BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040420
(169 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224134208|ref|XP_002321763.1| predicted protein [Populus trichocarpa]
gi|222868759|gb|EEF05890.1| predicted protein [Populus trichocarpa]
Length = 170
Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 142/169 (84%), Gaps = 1/169 (0%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQ 60
M LHAP R L T +S PP LLAP GNN GL+ P DRFALKSSF +PSLHLL++ +QQQ
Sbjct: 1 MALHAPIR-LQATKTSPPPSLLAPNGNNVGLKGPTDRFALKSSFFSPSLHLLIASYNQQQ 59
Query: 61 LLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
LASAAP+FSMR A+KQAYICRDCGYIYN+RKPFD+ PDNYFCPVCGAPKRRFR Y PAV
Sbjct: 60 PLASAAPRFSMRAATKQAYICRDCGYIYNDRKPFDKQPDNYFCPVCGAPKRRFREYMPAV 119
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
T+ ND VRKARKEQIQ+DEAIG+ALPIA+ V VALAG+YFY+N++F
Sbjct: 120 TKNVNDKDVRKARKEQIQKDEAIGRALPIAVVVGIVALAGIYFYINNSF 168
>gi|118485870|gb|ABK94782.1| unknown [Populus trichocarpa]
Length = 170
Score = 259 bits (662), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 142/169 (84%), Gaps = 1/169 (0%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQ 60
M LHAP R L T +S PP LLAP GNN GL+ P DRFALKSSF +PSLHLL++ +QQQ
Sbjct: 1 MALHAPIR-LQATKTSPPPSLLAPNGNNVGLKCPTDRFALKSSFFSPSLHLLIASYNQQQ 59
Query: 61 LLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
LASAAP+FSMR A+KQAYICRDCGYIYN+RKPFD+ PDNYFCPVCGAPKRRFR Y PAV
Sbjct: 60 PLASAAPRFSMRAATKQAYICRDCGYIYNDRKPFDKQPDNYFCPVCGAPKRRFREYMPAV 119
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
T+ ND VRKARKEQIQ+DEAIG+ALPIA+ V VALAG+YFY+N++F
Sbjct: 120 TKNVNDKDVRKARKEQIQKDEAIGRALPIAVVVGIVALAGIYFYINNSF 168
>gi|118489155|gb|ABK96384.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 170
Score = 257 bits (657), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/169 (72%), Positives = 141/169 (83%), Gaps = 1/169 (0%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQ 60
M LHAP R L T +S PP LLAP GNN GL+ P DRFALKSSF +PSLHLL++ +QQQ
Sbjct: 1 MALHAPIR-LQATKTSPPPSLLAPNGNNVGLKAPTDRFALKSSFFSPSLHLLIASYNQQQ 59
Query: 61 LLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
LASAAP+FSMR A+KQAYICRDCGYIYN+RKPFD+ PDNYFCPVCGAPKRRFR Y PAV
Sbjct: 60 PLASAAPRFSMRAATKQAYICRDCGYIYNDRKPFDKQPDNYFCPVCGAPKRRFREYMPAV 119
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
T+ ND VRKARK QIQ+DEAIG+ALPIA+ V VALAG+YFY+N++F
Sbjct: 120 TKNVNDKDVRKARKAQIQKDEAIGRALPIAVVVGIVALAGIYFYINNSF 168
>gi|255540027|ref|XP_002511078.1| electron transporter, putative [Ricinus communis]
gi|223550193|gb|EEF51680.1| electron transporter, putative [Ricinus communis]
Length = 170
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/168 (72%), Positives = 137/168 (81%), Gaps = 2/168 (1%)
Query: 2 GLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQL 61
LHAP+R L + S+ P LLAP +NAGLR P DRFALKSSF +PSLHLLL P +Q +
Sbjct: 3 ALHAPSR-LQASMSTPLPSLLAPISSNAGLRPPPDRFALKSSFFSPSLHLLL-PSNQHRP 60
Query: 62 LASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
LA+AAP+FSMRVASKQAYICRDCGYIYNER PF++LPD YFCPVCGAPKRRFR YTP V
Sbjct: 61 LAAAAPRFSMRVASKQAYICRDCGYIYNERTPFEKLPDKYFCPVCGAPKRRFRQYTPTVN 120
Query: 122 RGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
+ N T RKARK QIQRDEAIG+ALPIAI V VALAGLYFYL+S+F
Sbjct: 121 KNDNQTDTRKARKAQIQRDEAIGRALPIAIVVGVVALAGLYFYLSSSF 168
>gi|317106608|dbj|BAJ53115.1| JHL07K02.5 [Jatropha curcas]
Length = 170
Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 123/171 (71%), Positives = 140/171 (81%), Gaps = 5/171 (2%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLL-LSPPHQ- 58
M L APTR + S P LLAP G+NAGLR P+DRFALKSSF +PSL+LL L+ +Q
Sbjct: 1 MALQAPTRLQARKPS---PSLLAPNGSNAGLRAPSDRFALKSSFFSPSLYLLSLANSNQL 57
Query: 59 QQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTP 118
QQ LAS+AP++SMRVASKQAYICRDCGYIYNER PF++LPD YFCPVCGAPKRRF+PY P
Sbjct: 58 QQPLASSAPRYSMRVASKQAYICRDCGYIYNERTPFEKLPDKYFCPVCGAPKRRFKPYAP 117
Query: 119 AVTRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
VT+ N T VRKARK Q+QRDEAIG+ALPI IAV AVALAGLYFYLN +F
Sbjct: 118 TVTKNDNQTDVRKARKAQLQRDEAIGRALPIGIAVGAVALAGLYFYLNGSF 168
>gi|225456515|ref|XP_002284699.1| PREDICTED: uncharacterized protein LOC100259528 [Vitis vinifera]
Length = 218
Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/167 (72%), Positives = 134/167 (80%), Gaps = 7/167 (4%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQ 60
M L +PTR +T S P LAPTGN GLRRP DRFAL+SSF +PS+HLLL PP+Q +
Sbjct: 57 MALPSPTRLEAT--KSCP---LAPTGN-VGLRRPMDRFALRSSFFSPSIHLLL-PPNQHR 109
Query: 61 LLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
L S APK SMRVASKQAYICRDCGYIYN+R PF++LPD YFCPVCGAPKRRFRPY PAV
Sbjct: 110 ALPSTAPKISMRVASKQAYICRDCGYIYNDRTPFEKLPDGYFCPVCGAPKRRFRPYQPAV 169
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNS 167
+ AND VRKARK QIQ+DEAIG+ALPIAI V ALAGLYFYLNS
Sbjct: 170 AKNANDMDVRKARKTQIQKDEAIGRALPIAIVVGIAALAGLYFYLNS 216
>gi|346472619|gb|AEO36154.1| hypothetical protein [Amblyomma maculatum]
Length = 166
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 130/171 (76%), Gaps = 7/171 (4%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAP-TGNNAGLRRPADRFALKSSFSAPSLH-LLLSPPHQ 58
M L AP +S+T PLL P G AGLRRP+DR+AL+SSF +PS+ LLLS
Sbjct: 1 MALQAPA---GLKSSTTRAPLLLPQAGQAAGLRRPSDRYALRSSFFSPSVQQLLLS--SS 55
Query: 59 QQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTP 118
Q+ + + PKFSMRVASKQAYICRDCGYIYN++ PF++LPD YFCPVCGAPKRRFR Y P
Sbjct: 56 QKAVPTTEPKFSMRVASKQAYICRDCGYIYNDKTPFEKLPDKYFCPVCGAPKRRFRAYEP 115
Query: 119 AVTRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
+T+ AN VRKARKEQ++RDEAIGKALP+A+ + LAGLYFYLN+A+
Sbjct: 116 KITKDANSLDVRKARKEQLKRDEAIGKALPVALVLGVAGLAGLYFYLNNAY 166
>gi|351724821|ref|NP_001236303.1| uncharacterized protein LOC100500575 [Glycine max]
gi|255630661|gb|ACU15690.1| unknown [Glycine max]
Length = 171
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/169 (63%), Positives = 125/169 (73%), Gaps = 6/169 (3%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQ 60
M + APT +L+T S P LAP N AGLR + ALKSSF + SL+LLL P QQ
Sbjct: 9 MHMQAPTISLNTARS---PSSLAPAAN-AGLRPHLNPLALKSSFFSGSLNLLLHP--MQQ 62
Query: 61 LLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
L S AP+ SMRVASKQAYICRDCGYIYN+R PF++LPD +FCPVCGAPKRRFRPY P V
Sbjct: 63 YLTSGAPRISMRVASKQAYICRDCGYIYNDRIPFEKLPDKFFCPVCGAPKRRFRPYAPTV 122
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
R AND VRKARK +I+++EAIG ALPIA AV LAG+YFYLN+ F
Sbjct: 123 ARNANDKDVRKARKSEIKKEEAIGNALPIAAAVGIAVLAGIYFYLNNKF 171
>gi|388512243|gb|AFK44183.1| unknown [Lotus japonicus]
Length = 161
Score = 205 bits (521), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 116/142 (81%), Gaps = 1/142 (0%)
Query: 28 NAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYI 87
N GLRRP + ALKS F + SL+L L P HQQ LL S AP+ SMRVASKQ+YICRDCGYI
Sbjct: 21 NTGLRRPFNPLALKSPFFSGSLNLYLHPNHQQ-LLTSVAPRISMRVASKQSYICRDCGYI 79
Query: 88 YNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKAL 147
Y++R PF++LPDNYFC VCGAPKRRF+PY P VT+ AND VRKARK ++QRD+AIG+AL
Sbjct: 80 YSDRIPFEKLPDNYFCRVCGAPKRRFKPYAPPVTKNANDIDVRKARKAELQRDQAIGRAL 139
Query: 148 PIAIAVAAVALAGLYFYLNSAF 169
PIA+AV ALAGLYFYLNS +
Sbjct: 140 PIAVAVGIAALAGLYFYLNSVY 161
>gi|356512934|ref|XP_003525169.1| PREDICTED: uncharacterized protein LOC100812204 [Glycine max]
Length = 154
Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 114/151 (75%), Gaps = 3/151 (1%)
Query: 20 PLLAPTGNNAGLRRP-ADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQA 78
P NA LRRP + FALKSSF + SL+L L P H L SA P+ SMRVASKQA
Sbjct: 6 PSFHIVNGNACLRRPLMNPFALKSSFFSGSLNLYLHPNHHH--LTSAPPRISMRVASKQA 63
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQ 138
YICRDCGYIY +R PF++LPDNYFCPVCGAPKRRFR Y PAVT+ NDTAVRKARK ++Q
Sbjct: 64 YICRDCGYIYKDRTPFEKLPDNYFCPVCGAPKRRFRAYAPAVTKNDNDTAVRKARKAELQ 123
Query: 139 RDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
RDEAIGKA PIAI V LAGLYFYLNS +
Sbjct: 124 RDEAIGKAFPIAIVVGIAVLAGLYFYLNSQY 154
>gi|388511965|gb|AFK44044.1| unknown [Lotus japonicus]
Length = 160
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/168 (62%), Positives = 121/168 (72%), Gaps = 11/168 (6%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQ 60
M L P+ L T S LAP GNNAGLR + FALKSSF + SL L P+Q +
Sbjct: 1 MALQTPSTTLHTARS------LAPNGNNAGLRPVFNPFALKSSFFSGSLLL---HPNQNR 51
Query: 61 LLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
L+ S AP+ SMRVASKQAYICRDCGYIYNER PF++LPD YFCPVCGAPKRRFR Y PAV
Sbjct: 52 LVTSPAPRISMRVASKQAYICRDCGYIYNERTPFEKLPDKYFCPVCGAPKRRFRTYAPAV 111
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAG--LYFYLN 166
T+ AN T VRK RK ++Q++E+IGKALPIA+AV LA YFYLN
Sbjct: 112 TKNANSTDVRKERKAELQKEESIGKALPIAVAVGIAVLAAALYYFYLN 159
>gi|224093358|ref|XP_002334840.1| predicted protein [Populus trichocarpa]
gi|222875142|gb|EEF12273.1| predicted protein [Populus trichocarpa]
Length = 174
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/166 (65%), Positives = 121/166 (72%), Gaps = 3/166 (1%)
Query: 3 LHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLL-SPPHQQQL 61
LHAPTR L T +S P LL+ TGNN GLR P DRFALKSSF +PSLHLL+ S HQQQ
Sbjct: 8 LHAPTR-LPATKTSPSPCLLSLTGNNVGLRGPTDRFALKSSFFSPSLHLLITSYKHQQQP 66
Query: 62 LASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQ-LPDNYFCPVCGAPKRRFRPYTPAV 120
LA AAP+FSMR A+KQAYICRDCGYIYN+RKP L +CGAPKRRFR Y PAV
Sbjct: 67 LAPAAPRFSMRAAAKQAYICRDCGYIYNDRKPLKSYLIITSALVICGAPKRRFREYMPAV 126
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLN 166
+ NDT VRKARK QIQRDEAIG+ALPIA+ V VA + +N
Sbjct: 127 AKNDNDTDVRKARKTQIQRDEAIGRALPIAVVVGVVACLKILKVVN 172
>gi|351726178|ref|NP_001235582.1| uncharacterized protein LOC100306219 [Glycine max]
gi|255627899|gb|ACU14294.1| unknown [Glycine max]
Length = 157
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 117/154 (75%), Gaps = 5/154 (3%)
Query: 19 PPLLAPTGNNAGLRRPA---DRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVAS 75
PP L NAGLRRP F+LKSSF + SL+ L P H L SA P+ SMRVAS
Sbjct: 6 PPSLHTVNGNAGLRRPLMNPSSFSLKSSFFSGSLNFYLHPNHLH--LTSAPPRISMRVAS 63
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKE 135
KQAYICRDCGYIY +R PF++LPDNYFCPVCGAPKRRFRPY PA+T+ NDTAVRKARK
Sbjct: 64 KQAYICRDCGYIYKDRTPFEKLPDNYFCPVCGAPKRRFRPYAPAITKNDNDTAVRKARKA 123
Query: 136 QIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
++QRDEA+GKALPIAI V LAGLYFYLNS +
Sbjct: 124 ELQRDEAVGKALPIAIGVGIAVLAGLYFYLNSQY 157
>gi|449440502|ref|XP_004138023.1| PREDICTED: uncharacterized protein LOC101207574 [Cucumis sativus]
gi|449519978|ref|XP_004167011.1| PREDICTED: uncharacterized protein LOC101228372 [Cucumis sativus]
Length = 172
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 111/143 (77%), Gaps = 1/143 (0%)
Query: 27 NNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGY 86
N+ L ++R +LKSSF +P L + S Q ++A+A+PKFSMRVASKQAYICRDCGY
Sbjct: 31 NSMFLDSASNRLSLKSSFISP-LRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGY 89
Query: 87 IYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKA 146
IYN+R PFD+LPD YFCPVCGAPKRRFRPY V++ N+ VRKARK QIQ+DEAIGK
Sbjct: 90 IYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKV 149
Query: 147 LPIAIAVAAVALAGLYFYLNSAF 169
LPIA A+ VAL GLY YLNSAF
Sbjct: 150 LPIAAALGIVALVGLYLYLNSAF 172
>gi|307136004|gb|ADN33860.1| electron transporter [Cucumis melo subsp. melo]
Length = 172
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 92/143 (64%), Positives = 109/143 (76%), Gaps = 1/143 (0%)
Query: 27 NNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGY 86
N+ L ++R +LKSSF +P L + S Q ++A+A+PKFSMRVASKQAYICRDCGY
Sbjct: 31 NSMFLDSASNRLSLKSSFISP-LRKIPSLRRQNSVVAAASPKFSMRVASKQAYICRDCGY 89
Query: 87 IYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKA 146
IYN+R PFD+LPD YFCPVCGAPKRRFRPY V + N+ +RKARK QIQ+DEAIGK
Sbjct: 90 IYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVNKNDNEFDLRKARKAQIQKDEAIGKV 149
Query: 147 LPIAIAVAAVALAGLYFYLNSAF 169
LPIA A+ VAL GLY YLNS F
Sbjct: 150 LPIAAALGIVALVGLYLYLNSVF 172
>gi|224285226|gb|ACN40339.1| unknown [Picea sitchensis]
Length = 173
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 112/162 (69%), Gaps = 7/162 (4%)
Query: 8 RALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAP 67
RA T+N +L + GLR PADR+ALKS+FS + Q A+ P
Sbjct: 19 RASITSNKGNC--VLTQLQSGQGLRLPADRYALKSTFSNGGASVW-----PQTDGAAGLP 71
Query: 68 KFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
+ +MRV SKQAYICRDCGYIY +R PF++LPDN+FCPVCGAPKRRFRPY VTR ANDT
Sbjct: 72 RITMRVTSKQAYICRDCGYIYKDRTPFEKLPDNFFCPVCGAPKRRFRPYEDPVTRNANDT 131
Query: 128 AVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
A RKARKE +++DE IGKALP+A+ + V LA Y+YLNS F
Sbjct: 132 AARKARKEDLKKDEMIGKALPVAVVIGVVGLAATYYYLNSQF 173
>gi|116783095|gb|ABK22791.1| unknown [Picea sitchensis]
Length = 173
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 104/140 (74%), Gaps = 5/140 (3%)
Query: 30 GLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYN 89
GLR PADR+ALKS+FS + Q A+ P+ +MRV SKQAYICRDCGYIY
Sbjct: 39 GLRLPADRYALKSTFSNGGASVW-----PQTDGAAGLPRITMRVTSKQAYICRDCGYIYK 93
Query: 90 ERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKALPI 149
+R PF++LPDN+FCPVCGAPKRRFRPY VTR ANDTA RKARKE +++DE +GKALP+
Sbjct: 94 DRTPFEKLPDNFFCPVCGAPKRRFRPYEDPVTRNANDTAARKARKEDLKKDEMVGKALPV 153
Query: 150 AIAVAAVALAGLYFYLNSAF 169
A+ + V LA Y+YLNS F
Sbjct: 154 AVVIGVVGLAATYYYLNSQF 173
>gi|18423226|ref|NP_568749.1| rubredoxin-like protein [Arabidopsis thaliana]
gi|9758248|dbj|BAB08747.1| unnamed protein product [Arabidopsis thaliana]
gi|15292669|gb|AAK92703.1| unknown protein [Arabidopsis thaliana]
gi|19310697|gb|AAL85079.1| unknown protein [Arabidopsis thaliana]
gi|21555410|gb|AAM63852.1| unknown [Arabidopsis thaliana]
gi|332008638|gb|AED96021.1| rubredoxin-like protein [Arabidopsis thaliana]
Length = 154
Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 79/111 (71%), Positives = 94/111 (84%)
Query: 57 HQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
+++ L S+AP+FSMRV+SKQAYICRDCGYIYN+R PFD+LPDNYFCPVC APKRRFR Y
Sbjct: 42 NKKSLSKSSAPRFSMRVSSKQAYICRDCGYIYNDRTPFDKLPDNYFCPVCAAPKRRFRAY 101
Query: 117 TPAVTRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNS 167
P V++ ND VRKARK ++QRDEA+GKALPI IAV +ALA LYFY+NS
Sbjct: 102 MPDVSKNVNDKDVRKARKAELQRDEAVGKALPIGIAVGVLALAALYFYVNS 152
>gi|357464917|ref|XP_003602740.1| Rubredoxin [Medicago truncatula]
gi|217071148|gb|ACJ83934.1| unknown [Medicago truncatula]
gi|355491788|gb|AES72991.1| Rubredoxin [Medicago truncatula]
gi|388498600|gb|AFK37366.1| unknown [Medicago truncatula]
Length = 159
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/148 (65%), Positives = 113/148 (76%), Gaps = 2/148 (1%)
Query: 22 LAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYIC 81
L+PT LR ++ LK+SF + SL+LLL P Q LA P+F+MRVASKQAYIC
Sbjct: 14 LSPTATPTLLRPLSNPSTLKTSFFSRSLNLLLHPNQLQ--LAYGPPRFTMRVASKQAYIC 71
Query: 82 RDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDE 141
RDCGYIYNER FD+LPD YFCPVCGAPKRRF+PY V + AN+T VRKARK ++QRDE
Sbjct: 72 RDCGYIYNERTAFDKLPDKYFCPVCGAPKRRFKPYATDVNKKANETDVRKARKAELQRDE 131
Query: 142 AIGKALPIAIAVAAVALAGLYFYLNSAF 169
A+GKALPIA+AV V LAGLYFYLNS F
Sbjct: 132 AVGKALPIAVAVGVVVLAGLYFYLNSTF 159
>gi|217075380|gb|ACJ86050.1| unknown [Medicago truncatula]
Length = 159
Score = 175 bits (444), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 96/148 (64%), Positives = 113/148 (76%), Gaps = 2/148 (1%)
Query: 22 LAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYIC 81
L+PT LR ++ LK+SF + SL+LLL P Q LA P+F+MRVASKQAYIC
Sbjct: 14 LSPTATPTLLRPLSNPSTLKTSFFSRSLNLLLHPNQLQ--LAYGPPRFTMRVASKQAYIC 71
Query: 82 RDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDE 141
RDCGYIYNER FD+LPD YFCPVCGAPKRRF+PY V + AN+T VRKAR+ ++QRDE
Sbjct: 72 RDCGYIYNERTAFDKLPDKYFCPVCGAPKRRFKPYATDVNKKANETDVRKARRAELQRDE 131
Query: 142 AIGKALPIAIAVAAVALAGLYFYLNSAF 169
A+GKALPIA+AV V LAGLYFYLNS F
Sbjct: 132 AVGKALPIAVAVGVVVLAGLYFYLNSTF 159
>gi|297792413|ref|XP_002864091.1| hypothetical protein ARALYDRAFT_331490 [Arabidopsis lyrata subsp.
lyrata]
gi|297309926|gb|EFH40350.1| hypothetical protein ARALYDRAFT_331490 [Arabidopsis lyrata subsp.
lyrata]
Length = 153
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 89/102 (87%)
Query: 66 APKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAN 125
AP+FSMRV+SKQAYICRDCGYIYN+R PFD+LPDNYFCPVC APKRRFRPY P V++ N
Sbjct: 50 APRFSMRVSSKQAYICRDCGYIYNDRTPFDKLPDNYFCPVCAAPKRRFRPYMPDVSKNVN 109
Query: 126 DTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNS 167
D VRKARK ++QRDEA+GKALPIAIAV +ALA LY Y+N+
Sbjct: 110 DKDVRKARKAELQRDEAVGKALPIAIAVGVLALAALYLYVNN 151
>gi|212275029|ref|NP_001130730.1| hypothetical protein [Zea mays]
gi|194689968|gb|ACF79068.1| unknown [Zea mays]
gi|194707486|gb|ACF87827.1| unknown [Zea mays]
gi|414591477|tpg|DAA42048.1| TPA: hypothetical protein ZEAMMB73_699413 [Zea mays]
Length = 147
Score = 171 bits (433), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 102/128 (79%), Gaps = 5/128 (3%)
Query: 43 SFSAP-SLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNY 101
SFSAP SL L P + + A + +MRVASKQAYICRDCGYIYN+R PFD+L DNY
Sbjct: 23 SFSAPWSLRL----PAPARRRVATAARITMRVASKQAYICRDCGYIYNDRTPFDKLADNY 78
Query: 102 FCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGL 161
FCPVCGAPKRRFRPY PAV++ AN T RKARKE+++++E++GKALPIAI V +ALAGL
Sbjct: 79 FCPVCGAPKRRFRPYEPAVSKNANATDARKARKEELKKEESMGKALPIAIVVGIIALAGL 138
Query: 162 YFYLNSAF 169
YFYLN+ +
Sbjct: 139 YFYLNNVY 146
>gi|297734522|emb|CBI15769.3| unnamed protein product [Vitis vinifera]
Length = 99
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/97 (81%), Positives = 85/97 (87%)
Query: 71 MRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVR 130
MRVASKQAYICRDCGYIYN+R PF++LPD YFCPVCGAPKRRFRPY PAV + AND VR
Sbjct: 1 MRVASKQAYICRDCGYIYNDRTPFEKLPDGYFCPVCGAPKRRFRPYQPAVAKNANDMDVR 60
Query: 131 KARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNS 167
KARK QIQ+DEAIG+ALPIAI V ALAGLYFYLNS
Sbjct: 61 KARKTQIQKDEAIGRALPIAIVVGIAALAGLYFYLNS 97
>gi|242071163|ref|XP_002450858.1| hypothetical protein SORBIDRAFT_05g019800 [Sorghum bicolor]
gi|241936701|gb|EES09846.1| hypothetical protein SORBIDRAFT_05g019800 [Sorghum bicolor]
Length = 151
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 105/131 (80%), Gaps = 1/131 (0%)
Query: 40 LKSSFS-APSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLP 98
L+SSFS AP L +P ++ A+AA + +MRVASKQAYICRDCGYIYN+R PFD+L
Sbjct: 20 LRSSFSSAPCSLRLPAPARRRVARAAAAARITMRVASKQAYICRDCGYIYNDRTPFDKLA 79
Query: 99 DNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVAL 158
DNYFCPVCGAPKRRFRPY PAV + AN VRKARKEQ++++E++G+ LPIAI V +AL
Sbjct: 80 DNYFCPVCGAPKRRFRPYEPAVAKNANSIDVRKARKEQLKKEESMGQVLPIAIVVGVIAL 139
Query: 159 AGLYFYLNSAF 169
AGLYFYLN+ +
Sbjct: 140 AGLYFYLNNVY 150
>gi|115485721|ref|NP_001068004.1| Os11g0528500 [Oryza sativa Japonica Group]
gi|77551234|gb|ABA94031.1| Rubredoxin family protein, expressed [Oryza sativa Japonica Group]
gi|113645226|dbj|BAF28367.1| Os11g0528500 [Oryza sativa Japonica Group]
gi|125577347|gb|EAZ18569.1| hypothetical protein OsJ_34098 [Oryza sativa Japonica Group]
gi|215764992|dbj|BAG86689.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 151
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/109 (67%), Positives = 92/109 (84%), Gaps = 2/109 (1%)
Query: 63 ASAAPKFSMR--VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
++A+ + +MR VASKQAYICRDCGYIY++R PFD+LPD YFCPVCGAPKRRF+PY P V
Sbjct: 43 STASARITMRFGVASKQAYICRDCGYIYSDRTPFDKLPDKYFCPVCGAPKRRFKPYEPKV 102
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
+ AN T RKARKEQ+++DEA+G+ALPI IAV +ALAGL+FYLNS +
Sbjct: 103 AKNANATDARKARKEQLKKDEAVGQALPIGIAVGILALAGLFFYLNSVY 151
>gi|356518846|ref|XP_003528088.1| PREDICTED: uncharacterized protein LOC100786545 [Glycine max]
Length = 161
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 109/170 (64%), Gaps = 10/170 (5%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQ 60
M +H +S + +PPP LAP NAGLR + ALKSSF + SL+LLL P Q
Sbjct: 1 MAMHLQALTISLNTARSPPPSLAP-ATNAGLRPHFNPLALKSSFFSGSLNLLLHPNQQ-- 57
Query: 61 LLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFC-PVCGAPKRRFRPYTPA 119
L S A + SMRVASKQAYICRDCG + L ++C VCGAPK RFRPY PA
Sbjct: 58 -LTSGAARISMRVASKQAYICRDCGLASSR-----LLSHPFWCFAVCGAPKGRFRPYAPA 111
Query: 120 VTRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
V R AND VRKARK +I+++EAIG ALPIA A+ L GLYFYLN+ F
Sbjct: 112 VARNANDKDVRKARKSKIKKEEAIGNALPIAAALGIAVLVGLYFYLNNKF 161
>gi|125534601|gb|EAY81149.1| hypothetical protein OsI_36331 [Oryza sativa Indica Group]
Length = 101
Score = 159 bits (402), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 84/97 (86%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKA 132
VASKQAYICRDCGYIY++R PFD+LPD YFCPVCGAPKRRF+PY P V + AN T RKA
Sbjct: 5 VASKQAYICRDCGYIYSDRTPFDKLPDKYFCPVCGAPKRRFKPYEPKVAKNANATDARKA 64
Query: 133 RKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
RKEQ+++DEA+G+ALPI IAV +ALAGL+FYLNS +
Sbjct: 65 RKEQLKKDEAVGQALPIGIAVGILALAGLFFYLNSVY 101
>gi|357156603|ref|XP_003577514.1| PREDICTED: uncharacterized protein LOC100829949 [Brachypodium
distachyon]
Length = 154
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/139 (58%), Positives = 101/139 (72%), Gaps = 3/139 (2%)
Query: 34 PADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMR---VASKQAYICRDCGYIYNE 90
PA AL+S+F AP L + L +++A + +MR VASKQAYICRDCGYIY +
Sbjct: 16 PAAGPALRSAFCAPPLSVRLPGRATSMAASASAARITMRFGGVASKQAYICRDCGYIYKD 75
Query: 91 RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKALPIA 150
R PF++ D+YFCPVC APKRRFRPY P V + AN T RKARKEQ+++DE++GKALPI
Sbjct: 76 RTPFEKQSDDYFCPVCAAPKRRFRPYDPPVAKNANATDARKARKEQLKKDESVGKALPIG 135
Query: 151 IAVAAVALAGLYFYLNSAF 169
IAV VALA L+FYLNS +
Sbjct: 136 IAVGIVALAALFFYLNSVY 154
>gi|326493620|dbj|BAJ85271.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534284|dbj|BAJ89492.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 99/132 (75%), Gaps = 3/132 (2%)
Query: 40 LKSSFSAPSLHLLLSPPHQQQLLASA--APKFSMRVASKQAYICRDCGYIYNERKPFDQL 97
L+S+F AP L + L P + + +A+A +FS RV +KQAYICRDCGYIY ++ PF++L
Sbjct: 22 LRSAFYAPPLLVRLPAPGRARSVAAARITMRFS-RVQTKQAYICRDCGYIYKDKTPFEKL 80
Query: 98 PDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVA 157
D+Y+CPVC APKRRFRPY P V + AN T RKARKEQ+++DE +GKALPI IAV VA
Sbjct: 81 SDDYYCPVCAAPKRRFRPYEPPVAKNANATDARKARKEQLKKDETVGKALPIGIAVGIVA 140
Query: 158 LAGLYFYLNSAF 169
LA L+ YLNS +
Sbjct: 141 LAALFLYLNSVY 152
>gi|224119862|ref|XP_002318181.1| predicted protein [Populus trichocarpa]
gi|222858854|gb|EEE96401.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 155 bits (391), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/159 (55%), Positives = 100/159 (62%), Gaps = 27/159 (16%)
Query: 9 ALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLL-SPPHQQQLLASAAP 67
+L T +S P LL+ TGNN GLR P DRFALKSSF +PSLHLL+ S HQQQ LA AAP
Sbjct: 30 SLPATKTSPSPCLLSLTGNNVGLRGPTDRFALKSSFFSPSLHLLITSYKHQQQPLAPAAP 89
Query: 68 KFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
+FSMR A+KQAYICRDCG RFR Y PAV + NDT
Sbjct: 90 RFSMRAAAKQAYICRDCG--------------------------RFREYMPAVAKNDNDT 123
Query: 128 AVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYLN 166
VRKARK QIQRDEAIG+ALPIA+ V VA + +N
Sbjct: 124 DVRKARKTQIQRDEAIGRALPIAVVVGVVACLKILKVVN 162
>gi|302772853|ref|XP_002969844.1| hypothetical protein SELMODRAFT_146861 [Selaginella moellendorffii]
gi|300162355|gb|EFJ28968.1| hypothetical protein SELMODRAFT_146861 [Selaginella moellendorffii]
Length = 159
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 96/143 (67%), Gaps = 9/143 (6%)
Query: 26 GNNAGLR-RPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDC 84
G + +R R DR+ALKSSF L P Q AA + SMRVA+ +AYIC DC
Sbjct: 21 GTRSSIRLRGTDRWALKSSFFNAGSRL---APAQTM----AASRISMRVATNKAYICSDC 73
Query: 85 GYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQR-DEAI 143
GYIYN+R PF +LP++Y CPVC APKRRF+PY V R AN T VRKARKEQ+++ + +
Sbjct: 74 GYIYNDRTPFSKLPNDYSCPVCLAPKRRFKPYGEPVARNANSTDVRKARKEQLKKANSNL 133
Query: 144 GKALPIAIAVAAVALAGLYFYLN 166
G ALP+AIAV LAG YFYLN
Sbjct: 134 GSALPVAIAVGLAILAGTYFYLN 156
>gi|302806896|ref|XP_002985179.1| hypothetical protein SELMODRAFT_424320 [Selaginella moellendorffii]
gi|300147007|gb|EFJ13673.1| hypothetical protein SELMODRAFT_424320 [Selaginella moellendorffii]
Length = 107
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Query: 65 AAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
AA + SMRVA+ +AYIC DCGYIYN+R PF +LP++Y CPVC APKRRF+PY V R A
Sbjct: 2 AASRISMRVATNKAYICSDCGYIYNDRTPFSKLPNDYSCPVCLAPKRRFKPYGEPVARNA 61
Query: 125 NDTAVRKARKEQIQR-DEAIGKALPIAIAVAAVALAGLYFYLNSAF 169
N T VRKARKEQ+++ + +G ALP+AIAV LAG YFYLN +
Sbjct: 62 NSTDVRKARKEQLKKANSNLGSALPVAIAVGLAILAGTYFYLNIQY 107
>gi|168001731|ref|XP_001753568.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695447|gb|EDQ81791.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 132
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/137 (51%), Positives = 93/137 (67%), Gaps = 10/137 (7%)
Query: 38 FALKSSFS----APSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKP 93
ALKSSF+ A S +++ + L SA P+ +MR A+K AYIC+DCGYIYN+++P
Sbjct: 1 MALKSSFNNGGRAFSAAVIIP-----EGLGSAPPRITMRAAAKTAYICQDCGYIYNDKQP 55
Query: 94 FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQR-DEAIGKALPIAIA 152
F LP +Y CPVC APKRRF+ Y V R AND AVRKARKE++++ + A G+ALPI IA
Sbjct: 56 FTSLPTDYSCPVCLAPKRRFKVYDAPVARNANDLAVRKARKEELKKTNAAFGQALPIGIA 115
Query: 153 VAAVALAGLYFYLNSAF 169
V + + G + YLNS
Sbjct: 116 VGILGIVGTFLYLNSTL 132
>gi|356565717|ref|XP_003551084.1| PREDICTED: uncharacterized protein LOC100800385 [Glycine max]
Length = 132
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 1 MGLHAPTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQ 60
M + APT +L+ S P LA N AG+R ALKSSF + SL+LLL P QQ
Sbjct: 33 MHMQAPTISLNIARS---PSSLAAAAN-AGMRPHLIPMALKSSFFSGSLNLLLHP--MQQ 86
Query: 61 LLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCP 104
L S AP+ SMRVASKQAYICRDCGYIYN+R PF++L D +FCP
Sbjct: 87 YLTSGAPRISMRVASKQAYICRDCGYIYNDRTPFEKLADKFFCP 130
>gi|387169502|gb|AFJ66163.1| hypothetical protein 11M19.6 [Arabidopsis halleri]
Length = 91
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%)
Query: 105 VCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFY 164
+C APKRRFRPY P V++ ND VRKARK ++QRDEA+GKALPIAIAV +ALA LYFY
Sbjct: 27 MCAAPKRRFRPYMPDVSKNVNDKDVRKARKAELQRDEAVGKALPIAIAVGVLALAALYFY 86
Query: 165 LNS 167
+N+
Sbjct: 87 VNN 89
>gi|357464919|ref|XP_003602741.1| Rubredoxin [Medicago truncatula]
gi|355491789|gb|AES72992.1| Rubredoxin [Medicago truncatula]
Length = 122
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Query: 22 LAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYIC 81
L+PT LR ++ LK+SF + SL+LLL P Q LA P+F+MRVASKQAYIC
Sbjct: 14 LSPTATPTLLRPLSNPSTLKTSFFSRSLNLLLHPNQLQ--LAYGPPRFTMRVASKQAYIC 71
Query: 82 RDCGYIYNERKPFDQLPDNYFCP 104
RDCGYIYNER FD+LPD YFCP
Sbjct: 72 RDCGYIYNERTAFDKLPDKYFCP 94
>gi|387169543|gb|AFJ66203.1| hypothetical protein 7G9.9 [Boechera stricta]
Length = 131
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 57/110 (51%), Gaps = 31/110 (28%)
Query: 66 APKFSMRVASKQAYICRDCGYIYNERKPFDQLP-DNYFC--------------------- 103
AP+FSMRV+SKQAYICRDCG + L YF
Sbjct: 22 APRFSMRVSSKQAYICRDCGSVAIILSSSVSLTYKTYFIYLFLLILQYVVALTSFVGIVF 81
Query: 104 ---------PVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIG 144
VC APKRRFRPYTP V++ ND VRKARK ++QRDEAIG
Sbjct: 82 GFNGFKVLFAVCAAPKRRFRPYTPDVSKNVNDKDVRKARKAELQRDEAIG 131
>gi|307110985|gb|EFN59220.1| hypothetical protein CHLNCDRAFT_138180 [Chlorella variabilis]
Length = 138
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 3/71 (4%)
Query: 70 SMRVASKQAYICRDCGYIYN-ERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTA 128
S R A+ +AYIC DCGYIY+ F++LP++Y CPVC APKRRF+PYT R ND
Sbjct: 32 SARAATSKAYICVDCGYIYDGSDGAFEKLPNSYRCPVCSAPKRRFKPYTGGTGR--NDAK 89
Query: 129 VRKARKEQIQR 139
AR +++QR
Sbjct: 90 SMNARYDKLQR 100
>gi|302855399|ref|XP_002959194.1| hypothetical protein VOLCADRAFT_108517 [Volvox carteri f.
