)
Q Consensus 573 -v~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~~-~~~~l--~~~~~~~i~~~i~------- 624 (732)
.++++++. + .+|+||++|-+|.. + +|.... ..... .+..+.++..++.
T Consensus 137 ~Pkl~~~~~--~--G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFP--Q--GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEET--T--EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeC--C--CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 46666653 2 28999999754421 1 122211 11112 2334444443321
Q ss_pred ---------------HHH----HHHHhC-CCCceEeCCCCCCCeEEcCC------CCeEEEeeeccee
Q 040398 625 ---------------RGL----AFLHEE-SRFKIVHRDIKATNVLLDRD------LNPKISDFGLAKL 666 (732)
Q Consensus 625 ---------------~aL----~yLH~~-~~~~iiH~Dlkp~NILl~~~------~~~kL~DfGla~~ 666 (732)
+-+ ++|... .+..++|+|+.+.||+++++ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 233332 23357899999999999887 7899999988764
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.33 E-value=0.035 Score=60.05 Aligned_cols=142 Identities=12% Similarity=0.150 Sum_probs=83.3
Q ss_pred cceecccCceEEEEEEEcC--------CeEEEEEEcccccccchHHHHHHHHHHhcCCCCce-eeeeeeEEeCCEEEEEE
Q 040398 519 MNKIGEGGFGPVYKGQLTD--------GTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNL-VKLYGCCIEGDQLMLVY 589 (732)
Q Consensus 519 ~~~LG~G~fg~Vy~a~~~~--------g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv~ 589 (732)
++.+..|-...+|++...+ ++.+++|+........ ....+|.++++.+.-.++ .++++.+ .+ ++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~--~~--~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADF--PE--GRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEE--TT--EEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEc--CC--CEEE
Confidence 4567778888999998753 5789999875432221 123567777777743333 3555432 33 6899
Q ss_pred EecCCCchhH-----------------HhhcCCC---------CcccCCHHHHHHHHHHH-------------------H
Q 040398 590 EYLENNSLAH-----------------ALFGGEN---------SQLKLNWSVRQKICLGI-------------------A 624 (732)
Q Consensus 590 e~~~~gsL~~-----------------~l~~~~~---------~~~~l~~~~~~~i~~~i-------------------~ 624 (732)
||++|.+|.. .+|.... ...+..|..+.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999865421 0121100 11112344444444322 2
Q ss_pred HHHHHHHh---------------------CCCCceEeCCCCCCCeEEcCCCCeEEEeeeccee
Q 040398 625 RGLAFLHE---------------------ESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKL 666 (732)
Q Consensus 625 ~aL~yLH~---------------------~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~ 666 (732)
+.+++|.+ ..+..++|+|+.+.||+ ++++.+.++||..|..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 22333321 11235789999999999 7788899999988864
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.06 E-value=0.41 Score=51.26 Aligned_cols=30 Identities=23% Similarity=0.385 Sum_probs=24.9
Q ss_pred ceEeCCCCCCCeEE------cCCCCeEEEeeeccee
Q 040398 637 KIVHRDIKATNVLL------DRDLNPKISDFGLAKL 666 (732)
Q Consensus 637 ~iiH~Dlkp~NILl------~~~~~~kL~DfGla~~ 666 (732)
.++|+|+.+.||++ +++..+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 3456799999988864
No 448
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=90.50 E-value=0.5 Score=45.51 Aligned_cols=101 Identities=16% Similarity=0.097 Sum_probs=64.6
Q ss_pred chhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHH-hCCCCceEeCCCCCCCeEEcCCCCeEEEeeecceeCCccCcee
Q 040398 596 SLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLH-EESRFKIVHRDIKATNVLLDRDLNPKISDFGLAKLDEEEKTHI 674 (732)
Q Consensus 596 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH-~~~~~~iiH~Dlkp~NILl~~~~~~kL~DfGla~~~~~~~~~~ 674 (732)
||.++|. ....+++++++|-++.|.+.+|.-+- ... + ..+=+.|..|++..+|.+.+.+ ..+.
