Query 040416
Match_columns 47
No_of_seqs 124 out of 236
Neff 4.0
Searched_HMMs 29240
Date Mon Mar 25 13:01:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040416.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040416hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iz5_m 60S ribosomal protein L 99.9 7.2E-27 2.5E-31 139.7 4.7 47 1-47 46-92 (92)
2 3izc_m 60S ribosomal protein R 99.9 8.6E-27 3E-31 139.4 4.6 46 2-47 47-92 (92)
3 4a17_Y RPL37A, 60S ribosomal p 99.9 8.8E-27 3E-31 141.8 4.0 46 2-47 47-92 (103)
4 3cc2_Z 50S ribosomal protein L 99.9 3.9E-24 1.4E-28 132.1 2.5 46 2-47 71-116 (116)
5 1vq8_Z 50S ribosomal protein L 99.9 3E-23 1E-27 121.0 2.5 46 2-47 38-83 (83)
6 3j21_i 50S ribosomal protein L 99.8 2.8E-21 9.6E-26 113.7 2.0 37 2-38 46-82 (83)
7 3jyw_9 60S ribosomal protein L 99.8 5.4E-22 1.8E-26 114.3 -1.1 36 2-37 37-72 (72)
8 1ffk_W Ribosomal protein L37AE 99.8 1.7E-20 5.9E-25 107.9 0.5 35 2-36 38-72 (73)
9 3j21_g 50S ribosomal protein L 96.9 8.5E-05 2.9E-09 39.9 -0.8 15 4-18 23-37 (51)
10 2kvh_A Zinc finger and BTB dom 83.5 0.59 2E-05 18.6 1.4 11 10-20 4-14 (27)
11 3a43_A HYPD, hydrogenase nicke 80.9 0.79 2.7E-05 27.5 1.8 17 7-23 68-84 (139)
12 3ga8_A HTH-type transcriptiona 80.8 2.5 8.6E-05 22.6 3.7 34 7-46 34-67 (78)
13 2m0f_A Zinc finger and BTB dom 78.7 1.1 3.7E-05 17.6 1.4 11 10-20 3-13 (29)
14 2kvg_A Zinc finger and BTB dom 78.4 1.3 4.3E-05 17.7 1.6 11 10-20 4-14 (27)
15 2kvf_A Zinc finger and BTB dom 78.2 1.1 3.9E-05 17.7 1.4 11 10-20 4-14 (28)
16 1lko_A Rubrerythrin all-iron(I 78.0 2 7E-05 26.5 3.1 19 3-21 149-167 (191)
17 2m0d_A Zinc finger and BTB dom 77.5 1.2 4.1E-05 17.5 1.4 11 10-20 4-14 (30)
18 2elm_A Zinc finger protein 406 76.9 1.4 4.9E-05 19.0 1.6 13 9-21 9-21 (37)
19 2elx_A Zinc finger protein 406 75.5 1.4 4.9E-05 18.2 1.4 11 10-20 8-18 (35)
20 1l1o_C Replication protein A 7 75.5 1.1 3.8E-05 27.5 1.3 16 6-21 59-74 (181)
21 2lvu_A Zinc finger and BTB dom 76.8 0.61 2.1E-05 18.4 0.0 12 10-21 3-14 (26)
22 1srk_A Zinc finger protein ZFP 74.2 1.6 5.5E-05 18.2 1.4 11 10-20 8-18 (35)
23 2els_A Zinc finger protein 406 73.7 1.7 5.7E-05 18.3 1.4 12 9-20 9-20 (36)
24 2kdx_A HYPA, hydrogenase/ureas 73.2 1.7 5.9E-05 24.9 1.7 22 4-25 68-89 (119)
25 2elp_A Zinc finger protein 406 72.2 1.8 6.1E-05 18.4 1.3 13 9-21 9-21 (37)
26 1znf_A 31ST zinc finger from X 72.1 1 3.4E-05 17.6 0.4 12 10-21 2-13 (27)
27 1rik_A E6APC1 peptide; E6-bind 71.8 2.1 7.1E-05 16.8 1.4 11 10-20 3-13 (29)
28 2m0e_A Zinc finger and BTB dom 71.5 0.87 3E-05 17.8 0.1 11 10-20 3-13 (29)
29 2elq_A Zinc finger protein 406 71.1 2.1 7.3E-05 18.0 1.4 12 9-20 9-20 (36)
30 2elt_A Zinc finger protein 406 70.3 2.3 7.8E-05 17.7 1.4 12 9-20 9-20 (36)
31 2elo_A Zinc finger protein 406 70.1 1.3 4.5E-05 18.7 0.5 11 10-20 10-20 (37)
32 2en2_A B-cell lymphoma 6 prote 69.2 2.4 8.1E-05 18.4 1.4 12 9-20 11-22 (42)
33 1yuz_A Nigerythrin; rubrythrin 69.1 2.5 8.5E-05 26.6 1.9 14 8-21 170-183 (202)
34 1ard_A Yeast transcription fac 68.9 1.3 4.3E-05 17.4 0.3 11 10-20 3-13 (29)
35 2eoz_A Zinc finger protein 473 68.3 2.4 8.3E-05 18.9 1.3 12 10-21 13-24 (46)
36 2epc_A Zinc finger protein 32; 68.1 2.6 8.9E-05 18.2 1.4 12 9-20 11-22 (42)
37 2elr_A Zinc finger protein 406 68.0 1.4 4.6E-05 18.5 0.3 12 9-20 9-20 (36)
38 1klr_A Zinc finger Y-chromosom 67.8 1.2 4.1E-05 17.5 0.1 12 10-21 3-14 (30)
39 1d0q_A DNA primase; zinc-bindi 67.4 1.5 5.2E-05 24.6 0.6 36 7-44 56-92 (103)
40 2elv_A Zinc finger protein 406 67.1 2.8 9.7E-05 17.5 1.4 12 9-20 9-20 (36)
41 1p7a_A BF3, BKLF, kruppel-like 66.8 1.5 5E-05 18.6 0.3 11 10-20 12-22 (37)
42 2ytp_A Zinc finger protein 484 66.7 2.4 8.2E-05 18.9 1.1 12 10-21 13-24 (46)
43 2lvr_A Zinc finger and BTB dom 69.9 1.2 4.1E-05 17.7 0.0 12 10-21 4-15 (30)
44 2eox_A Zinc finger protein 473 66.0 3.4 0.00012 18.1 1.6 13 9-21 12-24 (44)
45 2yts_A Zinc finger protein 484 65.8 2.6 8.8E-05 18.7 1.1 13 9-21 12-24 (46)
46 1paa_A Yeast transcription fac 65.8 1.7 6E-05 17.2 0.5 11 10-20 3-13 (30)
47 2epu_A Zinc finger protein 32; 65.7 3.5 0.00012 18.3 1.6 11 10-20 13-23 (45)
48 2emy_A Zinc finger protein 268 65.3 2.7 9.1E-05 18.7 1.1 11 10-20 13-23 (46)
49 2ept_A Zinc finger protein 32; 65.2 3.2 0.00011 17.9 1.4 12 9-20 10-21 (41)
50 2ytf_A Zinc finger protein 268 65.2 2.7 9.2E-05 18.6 1.1 12 10-21 13-24 (46)
51 2lvt_A Zinc finger and BTB dom 68.7 1.3 4.5E-05 17.6 0.0 12 10-21 3-14 (29)
52 3u50_C Telomerase-associated p 64.6 2.3 8E-05 26.6 1.1 13 6-18 56-68 (172)
53 2yrj_A Zinc finger protein 473 64.5 3.3 0.00011 18.3 1.4 13 9-21 12-24 (46)
54 2ep3_A Zinc finger protein 484 64.3 2.9 9.7E-05 18.6 1.1 12 10-21 13-24 (46)
55 2eof_A Zinc finger protein 268 64.1 3.4 0.00012 18.0 1.4 12 9-20 12-23 (44)
56 1njq_A Superman protein; zinc- 64.1 3.4 0.00012 17.7 1.4 11 10-20 7-17 (39)
57 2el5_A Zinc finger protein 268 63.6 3.6 0.00012 17.8 1.4 11 10-20 11-21 (42)
58 2ysp_A Zinc finger protein 224 63.3 3.5 0.00012 18.3 1.3 12 9-20 12-23 (46)
59 2em3_A Zinc finger protein 28 63.2 3.6 0.00012 18.2 1.4 11 10-20 13-23 (46)
60 2yu5_A Zinc finger protein 473 62.9 3.8 0.00013 18.0 1.4 11 10-20 13-23 (44)
61 2emj_A Zinc finger protein 28 62.7 3.8 0.00013 18.2 1.4 12 9-20 12-23 (46)
62 2ab3_A ZNF29; zinc finger prot 62.7 4.7 0.00016 15.6 1.6 11 10-20 3-15 (29)
63 2yto_A Zinc finger protein 484 62.4 3.2 0.00011 18.5 1.1 13 9-21 12-24 (46)
64 2ema_A Zinc finger protein 347 62.3 3.3 0.00011 18.4 1.1 11 10-20 13-23 (46)
65 2eow_A Zinc finger protein 347 62.2 3.9 0.00013 18.0 1.4 12 9-20 12-23 (46)
66 2emh_A Zinc finger protein 484 62.0 3.3 0.00011 18.4 1.1 12 10-21 13-24 (46)
67 2emi_A Zinc finger protein 484 62.0 3.9 0.00013 18.1 1.4 11 10-20 13-23 (46)
68 3j20_Y 30S ribosomal protein S 61.9 3.7 0.00013 21.0 1.4 12 8-19 36-47 (50)
69 6rxn_A Rubredoxin; electron tr 61.8 3.6 0.00012 21.0 1.3 12 9-20 4-15 (46)
70 2emb_A Zinc finger protein 473 61.7 4 0.00014 17.9 1.4 11 10-20 13-23 (44)
71 2epv_A Zinc finger protein 268 61.7 4 0.00014 18.0 1.4 12 10-21 13-24 (44)
72 2en1_A Zinc finger protein 224 61.5 4.6 0.00016 17.8 1.6 12 10-21 13-24 (46)
73 1fv5_A First zinc finger of U- 61.4 2.4 8.2E-05 19.8 0.5 11 10-20 9-19 (36)
74 2epw_A Zinc finger protein 268 61.2 3.5 0.00012 18.2 1.1 12 10-21 13-24 (46)
75 2emf_A Zinc finger protein 484 61.0 4.2 0.00014 18.1 1.4 12 9-20 12-23 (46)
76 2emx_A Zinc finger protein 268 60.9 4.3 0.00015 17.8 1.4 13 9-21 10-22 (44)
77 3iuf_A Zinc finger protein UBI 60.9 4.1 0.00014 18.8 1.4 11 10-20 8-18 (48)
78 1yui_A GAGA-factor; complex (D 60.7 4.1 0.00014 18.9 1.4 11 10-20 25-35 (54)
79 2eor_A Zinc finger protein 224 60.4 4.3 0.00015 17.9 1.4 11 10-20 13-23 (46)
80 2gmg_A Hypothetical protein PF 60.3 2.4 8.2E-05 25.2 0.5 10 10-19 68-77 (105)
81 2en3_A ZFP-95, zinc finger pro 60.3 4.4 0.00015 17.9 1.4 11 10-20 13-23 (46)
82 2em2_A Zinc finger protein 28 60.1 4.4 0.00015 18.0 1.4 12 9-20 12-23 (46)
83 2ep2_A Zinc finger protein 484 60.0 3.8 0.00013 18.2 1.1 13 9-21 12-24 (46)
84 2eq0_A Zinc finger protein 347 59.9 3.8 0.00013 18.2 1.1 12 10-21 13-24 (46)
85 2ytk_A Zinc finger protein 347 59.7 3.9 0.00013 18.1 1.1 12 9-20 12-23 (46)
86 2en8_A Zinc finger protein 224 59.4 3.9 0.00013 18.0 1.1 12 10-21 13-24 (46)
87 2eme_A Zinc finger protein 473 59.2 4 0.00014 18.0 1.1 13 9-21 12-24 (46)
88 3pwf_A Rubrerythrin; non heme 59.1 5 0.00017 24.6 1.9 14 8-21 137-150 (170)
89 2eoj_A Zinc finger protein 268 59.1 3.3 0.00011 18.1 0.8 11 10-20 13-23 (44)
90 2em7_A Zinc finger protein 224 59.1 4 0.00014 18.1 1.1 13 9-21 12-24 (46)
91 2ytj_A Zinc finger protein 484 59.1 4.7 0.00016 17.8 1.4 13 9-21 12-24 (46)
92 1rim_A E6APC2 peptide; E6-bind 59.0 1.8 6.2E-05 18.3 -0.1 11 10-20 3-13 (33)
93 2yu8_A Zinc finger protein 347 59.0 4 0.00014 18.0 1.1 12 10-21 13-24 (46)
94 2em9_A Zinc finger protein 224 58.7 4.8 0.00017 17.7 1.4 12 9-20 12-23 (46)
95 2ytg_A ZFP-95, zinc finger pro 58.7 4.8 0.00016 17.8 1.4 13 9-21 12-24 (46)
96 2eq3_A Zinc finger protein 347 58.6 3.1 0.00011 18.4 0.7 11 10-20 13-23 (46)
97 2eoy_A Zinc finger protein 473 58.6 4.9 0.00017 17.8 1.4 11 10-20 13-23 (46)
98 2eml_A Zinc finger protein 28 58.3 5 0.00017 17.7 1.4 13 9-21 12-24 (46)
99 2ene_A Zinc finger protein 347 57.7 5.1 0.00018 17.7 1.4 12 10-21 13-24 (46)
100 2ep0_A Zinc finger protein 28 57.5 5.2 0.00018 17.6 1.4 11 10-20 13-23 (46)
101 3u5c_f 40S ribosomal protein S 57.5 3.2 0.00011 25.1 0.8 11 10-20 139-149 (152)
102 2em4_A Zinc finger protein 28 57.4 5.2 0.00018 17.7 1.4 11 10-20 13-23 (46)
103 2en6_A Zinc finger protein 268 57.3 6.1 0.00021 17.4 1.6 13 9-21 12-24 (46)
104 2eoo_A ZFP-95, zinc finger pro 57.2 5.3 0.00018 17.7 1.4 12 10-21 13-24 (46)
105 2c6a_A Ubiquitin-protein ligas 57.2 4.3 0.00015 21.2 1.1 11 8-18 12-22 (46)
106 2el6_A Zinc finger protein 268 57.0 5.4 0.00019 17.7 1.4 12 10-21 13-24 (46)
107 2emm_A ZFP-95, zinc finger pro 57.0 5.4 0.00018 17.5 1.4 12 10-21 13-24 (46)
108 2ytb_A Zinc finger protein 32; 56.8 2.8 9.5E-05 18.1 0.3 13 9-21 11-23 (42)
109 2enf_A Zinc finger protein 347 56.8 2.4 8.3E-05 18.8 0.1 12 10-21 13-24 (46)
110 2v3b_B Rubredoxin 2, rubredoxi 56.4 7.2 0.00024 20.3 1.9 13 9-21 3-15 (55)
111 2el4_A Zinc finger protein 268 55.9 5.8 0.0002 17.4 1.4 12 10-21 13-24 (46)
112 2enc_A Zinc finger protein 224 55.6 5.9 0.0002 17.5 1.4 12 9-20 12-23 (46)
113 2emp_A Zinc finger protein 347 55.4 5.9 0.0002 17.4 1.4 11 10-20 13-23 (46)
114 2emg_A Zinc finger protein 484 55.1 3.1 0.00011 18.4 0.3 11 10-20 13-23 (46)
115 4gop_C Putative uncharacterize 55.0 4 0.00014 27.7 1.0 18 7-24 325-342 (444)
116 2em5_A ZFP-95, zinc finger pro 55.0 5.1 0.00018 17.7 1.1 12 10-21 13-24 (46)
117 2em8_A Zinc finger protein 224 55.0 6.1 0.00021 17.5 1.4 12 9-20 12-23 (46)
118 2ytd_A Zinc finger protein 473 54.7 6.2 0.00021 17.4 1.4 13 9-21 12-24 (46)
119 4ayb_P DNA-directed RNA polyme 54.3 2.3 7.8E-05 22.5 -0.2 13 8-20 2-14 (48)
120 2yso_A ZFP-95, zinc finger pro 54.3 6.3 0.00021 17.4 1.4 12 9-20 12-23 (46)
121 2drp_A Protein (tramtrack DNA- 54.0 6.1 0.00021 18.6 1.4 12 9-20 10-21 (66)
122 2em6_A Zinc finger protein 224 53.9 3.4 0.00012 18.4 0.4 11 10-20 13-23 (46)
123 2k4x_A 30S ribosomal protein S 53.8 5.1 0.00018 20.8 1.1 12 8-19 35-46 (55)
124 1bbo_A Human enhancer-binding 53.7 6.5 0.00022 17.9 1.4 12 9-20 29-40 (57)
125 2eos_A B-cell lymphoma 6 prote 53.6 3.4 0.00012 17.9 0.3 12 9-20 11-22 (42)
126 2epr_A POZ-, at HOOK-, and zin 53.5 7.5 0.00026 17.4 1.6 12 9-20 12-23 (48)
127 2d9h_A Zinc finger protein 692 53.3 6.3 0.00021 19.3 1.4 11 10-20 8-18 (78)
128 2yth_A Zinc finger protein 224 53.3 3 0.0001 18.6 0.1 11 10-20 13-23 (46)
129 2eon_A ZFP-95, zinc finger pro 52.8 3.1 0.00011 18.6 0.1 11 10-20 13-23 (46)
130 1yk4_A Rubredoxin, RD; electro 52.7 9.2 0.00032 19.6 2.0 13 9-21 2-14 (52)
131 2yte_A Zinc finger protein 473 52.6 3.6 0.00012 17.7 0.3 11 10-20 11-21 (42)
132 1s24_A Rubredoxin 2; electron 52.6 8.9 0.0003 21.9 2.1 15 7-21 33-47 (87)
133 2lk0_A RNA-binding protein 5; 52.4 5.5 0.00019 18.5 1.0 11 8-18 4-14 (32)
