Your job contains 1 sequence.
>040416
YAVRKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTES
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040416
(47 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2085532 - symbol:AT3G10950 species:3702 "Arabi... 188 8.8e-15 1
TAIR|locus:505006406 - symbol:AT3G60245 species:3702 "Ara... 181 4.9e-14 1
SGD|S000006247 - symbol:RPL43A "Ribosomal 60S subunit pro... 119 1.8e-07 1
SGD|S000003855 - symbol:RPL43B "Ribosomal 60S subunit pro... 119 1.8e-07 1
UNIPROTKB|F1NDE1 - symbol:RPL37A "60S ribosomal protein L... 116 3.8e-07 1
UNIPROTKB|F2Z4M7 - symbol:RPL37A "60S ribosomal protein L... 116 3.8e-07 1
UNIPROTKB|P32046 - symbol:RPL37A "60S ribosomal protein L... 116 3.8e-07 1
DICTYBASE|DDB_G0281093 - symbol:rpl37A "ribosomal protein... 114 6.1e-07 1
WB|WBGene00004456 - symbol:rpl-43 species:6239 "Caenorhab... 114 6.1e-07 1
UNIPROTKB|Q3MIC0 - symbol:RPL37A "60S ribosomal protein L... 113 7.8e-07 1
UNIPROTKB|C9J4Z3 - symbol:RPL37A "60S ribosomal protein L... 113 7.8e-07 1
UNIPROTKB|P61513 - symbol:RPL37A "60S ribosomal protein L... 113 7.8e-07 1
MGI|MGI:98068 - symbol:Rpl37a "ribosomal protein L37a" sp... 113 7.8e-07 1
POMBASE|SPBC83.02c - symbol:rpl4302 "60S ribosomal protei... 113 7.8e-07 1
RGD|1561181 - symbol:Rpl37a-ps1 "ribosomal protein L37a, ... 113 7.8e-07 1
UNIPROTKB|P61515 - symbol:Rpl37a-ps1 "Putative 60S riboso... 113 7.8e-07 1
POMBASE|SPBC800.04c - symbol:rpl4301 "60S ribosomal prote... 112 1.0e-06 1
ZFIN|ZDB-GENE-070928-31 - symbol:zgc:171772 "zgc:171772" ... 109 2.1e-06 1
RGD|1583665 - symbol:LOC679823 "similar to 60S ribosomal ... 105 5.5e-06 1
UNIPROTKB|D4A829 - symbol:D4A829 "Uncharacterized protein... 105 5.5e-06 1
UNIPROTKB|G4N6C5 - symbol:MGG_06571 "60S ribosomal protei... 102 1.1e-05 1
UNIPROTKB|I3L707 - symbol:RPL37A "Uncharacterized protein... 100 1.9e-05 1
FB|FBgn0261608 - symbol:RpL37A "Ribosomal protein L37A" s... 98 3.0e-05 1
UNIPROTKB|J9NVE6 - symbol:RPL37A "Uncharacterized protein... 90 0.00021 1
RGD|1559951 - symbol:RGD1559951 "similar to 60S ribosomal... 90 0.00021 1
UNIPROTKB|F1M3Q2 - symbol:F1M3Q2 "Uncharacterized protein... 85 0.00072 1
>TAIR|locus:2085532 [details] [associations]
symbol:AT3G10950 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR002674 InterPro:IPR011331 InterPro:IPR011332
Pfam:PF01780 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0006412 GO:GO:0003735 EMBL:AC009991 KO:K02921 GO:GO:0022625
IPI:IPI00547833 RefSeq:NP_187706.1 UniGene:At.53262
ProteinModelPortal:Q9SRK6 SMR:Q9SRK6 STRING:Q9SRK6 PaxDb:Q9SRK6
EnsemblPlants:AT3G10950.1 GeneID:820266 KEGG:ath:AT3G10950
TAIR:At3g10950 eggNOG:COG1997 HOGENOM:HOG000229493
InParanoid:Q9SRK6 OMA:ISQHAEY PhylomeDB:Q9SRK6
ProtClustDB:CLSN2684048 Genevestigator:Q9SRK6 GermOnline:AT3G10950
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280 Uniprot:Q9SRK6
Length = 92
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 38/48 (79%), Positives = 40/48 (83%)
Query: 1 YAV-RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTES 47