nagariensis]
gi|300255424|gb|EFJ39731.1| hypothetical protein VOLCADRAFT_108517 [Volvox carteri f.
nagariensis]
Length = 144
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 56/100 (56%), Gaps = 12/100 (12%)
Query: 75 SKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARK 134
+K AY+C DCGY+Y+E PF+Q+ +Y CPVCGAPKRRF+ R ND ARK
Sbjct: 45 AKAAYVCLDCGYLYDESTPFEQVK-SYSCPVCGAPKRRFKELKNNSLRN-NDPKSMVARK 102
Query: 135 EQIQRDEAIGKA---------LPIAIAVAAVALAGLYFYL 165
E++ RD+ + + IA A VA GL YL
Sbjct: 103 EKL-RDQIVAEGGNPDEGQNEFLIATGAAIVATLGLLAYL 141
>gi|168067592|ref|XP_001785696.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662666|gb|EDQ49491.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 174
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
V+ + AY+C+DCGY+Y+E KPF+ +PD Y CP C APK RF
Sbjct: 99 VSERMAYVCQDCGYVYDEEKPFEDVPDEYNCPQCAAPKTRF 139
>gi|302787068|ref|XP_002975304.1| hypothetical protein SELMODRAFT_103058 [Selaginella moellendorffii]
gi|302822865|ref|XP_002993088.1| hypothetical protein SELMODRAFT_136485 [Selaginella moellendorffii]
gi|300139088|gb|EFJ05836.1| hypothetical protein SELMODRAFT_136485 [Selaginella moellendorffii]
gi|300156878|gb|EFJ23505.1| hypothetical protein SELMODRAFT_103058 [Selaginella moellendorffii]
Length = 195
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 26/108 (24%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCGY+Y KPF++ PD + CP C APK+RF Y P
Sbjct: 103 APPRFGRKLTEAQKARATHICLDCGYVYTLSKPFEEQPDGFLCPQCRAPKKRFSKYDPET 162
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAV----AAVALAGLYFY 164
R G ALPI++ + A+A+ GL Y
Sbjct: 163 GRAVG------------------GGALPISVILGVLAGALAVGGLVVY 192
>gi|168000681|ref|XP_001753044.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695743|gb|EDQ82085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 177
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
V+++ AY+C+DCGY+Y+E PF+ +PD Y CP C APK RF
Sbjct: 102 VSNRMAYVCQDCGYVYDEETPFEDVPDEYNCPQCKAPKTRF 142
>gi|255557945|ref|XP_002520001.1| electron transporter, putative [Ricinus communis]
gi|223540765|gb|EEF42325.1| electron transporter, putative [Ricinus communis]
Length = 273
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 47/101 (46%), Gaps = 24/101 (23%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCGYIY +K FD+ PD Y CP C APK+RF Y
Sbjct: 181 APPRFGRKLTDTQKARATHICLDCGYIYTAQKSFDEQPDTYVCPQCRAPKKRFAKY---- 236
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVAAVALAG 160
+ +AIG L PI + + VA G
Sbjct: 237 ---------------DVNTGKAIGGGLPPIGVIIGLVAGVG 262
>gi|356497371|ref|XP_003517534.1| PREDICTED: uncharacterized protein LOC100785369 [Glycine max]
Length = 274
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 24/101 (23%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCGYIY +KPFD+ PD Y CP C APK+RF Y
Sbjct: 182 APPRFGRKLTETQKARATHICLDCGYIYTLQKPFDEQPDTYGCPQCQAPKKRFARY---- 237
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVAAVALAG 160
+ +AIG L PI + + +A G
Sbjct: 238 ---------------DVNTGKAIGGGLPPIGVIIGLLAGVG 263
>gi|413917307|gb|AFW57239.1| hypothetical protein ZEAMMB73_362013 [Zea mays]
Length = 346
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 25/103 (24%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q ++C DCGYIY KPFD+ PD+Y CP C APK+RF Y A
Sbjct: 254 APPRFGRKLTDSQKERATHVCLDCGYIYFLPKPFDEQPDDYGCPQCNAPKKRFARYDAAT 313
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVA-AVALAGL 161
+ AIG AL PIA+ V+ + +AG+
Sbjct: 314 GK-------------------AIGGALPPIAVIVSLVIGIAGV 337
>gi|413917306|gb|AFW57238.1| hypothetical protein ZEAMMB73_362013 [Zea mays]
Length = 345
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 25/103 (24%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q ++C DCGYIY KPFD+ PD+Y CP C APK+RF Y A
Sbjct: 253 APPRFGRKLTDSQKERATHVCLDCGYIYFLPKPFDEQPDDYGCPQCNAPKKRFARYDAAT 312
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVA-AVALAGL 161
+ AIG AL PIA+ V+ + +AG+
Sbjct: 313 GK-------------------AIGGALPPIAVIVSLVIGIAGV 336
>gi|388522807|gb|AFK49465.1| unknown [Lotus japonicus]
Length = 261
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 24/101 (23%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCG+IY +KPF++ P++Y CP C APK+RF PY
Sbjct: 169 APPRFGRKLTDAQKARATHICLDCGFIYTLQKPFEEQPESYICPQCQAPKKRFSPY---- 224
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVAAVALAG 160
+ AIG L PI + + VA G
Sbjct: 225 ---------------DVNTGRAIGGGLPPIGVIIGLVAGLG 250
>gi|308081222|ref|NP_001183375.1| uncharacterized protein LOC100501788 [Zea mays]
gi|238011096|gb|ACR36583.1| unknown [Zea mays]
Length = 261
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 25/103 (24%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q ++C DCGYIY KPFD+ PD+Y CP C APK+RF Y A
Sbjct: 169 APPRFGRKLTDSQKERATHVCLDCGYIYFLPKPFDEQPDDYGCPQCNAPKKRFARYDAAT 228
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVA-AVALAGL 161
+ AIG AL PIA+ V+ + +AG+
Sbjct: 229 GK-------------------AIGGALPPIAVIVSLVIGIAGV 252
>gi|449451817|ref|XP_004143657.1| PREDICTED: uncharacterized protein LOC101215685 [Cucumis sativus]
gi|449529931|ref|XP_004171951.1| PREDICTED: uncharacterized LOC101215685 [Cucumis sativus]
Length = 276
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 24/101 (23%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCGYIY KPFD+ PD Y CP C APK+RF Y
Sbjct: 184 APPRFGRKLTDAQKAKATHICLDCGYIYTLSKPFDEQPDGYACPQCIAPKKRFAKY---- 239
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGL 161
+ +A+G LP I V A +AG+
Sbjct: 240 ---------------DVSTGKAVGGGLP-PIGVIAGLVAGI 264
>gi|412986535|emb|CCO14961.1| nitrite reductase [Bathycoccus prasinos]
Length = 1060
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/42 (57%), Positives = 29/42 (69%)
Query: 72 RVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ KQ +IC CGYIY+E KPFD LP +Y CP C APK +F
Sbjct: 731 KALGKQTHICTGCGYIYSEEKPFDSLPADYVCPSCSAPKSKF 772
>gi|308805382|ref|XP_003080003.1| P0577B11.138 gene product (ISS) [Ostreococcus tauri]
gi|116058462|emb|CAL53651.1| P0577B11.138 gene product (ISS) [Ostreococcus tauri]
Length = 230
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 22/110 (20%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A PKF ++++ Q ++IC DCGY+Y PF + P +Y CP C APK RF PY
Sbjct: 138 APPKFGRKLSAAQKERASHICVDCGYVYTLPTPFGEQPKSYVCPQCNAPKSRFAPY---- 193
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVA-LAGLYFYLNSAF 169
+ R + G + PI V+ VA L G+ ++L F
Sbjct: 194 -------------DVETGRAKGGGLSTPIITVVSTVAGLGGMVYFLKDMF 230
>gi|346466827|gb|AEO33258.1| hypothetical protein [Amblyomma maculatum]
Length = 255
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCG+IY +KPFD+ PD+Y CP C APK+RF Y A
Sbjct: 150 APPRFGRKLTEAQKARATHICLDCGFIYTLQKPFDEQPDSYACPQCRAPKKRFAGYDAAT 209
Query: 121 TR 122
+
Sbjct: 210 GK 211
>gi|356538859|ref|XP_003537918.1| PREDICTED: uncharacterized protein LOC100816088 [Glycine max]
Length = 274
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 24/101 (23%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCGYIY +K FD+ PD Y CP C APK+RF Y
Sbjct: 182 APPRFGRKLTETQKARATHICLDCGYIYTLQKSFDEQPDTYGCPQCQAPKKRFARY---- 237
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVAAVALAG 160
+ +AIG L PI + + +A G
Sbjct: 238 ---------------DVNTGKAIGGGLPPIGVIIGLLAGVG 263
>gi|297807735|ref|XP_002871751.1| rubredoxin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317588|gb|EFH48010.1| rubredoxin family protein [Arabidopsis lyrata subsp. lyrata]
Length = 269
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 24/101 (23%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCG+IY K FD+ PD Y CP C APK+RF Y
Sbjct: 177 APPRFGRKLTETQKASTTHICLDCGFIYTLPKSFDEQPDTYVCPQCIAPKKRFAKY---- 232
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGL 161
+ +AIG LP I V LAGL
Sbjct: 233 ---------------DVNTGKAIGGGLP-PIGVIVGLLAGL 257
>gi|242078287|ref|XP_002443912.1| hypothetical protein SORBIDRAFT_07g004240 [Sorghum bicolor]
gi|241940262|gb|EES13407.1| hypothetical protein SORBIDRAFT_07g004240 [Sorghum bicolor]
Length = 262
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 25/103 (24%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCG+IY KPF++ PD Y CP C APK+RF Y A
Sbjct: 170 APPRFGRKLTDAQKERATHICLDCGFIYFLPKPFEEQPDEYGCPQCNAPKKRFAKYDAAT 229
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVA-AVALAGL 161
+ AIG AL PIA+ ++ + +AG+
Sbjct: 230 GK-------------------AIGGALPPIAVIISFVIGIAGV 253
>gi|255637964|gb|ACU19298.1| unknown [Glycine max]
Length = 274
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 24/101 (23%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCGYIY +K FD+ PD Y CP C APK+RF Y
Sbjct: 182 APPRFGRKLTETQKARATHICLDCGYIYPLQKSFDEQPDTYGCPQCQAPKKRFARY---- 237
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVAAVALAG 160
+ +AIG L PI + + +A G
Sbjct: 238 ---------------DVNTGKAIGGGLPPIGVIIGLLAGVG 263
>gi|18418200|ref|NP_568342.1| rubredoxin family protein [Arabidopsis thaliana]
gi|10177062|dbj|BAB10504.1| unnamed protein product [Arabidopsis thaliana]
gi|14334892|gb|AAK59624.1| unknown protein [Arabidopsis thaliana]
gi|24030464|gb|AAN41384.1| unknown protein [Arabidopsis thaliana]
gi|332005008|gb|AED92391.1| rubredoxin family protein [Arabidopsis thaliana]
Length = 271
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 24/101 (23%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCG+IY K FD+ PD Y CP C APK+RF Y
Sbjct: 179 APPRFGRKLTETQKARATHICLDCGFIYTLPKSFDEQPDTYVCPQCIAPKKRFAKY---- 234
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGL 161
+ +AIG LP I V LAGL
Sbjct: 235 ---------------DVNTGKAIGGGLP-PIGVIVGLLAGL 259
>gi|115474927|ref|NP_001061060.1| Os08g0162600 [Oryza sativa Japonica Group]
gi|28564642|dbj|BAC57824.1| unknown protein [Oryza sativa Japonica Group]
gi|37806461|dbj|BAC99896.1| unknown protein [Oryza sativa Japonica Group]
gi|113623029|dbj|BAF22974.1| Os08g0162600 [Oryza sativa Japonica Group]
gi|215687278|dbj|BAG91843.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765630|dbj|BAG87327.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200518|gb|EEC82945.1| hypothetical protein OsI_27923 [Oryza sativa Indica Group]
gi|222639960|gb|EEE68092.1| hypothetical protein OsJ_26144 [Oryza sativa Japonica Group]
Length = 260
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 25/103 (24%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCGYIY KPF++ PD Y CP C APK+RF Y
Sbjct: 168 APPRFGRKLTESQKARATHICLDCGYIYFLPKPFEEQPDEYGCPQCNAPKKRFAKYDAET 227
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVA-AVALAGL 161
R AIG AL PI + V+ + +AG+
Sbjct: 228 GR-------------------AIGGALPPITVIVSLIIGIAGV 251
>gi|302805867|ref|XP_002984684.1| hypothetical protein SELMODRAFT_445973 [Selaginella moellendorffii]
gi|300147666|gb|EFJ14329.1| hypothetical protein SELMODRAFT_445973 [Selaginella moellendorffii]
Length = 136
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
V + AYIC+DCGY+Y++ F PD+Y CPVC APK RF+
Sbjct: 78 VGKRIAYICQDCGYVYDQETLFQDQPDSYNCPVCSAPKNRFK 119
>gi|302794013|ref|XP_002978771.1| hypothetical protein SELMODRAFT_443945 [Selaginella moellendorffii]
gi|300153580|gb|EFJ20218.1| hypothetical protein SELMODRAFT_443945 [Selaginella moellendorffii]
Length = 136
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
V + AYIC+DCGY+Y++ F PD+Y CPVC APK RF+
Sbjct: 78 VGKRIAYICQDCGYVYDQETLFQDQPDSYNCPVCSAPKNRFK 119
>gi|159465685|ref|XP_001691053.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279739|gb|EDP05499.1| predicted protein [Chlamydomonas reinhardtii]
Length = 232
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 27/39 (69%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
++IC DCGYIY + PFD NY CP C APKRRF PY
Sbjct: 156 SHICVDCGYIYCDSTPFDDTAANYRCPQCNAPKRRFVPY 194
>gi|357144881|ref|XP_003573446.1| PREDICTED: uncharacterized protein LOC100831452 [Brachypodium
distachyon]
Length = 257
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
A P+F ++ Q +IC DCGYIY KPF++ PD Y CP C APK+RF Y
Sbjct: 165 APPRFGRKLTDSQKARATHICLDCGYIYFLPKPFEEQPDEYGCPQCNAPKKRFVQY 220
>gi|159488562|ref|XP_001702276.1| rubredoxin-like protein [Chlamydomonas reinhardtii]
gi|158271253|gb|EDO97077.1| rubredoxin-like protein [Chlamydomonas reinhardtii]
Length = 142
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY-TPAVTRGANDTAVRKARK 134
K AY+C DCGY+Y+E PF+++ Y CPVC APKRRF+ +TR ND RK
Sbjct: 43 KSAYVCLDCGYLYDEPTPFEEV-KAYVCPVCNAPKRRFKELRGNKLTR--NDPKSMVTRK 99
Query: 135 EQIQR---------DEAIGKALPIAIAVAAVALAGLYFYLN 166
E ++ DE + L + A ALA L YLN
Sbjct: 100 EALRAQVEADGGNPDEGQNEFLIFSGLTAVAALAFLA-YLN 139
>gi|168039211|ref|XP_001772092.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676693|gb|EDQ63173.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 198
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q ++C DCGYIY K FD P+++ CP C APK+RF Y P
Sbjct: 106 APPRFGRKLTDAQKARATHVCLDCGYIYTLSKSFDDQPEDWQCPQCQAPKKRFAGYDPET 165
Query: 121 TR 122
R
Sbjct: 166 GR 167
>gi|302833209|ref|XP_002948168.1| hypothetical protein VOLCADRAFT_120585 [Volvox carteri f.
nagariensis]
gi|300266388|gb|EFJ50575.1| hypothetical protein VOLCADRAFT_120585 [Volvox carteri f.
nagariensis]
Length = 231
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
+IC DCGYIY ++ PF++ P NY CP C APKRRF Y
Sbjct: 156 HICVDCGYIYCDKVPFEETPANYRCPQCNAPKRRFVEY 193
>gi|388504996|gb|AFK40564.1| unknown [Medicago truncatula]
Length = 273
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
A P+F ++ Q +IC DCGYIY K FD PD Y CP C APK+RF Y
Sbjct: 180 APPRFGRKLTETQKARATHICLDCGYIYFLPKSFDDQPDTYSCPQCQAPKKRFAEY 235
>gi|217074094|gb|ACJ85407.1| unknown [Medicago truncatula]
Length = 273
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
A P+F ++ Q +IC DCGYIY K FD PD Y CP C APK+RF Y
Sbjct: 180 APPRFGRKLTETQKARATHICLDCGYIYFLPKSFDDQPDTYSCPQCQAPKKRFAEY 235
>gi|359489916|ref|XP_002275188.2| PREDICTED: uncharacterized protein LOC100263114 [Vitis vinifera]
gi|297737366|emb|CBI26567.3| unnamed protein product [Vitis vinifera]
Length = 274
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
A P+F ++ Q +IC DCG+IY KPF++ D Y CP C APK+RF Y
Sbjct: 182 APPRFGRKLTEAQKARATHICLDCGFIYTLTKPFEEQSDAYVCPQCSAPKKRFARY 237
>gi|302829845|ref|XP_002946489.1| hypothetical protein VOLCADRAFT_103073 [Volvox carteri f.
nagariensis]
gi|300268235|gb|EFJ52416.1| hypothetical protein VOLCADRAFT_103073 [Volvox carteri f.
nagariensis]
Length = 119
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 75 SKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA--NDTAVRKA 132
+ Q IC DCGYIY+ + F LP +Y CPVC +PK RF+ Y +G N A K
Sbjct: 53 TTQYMICIDCGYIYDGSQEFKSLPGSYKCPVCSSPKNRFKAYKGTDVKGKPNNAPATMKK 112
Query: 133 RKEQIQ 138
RK+ Q
Sbjct: 113 RKDAKQ 118
>gi|388505026|gb|AFK40579.1| unknown [Medicago truncatula]
Length = 273
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
A P+F ++ Q +IC DCGYIY K FD PD Y CP C APK+RF Y
Sbjct: 180 APPRFGRKLTETQKARATHICLDCGYIYFLPKSFDDQPDTYSCPQCQAPKKRFAEY 235
>gi|326490087|dbj|BAJ94117.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506104|dbj|BAJ91291.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508706|dbj|BAJ95875.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527811|dbj|BAJ88978.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 25/103 (24%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F +++ Q +IC DCGYIY KPF++ P Y CP C APK+RF Y
Sbjct: 167 APPRFGRKLSDSQKARATHICLDCGYIYFLPKPFEEQPGEYGCPQCNAPKKRFARY---- 222
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALP--IAIAVAAVALAGL 161
++ + IG ALP I + +AG+
Sbjct: 223 ---------------NVESGKPIGGALPPLTVIVSLVIGIAGI 250
>gi|224146096|ref|XP_002325879.1| predicted protein [Populus trichocarpa]
gi|222862754|gb|EEF00261.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 24/101 (23%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++ Q +IC DCG+IY +K FD+ P+ Y CP C APK+RF Y
Sbjct: 183 APPRFGRKLTEAQKARATHICIDCGFIYTLQKSFDEQPEAYVCPQCRAPKKRFARY---- 238
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKAL-PIAIAVAAVALAG 160
+ A+G L PI + + VA G
Sbjct: 239 ---------------DVNTGRAVGGGLPPIGVIIGLVAGIG 264
>gi|326509473|dbj|BAJ91653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 224
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 25/103 (24%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F +++ Q +IC DCGYIY KPF++ P Y CP C APK+RF Y
Sbjct: 132 APPRFGRKLSDSQKARATHICLDCGYIYFLPKPFEEQPGEYGCPQCNAPKKRFARYN--- 188
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALP--IAIAVAAVALAGL 161
++ + IG ALP I + +AG+
Sbjct: 189 ----------------VESGKPIGGALPPLTVIVSLVIGIAGI 215
>gi|357481187|ref|XP_003610879.1| hypothetical protein MTR_5g008050 [Medicago truncatula]
gi|355512214|gb|AES93837.1| hypothetical protein MTR_5g008050 [Medicago truncatula]
Length = 275
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 65 AAPKFSMRVASKQ------AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
A P+F ++ Q +IC DCGYIY K FD PD Y CP C APK+RF Y
Sbjct: 180 APPRFGRKLTETQKARARATHICLDCGYIYFLPKSFDDQPDTYSCPQCQAPKKRFAEY 237
>gi|159474470|ref|XP_001695348.1| rubredoxin [Chlamydomonas reinhardtii]
gi|158275831|gb|EDP01606.1| rubredoxin [Chlamydomonas reinhardtii]
Length = 117
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 80 ICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA--NDTAVRKARKEQI 137
IC DCGYIY+ + F LP +Y CPVC +PK RF+ Y +G N A K RK+
Sbjct: 56 ICIDCGYIYDGGQEFKSLPGSYKCPVCSSPKSRFKVYKGTDVKGKPNNAPATMKKRKDAK 115
Query: 138 Q 138
Q
Sbjct: 116 Q 116
>gi|145347688|ref|XP_001418294.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578523|gb|ABO96587.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 188
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A PKF ++ + Q ++IC DCGY+Y F + P +Y CP C APK RF PY
Sbjct: 100 APPKFGRKLTAAQKERASHICVDCGYVYTLPTAFSEQPKSYICPQCNAPKSRFAPY---- 155
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALP-IAIAVAAVALAGLYFYL 165
+ R + G + P I +A + L G+ F L
Sbjct: 156 -------------DVETGRAKGGGLSTPLITVASTVIGLGGIAFLL 188
>gi|326518228|dbj|BAK07366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 281
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 28/109 (25%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F +++ Q +IC DCGYIY KPF++ P Y CP C APK+RF Y
Sbjct: 189 APPRFGRKLSDSQKARATHICLDCGYIYFLPKPFEEQPGEYGCPQCNAPKKRFARYN--- 245
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALP-----IAIAVAAVALAGLYFY 164
++ + IG ALP +++ + + L Y
Sbjct: 246 ----------------VESGKPIGGALPPLTVIVSLVIGIAGIGALLVY 278
>gi|409197356|ref|ZP_11226019.1| hypothetical protein MsalJ2_09956 [Marinilabilia salmonicolor JCM
21150]
Length = 223
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 67 PKFSMRVASKQAYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRFR 114
P+ S + Y C+ CG++Y K PF++LPD++ CPVCGAPK +F+
Sbjct: 171 PESSDTKKTGDKYECQQCGFVYENEKEGTPFEELPDDWKCPVCGAPKSKFK 221
>gi|307102930|gb|EFN51196.1| hypothetical protein CHLNCDRAFT_141372 [Chlorella variabilis]
Length = 250
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 68 KFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+F R+ + Q ++C DCGYIY + PF+ P +Y CP C APKRRF
Sbjct: 158 RFGRRLTAAQKARATHLCVDCGYIYCDETPFEATPTDYRCPQCNAPKRRF 207
>gi|308808434|ref|XP_003081527.1| Nii, plastid-targeted nitrite reductase apoenzyme (IC)
[Ostreococcus tauri]
gi|116059991|emb|CAL56050.1| Nii, plastid-targeted nitrite reductase apoenzyme (IC)
[Ostreococcus tauri]
Length = 986
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 72 RVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ K +IC CGYIY E K F++LP +Y CP C APK +F
Sbjct: 655 KAMGKATHICTACGYIYQETKKFNELPADYVCPSCSAPKTKF 696
>gi|255081238|ref|XP_002507841.1| predicted protein [Micromonas sp. RCC299]
gi|226523117|gb|ACO69099.1| predicted protein [Micromonas sp. RCC299]
Length = 238
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 19/105 (18%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++++ Q +IC DCGY+Y PF + +Y CP C AP+ RF Y P
Sbjct: 145 APPRFGKKLSAAQKERATHICVDCGYVYTLPTPFKEQGKDYKCPQCNAPRSRFANYDPET 204
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALPIAIAVAAVALAGLYFYL 165
+ + A A I A + LAG+ +YL
Sbjct: 205 GKASGGAA---------------SNAPLITTAATVLGLAGMGYYL 234
>gi|219115209|ref|XP_002178400.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410135|gb|EEC50065.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 117
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 47 PSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNER-KPFDQLPDNYFCPV 105
PS + S P QL PK S Y+C DCGY++ + K + LPD+Y CP
Sbjct: 34 PSTAAVRSGPSSTQLYFFGQPKDD---GSPGDYLCPDCGYVFTKGPKAWAALPDSYSCPP 90
Query: 106 CGAPKRRFR 114
CGAPKRRF+
Sbjct: 91 CGAPKRRFK 99
>gi|116779729|gb|ABK21407.1| unknown [Picea sitchensis]
Length = 262
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
A P+F ++ Q +IC DCGYIY K FD+ D++ C C APK+RF Y
Sbjct: 170 APPRFGRKLTEAQKARATHICLDCGYIYTLTKSFDEQRDDFVCAQCSAPKKRFARY 225
>gi|359409763|ref|ZP_09202228.1| flavin reductase domain protein FMN-binding [Clostridium sp.
DL-VIII]
gi|357168647|gb|EHI96821.1| flavin reductase domain protein FMN-binding [Clostridium sp.