T Consensus 34 SL~eIL~---~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~--~-~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 34 SLEEILR---LYNQPINEEQAWAVCYQCCGSLRAAARRRQ--P-RHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EHHHHHH---HHTSCCCHHHHHHHHHHHHHHHHHHHHTTC--C-CCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred cHHHHHH---HcCCCcCHHHHHHHHHHHHHHHHhhhhccc--C-CceecCCcceEEecCCceeccc-cccc---------
Confidence 8899884 34568999999999999999987662 111 1 1222346899999999987653 1110
Q ss_pred eecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCC
Q 040398 675 STRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNN 717 (732)
Q Consensus 675 ~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P 717 (732)
.....+.|||... ...+.+.=|||||+++|.-+--..|
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0122567888653 3556788999999999988754443
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=90.15 E-value=0.72 Score=44.35 Aligned_cols=115 Identities=10% Similarity=0.126 Sum_probs=79.0
Q ss_pred CCCceeeeeeeEEeCCEEEEEEEecCCC-chhHHhhcCCCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCceEeCCCCCC
Q 040398 568 QHPNLVKLYGCCIEGDQLMLVYEYLENN-SLAHALFGGENSQLKLNWSVRQKICLGIARGLAFLHEESRFKIVHRDIKAT 646 (732)
Q Consensus 568 ~H~nIv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~yLH~~~~~~iiH~Dlkp~ 646 (732)
.||++++. ..-.+++.+.+.++.-+.+ ++.. + ..++...+++++.+|+...++++. -+|--+.|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-------k~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-------KSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-------GGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-------HhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 68888866 5666777777777755422 4433 2 256788999999999998866654 478889999
Q ss_pred CeEEcCCCCeEEEeeecceeCCccCceeeecccCccccccchhcccCCCCCchhHHHHHHHHHHHHcCCCCCC
Q 040398 647 NVLLDRDLNPKISDFGLAKLDEEEKTHISTRVAGTIGYMAPEYALWGYLTYKADVYSFGVVALEIVSGKNNMS 719 (732)
Q Consensus 647 NILl~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~k~DvwSlGvll~elltG~~P~~ 719 (732)
||+++.++.+++.-.|+...+.+ . ..++..=.-.+=+++..+++++..|+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~P------------------~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVDP------------------L-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBSC------------------C-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCCCC------------------C-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999988876432222 1 11111223345567788888888775
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.68 E-value=2.7 Score=40.50 Aligned_cols=83 Identities=13% Similarity=0.193 Sum_probs=62.1
Q ss_pred CCCceeeeeeeEEeCCEEEEEEEecCCC-chhHHhhcCCCCcccCCHHHHHHHHHHHHHHHH-HHHhCCCCceEeCCCCC
Q 040398 568 QHPNLVKLYGCCIEGDQLMLVYEYLENN-SLAHALFGGENSQLKLNWSVRQKICLGIARGLA-FLHEESRFKIVHRDIKA 645 (732)
Q Consensus 568 ~H~nIv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~aL~-yLH~~~~~~iiH~Dlkp 645 (732)
.||++ -...-.+++.+.+.++.-+++ ++.. + ..++...+++++.+|+...+ +++. -+|--+.|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i-------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-I-------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-H-------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-H-------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 67887 344446778888888865443 4443 3 25678899999999988777 5554 57888999
Q ss_pred CCeEEcCCCCeEEEeeecce
Q 040398 646 TNVLLDRDLNPKISDFGLAK 665 (732)
Q Consensus 646 ~NILl~~~~~~kL~DfGla~ 665 (732)
+||++|.++.+++.-.|.-.