Y+V RK VGIWGCKD KVKAGGAYT+N SAVT R TIRRLREQTES
Sbjct: 45 YSVKRKVVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92
>TAIR|locus:505006406 [details] [associations]
symbol:AT3G60245 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR002674 InterPro:IPR011331 InterPro:IPR011332
Pfam:PF01780 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0006412 GO:GO:0003735 EMBL:AL163852 KO:K02921 GO:GO:0022625
PIR:T49219 eggNOG:COG1997 HOGENOM:HOG000229493
ProtClustDB:CLSN2684048 Gene3D:2.20.25.30 SUPFAM:SSF57829
TIGRFAMs:TIGR00280 EMBL:AY117196 EMBL:AY080669 EMBL:AY088178
IPI:IPI00523107 RefSeq:NP_567096.1 UniGene:At.43549
ProteinModelPortal:Q8RXU5 SMR:Q8RXU5 STRING:Q8RXU5 PRIDE:Q8RXU5
EnsemblPlants:AT3G60245.1 GeneID:825195 KEGG:ath:AT3G60245
TAIR:At3g60245 InParanoid:Q8RXU5 OMA:ISTGIWQ PhylomeDB:Q8RXU5
Genevestigator:Q8RXU5 GermOnline:AT3G60245 Uniprot:Q8RXU5
Length = 92
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 37/47 (78%), Positives = 38/47 (80%)
Query: 1 YAV-RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTE 46
Y V RKAVGIWGCKD KVKAGGAYT+N SAVT R TIRRLREQ E
Sbjct: 45 YGVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQIE 91
>SGD|S000006247 [details] [associations]
symbol:RPL43A "Ribosomal 60S subunit protein L43A"
species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002674
InterPro:IPR011331 InterPro:IPR011332 Pfam:PF01780 SGD:S000006247
GO:GO:0046872 EMBL:Z71255 EMBL:BK006949 GO:GO:0003735 GO:GO:0002181
PDB:4B6A PDBsum:4B6A EMBL:Z49219 RefSeq:NP_012628.3 GeneID:853557
KEGG:sce:YJR094W-A KO:K02921 RefSeq:NP_012631.3 GeneID:853560
KEGG:sce:YJR097W GO:GO:0022625 EMBL:Z73616 Gene3D:2.20.25.30
SUPFAM:SSF57829 TIGRFAMs:TIGR00280 PDB:1K5Y PDB:1S1I PDB:3IZS
PDB:3O58 PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I
PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I
PIR:S54068 RefSeq:NP_015368.1 ProteinModelPortal:P0CX25 SMR:P0CX25
EnsemblFungi:YJR094W-A EnsemblFungi:YPR043W GeneID:856156
KEGG:sce:YPR043W CYGD:YPR043w EvolutionaryTrace:P0CX25
NextBio:974302 ArrayExpress:P0CX25 GermOnline:YPR043W
Uniprot:P0CX25
Length = 92
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 24/44 (54%), Positives = 28/44 (63%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTES 47
R A GIW C K AGGAYT++ +A T R TIRRLRE E+
Sbjct: 49 RGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTIRRLREMVEA 92
>SGD|S000003855 [details] [associations]
symbol:RPL43B "Ribosomal 60S subunit protein L43B"
species:4932 "Saccharomyces cerevisiae" [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR002674
InterPro:IPR011331 InterPro:IPR011332 Pfam:PF01780 SGD:S000003855
EMBL:BK006943 GO:GO:0046872 GO:GO:0003735 GO:GO:0002181
RefSeq:NP_012628.3 GeneID:853557 KEGG:sce:YJR094W-A KO:K02921
RefSeq:NP_012631.3 GeneID:853560 KEGG:sce:YJR097W GO:GO:0022625
EMBL:Z49594 Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280
GeneTree:ENSGT00390000016988 PIR:S54068 RefSeq:NP_015368.1
EnsemblFungi:YJR094W-A EnsemblFungi:YPR043W GeneID:856156
KEGG:sce:YPR043W NextBio:974302 EMBL:Z49595