DL-VIII]
Length = 214
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 77 QAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
+ Y+C CGY Y+ PF++LPD+Y CP+CG PK F+
Sbjct: 175 EKYVCSICGYEYSGDIPFEELPDDYTCPICGQPKSVFK 212
>gi|412993141|emb|CCO16674.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 26/108 (24%)
Query: 65 AAPKFSMRVASKQA----YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A PKF ++++ QA +IC DCG++Y PF Y CP C AP+ RF Y P
Sbjct: 112 APPKFGRKMSAAQAERASHICVDCGFVYALPTPFADQDKEYSCPQCSAPRSRFAKYDPET 171
Query: 121 TRGANDTAVRKARKEQIQRDEAIGKALP---IAIAVAAVALAGLYFYL 165
R A+G L + A V LAG+ +Y+
Sbjct: 172 GR-------------------AVGGGLSTPLVTTAATVVGLAGIAYYV 200
>gi|452819873|gb|EME26924.1| rubredoxin family protein [Galdieria sulphuraria]
Length = 257
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 4/52 (7%)
Query: 79 YICRDCGYIY--NERKPFDQLPDNYFCPVCGAPKRRF--RPYTPAVTRGAND 126
++C DCGY+Y + F+ LPDN+ CP+CG+PKRRF + V R ++D
Sbjct: 181 WVCMDCGYVYPDDASIAFENLPDNWRCPLCGSPKRRFFKKQGNKVVARMSDD 232
>gi|339022072|ref|ZP_08646043.1| rubredoxin-type Fe(Cys)4 protein [Acetobacter tropicalis NBRC
101654]
gi|338750920|dbj|GAA09347.1| rubredoxin-type Fe(Cys)4 protein [Acetobacter tropicalis NBRC
101654]
Length = 447
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Query: 75 SKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPA 119
S + YIC CG+IY+E K F+ +PD+++CP+CG K F Y+P+
Sbjct: 13 SVRTYICTVCGWIYDEAKGDPDSGIAPGTRFEDIPDDWYCPLCGVTKADFELYSPS 68
>gi|384251307|gb|EIE24785.1| hypothetical protein COCSUDRAFT_14019, partial [Coccomyxa
subellipsoidea C-169]
Length = 195
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 67 PKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTR 122
P+F ++ S Q +IC DCG+IY + PF++L +++ CP C A K+RF Y A +
Sbjct: 100 PRFGRKLTSAQKELATHICVDCGWIYCAKTPFEELDESFRCPQCSAYKKRFAKYDVATGK 159
>gi|384207685|ref|YP_005593405.1| flavin reductase like domain-containing protein [Brachyspira
intermedia PWS/A]
gi|343385335|gb|AEM20825.1| flavin reductase like domain containing protein [Brachyspira
intermedia PWS/A]
Length = 265
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 74 ASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKAR 133
++K Y C+ CG+ Y PF+ LP+++ CP+CG PK+ F P + + AV K R
Sbjct: 174 SNKAVYKCKTCGFEYKGDTPFEDLPEDWVCPICGEPKKNFVKVEPNKNKSS---AVYKCR 230
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 75 SKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
S Y CR C +IYN PF+ LP ++ CP+CG PK F
Sbjct: 223 SSAVYKCRTCNHIYNGDIPFEDLPSDWKCPICGEPKSNFE 262
>gi|255074001|ref|XP_002500675.1| predicted protein [Micromonas sp. RCC299]
gi|226515938|gb|ACO61933.1| predicted protein [Micromonas sp. RCC299]
Length = 151
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPA--VTRGANDTAVRKARKE 135
A +CRDCGYIY + F+ LP ++ CP CG+ K FRP T G N VR A+KE
Sbjct: 59 AMVCRDCGYIYRAQD-FNDLPKDWKCPPCGSGKNAFRPEKKQDFKTDGFNARGVRAAKKE 117
>gi|349688967|ref|ZP_08900109.1| rubredoxin-type Fe(Cys)4 protein [Gluconacetobacter oboediens
174Bp2]
Length = 442
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 15/66 (22%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYT-PAV---TRG 123
+ICR CG+IY+E FD +PD++ CP+CG K F PY PAV TR
Sbjct: 7 FICRVCGWIYDEALGDPDGGLPPGTRFDDIPDDWACPLCGVTKADFEPYVLPAVAVATRA 66
Query: 124 ANDTAV 129
D +V
Sbjct: 67 TPDISV 72
>gi|119487339|ref|ZP_01621090.1| Rubrerythrin [Lyngbya sp. PCC 8106]
gi|119455894|gb|EAW37029.1| Rubrerythrin [Lyngbya sp. PCC 8106]
Length = 233
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 22 LAPTGNNAGL-RRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYI 80
+A + +AG+ R+ A F +S H Q L P S + A+ +I
Sbjct: 126 IAESKEHAGIFRKAAQNFGFLTSIEN---HHANQYTEALQALDGVEP--SAKTATSGKWI 180
Query: 81 CRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
C+ C IY+ F+ +P++++CP+CGA K+ F PY+ A+
Sbjct: 181 CKQCSMIYDPVVGDPDSGIAAGTAFEDIPEDWYCPICGASKKSFVPYSEAI 231
>gi|303276777|ref|XP_003057682.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226460339|gb|EEH57633.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 530
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTP 118
++C +CGYIY PFD L ++ CP C APK RF Y P
Sbjct: 98 HVCEECGYIYALETPFDALGADFECPQCRAPKDRFSEYVP 137
>gi|255076351|ref|XP_002501850.1| SNF2 super family [Micromonas sp. RCC299]
gi|226517114|gb|ACO63108.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1989
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTR--GANDTAVRKARKEQ 136
+IC DCGY+Y PFD D++ CP C APK RF Y + + GA A R +
Sbjct: 1343 HICVDCGYLYVMSTPFDAQRDDFACPQCDAPKSRFAAYDSSSGKAIGAVAAAQLAPRADD 1402
Query: 137 IQRDEAIGKALP 148
+ D +G P
Sbjct: 1403 EEADGEVGNDEP 1414
>gi|345892291|ref|ZP_08843114.1| rubredoxin-1 [Desulfovibrio sp. 6_1_46AFAA]
gi|345047430|gb|EGW51295.1| rubredoxin-1 [Desulfovibrio sp. 6_1_46AFAA]
Length = 45
Score = 52.8 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 77 QAYICRDCGYIYN----ERKPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY Y+ + PFDQLPD++ CPVCG K +F P
Sbjct: 2 QKYVCSVCGYEYDPAEHDNVPFDQLPDDWVCPVCGVSKDQFNP 44
>gi|420157913|ref|ZP_14664738.1| rubredoxin [Clostridium sp. MSTE9]
gi|394755402|gb|EJF38637.1| rubredoxin [Clostridium sp. MSTE9]
Length = 219
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 79 YICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRF 113
+IC+ CGYIYN+ PF+ LP+++ CP+C APK F
Sbjct: 181 FICKICGYIYNDPDVPFEDLPEDWLCPICAAPKSAF 216
>gi|430375557|ref|ZP_19429960.1| rubredoxin family protein [Moraxella macacae 0408225]
gi|429540788|gb|ELA08816.1| rubredoxin family protein [Moraxella macacae 0408225]
Length = 453
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPY 116
++CR CG+IY+E+ F+ +PD++ CP+CG KR F P+
Sbjct: 19 FLCRACGWIYDEKTGDPDSGLPAGTRFEDIPDDWVCPLCGVSKRDFEPF 67
>gi|303277295|ref|XP_003057941.1| nitrite reductase fusion with b5r chloroplast precursor [Micromonas
pusilla CCMP1545]
gi|226460598|gb|EEH57892.1| nitrite reductase fusion with b5r chloroplast precursor [Micromonas
pusilla CCMP1545]
Length = 1004
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 68 KFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
K + + K +IC CGYIY E KPF +L D++ CP C A K +F
Sbjct: 671 KGTPKAMGKATHICTACGYIYQETKPFAELSDDFVCPACSAEKSKF 716
>gi|330990544|ref|ZP_08314502.1| Rubredoxin-NAD(+) reductase [Gluconacetobacter sp. SXCC-1]
gi|329762447|gb|EGG78933.1| Rubredoxin-NAD(+) reductase [Gluconacetobacter sp. SXCC-1]
Length = 442
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 14/59 (23%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYT---PAVTRG 123
+ICR CG+IY+E FD +PD++ CP+CG K F PY AVT G
Sbjct: 7 FICRVCGWIYDEALGDADGGLPPGTRFDDIPDDWACPLCGVTKADFEPYVLPAAAVTAG 65
>gi|433552074|pdb|6RXN|A Chain A, The Structure Of Rubredoxin From Desulfovibrio
Desulfuricans
Length = 46
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 77 QAYICRDCGYIYN----ERKPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY Y+ + PFDQLPD++ CPVCG K +F P
Sbjct: 3 QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSKDQFSP 45
>gi|220905273|ref|YP_002480585.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|134112|sp|P04170.1|RUBR1_DESDA RecName: Full=Rubredoxin-1; Short=Rd-1
gi|219869572|gb|ACL49907.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 45
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 77 QAYICRDCGYIYN----ERKPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY Y+ + PFDQLPD++ CPVCG K +F P
Sbjct: 2 QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSKDQFSP 44
>gi|218246351|ref|YP_002371722.1| rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 8801]
gi|218166829|gb|ACK65566.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 8801]
Length = 237
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 11/58 (18%)
Query: 74 ASKQAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A+ + +IC+ C IY+ PFD +PD++ CP+CGA K+ F PY A+
Sbjct: 178 AATRKWICKVCSMIYDPTVGDPDSGIAAGTPFDAIPDDWTCPICGASKKSFVPYEEAI 235
>gi|225568687|ref|ZP_03777712.1| hypothetical protein CLOHYLEM_04765 [Clostridium hylemonae DSM
15053]
gi|225162186|gb|EEG74805.1| hypothetical protein CLOHYLEM_04765 [Clostridium hylemonae DSM
15053]
Length = 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
++C CGY+Y+ PF++LPD+Y CPVCG K +F
Sbjct: 177 WVCSVCGYVYDGPTPFEELPDSYKCPVCGQGKDKF 211
>gi|257059397|ref|YP_003137285.1| rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 8802]
gi|256589563|gb|ACV00450.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 8802]
Length = 237
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 11/58 (18%)
Query: 74 ASKQAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A+ + +IC+ C IY+ PFD +PD++ CP+CGA K+ F PY A+
Sbjct: 178 AATRKWICKVCSMIYDPTVGDPDSGIAAGTPFDAIPDDWTCPICGASKKSFVPYEEAI 235
>gi|315926175|ref|ZP_07922375.1| anaerobic nitric oxide reductase flavorubredoxin [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315620619|gb|EFV00600.1| anaerobic nitric oxide reductase flavorubredoxin [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 462
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 11/49 (22%)
Query: 78 AYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+Y+C CGY+Y+ K PF LPD++ CPVCG PK +F P
Sbjct: 413 SYVCSVCGYVYDPAKGDPDGGIPAGTPFADLPDDWCCPVCGVPKSKFNP 461
>gi|338740796|ref|YP_004677758.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Hyphomicrobium sp. MC1]
gi|337761359|emb|CCB67192.1| FAD-dependent pyridine nucleotide-disulphide
oxidoreductase:Rubredoxin-type Fe(Cys)4 protein
[Hyphomicrobium sp. MC1]
Length = 448
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 12/64 (18%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTP-AVTRGAND 126
+ICR CG IY+E + F+ +PD++ CP+C K F PY P A+T
Sbjct: 20 FICRVCGLIYDEAEGDIDSGLPPGTRFEDIPDDWECPICNVTKVDFDPYVPRAITDMPAS 79
Query: 127 TAVR 130
TAVR
Sbjct: 80 TAVR 83
>gi|416156321|ref|ZP_11604453.1| rubredoxin family protein [Moraxella catarrhalis 101P30B1]
gi|416224746|ref|ZP_11626650.1| rubredoxin family protein [Moraxella catarrhalis 103P14B1]
gi|416253140|ref|ZP_11638163.1| rubredoxin family protein [Moraxella catarrhalis O35E]
gi|326562280|gb|EGE12606.1| rubredoxin family protein [Moraxella catarrhalis 103P14B1]
gi|326575483|gb|EGE25408.1| rubredoxin family protein [Moraxella catarrhalis 101P30B1]
gi|326577901|gb|EGE27765.1| rubredoxin family protein [Moraxella catarrhalis O35E]
Length = 462
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 12/57 (21%)
Query: 72 RVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
R A KQ ++CR CG+IY+E+ F+ +P+++ CP+CG KR F P+
Sbjct: 23 RGAWKQ-FLCRACGWIYDEKLGDPDGGLPAGTRFEDIPEDWECPLCGVTKRDFEPFV 78
>gi|417001680|ref|ZP_11941266.1| rubredoxin [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479802|gb|EGC82889.1| rubredoxin [Anaerococcus prevotii ACS-065-V-Col13]
Length = 52
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y+C CGYIY+ ++ FDQLP+++ CPVCGA K F P
Sbjct: 3 YVCTACGYIYDPKEGDVDNGIEAGTEFDQLPEDWVCPVCGAGKDMFEP 50
>gi|294495606|ref|YP_003542099.1| thiamine pyrophosphate protein TPP binding domain protein
[Methanohalophilus mahii DSM 5219]
gi|292666605|gb|ADE36454.1| thiamine pyrophosphate protein TPP binding domain protein
[Methanohalophilus mahii DSM 5219]
Length = 592
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 79 YICRDCGYIYNER---KPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKE 135
Y C C ++Y+E + FD LPD+Y CPVCGAPK F P + +T V E
Sbjct: 4 YRCSVCNWVYDEEAEGQDFDSLPDDYTCPVCGAPKSAFVPEGGEKEDESVETTVADKIVE 63
Query: 136 QIQ 138
Q++
Sbjct: 64 QLE 66
>gi|416235044|ref|ZP_11630011.1| rubredoxin family protein [Moraxella catarrhalis 12P80B1]
gi|416245884|ref|ZP_11634779.1| rubredoxin family protein [Moraxella catarrhalis BC8]
gi|421779086|ref|ZP_16215580.1| rubredoxin family protein [Moraxella catarrhalis RH4]
gi|326564742|gb|EGE14955.1| rubredoxin family protein [Moraxella catarrhalis 12P80B1]
gi|326571971|gb|EGE21976.1| rubredoxin family protein [Moraxella catarrhalis BC8]
gi|407813527|gb|EKF84307.1| rubredoxin family protein [Moraxella catarrhalis RH4]
Length = 462
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 12/57 (21%)
Query: 72 RVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
R A KQ ++CR CG+IY+E+ F+ +P+++ CP+CG KR F P+
Sbjct: 23 RGAWKQ-FLCRACGWIYDEKLGDPDGGLPAGTRFEDIPEDWECPLCGVTKRDFEPFV 78
>gi|296112270|ref|YP_003626208.1| rubredoxin family protein [Moraxella catarrhalis RH4]
gi|295919964|gb|ADG60315.1| rubredoxin family protein [Moraxella catarrhalis BBH18]
Length = 462
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 12/57 (21%)
Query: 72 RVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
R A KQ ++CR CG+IY+E+ F+ +P+++ CP+CG KR F P+
Sbjct: 23 RGAWKQ-FLCRACGWIYDEKLGDPDGELPAGTRFEDIPEDWECPLCGVTKRDFEPFV 78
>gi|416237907|ref|ZP_11631262.1| rubredoxin family protein [Moraxella catarrhalis BC1]
gi|416250413|ref|ZP_11637253.1| rubredoxin family protein [Moraxella catarrhalis CO72]
gi|326568995|gb|EGE19064.1| rubredoxin family protein [Moraxella catarrhalis BC1]
gi|326574532|gb|EGE24473.1| rubredoxin family protein [Moraxella catarrhalis CO72]
Length = 462
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 12/57 (21%)
Query: 72 RVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
R A KQ ++CR CG+IY+E+ F+ +P+++ CP+CG KR F P+
Sbjct: 23 RGAWKQ-FLCRACGWIYDEKLGDPDGGLPAGTRFEDIPEDWECPLCGVTKRDFEPFV 78
>gi|416230617|ref|ZP_11628541.1| rubredoxin family protein [Moraxella catarrhalis 46P47B1]
gi|326560740|gb|EGE11108.1| rubredoxin family protein [Moraxella catarrhalis 46P47B1]
Length = 462
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 12/57 (21%)
Query: 72 RVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
R A KQ ++CR CG+IY+E+ F+ +P+++ CP+CG KR F P+
Sbjct: 23 RGAWKQ-FLCRACGWIYDEKLGDPDGGLPAGTRFEDIPEDWECPLCGVTKRDFEPFV 78
>gi|427716250|ref|YP_007064244.1| rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 7507]
gi|427348686|gb|AFY31410.1| Rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 7507]
Length = 237
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 15/68 (22%)
Query: 68 KFSMRVASK----QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRR 112
+ + +VAS+ + +ICR C IY+ PF+Q+PD++ CP+CGA K+
Sbjct: 168 QVTTKVASEDPKTRKWICRQCSMIYDPVAGDPDSGIAPGTPFEQIPDDWHCPICGASKKT 227
Query: 113 FRPYTPAV 120
F+P V
Sbjct: 228 FKPLEEKV 235
>gi|416216320|ref|ZP_11623644.1| rubredoxin family protein [Moraxella catarrhalis 7169]
gi|416243412|ref|ZP_11633933.1| rubredoxin family protein [Moraxella catarrhalis BC7]
gi|326561780|gb|EGE12115.1| rubredoxin family protein [Moraxella catarrhalis 7169]
gi|326569295|gb|EGE19356.1| rubredoxin family protein [Moraxella catarrhalis BC7]
Length = 462
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 12/57 (21%)
Query: 72 RVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
R A KQ ++CR CG+IY+E+ F+ +P+++ CP+CG KR F P+
Sbjct: 23 RGAWKQ-FLCRACGWIYDEKLGDPDGGLPAGTRFEDIPEDWECPLCGVTKRDFEPFV 78
>gi|125975597|ref|YP_001039507.1| FMN-binding flavin reductase-like protein [Clostridium thermocellum
ATCC 27405]
gi|256003668|ref|ZP_05428657.1| flavin reductase domain protein FMN-binding [Clostridium
thermocellum DSM 2360]
gi|281416609|ref|ZP_06247629.1| flavin reductase domain protein FMN-binding [Clostridium
thermocellum JW20]
gi|385778038|ref|YP_005687203.1| flavin reductase domain-containing FMN-binding protein [Clostridium
thermocellum DSM 1313]
gi|419723912|ref|ZP_14251016.1| flavin reductase domain protein FMN-binding protein [Clostridium
thermocellum AD2]
gi|419724739|ref|ZP_14251797.1| flavin reductase domain protein FMN-binding protein [Clostridium
thermocellum YS]
gi|125715822|gb|ABN54314.1| flavin reductase domain protein FMN-binding protein [Clostridium
thermocellum ATCC 27405]
gi|255992459|gb|EEU02552.1| flavin reductase domain protein FMN-binding [Clostridium
thermocellum DSM 2360]
gi|281408011|gb|EFB38269.1| flavin reductase domain protein FMN-binding [Clostridium
thermocellum JW20]
gi|316939718|gb|ADU73752.1| flavin reductase domain protein FMN-binding protein [Clostridium
thermocellum DSM 1313]
gi|380771778|gb|EIC05640.1| flavin reductase domain protein FMN-binding protein [Clostridium
thermocellum YS]
gi|380780147|gb|EIC09841.1| flavin reductase domain protein FMN-binding protein [Clostridium
thermocellum AD2]
Length = 220
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY Y PF+ LP++Y CPVCG PK F
Sbjct: 182 YVCSICGYEYTGDIPFEDLPEDYVCPVCGQPKSVF 216
>gi|212704430|ref|ZP_03312558.1| hypothetical protein DESPIG_02486 [Desulfovibrio piger ATCC 29098]
gi|212672151|gb|EEB32634.1| rubredoxin [Desulfovibrio piger ATCC 29098]
Length = 44
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 79 YICRDCGYIY----NERKPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY Y N+ PFDQLPD++ CPVCG K +F
Sbjct: 3 YVCSVCGYEYDPAENDNVPFDQLPDDWTCPVCGVSKDQF 41
>gi|289208157|ref|YP_003460223.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thioalkalivibrio sp. K90mix]
gi|288943788|gb|ADC71487.1| FAD-dependent pyridine nucleotide-disulphide oxidoreductase
[Thioalkalivibrio sp. K90mix]
Length = 476
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 19/93 (20%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
YIC+ CGYIY+E K F+ +PD+++CP C K F P+ P R +
Sbjct: 11 YICKVCGYIYDEAKGDPDSGLAPGTRFEDIPDDWYCPDCNVTKADFSPFEP---RAESTD 67
Query: 128 AVRKARKEQIQRDEAIGKALPIAIAVAAVALAG 160
AV A R + P A+ + +AG
Sbjct: 68 AVSAASAWSGPRGDD-----PDAVVIVGAGMAG 95
>gi|303276050|ref|XP_003057319.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461671|gb|EEH58964.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 166
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 69 FSMRVASKQAYICRDCGYIY-NERKPFDQLPDNYFCPVCGAPKRRFRPY 116
F + A+ Y+C DCGY+Y ++ F LP +Y CP C K RF+ Y
Sbjct: 51 FGKKAAAGTPYVCIDCGYVYRGQQGEFKDLPRDYKCPTCNVGKNRFKVY 99
>gi|412989189|emb|CCO15780.1| predicted protein [Bathycoccus prasinos]
Length = 185
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 72 RVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR-PYTPAV 120
+ A+ Q +C DCGYIY R F LP++Y CP CG K RF+ TPAV
Sbjct: 71 KEAAGQPMVCIDCGYIY--RGDFSALPNSYRCPTCGVGKNRFKAAMTPAV 118
>gi|303290122|ref|XP_003064348.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453946|gb|EEH51253.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 144
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTR--GANDTAVRKARKE 135
A +CRDCGY+Y F+ LP +Y CP CG+ K FRP + G N +R A++E
Sbjct: 58 AMVCRDCGYVYRGTD-FNDLPKDYKCPPCGSGKNAFRPEKKMDYKKDGFNAPGIRAAKRE 116
Query: 136 QIQ 138
+
Sbjct: 117 NKK 119
>gi|18977654|ref|NP_579011.1| rubredoxin [Pyrococcus furiosus DSM 3638]
gi|397651777|ref|YP_006492358.1| rubredoxin [Pyrococcus furiosus COM1]
gi|19857441|sp|P24297.2|RUBR_PYRFU RecName: Full=Rubredoxin; Short=Rd
gi|6729714|pdb|1BQ8|A Chain A, Rubredoxin (Methionine Mutant) From Pyrococcus Furiosus
gi|365813044|pdb|3RYG|A Chain A, 128 Hours Neutron Structure Of Perdeuterated Rubredoxin
gi|365813045|pdb|3RZ6|A Chain A, Neutron Structure Of Perdeuterated Rubredoxin Using 40
Hours 1st Pass Data
gi|365813046|pdb|3RZT|A Chain A, Neutron Structure Of Perdeuterated Rubredoxin Using Rapid
(14 Hours) Data
gi|365813078|pdb|3SS2|A Chain A, Neutron Structure Of Perdeuterated Rubredoxin Using 48
Hours 3rd Pass Data
gi|6066243|gb|AAF03228.1|AF156097_8 rubredoxin [Pyrococcus furiosus]
gi|18893380|gb|AAL81406.1| rubredoxin [Pyrococcus furiosus DSM 3638]
gi|393189368|gb|AFN04066.1| rubredoxin [Pyrococcus furiosus COM1]
Length = 54
Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
++C+ CGYIY+E F++LPD++ CP+CGAPK F
Sbjct: 4 WVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEF 49
>gi|23200152|pdb|1IU5|A Chain A, X-Ray Crystal Structure Of The Rubredoxin Mutant From
Pyrococcus Furiosus
gi|40889728|pdb|1RWD|A Chain A, Backbone Nmr Structure Of A Mutant P. Furiosus Rubredoxin
Using Residual Dipolar Couplings
gi|353529977|pdb|1IU6|A Chain A, Neutron Crystal Structure Of The Rubredoxin Mutant From
Pyrococcus Furiosus
Length = 53
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C+ CGYIY+E F+++PD++ CP+CGAPK F
Sbjct: 3 YVCKICGYIYDEDAGDPDNGVSPGTKFEEIPDDWVCPICGAPKSEF 48
>gi|186686582|ref|YP_001869778.1| rubredoxin-type Fe(Cys)4 protein [Nostoc punctiforme PCC 73102]
gi|186469034|gb|ACC84835.1| Rubredoxin-type Fe(Cys)4 protein [Nostoc punctiforme PCC 73102]
Length = 237
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 11/53 (20%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
+ICR C IY+ PF+++PD++ CP+CGA K+ F+P+ V
Sbjct: 183 WICRQCSMIYDPVAGDPDSGIAPGTPFEEIPDDWECPICGASKKTFKPFEEKV 235
>gi|239616511|ref|YP_002939833.1| Rubredoxin-type Fe(Cys)4 protein [Kosmotoga olearia TBF 19.5.1]
gi|239505342|gb|ACR78829.1| Rubredoxin-type Fe(Cys)4 protein [Kosmotoga olearia TBF 19.5.1]
Length = 103
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 11/52 (21%)
Query: 74 ASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ K+ Y C+ CGYIY+ + PF++LPDN+ CPVCG K +F
Sbjct: 49 SGKKKYRCKVCGYIYDPKNGDPDSGVAPGTPFEELPDNWVCPVCGVGKDKFE 100
>gi|160881904|ref|YP_001560872.1| rubredoxin-type Fe(Cys)4 protein [Clostridium phytofermentans ISDg]
gi|160430570|gb|ABX44133.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium phytofermentans ISDg]
Length = 50
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
Y+C C ++Y+ PF++LPD+Y CP+CG K F
Sbjct: 13 YVCSVCQWVYDGETPFEELPDDYECPICGQTKEVF 47
>gi|6729715|pdb|1BQ9|A Chain A, Rubredoxin (Formyl Methionine Mutant) From Pyrococcus
Furiosus
gi|295321853|pdb|3KYW|A Chain A, Xray Crystal Structure Determination Of H-Labeled
Perdeuterated Rubredoxin At 295k
gi|295321854|pdb|3KYX|A Chain A, Joint XrayNEUTRON CRYSTAL STRUCTURE DETERMINATION OF FULLY
Perdeuterated Rubredoxin At 295k
gi|295321855|pdb|3KYY|A Chain A, Joint XrayNEUTRON CRYSTAL STRUCTURE DETERMINATION OF
H-Labeled Perdeuterated Rubredoxin At 295k
Length = 54
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
++C+ CGYIY+E F++LPD++ CP+CGAPK F
Sbjct: 4 WVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEF 49
>gi|6729721|pdb|1BRF|A Chain A, Rubredoxin (Wild Type) From Pyrococcus Furiosus
gi|157830520|pdb|1CAA|A Chain A, X-Ray Crystal Structures Of The Oxidized And Reduced Forms
Of The Rubredoxin From The Marine Hyperthermophilic
Archaebacterium Pyrococcus Furiosus
gi|157830521|pdb|1CAD|A Chain A, X-Ray Crystal Structures Of The Oxidized And Reduced Forms
Of The Rubredoxin From The Marine Hyperthermophilic
Archaebacterium Pyrococcus Furiosus
gi|157834413|pdb|1ZRP|A Chain A, Solution-State Structure By Nmr Of Zinc-Substituted
Rubredoxin From The Marine Hyperthermophilic
Archaebacterium Pyrococcus Furiosus
gi|353529978|pdb|1VCX|A Chain A, Neutron Crystal Structure Of The Wild Type Rubredoxin From
Pyrococcus Furiosus At 1.5a Resolution
gi|238348|gb|AAB20233.1| rubredoxin, Rd [Pyrococcus furiosus, DSM 3638, Peptide, 53 aa]
Length = 53
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
++C+ CGYIY+E F++LPD++ CP+CGAPK F
Sbjct: 3 WVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEF 48
>gi|318041737|ref|ZP_07973693.1| rubredoxin [Synechococcus sp. CB0101]
Length = 237
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ CG IY+ PF+ +PD++ CP+CG K F PY PA + A
Sbjct: 181 WICKVCGVIYDPAVADPDSGLAAGTPFEAIPDDWTCPICGTRKANFMPYRPAELQAA 237
>gi|295321851|pdb|3KYU|A Chain A, X-Ray Crystal Structure Determination Of Fully
Perdeuterated Rubredoxin At 100k
gi|295321852|pdb|3KYV|A Chain A, Denovo X-Ray Crystal Structure Determination Of H-Labeled
Perdeuterated Rubredoxin At 100k
gi|430800800|pdb|4AR5|A Chain A, X-ray Crystallographic Structure Of The Oxidised Form
Perdeuterated Pyrococcus Furiosus Rubredoxin In D2o At
295k (in Quartz Capillary) To 1.00 Angstrom Resolution.
gi|430800801|pdb|4AR6|A Chain A, X-ray Crystallographic Structure Of The Reduced Form
Perdeuterated Pyrococcus Furiosus Rubredoxin At 295 K
(in Quartz Capillary) To 0.92 Angstroms Resolution.
gi|442570511|pdb|4AR3|A Chain A, Near-atomic Resolution Neutron Crystallography On The
Oxidised Form Perdeuterated Pyrococcus Furiosus
Rubredoxin.