134 2en7_A Zinc finger protein 268 52.3 2.9 0.0001 18.2 -0.0 12 10-21 13-24 (44)
135 2kn9_A Rubredoxin; metalloprot 52.2 8.6 0.00029 21.7 1.9 14 8-21 26-39 (81)
136 2ep1_A Zinc finger protein 484 52.1 3 0.0001 18.4 -0.0 11 10-20 13-23 (46)
137 2en9_A Zinc finger protein 28 51.8 3.8 0.00013 18.2 0.3 11 10-20 13-23 (46)
138 2kfq_A FP1; protein, de novo p 51.8 1.7 5.9E-05 18.2 -0.9 11 10-20 3-13 (32)
139 2i5o_A DNA polymerase ETA; zin 51.3 8.2 0.00028 19.0 1.6 14 8-21 8-21 (39)
140 2ytn_A Zinc finger protein 347 51.2 3.4 0.00011 18.3 0.1 12 10-21 13-24 (46)
141 2eq1_A Zinc finger protein 347 51.1 2.9 9.9E-05 18.6 -0.2 12 10-21 13-24 (46)
142 2eou_A Zinc finger protein 473 50.6 3.5 0.00012 18.2 0.1 12 9-20 12-23 (44)
143 2yti_A Zinc finger protein 347 50.2 2.6 8.8E-05 18.8 -0.4 11 10-20 13-23 (46)
144 2eop_A Zinc finger protein 268 50.2 4.2 0.00014 17.9 0.3 11 10-20 13-23 (46)
145 2eoe_A Zinc finger protein 347 50.1 4.4 0.00015 17.8 0.4 11 10-20 13-23 (46)
146 2yrm_A B-cell lymphoma 6 prote 49.9 4.2 0.00014 17.9 0.3 12 9-20 10-21 (43)
147 3nrl_A Uncharacterized protein 49.9 4.7 0.00016 23.2 0.6 17 11-27 32-48 (81)
148 1f2i_G Fusion of N-terminal 17 49.9 7.7 0.00026 18.6 1.4 11 10-20 50-60 (73)
149 1vd4_A Transcription initiatio 49.4 9.1 0.00031 18.4 1.6 12 9-20 14-25 (62)
150 3mhs_C SAGA-associated factor 49.1 6.7 0.00023 23.2 1.2 20 8-27 69-88 (99)
151 2enh_A Zinc finger protein 28 49.1 4.5 0.00015 18.0 0.3 11 10-20 13-23 (46)
152 3uk3_C Zinc finger protein 217 48.6 8.8 0.0003 17.4 1.4 12 9-20 32-43 (57)
153 2ely_A Zinc finger protein 224 48.4 4.6 0.00016 17.9 0.3 11 10-20 13-23 (46)
154 1x5w_A Zinc finger protein 64, 48.0 8.8 0.0003 18.4 1.4 11 10-20 10-20 (70)
155 2eom_A ZFP-95, zinc finger pro 48.0 4.1 0.00014 18.2 0.1 11 10-20 13-23 (46)
156 2eov_A Zinc finger protein 484 47.7 4.9 0.00017 17.7 0.4 11 10-20 13-23 (46)
157 1dx8_A Rubredoxin; electron tr 47.6 8.2 0.00028 21.0 1.3 13 8-20 6-18 (70)
158 2epq_A POZ-, at HOOK-, and zin 47.4 6.1 0.00021 17.4 0.7 11 10-20 11-21 (45)
159 2eq4_A Zinc finger protein 224 47.3 3.9 0.00013 18.0 -0.0 12 10-21 13-24 (46)
160 2elz_A Zinc finger protein 224 47.3 4.2 0.00015 18.0 0.1 11 10-20 13-23 (46)
161 1zfo_A LAsp-1; LIM domain, zin 46.9 5.4 0.00018 18.2 0.4 9 11-19 5-13 (31)
162 2epx_A Zinc finger protein 28 46.8 5.1 0.00017 17.6 0.3 11 10-20 13-23 (47)
163 2eq2_A Zinc finger protein 347 46.8 3.3 0.00011 18.4 -0.4 11 10-20 13-23 (46)
164 2emz_A ZFP-95, zinc finger pro 46.7 4.4 0.00015 18.0 0.1 11 10-20 13-23 (46)
165 2cr8_A MDM4 protein; ZF-ranbp 46.6 7.9 0.00027 20.7 1.1 10 9-18 11-20 (53)
166 2ytq_A Zinc finger protein 268 46.5 5.2 0.00018 17.7 0.4 11 10-20 13-23 (46)
167 2xzm_9 RPS31E; ribosome, trans 46.5 6.3 0.00022 25.0 0.9 11 9-19 131-141 (189)
168 4gzn_C ZFP-57, zinc finger pro 46.2 9.3 0.00032 19.2 1.4 11 10-20 33-43 (60)
169 2eps_A POZ-, at HOOK-, and zin 45.0 11 0.00036 17.5 1.4 12 9-20 12-23 (54)
170 1x6h_A Transcriptional repress 45.0 8.8 0.0003 18.7 1.1 12 9-20 47-58 (86)
171 1dxg_A Desulforedoxin; non-hem 44.8 12 0.00042 17.6 1.6 13 8-20 5-17 (36)
172 2eoh_A Zinc finger protein 28 44.7 5 0.00017 17.8 0.1 11 10-20 13-23 (46)
173 2ct1_A Transcriptional repress 44.5 11 0.00036 18.4 1.4 12 9-20 45-56 (77)
174 2emk_A Zinc finger protein 28 44.4 5.9 0.0002 17.5 0.4 12 10-21 13-24 (46)
175 2lce_A B-cell lymphoma 6 prote 44.0 11 0.00037 18.3 1.4 11 10-20 46-56 (74)
176 1x6e_A Zinc finger protein 24; 43.9 11 0.00037 18.2 1.4 11 10-20 43-53 (72)
177 2djr_A Zinc finger BED domain- 43.8 8.3 0.00028 21.3 1.0 19 11-29 30-49 (76)
178 2k1p_A Zinc finger RAN-binding 43.8 6.6 0.00023 18.4 0.5 11 8-18 5-15 (33)
179 1dl6_A Transcription factor II 43.6 8.2 0.00028 20.0 0.9 18 6-23 27-44 (58)
180 1qyp_A RNA polymerase II; tran 43.5 13 0.00045 18.7 1.7 13 8-20 42-54 (57)
181 2eoq_A Zinc finger protein 224 42.9 4.7 0.00016 17.8 -0.1 11 10-20 13-23 (46)
182 2epz_A Zinc finger protein 28 42.9 6.3 0.00021 17.4 0.3 11 10-20 13-23 (46)
183 1e8j_A Rubredoxin; iron-sulfur 42.6 7.2 0.00025 20.1 0.6 12 9-20 3-14 (52)
184 2kmk_A Zinc finger protein GFI 42.6 12 0.0004 18.0 1.4 11 10-20 2-12 (82)
185 2adr_A ADR1; transcription reg 42.5 12 0.00041 17.2 1.4 12 9-20 30-41 (60)
186 1zfd_A SWI5; DNA binding motif 42.4 5.5 0.00019 16.0 0.1 11 10-20 4-16 (32)
187 2au3_A DNA primase; zinc ribbo 42.2 7 0.00024 26.3 0.6 18 7-26 53-70 (407)
188 2ytr_A Zinc finger protein 347 41.9 4.8 0.00016 17.7 -0.2 11 10-20 13-23 (46)
189 2ctu_A Zinc finger protein 483 41.8 14 0.00049 17.2 1.6 13 9-21 18-30 (73)
190 2ytt_A Zinc finger protein 473 41.7 4.9 0.00017 17.8 -0.2 11 10-20 13-23 (46)
191 2ytm_A Zinc finger protein 28 41.7 4.7 0.00016 17.9 -0.2 11 10-20 13-23 (46)
192 4rxn_A Rubredoxin; electron tr 39.9 13 0.00044 19.4 1.3 12 9-20 3-14 (54)
193 2k5c_A Uncharacterized protein 39.0 17 0.00058 21.3 1.8 23 9-32 51-73 (95)
194 1va1_A Transcription factor SP 38.9 13 0.00045 15.6 1.1 11 10-20 9-21 (37)
195 3htk_C E3 SUMO-protein ligase 38.8 37 0.0013 22.8 3.7 37 8-44 217-255 (267)
196 1vfy_A Phosphatidylinositol-3- 38.8 12 0.00042 19.7 1.1 14 10-23 28-41 (73)
197 2em0_A Zinc finger protein 224 38.4 7.2 0.00025 17.1 0.1 11 10-20 13-23 (46)
198 1sp2_A SP1F2; zinc finger, tra 38.3 7 0.00024 15.6 0.1 11 10-20 3-15 (31)
199 1bhi_A CRE-BP1, ATF-2; CRE bin 38.2 16 0.00056 15.1 1.3 11 10-20 7-19 (38)
200 2cot_A Zinc finger protein 435 37.7 15 0.00053 17.8 1.4 11 10-20 47-57 (77)
201 1llm_C Chimera of ZIF23-GCN4; 37.1 16 0.00054 18.2 1.4 11 10-20 4-14 (88)
202 1x4u_A Zinc finger, FYVE domai 37.0 14 0.00046 20.0 1.1 13 11-23 32-44 (84)
203 2yw8_A RUN and FYVE domain-con 36.3 14 0.00048 19.9 1.1 13 11-23 37-49 (82)
204 1a1h_A QGSR zinc finger peptid 35.5 15 0.00051 18.0 1.1 12 9-20 62-73 (90)
205 2epp_A POZ-, at HOOK-, and zin 35.1 8.6 0.00029 20.0 0.1 11 10-20 14-24 (66)
206 2dmi_A Teashirt homolog 3; zin 35.0 18 0.00062 18.7 1.4 12 9-20 19-30 (115)
207 2wbs_A Krueppel-like factor 4; 35.0 18 0.00062 17.6 1.4 12 9-20 65-76 (89)
208 2yt9_A Zinc finger-containing 34.9 18 0.00062 17.9 1.4 12 9-20 7-18 (95)
209 1joc_A EEA1, early endosomal a 34.4 15 0.00052 21.4 1.1 13 11-23 87-99 (125)
210 2lv2_A Insulinoma-associated p 34.2 18 0.00063 19.2 1.4 11 10-20 57-67 (85)
211 3es4_A Uncharacterized protein 34.2 18 0.00061 21.1 1.4 14 4-17 41-54 (116)
212 1z2q_A LM5-1; membrane protein 34.2 16 0.00054 19.7 1.1 12 11-22 39-50 (84)
213 2eod_A TNF receptor-associated 33.0 24 0.00081 16.7 1.6 11 10-20 11-21 (66)
214 1dvp_A HRS, hepatocyte growth 32.5 16 0.00056 22.5 1.1 14 10-23 178-191 (220)
215 1wfk_A Zinc finger, FYVE domai 31.9 18 0.00062 19.9 1.1 12 11-22 27-38 (88)
216 1twf_I B12.6, DNA-directed RNA 31.9 29 0.00098 20.1 2.1 15 7-21 24-38 (122)
217 2ctd_A Zinc finger protein 512 30.6 19 0.00065 19.0 1.1 10 10-19 35-44 (96)
218 2lcq_A Putative toxin VAPC6; P 30.6 22 0.00077 20.8 1.5 13 9-21 132-144 (165)
219 2gqj_A Zinc finger protein KIA 30.6 11 0.00038 19.5 0.1 11 10-20 25-35 (98)
220 1y02_A CARP2, FYVE-ring finger 29.8 20 0.00068 21.1 1.1 15 11-25 37-51 (120)
221 2csh_A Zinc finger protein 297 29.8 24 0.00083 18.1 1.4 12 9-20 65-76 (110)
222 2lo3_A SAGA-associated factor 29.5 23 0.00077 18.3 1.2 11 11-21 19-29 (44)
223 2elu_A Zinc finger protein 406 29.5 49 0.0017 16.3 2.4 23 11-45 11-33 (37)
224 3t7l_A Zinc finger FYVE domain 29.4 21 0.00072 19.5 1.1 16 10-25 37-52 (90)
225 2ebq_A Nuclear pore complex pr 29.0 14 0.00049 18.9 0.3 14 5-18 7-20 (47)
226 2dmd_A Zinc finger protein 64, 28.8 27 0.00091 17.3 1.4 11 10-20 65-75 (96)
227 2dlq_A GLI-kruppel family memb 28.6 26 0.00089 18.0 1.4 11 10-20 95-105 (124)
228 2eln_A Zinc finger protein 406 28.6 24 0.00081 16.1 1.1 11 10-20 10-22 (38)
229 2ebr_A Nuclear pore complex pr 28.5 11 0.00036 19.3 -0.2 12 6-17 8-19 (47)
230 3gj5_B Nuclear pore complex pr 28.4 17 0.0006 17.4 0.6 12 7-18 5-16 (34)
231 1ncs_A Peptide M30F, transcrip 28.2 26 0.0009 15.6 1.2 13 9-21 18-32 (47)
232 3zyq_A Hepatocyte growth facto 28.1 22 0.00074 22.3 1.1 16 10-25 181-196 (226)
233 3o9x_A Uncharacterized HTH-typ 27.8 40 0.0014 18.4 2.2 16 7-22 34-49 (133)
234 2ghf_A ZHX1, zinc fingers and 27.1 31 0.0011 18.9 1.6 11 10-20 51-61 (102)
235 2ebt_A Krueppel-like factor 5; 26.9 17 0.00056 18.2 0.4 11 10-20 76-86 (100)
236 2wbt_A B-129; zinc finger; 2.7 26.4 29 0.001 18.3 1.4 11 10-20 75-85 (129)
237 3odc_A Poly [ADP-ribose] polym 26.1 17 0.00059 21.1 0.4 18 11-28 21-38 (111)
238 2ebv_A Nuclear pore complex pr 25.7 13 0.00044 19.8 -0.2 13 5-17 27-39 (57)
239 2jp9_A Wilms tumor 1; DNA bind 25.6 32 0.0011 17.6 1.4 11 10-20 67-77 (119)
240 2ent_A Krueppel-like factor 15 24.9 36 0.0012 14.7 1.3 11 10-20 13-25 (48)
241 1pft_A TFIIB, PFTFIIBN; N-term 24.8 22 0.00076 17.2 0.6 14 7-20 22-35 (50)
242 1x6f_A Zinc finger protein 462 23.7 36 0.0012 17.9 1.4 13 9-21 25-37 (88)
243 3gj8_B Nuclear pore complex pr 23.3 17 0.00059 20.1 0.0 12 7-18 6-17 (92)
244 1ubd_C Protein (YY1 zinc finge 22.1 40 0.0014 17.4 1.4 11 10-20 35-45 (124)
245 2jrp_A Putative cytoplasmic pr 21.8 46 0.0016 18.7 1.6 20 8-27 17-36 (81)
246 3gj3_B Nuclear pore complex pr 21.7 28 0.00095 16.4 0.6 13 6-18 4-16 (33)
247 1mzb_A Ferric uptake regulatio 21.5 38 0.0013 19.1 1.2 11 10-20 92-102 (136)
248 2ee8_A Protein ODD-skipped-rel 21.4 24 0.00083 17.8 0.4 12 9-20 17-28 (106)
249 2lt7_A Transcriptional regulat 21.3 38 0.0013 19.0 1.2 11 10-20 79-89 (133)
250 3qt1_I DNA-directed RNA polyme 21.2 23 0.00077 21.2 0.2 16 7-22 44-59 (133)
251 3eyy_A Putative iron uptake re 20.6 41 0.0014 19.3 1.3 11 10-20 91-101 (145)
252 1tfi_A Transcriptional elongat 20.5 57 0.002 16.3 1.7 11 9-19 37-47 (50)
253 2j7j_A Transcription factor II 20.4 48 0.0016 15.7 1.3 11 10-20 2-14 (85)
254 3ehe_A UDP-glucose 4-epimerase 20.4 96 0.0033 18.6 3.0 23 24-46 282-304 (313)
No 1
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=99.93 E-value=7.2e-27 Score=139.65 Aligned_cols=47 Identities=77% Similarity=1.121 Sum_probs=45.1
Q ss_pred CceeeEEEEEeeCCCCeeEEcccccccccHHHHHHHHHHHHHhhhhC
Q 040416 1 YAVRKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTES 47 (47)
Q Consensus 1 ~~~R~avGIW~C~~C~~~~AGGAy~~~T~~a~tvk~~irrl~e~~e~ 47 (47)
.|+|.++|||+|++||++||||||+|+||++.+|+++|+||+|++|.
T Consensus 46 ~vkR~a~GIW~C~~Cg~~~AGGAy~~~T~~~~tv~~~irrl~e~~~~ 92 (92)
T 3iz5_m 46 AVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92 (92)
T ss_dssp CBEEEETTEEECSSSCCEEECCSSSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred eeEecCcceEEcCCCCCEEeCCcccCCCcHHHHHHHHHHHHHHhhcC
Confidence 37999999999999999999999999999999999999999999874
No 2
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=99.93 E-value=8.6e-27 Score=139.39 Aligned_cols=46 Identities=52% Similarity=0.804 Sum_probs=44.7
Q ss_pred ceeeEEEEEeeCCCCeeEEcccccccccHHHHHHHHHHHHHhhhhC
Q 040416 2 AVRKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTES 47 (47)
Q Consensus 2 ~~R~avGIW~C~~C~~~~AGGAy~~~T~~a~tvk~~irrl~e~~e~ 47 (47)
|+|.++|||+|++|+++||||||+|+||++.+|+++|+||+|++|.