ProteinModelPortal:P0CX26 SMR:P0CX26 CYGD:YJR094w-a
ArrayExpress:P0CX26 GermOnline:YJR094W-A Uniprot:P0CX26
Length = 92
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 24/44 (54%), Positives = 28/44 (63%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTES 47
R A GIW C K AGGAYT++ +A T R TIRRLRE E+
Sbjct: 49 RGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTIRRLREMVEA 92
>UNIPROTKB|F1NDE1 [details] [associations]
symbol:RPL37A "60S ribosomal protein L37a" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR002674 InterPro:IPR011331 InterPro:IPR011332
Pfam:PF01780 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280
GeneTree:ENSGT00390000016988 OMA:GSCRKTV EMBL:AADN02016814
IPI:IPI00821456 Ensembl:ENSGALT00000038155 ArrayExpress:F1NDE1
Uniprot:F1NDE1
Length = 92
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
RKAVGIW C K AGGA+T N SAVT + IRRL+E
Sbjct: 49 RKAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
>UNIPROTKB|F2Z4M7 [details] [associations]
symbol:RPL37A "60S ribosomal protein L37a" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR002674 InterPro:IPR011331 InterPro:IPR011332
Pfam:PF01780 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280
GeneTree:ENSGT00390000016988 OMA:GSCRKTV IPI:IPI00575505
UniGene:Gga.28126 NextBio:20920205 EMBL:AADN02016814
ProteinModelPortal:F2Z4M7 PRIDE:F2Z4M7 Ensembl:ENSGALT00000018702
ArrayExpress:F2Z4M7 Uniprot:F2Z4M7
Length = 91
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
RKAVGIW C K AGGA+T N SAVT + IRRL+E
Sbjct: 48 RKAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 87
>UNIPROTKB|P32046 [details] [associations]
symbol:RPL37A "60S ribosomal protein L37a" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR002674 InterPro:IPR011331
InterPro:IPR011332 Pfam:PF01780 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 KO:K02921 eggNOG:COG1997
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280 CTD:6168
HOVERGEN:HBG056620 OrthoDB:EOG412M71 EMBL:D10731 EMBL:D14167
IPI:IPI00575505 PIR:S24170 RefSeq:NP_001072961.1 UniGene:Gga.28126
ProteinModelPortal:P32046 SMR:P32046 STRING:P32046 PRIDE:P32046
GeneID:769981 KEGG:gga:769981 InParanoid:P32046 NextBio:20920205
ArrayExpress:P32046 Uniprot:P32046
Length = 92
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 24/40 (60%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
RKAVGIW C K AGGA+T N SAVT + IRRL+E
Sbjct: 49 RKAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
>DICTYBASE|DDB_G0281093 [details] [associations]
symbol:rpl37A "ribosomal protein" species:44689
"Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002674
InterPro:IPR011331 InterPro:IPR011332 Pfam:PF01780
dictyBase:DDB_G0281093 GenomeReviews:CM000152_GR GO:GO:0046872
GO:GO:0006412 EMBL:AAFI02000040 GO:GO:0005840 GO:GO:0003735
KO:K02921 eggNOG:COG1997 Gene3D:2.20.25.30 SUPFAM:SSF57829
TIGRFAMs:TIGR00280 OMA:ISTGIWQ RefSeq:XP_640812.1 HSSP:Q5QM99
ProteinModelPortal:Q54UG4 SMR:Q54UG4 STRING:Q54UG4 PRIDE:Q54UG4
EnsemblProtists:DDB0220688 GeneID:8622866 KEGG:ddi:DDB_G0281093