gi|442570512|pdb|4AR4|A Chain A, Neutron Crystallographic Structure Of The Reduced Form
Perdeuterated Pyrococcus Furiosus Rubredoxin To 1.38
Angstroms Resolution
Length = 54
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
++C+ CGYIY+E F++LPD++ CP+CGAPK F
Sbjct: 4 WVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEF 49
>gi|94987139|ref|YP_595072.1| rubredoxin 2 (Rd-2) [Lawsonia intracellularis PHE/MN1-00]
gi|442555979|ref|YP_007365804.1| rubredoxin-2 (Rd-2) [Lawsonia intracellularis N343]
gi|94731388|emb|CAJ54751.1| Rubredoxin 2 (Rd-2) [Lawsonia intracellularis PHE/MN1-00]
gi|441493426|gb|AGC50120.1| rubredoxin-2 (Rd-2) [Lawsonia intracellularis N343]
Length = 67
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 13/55 (23%)
Query: 76 KQAYICR--DCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYT 117
K+ + C+ +CGYIYN + F+ LPDN+ CPVCGA K+ F+P T
Sbjct: 11 KEMWHCQITNCGYIYNPERGDKRAKIPPGTEFESLPDNWHCPVCGASKKSFKPLT 65
>gi|309774720|ref|ZP_07669743.1| glutamate synthase domain protein [Erysipelotrichaceae bacterium
3_1_53]
gi|308917493|gb|EFP63210.1| glutamate synthase domain protein [Erysipelotrichaceae bacterium
3_1_53]
Length = 467
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 79 YICRDCGYIYNER---KPFDQLPDNYFCPVCGAPKRRFRP 115
Y+C CGYIY+E P++ L D + CP+C APK F+P
Sbjct: 3 YVCEICGYIYDETAEGTPWNNLDDTWSCPLCTAPKACFKP 42
>gi|307718183|ref|YP_003873715.1| rubredoxin [Spirochaeta thermophila DSM 6192]
gi|306531908|gb|ADN01442.1| rubredoxin [Spirochaeta thermophila DSM 6192]
Length = 54
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPY 116
+ Y+C CGYIY+ E P F+ LPD++ CP+CGAPK F PY
Sbjct: 2 KKYVCDVCGYIYDPAEGDPDNGVDPGTAFEDLPDDWVCPMCGAPKEDFSPY 52
>gi|188583852|ref|YP_001927297.1| rubredoxin-type Fe(Cys)4 protein [Methylobacterium populi BJ001]
gi|179347350|gb|ACB82762.1| Rubredoxin-type Fe(Cys)4 protein [Methylobacterium populi BJ001]
Length = 444
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 13/67 (19%)
Query: 62 LASAAPKFSMRVASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPK 110
++++AP S+ Q ++CR CG IY+E + F +P+++ CP+CG K
Sbjct: 1 MSASAPSDSL--GPWQQFLCRACGLIYDEGEGDPDSGLPPGTRFADIPEDWACPICGVTK 58
Query: 111 RRFRPYT 117
F PYT
Sbjct: 59 ADFEPYT 65
>gi|354567985|ref|ZP_08987152.1| Rubredoxin-type Fe(Cys)4 protein [Fischerella sp. JSC-11]
gi|353541659|gb|EHC11126.1| Rubredoxin-type Fe(Cys)4 protein [Fischerella sp. JSC-11]
Length = 136
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 66 APKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+PK + + Q +ICR C IY+ + PF +P+++ CP+CGA K+ F
Sbjct: 69 SPKAASSDPATQKWICRQCSMIYDPTEGDPDSGIAPGTPFAAIPEDWHCPICGASKKTFV 128
Query: 115 PYTPAV 120
PY V
Sbjct: 129 PYEEVV 134
>gi|357145614|ref|XP_003573704.1| PREDICTED: rubredoxin-like [Brachypodium distachyon]
Length = 203
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 32/135 (23%)
Query: 56 PHQQQLLASAAPKFSMR-------VASKQAYICRDCGYIYNERK-----------PFDQL 97
P Q + PK R V + Y CR CGY+Y++ K PF +L
Sbjct: 78 PLQDEFALDEGPKLDPRRFEEQFAVLNTGVYECRSCGYLYDQAKGDPSYPVPPGLPFAKL 137
Query: 98 PDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKALPIA---IAVA 154
PD++ CP CGA + F + +V A Q Q+ G +L + +
Sbjct: 138 PDDWLCPTCGAAQSFF-----------DSKSVEIAGFAQNQQFGLGGNSLTGGQKTLLIY 186
Query: 155 AVALAGLYFYLNSAF 169
L G F+L+ F
Sbjct: 187 GSLLVGFAFFLSGYF 201
>gi|346307927|ref|ZP_08850055.1| hypothetical protein HMPREF9457_01764 [Dorea formicigenerans
4_6_53AFAA]
gi|345904282|gb|EGX74030.1| hypothetical protein HMPREF9457_01764 [Dorea formicigenerans
4_6_53AFAA]
Length = 228
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
++C CGY+Y+ PF++LPD + CP+C K +F+
Sbjct: 191 WVCSICGYVYDGDIPFEELPDTFVCPICKQGKDKFK 226
>gi|225620637|ref|YP_002721895.1| flavin reductase like domain-containing protein [Brachyspira
hyodysenteriae WA1]
gi|225215457|gb|ACN84191.1| flavin reductase like domain containing protein [Brachyspira
hyodysenteriae WA1]
Length = 221
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 75 SKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
+K Y C+ CG+ Y PF+ LP ++ CP+CG PK F
Sbjct: 179 TKSVYKCKTCGFEYKGDIPFEDLPSDWKCPICGEPKSNFE 218
>gi|166031102|ref|ZP_02233931.1| hypothetical protein DORFOR_00787 [Dorea formicigenerans ATCC
27755]
gi|166028949|gb|EDR47706.1| rubredoxin [Dorea formicigenerans ATCC 27755]
Length = 228
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
++C CGY+Y+ PF++LPD + CP+C K +F+
Sbjct: 191 WVCSICGYVYDGDIPFEELPDTFVCPICKQGKDKFK 226
>gi|303285830|ref|XP_003062205.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456616|gb|EEH53917.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 194
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 65 AAPKFSMRVASKQ----AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
A P+F ++++ Q +IC DCGY+Y PF + +Y CP C AP+ RF Y
Sbjct: 105 APPRFGKKLSAAQKERATHICVDCGYVYTLPTPFAEQGKDYQCPQCQAPRSRFAKYDVET 164
Query: 121 TR 122
R
Sbjct: 165 GR 166
>gi|218282184|ref|ZP_03488483.1| hypothetical protein EUBIFOR_01065 [Eubacterium biforme DSM 3989]
gi|218216820|gb|EEC90358.1| hypothetical protein EUBIFOR_01065 [Eubacterium biforme DSM 3989]
Length = 205
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 53 LSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRR 112
++ + +L +AP + ++ ++C CGY+Y + F+ PD+Y CPVCGA K
Sbjct: 143 MTYAYYHNVLKQSAPAKAPTYRKEEKWVCSVCGYVY-DGDDFENEPDDYVCPVCGAKKEM 201
Query: 113 FR 114
F+
Sbjct: 202 FK 203
>gi|331085928|ref|ZP_08335011.1| hypothetical protein HMPREF0987_01314 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406851|gb|EGG86356.1| hypothetical protein HMPREF0987_01314 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 218
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
++C CGY+Y+ PF++LPD++ CP+C K +F
Sbjct: 181 WVCSVCGYVYDGETPFEELPDSFTCPLCKMSKEKF 215
>gi|284043022|ref|YP_003393362.1| rubredoxin-type Fe(Cys)4 protein [Conexibacter woesei DSM 14684]
gi|283947243|gb|ADB49987.1| Rubredoxin-type Fe(Cys)4 protein [Conexibacter woesei DSM 14684]
Length = 60
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 11/53 (20%)
Query: 75 SKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ Q +IC CG+IY+ F+ +P+ +FCPVCGA KR F PY
Sbjct: 6 TSQKWICESCGFIYDPEDGDPDGGIPPGTAFEDIPETWFCPVCGARKRDFVPY 58
>gi|407696662|ref|YP_006821450.1| rubredoxin-type Fe(Cys)4 protein [Alcanivorax dieselolei B5]
gi|407254000|gb|AFT71107.1| Rubredoxin-type Fe(Cys)4 protein [Alcanivorax dieselolei B5]
Length = 441
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTP 118
+ YIC CG IY+E K F+ +P+++ CP+CG K F PY P
Sbjct: 7 KQYICLACGLIYDEEKGDPDGGLPPGTRFEDIPEDWECPLCGVGKADFEPYEP 59
>gi|148642247|ref|YP_001272760.1| rubredoxin [Methanobrevibacter smithii ATCC 35061]
gi|222444580|ref|ZP_03607095.1| hypothetical protein METSMIALI_00192 [Methanobrevibacter smithii
DSM 2375]
gi|261350880|ref|ZP_05976297.1| rubredoxin [Methanobrevibacter smithii DSM 2374]
gi|148551264|gb|ABQ86392.1| rubredoxin [Methanobrevibacter smithii ATCC 35061]
gi|222434145|gb|EEE41310.1| rubredoxin [Methanobrevibacter smithii DSM 2375]
gi|288860218|gb|EFC92516.1| rubredoxin [Methanobrevibacter smithii DSM 2374]
Length = 39
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
AY+C+ CGY+Y E F+ LPD++ CP+CG K +F
Sbjct: 2 AYVCKVCGYVY-EGDDFEDLPDDWVCPLCGVGKDQF 36
>gi|15678184|ref|NP_275299.1| rubredoxin [Methanothermobacter thermautotrophicus str. Delta H]
gi|2621198|gb|AAB84662.1| rubredoxin [Methanothermobacter thermautotrophicus str. Delta H]
Length = 53
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
Y+C+ CGYIY+ + PF+ LPD++ CPVCG K +F+
Sbjct: 4 YVCQMCGYIYDPEEGDPVSGIEAGTPFEDLPDDWVCPVCGVGKDQFK 50
>gi|427413445|ref|ZP_18903636.1| hypothetical protein HMPREF9282_01043 [Veillonella ratti
ACS-216-V-Col6b]
gi|425715438|gb|EKU78426.1| hypothetical protein HMPREF9282_01043 [Veillonella ratti
ACS-216-V-Col6b]
Length = 45
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 76 KQAYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
K Y+C CGY+Y+E F LPD++ CP CG PK +F
Sbjct: 2 KDKYVCSVCGYVYDEAAEGVAFADLPDDWECPTCGVPKSKF 42
>gi|386346186|ref|YP_006044435.1| rubredoxin-type Fe(Cys)4 protein [Spirochaeta thermophila DSM 6578]
gi|339411153|gb|AEJ60718.1| Rubredoxin-type Fe(Cys)4 protein [Spirochaeta thermophila DSM 6578]
Length = 54
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPY 116
+ Y+C CGYIY+ E P F+ LPD++ CP+CGAPK F PY
Sbjct: 2 KKYVCDVCGYIYDPAEGDPDGGVAPGTAFEDLPDDWVCPMCGAPKEDFSPY 52
>gi|298490675|ref|YP_003720852.1| rubredoxin-type Fe(Cys)4 protein ['Nostoc azollae' 0708]
gi|298232593|gb|ADI63729.1| Rubredoxin-type Fe(Cys)4 protein ['Nostoc azollae' 0708]
Length = 237
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 72 RVASK----QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPY 116
RVA + Q +ICR C IY+ PF Q+PD++ CP+CGA K+ F P
Sbjct: 172 RVAGEDPQTQKWICRQCSMIYDPVVGDPDSGIAPDTPFAQIPDDWSCPICGATKKTFNPL 231
Query: 117 TPAV 120
V
Sbjct: 232 ETKV 235
>gi|308804559|ref|XP_003079592.1| unnamed protein product [Ostreococcus tauri]
gi|116058047|emb|CAL54250.1| unnamed protein product [Ostreococcus tauri]
Length = 131
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 67 PKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAND 126
P S V + Y+C DCGY+Y F +LP++Y CP C K RF+P G +
Sbjct: 28 PGGSGGVVDRTPYLCIDCGYVYTG-GDFKKLPNSYRCPTCNVGKNRFKPQG-----GGSL 81
Query: 127 TAVRKARKE 135
A +KA KE
Sbjct: 82 LAQKKANKE 90
>gi|218529304|ref|YP_002420120.1| Rubredoxin-type Fe(Cys)4 protein [Methylobacterium extorquens CM4]
gi|218521607|gb|ACK82192.1| Rubredoxin-type Fe(Cys)4 protein [Methylobacterium extorquens CM4]
Length = 444
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPY 116
Q ++CR CG IY+E + F +PD++ CP+CG K F PY
Sbjct: 14 QLFLCRACGLIYDEGEGDSDSGLPPGTRFADIPDDWACPICGVTKSDFEPY 64
>gi|254560200|ref|YP_003067295.1| FAD-dependent pyridine nucleotide-disulfide
oxidoreductase:Rubredoxin-type Fe [Methylobacterium
extorquens DM4]
gi|254267478|emb|CAX23319.1| FAD-dependent pyridine nucleotide-disulphide
oxidoreductase:Rubredoxin-type Fe(Cys)4 protein
[Methylobacterium extorquens DM4]
Length = 444
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPY 116
Q ++CR CG IY+E + F +PD++ CP+CG K F PY
Sbjct: 14 QLFLCRACGLIYDEGEGDPDSGLPPGTRFADIPDDWACPICGVTKSDFEPY 64
>gi|163850579|ref|YP_001638622.1| rubredoxin-type Fe(Cys)4 protein [Methylobacterium extorquens PA1]
gi|163662184|gb|ABY29551.1| Rubredoxin-type Fe(Cys)4 protein [Methylobacterium extorquens PA1]
Length = 444
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPY 116
Q ++CR CG IY+E + F +PD++ CP+CG K F PY
Sbjct: 14 QLFLCRACGLIYDEGEGDPDSGLPPGTRFADIPDDWACPICGVTKSDFEPY 64
>gi|167757737|ref|ZP_02429864.1| hypothetical protein CLOSCI_00068 [Clostridium scindens ATCC 35704]
gi|336421890|ref|ZP_08602045.1| hypothetical protein HMPREF0993_01422 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167664619|gb|EDS08749.1| rubredoxin [Clostridium scindens ATCC 35704]
gi|336009739|gb|EGN39730.1| hypothetical protein HMPREF0993_01422 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 218
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 75 SKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
S ++C CGY+Y+ PF++LPD Y CP+C K +F
Sbjct: 174 SGAKWVCSICGYVYDGDIPFEELPDTYACPICHQGKDKF 212
>gi|325959761|ref|YP_004291227.1| acetolactate synthase [Methanobacterium sp. AL-21]
gi|325331193|gb|ADZ10255.1| Acetolactate synthase [Methanobacterium sp. AL-21]
Length = 585
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 79 YICRDCGYIYNE---RKPFDQLPDNYFCPVCGAPKRRFRP 115
Y C C YIY+E FD+LPD++ CPVC +PK F P
Sbjct: 4 YRCTVCNYIYDEDVESDKFDELPDDWRCPVCNSPKSVFVP 43
>gi|168010620|ref|XP_001758002.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690879|gb|EDQ77244.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 469
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 11/59 (18%)
Query: 73 VASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAV 120
V + AY CR CG++Y E K F LP+++ CP CGA K F+P + V
Sbjct: 177 VLNTGAYACRSCGHVYEEAKGDSSYPVAAGTLFRDLPEDWLCPTCGAAKGYFQPKSVEV 235
>gi|428169039|gb|EKX37977.1| hypothetical protein GUITHDRAFT_154838 [Guillardia theta CCMP2712]
Length = 116
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 79 YICRDCGYIYNER---KPFDQLPDNYFCPVCGAPKRRF-RPYTPAVTRGANDTAV 129
+IC DCGYIY R +PF+ L Y CP C P+RRF + V + D A+
Sbjct: 38 WICADCGYIYGSRGETQPFETLGRWYKCPQCAGPRRRFAKKLGNKVGGASGDNAI 92
>gi|357040281|ref|ZP_09102070.1| flavin reductase domain protein FMN-binding [Desulfotomaculum
gibsoniae DSM 7213]
gi|355356945|gb|EHG04726.1| flavin reductase domain protein FMN-binding [Desulfotomaculum
gibsoniae DSM 7213]
Length = 228
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y+C CGY+Y+ + PFD+LP+++ CPVCG K F P
Sbjct: 179 YVCDVCGYVYDPAQGDPENGIAPGTPFDKLPEDWVCPVCGVGKDEFSP 226
>gi|240137628|ref|YP_002962099.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Methylobacterium extorquens AM1]
gi|418059412|ref|ZP_12697361.1| Rubredoxin-type Fe(Cys)4 protein [Methylobacterium extorquens DSM
13060]
gi|240007596|gb|ACS38822.1| FAD-dependent pyridine nucleotide-disulphide
oxidoreductase:Rubredoxin-type Fe(Cys)4 protein
[Methylobacterium extorquens AM1]
gi|373567020|gb|EHP93000.1| Rubredoxin-type Fe(Cys)4 protein [Methylobacterium extorquens DSM
13060]
Length = 444
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPY 116
Q ++CR CG IY+E + F +PD++ CP+CG K F PY
Sbjct: 14 QLFLCRACGLIYDEGEGDPDSGLPPGTRFADIPDDWACPICGVTKLDFEPY 64
>gi|78214037|ref|YP_382816.1| rubrerythrin [Synechococcus sp. CC9605]
gi|78198496|gb|ABB36261.1| rubrerythrin [Synechococcus sp. CC9605]
Length = 237
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC++C IY+ + PF+ +PD++ CP+CGA K F PY A + A
Sbjct: 181 WICKECSMIYDPAEGDPDSGIAAGTPFEAIPDDWHCPICGARKASFVPYREAELKAA 237
>gi|392423656|ref|YP_006464650.1| rubredoxin [Desulfosporosinus acidiphilus SJ4]
gi|391353619|gb|AFM39318.1| rubredoxin [Desulfosporosinus acidiphilus SJ4]
Length = 58
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 11/45 (24%)
Query: 82 RDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ CGYIYN K PF++LPD + CP+CGA K+ F+P
Sbjct: 13 QSCGYIYNSEKGCKKSKISAGVPFEELPDTWKCPLCGASKKAFKP 57
>gi|333369900|ref|ZP_08461987.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Psychrobacter sp. 1501(2011)]
gi|332969067|gb|EGK08106.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Psychrobacter sp. 1501(2011)]
Length = 475
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 79 YICRDCGYIY-------NERKP-FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVR 130
Y C+ CG++Y ++ P F +L D + CP+CG K F P A++T +
Sbjct: 6 YECQACGWVYPPESDNTSDTVPSFSELEDGFSCPLCGVGKSEFNPIGQQHNEAASNTDLS 65
Query: 131 KARKEQI 137
K K+QI
Sbjct: 66 KQTKQQI 72
>gi|331091307|ref|ZP_08340147.1| hypothetical protein HMPREF9477_00790 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404468|gb|EGG84012.1| hypothetical protein HMPREF9477_00790 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 212
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 74 ASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
+S + ++C CGYIY+ F++LPD Y CP+C K +F
Sbjct: 170 SSTKHWVCGVCGYIYDGDTLFEELPDTYQCPICKVTKDKFE 210
>gi|395010302|ref|ZP_10393693.1| NAD(FAD)-dependent dehydrogenase [Acidovorax sp. CF316]
gi|394311603|gb|EJE48929.1| NAD(FAD)-dependent dehydrogenase [Acidovorax sp. CF316]
Length = 428
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRP 115
YIC CGYIY+E + F +PD++ CP+CG K F P
Sbjct: 19 YICHACGYIYDEEQGDPDGGLPPGTRFADIPDDWACPLCGVTKGDFEP 66
>gi|172036708|ref|YP_001803209.1| putative rubredoxin [Cyanothece sp. ATCC 51142]
gi|171698162|gb|ACB51143.1| putative rubredoxin [Cyanothece sp. ATCC 51142]
Length = 68
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
Q YIC C YIY+ K PF+ +PD++ CP CGA K +F PY
Sbjct: 9 QKYICNVCNYIYDPAKGDPDSGIEPGTPFEAIPDDWECPQCGATKSQFEPY 59
>gi|56750380|ref|YP_171081.1| rubredoxin [Synechococcus elongatus PCC 6301]
gi|81299988|ref|YP_400196.1| rubredoxin [Synechococcus elongatus PCC 7942]
gi|22002574|gb|AAM82725.1| RubR [Synechococcus elongatus PCC 7942]
gi|56685339|dbj|BAD78561.1| rubredoxin [Synechococcus elongatus PCC 6301]
gi|81168869|gb|ABB57209.1| rubredoxin [Synechococcus elongatus PCC 7942]
Length = 138
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 11/49 (22%)
Query: 81 CRDCGYIY--NERKP---------FDQLPDNYFCPVCGAPKRRFRPYTP 118
CR CGYIY NE P F+++P N+ CP+CG+P+ +FR P
Sbjct: 43 CRSCGYIYEPNEGDPRRQIAAGTVFEEVPSNWRCPICGSPRSQFRNIGP 91
>gi|397567460|gb|EJK45601.1| hypothetical protein THAOC_35780 [Thalassiosira oceanica]
Length = 114
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 79 YICRDCGYIYNER-KPFDQLPDNYFCPVCGAPKRRF 113
Y+C+DCGY++ + + +LPD+Y CP CGAPK RF
Sbjct: 59 YVCKDCGYVFTKGPAAWAKLPDSYGCPPCGAPKFRF 94
>gi|427710486|ref|YP_007052863.1| rubredoxin-type Fe(Cys)4 protein [Nostoc sp. PCC 7107]
gi|427362991|gb|AFY45713.1| Rubredoxin-type Fe(Cys)4 protein [Nostoc sp. PCC 7107]
Length = 237
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
+ICR C IY+ PF+ +PD++ CP+CGA K+ F+P V
Sbjct: 183 WICRQCSMIYDPVAGDPDSGIAPGTPFEDIPDDWQCPICGATKKTFKPLEEKV 235
>gi|218437812|ref|YP_002376141.1| rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7424]
gi|218170540|gb|ACK69273.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7424]
Length = 115
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 26/46 (56%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y CR CGY+Y K PF++LP N+ CPVCG PK +F
Sbjct: 18 YECRACGYVYEPNKGDSKLDISAGTPFEELPVNWRCPVCGVPKTQF 63
>gi|337287512|ref|YP_004626985.1| Rubredoxin-type Fe(Cys)4 protein [Thermodesulfatator indicus DSM
15286]
gi|335360340|gb|AEH46021.1| Rubredoxin-type Fe(Cys)4 protein [Thermodesulfatator indicus DSM
15286]
Length = 67
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 13/51 (25%)
Query: 78 AYICR--DCGYIY----NERK-------PFDQLPDNYFCPVCGAPKRRFRP 115
AYIC +CGYIY +RK PF++LP+++ CPVCGA K+ F+P
Sbjct: 9 AYICSTTNCGYIYVPSKGDRKGKIPPGTPFEELPEDWKCPVCGASKKAFKP 59
>gi|168021409|ref|XP_001763234.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685717|gb|EDQ72111.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 234
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 13/70 (18%)
Query: 62 LASAAPKFSMRVASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPK 110
L KF+ V + AY CR CG++Y E K F LP+++ CP CGA K
Sbjct: 124 LTGLEEKFA--VLNTGAYECRSCGHVYEEAKGDASYPVAAGTYFRDLPEDWLCPTCGAAK 181
Query: 111 RRFRPYTPAV 120
++P + V
Sbjct: 182 SYYQPKSVEV 191
>gi|254241176|ref|ZP_04934498.1| hypothetical protein PA2G_01865 [Pseudomonas aeruginosa 2192]
gi|126194554|gb|EAZ58617.1| hypothetical protein PA2G_01865 [Pseudomonas aeruginosa 2192]
Length = 445
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYT 117
+ICR CG IY+E F+ +PD++ CP+CG K F PY
Sbjct: 11 FICRACGLIYDEALGDPDSGLAPGTRFEDIPDDWECPLCGVTKLDFEPYV 60
>gi|403252397|ref|ZP_10918707.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga sp. EMP]
gi|402812410|gb|EJX26889.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga sp. EMP]
Length = 53
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C+ CGYIY+ K PF+ LPD++ CP+CGA K F P
Sbjct: 2 KKYRCKLCGYIYDPEKGDPDSGIEPGTPFEDLPDDWVCPLCGASKEDFEP 51
>gi|422660402|ref|ZP_16722815.1| rubredoxin-type Fe(Cys)4 protein [Pseudomonas syringae pv.
lachrymans str. M302278]
gi|331019008|gb|EGH99064.1| rubredoxin-type Fe(Cys)4 protein [Pseudomonas syringae pv.
lachrymans str. M302278]
Length = 444
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 11/60 (18%)
Query: 69 FSMRVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
S+ + + +ICR CG IY+E F+ +PD++ CP+CG K F P+
Sbjct: 1 MSVIFEAWKQFICRACGLIYDEELGDPDSGLAPGTRFEDIPDDWECPLCGVTKVDFEPFV 60
>gi|148653858|ref|YP_001280951.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Psychrobacter sp. PRwf-1]
gi|148572942|gb|ABQ95001.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Psychrobacter sp. PRwf-1]
Length = 462
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 79 YICRDCGYIYNERKP--------FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAND-TAV 129
Y C+ CG+IY + F++LPD + CP+CG K +F+P T GA T+
Sbjct: 6 YECQACGWIYPAQSESANPEPIAFNELPDTFCCPLCGVAKAQFKPLDVDETPGAATLTSS 65
Query: 130 RKARKEQIQRDEAIGKAL 147
+ +Q Q +G L
Sbjct: 66 MQNSSQQCQDVVVVGAGL 83
>gi|15678183|ref|NP_275298.1| rubredoxin [Methanothermobacter thermautotrophicus str. Delta H]
gi|14285763|sp|O26258.1|RUBR_METTH RecName: Full=Probable rubredoxin; Short=RD
gi|2621197|gb|AAB84661.1| rubredoxin [Methanothermobacter thermautotrophicus str. Delta H]
Length = 63
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 11/55 (20%)
Query: 72 RVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
V++ + Y CR CGYIY+ K PF+ LP+ + CP CGA K+ F+P
Sbjct: 7 EVSAMKRYKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMFKP 61
>gi|254417232|ref|ZP_05030977.1| rubredoxin, putative [Coleofasciculus chthonoplastes PCC 7420]
gi|196176038|gb|EDX71057.1| rubredoxin, putative [Coleofasciculus chthonoplastes PCC 7420]
Length = 115
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 20/70 (28%)
Query: 56 PHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCP 104
P +Q LA AP Y CR CGY+Y K PF++LP ++ CP
Sbjct: 4 PANEQTLAEQAPS---------RYECRSCGYVYEPNKGDSNRNIAAGTPFEELPSDWRCP 54
Query: 105 VCGAPKRRFR 114
VCGA K +F+
Sbjct: 55 VCGAKKPQFQ 64
>gi|407937303|ref|YP_006852944.1| rubredoxin-type Fe(Cys)4 protein [Acidovorax sp. KKS102]
gi|407895097|gb|AFU44306.1| rubredoxin-type Fe(Cys)4 protein [Acidovorax sp. KKS102]
Length = 440
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPY 116
Q+YIC CGY+Y+E +PD++ CP+CG K F PY
Sbjct: 39 QSYICNACGYVYHEADGDPDGGLPPGTRLADIPDDWACPLCGVTKADFSPY 89
>gi|408381433|ref|ZP_11178982.1| rubredoxin-type Fe(Cys)4 protein [Methanobacterium formicicum DSM
3637]
gi|407815900|gb|EKF86463.1| rubredoxin-type Fe(Cys)4 protein [Methanobacterium formicicum DSM
3637]
Length = 52
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y C+ CGYIY+ FD LPDN+FCP CGA K RF
Sbjct: 4 YKCKVCGYIYDSESGEPRNGTDPGTEFDTLPDNWFCPHCGANKTRF 49
>gi|227501234|ref|ZP_03931283.1| rubredoxin [Anaerococcus tetradius ATCC 35098]
gi|227216635|gb|EEI82039.1| rubredoxin [Anaerococcus tetradius ATCC 35098]
Length = 59
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 72 RVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
R S Y+C CGYIY+ + FDQLPD++ CP+CGA K F
Sbjct: 4 RRHSNMKYVCTACGYIYDPAEGDVDNGIAAGTEFDQLPDDWMCPLCGATKDMFE 57
>gi|255073831|ref|XP_002500590.1| predicted protein [Micromonas sp. RCC299]
gi|226515853|gb|ACO61848.1| predicted protein [Micromonas sp. RCC299]
Length = 147
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 74 ASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAN 125
A+ Q IC DCGYIY R FD LP +Y CP C K RF+ A + AN
Sbjct: 49 ANGQPMICIDCGYIY--RGDFDALPRDYKCPQCNVGKNRFKVVEQAGSSYAN 98
>gi|440684220|ref|YP_007159015.1| Rubredoxin-type Fe(Cys)4 protein [Anabaena cylindrica PCC 7122]
gi|428681339|gb|AFZ60105.1| Rubredoxin-type Fe(Cys)4 protein [Anabaena cylindrica PCC 7122]
Length = 237
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 77 QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
Q +ICR C IY+ PF +PD++ CP+CGA K+ F+P V
Sbjct: 181 QKWICRQCSMIYDPVTGDPDSGIAPGTPFAAIPDDWSCPICGATKKTFKPLEEKV 235
>gi|218961653|ref|YP_001741428.1| Rubredoxin-type Fe(Cys)4 protein [Candidatus Cloacamonas
acidaminovorans]
gi|167730310|emb|CAO81222.1| Rubredoxin-type Fe(Cys)4 protein [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 46
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 77 QAYICRDCGYIY----NERKPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y C CG+IY N+ PF+ LPD++ CP CG K F P
Sbjct: 2 QKYQCMACGWIYDPAENDDIPFEDLPDDFVCPECGVGKDMFEP 44
>gi|365092601|ref|ZP_09329688.1| rubredoxin-type Fe(Cys)4 protein [Acidovorax sp. NO-1]
gi|363415308|gb|EHL22436.1| rubredoxin-type Fe(Cys)4 protein [Acidovorax sp. NO-1]
Length = 439
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPY 116
Q+YIC CGY+Y+E +PD++ CP+CG K F PY
Sbjct: 38 QSYICNACGYVYHEADGDPDGGLPPGTRLADIPDDWACPLCGVTKADFSPY 88
>gi|367469299|ref|ZP_09469059.1| Rubredoxin [Patulibacter sp. I11]
gi|365815631|gb|EHN10769.1| Rubredoxin [Patulibacter sp. I11]
Length = 347
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIY--NERKP---------FDQLPDNYFCPVCGAPKRRF 113
+IC CGY+Y +E P F+ +PD + CPVCGA KR F
Sbjct: 298 WICEACGYVYEASEGDPDGGIPPGTAFEDIPDTWLCPVCGARKREF 343
>gi|21673926|ref|NP_661991.1| rubredoxin [Chlorobium tepidum TLS]
gi|22654089|sp|P58992.1|RUBR1_CHLTE RecName: Full=Rubredoxin-1; Short=Rd 1
gi|21647067|gb|AAM72333.1| rubredoxin [Chlorobium tepidum TLS]
Length = 69
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 11/50 (22%)
Query: 78 AYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+++C +CGYIY+ + PFD+LPD++ CPVC PK +F +
Sbjct: 16 SWMCAECGYIYDPAEGNLETNIRPGMPFDKLPDDWSCPVCNHPKNQFTKF 65
>gi|374578916|ref|ZP_09652010.1| rubredoxin [Desulfosporosinus youngiae DSM 17734]
gi|374414998|gb|EHQ87433.1| rubredoxin [Desulfosporosinus youngiae DSM 17734]
Length = 58
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 11/45 (24%)
Query: 82 RDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ CGYIYN K PF++LPD++ CP+CGA K+ F+P
Sbjct: 13 QSCGYIYNSEKGCKKSKIPKDVPFEELPDDWRCPLCGAGKKMFKP 57
>gi|404476503|ref|YP_006707934.1| flavin reductase-like FMN-binding protein [Brachyspira pilosicoli
B2904]
gi|404437992|gb|AFR71186.1| flavin reductase-like FMN-binding protein [Brachyspira pilosicoli
B2904]
Length = 222
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
Y C+ CG+ Y PF++LP ++ CP+CG PK F
Sbjct: 183 VYRCKTCGFEYKGSVPFEELPSDWKCPICGEPKSNFE 219
>gi|354554522|ref|ZP_08973826.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. ATCC 51472]
gi|353553331|gb|EHC22723.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. ATCC 51472]
Length = 61
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
Q YIC C YIY+ K PF+ +PD++ CP CGA K +F PY
Sbjct: 2 QKYICNVCNYIYDPAKGDPDSGIEPGTPFEAIPDDWECPQCGATKSQFEPY 52
>gi|431807664|ref|YP_007234562.1| flavin reductase-like FMN-binding protein [Brachyspira pilosicoli
P43/6/78]
gi|434381653|ref|YP_006703436.1| flavin reductase-like FMN-binding protein [Brachyspira pilosicoli
WesB]
gi|404430302|emb|CCG56348.1| flavin reductase-like FMN-binding protein [Brachyspira pilosicoli
WesB]
gi|430781023|gb|AGA66307.1| flavin reductase-like FMN-binding protein [Brachyspira pilosicoli
P43/6/78]
Length = 222
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
Y C+ CG+ Y PF++LP ++ CP+CG PK F
Sbjct: 183 VYRCKTCGFEYKGSVPFEELPSDWKCPICGEPKSNFE 219
>gi|222640345|gb|EEE68477.1| hypothetical protein OsJ_26879 [Oryza sativa Japonica Group]
Length = 221
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
V + Y CR CGY Y++ PF+QLPD++ CP CGA + F + +
Sbjct: 112 VLNTGVYECRSCGYRYDQAAGDPSYPVPPGLPFEQLPDDWRCPTCGAAQSFFESKSVEIA 171
Query: 122 RGANDTAVRKARKEQIQRDEA 142
A + AVR R+ +R E+
Sbjct: 172 GFAAEPAVRPRRQLPHRRPES 192
>gi|300871588|ref|YP_003786461.1| flavin reductase-like FMN-binding protein [Brachyspira pilosicoli
95/1000]
gi|300689289|gb|ADK31960.1| flavin reductase-like, FMN-binding protein [Brachyspira pilosicoli
95/1000]
Length = 222
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
Y C+ CG+ Y PF++LP ++ CP+CG PK F
Sbjct: 183 VYRCKTCGFEYKGSVPFEELPSDWKCPICGEPKSNFE 219
>gi|443325528|ref|ZP_21054219.1| rubredoxin [Xenococcus sp. PCC 7305]
gi|442794849|gb|ELS04245.1| rubredoxin [Xenococcus sp. PCC 7305]
Length = 61
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
Q YIC C YIY+ K PF+ +PD++ CP CGA K +F PY
Sbjct: 2 QKYICNVCNYIYDPAKGDPDSGIEPGTPFEAIPDDWSCPKCGAKKSQFEPY 52
>gi|257066959|ref|YP_003153215.1| rubredoxin-type Fe(Cys)4 protein [Anaerococcus prevotii DSM 20548]
gi|256798839|gb|ACV29494.1| Rubredoxin-type Fe(Cys)4 protein [Anaerococcus prevotii DSM 20548]
Length = 52
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ + FDQLP+++ CPVCGA K F
Sbjct: 3 YVCTACGYIYDPAEGDVDNGVEAGTEFDQLPEDWVCPVCGATKDMF 48
>gi|222100901|ref|YP_002535469.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga neapolitana DSM 4359]
gi|221573291|gb|ACM24103.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga neapolitana DSM 4359]
Length = 53
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ K PF++LPD++ CP+CGA K F P
Sbjct: 2 KKYRCTLCGYIYDPEKGDPDSGIEPGTPFEELPDDWVCPLCGASKEDFEP 51
>gi|296126372|ref|YP_003633624.1| flavin reductase domain-containing FMN-binding protein [Brachyspira
murdochii DSM 12563]
gi|296018188|gb|ADG71425.1| flavin reductase domain protein FMN-binding protein [Brachyspira
murdochii DSM 12563]
Length = 221
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
Y C+ CG+ Y PF+ LP ++ CP+CG PK F
Sbjct: 182 VYRCKICGFEYKGSVPFEDLPSDWVCPICGEPKSNFE 218
>gi|373455964|ref|ZP_09547779.1| rubredoxin [Dialister succinatiphilus YIT 11850]
gi|371934307|gb|EHO62101.1| rubredoxin [Dialister succinatiphilus YIT 11850]
Length = 54
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC+ CG+IY+E + F+ LP +Y CP+CGA K F Y
Sbjct: 2 KKYICKICGWIYDEAQGDPDNGIAPGTKFEDLPADYICPMCGAGKDEFEEY 52
>gi|194336064|ref|YP_002017858.1| Glutamate synthase (NADPH) [Pelodictyon phaeoclathratiforme BU-1]
gi|194308541|gb|ACF43241.1| Glutamate synthase (NADPH) [Pelodictyon phaeoclathratiforme BU-1]
Length = 529
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Query: 79 YICRDCGYIYNERKP---FDQLPDNYFCPVCGAPKRRF------RPYTPAV 120
+ C C YIY+E K ++ LP+ + CPVCG+PK F +P PAV
Sbjct: 4 WQCGLCSYIYDENKEPVAWEALPNEWMCPVCGSPKSSFVLLKEEQPIVPAV 54
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 75 SKQAYICRDCGYIYNERKP---FDQLPDNYFCPVCGAPKRRF------RPYTPAVT--RG 123
S Y C C Y Y+E K + LPD++ CPVCG+ K F RP + RG
Sbjct: 60 STNIYACALCSYAYDEAKEGLLWPALPDDWRCPVCGSGKESFSLAASDRPAAAGIVAERG 119
Query: 124 ANDTAVRKARKE 135
+ + + + R++
Sbjct: 120 SGEEYLAEWRRQ 131
>gi|282899095|ref|ZP_06307076.1| Rubrerythrin [Cylindrospermopsis raciborskii CS-505]
gi|281196011|gb|EFA70927.1| Rubrerythrin [Cylindrospermopsis raciborskii CS-505]
Length = 237
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
Q +ICR C IY+ PF ++PDN+ CP+CGA K+ F+
Sbjct: 181 QKWICRQCSMIYDPVSGDPDSGIAPGTPFAEIPDNWTCPICGATKKSFK 229
>gi|408381430|ref|ZP_11178979.1| flavin reductase [Methanobacterium formicicum DSM 3637]
gi|410721105|ref|ZP_11360449.1| rubredoxin [Methanobacterium sp. Maddingley MBC34]
gi|407815897|gb|EKF86460.1| flavin reductase [Methanobacterium formicicum DSM 3637]
gi|410599556|gb|EKQ54102.1| rubredoxin [Methanobacterium sp. Maddingley MBC34]
Length = 53
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C+ CGYIY+ F+ LPD++ CP+CGA K F P
Sbjct: 2 QKYLCKPCGYIYDPEVGDDMAGIEPGTAFEDLPDDWVCPMCGADKDLFEP 51
>gi|113477373|ref|YP_723434.1| rubredoxin-type Fe(Cys)4 protein [Trichodesmium erythraeum IMS101]
gi|110168421|gb|ABG52961.1| Rubredoxin-type Fe(Cys)4 protein [Trichodesmium erythraeum IMS101]
Length = 53
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIY+ + PF+ + D++ CPVCG K F P
Sbjct: 2 KKYICNVCGYIYDPEEGDPDSGISPGTPFENISDDWLCPVCGVDKEEFEP 51
>gi|45357866|ref|NP_987423.1| rubredoxin-type Fe(Cys)4 protein [Methanococcus maripaludis S2]
gi|45047426|emb|CAF29859.1| rubredoxin [Methanococcus maripaludis S2]
Length = 45
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 81 CRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
C CGY+Y+E K F +LPD++ CP+CGA K F
Sbjct: 6 CTICGYVYDEEKEGKKFSELPDDWACPICGAKKSAF 41
>gi|225390276|ref|ZP_03760000.1| hypothetical protein CLOSTASPAR_04027 [Clostridium asparagiforme
DSM 15981]
gi|225043653|gb|EEG53899.1| hypothetical protein CLOSTASPAR_04027 [Clostridium asparagiforme
DSM 15981]
Length = 254
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 14/76 (18%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAN 125
+ Y+C CGY+Y+E ++ LP+ + CP+CGA K F P P +G
Sbjct: 14 KKYVCSICGYVYDEAAGIPAAGIGPGTRWEDLPEGWVCPLCGASKDLFNPVEP--QKGPE 71
Query: 126 DTAVRKARKEQI-QRD 140
+ V+ A E + +RD
Sbjct: 72 NGTVKPAEPEAVSERD 87
>gi|408370386|ref|ZP_11168163.1| rubredoxin-type Fe(Cys)4 protein [Galbibacter sp. ck-I2-15]
gi|407744144|gb|EKF55714.1| rubredoxin-type Fe(Cys)4 protein [Galbibacter sp. ck-I2-15]
Length = 487
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 33 RPADRFALK-SSFSAPSLHLLLSPPHQQQL----------LASAAPKFSMRVASKQAYIC 81
R +AL P L + LS + QQL L + K + + KQ C
Sbjct: 374 RTYKTYALHVDKIELPGLLMELSKAYFQQLGQTTEETDKSLKDKSNKQTKPLKEKQVNQC 433
Query: 82 RDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
+C IY++ PF+QLP++Y C +C APK F P AVT
Sbjct: 434 SNCLTIYDQMYGDIQQDIPQNTPFEQLPEHYHCSLCEAPKSDFNPINQAVT 484
>gi|170290230|ref|YP_001737046.1| rubredoxin-type Fe(Cys)4 protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174310|gb|ACB07363.1| Rubredoxin-type Fe(Cys)4 protein [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 61
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGYIY+ K PF++LPD++ CP+CGAPK +F P
Sbjct: 9 YKCGVCGYIYDPMKGDESRGIKPGTPFEELPDDWRCPICGAPKSQFYP 56
>gi|126658680|ref|ZP_01729826.1| rubredoxin [Cyanothece sp. CCY0110]
gi|126620117|gb|EAZ90840.1| rubredoxin [Cyanothece sp. CCY0110]
Length = 61
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
Q YIC C YIY+ K PF+ +PD++ CP CGA K +F PY
Sbjct: 2 QKYICNVCNYIYDPAKGDPDSGIEPGTPFEAIPDDWECPNCGAKKAQFEPY 52
>gi|217077647|ref|YP_002335365.1| rubredoxin [Thermosipho africanus TCF52B]
gi|419760257|ref|ZP_14286538.1| rubredoxin [Thermosipho africanus H17ap60334]
gi|217037502|gb|ACJ76024.1| rubredoxin [Thermosipho africanus TCF52B]
gi|407514668|gb|EKF49476.1| rubredoxin [Thermosipho africanus H17ap60334]
Length = 52
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ PF++LP+++ CPVCG PK +F
Sbjct: 4 YVCTVCGYVYDPEVGDPDNGIEPGTPFEELPEDWVCPVCGVPKDQF 49
>gi|229495882|ref|ZP_04389608.1| rubredoxin [Porphyromonas endodontalis ATCC 35406]
gi|229317195|gb|EEN83102.1| rubredoxin [Porphyromonas endodontalis ATCC 35406]
Length = 54
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC CGYIY+ PF+ +PD++ CP+CGA K F PY
Sbjct: 2 KKYICELCGYIYDPEVGDPDSGIAPGTPFESIPDDWACPLCGAEKSDFVPY 52
>gi|317473693|ref|ZP_07932980.1| rubredoxin [Anaerostipes sp. 3_2_56FAA]
gi|316898814|gb|EFV20841.1| rubredoxin [Anaerostipes sp. 3_2_56FAA]
Length = 464
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 79 YICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRFRP 115
+ C CGY+Y+E+ PF QL +Y CPVC A K +F P
Sbjct: 4 FKCSICGYVYDEKSESVPFSQLEADYTCPVCKASKVKFEP 43
>gi|325002634|ref|ZP_08123746.1| rubrerythrin [Pseudonocardia sp. P1]
Length = 73
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 13/60 (21%)
Query: 73 VASKQA--YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPA 119
VA QA + C CG++Y+ + PF+ +PD++ CP+CGA K FR P
Sbjct: 8 VAEAQARLWFCEPCGFVYDPAEGDPDSGIEPGTPFEDIPDDWMCPICGASKSDFRELEPG 67
>gi|225019326|ref|ZP_03708518.1| hypothetical protein CLOSTMETH_03279 [Clostridium methylpentosum
DSM 5476]
gi|224947957|gb|EEG29166.1| hypothetical protein CLOSTMETH_03279 [Clostridium methylpentosum
DSM 5476]
Length = 475
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 79 YICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRFR 114
Y C CGYIY+E K P+D+L ++ CPVC AP+ +
Sbjct: 10 YQCSICGYIYDEEKMGVPWDELDSSWTCPVCTAPREVYE 48
>gi|337284462|ref|YP_004623936.1| rubredoxin [Pyrococcus yayanosii CH1]
gi|334900396|gb|AEH24664.1| rubredoxin [Pyrococcus yayanosii CH1]
Length = 53
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E + F++LPD++ CP+CGAPK F
Sbjct: 6 CTVCGYIYDEEEGDPDNGVLPGTKFEELPDDWVCPLCGAPKDMF 49
>gi|163310871|pdb|2PVE|A Chain A, Nmr And X-Ray Analysis Of Structural Additivity In Metal
Binding Site-Swapped Hybrids Of Rubredoxin
gi|163310872|pdb|2PVE|B Chain B, Nmr And X-Ray Analysis Of Structural Additivity In Metal
Binding Site-Swapped Hybrids Of Rubredoxin
gi|163310873|pdb|2PVE|C Chain C, Nmr And X-Ray Analysis Of Structural Additivity In Metal
Binding Site-Swapped Hybrids Of Rubredoxin
Length = 54
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C+ CGYIYN F +PD++ CP+CGAPK F
Sbjct: 2 KKYTCKICGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPICGAPKSEF 49
>gi|194336475|ref|YP_002018269.1| N-acetyltransferase GCN5 [Pelodictyon phaeoclathratiforme BU-1]
gi|194308952|gb|ACF43652.1| GCN5-related N-acetyltransferase [Pelodictyon phaeoclathratiforme
BU-1]
Length = 212
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 11/59 (18%)
Query: 70 SMRVASKQAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPYT 117
SM+ + + ++CR+CGY+Y+ E PF ++ + CPVC A K F P++
Sbjct: 154 SMKKSESETWMCRECGYLYDPAEGDPESLIKEGTPFAEVSCQWSCPVCFASKADFNPFS 212
>gi|91776525|ref|YP_546281.1| rubredoxin-type Fe(Cys)4 protein [Methylobacillus flagellatus KT]
gi|91710512|gb|ABE50440.1| Rubredoxin-type Fe(Cys)4 protein [Methylobacillus flagellatus KT]
Length = 415
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 11/67 (16%)
Query: 62 LASAAPKFSMRVASKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPK 110
+ SA K V + YIC CG IY+E F+ +PD++ CP+CG K
Sbjct: 1 MTSAVSKQGEPVVEWRKYICLACGLIYDEALGDPDSGLAPGTRFEDIPDDWSCPLCGVTK 60
Query: 111 RRFRPYT 117
F Y
Sbjct: 61 TDFELYV 67
>gi|14521100|ref|NP_126575.1| rubredoxin [Pyrococcus abyssi GE5]
gi|13124529|sp|Q9V099.1|RUBR_PYRAB RecName: Full=Rubredoxin; Short=Rd
gi|88191818|pdb|1YK5|A Chain A, Pyrococcus Abyssi Rubredoxin
gi|88191819|pdb|1YK5|B Chain B, Pyrococcus Abyssi Rubredoxin
gi|88191820|pdb|1YK5|C Chain C, Pyrococcus Abyssi Rubredoxin
gi|88191821|pdb|1YK5|D Chain D, Pyrococcus Abyssi Rubredoxin
gi|5458317|emb|CAB49806.1| rd rubredoxin [Pyrococcus abyssi GE5]
gi|380741665|tpe|CCE70299.1| TPA: rubredoxin [Pyrococcus abyssi GE5]
Length = 53
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C+ CGYIY+E + F+ LPD++ CP+CGAPK F
Sbjct: 6 CKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSEF 49
>gi|427722567|ref|YP_007069844.1| rubredoxin-type Fe(Cys)4 protein [Leptolyngbya sp. PCC 7376]
gi|427354287|gb|AFY37010.1| Rubredoxin-type Fe(Cys)4 protein [Leptolyngbya sp. PCC 7376]
Length = 233
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 11/55 (20%)
Query: 77 QAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
Q +IC+ C IY+ F+ +PD++ CP+CGA K+ F PY V
Sbjct: 176 QKWICKKCSMIYDPAVGDPDSGIAAGTNFEDIPDDWQCPICGATKKTFVPYEEYV 230
>gi|317970317|ref|ZP_07971707.1| rubredoxin [Synechococcus sp. CB0205]
Length = 231
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+IC+ CG IY+ + PF+ +P+++ CP+CG KR F PY
Sbjct: 181 WICKVCGVIYDPAQGDPDSGIAAGTPFESIPEDWSCPICGTRKRNFVPY 229
>gi|218283969|ref|ZP_03489830.1| hypothetical protein EUBIFOR_02426 [Eubacterium biforme DSM 3989]
gi|218215486|gb|EEC89024.1| hypothetical protein EUBIFOR_02426 [Eubacterium biforme DSM 3989]
Length = 189
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 79 YICRDCGYIYNERKP---FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAND-TAVRKARK 134
Y C CG+IY+E K F LP ++ CP C PK +F P +T A V K
Sbjct: 3 YRCLICGHIYDEEKEGVKFADLPADWKCPTCKQPKEKFVPVEDEMTWAAEHVVGVAKDVD 62
Query: 135 EQIQRD-----EAIGKALPIAIAVAAVA------LAGLYF 163
E I+ D E + + +A+A VA GLY+
Sbjct: 63 EDIKNDLRANFEGECSEVGMYLAMARVAHREGYPEVGLYY 102
>gi|167748005|ref|ZP_02420132.1| hypothetical protein ANACAC_02742 [Anaerostipes caccae DSM 14662]
gi|167652582|gb|EDR96711.1| rubredoxin [Anaerostipes caccae DSM 14662]
Length = 464
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 79 YICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRFRP 115
+ C CGY+Y+E PF QL +Y CPVC A K +F P
Sbjct: 4 FKCSICGYVYDEESESVPFSQLEADYTCPVCKASKDKFEP 43
>gi|317152523|ref|YP_004120571.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942774|gb|ADU61825.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio aespoeensis Aspo-2]
Length = 153
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+Y+ + P FD LPD++ CPVCGA K F P
Sbjct: 102 QKYVCEICGYVYDPAQGDPDSDIPAGTSFDDLPDDWTCPVCGATKENFVP 151
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 83 DCGYIYN----ERKP-------FDQLPDNYFCPVCGAPKRRFRP 115
+CG+IYN +RK F+ LPD + CPVCG KR FRP
Sbjct: 18 NCGFIYNPDRGDRKGRIPKGVLFEDLPDTWRCPVCGGTKRCFRP 61
>gi|302845527|ref|XP_002954302.1| hypothetical protein VOLCADRAFT_82726 [Volvox carteri f.