T Consensus 47 vkR~a~GIW~C~~C~~~~AGGAy~~~T~~~~tv~~~irrl~e~~~~ 92 (92)
T 3izc_m 47 VKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRSTIRRLREMVEA 92 (92)
T ss_dssp CEEEETTEEECTTTCCEEECCSSSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred eeecccceEEcCCCCCEEeCCcccCCCcHHHHHHHHHHHHHHhhcC
Confidence 7999999999999999999999999999999999999999999874
No 3
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=99.93 E-value=8.8e-27 Score=141.77 Aligned_cols=46 Identities=48% Similarity=0.788 Sum_probs=44.5
Q ss_pred ceeeEEEEEeeCCCCeeEEcccccccccHHHHHHHHHHHHHhhhhC
Q 040416 2 AVRKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTES 47 (47)
Q Consensus 2 ~~R~avGIW~C~~C~~~~AGGAy~~~T~~a~tvk~~irrl~e~~e~ 47 (47)
|+|.++|||+|++||++||||||+|+||++.+|+++|+||+|++|+
T Consensus 47 vKR~a~GIW~C~kCg~~~AGGAy~~~T~~a~tv~~~irrl~e~~~~ 92 (103)
T 4a17_Y 47 VKRAAVGIWKCKPCKKIIAGGAWELTTPPAVTAKTTMNRLKKLQEE 92 (103)
T ss_dssp EEEEETTEEEETTTTEEEECCSSCSSCHHHHHHHHHHHHHHHHHHH
T ss_pred eeecCcceEEcCCCCCEEeCCcccCCCcHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999873
No 4
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=99.88 E-value=3.9e-24 Score=132.07 Aligned_cols=46 Identities=28% Similarity=0.476 Sum_probs=35.5
Q ss_pred ceeeEEEEEeeCCCCeeEEcccccccccHHHHHHHHHHHHHhhhhC
Q 040416 2 AVRKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTES 47 (47)
Q Consensus 2 ~~R~avGIW~C~~C~~~~AGGAy~~~T~~a~tvk~~irrl~e~~e~ 47 (47)
|+|.++|||+|++|+++||||||+|+||++.+++++|+||+|++|+
T Consensus 71 vKR~avGIW~C~~Cgk~fAGGAy~~~T~~~~t~~~~irrl~e~~~~ 116 (116)
T 3cc2_Z 71 VDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRRSIRAALSEDEE 116 (116)
T ss_dssp EEEEETTEEEETTTCCEEECCSSSSSCHHHHHHHHC----------
T ss_pred eEecCceeEECCCCCCEEECCCcccccchhhhHHHHHHHHHHhccC
Confidence 7899999999999999999999999999999999999999999875
No 5
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=99.87 E-value=3e-23 Score=121.04 Aligned_cols=46 Identities=28% Similarity=0.476 Sum_probs=35.2
Q ss_pred ceeeEEEEEeeCCCCeeEEcccccccccHHHHHHHHHHHHHhhhhC
Q 040416 2 AVRKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTES 47 (47)
Q Consensus 2 ~~R~avGIW~C~~C~~~~AGGAy~~~T~~a~tvk~~irrl~e~~e~ 47 (47)
+.|.++|||+|++||++||||||+|+||++.+++++|+||+|++|+
T Consensus 38 v~r~atGiW~C~~Cg~~~aggay~~~t~~~~~~~~~i~r~~~~~~~ 83 (83)
T 1vq8_Z 38 VDRQGTGIWQCSYCDYKFTGGSYKPETPGGKTVRRSIRAALSEDEE 83 (83)
T ss_dssp EEEEETTEEEETTTCCEEECCSSSSSCHHHHHHHHC----------
T ss_pred eeccCCCeEECCCCCCEecCCEecccchHHHHHHHHHHHHHHhccC
Confidence 6899999999999999999999999999999999999999999875
No 6
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=99.81 E-value=2.8e-21 Score=113.66 Aligned_cols=37 Identities=30% Similarity=0.506 Sum_probs=35.4
Q ss_pred ceeeEEEEEeeCCCCeeEEcccccccccHHHHHHHHH
Q 040416 2 AVRKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVTI 38 (47)
Q Consensus 2 ~~R~avGIW~C~~C~~~~AGGAy~~~T~~a~tvk~~i 38 (47)
|+|.++|||+|++||++||||||+|+||+++++.++|
T Consensus 46 vkR~a~GIW~C~kCg~~~AGGAy~~~T~~~~t~~r~~ 82 (83)
T 3j21_i 46 VKRISTGIWQCQKCGATFAGGAYLPVTPAGKAVRRIT 82 (83)
T ss_dssp EEEEETTEEEETTTCCEEECCSSSSSCHHHHHHHHSC
T ss_pred eEecCcCeEEcCCCCCEEeCCccccCccHhhhhhhcc
Confidence 7999999999999999999999999999999998865
No 7
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=99.81 E-value=5.4e-22 Score=114.28 Aligned_cols=36 Identities=47% Similarity=0.756 Sum_probs=34.4
Q ss_pred ceeeEEEEEeeCCCCeeEEcccccccccHHHHHHHH
Q 040416 2 AVRKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARVT 37 (47)
Q Consensus 2 ~~R~avGIW~C~~C~~~~AGGAy~~~T~~a~tvk~~ 37 (47)
|+|.++|||+|++||++||||||+|+||++.+|+++
T Consensus 37 vkR~a~GIW~C~~C~~~~AGGAy~~~T~~~~tv~s~ 72 (72)
T 3jyw_9 37 VKRGAAGIWTCSCCKKTVAGGAYTVSTAAAATVRST 72 (72)
T ss_dssp BSBCSSSCBCCSSSCCCCCCSSSSSCCHHHHHHTTC
T ss_pred eEecCCCeEECCCCCCEEeCCccccCCccceeeecC
Confidence 799999999999999999999999999999999863
No 8
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=99.78 E-value=1.7e-20 Score=107.95 Aligned_cols=35 Identities=29% Similarity=0.415 Sum_probs=33.5
Q ss_pred ceeeEEEEEeeCCCCeeEEcccccccccHHHHHHH
Q 040416 2 AVRKAVGIWGCKDSSKVKAGGAYTLNIGSAVTARV 36 (47)
Q Consensus 2 ~~R~avGIW~C~~C~~~~AGGAy~~~T~~a~tvk~ 36 (47)
|+|.++|||+|++|+++||||||+|+||++.++++
T Consensus 38 vkR~a~GIW~C~~C~~~~AGGAy~~~T~~~~t~~~ 72 (73)
T 1ffk_W 38 LKRASTSIWVCGHCGYKIAGGAYTPETVAGKAVMK 72 (73)
T ss_pred eEEEEeEEEECCCCCcEEECCCccccccceEEEec
Confidence 78999999999999999999999999999999875
No 9
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=96.93 E-value=8.5e-05 Score=39.87 Aligned_cols=15 Identities=13% Similarity=0.244 Sum_probs=13.6
Q ss_pred eeEEEEEeeCCCCee
Q 040416 4 RKAVGIWGCKDSSKV 18 (47)
Q Consensus 4 R~avGIW~C~~C~~~ 18 (47)
|.++|||+|++||++
T Consensus 23 ~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 23 TNPWGAKKCRKCGYK 37 (51)
T ss_dssp EECTTCSSCSSSSSC
T ss_pred cCCCCceecCCCCCc
Confidence 578999999999987
No 10
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=83.45 E-value=0.59 Score=18.61 Aligned_cols=11 Identities=9% Similarity=0.338 Sum_probs=9.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvh_A 4 FSCSLCPQRSR 14 (27)
T ss_dssp EECSSSSCEES
T ss_pred ccCCCcChhhC
Confidence 68999999885
No 11
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=80.87 E-value=0.79 Score=27.47 Aligned_cols=17 Identities=6% Similarity=0.163 Sum_probs=14.8
Q ss_pred EEEEeeCCCCeeEEccc
Q 040416 7 VGIWGCKDSSKVKAGGA 23 (47)
Q Consensus 7 vGIW~C~~C~~~~AGGA 23 (47)
-+.|.|..||+.|.+..
T Consensus 68 p~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 68 EAVFKCRNCNYEWKLKE 84 (139)
T ss_dssp CCEEEETTTCCEEEGGG
T ss_pred CCcEECCCCCCEEeccc
Confidence 46899999999999866
No 12
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=80.83 E-value=2.5 Score=22.58 Aligned_cols=34 Identities=6% Similarity=0.061 Sum_probs=23.1
Q ss_pred EEEEeeCCCCeeEEcccccccccHHHHHHHHHHHHHhhhh
Q 040416 7 VGIWGCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQTE 46 (47)
Q Consensus 7 vGIW~C~~C~~~~AGGAy~~~T~~a~tvk~~irrl~e~~e 46 (47)
+=-|.|..||..+.. ...+.-+...+..|+...+
T Consensus 34 Vp~~~C~~CGE~~~~------~e~~~~~~~~~~~f~~~vd 67 (78)
T 3ga8_A 34 IHGLYCVHCEESIMN------KEESDAFMAQVKAFRASVN 67 (78)
T ss_dssp EEEEEETTTCCEECC------HHHHHHHHHHHHHHHHHHH
T ss_pred ceeEECCCCCCEEEC------HHHHHHHHHHHHHHHHHHh
Confidence 445999999998754 4455556666666666543
No 13
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=78.67 E-value=1.1 Score=17.59 Aligned_cols=11 Identities=18% Similarity=0.444 Sum_probs=9.4
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 2m0f_A 3 LKCRECGKQFT 13 (29)
T ss_dssp EECTTTSCEES
T ss_pred ccCCCCCCccC
Confidence 68999999875
No 14
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=78.36 E-value=1.3 Score=17.74 Aligned_cols=11 Identities=9% Similarity=0.114 Sum_probs=9.4
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 4 ~~C~~C~k~f~ 14 (27)
T 2kvg_A 4 YRCPLCRAGCP 14 (27)
T ss_dssp EEETTTTEEES
T ss_pred cCCCCCCcccC
Confidence 57999999885
No 15
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=78.18 E-value=1.1 Score=17.69 Aligned_cols=11 Identities=18% Similarity=0.386 Sum_probs=9.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 4 ~~C~~C~k~f~ 14 (28)
T 2kvf_A 4 YSCSVCGKRFS 14 (28)
T ss_dssp EECSSSCCEES
T ss_pred ccCCCCCcccC
Confidence 57999999885
No 16
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=78.04 E-value=2 Score=26.52 Aligned_cols=19 Identities=26% Similarity=0.754 Sum_probs=15.3
Q ss_pred eeeEEEEEeeCCCCeeEEc
Q 040416 3 VRKAVGIWGCKDSSKVKAG 21 (47)
Q Consensus 3 ~R~avGIW~C~~C~~~~AG 21 (47)
+|...-+|.|.-||+++-|
T Consensus 149 ~~~~~~~~~C~~CG~~~~g 167 (191)
T 1lko_A 149 LREQATKWRCRNCGYVHEG 167 (191)
T ss_dssp EEEEEEEEEETTTCCEEEE
T ss_pred ccCCCceEEECCCCCEeeC
Confidence 3455569999999999985
No 17
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=77.51 E-value=1.2 Score=17.50 Aligned_cols=11 Identities=9% Similarity=0.374 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 4 ~~C~~C~~~f~ 14 (30)
T 2m0d_A 4 YQCDYCGRSFS 14 (30)
T ss_dssp EECTTTCCEES
T ss_pred ccCCCCCcccC
Confidence 67999999875
No 18
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.91 E-value=1.4 Score=18.98 Aligned_cols=13 Identities=8% Similarity=0.268 Sum_probs=10.6
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-..|..|++.|.-
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elm_A 9 LYYCSQCHYSSIT 21 (37)
T ss_dssp EEECSSSSCEEEC
T ss_pred CeECCCCCcccCC
Confidence 3789999999863
No 19
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=75.51 E-value=1.4 Score=18.21 Aligned_cols=11 Identities=18% Similarity=0.129 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 8 ~~C~~C~k~f~ 18 (35)
T 2elx_A 8 YVCALCLKKFV 18 (35)
T ss_dssp EECSSSCCEES
T ss_pred eECCCCcchhC
Confidence 78999999885
No 20
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=75.46 E-value=1.1 Score=27.48 Aligned_cols=16 Identities=13% Similarity=0.407 Sum_probs=12.9
Q ss_pred EEEEEeeCCCCeeEEc
Q 040416 6 AVGIWGCKDSSKVKAG 21 (47)
Q Consensus 6 avGIW~C~~C~~~~AG 21 (47)
.-|.|.|.+|++.+.-
T Consensus 59 ~~g~~~CekC~~~~~~ 74 (181)
T 1l1o_C 59 QNGLYRCEKCDTEFPN 74 (181)
T ss_dssp TTTEEEETTTTEEESS
T ss_pred CCCeEECCCCCCcCCC
Confidence 4488999999988743
No 21
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=76.82 E-value=0.61 Score=18.39 Aligned_cols=12 Identities=17% Similarity=0.299 Sum_probs=9.6
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
..|..|++.|.-
T Consensus 3 ~~C~~C~k~f~~ 14 (26)
T 2lvu_A 3 YVCERCGKRFVQ 14 (26)
Confidence 579999998864
No 22
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=74.21 E-value=1.6 Score=18.19 Aligned_cols=11 Identities=9% Similarity=0.190 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 8 ~~C~~C~k~f~ 18 (35)
T 1srk_A 8 FVCRICLSAFT 18 (35)
T ss_dssp EECSSSCCEES
T ss_pred eeCCCCCcccC
Confidence 78999999885
No 23
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.67 E-value=1.7 Score=18.34 Aligned_cols=12 Identities=33% Similarity=0.564 Sum_probs=10.2
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2els_A 9 IFTCEYCNKVFK 20 (36)
T ss_dssp CEECTTTCCEES
T ss_pred CEECCCCCceeC
Confidence 378999999985
No 24
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=73.22 E-value=1.7 Score=24.90 Aligned_cols=22 Identities=27% Similarity=0.191 Sum_probs=16.8
Q ss_pred eeEEEEEeeCCCCeeEEccccc
Q 040416 4 RKAVGIWGCKDSSKVKAGGAYT 25 (47)
Q Consensus 4 R~avGIW~C~~C~~~~AGGAy~ 25 (47)
+.--+.|.|..||+.|....+.
T Consensus 68 ~~~p~~~~C~~CG~~~e~~~~~ 89 (119)
T 2kdx_A 68 VDEKVELECKDCSHVFKPNALD 89 (119)
T ss_dssp EEECCEEECSSSSCEECSCCST
T ss_pred EeccceEEcCCCCCEEeCCCCC
Confidence 3445789999999999875543
No 25
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.18 E-value=1.8 Score=18.35 Aligned_cols=13 Identities=8% Similarity=-0.092 Sum_probs=10.5
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-..|..|++.|.-
T Consensus 9 ~~~C~~C~k~f~~ 21 (37)
T 2elp_A 9 AMKCPYCDFYFMK 21 (37)
T ss_dssp CEECSSSSCEECS
T ss_pred CeECCCCChhhcc
Confidence 3789999999863
No 26
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=72.05 E-value=1 Score=17.62 Aligned_cols=12 Identities=8% Similarity=0.207 Sum_probs=9.2
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
..|..|++.|.-
T Consensus 2 ~~C~~C~k~f~~ 13 (27)
T 1znf_A 2 YKCGLCERSFVE 13 (27)
T ss_dssp CBCSSSCCBCSS
T ss_pred ccCCCCCCcCCC
Confidence 479999998753
No 27
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=71.85 E-value=2.1 Score=16.80 Aligned_cols=11 Identities=18% Similarity=0.468 Sum_probs=9.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 1rik_A 3 FACPECPKRFM 13 (29)
T ss_dssp EECSSSSCEES
T ss_pred ccCCCCCchhC
Confidence 47999999885
No 28
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=71.48 E-value=0.87 Score=17.81 Aligned_cols=11 Identities=18% Similarity=0.241 Sum_probs=8.8
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 2m0e_A 3 HKCPHCDKKFN 13 (29)
T ss_dssp CCCSSCCCCCC
T ss_pred CcCCCCCcccC
Confidence 57999998775
No 29
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.07 E-value=2.1 Score=17.97 Aligned_cols=12 Identities=8% Similarity=0.149 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elq_A 9 PFKCSLCEYATR 20 (36)
T ss_dssp SEECSSSSCEES
T ss_pred CccCCCCCchhC
Confidence 378999999985
No 30
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.32 E-value=2.3 Score=17.72 Aligned_cols=12 Identities=25% Similarity=0.418 Sum_probs=10.0
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-..|..|++.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elt_A 9 PYKCPQCSYASA 20 (36)
T ss_dssp SEECSSSSCEES
T ss_pred CCCCCCCCcccC
Confidence 368999999885
No 31
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.09 E-value=1.3 Score=18.73 Aligned_cols=11 Identities=18% Similarity=0.389 Sum_probs=9.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 10 ~~C~~C~k~f~ 20 (37)
T 2elo_A 10 YSCPVCEKSFS 20 (37)
T ss_dssp CEETTTTEECS
T ss_pred cCCCCCCCccC
Confidence 68999999875
No 32
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=69.21 E-value=2.4 Score=18.45 Aligned_cols=12 Identities=8% Similarity=0.224 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 11 ~~~C~~C~k~f~ 22 (42)
T 2en2_A 11 PYKCETCGARFV 22 (42)
T ss_dssp SEECTTTCCEES
T ss_pred CEeCCCcChhhC
Confidence 378999999885
No 33
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=69.13 E-value=2.5 Score=26.57 Aligned_cols=14 Identities=14% Similarity=0.242 Sum_probs=12.7
Q ss_pred EEEeeCCCCeeEEc
Q 040416 8 GIWGCKDSSKVKAG 21 (47)
Q Consensus 8 GIW~C~~C~~~~AG 21 (47)
-+|.|.-||++.-|
T Consensus 170 ~~~~C~~CG~i~~g 183 (202)
T 1yuz_A 170 KFHLCPICGYIHKG 183 (202)
T ss_dssp CEEECSSSCCEEES
T ss_pred cEEEECCCCCEEcC
Confidence 48999999999987
No 34
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=68.92 E-value=1.3 Score=17.43 Aligned_cols=11 Identities=18% Similarity=0.413 Sum_probs=9.0
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 1ard_A 3 FVCEVCTRAFA 13 (29)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCcccC
Confidence 57999999875
No 35
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=68.33 E-value=2.4 Score=18.92 Aligned_cols=12 Identities=17% Similarity=0.282 Sum_probs=10.2
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eoz_A 13 YSCNVCGKAFVL 24 (46)
T ss_dssp EEETTTTEEESS
T ss_pred eECcccChhhCC
Confidence 789999999863
No 36
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=68.06 E-value=2.6 Score=18.22 Aligned_cols=12 Identities=17% Similarity=0.235 Sum_probs=10.0
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 11 ~~~C~~C~k~f~ 22 (42)
T 2epc_A 11 PYLCGQCGKSFT 22 (42)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCcccC
Confidence 378999999885
No 37
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.98 E-value=1.4 Score=18.50 Aligned_cols=12 Identities=17% Similarity=0.044 Sum_probs=9.7
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elr_A 9 THLCDMCGKKFK 20 (36)
T ss_dssp SCBCTTTCCBCS
T ss_pred CeecCcCCCCcC
Confidence 368999999875
No 38
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=67.77 E-value=1.2 Score=17.49 Aligned_cols=12 Identities=17% Similarity=0.304 Sum_probs=9.4
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 3 ~~C~~C~k~f~~ 14 (30)
T 1klr_A 3 YQCQYCEFRSAD 14 (30)
T ss_dssp CCCSSSSCCCSC
T ss_pred ccCCCCCCccCC
Confidence 579999998753
No 39
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=67.43 E-value=1.5 Score=24.61 Aligned_cols=36 Identities=19% Similarity=0.379 Sum_probs=22.3
Q ss_pred EEEEeeCCCCeeEEccccccccc-HHHHHHHHHHHHHhh
Q 040416 7 VGIWGCKDSSKVKAGGAYTLNIG-SAVTARVTIRRLREQ 44 (47)
Q Consensus 7 vGIW~C~~C~~~~AGGAy~~~T~-~a~tvk~~irrl~e~ 44 (47)
-|+|+|-.||+ .|.+..+--. -+.++..|++.|.+.
T Consensus 56 k~~~~Cf~cg~--gGd~i~fv~~~~~~sf~eA~~~La~~ 92 (103)
T 1d0q_A 56 KQIFHCFGCGA--GGNAFTFLMDIEGIPFVEAAKRLAAK 92 (103)
T ss_dssp TTEEEETTTCC--EECHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred CCEEEECCCCC--CCCHHHHHHHHhCCCHHHHHHHHHHH
Confidence 47899999995 4555543221 233466677776653
No 40
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.13 E-value=2.8 Score=17.53 Aligned_cols=12 Identities=8% Similarity=0.360 Sum_probs=9.9
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-..|..|++.|.