ProtClustDB:PTZ00255 Uniprot:Q54UG4
Length = 91
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 2 AVRKA-VGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
AVR++ VGIW C KV AGGA+T++ + T R TIRRLRE
Sbjct: 46 AVRRSSVGIWKCNGCRKVLAGGAWTMSTAAGATVRSTIRRLRE 88
>WB|WBGene00004456 [details] [associations]
symbol:rpl-43 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] InterPro:IPR002674 InterPro:IPR011331
InterPro:IPR011332 Pfam:PF01780 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0046872 GO:GO:0006412
GO:GO:0005840 EMBL:AL110490 GO:GO:0003735 KO:K02921 eggNOG:COG1997
HOGENOM:HOG000229493 Gene3D:2.20.25.30 SUPFAM:SSF57829
TIGRFAMs:TIGR00280 OMA:ISTGIWQ GeneTree:ENSGT00390000016988
PIR:T26996 RefSeq:NP_496957.1 ProteinModelPortal:Q9U2A8 SMR:Q9U2A8
DIP:DIP-27124N MINT:MINT-1077447 STRING:Q9U2A8 PaxDb:Q9U2A8
EnsemblMetazoa:Y48B6A.2.1 EnsemblMetazoa:Y48B6A.2.2
EnsemblMetazoa:Y48B6A.2.3 GeneID:175070 KEGG:cel:CELE_Y48B6A.2
UCSC:Y48B6A.2.1 CTD:175070 WormBase:Y48B6A.2 InParanoid:Q9U2A8
NextBio:886628 Uniprot:Q9U2A8
Length = 91
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 24/43 (55%), Positives = 26/43 (60%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTE 46
RKA GIW C KV AGGAY +A T R TIRRLR+ E
Sbjct: 49 RKATGIWNCAKCHKVVAGGAYVYGTVTAATVRSTIRRLRDLKE 91
>UNIPROTKB|Q3MIC0 [details] [associations]
symbol:RPL37A "60S ribosomal protein L37a" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002674
InterPro:IPR011331 InterPro:IPR011332 Pfam:PF01780 GO:GO:0046872
GO:GO:0006412 GO:GO:0003735 KO:K02921 GO:GO:0022625 eggNOG:COG1997
HOGENOM:HOG000229493 Gene3D:2.20.25.30 SUPFAM:SSF57829
TIGRFAMs:TIGR00280 CTD:6168 EMBL:BC102044 IPI:IPI00699404
RefSeq:NP_001030180.1 UniGene:Bt.16064 ProteinModelPortal:Q3MIC0
SMR:Q3MIC0 STRING:Q3MIC0 PRIDE:Q3MIC0 Ensembl:ENSBTAT00000005015
GeneID:504413 KEGG:bta:504413 GeneTree:ENSGT00390000016988
HOVERGEN:HBG056620 InParanoid:Q3MIC0 OMA:GSCRKTV OrthoDB:EOG412M71
NextBio:20866649 Uniprot:Q3MIC0
Length = 92
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+AVGIW C K AGGA+T N SAVT + IRRL+E
Sbjct: 49 RRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
>UNIPROTKB|C9J4Z3 [details] [associations]
symbol:RPL37A "60S ribosomal protein L37a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR002674 InterPro:IPR011331
InterPro:IPR011332 Pfam:PF01780 GO:GO:0006412 EMBL:CH471063
GO:GO:0005840 GO:GO:0003735 EMBL:AC073321 HOGENOM:HOG000229493
Gene3D:2.20.25.30 SUPFAM:SSF57829 ChiTaRS:RpL37A UniGene:Hs.433701
HGNC:HGNC:10348 IPI:IPI00926815 SMR:C9J4Z3 STRING:C9J4Z3
Ensembl:ENST00000456586 Uniprot:C9J4Z3
Length = 68
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+AVGIW C K AGGA+T N SAVT + IRRL+E
Sbjct: 25 RRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 64
>UNIPROTKB|P61513 [details] [associations]
symbol:RPL37A "60S ribosomal protein L37a" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735 "structural
constituent of ribosome" evidence=NAS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR002674 InterPro:IPR011331 InterPro:IPR011332