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKE 132 (219)
T ss_dssp GGEEECTTCCEEESCCEETT
T ss_pred ceEEEeCCCcEEEEEcCCcc
Confidence 99999999999998888643
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=69.55 E-value=0.65 Score=50.71 Aligned_cols=61 Identities=8% Similarity=0.067 Sum_probs=18.0
Q ss_pred ccceecccCceEEEEEEEcC-CeEEEE------EEcccc--cccchHHHHHHHHHHhcCCCCceeeeeeeEEe
Q 040398 518 PMNKIGEGGFGPVYKGQLTD-GTIIAV------KLLSSK--SRQGNREFLNEIGTISCLQHPNLVKLYGCCIE 581 (732)
Q Consensus 518 ~~~~LG~G~fg~Vy~a~~~~-g~~vAv------K~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 581 (732)
+.+.+| ||.||++.+.. ...||| |..+.. ..+....+.+|..+.+..+|||+++.+++-..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 446676 99999998763 357888 655432 22334568889999999999999999887653
No 452
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=45.09 E-value=45 Score=34.10 Aligned_cols=141 Identities=15% Similarity=0.153 Sum_probs=73.6
Q ss_pred cccceecccCceEEEEEEEcCCeEEEEEEcccccccchHHHHHHHHHHhcCCCCceeeeeee------------------
Q 040398 517 DPMNKIGEGGFGPVYKGQLTDGTIIAVKLLSSKSRQGNREFLNEIGTISCLQHPNLVKLYGC------------------ 578 (732)
Q Consensus 517 ~~~~~LG~G~fg~Vy~a~~~~g~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~------------------ 578 (732)
..++..-.|..| ||.+.. ++..|+||-.. .-..+.+-.++...-.+.-|+..-+.-.
T Consensus 72 ~~I~~s~~Gstg-vff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~ 146 (342)
T 1cja_A 72 KGIERSEKGTEG-LFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSF 146 (342)
T ss_dssp EEEEECCSTTSC-EEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSS
T ss_pred eEEEeccCCCCC-eEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhh
Confidence 344445556544 555544 57789999442 2233444455554444555553221100
Q ss_pred ----EEeCCEEEEEEEecCCCchhHHhhcCCCCcccCCHHHHHHHHHHH--HHHHHHHHhCC-CCceEe-CCCCCCCeEE
Q 040398 579 ----CIEGDQLMLVYEYLENNSLAHALFGGENSQLKLNWSVRQKICLGI--ARGLAFLHEES-RFKIVH-RDIKATNVLL 650 (732)
Q Consensus 579 ----~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i--~~aL~yLH~~~-~~~iiH-~Dlkp~NILl 650 (732)
.......+++|+|.+|..|.+.-+.. ....+... .+.++ +-+++++..++ +.+.+. .--.++|||+
T Consensus 147 ~~l~~l~~~~~~l~meyv~G~~L~e~~~~~--~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~ 220 (342)
T 1cja_A 147 RVITTLANQANILLMELVRGITLNKLTTTS--APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIML 220 (342)
T ss_dssp CHHHHHTTCSEEEEEECCCEEESTTCCSSS--HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEE
T ss_pred HHHHHhhcccceehhhhcCCCccccchhhh--hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEE
Confidence 00122467999999976655422110 01112222 23333 23466666553 333322 1247899999
Q ss_pred cCCCC-eEEEeeecceeCC
Q 040398 651 DRDLN-PKISDFGLAKLDE 668 (732)
Q Consensus 651 ~~~~~-~kL~DfGla~~~~ 668 (732)
++++. +.++|-+.+...+
T Consensus 221 ~~~n~~~~~IDhn~af~~~ 239 (342)
T 1cja_A 221 SERGATVVPIDSKIIPLDA 239 (342)
T ss_dssp ESBTTCEEECSCCCCCCCS
T ss_pred eCCCCeEEEEcCCccccCC
Confidence 87655 8899999886543
No 453
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=43.34 E-value=3.1e+02 Score=30.98 Aligned_cols=83 Identities=17% Similarity=0.168 Sum_probs=48.9
Q ss_pred eeeeeEEeCCEEEEEEEecCCCchhHHhhcCC----------CC-c--ccCCHHHHHHHHHHHHH--HHHHHHhCCCCce
Q 040398 574 KLYGCCIEGDQLMLVYEYLENNSLAHALFGGE----------NS-Q--LKLNWSVRQKICLGIAR--GLAFLHEESRFKI 638 (732)
Q Consensus 574 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~-~--~~l~~~~~~~i~~~i~~--aL~yLH~~~~~~i 638 (732)
+.|.+........ +.|++++.++.+++.... .. . .......+..++..+|- .+.|+=.