nagariensis]
gi|300260507|gb|EFJ44726.1| hypothetical protein VOLCADRAFT_82726 [Volvox carteri f.
nagariensis]
Length = 167
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 13/61 (21%)
Query: 65 AAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
AA KF M + S A C+ CGY Y K F LPD+Y CP+CGAPK +F
Sbjct: 60 AAEKF-MVIGSGSA-TCKGCGYEYKPEKGDPEFPVPPGVTFQALPDDYVCPICGAPKLKF 117
Query: 114 R 114
Sbjct: 118 E 118
>gi|15643424|ref|NP_228468.1| rubredoxin [Thermotoga maritima MSB8]
gi|148269417|ref|YP_001243877.1| rubredoxin-type Fe(Cys)4 protein [Thermotoga petrophila RKU-1]
gi|170288074|ref|YP_001738312.1| rubredoxin-type Fe(Cys)4 protein [Thermotoga sp. RQ2]
gi|281411886|ref|YP_003345965.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga naphthophila RKU-10]
gi|418045171|ref|ZP_12683267.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga maritima MSB8]
gi|4981182|gb|AAD35743.1|AE001739_6 rubredoxin [Thermotoga maritima MSB8]
gi|147734961|gb|ABQ46301.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga petrophila RKU-1]
gi|170175577|gb|ACB08629.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga sp. RQ2]
gi|281372989|gb|ADA66551.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga naphthophila RKU-10]
gi|351678253|gb|EHA61400.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga maritima MSB8]
Length = 53
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C+ CGYIY+ + PF+ LPD++ CP+CGA K F P
Sbjct: 2 KKYRCKLCGYIYDPEQGDPDSGIEPGTPFEDLPDDWVCPLCGASKEDFEP 51
>gi|428223439|ref|YP_007083661.1| rubredoxin [Synechococcus sp. PCC 7502]
gi|427997032|gb|AFY75473.1| rubredoxin [Synechococcus sp. PCC 7502]
Length = 65
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 12/56 (21%)
Query: 77 QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPY-TPAV 120
+ YIC+ CGY+Y+ PF LPD++ CP CG PK F P TPA
Sbjct: 2 EKYICKTCGYVYDPALGDPDSGIEPGIPFGALPDDWVCPKCGTPKADFEPEDTPAT 57
>gi|302337138|ref|YP_003802344.1| Rubredoxin-type Fe(Cys)4 protein [Spirochaeta smaragdinae DSM
11293]
gi|301634323|gb|ADK79750.1| Rubredoxin-type Fe(Cys)4 protein [Spirochaeta smaragdinae DSM
11293]
Length = 53
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGYIY+ + PF++LP+++ CP+CGA K F P
Sbjct: 2 QKYVCDVCGYIYDPAEGDPDNGVDPGTPFEKLPEDWVCPLCGASKEDFSP 51
>gi|428308443|ref|YP_007119420.1| rubredoxin [Microcoleus sp. PCC 7113]
gi|428250055|gb|AFZ16014.1| rubredoxin [Microcoleus sp. PCC 7113]
Length = 115
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 20/73 (27%)
Query: 53 LSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNY 101
+S ++Q LA AP Y CR CGY+Y K PF++LP+++
Sbjct: 1 MSEQAKEQTLAETAPS---------RYECRSCGYVYEPTKGDSNRDVPPGTPFEELPNDW 51
Query: 102 FCPVCGAPKRRFR 114
CPVCGA +F
Sbjct: 52 RCPVCGARTSQFE 64
>gi|255070859|ref|XP_002507511.1| nadh-nitrite reductase [Micromonas sp. RCC299]
gi|226522786|gb|ACO68769.1| nadh-nitrite reductase [Micromonas sp. RCC299]
Length = 997
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 72 RVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ K +IC CGYIY E + F +++ CP C APK +F
Sbjct: 672 KALGKATHICTSCGYIYQESQAFMTQSEDFVCPSCSAPKSKF 713
>gi|414078521|ref|YP_006997839.1| rubredoxin [Anabaena sp. 90]
gi|413971937|gb|AFW96026.1| rubredoxin [Anabaena sp. 90]
Length = 54
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
Q YIC C Y+Y+ F+ +PDN+ CPVCGA K F Y
Sbjct: 2 QNYICTVCDYVYDPEIGDPDGGIEPGTAFEDIPDNWVCPVCGAEKTEFELY 52
>gi|333980445|ref|YP_004518390.1| flavin reductase domain-containing FMN-binding protein
[Desulfotomaculum kuznetsovii DSM 6115]
gi|333823926|gb|AEG16589.1| flavin reductase domain protein FMN-binding protein
[Desulfotomaculum kuznetsovii DSM 6115]
Length = 228
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 19/77 (24%)
Query: 57 HQQQLLASAAPKFSMRVASKQA--------YICRDCGYIYNER-----------KPFDQL 97
+ Q+ + PK + KQA Y+C CGY+Y+ PF++L
Sbjct: 149 YYHQVKRGSIPKTAPTFIQKQAEVTVKMDKYVCSVCGYVYDPEVGDPENGVPPGTPFEKL 208
Query: 98 PDNYFCPVCGAPKRRFR 114
PD++ CPVCG K F
Sbjct: 209 PDDWTCPVCGVGKGEFE 225
>gi|406881189|gb|EKD29317.1| rubredoxin [uncultured bacterium (gcode 4)]
Length = 439
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
Y C CG+IY+E+ F+ +PD++ CPVCG K F PY
Sbjct: 173 YRCVPCGWIYDEKYGDPDGGIPPWTRFEDIPDDWVCPVCGVGKNDFVPY 221
>gi|359410484|ref|ZP_09202949.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium sp. DL-VIII]
gi|357169368|gb|EHI97542.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium sp. DL-VIII]
Length = 52
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ YIC CGYIY+E F+ +PD++ CP+CG PK F
Sbjct: 2 EKYICTVCGYIYDEALGDPDNGVAPGTKFEDIPDDWVCPLCGVPKSDF 49
>gi|338729882|ref|YP_004659274.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga thermarum DSM 5069]
gi|335364233|gb|AEH50178.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga thermarum DSM 5069]
Length = 54
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y C CGY+Y+ + PF++LP+++ CPVCGA K F P
Sbjct: 2 QKYRCIICGYVYDPAQGDPDGDIEPGTPFEELPEDWVCPVCGASKEDFEP 51
>gi|299530865|ref|ZP_07044279.1| rubredoxin-type Fe(Cys)4 protein [Comamonas testosteroni S44]
gi|298721086|gb|EFI62029.1| rubredoxin-type Fe(Cys)4 protein [Comamonas testosteroni S44]
Length = 422
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Query: 73 VASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYT 117
V + YICR CG +Y+E K F +P+++ CP+CG K F Y
Sbjct: 19 VMEYRQYICRACGLVYDEEKGDPDSGLAPGTRFADIPEDWECPLCGVTKSDFELYV 74
>gi|33866899|ref|NP_898458.1| rubrerythrin [Synechococcus sp. WH 8102]
gi|33639500|emb|CAE08884.1| Rubrerythrin [Synechococcus sp. WH 8102]
Length = 237
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ + PF+ +PD++ CP+CGA K F PY A + A
Sbjct: 181 WICKVCSMIYDPAEGDPDSGIVAGTPFEAIPDDWQCPICGARKASFVPYREAALKSA 237
>gi|152993340|ref|YP_001359061.1| rubredoxin [Sulfurovum sp. NBC37-1]
gi|151425201|dbj|BAF72704.1| rubredoxin [Sulfurovum sp. NBC37-1]
Length = 55
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
Q YIC CGYIY+ F++LPD++ CP CG K F PY
Sbjct: 3 QKYICTVCGYIYDPALGDPDSGITPGTAFEELPDDWECPDCGVSKEDFEPY 53
>gi|392406785|ref|YP_006443393.1| rubredoxin [Anaerobaculum mobile DSM 13181]
gi|390619921|gb|AFM21068.1| rubredoxin [Anaerobaculum mobile DSM 13181]
Length = 52
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
YIC CGY+Y+ + PF++LPD++ CPVCG K F P
Sbjct: 3 YICTVCGYVYDPAQGDPDSGIAPGTPFEELPDDWVCPVCGVGKDMFEP 50
>gi|88191817|pdb|1YK4|A Chain A, Ultra-High Resolution Structure Of Pyrococcus Abyssi
Rubredoxin W4lR5S
Length = 52
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C+ CGYIY+E + F+ LPD++ CP+CGAPK F
Sbjct: 5 CKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSEF 48
>gi|1894774|emb|CAA72620.1| rubredoxin [Clostridium diolis]
Length = 53
Score = 45.8 bits (107), Expect = 0.007, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ YIC CGYIY+E F+ +PD++ CP+CG PK F
Sbjct: 2 EKYICTVCGYIYDEAAGDPDNGVAPGTKFEDIPDDWVCPLCGVPKSDF 49
>gi|294675198|ref|YP_003575814.1| rubredoxin [Prevotella ruminicola 23]
gi|294472555|gb|ADE81944.1| rubredoxin [Prevotella ruminicola 23]
Length = 51
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
YIC CGY+Y+ E P F+ +PD++ CPVCG K FRP
Sbjct: 3 YICEVCGYVYDPAEGDPDGGIAPGTAFEDIPDDWVCPVCGVGKDNFRP 50
>gi|388565289|ref|ZP_10151782.1| rubredoxin-type Fe(Cys)4 protein [Hydrogenophaga sp. PBC]
gi|388267404|gb|EIK92901.1| rubredoxin-type Fe(Cys)4 protein [Hydrogenophaga sp. PBC]
Length = 433
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPY 116
Y+C CGY+Y+E + ++ +PD++ CP+CG K FR Y
Sbjct: 36 YLCEACGYVYDEAQGDPDGGLPPGTRYEDIPDDWACPLCGVTKADFRLY 84
>gi|406875423|gb|EKD25215.1| hypothetical protein ACD_80C00102G0007 [uncultured bacterium (gcode
4)]
Length = 543
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
YIC CGYIY++ F+ +PD+ CP+CG K F PY
Sbjct: 273 YICIPCGYIYDQALGDPDGWIAPWTRFENIPDSRVCPICGVSKLDFEPY 321
>gi|402570808|ref|YP_006620151.1| rubredoxin [Desulfosporosinus meridiei DSM 13257]
gi|402252005|gb|AFQ42280.1| rubredoxin [Desulfosporosinus meridiei DSM 13257]
Length = 58
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 11/43 (25%)
Query: 84 CGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
CGYIYN K PF++LPD + CP+CGA K+ F+P
Sbjct: 15 CGYIYNPEKGCKKSKIPKDVPFEELPDEWRCPLCGAGKKMFKP 57
>gi|332709768|ref|ZP_08429727.1| rubredoxin [Moorea producens 3L]
gi|332351595|gb|EGJ31176.1| rubredoxin [Moorea producens 3L]
Length = 53
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGY+Y+ PF+ +PD++ CPVCG K F P
Sbjct: 2 KKYVCTACGYVYDPEVGDPDSGIAPGTPFEDIPDDWVCPVCGVGKEDFEP 51
>gi|406927211|gb|EKD63276.1| hypothetical protein ACD_51C00305G0003 [uncultured bacterium]
Length = 148
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 79 YICRDCGYIYN----ERKPFDQLPDNYFCPVCGAPKRRF 113
+IC+ CG++YN F+ LPD++ CP+CGA K +F
Sbjct: 4 HICKVCGFLYNPTLNGNVEFENLPDDWKCPICGAAKSQF 42
>gi|206896172|ref|YP_002247180.1| rubredoxin [Coprothermobacter proteolyticus DSM 5265]
gi|206738789|gb|ACI17867.1| rubredoxin [Coprothermobacter proteolyticus DSM 5265]
Length = 52
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Y+C+ CG+IY+ PF++LP+++ CPVCGA K F P
Sbjct: 3 YVCQVCGFIYDPEVGDPDNGVAPGTPFEELPEDWVCPVCGASKDMFEP 50
>gi|87123471|ref|ZP_01079322.1| Rubrerythrin [Synechococcus sp. RS9917]
gi|86169191|gb|EAQ70447.1| Rubrerythrin [Synechococcus sp. RS9917]
Length = 237
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ + PF+ +PD++ CP+CGA K F PY A + A
Sbjct: 181 WICKVCSMIYDPAQGDPDSGITPGTPFEAIPDDWTCPICGARKASFVPYREAELKAA 237
>gi|428204863|ref|YP_007100489.1| rubredoxin-type Fe(Cys)4 protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012982|gb|AFY91098.1| Rubredoxin-type Fe(Cys)4 protein [Chroococcidiopsis thermalis PCC
7203]
Length = 57
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 11/54 (20%)
Query: 77 QAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPYTPA 119
+ Y C+ CG+IY+ R F+ LP+++ CPVCGA K +F+P P
Sbjct: 2 ERYSCKVCGHIYDLAEGDPKSGIAPRTAFEDLPEDWVCPVCGAKKAKFQPVLPG 55
>gi|91790675|ref|YP_551627.1| rubredoxin-type Fe(Cys)4 protein [Polaromonas sp. JS666]
gi|91699900|gb|ABE46729.1| Rubredoxin-type Fe(Cys)4 protein [Polaromonas sp. JS666]
Length = 445
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 18/68 (26%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAN 125
+ +ICR CG +Y+E + F +P+++ CP+CG K F PY
Sbjct: 26 EIFICRACGLLYDEARGDEDSGLAPGTRFADIPEDWACPLCGVTKADFEPYV-------R 78
Query: 126 DTAVRKAR 133
+ VR+AR
Sbjct: 79 EEPVRQAR 86
>gi|409095865|ref|ZP_11215889.1| Rubredoxin [Thermococcus zilligii AN1]
Length = 53
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E + F++LPD++ CP+CGAPK F
Sbjct: 6 CMVCGYIYDEDEGDPESGIEPGTRFEELPDDWVCPLCGAPKDMF 49
>gi|328953845|ref|YP_004371179.1| rubredoxin-type Fe(Cys)4 protein [Desulfobacca acetoxidans DSM
11109]
gi|328454169|gb|AEB09998.1| Rubredoxin-type Fe(Cys)4 protein [Desulfobacca acetoxidans DSM
11109]
Length = 68
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CG++Y+ K PF+ LP+ + CPVCGA K +F P
Sbjct: 18 KKYVCGVCGFVYDPAKGDPENNIPPGTPFESLPETWVCPVCGAAKDQFEP 67
>gi|229103126|ref|ZP_04233813.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus cereus Rock3-28]
gi|228680315|gb|EEL34505.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus cereus Rock3-28]
Length = 54
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIY+ + KP FD LP+++ CPVCG +F P
Sbjct: 2 KKYICLPCGYIYDPKIGDPDEDIKPGTSFDDLPEDWVCPVCGEDTEKFAP 51
>gi|328948060|ref|YP_004365397.1| flavin reductase domain-containing FMN-binding protein [Treponema
succinifaciens DSM 2489]
gi|328448384|gb|AEB14100.1| flavin reductase domain protein FMN-binding protein [Treponema
succinifaciens DSM 2489]
Length = 200
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
++ +IC CGYIY + LPD++ CPVC P FRP
Sbjct: 164 RKGFICTVCGYIYEG----ETLPDDFICPVCKHPASDFRP 199
>gi|304314368|ref|YP_003849515.1| rubredoxin [Methanothermobacter marburgensis str. Marburg]
gi|302587827|gb|ADL58202.1| rubredoxin [Methanothermobacter marburgensis str. Marburg]
Length = 53
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFR 114
Y+C+ CGYIY+ E P F+ LPD++ CPVCG K +F+
Sbjct: 4 YVCQMCGYIYDPEEGDPTSGIEPGTAFEDLPDDWVCPVCGVGKDQFK 50
>gi|410726468|ref|ZP_11364705.1| rubredoxin [Clostridium sp. Maddingley MBC34-26]
gi|410600501|gb|EKQ55028.1| rubredoxin [Clostridium sp. Maddingley MBC34-26]
Length = 53
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ YIC CGYIY+E + F+ +P+++ CP+CG PK F
Sbjct: 2 EKYICTVCGYIYDEAEGDPDNGVAPGTKFEDIPEDWVCPLCGVPKSDF 49
>gi|367470028|ref|ZP_09469748.1| Rubredoxin [Patulibacter sp. I11]
gi|365814878|gb|EHN10056.1| Rubredoxin [Patulibacter sp. I11]
Length = 54
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q +IC CG+IY+ PF+ +PD++ CPVCGA K F P
Sbjct: 2 QQWICEPCGFIYDPEDGDPDGGILPGTPFEDIPDDWSCPVCGAQKGEFAP 51
>gi|428211936|ref|YP_007085080.1| rubredoxin [Oscillatoria acuminata PCC 6304]
gi|428000317|gb|AFY81160.1| rubredoxin [Oscillatoria acuminata PCC 6304]
Length = 52
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+YN + F +PD++ CPVCG K F P
Sbjct: 2 QQYLCTTCGYVYNPEEGDPDSGIPPGTAFKDIPDDWICPVCGVSKEDFEP 51
>gi|435853524|ref|YP_007314843.1| rubredoxin [Halobacteroides halobius DSM 5150]
gi|433669935|gb|AGB40750.1| rubredoxin [Halobacteroides halobius DSM 5150]
Length = 53
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+Y+ + PF++LP+++ CP+CG K F P
Sbjct: 2 QKYVCTVCGYVYDPEEGDPDAGIEPGTPFEELPEDWECPLCGVGKDMFEP 51
>gi|410721103|ref|ZP_11360447.1| rubredoxin [Methanobacterium sp. Maddingley MBC34]
gi|410599554|gb|EKQ54100.1| rubredoxin [Methanobacterium sp. Maddingley MBC34]
Length = 52
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y C+ CGYIY+ FD LPD++FCP CGA K RF
Sbjct: 4 YKCKVCGYIYDTESGEPRNGTAPGTEFDALPDDWFCPHCGANKHRF 49
>gi|116074111|ref|ZP_01471373.1| rubrerythrin [Synechococcus sp. RS9916]
gi|116069416|gb|EAU75168.1| rubrerythrin [Synechococcus sp. RS9916]
Length = 237
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ + PF+ +PD++ CP+CGA K F PY A + A
Sbjct: 181 WICKLCSMIYDPAEGDPDSGIAPGTPFEAIPDDWSCPICGARKASFVPYREAELKAA 237
>gi|115475890|ref|NP_001061541.1| Os08g0323400 [Oryza sativa Japonica Group]
gi|38637405|dbj|BAD03663.1| putative rubredoxin [Oryza sativa Japonica Group]
gi|113623510|dbj|BAF23455.1| Os08g0323400 [Oryza sativa Japonica Group]
gi|125561174|gb|EAZ06622.1| hypothetical protein OsI_28872 [Oryza sativa Indica Group]
gi|215679383|dbj|BAG96523.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215697054|dbj|BAG91048.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 217
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 25/111 (22%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
V + Y CR CGY Y++ PF+QLPD++ CP CGA + F
Sbjct: 116 VLNTGVYECRSCGYRYDQAAGDPSYPVPPGLPFEQLPDDWRCPTCGAAQSFFE------- 168
Query: 122 RGANDTAVRKARKEQIQRDEAIGKALP---IAIAVAAVALAGLYFYLNSAF 169
+V A Q Q+ G +L A+ + L G F+L+ F
Sbjct: 169 ----SKSVEIAGFAQNQQFGLGGNSLTGDQKALLIYGSLLVGFLFFLSGYF 215
>gi|414075387|ref|YP_006994705.1| rubrerythrin [Anabaena sp. 90]
gi|413968803|gb|AFW92892.1| rubrerythrin [Anabaena sp. 90]
Length = 237
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 15/64 (23%)
Query: 72 RVASK----QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPY 116
RV S+ Q +ICR C IY+ F +PD++ CP+CGA K+ F+P
Sbjct: 172 RVVSEDPQTQKWICRQCSMIYDPVTGDPDSGIAPGTAFADIPDDWNCPICGATKKTFKPL 231
Query: 117 TPAV 120
V
Sbjct: 232 EEKV 235
>gi|373452680|ref|ZP_09544591.1| hypothetical protein HMPREF0984_01633 [Eubacterium sp. 3_1_31]
gi|371965751|gb|EHO83247.1| hypothetical protein HMPREF0984_01633 [Eubacterium sp. 3_1_31]
Length = 472
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 79 YICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRFR 114
YIC CGY+Y+E K P+ +LP ++ CP+C AP F+
Sbjct: 4 YICEICGYVYDEAKEGTPWSKLPADWACPLCTAPYGCFK 42
>gi|350564799|ref|ZP_08933615.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thioalkalimicrobium aerophilum AL3]
gi|349777501|gb|EGZ31865.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thioalkalimicrobium aerophilum AL3]
Length = 457
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
Q YIC+ CG IY+E + F+ +PD+++CP+C K F
Sbjct: 6 QKYICKTCGLIYDEAEGDPDSGLAPGTRFEDIPDDWYCPLCLVSKSDF 53
>gi|11498945|ref|NP_070178.1| rubredoxin [Archaeoglobus fulgidus DSM 4304]
gi|2649239|gb|AAB89910.1| rubredoxin (rd-2) [Archaeoglobus fulgidus DSM 4304]
Length = 73
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 69 FSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ V Y C+ CGY+Y+E + ++ LPD++ CPVCGA K +F
Sbjct: 13 WHTEVDKMAKYECQVCGYVYDEAEGDPDNDIPAGTKWEDLPDDWVCPVCGASKDQFE 69
>gi|414873502|tpg|DAA52059.1| TPA: hypothetical protein ZEAMMB73_731879 [Zea mays]
Length = 203
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 18/75 (24%)
Query: 58 QQQLLASAAPKFS-MRVASKQAYI------CRDCGYIYNERK-----------PFDQLPD 99
QQ PK MR K A + CR CGY Y++ PF QLPD
Sbjct: 80 HQQEDEDGGPKLDLMRFEEKFAVLNTGVHECRSCGYRYDQAAGDPSYPVPPGLPFAQLPD 139
Query: 100 NYFCPVCGAPKRRFR 114
+++CP CGA + F
Sbjct: 140 DWWCPTCGATQSSFE 154
>gi|293401691|ref|ZP_06645833.1| glutamate synthase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304949|gb|EFE46196.1| glutamate synthase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 472
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 79 YICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRFR 114
YIC CGY+Y+E K P+ +LP ++ CP+C AP F+
Sbjct: 4 YICEICGYVYDEAKEGTPWSKLPADWACPLCTAPYGCFK 42
>gi|159485894|ref|XP_001700979.1| rubredoxin [Chlamydomonas reinhardtii]
gi|158281478|gb|EDP07233.1| rubredoxin [Chlamydomonas reinhardtii]
Length = 169
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 16/77 (20%)
Query: 52 LLSPPHQQQLLAS---AAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQL 97
L+ +++L A AA KF M + S A C+ CGY Y K + L
Sbjct: 46 LMGEAERKKLEAEKLRAAEKF-MVIGSGSA-TCKGCGYEYKPEKGDPEFPVAPGTTYQSL 103
Query: 98 PDNYFCPVCGAPKRRFR 114
P++Y CP+CGAPK +F
Sbjct: 104 PEDYTCPICGAPKTKFE 120
>gi|407702589|ref|YP_006815738.1| Rubredoxin-type Fe4 protein [Bacillus thuringiensis MC28]
gi|407387004|gb|AFU17499.1| Rubredoxin-type Fe4 protein [Bacillus thuringiensis MC28]
Length = 54
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIYN F+ LP+++ CPVCG K F P
Sbjct: 2 KKYICLPCGYIYNPEVGDPDEDIEPGTSFEDLPEDWVCPVCGEDKNHFTP 51
>gi|386815249|ref|ZP_10102467.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thiothrix nivea DSM 5205]
gi|386419825|gb|EIJ33660.1| FAD-dependent pyridine nucleotide-disulfide oxidoreductase
[Thiothrix nivea DSM 5205]
Length = 455
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 11/72 (15%)
Query: 77 QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAN 125
+ Y C+ CG+IYNE R F LP+++FC CG + F Y +
Sbjct: 4 KCYKCKKCGHIYNELIGDPIFNIPPRTKFSDLPNSWFCSTCGDSRDLFDEYECSQVEDIV 63
Query: 126 DTAVRKARKEQI 137
D ++ +
Sbjct: 64 DDSIHHGTTHTV 75
>gi|237733819|ref|ZP_04564300.1| rubrerythrin [Mollicutes bacterium D7]
gi|229383157|gb|EEO33248.1| rubrerythrin [Coprobacillus sp. D7]
Length = 230
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 76 KQAYICRDCGYIYNE---RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRK 131
K Y+C+ CG+IY+E ++ L ++ CPVC APK +F T T K
Sbjct: 5 KMKYVCKICGFIYDEATQDAKWNDLDTDWVCPVCKAPKEKFEAVAETSTSKYAGTKTEK 63
>gi|427732515|ref|YP_007078752.1| rubrerythrin [Nostoc sp. PCC 7524]
gi|427368434|gb|AFY51155.1| rubrerythrin [Nostoc sp. PCC 7524]
Length = 237
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 15/61 (24%)
Query: 70 SMRVASK----QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
+ RVAS + +ICR C IY+ PF+ +PD++ CP+CGA K+ F
Sbjct: 170 TTRVASDDPNTRKWICRQCSMIYDPVTGDPDSGIAPGTPFEAIPDDWQCPICGATKKTFI 229
Query: 115 P 115
P
Sbjct: 230 P 230
>gi|332295300|ref|YP_004437223.1| rubredoxin-type Fe(Cys)4 protein [Thermodesulfobium narugense DSM
14796]
gi|332178403|gb|AEE14092.1| Rubredoxin-type Fe(Cys)4 protein [Thermodesulfobium narugense DSM
14796]
Length = 53
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
Y+C CGY+Y+ PF+Q+PD++ CPVCGA K F+
Sbjct: 4 YVCTICGYVYDPAVGDPDGGIAPNTPFEQIPDDWQCPVCGASKSDFK 50
>gi|148262942|ref|YP_001229648.1| rubredoxin-type Fe(Cys)4 protein [Geobacter uraniireducens Rf4]
gi|146396442|gb|ABQ25075.1| Rubredoxin-type Fe(Cys)4 protein [Geobacter uraniireducens Rf4]
Length = 52
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
++Y+C C Y+Y+ PF QLPDN+ CPVCGA K F P
Sbjct: 2 ESYVCTICQYVYDPAAGDPDNGIAPGTPFSQLPDNWVCPVCGAGKDLFEP 51
>gi|310778398|ref|YP_003966731.1| rubredoxin-type Fe(Cys)4 protein [Ilyobacter polytropus DSM 2926]
gi|309747721|gb|ADO82383.1| Rubredoxin-type Fe(Cys)4 protein [Ilyobacter polytropus DSM 2926]
Length = 53
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 9/47 (19%)
Query: 77 QAYICRDCGYIY--------NERK-PFDQLPDNYFCPVCGAPKRRFR 114
+ Y C CGYIY N+ PFDQL DN+ CP CG K+ F+
Sbjct: 4 EKYQCIHCGYIYVYIEYDNGNQMNLPFDQLDDNWTCPTCGLKKKIFK 50
>gi|417001672|ref|ZP_11941258.1| rubredoxin [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479794|gb|EGC82881.1| rubredoxin [Anaerococcus prevotii ACS-065-V-Col13]
Length = 52
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ + FDQLP+++ CPVCG K F
Sbjct: 3 YVCTACGYIYDPAEGDVDNGIEAGTEFDQLPEDWVCPVCGVGKDMF 48
>gi|266620704|ref|ZP_06113639.1| putative rubredoxin [Clostridium hathewayi DSM 13479]
gi|288867698|gb|EFC99996.1| putative rubredoxin [Clostridium hathewayi DSM 13479]
Length = 225
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
+ +IC CGYIY+E +++LP ++ CP+CGAPK FR
Sbjct: 2 KKFICSVCGYIYDEAAGIPDRGIEPGTKWEELPPDWVCPLCGAPKSAFR 50
>gi|150400055|ref|YP_001323822.1| rubredoxin-type Fe(Cys)4 protein [Methanococcus vannielii SB]
gi|150012758|gb|ABR55210.1| Rubredoxin-type Fe(Cys)4 protein [Methanococcus vannielii SB]
Length = 45
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
Query: 81 CRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
C CGY YNE K F +LPD++ CP+CGA K F
Sbjct: 6 CTICGYEYNEEKEGKKFSELPDDWKCPLCGAKKDAF 41
>gi|342215663|ref|ZP_08708310.1| rubredoxin [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341586553|gb|EGS29953.1| rubredoxin [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 53
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRFRP 115
Q Y C+ CGYIY+ + KP F+ LP+++ CP+CGA K F P
Sbjct: 2 QKYECQACGYIYDPQVGDEDNGVKPGTAFENLPEDWECPLCGASKDEFEP 51
>gi|428201657|ref|YP_007080246.1| rubrerythrin [Pleurocapsa sp. PCC 7327]
gi|427979089|gb|AFY76689.1| rubrerythrin [Pleurocapsa sp. PCC 7327]
Length = 243
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 60 QLLASAAP--KFSMRVASKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVC 106
Q LA AP K + + Q +ICR C IY+ PF+ +P+++ CP+C
Sbjct: 168 QALAGVAPLAKAASGDPATQKWICRQCSMIYDPVAGDPDSGIAPGTPFEAIPNDWHCPIC 227
Query: 107 GAPKRRFRPYTPA 119
A K F PY A
Sbjct: 228 KAAKNLFVPYEEA 240
>gi|268325619|emb|CBH39207.1| putative rubredoxin [uncultured archaeon]
Length = 45
Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 79 YICRDCGYIYNERKP---FDQLPDNYFCPVCGAPKRRF 113
+IC CGYIY+E + F+ LP+++ CP CG K F
Sbjct: 4 WICNVCGYIYDEEEAGTVFEDLPNDWLCPACGVGKEAF 41
>gi|303246657|ref|ZP_07332935.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio fructosovorans JJ]
gi|302491997|gb|EFL51875.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio fructosovorans JJ]
Length = 71
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 14/67 (20%)