Pfam:PF01780 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0046872
GO:GO:0006413 EMBL:CH471063 GO:GO:0003735 KO:K02921 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 EMBL:AC073321 eggNOG:COG1997 HOGENOM:HOG000229493
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280 CTD:6168
ChiTaRS:RpL37A HOVERGEN:HBG056620 OMA:GSCRKTV OrthoDB:EOG412M71
EMBL:L06499 EMBL:X66699 EMBL:L22154 EMBL:AK289472 EMBL:CR542152
EMBL:BC000555 EMBL:BC014262 EMBL:BC016748 EMBL:BC067789
EMBL:BC082239 IPI:IPI00414860 PIR:JN0875 RefSeq:NP_000989.1
UniGene:Hs.433701 ProteinModelPortal:P61513 SMR:P61513
IntAct:P61513 MINT:MINT-1152059 STRING:P61513 PhosphoSite:P61513
DMDM:47606455 PaxDb:P61513 PeptideAtlas:P61513 PRIDE:P61513
Ensembl:ENST00000491306 GeneID:6168 KEGG:hsa:6168 UCSC:uc002vgf.3
GeneCards:GC02P217327 HGNC:HGNC:10348 MIM:613314 neXtProt:NX_P61513
PharmGKB:PA34737 InParanoid:P61513 PhylomeDB:P61513 GenomeRNAi:6168
NextBio:23961 ArrayExpress:P61513 Bgee:P61513 CleanEx:HS_RPL37A
Genevestigator:P61513 GermOnline:ENSG00000197756 Uniprot:P61513
Length = 92
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+AVGIW C K AGGA+T N SAVT + IRRL+E
Sbjct: 49 RRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
>MGI|MGI:98068 [details] [associations]
symbol:Rpl37a "ribosomal protein L37a" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR002674 InterPro:IPR011331
InterPro:IPR011332 Pfam:PF01780 MGI:MGI:98068 GO:GO:0046872
GO:GO:0006412 GO:GO:0003735 KO:K02921 GO:GO:0022625 eggNOG:COG1997
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280 CTD:6168
ChiTaRS:RpL37A HOVERGEN:HBG056620 OMA:GSCRKTV OrthoDB:EOG412M71
EMBL:X73331 EMBL:AK003501 EMBL:AK011634 EMBL:AK012396 EMBL:AK012439
EMBL:AK012655 EMBL:AK014283 IPI:IPI00222550 PIR:S42109
RefSeq:NP_033110.1 UniGene:Mm.21529 UniGene:Mm.466509
ProteinModelPortal:P61514 SMR:P61514 STRING:P61514
PhosphoSite:P61514 PaxDb:P61514 PRIDE:P61514
Ensembl:ENSMUST00000059980 GeneID:19981 KEGG:mmu:19981
InParanoid:P61514 NextBio:297487 Bgee:P61514 CleanEx:MM_RPL37A
Genevestigator:P61514 GermOnline:ENSMUSG00000046330 Uniprot:P61514
Length = 92
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+AVGIW C K AGGA+T N SAVT + IRRL+E
Sbjct: 49 RRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
>POMBASE|SPBC83.02c [details] [associations]
symbol:rpl4302 "60S ribosomal protein L37a (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR002674 InterPro:IPR011331
InterPro:IPR011332 Pfam:PF01780 PomBase:SPBC83.02c GO:GO:0046872
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
KO:K02921 GO:GO:0022625 HOGENOM:HOG000229493 Gene3D:2.20.25.30
SUPFAM:SSF57829 TIGRFAMs:TIGR00280 OMA:ISTGIWQ OrthoDB:EOG4ZSDCZ
EMBL:AB005904 PIR:T40691 RefSeq:NP_595634.1
ProteinModelPortal:O94686 SMR:O94686 STRING:O94686
EnsemblFungi:SPBC83.02c.1 GeneID:2540665 KEGG:spo:SPBC83.02c
NextBio:20801789 Uniprot:O94686
Length = 94
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 25/45 (55%), Positives = 29/45 (64%)
Query: 4 RKAVGIWGC--KDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTE 46