T Consensus 9 ~~~C~~C~k~f~ 20 (36)
T 2elv_A 9 LYDCHICERKFK 20 (36)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCCccC
Confidence 368999999885
No 41
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=66.79 E-value=1.5 Score=18.58 Aligned_cols=11 Identities=18% Similarity=0.555 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 12 ~~C~~C~k~f~ 22 (37)
T 1p7a_A 12 FQCPDCDRSFS 22 (37)
T ss_dssp BCCTTTCCCBS
T ss_pred ccCCCCCcccC
Confidence 68999999875
No 42
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.71 E-value=2.4 Score=18.94 Aligned_cols=12 Identities=25% Similarity=0.542 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2ytp_A 13 YECSECGKAFAR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCcCCcccCC
Confidence 789999999853
No 43
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=69.87 E-value=1.2 Score=17.66 Aligned_cols=12 Identities=17% Similarity=0.315 Sum_probs=9.6
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
..|..|++.|.-
T Consensus 4 ~~C~~C~k~f~~ 15 (30)
T 2lvr_A 4 YVCIHCQRQFAD 15 (30)
Confidence 579999998763
No 44
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.97 E-value=3.4 Score=18.13 Aligned_cols=13 Identities=15% Similarity=0.457 Sum_probs=10.5
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~F~~ 24 (44)
T 2eox_A 12 SYNCNECGKAFTR 24 (44)
T ss_dssp CEEETTTTEEESS
T ss_pred CeECcccCcccCC
Confidence 3789999998853
No 45
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.83 E-value=2.6 Score=18.68 Aligned_cols=13 Identities=15% Similarity=0.248 Sum_probs=10.6
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2yts_A 12 PYICNECGKSFIQ 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CEECCCCChhhCC
Confidence 3789999999864
No 46
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=65.79 E-value=1.7 Score=17.20 Aligned_cols=11 Identities=9% Similarity=0.368 Sum_probs=8.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1paa_A 3 YACGLCNRAFT 13 (30)
T ss_dssp SBCTTTCCBCS
T ss_pred cCCcccCcccC
Confidence 46999999874
No 47
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.74 E-value=3.5 Score=18.27 Aligned_cols=11 Identities=18% Similarity=0.413 Sum_probs=9.8
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (45)
T 2epu_A 13 FECTHCGKSFR 23 (45)
T ss_dssp EEETTTTEEES
T ss_pred ccCCCCCCccC
Confidence 78999999985
No 48
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.33 E-value=2.7 Score=18.71 Aligned_cols=11 Identities=18% Similarity=0.597 Sum_probs=9.8
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2emy_A 13 YECHECGKAFS 23 (46)
T ss_dssp EECSSSCCEES
T ss_pred cCCCCCCcccC
Confidence 78999999886
No 49
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.18 E-value=3.2 Score=17.95 Aligned_cols=12 Identities=17% Similarity=0.581 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 10 ~~~C~~C~k~f~ 21 (41)
T 2ept_A 10 VYECQECGKSFR 21 (41)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCCCcC
Confidence 378999999885
No 50
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.17 E-value=2.7 Score=18.61 Aligned_cols=12 Identities=17% Similarity=0.445 Sum_probs=10.2
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ytf_A 13 FECSECQKAFNT 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred cCCCCCCcccCC
Confidence 789999998863
No 51
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=68.70 E-value=1.3 Score=17.60 Aligned_cols=12 Identities=17% Similarity=0.138 Sum_probs=9.3
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
..|..|++.|.-
T Consensus 3 ~~C~~C~k~f~~ 14 (29)
T 2lvt_A 3 CQCVMCGKAFTQ 14 (29)
Confidence 479999998753
No 52
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=64.61 E-value=2.3 Score=26.60 Aligned_cols=13 Identities=8% Similarity=0.199 Sum_probs=11.4
Q ss_pred EEEEEeeCCCCee
Q 040416 6 AVGIWGCKDSSKV 18 (47)
Q Consensus 6 avGIW~C~~C~~~ 18 (47)
.-|.|.|.+|++.
T Consensus 56 ~~g~~~CekC~~~ 68 (172)
T 3u50_C 56 HGDSFFCESCQQF 68 (172)
T ss_dssp TTTEEEETTTTEE
T ss_pred CCCeEECCCCCCC
Confidence 4589999999997
No 53
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.48 E-value=3.3 Score=18.28 Aligned_cols=13 Identities=23% Similarity=0.399 Sum_probs=10.6
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2yrj_A 12 PYRCGECGKAFAQ 24 (46)
T ss_dssp CEECSSSCCEESS
T ss_pred CeECCCCCCccCC
Confidence 3789999999863
No 54
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.29 E-value=2.9 Score=18.59 Aligned_cols=12 Identities=17% Similarity=0.504 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ep3_A 13 YRCAECGKAFTD 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCchhCC
Confidence 789999998863
No 55
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.07 E-value=3.4 Score=17.99 Aligned_cols=12 Identities=17% Similarity=0.437 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (44)
T 2eof_A 12 PYECNECQKAFN 23 (44)
T ss_dssp SEECTTTCCEES
T ss_pred CeECCCCCcccC
Confidence 378999999885
No 56
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=64.06 E-value=3.4 Score=17.71 Aligned_cols=11 Identities=9% Similarity=0.220 Sum_probs=9.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 7 ~~C~~C~k~f~ 17 (39)
T 1njq_A 7 YTCSFCKREFR 17 (39)
T ss_dssp EECTTTCCEES
T ss_pred eECCCCCcccC
Confidence 68999999885
No 57
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=63.59 E-value=3.6 Score=17.80 Aligned_cols=11 Identities=18% Similarity=0.540 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 11 ~~C~~C~k~f~ 21 (42)
T 2el5_A 11 YECSECGKAFN 21 (42)
T ss_dssp EECSSSCCEES
T ss_pred ccCCCcChhhC
Confidence 78999999885
No 58
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.31 E-value=3.5 Score=18.28 Aligned_cols=12 Identities=17% Similarity=0.324 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2ysp_A 12 PYKCEKCGKGYN 23 (46)
T ss_dssp SEEETTTTEEES
T ss_pred CeECCCCCCccC
Confidence 378999999885
No 59
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.21 E-value=3.6 Score=18.22 Aligned_cols=11 Identities=36% Similarity=0.546 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2em3_A 13 YECKVCSKAFT 23 (46)
T ss_dssp EECSSSCCEES
T ss_pred eECCCCCcccC
Confidence 78999999885
No 60
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.88 E-value=3.8 Score=17.98 Aligned_cols=11 Identities=18% Similarity=0.564 Sum_probs=9.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (44)
T 2yu5_A 13 FKCSKCDRVFT 23 (44)
T ss_dssp EECSSSSCEES
T ss_pred eECCCCCchhC
Confidence 78999999885
No 61
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=62.68 E-value=3.8 Score=18.22 Aligned_cols=12 Identities=17% Similarity=0.404 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~F~ 23 (46)
T 2emj_A 12 PFECAECGKSFS 23 (46)
T ss_dssp SEECSSSSCEES
T ss_pred CEECCCCCcccC
Confidence 378999999985
No 62
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=62.68 E-value=4.7 Score=15.56 Aligned_cols=11 Identities=9% Similarity=0.416 Sum_probs=9.2
Q ss_pred EeeC--CCCeeEE
Q 040416 10 WGCK--DSSKVKA 20 (47)
Q Consensus 10 W~C~--~C~~~~A 20 (47)
..|. .|++.|.
T Consensus 3 ~~C~~~~C~k~f~ 15 (29)
T 2ab3_A 3 YVCHFENCGRSFN 15 (29)
T ss_dssp EEECSTTTCEEES
T ss_pred CCCcCCcCcCccC
Confidence 5799 9999885
No 63
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.42 E-value=3.2 Score=18.47 Aligned_cols=13 Identities=23% Similarity=0.432 Sum_probs=10.4
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2yto_A 12 PYKCSDCGKAFTR 24 (46)
T ss_dssp CEECSSSCCEESS
T ss_pred CEECcccCCccCC
Confidence 3789999998853
No 64
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=62.32 E-value=3.3 Score=18.38 Aligned_cols=11 Identities=27% Similarity=0.694 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2ema_A 13 YKCNECGKVFS 23 (46)
T ss_dssp EECSSSCCEES
T ss_pred cCCCCCcchhC
Confidence 78999999885
No 65
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.23 E-value=3.9 Score=18.04 Aligned_cols=12 Identities=17% Similarity=0.426 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2eow_A 12 PYKCNECGKAFR 23 (46)
T ss_dssp CEECTTSCCEES
T ss_pred CeeccccCChhc
Confidence 378999999885
No 66
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.05 E-value=3.3 Score=18.37 Aligned_cols=12 Identities=17% Similarity=0.265 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emh_A 13 YICTVCGKAFTD 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred cCCCCCCchhCC
Confidence 789999998853
No 67
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.03 E-value=3.9 Score=18.10 Aligned_cols=11 Identities=18% Similarity=0.525 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2emi_A 13 YECSECGKAFI 23 (46)
T ss_dssp EECSSSCCEES
T ss_pred CCCCCCCcccC
Confidence 78999999985
No 68
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=61.92 E-value=3.7 Score=21.02 Aligned_cols=12 Identities=17% Similarity=0.637 Sum_probs=9.7
Q ss_pred EEEeeCCCCeeE
Q 040416 8 GIWGCKDSSKVK 19 (47)
Q Consensus 8 GIW~C~~C~~~~ 19 (47)
.-|.|.+||.+.
T Consensus 36 ~R~~C~kCG~t~ 47 (50)
T 3j20_Y 36 DRWACGKCGYTE 47 (50)
T ss_dssp SEEECSSSCCEE
T ss_pred CeEECCCCCCEE
Confidence 468999999875
No 69
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=61.84 E-value=3.6 Score=20.96 Aligned_cols=12 Identities=8% Similarity=0.063 Sum_probs=10.7
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
+|.|.-||+.+-
T Consensus 4 ~y~C~vCGyvyd 15 (46)
T 6rxn_A 4 KYVCNVCGYEYD 15 (46)
T ss_dssp CEEETTTCCEEC
T ss_pred EEECCCCCeEEe
Confidence 699999999886
No 70
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.67 E-value=4 Score=17.89 Aligned_cols=11 Identities=9% Similarity=0.356 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (44)
T 2emb_A 13 YECSKCQATFN 23 (44)
T ss_dssp EECTTTCCEES
T ss_pred eECCCCCCccC
Confidence 78999999985
No 71
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.66 E-value=4 Score=18.02 Aligned_cols=12 Identities=17% Similarity=0.390 Sum_probs=10.0
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
..|..|++.|.-
T Consensus 13 ~~C~~C~k~F~~ 24 (44)
T 2epv_A 13 YECNECGKAFIW 24 (44)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCcccCc
Confidence 689999999853
No 72
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.51 E-value=4.6 Score=17.84 Aligned_cols=12 Identities=17% Similarity=0.443 Sum_probs=10.2
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2en1_A 13 FKCEECGKRFTQ 24 (46)
T ss_dssp EEETTTTEEESS
T ss_pred eeCCCCCcccCC
Confidence 789999999853
No 73
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=61.41 E-value=2.4 Score=19.79 Aligned_cols=11 Identities=9% Similarity=0.156 Sum_probs=9.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|+|.|.
T Consensus 9 ~~C~~CgK~F~ 19 (36)
T 1fv5_A 9 FMCLPCGIAFS 19 (36)
T ss_dssp CEETTTTEECS
T ss_pred eECCCCCCccC
Confidence 58999999885
No 74
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.23 E-value=3.5 Score=18.20 Aligned_cols=12 Identities=17% Similarity=0.257 Sum_probs=10.0
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2epw_A 13 CKCTECGKAFCW 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCCCCccCC
Confidence 789999998853
No 75
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.02 E-value=4.2 Score=18.07 Aligned_cols=12 Identities=17% Similarity=0.445 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~F~ 23 (46)
T 2emf_A 12 HFECTECGKAFT 23 (46)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCchhC
Confidence 378999999885
No 76
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.94 E-value=4.3 Score=17.78 Aligned_cols=13 Identities=23% Similarity=0.457 Sum_probs=10.4
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 10 ~~~C~~C~k~f~~ 22 (44)
T 2emx_A 10 PFGCSCCEKAFSS 22 (44)
T ss_dssp CEECSSSSCEESS
T ss_pred CccCCCCCcccCC
Confidence 3789999998853
No 77
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=60.86 E-value=4.1 Score=18.75 Aligned_cols=11 Identities=18% Similarity=0.365 Sum_probs=9.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 8 ~~C~~C~k~F~ 18 (48)
T 3iuf_A 8 YACDICGKRYK 18 (48)
T ss_dssp EECTTTCCEES
T ss_pred EECCCcCcccC
Confidence 68999999985
No 78
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=60.65 E-value=4.1 Score=18.93 Aligned_cols=11 Identities=18% Similarity=0.030 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 25 ~~C~~C~k~f~ 35 (54)
T 1yui_A 25 ATCPICYAVIR 35 (54)
T ss_dssp EECTTTCCEES
T ss_pred ccCCCCCcccC
Confidence 78999999985
No 79
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.45 E-value=4.3 Score=17.88 Aligned_cols=11 Identities=18% Similarity=0.594 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eor_A 13 YNCEECGKAFI 23 (46)
T ss_dssp EECTTTCCEES
T ss_pred ccCCCCCCCcC
Confidence 78999999885
No 80
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=60.35 E-value=2.4 Score=25.24 Aligned_cols=10 Identities=20% Similarity=0.248 Sum_probs=9.0
Q ss_pred EeeCCCCeeE
Q 040416 10 WGCKDSSKVK 19 (47)
Q Consensus 10 W~C~~C~~~~ 19 (47)
-.|++||++|
T Consensus 68 ~~C~~CG~~F 77 (105)
T 2gmg_A 68 AQCRKCGFVF 77 (105)
T ss_dssp CBBTTTCCBC
T ss_pred cChhhCcCee
Confidence 4799999999
No 81
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.33 E-value=4.4 Score=17.93 Aligned_cols=11 Identities=18% Similarity=0.446 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2en3_A 13 FQCKECGMNFS 23 (46)
T ss_dssp EECSSSCCEES
T ss_pred eeCcccChhhC
Confidence 78999999985
No 82
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.09 E-value=4.4 Score=17.98 Aligned_cols=12 Identities=25% Similarity=0.479 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2em2_A 12 PFKCKECGKAFR 23 (46)
T ss_dssp SEECSSSCCEES
T ss_pred CEECCcCCchhC
Confidence 378999999885
No 83
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.04 E-value=3.8 Score=18.15 Aligned_cols=13 Identities=15% Similarity=0.192 Sum_probs=10.5
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ep2_A 12 PYECSICGKSFTK 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CcCCCCCCcccCC
Confidence 3789999998863
No 84
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.88 E-value=3.8 Score=18.15 Aligned_cols=12 Identities=25% Similarity=0.556 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2eq0_A 13 YKCHECGKVFRR 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCCCchhCC
Confidence 789999998863
No 85
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.66 E-value=3.9 Score=18.11 Aligned_cols=12 Identities=25% Similarity=0.551 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2ytk_A 12 PYKCNECGKVFT 23 (46)
T ss_dssp SEECSSSCCEES
T ss_pred CEeCCcCCCccC
Confidence 378999999885
No 86
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.40 E-value=3.9 Score=18.03 Aligned_cols=12 Identities=17% Similarity=0.210 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2en8_A 13 HTCDECGKNFCY 24 (46)
T ss_dssp EECTTTCCEESS
T ss_pred eECCCcCcccCC
Confidence 789999999853
No 87
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.24 E-value=4 Score=18.00 Aligned_cols=13 Identities=15% Similarity=0.105 Sum_probs=10.6
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eme_A 12 PYVCDYCGKAFGL 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCChhhCC
Confidence 3789999999864
No 88
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=59.11 E-value=5 Score=24.62 Aligned_cols=14 Identities=7% Similarity=0.166 Sum_probs=12.2
Q ss_pred EEEeeCCCCeeEEc
Q 040416 8 GIWGCKDSSKVKAG 21 (47)
Q Consensus 8 GIW~C~~C~~~~AG 21 (47)
-+|.|.-||++.-|
T Consensus 137 ~~~~C~~CG~i~~~ 150 (170)
T 3pwf_A 137 KVYICPICGYTAVD 150 (170)
T ss_dssp CEEECTTTCCEEES
T ss_pred CeeEeCCCCCeeCC
Confidence 47999999999874
No 89
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.11 E-value=3.3 Score=18.12 Aligned_cols=11 Identities=27% Similarity=0.594 Sum_probs=9.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (44)
T 2eoj_A 13 YECCECGKVFS 23 (44)
T ss_dssp CEETTTTEECS
T ss_pred eeCCCCCCccC
Confidence 68999999875
No 90
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.11 E-value=4 Score=18.06 Aligned_cols=13 Identities=15% Similarity=0.261 Sum_probs=10.4
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2em7_A 12 PYKCEECGKGFIC 24 (46)
T ss_dssp SEECSSSCCEESC
T ss_pred CccCCCccchhCC
Confidence 3789999998853
No 91
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.05 E-value=4.7 Score=17.80 Aligned_cols=13 Identities=15% Similarity=0.192 Sum_probs=10.4
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytj_A 12 PYICAECGKAFTI 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCChhhCC
Confidence 3789999998853
No 92
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=59.03 E-value=1.8 Score=18.28 Aligned_cols=11 Identities=18% Similarity=0.468 Sum_probs=8.9
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 3 ~~C~~C~k~F~ 13 (33)
T 1rim_A 3 FACPECPKRFM 13 (33)
T ss_dssp CCCSSSCCCCS
T ss_pred ccCCCCCchhC
Confidence 46999999875
No 93
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.97 E-value=4 Score=18.04 Aligned_cols=12 Identities=25% Similarity=0.595 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2yu8_A 13 YKCNECGKVFTQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCcCCchhCC
Confidence 789999998864
No 94
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=58.74 E-value=4.8 Score=17.69 Aligned_cols=12 Identities=25% Similarity=0.504 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2em9_A 12 PYNCKECGKSFR 23 (46)
T ss_dssp SEECSSSCCEES
T ss_pred CeECCccccccC
Confidence 378999999885
No 95
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.66 E-value=4.8 Score=17.78 Aligned_cols=13 Identities=15% Similarity=0.317 Sum_probs=10.5
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytg_A 12 PFKCGECGKSYNQ 24 (46)
T ss_dssp SEECTTTCCEESS
T ss_pred CeECCCCCcccCC
Confidence 3789999999863
No 96
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.61 E-value=3.1 Score=18.38 Aligned_cols=11 Identities=18% Similarity=0.549 Sum_probs=9.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eq3_A 13 YECNQCGKAFS 23 (46)
T ss_dssp SEETTTTEECS
T ss_pred eECCCCChhhC
Confidence 68999999885
No 97
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.58 E-value=4.9 Score=17.83 Aligned_cols=11 Identities=18% Similarity=0.504 Sum_probs=9.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eoy_A 13 FKCNKCEKTFS 23 (46)
T ss_dssp EECSSSCCEES
T ss_pred EECcCCCCcCC
Confidence 78999999885
No 98
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.27 E-value=5 Score=17.72 Aligned_cols=13 Identities=15% Similarity=0.248 Sum_probs=10.4
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2eml_A 12 PYECSVCGKAFSH 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeeCCCcCCccCC
Confidence 3789999998853
No 99
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.74 E-value=5.1 Score=17.67 Aligned_cols=12 Identities=25% Similarity=0.551 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2ene_A 13 YKCNECGKVFRH 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCCCCchhCC
Confidence 789999999853
No 100
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.51 E-value=5.2 Score=17.65 Aligned_cols=11 Identities=18% Similarity=0.314 Sum_probs=9.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2ep0_A 13 YKCDVCHKSFR 23 (46)
T ss_dssp EECSSSCCEES
T ss_pred eeCcccCcccC
Confidence 78999999885
No 101
>3u5c_f 40S ribosomal protein S31; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_f
Probab=57.48 E-value=3.2 Score=25.09 Aligned_cols=11 Identities=18% Similarity=0.217 Sum_probs=9.1
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
|+|.+|+.|+.