Query: 73 VASKQAYICR--DCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYT-P 118
A ++ + C+ +CGYIYN K F+ LPD++ CPVCGA K+ FRP P
Sbjct: 2 AAPEEMWQCQTTNCGYIYNPDKGDRKGKIPAGTRFEDLPDDWKCPVCGAGKKCFRPLAGP 61
Query: 119 AVTRGAN 125
T+ A
Sbjct: 62 GSTKSAE 68
>gi|186972748|pdb|2PYA|A Chain A, Ultra-high Resolution Structure Of P. Abyssi Rubredoxin
W4l/r5s/a44s
Length = 52
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C+ CGYIY+E + F+ LPD++ CP+CG+PK F
Sbjct: 5 CKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGSPKSEF 48
>gi|78187820|ref|YP_375863.1| rubredoxin-like [Chlorobium luteolum DSM 273]
gi|78167722|gb|ABB24820.1| Rubredoxin-like protein [Chlorobium luteolum DSM 273]
Length = 76
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
Q ++C CGY+Y+ PF+ +P+++ CPVCG K F PY
Sbjct: 23 QKWVCVPCGYVYDPEAGDPDSGVQPGTPFEDVPEDWVCPVCGVDKTLFEPY 73
>gi|300869235|ref|ZP_07113829.1| rubredoxin-type Fe(Cys)4 protein [Oscillatoria sp. PCC 6506]
gi|300332780|emb|CBN59027.1| rubredoxin-type Fe(Cys)4 protein [Oscillatoria sp. PCC 6506]
Length = 111
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Query: 70 SMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ V + + CR CGY+Y RK F+ LP + CP CGAPK RF+
Sbjct: 5 ATEVKTLDRHECRACGYVYEPRKGHAQSQIPPGTAFEDLPQTWRCPACGAPKSRFQ 60
>gi|150017142|ref|YP_001309396.1| rubredoxin-type Fe(Cys)4 protein [Clostridium beijerinckii NCIMB
8052]
gi|149903607|gb|ABR34440.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium beijerinckii NCIMB
8052]
Length = 53
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 78 AYICRDCGYIY-----------NERKPFDQLPDNYFCPVCGAPKRRF 113
+Y+C CGYIY N F+ +PD++ CP+CG PK F
Sbjct: 3 SYVCTVCGYIYDPAVGDSDNGVNPGTKFEDIPDDWVCPLCGVPKSDF 49
>gi|325291135|ref|YP_004267316.1| flavin reductase [Syntrophobotulus glycolicus DSM 8271]
gi|324966536|gb|ADY57315.1| flavin reductase domain protein FMN-binding protein
[Syntrophobotulus glycolicus DSM 8271]
Length = 244
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y C C YIY+ K F+ LPD++ CPVCG K +F+P
Sbjct: 193 QKYECPVCSYIYDPEKGDPDSGIEPGTAFEALPDDWVCPVCGVDKSQFQP 242
>gi|337287372|ref|YP_004626845.1| Rubredoxin-type Fe(Cys)4 protein [Thermodesulfatator indicus DSM
15286]
gi|335360200|gb|AEH45881.1| Rubredoxin-type Fe(Cys)4 protein [Thermodesulfatator indicus DSM
15286]
Length = 53
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y C+ CGYIY+ K PF+ LP ++ CPVCGA K F+P
Sbjct: 4 YQCKTCGYIYDPEKGDVFHEIPPGTPFEDLPKDWTCPVCGASKIAFQP 51
>gi|337288097|ref|YP_004627569.1| Rubredoxin-type Fe(Cys)4 protein [Thermodesulfobacterium sp. OPB45]
gi|334901835|gb|AEH22641.1| Rubredoxin-type Fe(Cys)4 protein [Thermodesulfobacterium geofontis
OPF15]
Length = 54
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGYIY+ + PF+ LPD++ CP CGAPK F P
Sbjct: 4 YRCTVCGYIYDPNEGDPENNIPPGTPFESLPDDWVCPSCGAPKEDFEP 51
>gi|327398577|ref|YP_004339446.1| flavin reductase domain-containing FMN-binding protein [Hippea
maritima DSM 10411]
gi|327181206|gb|AEA33387.1| flavin reductase domain protein FMN-binding protein [Hippea
maritima DSM 10411]
Length = 234
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 72 RVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFR 114
R + Y C CGYIY+ + PF+ LPD++ CP+CGA K F
Sbjct: 175 RGGEMKKYRCIVCGYIYDPQLGDEENDIEPNTPFEDLPDDWTCPICGASKEDFE 228
>gi|428205603|ref|YP_007089956.1| rubredoxin-type Fe(Cys)4 protein [Chroococcidiopsis thermalis PCC
7203]
gi|428007524|gb|AFY86087.1| Rubredoxin-type Fe(Cys)4 protein [Chroococcidiopsis thermalis PCC
7203]
Length = 53
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRFRP 115
Q YIC CGYIY+ E +P F+ +PD++ CPVC A K F P
Sbjct: 2 QKYICSVCGYIYDPEAGDPEAEIEPGTQFEDIPDDWVCPVCAAAKEMFEP 51
>gi|406902798|gb|EKD45074.1| hypothetical protein ACD_70C00085G0002 [uncultured bacterium]
Length = 57
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 75 SKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFR 114
S Q +IC CGYIY+E K +D +PD++ CP CGA K F
Sbjct: 2 SYQKFICSLCGYIYDEAKGSPDEGIAPGTCWDDVPDDWVCPECGAMKSDFE 52
>gi|384251228|gb|EIE24706.1| Rubredoxin-like protein [Coccomyxa subellipsoidea C-169]
Length = 136
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 13/61 (21%)
Query: 65 AAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
AA KF M V + +A IC CGY Y + PF QLPD++ CP+CGA K F
Sbjct: 29 AAEKF-MVVGTGEA-ICAGCGYEYLPKNGDPEYPITPGTPFTQLPDDWNCPICGADKVTF 86
Query: 114 R 114
+
Sbjct: 87 Q 87
>gi|119720362|ref|YP_920857.1| rubredoxin-type Fe(Cys)4 protein [Thermofilum pendens Hrk 5]
gi|119525482|gb|ABL78854.1| Rubredoxin-type Fe(Cys)4 protein [Thermofilum pendens Hrk 5]
Length = 58
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 11/56 (19%)
Query: 71 MRVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
M+ + Y C CGY+Y+ PF++LP+N+ CPVCGA K F P
Sbjct: 1 MQEKKYKKYRCTVCGYVYSPELGDPDSNIPPGTPFEELPENWVCPVCGATKDLFEP 56
>gi|160934384|ref|ZP_02081771.1| hypothetical protein CLOLEP_03256 [Clostridium leptum DSM 753]
gi|156867057|gb|EDO60429.1| rubredoxin [Clostridium leptum DSM 753]
Length = 217
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 75 SKQAYICRDCGYIYNE-RKPFDQLPDNYFCPVCGAPKRRFR 114
S + +IC CGY+Y++ PF+ LP ++ CPVC A K F+
Sbjct: 175 STEEWICTICGYVYSDPDIPFEDLPADWTCPVCRAGKSMFQ 215
>gi|55669898|pdb|1T9P|A Chain A, Crystal Structure Of V44a, G45p Cp Rubredoxin
gi|55669899|pdb|1T9P|B Chain B, Crystal Structure Of V44a, G45p Cp Rubredoxin
gi|55669900|pdb|1T9P|C Chain C, Crystal Structure Of V44a, G45p Cp Rubredoxin
Length = 54
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIYN F +PD++ CP+CGAPK +F
Sbjct: 2 KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGAPKDQF 49
>gi|308271325|emb|CBX27933.1| High molecular weight rubredoxin [uncultured Desulfobacterium sp.]
Length = 230
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRP 115
Y C CGY+Y N KP F+ LPD + CPVCGA K F P
Sbjct: 182 YTCSVCGYVYDPETGDPDNGIKPGTKFEDLPDGWVCPVCGADKSSFSP 229
>gi|258515893|ref|YP_003192115.1| flavin reductase domain-containing FMN-binding protein
[Desulfotomaculum acetoxidans DSM 771]
gi|257779598|gb|ACV63492.1| flavin reductase domain protein FMN-binding [Desulfotomaculum
acetoxidans DSM 771]
Length = 227
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 72 RVASKQAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
V Y C CGYIY+ E P FD LP ++ CPVCGA K +F
Sbjct: 172 EVNKTDKYECNVCGYIYDPIEGDPDAGIAAGTAFDDLPADWVCPVCGAGKDKF 224
>gi|228949896|ref|ZP_04112093.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|423369705|ref|ZP_17347135.1| hypothetical protein IC3_04804 [Bacillus cereus VD142]
gi|423514692|ref|ZP_17491198.1| hypothetical protein IG3_06164 [Bacillus cereus HuA2-1]
gi|228809792|gb|EEM56216.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|401076092|gb|EJP84450.1| hypothetical protein IC3_04804 [Bacillus cereus VD142]
gi|402441757|gb|EJV73705.1| hypothetical protein IG3_06164 [Bacillus cereus HuA2-1]
Length = 54
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIYN F+ LP+++ CPVCG K F P
Sbjct: 2 KKYICLPCGYIYNPEVGDPDEDIEPGTSFEDLPEDWVCPVCGEDKNHFAP 51
>gi|260436073|ref|ZP_05790043.1| rubrerythrin [Synechococcus sp. WH 8109]
gi|260413947|gb|EEX07243.1| rubrerythrin [Synechococcus sp. WH 8109]
Length = 136
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ + PF+ +PD++ CP+CGA K F PY A + A
Sbjct: 80 WICKVCSMIYDPAEGDPDSGIAPGTPFEAIPDDWHCPICGARKASFAPYREAELKTA 136
>gi|167772510|ref|ZP_02444563.1| hypothetical protein ANACOL_03888 [Anaerotruncus colihominis DSM
17241]
gi|167665613|gb|EDS09743.1| rubredoxin [Anaerotruncus colihominis DSM 17241]
Length = 462
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 6/41 (14%)
Query: 79 YICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRFRPY 116
Y C CG+IY+E K PFDQL + CPVCG P F Y
Sbjct: 4 YRCNVCGFIYDEEKEGKPFDQLTE---CPVCGQPTSAFTVY 41
>gi|427720157|ref|YP_007068151.1| rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 7507]
gi|427352593|gb|AFY35317.1| Rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 7507]
Length = 53
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Y+C CG++Y+ PF+++PD++ CPVCGA K F P
Sbjct: 4 YVCTVCGHVYDPEDGDPDAGIAPGTPFEEIPDDWVCPVCGATKDDFEP 51
>gi|336323903|ref|YP_004603870.1| rubredoxin-type Fe(Cys)4 protein [Flexistipes sinusarabici DSM
4947]
gi|336107484|gb|AEI15302.1| Rubredoxin-type Fe(Cys)4 protein [Flexistipes sinusarabici DSM
4947]
Length = 53
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPY 116
YIC CGYIY+ E P ++ +P+++ CP CGAPK F PY
Sbjct: 3 YICTICGYIYDPAEGDPDSGVEPGTKWEDVPEDWVCPECGAPKSSFEPY 51
>gi|85858911|ref|YP_461112.1| ferric-chelate reductase / rubredoxin [Syntrophus aciditrophicus
SB]
gi|85722002|gb|ABC76945.1| ferric-chelate reductase / Rubredoxin [Syntrophus aciditrophicus
SB]
Length = 236
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 14/62 (22%)
Query: 64 SAAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRR 112
+AAP+ ++ + Y C CGY+Y+ + F+ LPD++ CP+CGA K +
Sbjct: 175 TAAPQTGGKM---EKYTCTICGYVYDPEQGDPESGIAPGTAFEDLPDDWTCPICGADKSQ 231
Query: 113 FR 114
F
Sbjct: 232 FE 233
>gi|119491039|ref|ZP_01623197.1| rubredoxin [Lyngbya sp. PCC 8106]
gi|119453584|gb|EAW34744.1| rubredoxin [Lyngbya sp. PCC 8106]
Length = 113
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 13/48 (27%)
Query: 79 YICRDCGYIYNERK-------------PFDQLPDNYFCPVCGAPKRRF 113
Y CR CGY+Y K PF+++P + CPVCGAP+ +F
Sbjct: 14 YECRACGYVYEPTKGTSMGKVAVSAGTPFEEIPAGWRCPVCGAPRSQF 61
>gi|75760342|ref|ZP_00740389.1| Rubredoxin [Bacillus thuringiensis serovar israelensis ATCC 35646]
gi|228905489|ref|ZP_04069441.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus thuringiensis IBL 4222]
gi|228911544|ref|ZP_04075334.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus thuringiensis IBL 200]
gi|423416199|ref|ZP_17393318.1| hypothetical protein IE1_05502 [Bacillus cereus BAG3O-2]
gi|423433696|ref|ZP_17410699.1| hypothetical protein IE7_05511 [Bacillus cereus BAG4O-1]
gi|423566263|ref|ZP_17542537.1| hypothetical protein II5_05665 [Bacillus cereus MSX-A1]
gi|74492165|gb|EAO55334.1| Rubredoxin [Bacillus thuringiensis serovar israelensis ATCC 35646]
gi|228848108|gb|EEM92972.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus thuringiensis IBL 200]
gi|228854125|gb|EEM98831.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus thuringiensis IBL 4222]
gi|401093713|gb|EJQ01804.1| hypothetical protein IE1_05502 [Bacillus cereus BAG3O-2]
gi|401111504|gb|EJQ19396.1| hypothetical protein IE7_05511 [Bacillus cereus BAG4O-1]
gi|401192243|gb|EJQ99260.1| hypothetical protein II5_05665 [Bacillus cereus MSX-A1]
Length = 54
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIYN F+ LP+++ CPVCG K F P
Sbjct: 2 KKYICLPCGYIYNPEVGDPDEDIEPGTSFEDLPEDWVCPVCGEDKNHFAP 51
>gi|307154238|ref|YP_003889622.1| rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7822]
gi|306984466|gb|ADN16347.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7822]
Length = 115
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
CR CGY+Y +K PF++LP ++ CPVCG PK +F
Sbjct: 20 CRACGYVYEPKKGDGKGNIPSGTPFEELPVSWRCPVCGVPKSQF 63
>gi|166366048|ref|YP_001658321.1| membrane-associated rubredoxin [Microcystis aeruginosa NIES-843]
gi|390440287|ref|ZP_10228630.1| Rubredoxin [Microcystis sp. T1-4]
gi|422304297|ref|ZP_16391644.1| Rubredoxin [Microcystis aeruginosa PCC 9806]
gi|425439197|ref|ZP_18819528.1| Rubredoxin [Microcystis aeruginosa PCC 9717]
gi|425453414|ref|ZP_18833172.1| Rubredoxin [Microcystis aeruginosa PCC 9807]
gi|425466609|ref|ZP_18845907.1| Rubredoxin [Microcystis aeruginosa PCC 9809]
gi|166088421|dbj|BAG03129.1| membrane-associated rubredoxin [Microcystis aeruginosa NIES-843]
gi|389714869|emb|CCI00586.1| Rubredoxin [Microcystis aeruginosa PCC 9717]
gi|389790617|emb|CCI13521.1| Rubredoxin [Microcystis aeruginosa PCC 9806]
gi|389804480|emb|CCI16482.1| Rubredoxin [Microcystis aeruginosa PCC 9807]
gi|389830834|emb|CCI26899.1| Rubredoxin [Microcystis aeruginosa PCC 9809]
gi|389836297|emb|CCI32756.1| Rubredoxin [Microcystis sp. T1-4]
Length = 115
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 67 PKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
P+ ++ + Y CR CGY+Y+ K PF++LP+ + CPVCG + +F
Sbjct: 6 PELTLADQAPANYECRSCGYVYDPSKGDSKTNTPAGTPFEELPETWRCPVCGVRRSQF-- 63
Query: 116 YTPAVTRGANDTAVRKARKEQIQRDEAIGKALPI---AIAVAAVALAGLYF 163
+ GA D +E + + + P + A+AL ++F
Sbjct: 64 ----INIGAKDAP--SGFQENLSYGFGVNRLTPAQKNILIFGALALGFVFF 108
>gi|148242228|ref|YP_001227385.1| rubrerythrin [Synechococcus sp. RCC307]
gi|147850538|emb|CAK28032.1| Rubrerythrin [Synechococcus sp. RCC307]
Length = 244
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ + PF+ +P+++ C +CGA K F PY P + A
Sbjct: 188 WICKVCSMIYDPKDGDPDSGIAPGTPFEDIPEDWVCTICGARKSSFVPYRPVDLKAA 244
>gi|78484383|ref|YP_390308.1| rubredoxin-type Fe(Cys)4 protein [Thiomicrospira crunogena XCL-2]
gi|78362669|gb|ABB40634.1| Rubredoxin-type Fe(Cys)4 protein [Thiomicrospira crunogena XCL-2]
Length = 455
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAND 126
YIC+ CG IY+E F+ +P++++CP+C K F P A + + D
Sbjct: 8 YICKTCGLIYDEELGDPDSGLAPGTRFEDIPEDWYCPLCLVSKSDFIPLDQAKVKSSPD 66
>gi|150021082|ref|YP_001306436.1| rubredoxin-type Fe(Cys)4 protein [Thermosipho melanesiensis BI429]
gi|149793603|gb|ABR31051.1| Rubredoxin-type Fe(Cys)4 protein [Thermosipho melanesiensis BI429]
Length = 52
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ PF++LP+++ CPVCG K +F
Sbjct: 4 YVCTVCGYIYDPEVGDPDNGIEPGTPFEKLPEDWVCPVCGVGKDQF 49
>gi|154249364|ref|YP_001410189.1| rubredoxin-type Fe(Cys)4 protein [Fervidobacterium nodosum Rt17-B1]
gi|154153300|gb|ABS60532.1| Rubredoxin-type Fe(Cys)4 protein [Fervidobacterium nodosum Rt17-B1]
Length = 53
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIY-----------NERKPFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGYIY N PF+ LPD++ CPVCG K F P
Sbjct: 3 YRCTVCGYIYDPEVGDPDSGINPGTPFENLPDDWTCPVCGVSKDMFEP 50
>gi|443327416|ref|ZP_21056041.1| rubredoxin [Xenococcus sp. PCC 7305]
gi|442792944|gb|ELS02406.1| rubredoxin [Xenococcus sp. PCC 7305]
Length = 131
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 20/69 (28%)
Query: 56 PHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCP 104
P Q++ LA AP ++ CR CGY+Y K F +LP + CP
Sbjct: 20 PGQEKTLAEQAP---------SSHECRSCGYVYEPEKGDNQGKIAPGTLFTELPKTWRCP 70
Query: 105 VCGAPKRRF 113
+CGAP +F
Sbjct: 71 ICGAPTSQF 79
>gi|325959835|ref|YP_004291301.1| (S)-2-hydroxy-acid oxidase [Methanobacterium sp. AL-21]
gi|325331267|gb|ADZ10329.1| (S)-2-hydroxy-acid oxidase [Methanobacterium sp. AL-21]
Length = 419
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 12/54 (22%)
Query: 79 YICRDCG-YIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
YIC C YIY+E K +++PD++ CPVCG PK +P +
Sbjct: 3 YICSYCNIYIYDEEKGDLETKLEPGTTLEEIPDSWLCPVCGMPKEYLKPVNNKI 56
>gi|345857805|ref|ZP_08810230.1| rubredoxin-2 [Desulfosporosinus sp. OT]
gi|344329118|gb|EGW40471.1| rubredoxin-2 [Desulfosporosinus sp. OT]
Length = 58
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 83 DCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+CGYIYN K PF++LPD + CP+CG K+ F+P
Sbjct: 14 NCGYIYNPEKGCKKSKIPKDVPFEELPDTWRCPLCGVGKKMFKP 57
>gi|304383674|ref|ZP_07366133.1| rubredoxin [Prevotella marshii DSM 16973]
gi|304335198|gb|EFM01469.1| rubredoxin [Prevotella marshii DSM 16973]
Length = 55
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGYIY+ ++ F+ +PD++ CP+CG K F P
Sbjct: 3 KKYVCVPCGYIYDPKEGDPDGGIAPGTAFEDIPDDWVCPICGVGKDEFEP 52
>gi|167761532|ref|ZP_02433659.1| hypothetical protein CLOSCI_03943 [Clostridium scindens ATCC 35704]
gi|336422631|ref|ZP_08602774.1| rubredoxin [Lachnospiraceae bacterium 5_1_57FAA]
gi|167661198|gb|EDS05328.1| rubredoxin [Clostridium scindens ATCC 35704]
gi|336007804|gb|EGN37825.1| rubredoxin [Lachnospiraceae bacterium 5_1_57FAA]
Length = 53
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Q Y+C CGY+Y+ PF+ +PD++ CP+CG K F
Sbjct: 2 QKYLCEPCGYVYDPEIGDPDGGIAPGTPFEDIPDDWVCPICGMGKEVF 49
>gi|423617205|ref|ZP_17593039.1| hypothetical protein IIO_02531 [Bacillus cereus VD115]
gi|401256390|gb|EJR62600.1| hypothetical protein IIO_02531 [Bacillus cereus VD115]
Length = 54
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIY+ + FD LP+++ CPVCG +F P
Sbjct: 2 KKYICLPCGYIYDPKIGDPDEGIEPGTSFDDLPEDWVCPVCGEDNEQFAP 51
>gi|325958758|ref|YP_004290224.1| rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. AL-21]
gi|325330190|gb|ADZ09252.1| Rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. AL-21]
Length = 55
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ Y C CGY+Y+ K F+ LPD +FCP CGA KRRF+
Sbjct: 2 ERYRCGICGYVYDPEKGESRNNTAPGTDFEDLPDMWFCPSCGAAKRRFK 50
>gi|57640459|ref|YP_182937.1| rubredoxin [Thermococcus kodakarensis KOD1]
gi|57158783|dbj|BAD84713.1| rubredoxin [Thermococcus kodakarensis KOD1]
Length = 53
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E + F+ LPD++ CP+CGAPK F
Sbjct: 6 CIVCGYIYDEDEGDPDSGIAPGTKFEDLPDDWVCPLCGAPKDMF 49
>gi|333987442|ref|YP_004520049.1| rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. SWAN-1]
gi|333825586|gb|AEG18248.1| Rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. SWAN-1]
Length = 56
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIY-----------NERKPFDQLPDNYFCPVCGAPKRRFR 114
Y C CGY Y N PF++LPDN+ CP CGA K RFR
Sbjct: 4 YKCSICGYTYDPEVGDSRRGINPGTPFEELPDNWSCPHCGAGKIRFR 50
>gi|341581227|ref|YP_004761719.1| rubredoxin [Thermococcus sp. 4557]
gi|340808885|gb|AEK72042.1| rubredoxin [Thermococcus sp. 4557]
Length = 53
Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E + F++LP+++ CP+CGAPK F
Sbjct: 6 CMVCGYIYDEDEGDEDAGIAPGTKFEELPEDWVCPLCGAPKDMF 49
>gi|75910621|ref|YP_324917.1| rubrerythrin [Anabaena variabilis ATCC 29413]
gi|75704346|gb|ABA24022.1| Rubrerythrin [Anabaena variabilis ATCC 29413]
Length = 237
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
+ICR C IY+ PF+ +PD++ CP+CGA K+ F+
Sbjct: 183 WICRQCSMIYDPVAGDPDSGIAPGTPFEDIPDDWQCPICGATKKTFK 229
>gi|373500995|ref|ZP_09591363.1| rubredoxin [Prevotella micans F0438]
gi|371950847|gb|EHO68699.1| rubredoxin [Prevotella micans F0438]
Length = 55
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CG++Y+ PFD+LP+++ CP CG K F P
Sbjct: 3 QKYVCDVCGWVYDPAVGDPDNGIEPGTPFDKLPEDWVCPECGVGKSEFSP 52
>gi|434400868|ref|YP_007134872.1| Rubredoxin-type Fe(Cys)4 protein [Stanieria cyanosphaera PCC 7437]
gi|428271965|gb|AFZ37906.1| Rubredoxin-type Fe(Cys)4 protein [Stanieria cyanosphaera PCC 7437]
Length = 115
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 20/72 (27%)
Query: 53 LSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKP-----------FDQLPDNY 101
+S P Q++ LA AP +Y CR CGY+Y K F LPD +
Sbjct: 1 MSNPGQEKTLAEQAPA---------SYECRSCGYVYEPAKGDNQTNISPGTLFTDLPDTW 51
Query: 102 FCPVCGAPKRRF 113
CPVC A K +F
Sbjct: 52 RCPVCKARKTQF 63
>gi|304437117|ref|ZP_07397079.1| rubredoxin [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304369876|gb|EFM23539.1| rubredoxin [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 53
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ ++C CG++Y+E K FD LPD++ CP+CG K F
Sbjct: 2 KTWVCSVCGWVYDEAKGDPDYDLAPGVAFDDLPDDFVCPLCGVDKSMF 49
>gi|422296046|gb|EKU23345.1| hypothetical protein NGA_0717900 [Nannochloropsis gaditana CCMP526]
Length = 149
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 79 YICRDCGYIYNERKP----FDQLPDNYFCPVCGAPKRRF 113
++C DCGYIYNE F+ + CP C AP+RRF
Sbjct: 69 WVCADCGYIYNEADCGGMRFEDQKTGFKCPQCSAPRRRF 107
>gi|193212654|ref|YP_001998607.1| GCN5-like N-acetyltransferase [Chlorobaculum parvum NCIB 8327]
gi|193086131|gb|ACF11407.1| GCN5-related N-acetyltransferase [Chlorobaculum parvum NCIB 8327]
Length = 225
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPY 116
QA++C +CGYIY+ + FD+LP ++ CPVC +F+ +
Sbjct: 171 QAWMCEECGYIYDPAEGDLETNIPPGVCFDKLPGDWCCPVCNGAMSQFKKF 221
>gi|159905035|ref|YP_001548697.1| rubredoxin-type Fe(Cys)4 protein [Methanococcus maripaludis C6]
gi|159886528|gb|ABX01465.1| Rubredoxin-type Fe(Cys)4 protein [Methanococcus maripaludis C6]
Length = 45
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 81 CRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
C CGY Y+E K F +LPD + CP+CGA K F
Sbjct: 6 CTICGYEYDEEKEGKKFSELPDTWTCPICGAKKSAF 41
>gi|145346812|ref|XP_001417876.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578104|gb|ABO96169.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 144
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
Y+C DCGY+Y F +LP++Y CP C K RF+
Sbjct: 54 YVCVDCGYVYRG-GDFKKLPNSYRCPTCNVGKNRFK 88
>gi|404369515|ref|ZP_10974849.1| rubredoxin [Clostridium sp. 7_2_43FAA]
gi|226914539|gb|EEH99740.1| rubredoxin [Clostridium sp. 7_2_43FAA]
Length = 54
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q YIC C Y+Y+ F+ LPD++ CPVCGA K F P
Sbjct: 2 QKYICVPCTYVYDPEYGDPDNGIDPDTAFEDLPDDWVCPVCGASKDEFEP 51
>gi|150015355|ref|YP_001307609.1| rubredoxin-type Fe(Cys)4 protein [Clostridium beijerinckii NCIMB
8052]
gi|149901820|gb|ABR32653.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium beijerinckii NCIMB
8052]
Length = 53
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ YIC CGYIY+E F+ +P+++ CP+CG PK F
Sbjct: 2 EKYICTVCGYIYDEAAGDPDNGVAPGTKFEDIPEDWVCPLCGVPKSDF 49
>gi|306820068|ref|ZP_07453716.1| rubredoxin [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|402310560|ref|ZP_10829524.1| rubredoxin [Eubacterium sp. AS15]
gi|304551846|gb|EFM39789.1| rubredoxin [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|400368483|gb|EJP21494.1| rubredoxin [Eubacterium sp. AS15]
Length = 53
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+Y+ F+ LPD++ CP+CG K F P
Sbjct: 2 QKYVCDVCGYVYDPAVGDEDNGIAPGTSFEDLPDSWVCPICGVEKDSFSP 51
>gi|452991806|emb|CCQ96765.1| rubredoxin [Clostridium ultunense Esp]
Length = 53
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ + PF++LP+++ CPVCGA K F
Sbjct: 4 YVCEPCGYVYDPAEGDPDNGIEPGTPFEKLPEDWVCPVCGATKDMF 49
>gi|374992951|ref|YP_004968450.1| rubredoxin [Desulfosporosinus orientis DSM 765]
gi|357211317|gb|AET65935.1| rubredoxin [Desulfosporosinus orientis DSM 765]
Length = 58
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 11/43 (25%)
Query: 84 CGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
CGYIYN K PF++LP+++ CP+CGA K+ F+P
Sbjct: 15 CGYIYNPEKGCKKSKIPRDVPFEELPEDWRCPLCGAGKKMFKP 57
>gi|333987446|ref|YP_004520053.1| rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. SWAN-1]
gi|333825590|gb|AEG18252.1| Rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. SWAN-1]
Length = 53
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ +IC CGY+Y+ + PF++LPD++ CP+CG K +F
Sbjct: 2 KKFICTVCGYVYDPDEGDPNSGIEAGTPFEKLPDDWCCPLCGVGKDKF 49
>gi|227501235|ref|ZP_03931284.1| rubredoxin [Anaerococcus tetradius ATCC 35098]
gi|227216636|gb|EEI82040.1| rubredoxin [Anaerococcus tetradius ATCC 35098]
Length = 59
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 72 RVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
R S Y+C CGYIY+ + FDQLP+++ CPVCG K F
Sbjct: 4 RRHSNMKYVCTACGYIYDPAEGDVDNGIEAGTEFDQLPEDWTCPVCGVGKDMFE 57
>gi|167754543|ref|ZP_02426670.1| hypothetical protein CLORAM_00045 [Clostridium ramosum DSM 1402]
gi|365830791|ref|ZP_09372354.1| hypothetical protein HMPREF1021_01118 [Coprobacillus sp. 3_3_56FAA]
gi|374627288|ref|ZP_09699695.1| hypothetical protein HMPREF0978_03015 [Coprobacillus sp.