R A GIW C K SK AGGA+T+ +A +AR TIRRLRE E
Sbjct: 49 RTAAGIWKCSGKGCSKTLAGGAWTVTTAAATSARSTIRRLREMVE 93
>RGD|1561181 [details] [associations]
symbol:Rpl37a-ps1 "ribosomal protein L37a, pseudogene 1"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR002674
InterPro:IPR011331 InterPro:IPR011332 Pfam:PF01780 RGD:1561181
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
eggNOG:COG1997 Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280
HOVERGEN:HBG056620 OrthoDB:EOG412M71 UniGene:Rn.991 EMBL:X14069
EMBL:BC088285 IPI:IPI00476451 PIR:S05014 ProteinModelPortal:P61515
SMR:P61515 IntAct:P61515 STRING:P61515 PRIDE:P61515
InParanoid:P61515 ArrayExpress:P61515 Genevestigator:P61515
GermOnline:ENSRNOG00000030438 Uniprot:P61515
Length = 92
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+AVGIW C K AGGA+T N SAVT + IRRL+E
Sbjct: 49 RRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
>UNIPROTKB|P61515 [details] [associations]
symbol:Rpl37a-ps1 "Putative 60S ribosomal protein L37a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR002674 InterPro:IPR011331
InterPro:IPR011332 Pfam:PF01780 RGD:1561181 GO:GO:0046872
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 eggNOG:COG1997
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280
HOVERGEN:HBG056620 OrthoDB:EOG412M71 UniGene:Rn.991 EMBL:X14069
EMBL:BC088285 IPI:IPI00476451 PIR:S05014 ProteinModelPortal:P61515
SMR:P61515 IntAct:P61515 STRING:P61515 PRIDE:P61515
InParanoid:P61515 ArrayExpress:P61515 Genevestigator:P61515
GermOnline:ENSRNOG00000030438 Uniprot:P61515
Length = 92
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 23/40 (57%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+AVGIW C K AGGA+T N SAVT + IRRL+E
Sbjct: 49 RRAVGIWHCGSCMKTVAGGAWTYNTTSAVTVKSAIRRLKE 88
>POMBASE|SPBC800.04c [details] [associations]
symbol:rpl4301 "60S ribosomal protein L37a (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR002674 InterPro:IPR011331
InterPro:IPR011332 Pfam:PF01780 PomBase:SPBC800.04c GO:GO:0046872
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
KO:K02921 GO:GO:0022625 eggNOG:COG1997 HOGENOM:HOG000229493
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280 OMA:GSCRKTV
RefSeq:NP_595105.1 ProteinModelPortal:Q9HGL8 SMR:Q9HGL8
IntAct:Q9HGL8 STRING:Q9HGL8 PRIDE:Q9HGL8 EnsemblFungi:SPBC800.04c.1
GeneID:2540682 KEGG:spo:SPBC800.04c OrthoDB:EOG4ZSDCZ
NextBio:20801806 Uniprot:Q9HGL8
Length = 94
Score = 112 (44.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 25/45 (55%), Positives = 29/45 (64%)
Query: 4 RKAVGIWGC--KDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTE 46
R A GIW C K KV AGGA+T+ +A +AR TIRRLRE E
Sbjct: 49 RTAAGIWCCNGKGCKKVLAGGAWTVTTAAATSARSTIRRLREMVE 93
>ZFIN|ZDB-GENE-070928-31 [details] [associations]
symbol:zgc:171772 "zgc:171772" species:7955 "Danio
rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002674 InterPro:IPR011331 InterPro:IPR011332
Pfam:PF01780 ZFIN:ZDB-GENE-070928-31 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 KO:K02921 eggNOG:COG1997 HOGENOM:HOG000229493