T Consensus 139 ~~cgkc~~t~~ 149 (152)
T 3u5c_f 139 LYCGKCHSVYK 149 (152)
T ss_dssp EEESSSSSCCE
T ss_pred cccCCCceEEE
Confidence 88999998863
No 102
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.41 E-value=5.2 Score=17.71 Aligned_cols=11 Identities=18% Similarity=0.471 Sum_probs=9.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2em4_A 13 YECIECGKAFK 23 (46)
T ss_dssp EECSSSCCEES
T ss_pred cCCCCCCCccC
Confidence 68999999886
No 103
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.25 E-value=6.1 Score=17.41 Aligned_cols=13 Identities=23% Similarity=0.606 Sum_probs=10.4
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-..|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2en6_A 12 PYGCNECGKTFSQ 24 (46)
T ss_dssp CEEETTTTEEESS
T ss_pred CeECCCCCcccCc
Confidence 3789999998853
No 104
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.24 E-value=5.3 Score=17.70 Aligned_cols=12 Identities=25% Similarity=0.650 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2eoo_A 13 YGCNECGKNFGR 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred EEccccCcccCC
Confidence 789999998853
No 105
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=57.20 E-value=4.3 Score=21.18 Aligned_cols=11 Identities=18% Similarity=0.860 Sum_probs=9.0
Q ss_pred EEEeeCCCCee
Q 040416 8 GIWGCKDSSKV 18 (47)
Q Consensus 8 GIW~C~~C~~~ 18 (47)
.-|+|.+|++.
T Consensus 12 D~WkC~~C~~~ 22 (46)
T 2c6a_A 12 DYWKCTSCNEM 22 (46)
T ss_dssp GCEECTTTCCE
T ss_pred ceEeccccccc
Confidence 56999999954
No 106
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=57.03 E-value=5.4 Score=17.65 Aligned_cols=12 Identities=25% Similarity=0.623 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2el6_A 13 YKCSQCEKSFSG 24 (46)
T ss_dssp EECSSSSCEESS
T ss_pred eECCCCCcccCC
Confidence 789999998853
No 107
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.02 E-value=5.4 Score=17.53 Aligned_cols=12 Identities=17% Similarity=0.299 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2emm_A 13 HKCNECGKSFIQ 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eeCCCCChhhCC
Confidence 789999999853
No 108
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.81 E-value=2.8 Score=18.12 Aligned_cols=13 Identities=15% Similarity=0.360 Sum_probs=10.2
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 11 ~~~C~~C~k~f~~ 23 (42)
T 2ytb_A 11 PYRCDQCGKAFSQ 23 (42)
T ss_dssp SBCCTTTTCCBSS
T ss_pred CeeCCCccchhCC
Confidence 3689999998753
No 109
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.76 E-value=2.4 Score=18.84 Aligned_cols=12 Identities=25% Similarity=0.595 Sum_probs=9.8
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2enf_A 13 YKCNECGKVFTQ 24 (46)
T ss_dssp CBCSSSCCBCSS
T ss_pred eECCCCCcccCC
Confidence 689999998753
No 110
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=56.44 E-value=7.2 Score=20.29 Aligned_cols=13 Identities=15% Similarity=0.388 Sum_probs=11.1
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
.|.|.-||+..-+
T Consensus 3 ~y~C~~CGyvYd~ 15 (55)
T 2v3b_B 3 KWQCVVCGFIYDE 15 (55)
T ss_dssp EEEETTTCCEEET
T ss_pred cEEeCCCCeEECC
Confidence 6999999998764
No 111
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=55.93 E-value=5.8 Score=17.40 Aligned_cols=12 Identities=25% Similarity=0.584 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
..|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2el4_A 13 YGCSQCAKTFSL 24 (46)
T ss_dssp EECSSSSCEESS
T ss_pred eECCCCCchhCC
Confidence 789999999853
No 112
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.60 E-value=5.9 Score=17.47 Aligned_cols=12 Identities=17% Similarity=0.285 Sum_probs=10.0
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-..|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2enc_A 12 PFKCEECGKGFY 23 (46)
T ss_dssp SEECSSSCCEES
T ss_pred CcCCCCCCCcCC
Confidence 378999999885
No 113
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.41 E-value=5.9 Score=17.45 Aligned_cols=11 Identities=18% Similarity=0.522 Sum_probs=9.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2emp_A 13 YMCNECGKAFS 23 (46)
T ss_dssp EECSSSCCEES
T ss_pred eECCCCCchhC
Confidence 78999999885
No 114
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.05 E-value=3.1 Score=18.44 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=9.4
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2emg_A 13 FICSECGKVFT 23 (46)
T ss_dssp CBCTTTCCBCS
T ss_pred EECCccCcccC
Confidence 68999999875
No 115
>4gop_C Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=55.04 E-value=4 Score=27.67 Aligned_cols=18 Identities=22% Similarity=0.553 Sum_probs=12.8
Q ss_pred EEEEeeCCCCeeEEcccc
Q 040416 7 VGIWGCKDSSKVKAGGAY 24 (47)
Q Consensus 7 vGIW~C~~C~~~~AGGAy 24 (47)
-|.|.|.+|++.+.-.-|
T Consensus 325 ~g~~~C~~C~~~~~~~~~ 342 (444)
T 4gop_C 325 ENNWRCEKCDRSYATPEY 342 (444)
T ss_dssp TSCEEETTTTEEESSCEE
T ss_pred CccEECCCCCCcCccccE
Confidence 478999999987644433
No 116
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.04 E-value=5.1 Score=17.74 Aligned_cols=12 Identities=8% Similarity=0.163 Sum_probs=10.1
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2em5_A 13 HQCHECGRGFTL 24 (46)
T ss_dssp EECSSSCCEESS
T ss_pred eECCcCCCccCC
Confidence 789999999853
No 117
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.96 E-value=6.1 Score=17.48 Aligned_cols=12 Identities=17% Similarity=0.302 Sum_probs=10.0
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2em8_A 12 PYKCVECGKGYK 23 (46)
T ss_dssp SEECSSSCCEES
T ss_pred CeECcccCchhC
Confidence 378999999885
No 118
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.70 E-value=6.2 Score=17.38 Aligned_cols=13 Identities=15% Similarity=0.345 Sum_probs=10.4
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 12 ~~~C~~C~k~f~~ 24 (46)
T 2ytd_A 12 PYKCSECGKAFHR 24 (46)
T ss_dssp SEECSSSCCEESS
T ss_pred CeECCCCCCeeCC
Confidence 3789999998853
No 119
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=54.31 E-value=2.3 Score=22.47 Aligned_cols=13 Identities=15% Similarity=0.383 Sum_probs=8.8
Q ss_pred EEEeeCCCCeeEE
Q 040416 8 GIWGCKDSSKVKA 20 (47)
Q Consensus 8 GIW~C~~C~~~~A 20 (47)
.|..|-+||++|.
T Consensus 2 ~iY~C~rCg~~fs 14 (48)
T 4ayb_P 2 AVYRCGKCWKTFT 14 (48)
T ss_dssp ---CCCCTTTTCC
T ss_pred cEEEeeccCCCcc
Confidence 3788999999885
No 120
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.29 E-value=6.3 Score=17.36 Aligned_cols=12 Identities=8% Similarity=0.349 Sum_probs=10.0
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (46)
T 2yso_A 12 SHQCRECGEIFF 23 (46)
T ss_dssp CEECTTTCCEES
T ss_pred CEEccccChhhC
Confidence 378999999885
No 121
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=54.00 E-value=6.1 Score=18.63 Aligned_cols=12 Identities=33% Similarity=0.589 Sum_probs=9.3
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 10 ~~~C~~C~k~f~ 21 (66)
T 2drp_A 10 TYRCKVCSRVYT 21 (66)
T ss_dssp EEECTTTCCEES
T ss_pred ceECCCCcchhC
Confidence 478888888875
No 122
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.87 E-value=3.4 Score=18.39 Aligned_cols=11 Identities=18% Similarity=0.356 Sum_probs=9.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2em6_A 13 YKCDVCGKEFS 23 (46)
T ss_dssp CBCSSSCCBCS
T ss_pred eECCCCCcccC
Confidence 78999999875
No 123
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=53.85 E-value=5.1 Score=20.82 Aligned_cols=12 Identities=8% Similarity=0.332 Sum_probs=10.3
Q ss_pred EEEeeCCCCeeE
Q 040416 8 GIWGCKDSSKVK 19 (47)
Q Consensus 8 GIW~C~~C~~~~ 19 (47)
+-|.|.+|+++.
T Consensus 35 dr~~C~kCgyt~ 46 (55)
T 2k4x_A 35 DRYSCGRCGYTE 46 (55)
T ss_dssp SEEECTTTCCCE
T ss_pred CEEECCCCCCEE
Confidence 578999999986
No 124
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=53.69 E-value=6.5 Score=17.90 Aligned_cols=12 Identities=8% Similarity=0.055 Sum_probs=9.9
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 29 ~~~C~~C~~~f~ 40 (57)
T 1bbo_A 29 PYHCTYCNFSFK 40 (57)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCCCchhc
Confidence 378999999885
No 125
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.61 E-value=3.4 Score=17.94 Aligned_cols=12 Identities=8% Similarity=0.099 Sum_probs=9.7
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 11 ~~~C~~C~k~f~ 22 (42)
T 2eos_A 11 PYPCEICGTRFR 22 (42)
T ss_dssp CBCCSSSCCCBS
T ss_pred CEECCCCCCccC
Confidence 368999999875
No 126
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=53.49 E-value=7.5 Score=17.45 Aligned_cols=12 Identities=17% Similarity=0.218 Sum_probs=10.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (48)
T 2epr_A 12 QVACEICGKIFR 23 (48)
T ss_dssp SEEETTTTEEES
T ss_pred CeeCCCCCcccC
Confidence 478999999885
No 127
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.35 E-value=6.3 Score=19.29 Aligned_cols=11 Identities=9% Similarity=0.033 Sum_probs=8.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 8 ~~C~~C~k~f~ 18 (78)
T 2d9h_A 8 LQCEICGFTCR 18 (78)
T ss_dssp EECSSSCCEES
T ss_pred eECCCCCCeeC
Confidence 67888888774
No 128
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.31 E-value=3 Score=18.61 Aligned_cols=11 Identities=18% Similarity=0.516 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2yth_A 13 FQCEECGKRFT 23 (46)
T ss_dssp BCCSSSCCCBS
T ss_pred CCCCCCCcccC
Confidence 68999999875
No 129
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.81 E-value=3.1 Score=18.61 Aligned_cols=11 Identities=18% Similarity=0.395 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eon_A 13 YKCQVCGKAFR 23 (46)
T ss_dssp CBCSSSCCBCS
T ss_pred cCCCCCCcccC
Confidence 68999999875
No 130
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=52.72 E-value=9.2 Score=19.64 Aligned_cols=13 Identities=15% Similarity=0.176 Sum_probs=10.8
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
.|.|.-||+..-+
T Consensus 2 ~~~C~~CGyvYd~ 14 (52)
T 1yk4_A 2 KLSCKICGYIYDE 14 (52)
T ss_dssp EEEESSSSCEEET
T ss_pred cEEeCCCCeEECC
Confidence 5999999988754
No 131
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.63 E-value=3.6 Score=17.70 Aligned_cols=11 Identities=9% Similarity=0.531 Sum_probs=9.1
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 11 ~~C~~C~k~f~ 21 (42)
T 2yte_A 11 YSCAECKETFS 21 (42)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCCccC
Confidence 68999999874
No 132
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=52.61 E-value=8.9 Score=21.92 Aligned_cols=15 Identities=13% Similarity=0.279 Sum_probs=12.3
Q ss_pred EEEEeeCCCCeeEEc
Q 040416 7 VGIWGCKDSSKVKAG 21 (47)
Q Consensus 7 vGIW~C~~C~~~~AG 21 (47)
..+|.|.-||+.+-+
T Consensus 33 m~~y~C~vCGyvYD~ 47 (87)
T 1s24_A 33 YLKWICITCGHIYDE 47 (87)
T ss_dssp CCEEEETTTTEEEET
T ss_pred CceEECCCCCeEecC
Confidence 358999999998764
No 133
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=52.42 E-value=5.5 Score=18.52 Aligned_cols=11 Identities=18% Similarity=0.422 Sum_probs=9.2
Q ss_pred EEEeeCCCCee
Q 040416 8 GIWGCKDSSKV 18 (47)
Q Consensus 8 GIW~C~~C~~~ 18 (47)
|=|.|.+|+..
T Consensus 4 gDW~C~~C~~~ 14 (32)
T 2lk0_A 4 EDWLCNKCCLN 14 (32)
T ss_dssp SEEECTTTCCE
T ss_pred CCCCcCcCcCC
Confidence 67999999875
No 134
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.28 E-value=2.9 Score=18.22 Aligned_cols=12 Identities=17% Similarity=0.448 Sum_probs=9.7
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (44)
T 2en7_A 13 YVCNECGKAFRS 24 (44)
T ss_dssp SCCTTTCCCCSS
T ss_pred eECCCCCCccCC
Confidence 689999998753
No 135
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=52.16 E-value=8.6 Score=21.71 Aligned_cols=14 Identities=7% Similarity=0.162 Sum_probs=11.9
Q ss_pred EEEeeCCCCeeEEc
Q 040416 8 GIWGCKDSSKVKAG 21 (47)
Q Consensus 8 GIW~C~~C~~~~AG 21 (47)
.+|.|.-||+..-+
T Consensus 26 ~~y~C~vCGyvYD~ 39 (81)
T 2kn9_A 26 KLFRCIQCGFEYDE 39 (81)
T ss_dssp CEEEETTTCCEEET
T ss_pred ceEEeCCCCEEEcC
Confidence 47999999998764
No 136
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.12 E-value=3 Score=18.44 Aligned_cols=11 Identities=27% Similarity=0.552 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2ep1_A 13 YECSDCGKSFI 23 (46)
T ss_dssp SCCSSSCCCCS
T ss_pred cCCCCCCchhC
Confidence 68999999875
No 137
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.76 E-value=3.8 Score=18.21 Aligned_cols=11 Identities=18% Similarity=0.552 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2en9_A 13 FKCNECKKTFT 23 (46)
T ss_dssp CBCTTTCCBCS
T ss_pred EECCccCcccC
Confidence 68999999874
No 138
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=51.75 E-value=1.7 Score=18.15 Aligned_cols=11 Identities=18% Similarity=0.377 Sum_probs=8.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 46899998764
No 139
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=51.26 E-value=8.2 Score=19.02 Aligned_cols=14 Identities=7% Similarity=0.119 Sum_probs=11.5
Q ss_pred EEEeeCCCCeeEEc
Q 040416 8 GIWGCKDSSKVKAG 21 (47)
Q Consensus 8 GIW~C~~C~~~~AG 21 (47)
..+.|..||+.|.-
T Consensus 8 ~~~~C~~C~~~i~~ 21 (39)
T 2i5o_A 8 DQVPCEKCGSLVPV 21 (39)
T ss_dssp CEEECTTTCCEEEG
T ss_pred CCcccccccCcCCc
Confidence 35789999999874
No 140
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.20 E-value=3.4 Score=18.34 Aligned_cols=12 Identities=25% Similarity=0.595 Sum_probs=9.8
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2ytn_A 13 YKCNECGKVFTQ 24 (46)
T ss_dssp CBCTTTCCBCSS
T ss_pred eECCCCCCeeCC
Confidence 689999998753
No 141
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.06 E-value=2.9 Score=18.57 Aligned_cols=12 Identities=17% Similarity=0.512 Sum_probs=9.7
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eq1_A 13 YKCNECGKAFRA 24 (46)
T ss_dssp CCCTTTTCCCSS
T ss_pred eECCcCChhhCC
Confidence 689999998753
No 142
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.65 E-value=3.5 Score=18.16 Aligned_cols=12 Identities=17% Similarity=0.387 Sum_probs=9.7
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (44)
T 2eou_A 12 TSECQECGKIFR 23 (44)
T ss_dssp CCCCTTTCCCCS
T ss_pred CeECCCCCcccC
Confidence 368999999875
No 143
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.25 E-value=2.6 Score=18.76 Aligned_cols=11 Identities=27% Similarity=0.679 Sum_probs=9.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2yti_A 13 YKCNECGKVFT 23 (46)
T ss_dssp TCCSSSCCCCS
T ss_pred eECCCCCcccC
Confidence 67999999875
No 144
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.22 E-value=4.2 Score=17.92 Aligned_cols=11 Identities=18% Similarity=0.480 Sum_probs=9.4
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eop_A 13 HECRECGKSFS 23 (46)
T ss_dssp CBCTTTCCBCS
T ss_pred eeCCCCCchhC
Confidence 78999999875
No 145
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.13 E-value=4.4 Score=17.84 Aligned_cols=11 Identities=27% Similarity=0.679 Sum_probs=9.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2eoe_A 13 YKCNECGKVFT 23 (46)
T ss_dssp SEETTTTEECS
T ss_pred eECCCcChhhC
Confidence 68999999875
No 146
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=49.95 E-value=4.2 Score=17.92 Aligned_cols=12 Identities=8% Similarity=0.174 Sum_probs=9.8
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 10 ~~~C~~C~k~f~ 21 (43)
T 2yrm_A 10 AFFCNECDCRFS 21 (43)
T ss_dssp CBCCSSSCCCBS
T ss_pred CEECCCCCCeeC
Confidence 378999999875
No 147
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=49.89 E-value=4.7 Score=23.20 Aligned_cols=17 Identities=18% Similarity=0.294 Sum_probs=15.5
Q ss_pred eeCCCCeeEEccccccc
Q 040416 11 GCKDSSKVKAGGAYTLN 27 (47)
Q Consensus 11 ~C~~C~~~~AGGAy~~~ 27 (47)
+|..|-..+.||.|.|.