8_2_54BFAA]
gi|167705375|gb|EDS19954.1| rubredoxin [Clostridium ramosum DSM 1402]
gi|365262801|gb|EHM92673.1| hypothetical protein HMPREF1021_01118 [Coprobacillus sp. 3_3_56FAA]
gi|373913311|gb|EHQ45149.1| hypothetical protein HMPREF0978_03015 [Coprobacillus sp.
8_2_54BFAA]
Length = 225
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 79 YICRDCGYIYNE---RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRK 131
Y+C+ CG+IY+E ++ L ++ CPVC APK +F T T K
Sbjct: 3 YVCKICGFIYDEATQDAKWNDLDTDWVCPVCKAPKEKFEAVAETSTSKYAGTKTEK 58
>gi|387815244|ref|YP_005430733.1| Rubredoxin 2 (Two-iron rubredoxin) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381340263|emb|CCG96310.1| Rubredoxin 2 (Two-iron rubredoxin) [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 172
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 6 PTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASA 65
P ++S TN++ P A T G + A + S PS P + + +S
Sbjct: 58 PELSVSATNTAVRPASQAKT---EGASQKA------TDASTPSAKNKTKPKAKPKPTSSK 108
Query: 66 APKFSMRVASKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
+PK S + + + ++C CG+IY+E F+ +PD++ CP CGA K +
Sbjct: 109 SPKDSTQKDTYRKWVCITCGHIYDEALGDEAEGFPAGTRFEDIPDDWCCPDCGATKEDYV 168
Query: 115 PY 116
Y
Sbjct: 169 LY 170
>gi|307153299|ref|YP_003888683.1| rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7822]
gi|306983527|gb|ADN15408.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7822]
Length = 237
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRF 113
+ICR C IY+ PF+++P+++ CP+CGA K+ F
Sbjct: 183 WICRVCSMIYDPVVGDPDSGIAAGTPFEEIPEDWHCPICGASKKSF 228
>gi|189345726|ref|YP_001942255.1| rubredoxin-type Fe(Cys)4 protein [Chlorobium limicola DSM 245]
gi|189339873|gb|ACD89276.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobium limicola DSM 245]
Length = 58
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
Q ++C CGY+Y+ F+ +PD++ CPVCG K F PY
Sbjct: 2 QKWVCVPCGYVYDPEVGDLDGGVEPGTAFEDIPDDWVCPVCGVDKTLFEPY 52
>gi|87302052|ref|ZP_01084886.1| rubrerythrin [Synechococcus sp. WH 5701]
gi|87283620|gb|EAQ75575.1| rubrerythrin [Synechococcus sp. WH 5701]
Length = 237
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPY 116
+IC+ C IY+ PF+ +PD++ CP+CG K F PY
Sbjct: 181 WICKACSMIYDPAIGDPDSGIAAGTPFEAIPDDWECPICGVRKASFEPY 229
>gi|304440012|ref|ZP_07399905.1| rubredoxin [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371504|gb|EFM25117.1| rubredoxin [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 53
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y C+ CGYIY+ F+ LP+++ CP+CGA K F P
Sbjct: 2 QKYECQLCGYIYDPELGDEDSGIEPGTAFENLPEDWVCPLCGAEKSDFEP 51
>gi|119356064|ref|YP_910708.1| rubredoxin-type Fe(Cys)4 protein [Chlorobium phaeobacteroides DSM
266]
gi|119353413|gb|ABL64284.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobium phaeobacteroides DSM
266]
Length = 58
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
+ ++C CGY+Y+ PF+ +PD++ CPVCG K F PY
Sbjct: 2 EKWVCVPCGYVYDPEIGDPDSGVEPGTPFENIPDDWCCPVCGVDKSLFEPY 52
>gi|365163224|ref|ZP_09359340.1| hypothetical protein HMPREF1014_04803 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363616742|gb|EHL68177.1| hypothetical protein HMPREF1014_04803 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 54
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGY+YN F+ LP+++ CPVCG K F P
Sbjct: 2 KKYICLPCGYVYNPEVGDPDEDIEPGTSFEDLPEDWVCPVCGEDKNHFAP 51
>gi|352095654|ref|ZP_08956668.1| Rubredoxin-type Fe(Cys)4 protein [Synechococcus sp. WH 8016]
gi|351678796|gb|EHA61941.1| Rubredoxin-type Fe(Cys)4 protein [Synechococcus sp. WH 8016]
Length = 237
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ + PF+ +PD++ CP+CG K F PY A + A
Sbjct: 181 WICKVCSMIYDPAEGDPDSGIAPGTPFEAIPDDWSCPICGVRKASFVPYREAELKAA 237
>gi|193213541|ref|YP_001999494.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobaculum parvum NCIB 8327]
gi|193087018|gb|ACF12294.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobaculum parvum NCIB 8327]
Length = 53
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+Y+ PF+ LP+++ CPVCG K F P
Sbjct: 2 QKYVCVPCGYVYDPADGDPNNGIDPGTPFEDLPEDWVCPVCGVDKSLFEP 51
>gi|147838080|emb|CAN65205.1| hypothetical protein VITISV_016717 [Vitis vinifera]
Length = 167
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Query: 52 LLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDN 100
L SPP + + + V + Y CR CGY Y+E FD+LPD+
Sbjct: 45 LDSPPQEPENFDKRRLEEKFAVLNTGIYECRSCGYKYDEAAGDPSYPIPPGLQFDKLPDD 104
Query: 101 YFCPVCGAPKRRFR 114
+ CP CGA + F
Sbjct: 105 WRCPTCGAARSFFE 118
>gi|427708099|ref|YP_007050476.1| rubredoxin-type Fe(Cys)4 protein [Nostoc sp. PCC 7107]
gi|427360604|gb|AFY43326.1| Rubredoxin-type Fe(Cys)4 protein [Nostoc sp. PCC 7107]
Length = 54
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGY+Y+ PF+ +P+++ CPVCGA K +F P
Sbjct: 2 ETYECTICGYVYDPEVGDPEGGIAPGTPFEDIPEDWVCPVCGATKDQFEP 51
>gi|334119898|ref|ZP_08493982.1| Rubredoxin-type Fe(Cys)4 protein [Microcoleus vaginatus FGP-2]
gi|333457539|gb|EGK86162.1| Rubredoxin-type Fe(Cys)4 protein [Microcoleus vaginatus FGP-2]
Length = 52
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C C Y+Y+ PF+ +PD++ CP CGA K F+P
Sbjct: 2 QKYVCTVCNYVYDPEVGDPDGDIAPGTPFEDIPDDWVCPTCGAKKSDFQP 51
>gi|258514815|ref|YP_003191037.1| rubredoxin-type Fe(Cys)4 protein [Desulfotomaculum acetoxidans DSM
771]
gi|257778520|gb|ACV62414.1| Rubredoxin-type Fe(Cys)4 protein [Desulfotomaculum acetoxidans DSM
771]
Length = 50
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 9/46 (19%)
Query: 77 QAYICRDCGYIYNERK---------PFDQLPDNYFCPVCGAPKRRF 113
+ ++C CGY+Y+ + PF++LP+++ CPVCG K F
Sbjct: 2 EKWVCNVCGYVYDPVEGANGVTPGTPFEELPEDWVCPVCGVGKDEF 47
>gi|374606791|ref|ZP_09679614.1| Rubredoxin 3 (Rd 3) [Paenibacillus dendritiformis C454]
gi|374387626|gb|EHQ59125.1| Rubredoxin 3 (Rd 3) [Paenibacillus dendritiformis C454]
Length = 54
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC+ CGYIY+ F++LP+++ CPVCG K +F P
Sbjct: 2 KKYICQPCGYIYDPSVGDPDEDILPGTAFEELPEDWVCPVCGEDKSQFAP 51
>gi|206900685|ref|YP_002251682.1| rubredoxin [Dictyoglomus thermophilum H-6-12]
gi|206739788|gb|ACI18846.1| rubredoxin [Dictyoglomus thermophilum H-6-12]
Length = 52
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGY+Y+ + PF++LP+++ CPVCGA K F+P
Sbjct: 4 YRCVVCGYVYDPEEGDPEGNIPPGTPFEELPEDWVCPVCGADKSMFKP 51
>gi|145220424|ref|YP_001131133.1| rubredoxin-type Fe(Cys)4 protein [Chlorobium phaeovibrioides DSM
265]
gi|145206588|gb|ABP37631.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobium phaeovibrioides DSM
265]
Length = 55
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
+ ++C CGY+Y+ F+ +PD++ CPVCG K F PY+
Sbjct: 2 EKWVCVPCGYVYDPEVGDPDSGVAPGTAFEDIPDDWVCPVCGVDKTLFEPYS 53
>gi|409990499|ref|ZP_11273864.1| rubredoxin [Arthrospira platensis str. Paraca]
gi|291566377|dbj|BAI88649.1| rubredoxin [Arthrospira platensis NIES-39]
gi|409938634|gb|EKN79933.1| rubredoxin [Arthrospira platensis str. Paraca]
Length = 111
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 72 RVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V S Y C CGY+Y K F+ LP + CPVCGAP+ +FR
Sbjct: 7 EVKSPDRYECNACGYVYEPSKGSSTGNIPPGTEFEDLPTRWRCPVCGAPRSQFR 60
>gi|242399868|ref|YP_002995293.1| Rubredoxin [Thermococcus sibiricus MM 739]
gi|242266262|gb|ACS90944.1| Rubredoxin [Thermococcus sibiricus MM 739]
Length = 54
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E F+++PD++ CP+CGAPK F
Sbjct: 6 CMVCGYIYDEEAGDPESGVAPGTRFEEIPDDWVCPLCGAPKDMF 49
>gi|428217030|ref|YP_007101495.1| rubredoxin-type Fe(Cys)4 protein [Pseudanabaena sp. PCC 7367]
gi|427988812|gb|AFY69067.1| Rubredoxin-type Fe(Cys)4 protein [Pseudanabaena sp. PCC 7367]
Length = 53
Score = 43.9 bits (102), Expect = 0.025, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y C CGYIY+ + F+ +PD++ CP CGA K F+P
Sbjct: 2 QKYKCSACGYIYDPEQGDPDGGIDPGTAFEDIPDDWVCPTCGASKSSFKP 51
>gi|120553376|ref|YP_957727.1| rubredoxin-type Fe(Cys)4 protein [Marinobacter aquaeolei VT8]
gi|120323225|gb|ABM17540.1| Rubredoxin-type Fe(Cys)4 protein [Marinobacter aquaeolei VT8]
Length = 172
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 6 PTRALSTTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASA 65
P ++S TN++ P A T G + A + S PS P + + +S
Sbjct: 58 PELSVSATNTAVRPASQAKT---EGASQKA------TGASTPSAKNKTKPKAKPKPNSSK 108
Query: 66 APKFSMRVASKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
+PK S + + + ++C CG+IY+E F+ +PD++ CP CGA K +
Sbjct: 109 SPKDSTQKDTYRKWVCITCGHIYDEALGDEAEGFPAGTRFEDIPDDWCCPDCGATKEDYV 168
Query: 115 PY 116
Y
Sbjct: 169 LY 170
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 15/75 (20%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKR----RFRPYTPAVTRG 123
Y C DCGY+Y+E ++++P+++ CP C + + P ++
Sbjct: 4 YQCPDCGYVYDEVVGDPHEGFPAGTTWEKIPEDWSCPDCAVRDKVDFVALQEANPELSVS 63
Query: 124 ANDTAVRKARKEQIQ 138
A +TAVR A + + +
Sbjct: 64 ATNTAVRPASQAKTE 78
>gi|428301816|ref|YP_007140122.1| rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 6303]
gi|428238360|gb|AFZ04150.1| Rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 6303]
Length = 237
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 62 LASAAPKFSMRVAS--KQAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGA 108
L AP M+ + Q +ICR C IY+ F +P+++ CP+CGA
Sbjct: 164 LDGTAPVVKMQTGNPATQKWICRQCSMIYDPVVGDVDSGIAAGTAFADIPEDWRCPICGA 223
Query: 109 PKRRFRPYTPA 119
K+ F Y A
Sbjct: 224 TKKTFVVYEEA 234
>gi|427734734|ref|YP_007054278.1| rubrerythrin [Rivularia sp. PCC 7116]
gi|427369775|gb|AFY53731.1| rubrerythrin [Rivularia sp. PCC 7116]
Length = 240
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPY 116
Q +ICR C IY+ F+ +P+++ CP+C A K+ F PY
Sbjct: 181 QKWICRQCSMIYDPVVGDPDSGIAPGTAFEDIPEDWHCPICNATKKTFMPY 231
>gi|332706506|ref|ZP_08426567.1| rubredoxin [Moorea producens 3L]
gi|332354390|gb|EGJ33869.1| rubredoxin [Moorea producens 3L]
Length = 115
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
Query: 62 LASAAPKFSMRVASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPK 110
+ AP+ ++ + +Y CR CGY+Y+ K + LPD++ CPVC APK
Sbjct: 1 MTERAPEQTLAEQAPSSYECRACGYVYDPTKGDSNRNVPGGTLYKDLPDDWRCPVCSAPK 60
Query: 111 RRF 113
+F
Sbjct: 61 IQF 63
>gi|289523432|ref|ZP_06440286.1| rubredoxin [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503124|gb|EFD24288.1| rubredoxin [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 52
Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y+C CGY+Y+ + FD LPD++ CPVCG K F P
Sbjct: 3 YVCTVCGYVYDPAQGDPDSGISPGTAFDDLPDDWVCPVCGVGKDMFEP 50
>gi|319938169|ref|ZP_08012567.1| rubredoxin [Coprobacillus sp. 29_1]
gi|319806690|gb|EFW03339.1| rubredoxin [Coprobacillus sp. 29_1]
Length = 53
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+E FD+LPD++ CP+CG +F
Sbjct: 3 YVCDVCGYIYDEDLGDPDNGIAAGTKFDKLPDDWVCPLCGVGTDQF 48
>gi|297570498|ref|YP_003691842.1| Rubredoxin-type Fe(Cys)4 protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296926413|gb|ADH87223.1| Rubredoxin-type Fe(Cys)4 protein [Desulfurivibrio alkaliphilus
AHT2]
Length = 53
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y C CGYIY+ F +LP+N+ CP+CGA K +F P
Sbjct: 2 QKYECNVCGYIYDPETGDRENGIEPGTAFAELPENWSCPICGADKSQFSP 51
>gi|225017520|ref|ZP_03706712.1| hypothetical protein CLOSTMETH_01447 [Clostridium methylpentosum
DSM 5476]
gi|224949670|gb|EEG30879.1| hypothetical protein CLOSTMETH_01447 [Clostridium methylpentosum
DSM 5476]
Length = 212
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
K +Y+C CGY+Y Q PD+Y CP+CG P+ +F
Sbjct: 174 KISYVCPVCGYVY--EGDITQEPDDYVCPLCGVPRDQF 209
>gi|423064727|ref|ZP_17053517.1| hypothetical protein SPLC1_S205390 [Arthrospira platensis C1]
gi|406713970|gb|EKD09138.1| hypothetical protein SPLC1_S205390 [Arthrospira platensis C1]
Length = 193
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 72 RVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V S Y C CGY+Y K F+ LP + CPVCGAP+ +FR
Sbjct: 89 EVKSPDRYECNACGYVYEPSKGSSTGNIPPGTEFEDLPARWRCPVCGAPRSQFR 142
>gi|113953323|ref|YP_731969.1| rubredoxin [Synechococcus sp. CC9311]
gi|113880674|gb|ABI45632.1| rubredoxin [Synechococcus sp. CC9311]
Length = 237
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ + PF+ +PD++ CP+CG K F PY A + A
Sbjct: 181 WICKVCSMIYDPAEGDPDSGIAPGTPFEAIPDDWSCPICGVRKASFVPYREAELKSA 237
>gi|383786154|ref|YP_005470723.1| rubredoxin [Fervidobacterium pennivorans DSM 9078]
gi|383109001|gb|AFG34604.1| rubredoxin [Fervidobacterium pennivorans DSM 9078]
Length = 53
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGYIY+ PF+ LPD++ CPVCG K F P
Sbjct: 3 YRCTVCGYIYDPEVGDPDSGIEPGTPFENLPDDWTCPVCGVSKDMFEP 50
>gi|300865677|ref|ZP_07110446.1| rubrerythrin [Oscillatoria sp. PCC 6506]
gi|300336330|emb|CBN55596.1| rubrerythrin [Oscillatoria sp. PCC 6506]
Length = 245
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
+IC+ C IY+ F+ +PD++ CP+CGA K+ F P+ V
Sbjct: 191 WICKQCSMIYDPVVGDPDSGIAPGTLFEDIPDDWVCPICGAEKKLFMPFEEKV 243
>gi|120553545|ref|YP_957896.1| rubredoxin-type Fe(Cys)4 protein [Marinobacter aquaeolei VT8]
gi|120323394|gb|ABM17709.1| Rubredoxin-type Fe(Cys)4 protein [Marinobacter aquaeolei VT8]
Length = 172
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 45 SAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNE-----------RKP 93
S PS P + + +S +PK S + + + ++C CG+IY+E
Sbjct: 88 STPSAKNKTKPKAKPKPTSSKSPKDSTQKDTYRKWVCITCGHIYDEALGDEAEGFPAGTR 147
Query: 94 FDQLPDNYFCPVCGAPKRRFRPY 116
F+ +PD++ CP CGA K + Y
Sbjct: 148 FEDIPDDWCCPDCGATKEDYVLY 170
>gi|224036059|gb|ACN37105.1| unknown [Zea mays]
gi|414591476|tpg|DAA42047.1| TPA: hypothetical protein ZEAMMB73_699413 [Zea mays]
Length = 173
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 5/51 (9%)
Query: 41 KSSFSAP-SLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNE 90
+ SFSAP SL L P + + A + +MRVASKQAYICRDCG++ +
Sbjct: 21 RPSFSAPWSLRL----PAPARRRVATAARITMRVASKQAYICRDCGWVSHS 67
>gi|429726004|ref|ZP_19260815.1| rubredoxin [Prevotella sp. oral taxon 473 str. F0040]
gi|429148336|gb|EKX91345.1| rubredoxin [Prevotella sp. oral taxon 473 str. F0040]
Length = 54
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPY 116
Q Y+C CGYIY+ E P F+ +P+++ CP+CG K F PY
Sbjct: 2 QKYLCEPCGYIYDPAEGDPDSGIAPGTAFEDIPEDWCCPICGVTKEDFVPY 52
>gi|222054120|ref|YP_002536482.1| rubredoxin-type Fe(Cys)4 protein [Geobacter daltonii FRC-32]
gi|221563409|gb|ACM19381.1| Rubredoxin-type Fe(Cys)4 protein [Geobacter daltonii FRC-32]
Length = 52
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGY+Y+ PF LP+N+ CP+CGA K F P
Sbjct: 2 ERYVCTICGYVYDPAAGDLENGIDPGTPFSGLPENWVCPICGAGKDVFEP 51
>gi|95931210|ref|ZP_01313931.1| Rubredoxin-type Fe(Cys)4 protein [Desulfuromonas acetoxidans DSM
684]
gi|95132729|gb|EAT14407.1| Rubredoxin-type Fe(Cys)4 protein [Desulfuromonas acetoxidans DSM
684]
Length = 54
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPY 116
+ Y+C CGYIY+ E P F LPD++ CPVCG K F PY
Sbjct: 2 EKYVCGPCGYIYDPAEGDPDSGIAAGTAFADLPDDWVCPVCGVGKDAFDPY 52
>gi|427412491|ref|ZP_18902683.1| hypothetical protein HMPREF9282_00090 [Veillonella ratti
ACS-216-V-Col6b]
gi|425716298|gb|EKU79282.1| hypothetical protein HMPREF9282_00090 [Veillonella ratti
ACS-216-V-Col6b]
Length = 44
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 77 QAYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+E F+ PD+Y CP+CG K +F
Sbjct: 2 EKYVCVVCGWVYDEAVEGVKFEDQPDDYVCPICGVGKDQF 41
>gi|395005579|ref|ZP_10389454.1| rubredoxin [Acidovorax sp. CF316]
gi|394316506|gb|EJE53230.1| rubredoxin [Acidovorax sp. CF316]
Length = 57
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ + ++C CG+IY+E + P+DQ+P N+ CP CGA K F
Sbjct: 1 MTDSKTWMCLICGWIYDEAEGAPEHGIAPNTPWDQVPMNWTCPECGARKEDFE 53
>gi|375083340|ref|ZP_09730365.1| rubredoxin [Thermococcus litoralis DSM 5473]
gi|374741969|gb|EHR78382.1| rubredoxin [Thermococcus litoralis DSM 5473]
Length = 53
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E F+ LPD++ CP+CGAPK F
Sbjct: 6 CIVCGYIYDEEAGDPDSGVAPGTKFEDLPDDWVCPLCGAPKDMF 49
>gi|86609601|ref|YP_478363.1| rubredoxin [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558143|gb|ABD03100.1| rubredoxin [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 116
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
Q Y CR CGY+Y K PF++LP ++ CPVC A KR F+
Sbjct: 17 QRYECRSCGYVYEPAKGDQLNRIPAGVPFEELPADWKCPVCRAGKRSFQ 65
>gi|407642441|ref|YP_006806200.1| rubrerythrin [Nocardia brasiliensis ATCC 700358]
gi|407305325|gb|AFT99225.1| rubrerythrin [Nocardia brasiliensis ATCC 700358]
Length = 68
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 11/56 (19%)
Query: 73 VASKQAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPYT 117
V + +IC CG IY+ E P F +PD + CP CGA K F PYT
Sbjct: 12 VVVAELWICVTCGMIYDPAEGDPDGGIPPGTAFADIPDGWVCPTCGARKSDFIPYT 67
>gi|313672024|ref|YP_004050135.1| rubredoxin-type fe(cys)4 protein [Calditerrivibrio nitroreducens
DSM 19672]
gi|312938780|gb|ADR17972.1| Rubredoxin-type Fe(Cys)4 protein [Calditerrivibrio nitroreducens
DSM 19672]
Length = 53
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q YIC CGYIY+ ++ +PD++ CP CGAPK F P
Sbjct: 2 QKYICTICGYIYDPALGDPENDVAAGTKWEDVPDSWVCPECGAPKDSFEP 51
>gi|255526819|ref|ZP_05393718.1| flavin reductase domain protein FMN-binding [Clostridium
carboxidivorans P7]
gi|296186416|ref|ZP_06854819.1| rubredoxin [Clostridium carboxidivorans P7]
gi|255509498|gb|EET85839.1| flavin reductase domain protein FMN-binding [Clostridium
carboxidivorans P7]
gi|296048863|gb|EFG88294.1| rubredoxin [Clostridium carboxidivorans P7]
Length = 232
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFR 114
Y C CGYIY+ F+ +PDN+FCP+CG K F
Sbjct: 183 YKCTVCGYIYDPSVGDPDAGILPGTLFEDIPDNWFCPICGVTKDSFE 229
>gi|270156666|ref|ZP_06185323.1| rubredoxin [Legionella longbeachae D-4968]
gi|289164885|ref|YP_003455023.1| Rubredoxin (Rd) [Legionella longbeachae NSW150]
gi|269988691|gb|EEZ94945.1| rubredoxin [Legionella longbeachae D-4968]
gi|288858058|emb|CBJ11918.1| Rubredoxin (Rd) [Legionella longbeachae NSW150]
Length = 58
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERKPF-----------DQLPDNYFCPVCGAPKRRFR 114
+ YIC CG+IY+E + D +P+N+FCP CGA K F
Sbjct: 5 KKYICVICGFIYDEADGWPEDGIAAGTLWDDVPENWFCPDCGAGKEDFE 53
>gi|150020313|ref|YP_001305667.1| rubredoxin-type Fe(Cys)4 protein [Thermosipho melanesiensis BI429]
gi|149792834|gb|ABR30282.1| Rubredoxin-type Fe(Cys)4 protein [Thermosipho melanesiensis BI429]
Length = 52
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y N +P F++LP+N+ CPVCG K +F
Sbjct: 4 YVCSVCGYVYDPEVGDPDNGIEPGTSFEELPENWVCPVCGVGKDQF 49
>gi|255659414|ref|ZP_05404823.1| rubredoxin [Mitsuokella multacida DSM 20544]
gi|260848376|gb|EEX68383.1| rubredoxin [Mitsuokella multacida DSM 20544]
Length = 53
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ ++C CG+IY+E K PF LPD++ CP+CG K F
Sbjct: 2 KVWVCTVCGWIYDEAKGDPDYDLAPGVPFADLPDDFVCPLCGVGKDMF 49
>gi|432331333|ref|YP_007249476.1| thiamine pyrophosphate-dependent enzyme, possible carboligase or
decarboxylase [Methanoregula formicicum SMSP]
gi|432138042|gb|AGB02969.1| thiamine pyrophosphate-dependent enzyme, possible carboligase or
decarboxylase [Methanoregula formicicum SMSP]
Length = 590
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRF 113
+ C CGY+Y+E PF LPD++ CPVCGA K F
Sbjct: 4 WRCSVCGYLYDEAAGIPSAGIAAGTPFSGLPDDWTCPVCGAAKSVF 49
>gi|169334806|ref|ZP_02861999.1| hypothetical protein ANASTE_01212 [Anaerofustis stercorihominis DSM
17244]
gi|169257544|gb|EDS71510.1| rubredoxin [Anaerofustis stercorihominis DSM 17244]
Length = 209
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
Y+C CGY+Y D LP+NY CP+CGA +F+ A+
Sbjct: 171 YVCTVCGYVYEG----DPLPENYKCPICGAGPEKFKRVEEAIV 209
>gi|119509199|ref|ZP_01628349.1| Rubredoxin-type Fe(Cys)4 protein [Nodularia spumigena CCY9414]
gi|119466041|gb|EAW46928.1| Rubredoxin-type Fe(Cys)4 protein [Nodularia spumigena CCY9414]
Length = 58
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTP 118
+ Y+C CGY Y+ PF +P+++ CPVCGA K F P P
Sbjct: 2 EEYVCTVCGYEYDPEIGDPDSGIAPGTPFKDIPEDWVCPVCGATKDLFEPLVP 54
>gi|376296535|ref|YP_005167765.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio desulfuricans
ND132]
gi|323459097|gb|EGB14962.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio desulfuricans
ND132]
Length = 149
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+Y+ + F+ LPD++ CPVCGA K F P
Sbjct: 98 QKYVCEICGYVYDPAEGDSDADIPAGTKFEDLPDDWTCPVCGAGKDSFVP 147
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 14/61 (22%)
Query: 76 KQAYICR--DCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYT-PAVT 121
++ Y C+ +CGYIYN K F+ LPD++ CP+CG K+ FRP P T
Sbjct: 5 EEMYQCQTVNCGYIYNPDKGDRKGKIPKGTRFEDLPDDWRCPICGGTKKCFRPLAGPGST 64
Query: 122 R 122
R
Sbjct: 65 R 65
>gi|223477129|ref|YP_002581523.1| Rubredoxin [Thermococcus sp. AM4]
gi|214032355|gb|EEB73185.1| Rubredoxin [Thermococcus sp. AM4]
Length = 53
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E + F+ LP+++ CP+CGAPK +F
Sbjct: 6 CLICGYIYDEDEGDPEDGIEPGTRFEDLPEDWVCPLCGAPKDQF 49
>gi|48374208|gb|AAT41909.1| putative rubrerythrin [Fremyella diplosiphon Fd33]
Length = 251
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRP 115
+ICR C IY+ F+ +PD++ CP+CGA K+ F+P
Sbjct: 197 WICRQCSMIYDPVAGDPDSGIAPGTAFEDIPDDWRCPICGATKKTFKP 244
>gi|451946274|ref|YP_007466869.1| rubredoxin [Desulfocapsa sulfexigens DSM 10523]
gi|451905622|gb|AGF77216.1| rubredoxin [Desulfocapsa sulfexigens DSM 10523]
Length = 69
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 13/53 (24%)
Query: 76 KQAYICR--DCGYIYN------ERK-----PFDQLPDNYFCPVCGAPKRRFRP 115
++ Y C+ DCGY+Y+ RK FD LP+++ CP CGA K+ FRP
Sbjct: 5 EEMYQCQTVDCGYVYDPARGDKRRKISPGTSFDDLPEDWHCPSCGAGKKMFRP 57
>gi|443320498|ref|ZP_21049594.1| rubredoxin [Gloeocapsa sp. PCC 73106]
gi|442789780|gb|ELR99417.1| rubredoxin [Gloeocapsa sp. PCC 73106]
Length = 115
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 20/72 (27%)
Query: 53 LSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNY 101
+S Q+ +A AP Y CR CGYIY +K PF +LP +
Sbjct: 1 MSERSQEHTMAEQAPA---------NYECRSCGYIYEPQKGDGKSNTAPGTPFSELPKTW 51
Query: 102 FCPVCGAPKRRF 113
CPVCG + +F
Sbjct: 52 RCPVCGVGQAQF 63
>gi|78185751|ref|YP_378185.1| rubrerythrin [Synechococcus sp. CC9902]
gi|78170045|gb|ABB27142.1| rubrerythrin [Synechococcus sp. CC9902]
Length = 243
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ ++ PF+ +PD++ C +CGA K F PY A + A
Sbjct: 187 WICKVCSMIYDPKEGDPDSGIEPGTPFEAIPDDWCCTICGARKASFVPYREAELKTA 243
>gi|390961997|ref|YP_006425831.1| rubredoxin [Thermococcus sp. CL1]
gi|390520305|gb|AFL96037.1| rubredoxin [Thermococcus sp. CL1]
Length = 53
Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E + F+ LP+ + CP+CGAPK +F
Sbjct: 6 CIVCGYIYDEEEGDEDAGIAPGTRFEDLPEEWICPLCGAPKDQF 49
>gi|310829868|ref|YP_003962225.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308741602|gb|ADO39262.1| hypothetical protein ELI_4322 [Eubacterium limosum KIST612]
Length = 54
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y C C Y+Y+ + PF+ LPD +FCP CG K F+P
Sbjct: 2 QKYECEICEYVYDPEEGDPENGVAPGTPFENLPDGWFCPTCGVDKDAFKP 51
>gi|392954606|ref|ZP_10320157.1| Rubredoxin-type Fe(Cys)4 protein [Hydrocarboniphaga effusa AP103]
gi|391857263|gb|EIT67794.1| Rubredoxin-type Fe(Cys)4 protein [Hydrocarboniphaga effusa AP103]
Length = 69
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 74 ASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
A + +IC CG+IY++ F+ LPD++ CP CG+PK F Y
Sbjct: 14 AQMKRWICVICGFIYDDAVGMPEHGIAAGTRFEDLPDDWICPECGSPKSAFEIY 67
>gi|291518618|emb|CBK73839.1| Rubredoxin [Butyrivibrio fibrisolvens 16/4]
Length = 54
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGYIY+E F+ LPD++ CPVC K F+P
Sbjct: 3 YRCDVCGYIYDEDLGEPDWDIEPGTKFEDLPDDFVCPVCIVEKEHFKP 50
>gi|169350512|ref|ZP_02867450.1| hypothetical protein CLOSPI_01280 [Clostridium spiroforme DSM 1552]
gi|169292832|gb|EDS74965.1| rubredoxin [Clostridium spiroforme DSM 1552]
Length = 597
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
K+ ++C+ CGYIY D LPD+Y CP+C F P
Sbjct: 559 KKGFVCKICGYIYEG----DTLPDDYICPLCKHGAIDFEP 594
>gi|451947118|ref|YP_007467713.1| rubredoxin [Desulfocapsa sulfexigens DSM 10523]
gi|451906466|gb|AGF78060.1| rubredoxin [Desulfocapsa sulfexigens DSM 10523]
Length = 138
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 16/78 (20%)
Query: 52 LLSPPHQQQLLASAAP-----KFSMRVASKQAYICRDCGYIYN-----------ERKPFD 95
L P ASAAP + + + Y C CGYIY+ FD
Sbjct: 58 LAGPGSVHAENASAAPAKTETEIKGTASDMKKYRCDVCGYIYDPDVGDDAAGIPAGTSFD 117
Query: 96 QLPDNYFCPVCGAPKRRF 113
LPD+Y CPVCGA K F
Sbjct: 118 DLPDDYECPVCGAGKDEF 135
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 13/53 (24%)
Query: 76 KQAYICR--DCGYIYN----ERKP-------FDQLPDNYFCPVCGAPKRRFRP 115
++ Y C+ +CGYIY+ +RK F LP+ + CPVCGA + F+P
Sbjct: 5 EEMYQCQMVNCGYIYDPDKGDRKSKIKKGTQFKDLPEGWRCPVCGATVKAFKP 57
>gi|410668657|ref|YP_006921028.1| rubredoxin [Thermacetogenium phaeum DSM 12270]
gi|409106404|gb|AFV12529.1| putative rubredoxin [Thermacetogenium phaeum DSM 12270]
Length = 223
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 17/92 (18%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
YIC CG++Y+E K ++ LP+++ CP+CGA K F +G +D
Sbjct: 4 YICSVCGFVYDEAKGIPDAGIAAGTRWEDLPEDWVCPLCGATKSEFE------KQGESDM 57
Query: 128 AVRKARKEQIQRDEAIGKALPIAIAVAAVALA 159
+K I+ + + P+ ++ LA
Sbjct: 58 TPKKEPISVIESPVDMKEMSPLEVSALCTNLA 89
>gi|336436101|ref|ZP_08615814.1| hypothetical protein HMPREF0988_01399 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008141|gb|EGN38160.1| hypothetical protein HMPREF0988_01399 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 200
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Query: 74 ASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
A K +IC+ CGY+Y ++LP++Y CP+C P F
Sbjct: 161 AEKTGWICKICGYVYEG----EELPEDYICPICKHPASDFE 197
>gi|304314367|ref|YP_003849514.1| rubredoxin [Methanothermobacter marburgensis str. Marburg]
gi|302587826|gb|ADL58201.1| rubredoxin [Methanothermobacter marburgensis str. Marburg]
Length = 53
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y CR CGYIY+ K PF+ LP+ + CP CGA K+ F+P
Sbjct: 4 YKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMFKP 51
>gi|150403225|ref|YP_001330519.1| rubredoxin-type Fe(Cys)4 protein [Methanococcus maripaludis C7]
gi|150034255|gb|ABR66368.1| Rubredoxin-type Fe(Cys)4 protein [Methanococcus maripaludis C7]
Length = 44
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 81 CRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
C CGY Y+E K F +LPD + CP+CGA K F
Sbjct: 6 CTVCGYEYDEEKEGKKFSELPDTWTCPLCGAKKSAF 41
>gi|134046398|ref|YP_001097883.1| rubredoxin-type Fe(Cys)4 protein [Methanococcus maripaludis C5]
gi|132664023|gb|ABO35669.1| Rubredoxin-type Fe(Cys)4 protein [Methanococcus maripaludis C5]
Length = 45
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 81 CRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
C CGY Y+E K F +LPD + CP+CGA K F
Sbjct: 6 CTICGYEYDEEKEGKKFSELPDTWTCPMCGAKKSAF 41
>gi|88812507|ref|ZP_01127756.1| probable rubredoxin protein [Nitrococcus mobilis Nb-231]
gi|88790293|gb|EAR21411.1| probable rubredoxin protein [Nitrococcus mobilis Nb-231]
Length = 60
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFR 114
+AY+C CG+IY E K +D +P+++ CP CGA K F
Sbjct: 8 KAYMCVICGWIYEEEKGLPEAGIEPGTHWDDIPEDFVCPECGATKEDFE 56
>gi|125974649|ref|YP_001038559.1| rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum ATCC
27405]
gi|256004158|ref|ZP_05429142.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum DSM
2360]
gi|281419594|ref|ZP_06250603.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum JW20]
gi|385780089|ref|YP_005689254.1| rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum DSM
1313]
gi|419721437|ref|ZP_14248601.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum AD2]
gi|419726785|ref|ZP_14253805.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum YS]
gi|125714874|gb|ABN53366.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum ATCC
27405]
gi|255991906|gb|EEU02004.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum DSM
2360]
gi|281406753|gb|EFB37022.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum JW20]
gi|316941769|gb|ADU75803.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum DSM
1313]
gi|380769750|gb|EIC03650.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum YS]
gi|380782607|gb|EIC12241.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium thermocellum AD2]
Length = 52
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ K F+ +PD++ CP+CG K F
Sbjct: 2 EKYVCTACGYIYDPEKGDPDGGIAPGTAFEDIPDDWVCPICGVGKDMF 49
>gi|374298278|ref|YP_005048469.1| rubredoxin [Clostridium clariflavum DSM 19732]
gi|359827772|gb|AEV70545.1| rubredoxin [Clostridium clariflavum DSM 19732]
Length = 52
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ + PF+ +PD++ CPVCG K F
Sbjct: 2 EKYVCTVCGYIYDPAEGDPDGGIAPGTPFEDIPDDWVCPVCGVGKDMF 49
>gi|257066958|ref|YP_003153214.1| rubredoxin-type Fe(Cys)4 protein [Anaerococcus prevotii DSM 20548]
gi|256798838|gb|ACV29493.1| Rubredoxin-type Fe(Cys)4 protein [Anaerococcus prevotii DSM 20548]
Length = 52
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ + F+QLP+++ CPVCG K F
Sbjct: 3 YVCTACGYIYDPAEGDVDNGIEAGTEFEQLPEDWVCPVCGVGKDMF 48
>gi|224125572|ref|XP_002319619.1| predicted protein [Populus trichocarpa]
gi|222857995|gb|EEE95542.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CGY Y+E FD+LPD++ CP CGA K F
Sbjct: 96 VLNTGIYECRSCGYKYDEAVGDPSYPLPPGFQFDKLPDDWRCPTCGAAKSFFE 148
>gi|424665466|ref|ZP_18102502.1| rubredoxin [Bacteroides fragilis HMW 616]
gi|404574710|gb|EKA79458.1| rubredoxin [Bacteroides fragilis HMW 616]
Length = 53
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
YIC C YIY+ F+ +PD++ CP+CG K F PY
Sbjct: 3 YICTVCDYIYDPEIGDPESGVEPGTQFEDIPDDWVCPLCGVGKEDFEPY 51
>gi|322419583|ref|YP_004198806.1| rubredoxin-type Fe(Cys)4 protein [Geobacter sp. M18]
gi|320125970|gb|ADW13530.1| Rubredoxin-type Fe(Cys)4 protein [Geobacter sp. M18]
Length = 52
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y C CGYIY+ F+ +PD++ CPVCG K F P
Sbjct: 2 QKYRCTVCGYIYDPEIGDIDSGVAPGTAFEDIPDDWVCPVCGVDKGMFEP 51
>gi|392412569|ref|YP_006449176.1| rubredoxin [Desulfomonile tiedjei DSM 6799]
gi|390625705|gb|AFM26912.1| rubredoxin [Desulfomonile tiedjei DSM 6799]
Length = 64
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 13/54 (24%)
Query: 74 ASKQAYICR--DCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
K Y C+ +CGYIYN K F+ LPD++ CP+CGA K+ F+
Sbjct: 3 GEKTVYQCQTPNCGYIYNPEKGDRKGKIAKGTAFEDLPDDWKCPICGASKKAFK 56
>gi|428203289|ref|YP_007081878.1| rubredoxin [Pleurocapsa sp. PCC 7327]
gi|427980721|gb|AFY78321.1| rubredoxin [Pleurocapsa sp. PCC 7327]
Length = 52
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ YIC CGY Y+ PF++LP+++ CPVCGA K F
Sbjct: 2 RKYICSVCGYEYDPEVGEPDNGIEPGTPFEELPEDWVCPVCGATKEEF 49
>gi|15896033|ref|NP_349382.1| rubredoxin [Clostridium acetobutylicum ATCC 824]
gi|337737987|ref|YP_004637434.1| rubredoxin [Clostridium acetobutylicum DSM 1731]
gi|384459498|ref|YP_005671918.1| Rubredoxin [Clostridium acetobutylicum EA 2018]
gi|20140212|sp|Q9AL94.1|RUBR_CLOAB RecName: Full=Rubredoxin; Short=Rd
gi|15025816|gb|AAK80722.1|AE007775_9 Rubredoxin [Clostridium acetobutylicum ATCC 824]
gi|12963891|gb|AAK07690.1| rubredoxin [Clostridium acetobutylicum ATCC 824]
gi|325510187|gb|ADZ21823.1| Rubredoxin [Clostridium acetobutylicum EA 2018]
gi|336292025|gb|AEI33159.1| rubredoxin [Clostridium acetobutylicum DSM 1731]
Length = 54
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIY-----------NERKPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGYIY N F+ +PD++ CP+CG K +F P
Sbjct: 2 KKYVCVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFEP 51
>gi|351729032|ref|ZP_08946723.1| rubredoxin-type Fe(Cys)4 protein [Acidovorax radicis N35]
gi|365087765|ref|ZP_09327651.1| rubredoxin-type Fe(Cys)4 protein [Acidovorax sp. NO-1]
gi|363417388|gb|EHL24468.1| rubredoxin-type Fe(Cys)4 protein [Acidovorax sp. NO-1]
Length = 57
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ + ++C CG+IY+E + P+DQ+P N+ CP CGA K F
Sbjct: 1 MIDSKTWMCLICGWIYDEAEGSPEHGIAPNTPWDQVPMNWTCPECGARKEDFE 53
>gi|91203144|emb|CAJ72783.1| strongly similar to rubredoxin [Candidatus Kuenenia
stuttgartiensis]
Length = 52
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY+ + F LPD++ CP+CGAPK +F
Sbjct: 2 ERYKCIICGYIYDPKFGDPDHGINPGTSFQNLPDDWVCPLCGAPKEQF 49
>gi|294102367|ref|YP_003554225.1| rubredoxin-type Fe(Cys)4 protein [Aminobacterium colombiense DSM
12261]
gi|293617347|gb|ADE57501.1| Rubredoxin-type Fe(Cys)4 protein [Aminobacterium colombiense DSM
12261]
Length = 53
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGYIY+ E P F+ LPD++ CPVC K F P
Sbjct: 2 QRYVCTVCGYIYDPAEGDPDNGIAPGTSFEDLPDDWVCPVCAVEKDMFEP 51
>gi|227824381|ref|ZP_03989213.1| rubredoxin [Acidaminococcus sp. D21]
gi|352683508|ref|YP_004895491.1| rubredoxin [Acidaminococcus intestini RyC-MR95]
gi|226904880|gb|EEH90798.1| rubredoxin [Acidaminococcus sp. D21]
gi|350278161|gb|AEQ21351.1| rubredoxin [Acidaminococcus intestini RyC-MR95]
Length = 52
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C+ CGY+Y+E F+ LPD++ CP+CG K +F
Sbjct: 2 KKYVCQVCGYVYDEAAGDPDRGIAPGTKFEDLPDDWTCPLCGVGKDQF 49
>gi|339500446|ref|YP_004698481.1| Rubredoxin-type Fe(Cys)4 protein [Spirochaeta caldaria DSM 7334]
gi|338834795|gb|AEJ19973.1| Rubredoxin-type Fe(Cys)4 protein [Spirochaeta caldaria DSM 7334]
Length = 53
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGYIY+ + PF+ LP ++ CP+CGA K F P
Sbjct: 2 KKYVCDVCGYIYDPAEGDKDGGIQPGTPFESLPADWVCPMCGASKDDFSP 51
>gi|62737982|pdb|1SPW|A Chain A, Solution Structure Of A Loop Truncated Mutant From D.