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280
GeneTree:ENSGT00390000016988 HOVERGEN:HBG056620 OMA:GSCRKTV
OrthoDB:EOG412M71 EMBL:CU633990 EMBL:BC148177 IPI:IPI00868348
RefSeq:NP_001098996.1 UniGene:Dr.26908 SMR:A7YY10 STRING:A7YY10
Ensembl:ENSDART00000062153 GeneID:572109 KEGG:dre:572109
NextBio:20890841 Uniprot:A7YY10
Length = 92
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
RKAVGIW C K AGGA++ N SAVT + I+RL+E
Sbjct: 49 RKAVGIWHCGSCMKTVAGGAWSYNTTSAVTVKSAIKRLKE 88
>RGD|1583665 [details] [associations]
symbol:LOC679823 "similar to 60S ribosomal protein L37a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] InterPro:IPR002674 InterPro:IPR011331
InterPro:IPR011332 Pfam:PF01780 RGD:1583665 RGD:2319947
GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 OMA:ISQHAEY
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280
GeneTree:ENSGT00390000016988 OrthoDB:EOG412M71 IPI:IPI00200768
PRIDE:D4A7B1 Ensembl:ENSRNOT00000052265 NextBio:717331
Uniprot:D4A7B1
Length = 92
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+A+GIW C K AGGA+ N SAVT + IRRL+E
Sbjct: 49 RRAIGIWHCGSCMKTVAGGAWAYNPTSAVTVKSAIRRLKE 88
>UNIPROTKB|D4A829 [details] [associations]
symbol:D4A829 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002674
InterPro:IPR011331 InterPro:IPR011332 Pfam:PF01780 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.20.25.30 SUPFAM:SSF57829
TIGRFAMs:TIGR00280 GeneTree:ENSGT00390000016988 OrthoDB:EOG412M71
IPI:IPI00361446 Ensembl:ENSRNOT00000040519 Uniprot:D4A829
Length = 92
Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+AVG W C K AGGA+T N SAVT + IRRL+E
Sbjct: 49 RRAVGSWRCGSCMKTVAGGAWTHNTTSAVTVKSAIRRLKE 88
>UNIPROTKB|G4N6C5 [details] [associations]
symbol:MGG_06571 "60S ribosomal protein L43" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR002674 InterPro:IPR011331
InterPro:IPR011332 Pfam:PF01780 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 GO:GO:0043581 EMBL:CM001234 KO:K02921
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280
RefSeq:XP_003716966.1 ProteinModelPortal:G4N6C5 SMR:G4N6C5
EnsemblFungi:MGG_06571T0 GeneID:2684726 KEGG:mgr:MGG_06571
Uniprot:G4N6C5
Length = 92
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R +VGIW C K +GGAY ++ +A AR T+RRLRE
Sbjct: 49 RHSVGIWNCGACKKTISGGAYVVSTPAAAAARSTLRRLRE 88
>UNIPROTKB|I3L707 [details] [associations]
symbol:RPL37A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR002674 InterPro:IPR011331 InterPro:IPR011332
Pfam:PF01780 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625 OMA:ISQHAEY
Gene3D:2.20.25.30 SUPFAM:SSF57829 TIGRFAMs:TIGR00280
GeneTree:ENSGT00390000016988 EMBL:CU640450
Ensembl:ENSSSCT00000023605 Uniprot:I3L707
Length = 89
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+A GIW C K+ AGGA+T N SAV + IR+L+E
Sbjct: 48 RRAAGIWHCGSCMKMVAGGAWTYNTTSAVMVKSAIRQLKE 87
>FB|FBgn0261608 [details] [associations]
symbol:RpL37A "Ribosomal protein L37A" species:7227
"Drosophila melanogaster" [GO:0006412 "translation" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] InterPro:IPR002674