T Consensus 32 HCGE~feV~v~~~Wipt 48 (81)
T 3nrl_A 32 HCGECFDVKVKDVWVPV 48 (81)
T ss_dssp CTTCEEEEEETTEEEEE
T ss_pred ccccEEEEEECCEEEEE
Confidence 69999999999999874
No 148
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=49.88 E-value=7.7 Score=18.63 Aligned_cols=11 Identities=9% Similarity=0.304 Sum_probs=8.7
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 50 ~~C~~C~~~f~ 60 (73)
T 1f2i_G 50 FQCRICMRNFS 60 (73)
T ss_dssp EECTTTCCEES
T ss_pred eECCCCCchhC
Confidence 67888888774
No 149
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=49.40 E-value=9.1 Score=18.42 Aligned_cols=12 Identities=17% Similarity=0.235 Sum_probs=9.8
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-..|..|++.|.
T Consensus 14 ~~~C~~C~k~F~ 25 (62)
T 1vd4_A 14 SFKCPVCSSTFT 25 (62)
T ss_dssp EEECSSSCCEEE
T ss_pred CccCCCCCchhc
Confidence 478999999885
No 150
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=49.15 E-value=6.7 Score=23.18 Aligned_cols=20 Identities=5% Similarity=0.179 Sum_probs=16.4
Q ss_pred EEEeeCCCCeeEEccccccc
Q 040416 8 GIWGCKDSSKVKAGGAYTLN 27 (47)
Q Consensus 8 GIW~C~~C~~~~AGGAy~~~ 27 (47)
-.-.|..|+..+|++-|-|.
T Consensus 69 ~~~~C~nC~R~vaa~RFApH 88 (99)
T 3mhs_C 69 QYIHCENCGRDVSANRLAAH 88 (99)
T ss_dssp CEEECTTTCCEEEGGGHHHH
T ss_pred CeEECCCCCCCchhhhhHHH
Confidence 34689999999999988663
No 151
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.07 E-value=4.5 Score=17.96 Aligned_cols=11 Identities=18% Similarity=0.407 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2enh_A 13 YECDVCRKAFS 23 (46)
T ss_dssp CBCTTTCCBCS
T ss_pred cCCCCcCchhC
Confidence 68999999875
No 152
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=48.61 E-value=8.8 Score=17.43 Aligned_cols=12 Identities=17% Similarity=0.249 Sum_probs=9.1
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.+.|..|++.|.
T Consensus 32 ~~~C~~C~~~f~ 43 (57)
T 3uk3_C 32 PYKCEFCEYAAA 43 (57)
T ss_dssp CEECSSSSCEES
T ss_pred CcCCCCCcchhC
Confidence 378888888764
No 153
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=48.44 E-value=4.6 Score=17.91 Aligned_cols=11 Identities=18% Similarity=0.401 Sum_probs=9.4
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2ely_A 13 FKCVECGKGFS 23 (46)
T ss_dssp BCCSSSCCCBS
T ss_pred cccCccCcccC
Confidence 78999999875
No 154
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=48.03 E-value=8.8 Score=18.40 Aligned_cols=11 Identities=18% Similarity=0.196 Sum_probs=7.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 10 ~~C~~C~k~f~ 20 (70)
T 1x5w_A 10 EKCSECSYSCS 20 (70)
T ss_dssp EECSSSSCEES
T ss_pred eECCCCCcccC
Confidence 56777777764
No 155
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.98 E-value=4.1 Score=18.15 Aligned_cols=11 Identities=27% Similarity=0.419 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2eom_A 13 HRCSDCGKFFL 23 (46)
T ss_dssp CCCSSSCCCCS
T ss_pred cCCCCCCCeeC
Confidence 68999999875
No 156
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.71 E-value=4.9 Score=17.68 Aligned_cols=11 Identities=27% Similarity=0.585 Sum_probs=9.4
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eov_A 13 YKCSDCGKSFT 23 (46)
T ss_dssp CBCSSSCCBCS
T ss_pred ccCCccChhhC
Confidence 78999999875
No 157
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=47.57 E-value=8.2 Score=21.01 Aligned_cols=13 Identities=15% Similarity=0.503 Sum_probs=10.8
Q ss_pred EEEeeCCCCeeEE
Q 040416 8 GIWGCKDSSKVKA 20 (47)
Q Consensus 8 GIW~C~~C~~~~A 20 (47)
.+|.|.-||+..-
T Consensus 6 ~~y~C~vCGyiYd 18 (70)
T 1dx8_A 6 GKYECEACGYIYE 18 (70)
T ss_dssp SCEEETTTCCEEC
T ss_pred ceEEeCCCCEEEc
Confidence 4699999998865
No 158
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=47.41 E-value=6.1 Score=17.40 Aligned_cols=11 Identities=9% Similarity=0.159 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 11 ~~C~~C~k~f~ 21 (45)
T 2epq_A 11 YSCPVCGLRFK 21 (45)
T ss_dssp SEETTTTEECS
T ss_pred CcCCCCCcccC
Confidence 67999999875
No 159
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.31 E-value=3.9 Score=18.02 Aligned_cols=12 Identities=25% Similarity=0.595 Sum_probs=9.7
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~f~~ 24 (46)
T 2eq4_A 13 YNCKECGKSFSR 24 (46)
T ss_dssp CCBTTTTBCCSC
T ss_pred eECCCCCCccCc
Confidence 689999998753
No 160
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.29 E-value=4.2 Score=18.04 Aligned_cols=11 Identities=27% Similarity=0.558 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2elz_A 13 YKCEDCGKGYN 23 (46)
T ss_dssp CBCSSSCCBCS
T ss_pred eeCcccCchhC
Confidence 68999999875
No 161
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=46.91 E-value=5.4 Score=18.16 Aligned_cols=9 Identities=22% Similarity=0.604 Sum_probs=7.9
Q ss_pred eeCCCCeeE
Q 040416 11 GCKDSSKVK 19 (47)
Q Consensus 11 ~C~~C~~~~ 19 (47)
.|..|+++|
T Consensus 5 ~C~~C~k~V 13 (31)
T 1zfo_A 5 NCARCGKIV 13 (31)
T ss_dssp BCSSSCSBC
T ss_pred cCCccCCEE
Confidence 699999987
No 162
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.76 E-value=5.1 Score=17.63 Aligned_cols=11 Identities=18% Similarity=0.458 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (47)
T 2epx_A 13 YECIECGKAFI 23 (47)
T ss_dssp BCCSSSCCCBS
T ss_pred EECCccCchhC
Confidence 68999999875
No 163
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.76 E-value=3.3 Score=18.38 Aligned_cols=11 Identities=18% Similarity=0.597 Sum_probs=9.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eq2_A 13 YQCNECGKAFS 23 (46)
T ss_dssp SSCCSSCCCCS
T ss_pred eECCCCCcccC
Confidence 67999999875
No 164
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.72 E-value=4.4 Score=17.97 Aligned_cols=11 Identities=18% Similarity=0.459 Sum_probs=9.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2emz_A 13 FKCNECGKGFG 23 (46)
T ss_dssp CCCSSSCCCCS
T ss_pred eECCCCCcccC
Confidence 68999999875
No 165
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=46.61 E-value=7.9 Score=20.73 Aligned_cols=10 Identities=30% Similarity=0.943 Sum_probs=8.3
Q ss_pred EEeeCCCCee
Q 040416 9 IWGCKDSSKV 18 (47)
Q Consensus 9 IW~C~~C~~~ 18 (47)
.|+|.+|++.
T Consensus 11 ~WkC~~C~k~ 20 (53)
T 2cr8_A 11 EWQCTECKKF 20 (53)
T ss_dssp CEECSSSCCE
T ss_pred eeeccccccc
Confidence 5999999853
No 166
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.52 E-value=5.2 Score=17.72 Aligned_cols=11 Identities=27% Similarity=0.806 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2ytq_A 13 YGCSECGKAFS 23 (46)
T ss_dssp CBCSSSCCBCS
T ss_pred cCCCccChhhC
Confidence 68999999875
No 167
>2xzm_9 RPS31E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_9
Probab=46.49 E-value=6.3 Score=25.01 Aligned_cols=11 Identities=9% Similarity=-0.016 Sum_probs=9.5
Q ss_pred EEeeCCCCeeE
Q 040416 9 IWGCKDSSKVK 19 (47)
Q Consensus 9 IW~C~~C~~~~ 19 (47)
=|+|.+|+.++
T Consensus 131 R~~CGkC~~t~ 141 (189)
T 2xzm_9 131 RHYCGKCHLTL 141 (189)
T ss_dssp CEEETTTCCCB
T ss_pred CCccCCceeEE
Confidence 38999999987
No 168
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=46.23 E-value=9.3 Score=19.17 Aligned_cols=11 Identities=18% Similarity=0.371 Sum_probs=8.8
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 33 ~~C~~C~k~F~ 43 (60)
T 4gzn_C 33 RSCPECGKCFR 43 (60)
T ss_dssp EECTTTCCEES
T ss_pred eECCCCCCCcC
Confidence 67888888875
No 169
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=44.99 E-value=11 Score=17.48 Aligned_cols=12 Identities=17% Similarity=0.243 Sum_probs=9.7
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 12 ~~~C~~C~k~f~ 23 (54)
T 2eps_A 12 PYICQSCGKGFS 23 (54)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCcccC
Confidence 378999999875
No 170
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.97 E-value=8.8 Score=18.72 Aligned_cols=12 Identities=17% Similarity=0.351 Sum_probs=9.3
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.+.|..|++.|.
T Consensus 47 ~~~C~~C~~~f~ 58 (86)
T 1x6h_A 47 AFVCSKCGKTFT 58 (86)
T ss_dssp CEECSSSCCEES
T ss_pred ceECCCCCChhC
Confidence 478888888774
No 171
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=44.82 E-value=12 Score=17.59 Aligned_cols=13 Identities=15% Similarity=0.468 Sum_probs=10.8
Q ss_pred EEEeeCCCCeeEE
Q 040416 8 GIWGCKDSSKVKA 20 (47)
Q Consensus 8 GIW~C~~C~~~~A 20 (47)
.++.|..||..+.
T Consensus 5 ~fY~C~~CGnive 17 (36)
T 1dxg_A 5 DVYKCELCGQVVK 17 (36)
T ss_dssp CEEECTTTCCEEE
T ss_pred cEEEcCCCCcEEE
Confidence 4789999998775
No 172
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=44.71 E-value=5 Score=17.79 Aligned_cols=11 Identities=27% Similarity=0.597 Sum_probs=9.1
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eoh_A 13 YECKECRKTFI 23 (46)
T ss_dssp CCCSSSCCCCS
T ss_pred cCCCCcCchhC
Confidence 67999999875
No 173
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=44.51 E-value=11 Score=18.43 Aligned_cols=12 Identities=25% Similarity=0.440 Sum_probs=9.0
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.+.|..|++.|.
T Consensus 45 ~~~C~~C~~~f~ 56 (77)
T 2ct1_A 45 KFHCPHCDTVIA 56 (77)
T ss_dssp SEECSSSSCEES
T ss_pred ccCCCCCCCccC
Confidence 367888888774
No 174
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=44.42 E-value=5.9 Score=17.53 Aligned_cols=12 Identities=25% Similarity=0.592 Sum_probs=9.7
Q ss_pred EeeCCCCeeEEc
Q 040416 10 WGCKDSSKVKAG 21 (47)
Q Consensus 10 W~C~~C~~~~AG 21 (47)
+.|..|++.|.-
T Consensus 13 ~~C~~C~k~F~~ 24 (46)
T 2emk_A 13 YECKECGKAFSQ 24 (46)
T ss_dssp CBCSSSCCBCSC
T ss_pred eECCCCCchhCC
Confidence 689999998753
No 175
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=44.01 E-value=11 Score=18.26 Aligned_cols=11 Identities=9% Similarity=0.202 Sum_probs=8.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 46 ~~C~~C~k~f~ 56 (74)
T 2lce_A 46 YRCNICGAQFN 56 (74)
T ss_dssp EECTTTCCEES
T ss_pred EECCCCCchhC
Confidence 67888888775
No 176
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=43.95 E-value=11 Score=18.21 Aligned_cols=11 Identities=18% Similarity=0.507 Sum_probs=8.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 43 ~~C~~C~~~f~ 53 (72)
T 1x6e_A 43 YKCLECGKAFS 53 (72)
T ss_dssp EECSSSCCEES
T ss_pred eECCCCCcccC
Confidence 67888888774
No 177
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=43.82 E-value=8.3 Score=21.32 Aligned_cols=19 Identities=11% Similarity=0.282 Sum_probs=14.0
Q ss_pred eeCCCCeeEEccc-cccccc
Q 040416 11 GCKDSSKVKAGGA-YTLNIG 29 (47)
Q Consensus 11 ~C~~C~~~~AGGA-y~~~T~ 29 (47)
.|+.|++.+..|+ ..-.|.
T Consensus 30 ~Ck~C~k~ls~g~~s~~GTS 49 (76)
T 2djr_A 30 TCRLCGRQVSRGPGVNVGTT 49 (76)
T ss_dssp EESSSCCBCCCCSSCCSSSC
T ss_pred ECCCCCCccCCCCCCCCchH
Confidence 6999999998443 555554
No 178
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=43.82 E-value=6.6 Score=18.36 Aligned_cols=11 Identities=45% Similarity=0.939 Sum_probs=8.6
Q ss_pred EEEeeCCCCee
Q 040416 8 GIWGCKDSSKV 18 (47)
Q Consensus 8 GIW~C~~C~~~ 18 (47)
|=|.|.+|+..
T Consensus 5 gDW~C~~C~~~ 15 (33)
T 2k1p_A 5 NDWQCKTCSNV 15 (33)
T ss_dssp SSCBCSSSCCB
T ss_pred CCcccCCCCCc
Confidence 56999999753
No 179
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=43.64 E-value=8.2 Score=19.98 Aligned_cols=18 Identities=17% Similarity=0.191 Sum_probs=14.7
Q ss_pred EEEEEeeCCCCeeEEccc
Q 040416 6 AVGIWGCKDSSKVKAGGA 23 (47)
Q Consensus 6 avGIW~C~~C~~~~AGGA 23 (47)
..|.+.|..||.+++-..
T Consensus 27 ~~ge~vC~~CGlVl~e~~ 44 (58)
T 1dl6_A 27 RAGDMICPECGLVVGDRV 44 (58)
T ss_dssp SSCCEECTTTCCEECCSC
T ss_pred CCCeEEeCCCCCEEeccc
Confidence 568899999999987654
No 180
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=43.51 E-value=13 Score=18.65 Aligned_cols=13 Identities=8% Similarity=0.222 Sum_probs=9.8
Q ss_pred EEEeeCCCCeeEE
Q 040416 8 GIWGCKDSSKVKA 20 (47)
Q Consensus 8 GIW~C~~C~~~~A 20 (47)
=++.|.+||..+-
T Consensus 42 ~fy~C~~Cg~~w~ 54 (57)
T 1qyp_A 42 IFYKCTKCGHTWR 54 (57)
T ss_dssp EEEEESSSCCEEE
T ss_pred EEEEcCCCCCEec
Confidence 4688888888764
No 181
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.95 E-value=4.7 Score=17.81 Aligned_cols=11 Identities=18% Similarity=0.323 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2eoq_A 13 FKCDICGKSFC 23 (46)
T ss_dssp CCCSSSCCCCS
T ss_pred cCCCcCCchhC
Confidence 68999999875
No 182
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=42.93 E-value=6.3 Score=17.36 Aligned_cols=11 Identities=27% Similarity=0.588 Sum_probs=9.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2epz_A 13 FDCIDCGKAFS 23 (46)
T ss_dssp BCCTTTCCCBS
T ss_pred eECCCCCceeC
Confidence 68999999875
No 183
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=42.59 E-value=7.2 Score=20.07 Aligned_cols=12 Identities=17% Similarity=0.213 Sum_probs=10.0
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.|.|..||+..-
T Consensus 3 ~y~C~~CGyvYd 14 (52)
T 1e8j_A 3 IYVCTVCGYEYD 14 (52)
T ss_dssp CEECSSSCCCCC
T ss_pred cEEeCCCCeEEc
Confidence 599999998764
No 184
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=42.55 E-value=12 Score=17.98 Aligned_cols=11 Identities=27% Similarity=0.413 Sum_probs=6.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 2 ~~C~~C~~~f~ 12 (82)
T 2kmk_A 2 FDCKICGKSFK 12 (82)
T ss_dssp EECSSSCCEES
T ss_pred ccCCCCccccc
Confidence 45666666653
No 185
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=42.52 E-value=12 Score=17.18 Aligned_cols=12 Identities=8% Similarity=0.207 Sum_probs=9.5
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.+.|..|++.|.
T Consensus 30 ~~~C~~C~~~f~ 41 (60)
T 2adr_A 30 PYPCGLCNRAFT 41 (60)
T ss_dssp SEECTTTCCEES
T ss_pred CccCCCCCCccC
Confidence 378999999875
No 186
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=42.38 E-value=5.5 Score=16.02 Aligned_cols=11 Identities=18% Similarity=0.525 Sum_probs=8.7
Q ss_pred EeeC--CCCeeEE
Q 040416 10 WGCK--DSSKVKA 20 (47)
Q Consensus 10 W~C~--~C~~~~A 20 (47)
+.|. .|++.|.