T Consensus 477 ~~Y~Vipls~~~G-LIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILG------ 549 (696)
T 2x6h_A 477 TPYKVLATSSKHG-FLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLG------ 549 (696)
T ss_dssp CCCCEEESSTTCE-EEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred eccEEEeccCCCC-eeeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHcc------
Confidence 3444444444333 347777666666653221 00 0 11123455566655543 3455532
Q ss_pred EeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 639 VHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 639 iH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
=+|=.++|||++..|++.=+|||.+
T Consensus 550 -lGDRH~~NILid~tG~v~HIDFG~~ 574 (696)
T 2x6h_A 550 -VGDRHLDNLLLTTNGKLFHIDFGYI 574 (696)
T ss_dssp -CCCCCTTTEEECTTSCEEECCCCSC
T ss_pred -CCCCCCcceEEeCCCCEEEEeehhh
Confidence 3688899999999999999999976
No 454
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=42.61 E-value=3.8e+02 Score=29.70 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=51.8
Q ss_pred eeeeeeEEeCCEEEEEEEecCCCchhHHhhcC----------CCC---cccCCHHHHHHHHHHHHH--HHHHHHhCCCCc
Q 040398 573 VKLYGCCIEGDQLMLVYEYLENNSLAHALFGG----------ENS---QLKLNWSVRQKICLGIAR--GLAFLHEESRFK 637 (732)
Q Consensus 573 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~----------~~~---~~~l~~~~~~~i~~~i~~--aL~yLH~~~~~~ 637 (732)
++.|.+........ +.|++++.++.+.+... ... .....+..+..++..+|- .+.|+=.-
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 34555555555444 45888876666654221 111 111235666666666553 45566433
Q ss_pred eEeCCCCCCCeEEcCCCCeEEEeeecc
Q 040398 638 IVHRDIKATNVLLDRDLNPKISDFGLA 664 (732)
Q Consensus 638 iiH~Dlkp~NILl~~~~~~kL~DfGla 664 (732)
+|=.++|||++.+|++.=+|||.+
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSC
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHh
Confidence 577899999999999999999976
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.00 E-value=52 Score=26.99 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=14.1
Q ss_pred cccCccCCCeeeccCcCCCCCCcccccCCCCccEEEc
Q 040398 155 SISALDKLNQLRISDLQGPNQTFPMLRNMTGLTRIIL 191 (732)
Q Consensus 155 ~~~~l~~L~~L~ls~N~l~~~~~~~l~~l~~L~~L~L 191 (732)
.|.++++|+.+.|-.+ ++.+....|.++.+|+.+.+
T Consensus 15 aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 15 LFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp TTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 3444444444444331 23333333444444444443
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.36 E-value=1.3e+02 Score=24.59 Aligned_cols=40 Identities=18% Similarity=0.155 Sum_probs=22.0
Q ss_pred CccccCCCCCCEEecccccCCccCCccccCCCCCCEEeCCC
Q 040398 57 PSHLGNITSLTYLDLEENQFSGTIPRELGNLVNLETLRLSS 97 (732)
Q Consensus 57 p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 97 (732)
...|.++++|+.+.|..+ ++..-...|.+|.+|+.+.+..
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 345566666666666553 3323334566666666666654
Done!