InterPro:IPR011331 InterPro:IPR011332 Pfam:PF01780 EMBL:AE014134
GO:GO:0046872 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000022 KO:K02921 eggNOG:COG1997 Gene3D:2.20.25.30
SUPFAM:SSF57829 TIGRFAMs:TIGR00280 OMA:ISTGIWQ CTD:6168
ChiTaRS:RpL37A GeneTree:ENSGT00390000016988 EMBL:AY071189
EMBL:AY071725 RefSeq:NP_001188691.1 RefSeq:NP_524781.1
RefSeq:NP_723060.1 UniGene:Dm.1819 ProteinModelPortal:Q9VMU4
SMR:Q9VMU4 IntAct:Q9VMU4 MINT:MINT-943843 STRING:Q9VMU4
PaxDb:Q9VMU4 PRIDE:Q9VMU4 EnsemblMetazoa:FBtr0079016
EnsemblMetazoa:FBtr0079017 EnsemblMetazoa:FBtr0302570 GeneID:44783
KEGG:dme:Dmel_CG5827 FlyBase:FBgn0261608 InParanoid:Q9VMU4
OrthoDB:EOG48CZC2 PhylomeDB:Q9VMU4 GenomeRNAi:44783 NextBio:837609
Bgee:Q9VMU4 GermOnline:CG5827 Uniprot:Q9VMU4
Length = 92
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTE 46
R VGIW CK + AGGA+ + +A + R +RRLRE E
Sbjct: 49 RAVVGIWSCKRCKRTVAGGAWVYSTTAAASVRSAVRRLRETKE 91
>UNIPROTKB|J9NVE6 [details] [associations]
symbol:RPL37A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR002674
InterPro:IPR011331 InterPro:IPR011332 Pfam:PF01780 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.20.25.30 SUPFAM:SSF57829
TIGRFAMs:TIGR00280 GeneTree:ENSGT00390000016988 EMBL:AAEX03006553
Ensembl:ENSCAFT00000027516 OMA:KPRINIY Uniprot:J9NVE6
Length = 94
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+AVGI C K GG +T N SAVT + IRRL+E
Sbjct: 51 RQAVGICHCGSCMKTITGGTWTYNTTSAVTVKSAIRRLKE 90
>RGD|1559951 [details] [associations]
symbol:RGD1559951 "similar to 60S ribosomal protein L37a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002674 InterPro:IPR011331 InterPro:IPR011332
Pfam:PF01780 RGD:1559951 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.20.25.30 SUPFAM:SSF57829 GeneTree:ENSGT00390000016988
OrthoDB:EOG412M71 IPI:IPI00362545 Ensembl:ENSRNOT00000004303
UCSC:RGD:1559951 Uniprot:D4A2M8
Length = 91
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLRE 43
R+A+GIW C + A G T N SAVT + IRRL+E
Sbjct: 48 RRAIGIWHCDPCMETVAVGPSTYNTTSAVTVKSAIRRLKE 87
>UNIPROTKB|F1M3Q2 [details] [associations]
symbol:F1M3Q2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002674
InterPro:IPR011331 InterPro:IPR011332 Pfam:PF01780 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.20.25.30 SUPFAM:SSF57829
IPI:IPI00568658 Ensembl:ENSRNOT00000046580 Uniprot:F1M3Q2
Length = 92
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 4 RKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRR 40
R+AVGIW C K AG A+ N +AVT + +RR
Sbjct: 49 RRAVGIWHCGSCMKTVAGRAWIYNTTTAVTVKFAVRR 85
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.129 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 47 47 0.00091 102 3 11 22 0.48 26
29 0.47 25
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 339 (36 KB)
Total size of DFA: 54 KB (2057 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 5.02u 0.20s 5.22t Elapsed: 00:00:01
Total cpu time: 5.02u 0.20s 5.22t Elapsed: 00:00:01
Start: Mon May 20 19:04:11 2013 End: Mon May 20 19:04:12 2013