T Consensus 4 ~~C~~~~C~k~f~ 16 (32)
T 1zfd_A 4 YSCDHPGCDKAFV 16 (32)
T ss_dssp BCCCCTTCCCCBS
T ss_pred CcCcCCCCCCccC
Confidence 5788 8998875
No 187
>2au3_A DNA primase; zinc ribbon, toprim, RNA polymerase, DNA replication, transf; HET: DNA; 2.00A {Aquifex aeolicus}
Probab=42.21 E-value=7 Score=26.33 Aligned_cols=18 Identities=22% Similarity=0.407 Sum_probs=12.5
Q ss_pred EEEEeeCCCCeeEEcccccc
Q 040416 7 VGIWGCKDSSKVKAGGAYTL 26 (47)
Q Consensus 7 vGIW~C~~C~~~~AGGAy~~ 26 (47)
-|+|+|-.||+ .|.+..+
T Consensus 53 k~~~~CFgCg~--gGd~i~f 70 (407)
T 2au3_A 53 KQIFKCFGCGV--GGDAIKF 70 (407)
T ss_dssp TTEEEETTTCC--EECHHHH
T ss_pred CCEEEECCCCC--CCCHHHH
Confidence 37999999994 4555443
No 188
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.93 E-value=4.8 Score=17.70 Aligned_cols=11 Identities=18% Similarity=0.594 Sum_probs=9.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2ytr_A 13 YKCNECGKAFS 23 (46)
T ss_dssp TCCTTTCCCCS
T ss_pred cCCCCCCCccC
Confidence 67999999875
No 189
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.77 E-value=14 Score=17.25 Aligned_cols=13 Identities=8% Similarity=0.077 Sum_probs=10.7
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-+.|..|++.|.-
T Consensus 18 ~~~C~~C~k~f~~ 30 (73)
T 2ctu_A 18 SQKCSKCGIIFIR 30 (73)
T ss_dssp EEECSSSCCEEEC
T ss_pred CeeCCcccchhCC
Confidence 4789999999864
No 190
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.70 E-value=4.9 Score=17.81 Aligned_cols=11 Identities=18% Similarity=0.543 Sum_probs=9.1
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2ytt_A 13 YQCSECGKSFS 23 (46)
T ss_dssp TCCSSSCCCCS
T ss_pred eeCCCCCcccC
Confidence 67999999875
No 191
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.69 E-value=4.7 Score=17.94 Aligned_cols=11 Identities=18% Similarity=0.510 Sum_probs=9.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 13 ~~C~~C~k~f~ 23 (46)
T 2ytm_A 13 YKCMECGKAFG 23 (46)
T ss_dssp SSBTTTTBCCS
T ss_pred cCCCCCCchhC
Confidence 67999999874
No 192
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=39.91 E-value=13 Score=19.39 Aligned_cols=12 Identities=8% Similarity=0.243 Sum_probs=9.9
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.|.|.-||+..-
T Consensus 3 ~y~C~vCGyvYd 14 (54)
T 4rxn_A 3 KYTCTVCGYIYD 14 (54)
T ss_dssp CEEETTTCCEEC
T ss_pred ceECCCCCeEEC
Confidence 589999998764
No 193
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=39.01 E-value=17 Score=21.35 Aligned_cols=23 Identities=9% Similarity=0.076 Sum_probs=16.9
Q ss_pred EEeeCCCCeeEEcccccccccHHH
Q 040416 9 IWGCKDSSKVKAGGAYTLNIGSAV 32 (47)
Q Consensus 9 IW~C~~C~~~~AGGAy~~~T~~a~ 32 (47)
+.+|++||.-|-| -|.|.-.+-+
T Consensus 51 ~FkCP~CgEEFyG-~~Lp~~EaeK 73 (95)
T 2k5c_A 51 VFKCPVCGEEFYG-KTLPRREAEK 73 (95)
T ss_dssp EEECTTTCCEEET-TSSCTTTHHH
T ss_pred hhcCCCccHHHhc-ccCChHHHHH
Confidence 5789999999986 5666555443
No 194
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=38.85 E-value=13 Score=15.60 Aligned_cols=11 Identities=27% Similarity=0.377 Sum_probs=8.9
Q ss_pred EeeC--CCCeeEE
Q 040416 10 WGCK--DSSKVKA 20 (47)
Q Consensus 10 W~C~--~C~~~~A 20 (47)
..|. .|++.|.
T Consensus 9 ~~C~~~~C~k~f~ 21 (37)
T 1va1_A 9 HICHIQGCGKVYG 21 (37)
T ss_dssp EECCSTTCCCEES
T ss_pred CCCCCCCCCCccC
Confidence 6897 5999885
No 195
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=38.83 E-value=37 Score=22.77 Aligned_cols=37 Identities=8% Similarity=0.135 Sum_probs=31.2
Q ss_pred EEEeeCC--CCeeEEcccccccccHHHHHHHHHHHHHhh
Q 040416 8 GIWGCKD--SSKVKAGGAYTLNIGSAVTARVTIRRLREQ 44 (47)
Q Consensus 8 GIW~C~~--C~~~~AGGAy~~~T~~a~tvk~~irrl~e~ 44 (47)
|-|.|.- |.+.+.-....|+...+..++..-+|.+..
T Consensus 217 ~~~~CPvtGCr~~l~~~dL~pN~~L~~lve~~k~r~~~~ 255 (267)
T 3htk_C 217 TTRDCPQAACSQVVSMRDFVRDPIMELRCKIAKMKESQE 255 (267)
T ss_dssp SCEECSGGGCSCEECGGGEEECHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccccCcCchhhCCcCHHHHHHHHHHHHHHHHh
Confidence 4589998 999999999999999999998886665443
No 196
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=38.83 E-value=12 Score=19.69 Aligned_cols=14 Identities=14% Similarity=0.237 Sum_probs=10.7
Q ss_pred EeeCCCCeeEEccc
Q 040416 10 WGCKDSSKVKAGGA 23 (47)
Q Consensus 10 W~C~~C~~~~AGGA 23 (47)
=+|+.||+.|-+.-
T Consensus 28 HHCR~CG~v~C~~C 41 (73)
T 1vfy_A 28 HHCRSCGGVFCQEH 41 (73)
T ss_dssp EECTTTCCEECGGG
T ss_pred ccCCCCCEEEcccc
Confidence 37999999887654
No 197
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=38.36 E-value=7.2 Score=17.15 Aligned_cols=11 Identities=18% Similarity=0.818 Sum_probs=9.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 13 ~~C~~C~k~F~ 23 (46)
T 2em0_A 13 WKCRECDMCFS 23 (46)
T ss_dssp CCCSSSCCCCS
T ss_pred eECCCCCcccC
Confidence 67999999875
No 198
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=38.35 E-value=7 Score=15.60 Aligned_cols=11 Identities=18% Similarity=0.241 Sum_probs=8.3
Q ss_pred EeeC--CCCeeEE
Q 040416 10 WGCK--DSSKVKA 20 (47)
Q Consensus 10 W~C~--~C~~~~A 20 (47)
..|. .|++.|.
T Consensus 3 ~~C~~~~C~k~f~ 15 (31)
T 1sp2_A 3 FMCTWSYCGKRFT 15 (31)
T ss_dssp CBCCSTTCCCBCS
T ss_pred cCCcCCCCCcccC
Confidence 4686 8998875
No 199
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=38.20 E-value=16 Score=15.11 Aligned_cols=11 Identities=9% Similarity=0.250 Sum_probs=8.9
Q ss_pred EeeC--CCCeeEE
Q 040416 10 WGCK--DSSKVKA 20 (47)
Q Consensus 10 W~C~--~C~~~~A 20 (47)
+.|. .|++.|.
T Consensus 7 ~~C~~~~C~k~f~ 19 (38)
T 1bhi_A 7 FLCTAPGCGQRFT 19 (38)
T ss_dssp EECCCTTTCCEES
T ss_pred eECCCCCCCcccC
Confidence 6898 6999875
No 200
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=37.73 E-value=15 Score=17.79 Aligned_cols=11 Identities=18% Similarity=0.528 Sum_probs=8.9
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 47 ~~C~~C~~~f~ 57 (77)
T 2cot_A 47 YKCDECGKAFI 57 (77)
T ss_dssp EECSSSCCEES
T ss_pred eeCCCCCCccC
Confidence 78888988875
No 201
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=37.06 E-value=16 Score=18.24 Aligned_cols=11 Identities=9% Similarity=0.304 Sum_probs=5.9
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 4 ~~C~~C~k~f~ 14 (88)
T 1llm_C 4 FQCRICMRNFS 14 (88)
T ss_dssp EECTTTCCEES
T ss_pred CcCCCCCCccC
Confidence 45555555553
No 202
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.96 E-value=14 Score=19.95 Aligned_cols=13 Identities=8% Similarity=0.299 Sum_probs=9.8
Q ss_pred eeCCCCeeEEccc
Q 040416 11 GCKDSSKVKAGGA 23 (47)
Q Consensus 11 ~C~~C~~~~AGGA 23 (47)
+|+.||+.|-+--
T Consensus 32 HCR~CG~vfC~~C 44 (84)
T 1x4u_A 32 SCSNCGNSFCSRC 44 (84)
T ss_dssp ECSSSCCEECTTT
T ss_pred hhcCCCcEEChhh
Confidence 7888888876653
No 203
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=36.35 E-value=14 Score=19.87 Aligned_cols=13 Identities=8% Similarity=0.416 Sum_probs=10.2
Q ss_pred eeCCCCeeEEccc
Q 040416 11 GCKDSSKVKAGGA 23 (47)
Q Consensus 11 ~C~~C~~~~AGGA 23 (47)
+|+.||+.|-+.-
T Consensus 37 HCR~CG~v~C~~C 49 (82)
T 2yw8_A 37 HCRNCGHIFCNTC 49 (82)
T ss_dssp ECTTTCCEECSGG
T ss_pred cCCCCCCEEChHH
Confidence 7899998887653
No 204
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=35.52 E-value=15 Score=17.99 Aligned_cols=12 Identities=17% Similarity=0.288 Sum_probs=8.7
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.+.|..|++.|.
T Consensus 62 ~~~C~~C~~~f~ 73 (90)
T 1a1h_A 62 PFACDICGRKFA 73 (90)
T ss_dssp CEECTTTCCEES
T ss_pred CccCCCCCchhC
Confidence 367888888764
No 205
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=35.08 E-value=8.6 Score=20.00 Aligned_cols=11 Identities=27% Similarity=0.259 Sum_probs=9.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|+|.|.
T Consensus 14 y~C~~CgK~F~ 24 (66)
T 2epp_A 14 LPCGLCGKVFT 24 (66)
T ss_dssp CCCTTTCCCCS
T ss_pred cCCCCCCCccC
Confidence 57999999875
No 206
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.05 E-value=18 Score=18.70 Aligned_cols=12 Identities=33% Similarity=0.542 Sum_probs=9.6
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 19 ~~~C~~C~k~f~ 30 (115)
T 2dmi_A 19 KFRCKDCSAAYD 30 (115)
T ss_dssp SEEBSSSSCEES
T ss_pred CEECCccCchhc
Confidence 378999998875
No 207
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=35.03 E-value=18 Score=17.61 Aligned_cols=12 Identities=8% Similarity=0.409 Sum_probs=9.4
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.+.|..|++.|.
T Consensus 65 ~~~C~~C~~~f~ 76 (89)
T 2wbs_A 65 PFQCQKCDRAFS 76 (89)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCCCcccC
Confidence 378999998874
No 208
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=34.89 E-value=18 Score=17.93 Aligned_cols=12 Identities=17% Similarity=0.147 Sum_probs=7.9
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
-+.|..|++.|.
T Consensus 7 ~~~C~~C~~~f~ 18 (95)
T 2yt9_A 7 GVACEICGKIFR 18 (95)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCCccC
Confidence 366777777664
No 209
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=34.40 E-value=15 Score=21.36 Aligned_cols=13 Identities=8% Similarity=0.399 Sum_probs=10.6
Q ss_pred eeCCCCeeEEccc
Q 040416 11 GCKDSSKVKAGGA 23 (47)
Q Consensus 11 ~C~~C~~~~AGGA 23 (47)
+|+.||..|-+.-
T Consensus 87 HCR~CG~vfC~~C 99 (125)
T 1joc_A 87 HCRQCGNIFCAEC 99 (125)
T ss_dssp ECTTTCCEECGGG
T ss_pred cCCCCCeEEChHH
Confidence 8999999887654
No 210
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=34.22 E-value=18 Score=19.23 Aligned_cols=11 Identities=18% Similarity=0.259 Sum_probs=8.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 57 ~~C~~C~k~F~ 67 (85)
T 2lv2_A 57 FPCKYCPATFY 67 (85)
T ss_dssp EECTTSSCEES
T ss_pred cCCCCCCCEeC
Confidence 67888888874
No 211
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=34.18 E-value=18 Score=21.12 Aligned_cols=14 Identities=14% Similarity=0.323 Sum_probs=10.3
Q ss_pred eeEEEEEeeCCCCe
Q 040416 4 RKAVGIWGCKDSSK 17 (47)
Q Consensus 4 R~avGIW~C~~C~~ 17 (47)
...+|||.|..-..
T Consensus 41 ~~~~GvWe~tPG~~ 54 (116)
T 3es4_A 41 GTIVAVWMAEPGIY 54 (116)
T ss_dssp CCEEEEEEECSEEE
T ss_pred CEEEEEEecCCcee
Confidence 45689999977544
No 212
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=34.16 E-value=16 Score=19.72 Aligned_cols=12 Identities=25% Similarity=0.609 Sum_probs=9.6
Q ss_pred eeCCCCeeEEcc
Q 040416 11 GCKDSSKVKAGG 22 (47)
Q Consensus 11 ~C~~C~~~~AGG 22 (47)
+|+.||+.|-+-
T Consensus 39 HCR~CG~v~C~~ 50 (84)
T 1z2q_A 39 HCRNCGYVLCGD 50 (84)
T ss_dssp ECTTTCCEECTG
T ss_pred cccCCCcEEChH
Confidence 789999888665
No 213
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.96 E-value=24 Score=16.73 Aligned_cols=11 Identities=18% Similarity=0.129 Sum_probs=8.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 11 ~~C~~C~k~f~ 21 (66)
T 2eod_A 11 QPCTYCTKEFV 21 (66)
T ss_dssp EECSSSCCEEE
T ss_pred eeccccCCccC
Confidence 57888888876
No 214
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=32.53 E-value=16 Score=22.50 Aligned_cols=14 Identities=21% Similarity=0.546 Sum_probs=11.0
Q ss_pred EeeCCCCeeEEccc
Q 040416 10 WGCKDSSKVKAGGA 23 (47)
Q Consensus 10 W~C~~C~~~~AGGA 23 (47)
-+|+.||..|-+.-
T Consensus 178 hhCr~CG~v~C~~C 191 (220)
T 1dvp_A 178 HHCRNCGQVFCGQC 191 (220)
T ss_dssp EECTTTCCEECSTT
T ss_pred cccCCcCCEEChHH
Confidence 37999999887764
No 215
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=31.93 E-value=18 Score=19.89 Aligned_cols=12 Identities=33% Similarity=0.861 Sum_probs=9.6
Q ss_pred eeCCCCeeEEcc
Q 040416 11 GCKDSSKVKAGG 22 (47)
Q Consensus 11 ~C~~C~~~~AGG 22 (47)
+|+.||+.|-+-
T Consensus 27 HCR~CG~vfC~~ 38 (88)
T 1wfk_A 27 GCKNCGRAFCNG 38 (88)
T ss_dssp ECSSSCCEEETT
T ss_pred cCCCCCCEEChh
Confidence 788999888765
No 216
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=31.91 E-value=29 Score=20.06 Aligned_cols=15 Identities=20% Similarity=0.417 Sum_probs=12.7
Q ss_pred EEEEeeCCCCeeEEc
Q 040416 7 VGIWGCKDSSKVKAG 21 (47)
Q Consensus 7 vGIW~C~~C~~~~AG 21 (47)
.++|.|+.|++...-
T Consensus 24 ~~~~~C~~C~y~~~~ 38 (122)
T 1twf_I 24 RLLFECRTCSYVEEA 38 (122)
T ss_dssp EEEEECSSSSCEEEC
T ss_pred CCEEECCcCCCeeec
Confidence 579999999998753
No 217
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=30.64 E-value=19 Score=19.04 Aligned_cols=10 Identities=20% Similarity=0.365 Sum_probs=7.6
Q ss_pred EeeCCCCeeE
Q 040416 10 WGCKDSSKVK 19 (47)
Q Consensus 10 W~C~~C~~~~ 19 (47)
..|..|++.|
T Consensus 35 ~~C~~C~k~F 44 (96)
T 2ctd_A 35 VSCPTCQAVG 44 (96)
T ss_dssp EECTTTCSCE
T ss_pred cCCCCCCCCc
Confidence 5788888776
No 218
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=30.59 E-value=22 Score=20.80 Aligned_cols=13 Identities=8% Similarity=0.158 Sum_probs=10.6
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
...|..||+.|-.
T Consensus 132 ~y~C~~Cg~~~~~ 144 (165)
T 2lcq_A 132 RYVCIGCGRKFST 144 (165)
T ss_dssp CEEESSSCCEESS
T ss_pred EEECCCCCCcccC
Confidence 3689999999864
No 219
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.56 E-value=11 Score=19.53 Aligned_cols=11 Identities=18% Similarity=0.190 Sum_probs=8.6
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 25 ~~C~~C~k~f~ 35 (98)
T 2gqj_A 25 AVCPTCNVVTR 35 (98)
T ss_dssp CCCTTTCCCCS
T ss_pred cCCCCCCCChh
Confidence 67888888774
No 220
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=29.78 E-value=20 Score=21.14 Aligned_cols=15 Identities=20% Similarity=0.155 Sum_probs=11.4
Q ss_pred eeCCCCeeEEccccc
Q 040416 11 GCKDSSKVKAGGAYT 25 (47)
Q Consensus 11 ~C~~C~~~~AGGAy~ 25 (47)
+|+.||+.|-+--=.
T Consensus 37 HCR~CG~ifC~~Cs~ 51 (120)
T 1y02_A 37 TCLDCKKNFCMTCSS 51 (120)
T ss_dssp ECTTTCCEECGGGEE
T ss_pred cCCCCCCeeCHHHhC
Confidence 799999988775533
No 221
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=29.75 E-value=24 Score=18.05 Aligned_cols=12 Identities=17% Similarity=0.213 Sum_probs=9.7
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.+.|..|++.|.
T Consensus 65 ~~~C~~C~~~f~ 76 (110)
T 2csh_A 65 PYECNICAKRFM 76 (110)
T ss_dssp CEECSSSCCEES
T ss_pred CeeCCCCcchhc
Confidence 478999998875
No 222
>2lo3_A SAGA-associated factor 73; zinc-finger, deubiquitination, transcription factor, SAGA CO transcription; NMR {Saccharomyces cerevisiae}
Probab=29.54 E-value=23 Score=18.29 Aligned_cols=11 Identities=27% Similarity=0.235 Sum_probs=9.0
Q ss_pred eeCCCCeeEEc
Q 040416 11 GCKDSSKVKAG 21 (47)
Q Consensus 11 ~C~~C~~~~AG 21 (47)
.|.+||+-++=
T Consensus 19 vC~~CgkPi~l 29 (44)
T 2lo3_A 19 VCEKCGKPLAL 29 (44)
T ss_dssp ECTTTCCEEET
T ss_pred hhcccCCcchH
Confidence 59999998863
No 223
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=29.47 E-value=49 Score=16.30 Aligned_cols=23 Identities=17% Similarity=0.368 Sum_probs=16.4
Q ss_pred eeCCCCeeEEcccccccccHHHHHHHHHHHHHhhh
Q 040416 11 GCKDSSKVKAGGAYTLNIGSAVTARVTIRRLREQT 45 (47)
Q Consensus 11 ~C~~C~~~~AGGAy~~~T~~a~tvk~~irrl~e~~ 45 (47)
+|+-|.|+.. -|+.-|+-+||..
T Consensus 11 hcrfckkkys------------dvknlikhire~h 33 (37)
T 2elu_A 11 HCRFCKKKYS------------DVKNLIKHIRDAH 33 (37)
T ss_dssp EETTTTEECS------------SHHHHHHHHHHTT
T ss_pred HHHHHHHHHH------------HHHHHHHHHHHhc
Confidence 6999998853 3666777777754
No 224
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=29.37 E-value=21 Score=19.54 Aligned_cols=16 Identities=25% Similarity=0.414 Sum_probs=11.5
Q ss_pred EeeCCCCeeEEccccc
Q 040416 10 WGCKDSSKVKAGGAYT 25 (47)
Q Consensus 10 W~C~~C~~~~AGGAy~ 25 (47)
-+|+.||..|-+.--.
T Consensus 37 hhCr~CG~v~C~~Cs~ 52 (90)
T 3t7l_A 37 HHCRACGKVFCGVCCN 52 (90)
T ss_dssp EECTTTCCEECGGGSC
T ss_pred ccccCCCCEECCcccC
Confidence 3789999888765433
No 225
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.95 E-value=14 Score=18.90 Aligned_cols=14 Identities=21% Similarity=0.696 Sum_probs=10.9
Q ss_pred eEEEEEeeCCCCee
Q 040416 5 KAVGIWGCKDSSKV 18 (47)
Q Consensus 5 ~avGIW~C~~C~~~ 18 (47)
...|-|.|..|...
T Consensus 7 ~~~g~W~C~~C~v~ 20 (47)
T 2ebq_A 7 GVIGTWDCDTCLVQ 20 (47)
T ss_dssp CCSSSEECSSSCCE
T ss_pred CCCCceECCeeecc
Confidence 45688999999754
No 226
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=28.78 E-value=27 Score=17.29 Aligned_cols=11 Identities=9% Similarity=0.296 Sum_probs=8.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 65 ~~C~~C~~~f~ 75 (96)
T 2dmd_A 65 FKCQICPYASR 75 (96)
T ss_dssp EECSSSSCEES
T ss_pred ccCCCCCCccC
Confidence 67888888774
No 227
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=28.63 E-value=26 Score=17.99 Aligned_cols=11 Identities=18% Similarity=0.407 Sum_probs=8.0
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 95 ~~C~~C~~~f~ 105 (124)
T 2dlq_A 95 YKCSSCSQQFM 105 (124)
T ss_dssp EECSSSCCEES
T ss_pred ccCCCccchhC
Confidence 67888887764
No 228
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.55 E-value=24 Score=16.13 Aligned_cols=11 Identities=9% Similarity=0.214 Sum_probs=9.0
Q ss_pred EeeCC--CCeeEE
Q 040416 10 WGCKD--SSKVKA 20 (47)
Q Consensus 10 W~C~~--C~~~~A 20 (47)
..|.. |++.|+
T Consensus 10 ~~C~~~~C~k~F~ 22 (38)
T 2eln_A 10 LKCPTDGCDYSTP 22 (38)
T ss_dssp EECSSSSCCCEES
T ss_pred CCCCCCCCCCccC
Confidence 68975 999986
No 229
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.47 E-value=11 Score=19.30 Aligned_cols=12 Identities=25% Similarity=0.626 Sum_probs=9.7
Q ss_pred EEEEEeeCCCCe
Q 040416 6 AVGIWGCKDSSK 17 (47)
Q Consensus 6 avGIW~C~~C~~ 17 (47)
..|-|.|..|.-
T Consensus 8 ~~gsW~C~~C~v 19 (47)
T 2ebr_A 8 PEGSWDCELCLV 19 (47)
T ss_dssp CCSSCCCSSSCC
T ss_pred CCCeeECCeeec
Confidence 468899999974
No 230
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=28.43 E-value=17 Score=17.36 Aligned_cols=12 Identities=25% Similarity=0.631 Sum_probs=9.3
Q ss_pred EEEEeeCCCCee
Q 040416 7 VGIWGCKDSSKV 18 (47)
Q Consensus 7 vGIW~C~~C~~~ 18 (47)
.|-|.|.-|...
T Consensus 5 ~G~W~C~~C~v~ 16 (34)
T 3gj5_B 5 SGSWDCEVCLVQ 16 (34)
T ss_dssp -CCEECTTTCCE
T ss_pred CCceECCeeEeE
Confidence 578999999864
No 231
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=28.22 E-value=26 Score=15.56 Aligned_cols=13 Identities=15% Similarity=0.304 Sum_probs=9.9
Q ss_pred EEeeC--CCCeeEEc
Q 040416 9 IWGCK--DSSKVKAG 21 (47)
Q Consensus 9 IW~C~--~C~~~~AG 21 (47)
-+.|. .|++.|.-
T Consensus 18 ~~~C~~~~C~k~F~~ 32 (47)
T 1ncs_A 18 TFECLFPGCTKTFKR 32 (47)
T ss_dssp EEECCCTTCCCEECS
T ss_pred CeECCCCCCCCccCC
Confidence 37895 79999863
No 232
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=28.14 E-value=22 Score=22.31 Aligned_cols=16 Identities=13% Similarity=0.409 Sum_probs=11.7
Q ss_pred EeeCCCCeeEEccccc
Q 040416 10 WGCKDSSKVKAGGAYT 25 (47)
Q Consensus 10 W~C~~C~~~~AGGAy~ 25 (47)
-+|+.||..|-+.--.
T Consensus 181 hHCR~CG~v~C~~Cs~ 196 (226)
T 3zyq_A 181 HHCRACGQIFCGKCSS 196 (226)
T ss_dssp EECTTTCCEECTTTCC
T ss_pred cccCCCcCEeChhhcC
Confidence 3799999988765433
No 233
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=27.81 E-value=40 Score=18.45 Aligned_cols=16 Identities=6% Similarity=-0.004 Sum_probs=12.9
Q ss_pred EEEEeeCCCCeeEEcc
Q 040416 7 VGIWGCKDSSKVKAGG 22 (47)
Q Consensus 7 vGIW~C~~C~~~~AGG 22 (47)
|=.|.|..||..+-..
T Consensus 34 v~~~~C~~CGE~~~d~ 49 (133)
T 3o9x_A 34 IHGLYCVHCEESIMNK 49 (133)
T ss_dssp EEEEEESSSSCEECCH
T ss_pred CceeECCCCCCEeecH
Confidence 4579999999998553
No 234
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=27.13 E-value=31 Score=18.90 Aligned_cols=11 Identities=9% Similarity=0.380 Sum_probs=9.1
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
..|..|++.|.
T Consensus 51 f~C~~Cgk~F~ 61 (102)
T 2ghf_A 51 YVCVECNFLTK 61 (102)
T ss_dssp EEETTTTEEES
T ss_pred cCCCCCCcccC
Confidence 68999998875
No 235
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=26.89 E-value=17 Score=18.19 Aligned_cols=11 Identities=9% Similarity=0.323 Sum_probs=8.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 76 ~~C~~C~~~f~ 86 (100)
T 2ebt_A 76 FQCGVCNRSFS 86 (100)
T ss_dssp CBCSSSCCBCS
T ss_pred eECCCCcCccC
Confidence 67888888764
No 236
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=26.35 E-value=29 Score=18.30 Aligned_cols=11 Identities=9% Similarity=-0.004 Sum_probs=7.8
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 75 ~~C~~C~k~f~ 85 (129)
T 2wbt_A 75 FVCPLCLMPFS 85 (129)
T ss_dssp EECTTTCCEES
T ss_pred eECCCCCcccC
Confidence 56777777764
No 237
>3odc_A Poly [ADP-ribose] polymerase 1; protein-DNA complex, PARP zinc finger, DNA binding protein-D complex; 2.80A {Homo sapiens} PDB: 3ode_A 2l31_A
Probab=26.13 E-value=17 Score=21.11 Aligned_cols=18 Identities=22% Similarity=0.309 Sum_probs=14.1
Q ss_pred eeCCCCeeEEcccccccc
Q 040416 11 GCKDSSKVKAGGAYTLNI 28 (47)
Q Consensus 11 ~C~~C~~~~AGGAy~~~T 28 (47)
.|+.|+.+++-|..-+.+
T Consensus 21 ~Ck~C~~kI~Kg~lRig~ 38 (111)
T 3odc_A 21 TCKGCMEKIEKGQVRLSK 38 (111)
T ss_dssp BCTTTCCBCCTTCEEEEE
T ss_pred cccccCCCccCCceEEeE
Confidence 699999999888765544
No 238
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.70 E-value=13 Score=19.79 Aligned_cols=13 Identities=23% Similarity=0.808 Sum_probs=10.3
Q ss_pred eEEEEEeeCCCCe
Q 040416 5 KAVGIWGCKDSSK 17 (47)
Q Consensus 5 ~avGIW~C~~C~~ 17 (47)
...|-|.|.-|+-
T Consensus 27 ~~~GsWeC~~C~V 39 (57)
T 2ebv_A 27 RPIGSWECSVCCV 39 (57)
T ss_dssp CCSSSCCCSSSCC
T ss_pred CCCCeeeCCeeEc
Confidence 3468899999974
No 239
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=25.58 E-value=32 Score=17.58 Aligned_cols=11 Identities=18% Similarity=0.498 Sum_probs=8.3
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 67 ~~C~~C~~~f~ 77 (119)
T 2jp9_A 67 FQCKTCQRKFS 77 (119)
T ss_dssp EECTTTCCEES
T ss_pred ccCCccCchhC
Confidence 67888888774
No 240
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.92 E-value=36 Score=14.66 Aligned_cols=11 Identities=9% Similarity=0.262 Sum_probs=9.1
Q ss_pred EeeC--CCCeeEE
Q 040416 10 WGCK--DSSKVKA 20 (47)
Q Consensus 10 W~C~--~C~~~~A 20 (47)
+.|. .|++.|.
T Consensus 13 ~~C~~~~C~k~f~ 25 (48)
T 2ent_A 13 FACTWPGCGWRFS 25 (48)
T ss_dssp EECCSSSCCCEES
T ss_pred eECCCCCCCCccC
Confidence 6897 8999885
No 241
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=24.85 E-value=22 Score=17.20 Aligned_cols=14 Identities=21% Similarity=0.195 Sum_probs=11.0
Q ss_pred EEEEeeCCCCeeEE
Q 040416 7 VGIWGCKDSSKVKA 20 (47)
Q Consensus 7 vGIW~C~~C~~~~A 20 (47)
.|-+.|..||..+.
T Consensus 22 ~gelvC~~CG~v~~ 35 (50)
T 1pft_A 22 RGEIVCAKCGYVIE 35 (50)
T ss_dssp TTEEEESSSCCBCC
T ss_pred CCeEECcccCCccc
Confidence 46789999998764
No 242
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=23.73 E-value=36 Score=17.94 Aligned_cols=13 Identities=15% Similarity=0.378 Sum_probs=10.4
Q ss_pred EEeeCCCCeeEEc
Q 040416 9 IWGCKDSSKVKAG 21 (47)
Q Consensus 9 IW~C~~C~~~~AG 21 (47)
-..|..|++.|.-
T Consensus 25 py~C~~C~k~F~~ 37 (88)
T 1x6f_A 25 TYQCKHCDSKLQS 37 (88)
T ss_dssp CEECSSSCCEESS
T ss_pred CCcCCCCCCEeCC
Confidence 3789999998853
No 243
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=23.32 E-value=17 Score=20.10 Aligned_cols=12 Identities=33% Similarity=0.753 Sum_probs=0.0
Q ss_pred EEEEeeCCCCee
Q 040416 7 VGIWGCKDSSKV 18 (47)
Q Consensus 7 vGIW~C~~C~~~ 18 (47)
.|-|.|..|+..
T Consensus 6 ~g~W~C~~C~~~ 17 (92)
T 3gj8_B 6 VGSWECPVCCVS 17 (92)
T ss_dssp ------------
T ss_pred CcCCCCCcCCCE
Confidence 478999988754
No 244
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=22.14 E-value=40 Score=17.43 Aligned_cols=11 Identities=18% Similarity=0.314 Sum_probs=7.5
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 35 ~~C~~C~~~f~ 45 (124)
T 1ubd_C 35 HVCAECGKAFV 45 (124)
T ss_dssp EECTTTCCEES
T ss_pred eECCCCCchhC
Confidence 56777777664
No 245
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=21.83 E-value=46 Score=18.68 Aligned_cols=20 Identities=15% Similarity=0.051 Sum_probs=15.9
Q ss_pred EEEeeCCCCeeEEccccccc
Q 040416 8 GIWGCKDSSKVKAGGAYTLN 27 (47)
Q Consensus 8 GIW~C~~C~~~~AGGAy~~~ 27 (47)
+..+|..|++-|.-.|+=|+
T Consensus 17 ~~~~C~~C~~~~~~~afCPe 36 (81)
T 2jrp_A 17 DTAHCETCAKDFSLQALCPD 36 (81)
T ss_dssp SEEECTTTCCEEEEEEECSS
T ss_pred CceECccccccCCCcccCcc
Confidence 35679999999988887765
No 246
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=21.71 E-value=28 Score=16.43 Aligned_cols=13 Identities=23% Similarity=0.682 Sum_probs=9.3
Q ss_pred EEEEEeeCCCCee
Q 040416 6 AVGIWGCKDSSKV 18 (47)
Q Consensus 6 avGIW~C~~C~~~ 18 (47)
..|-|.|..|...
T Consensus 4 ~~g~W~C~~C~~~ 16 (33)
T 3gj3_B 4 GSGTWDCDTCLVQ 16 (33)
T ss_dssp --CCEECTTTCCE
T ss_pred CCCceeCCcccCC
Confidence 4578999999764
No 247
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=21.47 E-value=38 Score=19.11 Aligned_cols=11 Identities=27% Similarity=0.444 Sum_probs=9.1
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
-.|.+||+.+-
T Consensus 92 liC~~Cg~v~~ 102 (136)
T 1mzb_A 92 MVCVDTGEVIE 102 (136)
T ss_dssp EEETTTCCEEE
T ss_pred EEECCCCCEEE
Confidence 47999999875
No 248
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=21.39 E-value=24 Score=17.85 Aligned_cols=12 Identities=17% Similarity=0.144 Sum_probs=8.3
Q ss_pred EEeeCCCCeeEE
Q 040416 9 IWGCKDSSKVKA 20 (47)
Q Consensus 9 IW~C~~C~~~~A 20 (47)
.+.|..|++.|.
T Consensus 17 ~~~C~~C~~~f~ 28 (106)
T 2ee8_A 17 EFICKFCGRHFT 28 (106)
T ss_dssp CCBCSSSCCBCS
T ss_pred CeECCCCCCccC
Confidence 367888877664
No 249
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=21.33 E-value=38 Score=18.97 Aligned_cols=11 Identities=18% Similarity=0.329 Sum_probs=8.2
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
+.|..|++.|.
T Consensus 79 ~~C~~C~k~F~ 89 (133)
T 2lt7_A 79 YQCLACGKSFI 89 (133)
T ss_dssp EEESSSCCEES
T ss_pred ccCCCCCCCcC
Confidence 67888888774
No 250
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=21.22 E-value=23 Score=21.16 Aligned_cols=16 Identities=25% Similarity=0.528 Sum_probs=12.3
Q ss_pred EEEEeeCCCCeeEEcc
Q 040416 7 VGIWGCKDSSKVKAGG 22 (47)
Q Consensus 7 vGIW~C~~C~~~~AGG 22 (47)
.-+|.|+.|++...-.
T Consensus 44 ~l~~~CrtCgY~~~~~ 59 (133)
T 3qt1_I 44 RLLFECRTCSYVEEAG 59 (133)
T ss_dssp CBCCBCSSSCCBCCCS
T ss_pred eeEEECCCCCCcEEcC
Confidence 3479999999987543
No 251
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=20.63 E-value=41 Score=19.34 Aligned_cols=11 Identities=27% Similarity=0.564 Sum_probs=9.0
Q ss_pred EeeCCCCeeEE
Q 040416 10 WGCKDSSKVKA 20 (47)
Q Consensus 10 W~C~~C~~~~A 20 (47)
-.|.+||+.+-
T Consensus 91 liC~~Cg~v~~ 101 (145)
T 3eyy_A 91 LVCRDCTNVIE 101 (145)
T ss_dssp EEESSSSCEEE
T ss_pred EEECCCCCEEE
Confidence 46999999974
No 252
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=20.45 E-value=57 Score=16.30 Aligned_cols=11 Identities=9% Similarity=0.181 Sum_probs=7.3
Q ss_pred EEeeCCCCeeE
Q 040416 9 IWGCKDSSKVK 19 (47)
Q Consensus 9 IW~C~~C~~~~ 19 (47)
...|.+||+.|
T Consensus 37 Fy~C~~Cg~~w 47 (50)
T 1tfi_A 37 FVVCNECGNRW 47 (50)
T ss_dssp EEEESSSCCEE
T ss_pred EEEcCCCCCeE
Confidence 46677777664
No 253
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=20.40 E-value=48 Score=15.69 Aligned_cols=11 Identities=18% Similarity=0.480 Sum_probs=6.3
Q ss_pred Eee--CCCCeeEE
Q 040416 10 WGC--KDSSKVKA 20 (47)
Q Consensus 10 W~C--~~C~~~~A 20 (47)
+.| ..|++.|.
T Consensus 2 ~~C~~~~C~~~f~ 14 (85)
T 2j7j_A 2 YVCHFENCGKAFK 14 (85)
T ss_dssp EECCSTTCCCEES
T ss_pred ccCCCCCCCcccC
Confidence 456 66666554
No 254
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=20.38 E-value=96 Score=18.61 Aligned_cols=23 Identities=22% Similarity=0.367 Sum_probs=19.8
Q ss_pred ccccccHHHHHHHHHHHHHhhhh
Q 040416 24 YTLNIGSAVTARVTIRRLREQTE 46 (47)
Q Consensus 24 y~~~T~~a~tvk~~irrl~e~~e 46 (47)
|.|.++.-..++.+++-+++.++
T Consensus 282 ~~p~~~~~e~l~~~~~~~~~~~~ 304 (313)
T 3ehe_A 282 WKPRYNSEEAVRMAVRDLVEDLD 304 (313)
T ss_dssp CCCSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHhCcc
Confidence 88988999999999998888654
Done!