Gigas Rubredoxin, Nmr
Length = 39
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY Y+ F+ LPD++ CPVCGA K F
Sbjct: 4 YVCTVCGYEYD--PAFEDLPDDWACPVCGASKDAF 36
>gi|17228669|ref|NP_485217.1| rubrerythrin [Nostoc sp. PCC 7120]
gi|17130520|dbj|BAB73131.1| rubrerythrin [Nostoc sp. PCC 7120]
Length = 237
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 75 SKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
S + +ICR C IY+ PF+ +P+++ CP+CGA K+ F+
Sbjct: 179 STRKWICRQCSMIYDPVAGDPDSGIAPGTPFEDIPNDWQCPICGATKKTFK 229
>gi|56752446|ref|YP_173147.1| rubrerythrin [Synechococcus elongatus PCC 6301]
gi|81300458|ref|YP_400666.1| rubrerythrin [Synechococcus elongatus PCC 7942]
gi|56687405|dbj|BAD80627.1| rubrerythrin [Synechococcus elongatus PCC 6301]
gi|81169339|gb|ABB57679.1| rubrerythrin [Synechococcus elongatus PCC 7942]
Length = 238
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 12/56 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY-TPAV 120
Q +IC C IY+ + PF +P+++ CP+CG K+ F PY PA+
Sbjct: 181 QKWICLQCSVIYDPAEGDLDSGIAPGTPFAAIPEDWSCPICGVTKKSFVPYQEPAI 236
>gi|300866431|ref|ZP_07111125.1| rubredoxin-type Fe(Cys)4 protein [Oscillatoria sp. PCC 6506]
gi|300335573|emb|CBN56285.1| rubredoxin-type Fe(Cys)4 protein [Oscillatoria sp. PCC 6506]
Length = 52
Score = 43.1 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q YIC C Y+Y+ PF+ +P+++ CP+CGA K F P
Sbjct: 2 QKYICTICAYVYDPELGDPDGGIAPGTPFEDIPEDWVCPICGALKSDFEP 51
>gi|114319918|ref|YP_741601.1| rubredoxin-type Fe(Cys)4 protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226312|gb|ABI56111.1| Rubredoxin-type Fe(Cys)4 protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 469
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 11/43 (25%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPK 110
Y+CR CGYIY+E K F+ +PD++ CP CG K
Sbjct: 8 YLCRVCGYIYDEAKGDPDGSLPPGTRFEDIPDDWECPDCGMRK 50
>gi|139438017|ref|ZP_01771570.1| Hypothetical protein COLAER_00557 [Collinsella aerofaciens ATCC
25986]
gi|133776214|gb|EBA40034.1| rubredoxin [Collinsella aerofaciens ATCC 25986]
Length = 217
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQ 138
++C CGY+ E DQLP+++ CP CG P RF A + V A+ E +
Sbjct: 34 FVCPVCGYV--EEFDGDQLPEDFKCPQCGVPGSRFLKQEEGQLEWAAEHVVGVAKMEGVS 91
Query: 139 RD 140
D
Sbjct: 92 ED 93
>gi|312880312|ref|ZP_07740112.1| Rubredoxin-type Fe(Cys)4 protein [Aminomonas paucivorans DSM 12260]
gi|310783603|gb|EFQ24001.1| Rubredoxin-type Fe(Cys)4 protein [Aminomonas paucivorans DSM 12260]
Length = 53
Score = 43.1 bits (100), Expect = 0.044, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ PF+++PD++ CPVCG K F
Sbjct: 2 KKYVCTVCGYVYDPANGDPDSGIAPGTPFEEIPDDWVCPVCGVAKDMF 49
>gi|225451241|ref|XP_002276406.1| PREDICTED: rubredoxin-like [Vitis vinifera]
Length = 200
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYF 102
SPP + + + V + Y CR CGY Y+E FD+LPD++
Sbjct: 80 SPPQEPENFDKRRLEEKFAVLNTGIYECRSCGYKYDEAAGDPSYPIPPGLQFDKLPDDWR 139
Query: 103 CPVCGAPKRRFR 114
CP CGA + F
Sbjct: 140 CPTCGAARSFFE 151
>gi|325279910|ref|YP_004252452.1| Rubredoxin-type Fe(Cys)4 protein [Odoribacter splanchnicus DSM
20712]
gi|324311719|gb|ADY32272.1| Rubredoxin-type Fe(Cys)4 protein [Odoribacter splanchnicus DSM
20712]
Length = 54
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C Y+Y+ + F+ LPD++ CP+CG K F PY
Sbjct: 2 KKYICTVCDYVYDPVQGDPDAGIEPGTAFEDLPDDWVCPLCGVGKDEFEPY 52
>gi|304313815|ref|YP_003848962.1| hydroxylamine reductase-related protein [Methanothermobacter
marburgensis str. Marburg]
gi|302587274|gb|ADL57649.1| hydroxylamine reductase-related protein [Methanothermobacter
marburgensis str. Marburg]
Length = 491
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 20/71 (28%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
Y C+ C YIY+ PF +LP+++ CPVC K +F P RG
Sbjct: 3 YRCKVCDYIYDPEVGDPTSGIKPGTPFQELPEDWLCPVCNVGKDQFEP-----LRG---- 53
Query: 128 AVRKARKEQIQ 138
VR+ R E I
Sbjct: 54 EVRRVRPEDID 64
>gi|300855128|ref|YP_003780112.1| flavin reductase-like protein [Clostridium ljungdahlii DSM 13528]
gi|300435243|gb|ADK15010.1| putative flavin reductase-like protein with rubredoxin domain
[Clostridium ljungdahlii DSM 13528]
Length = 229
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFR 114
Y C CGYIY+ PF+ +PD++ CP+CG K F+
Sbjct: 180 YECTVCGYIYDPAVGDPGSGIPAGTPFENIPDDWTCPICGVTKDNFK 226
>gi|255542376|ref|XP_002512251.1| Rubredoxin, putative [Ricinus communis]
gi|223548212|gb|EEF49703.1| Rubredoxin, putative [Ricinus communis]
Length = 195
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CGY Y+E FD+LPD++ CP CGA K F
Sbjct: 94 VLNTGIYECRSCGYKYDEGVGDPTYPIPPGFQFDKLPDDWRCPTCGAAKSFFE 146
>gi|163310876|pdb|2PVX|A Chain A, Nmr And X-ray Analysis Of Structural Additivity In Metal
Binding Site-swapped Hybrids Of Rubredoxin
gi|163310877|pdb|2PVX|B Chain B, Nmr And X-ray Analysis Of Structural Additivity In Metal
Binding Site-swapped Hybrids Of Rubredoxin
gi|163310878|pdb|2PVX|C Chain C, Nmr And X-ray Analysis Of Structural Additivity In Metal
Binding Site-swapped Hybrids Of Rubredoxin
gi|163310879|pdb|2PVX|D Chain D, Nmr And X-ray Analysis Of Structural Additivity In Metal
Binding Site-swapped Hybrids Of Rubredoxin
gi|163310880|pdb|2PVX|E Chain E, Nmr And X-ray Analysis Of Structural Additivity In Metal
Binding Site-swapped Hybrids Of Rubredoxin
gi|163310881|pdb|2PVX|F Chain F, Nmr And X-ray Analysis Of Structural Additivity In Metal
Binding Site-swapped Hybrids Of Rubredoxin
gi|163310882|pdb|2PVX|G Chain G, Nmr And X-ray Analysis Of Structural Additivity In Metal
Binding Site-swapped Hybrids Of Rubredoxin
gi|163310883|pdb|2PVX|H Chain H, Nmr And X-ray Analysis Of Structural Additivity In Metal
Binding Site-swapped Hybrids Of Rubredoxin
Length = 54
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ ++C CGYIY+E F++LPD++ CP+CG K +F
Sbjct: 2 KKWVCTVCGYIYDEDAGDPDNGISPGTKFEELPDDWVCPLCGVGKDQF 49
>gi|326490283|dbj|BAJ84805.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 202
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 25/111 (22%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
V + + CR CGY+Y++ K PF ++PD++ CP CGA + F
Sbjct: 101 VLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF-------- 152
Query: 122 RGANDTAVRKARKEQIQRDEAIGKALPIA---IAVAAVALAGLYFYLNSAF 169
+ +V A Q Q+ G +L + + L G F+L+ F
Sbjct: 153 ---DSKSVEIAGFAQNQQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGYF 200
>gi|313149368|ref|ZP_07811561.1| rubredoxin [Bacteroides fragilis 3_1_12]
gi|423280810|ref|ZP_17259722.1| rubredoxin [Bacteroides fragilis HMW 610]
gi|313138135|gb|EFR55495.1| rubredoxin [Bacteroides fragilis 3_1_12]
gi|404583613|gb|EKA88289.1| rubredoxin [Bacteroides fragilis HMW 610]
Length = 53
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
YIC C YIY+ F+ +PD++ CP+CG K F PY
Sbjct: 3 YICTVCDYIYDPETGDPESGIEPGTQFEDIPDDWVCPLCGVGKEDFEPY 51
>gi|427730714|ref|YP_007076951.1| rubredoxin [Nostoc sp. PCC 7524]
gi|427366633|gb|AFY49354.1| rubredoxin [Nostoc sp. PCC 7524]
Length = 111
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
Y CR CGY+Y K PF +LP N+ CPVC A K F PA T
Sbjct: 14 YECRACGYVYEPEKGDDKHDITPGTPFAELPINWRCPVCTAKKVAFTNIGPAGT 67
>gi|365873506|ref|ZP_09413039.1| rubredoxin [Thermanaerovibrio velox DSM 12556]
gi|363983593|gb|EHM09800.1| rubredoxin [Thermanaerovibrio velox DSM 12556]
Length = 53
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ PF+++PD++ CPVCG K F
Sbjct: 2 KKYVCTVCGYVYDPANGDPDSGIAPGTPFEEIPDDWVCPVCGVGKDMF 49
>gi|323343665|ref|ZP_08083892.1| high molecular weight rubredoxin [Prevotella oralis ATCC 33269]
gi|323095484|gb|EFZ38058.1| high molecular weight rubredoxin [Prevotella oralis ATCC 33269]
Length = 54
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGYIY+ F+ +PD++ CP+CG K F P
Sbjct: 2 KKYVCETCGYIYDPEVGDPDGGIAPGTAFEDIPDDWVCPLCGVGKDDFSP 51
>gi|269792735|ref|YP_003317639.1| rubredoxin-type Fe(Cys)4 protein [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100370|gb|ACZ19357.1| Rubredoxin-type Fe(Cys)4 protein [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 53
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ PF+++PD++ CPVCG K F
Sbjct: 2 KKYVCTVCGYVYDPANGDPDSGIAPGTPFEEIPDDWVCPVCGVGKDMF 49
>gi|354565123|ref|ZP_08984298.1| Rubredoxin-type Fe(Cys)4 protein [Fischerella sp. JSC-11]
gi|353549082|gb|EHC18524.1| Rubredoxin-type Fe(Cys)4 protein [Fischerella sp. JSC-11]
Length = 53
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGY+YN + F LP+++ CPVCGA K F P
Sbjct: 2 EKYVCTVCGYLYNPAEGDLDAGIPAGTAFADLPEDWVCPVCGAKKDDFEP 51
>gi|332654303|ref|ZP_08420047.1| flavodoxin [Ruminococcaceae bacterium D16]
gi|332517389|gb|EGJ46994.1| flavodoxin [Ruminococcaceae bacterium D16]
Length = 450
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 77 QAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
+ ++C+ CG++Y D LPD++ CP+C P F P
Sbjct: 414 KGFVCKICGFVYES----DTLPDDFICPICRRPASDFEP 448
>gi|220933081|ref|YP_002509989.1| rubredoxin-type Fe(Cys)4 protein [Halothermothrix orenii H 168]
gi|219994391|gb|ACL70994.1| Rubredoxin-type Fe(Cys)4 protein [Halothermothrix orenii H 168]
Length = 53
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y C+ CGYIY+ + PF+ LP+++ CPVCG K +F
Sbjct: 4 YECQVCGYIYDPDEGDPDNGIDPGTPFEDLPEDWVCPVCGVGKDQF 49
>gi|284047687|ref|YP_003398026.1| rubrerythrin [Acidaminococcus fermentans DSM 20731]
gi|283951908|gb|ADB46711.1| Rubrerythrin [Acidaminococcus fermentans DSM 20731]
Length = 182
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKAR 133
+ICR CGY+Y D+ P+ CP CGAPK +F V A++ V A+
Sbjct: 4 FICRVCGYVYE----GDEAPEK--CPQCGAPKDKFDELKEGVKEYADEHVVGVAK 52
>gi|282877268|ref|ZP_06286100.1| rubredoxin [Prevotella buccalis ATCC 35310]
gi|281300609|gb|EFA92946.1| rubredoxin [Prevotella buccalis ATCC 35310]
Length = 54
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGY+Y+ E P F+ LPD++ CP+CG K F P
Sbjct: 2 KKYVCETCGYVYDPAEGDPDGGIAPGTAFEDLPDDWVCPLCGVGKEDFTP 51
>gi|153806066|ref|ZP_01958734.1| hypothetical protein BACCAC_00317 [Bacteroides caccae ATCC 43185]
gi|237722873|ref|ZP_04553354.1| rubredoxin [Bacteroides sp. 2_2_4]
gi|262409156|ref|ZP_06085700.1| rubredoxin [Bacteroides sp. 2_1_22]
gi|293373427|ref|ZP_06619782.1| rubredoxin [Bacteroides ovatus SD CMC 3f]
gi|294647481|ref|ZP_06725064.1| rubredoxin [Bacteroides ovatus SD CC 2a]
gi|294806520|ref|ZP_06765360.1| rubredoxin [Bacteroides xylanisolvens SD CC 1b]
gi|298482248|ref|ZP_07000435.1| rubredoxin [Bacteroides sp. D22]
gi|336406349|ref|ZP_08587005.1| rubredoxin [Bacteroides sp. 1_1_30]
gi|336416942|ref|ZP_08597273.1| rubredoxin [Bacteroides ovatus 3_8_47FAA]
gi|345508810|ref|ZP_08788432.1| rubredoxin [Bacteroides sp. D1]
gi|383114032|ref|ZP_09934798.1| rubredoxin [Bacteroides sp. D2]
gi|423216338|ref|ZP_17202862.1| rubredoxin [Bacteroides xylanisolvens CL03T12C04]
gi|423221268|ref|ZP_17207761.1| rubredoxin [Bacteroides caccae CL03T12C61]
gi|423291679|ref|ZP_17270526.1| rubredoxin [Bacteroides ovatus CL02T12C04]
gi|423298326|ref|ZP_17276384.1| rubredoxin [Bacteroides ovatus CL03T12C18]
gi|149130743|gb|EDM21949.1| rubredoxin [Bacteroides caccae ATCC 43185]
gi|229446092|gb|EEO51883.1| rubredoxin [Bacteroides sp. D1]
gi|229447395|gb|EEO53186.1| rubredoxin [Bacteroides sp. 2_2_4]
gi|262352903|gb|EEZ01999.1| rubredoxin [Bacteroides sp. 2_1_22]
gi|292631565|gb|EFF50188.1| rubredoxin [Bacteroides ovatus SD CMC 3f]
gi|292637191|gb|EFF55626.1| rubredoxin [Bacteroides ovatus SD CC 2a]
gi|294446278|gb|EFG14905.1| rubredoxin [Bacteroides xylanisolvens SD CC 1b]
gi|295085279|emb|CBK66802.1| Rubredoxin [Bacteroides xylanisolvens XB1A]
gi|298271535|gb|EFI13109.1| rubredoxin [Bacteroides sp. D22]
gi|313697295|gb|EFS34130.1| rubredoxin [Bacteroides sp. D2]
gi|335935011|gb|EGM96992.1| rubredoxin [Bacteroides sp. 1_1_30]
gi|335936986|gb|EGM98896.1| rubredoxin [Bacteroides ovatus 3_8_47FAA]
gi|392622138|gb|EIY16276.1| rubredoxin [Bacteroides caccae CL03T12C61]
gi|392662802|gb|EIY56358.1| rubredoxin [Bacteroides ovatus CL02T12C04]
gi|392663238|gb|EIY56789.1| rubredoxin [Bacteroides ovatus CL03T12C18]
gi|392690871|gb|EIY84124.1| rubredoxin [Bacteroides xylanisolvens CL03T12C04]
Length = 54
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C YIY+ + F+ +PD++ CP+CG K F PY
Sbjct: 2 KKYICTVCEYIYDPEQGDPESGIEPGTAFEDIPDDWTCPLCGVGKEDFEPY 52
>gi|116753439|ref|YP_842557.1| rubredoxin-type Fe(Cys)4 protein [Methanosaeta thermophila PT]
gi|116664890|gb|ABK13917.1| Rubredoxin-type Fe(Cys)4 protein [Methanosaeta thermophila PT]
Length = 52
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIY+ K PF++LPD++ CP CGA K F
Sbjct: 4 YKCTICGYIYDPEKGDPDNGVEPGTPFEKLPDDWVCPECGAAKDAF 49
>gi|302875349|ref|YP_003843982.1| rubredoxin-type Fe(Cys)4 protein [Clostridium cellulovorans 743B]
gi|307688929|ref|ZP_07631375.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium cellulovorans 743B]
gi|302578206|gb|ADL52218.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium cellulovorans 743B]
Length = 53
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+YN E P FD +PD + CP+CG K F
Sbjct: 2 KKYVCLVCGYVYNPEEGDPDNGVQPGTDFDDIPDTWVCPLCGVGKDDF 49
>gi|374316221|ref|YP_005062649.1| rubredoxin [Sphaerochaeta pleomorpha str. Grapes]
gi|359351865|gb|AEV29639.1| rubredoxin [Sphaerochaeta pleomorpha str. Grapes]
Length = 53
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ + F+ LP+++ CP+CGAPK F P
Sbjct: 2 KEYECDLCGYIYDPKVGDPDNGIKAGTAFEDLPEDWVCPLCGAPKSDFSP 51
>gi|253580370|ref|ZP_04857636.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251848463|gb|EES76427.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 596
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
K+ ++C+ CGYIY D+LP++Y CP+C F P
Sbjct: 559 KKGFVCKVCGYIYEG----DELPEDYICPLCKHGAVDFEP 594
>gi|258404277|ref|YP_003197019.1| rubredoxin-type Fe(Cys)4 protein [Desulfohalobium retbaense DSM
5692]
gi|257796504|gb|ACV67441.1| Rubredoxin-type Fe(Cys)4 protein [Desulfohalobium retbaense DSM
5692]
Length = 53
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Q ++C CGY+Y+ ++ F+ LP+++ CPVCGA K F
Sbjct: 2 QRWVCTVCGYVYDPQEGDPDNDIAAGTAFEDLPEDWVCPVCGAGKEDF 49
>gi|11498486|ref|NP_069714.1| rubredoxin [Archaeoglobus fulgidus DSM 4304]
gi|2649724|gb|AAB90363.1| rubredoxin (rd-1) [Archaeoglobus fulgidus DSM 4304]
Length = 53
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y C CGY+Y+E + ++ LPD++ CPVCGA K +F
Sbjct: 4 YQCTICGYVYDEAEGDPESDVSPGTKWEDLPDDWVCPVCGATKDQF 49
>gi|428780226|ref|YP_007172012.1| rubredoxin [Dactylococcopsis salina PCC 8305]
gi|428694505|gb|AFZ50655.1| rubredoxin [Dactylococcopsis salina PCC 8305]
Length = 115
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 20/72 (27%)
Query: 53 LSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNY 101
++ P +++ LA AAP Y CR CGY+Y K F+ LP +
Sbjct: 1 MTEPAEEKTLAEAAPS---------RYECRSCGYVYEPNKGDSGQNIPAGTAFEDLPSQW 51
Query: 102 FCPVCGAPKRRF 113
CPVCGA + F
Sbjct: 52 RCPVCGARRTVF 63
>gi|154150105|ref|YP_001403723.1| rubredoxin-type Fe(Cys)4 protein [Methanoregula boonei 6A8]
gi|153998657|gb|ABS55080.1| Rubredoxin-type Fe(Cys)4 protein [Methanoregula boonei 6A8]
Length = 195
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 68 KFSMRVASKQAYICRDCGYIYNER--------KP---FDQLPDNYFCPVC 106
K+ + YIC CGY+Y+E+ KP FD LPD+Y CPVC
Sbjct: 122 KWGFDEWAPTRYICSICGYVYDEKRGEPHRGIKPGTKFDDLPDDYKCPVC 171
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 11/40 (27%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCG 107
Y CR CGY+Y+ + PF+ LP++Y CPVCG
Sbjct: 74 YRCRLCGYVYSPLRGEPHNGIPAGTPFEDLPEDYVCPVCG 113
>gi|393782930|ref|ZP_10371110.1| rubredoxin [Bacteroides salyersiae CL02T12C01]
gi|392671288|gb|EIY64762.1| rubredoxin [Bacteroides salyersiae CL02T12C01]
Length = 53
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
YIC C YIY+ F+ +PD++ CP+CG K F PY
Sbjct: 3 YICTVCEYIYDPELGDPESGIEPGTAFEDIPDDWVCPLCGVGKEDFEPY 51
>gi|381152979|ref|ZP_09864848.1| rubredoxin [Methylomicrobium album BG8]
gi|380884951|gb|EIC30828.1| rubredoxin [Methylomicrobium album BG8]
Length = 56
Score = 42.7 bits (99), Expect = 0.053, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C +C +IY+E K ++ +PD++ CP+CGAPK F+P
Sbjct: 5 KKYHCMECEHIYDEAKGDPDSGIAPGTRWEDIPDDWECPICGAPKSFFKP 54
>gi|86605553|ref|YP_474316.1| rubredoxin [Synechococcus sp. JA-3-3Ab]
gi|86554095|gb|ABC99053.1| rubredoxin [Synechococcus sp. JA-3-3Ab]
Length = 101
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
Q Y CR CGY+Y K PF++LP ++ CPVC A KR F+
Sbjct: 2 QRYECRSCGYVYEPAKGDQLNRIPAGVPFEELPADWRCPVCRAGKRLFQ 50
>gi|402829765|ref|ZP_10878638.1| rubredoxin [Slackia sp. CM382]
gi|402283432|gb|EJU31946.1| rubredoxin [Slackia sp. CM382]
Length = 233
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ C+ CGYI D+LPD++ CP+CG K F
Sbjct: 197 GWQCQVCGYIVE----IDELPDDFVCPICGVGKENF 228
>gi|425435204|ref|ZP_18815662.1| Rubredoxin [Microcystis aeruginosa PCC 9432]
gi|425449651|ref|ZP_18829487.1| Rubredoxin [Microcystis aeruginosa PCC 7941]
gi|425460835|ref|ZP_18840315.1| Rubredoxin [Microcystis aeruginosa PCC 9808]
gi|425470772|ref|ZP_18849632.1| Rubredoxin [Microcystis aeruginosa PCC 9701]
gi|440754324|ref|ZP_20933526.1| rubredoxin family protein [Microcystis aeruginosa TAIHU98]
gi|443669554|ref|ZP_21134762.1| rubredoxin family protein [Microcystis aeruginosa DIANCHI905]
gi|159026416|emb|CAO87925.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|389680280|emb|CCH91014.1| Rubredoxin [Microcystis aeruginosa PCC 9432]
gi|389763572|emb|CCI09924.1| Rubredoxin [Microcystis aeruginosa PCC 7941]
gi|389826443|emb|CCI23046.1| Rubredoxin [Microcystis aeruginosa PCC 9808]
gi|389883468|emb|CCI36140.1| Rubredoxin [Microcystis aeruginosa PCC 9701]
gi|440174530|gb|ELP53899.1| rubredoxin family protein [Microcystis aeruginosa TAIHU98]
gi|443330159|gb|ELS44899.1| rubredoxin family protein [Microcystis aeruginosa DIANCHI905]
Length = 115
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 67 PKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
P+ ++ + + CR CGY+Y+ K PF++LP+ + CPVCG + +F
Sbjct: 6 PELTLADQAPANHECRSCGYVYDPSKGDSKTNTPAGTPFEELPETWRCPVCGVRRSQF-- 63
Query: 116 YTPAVTRGANDTAVRKARKEQIQRDEAIGKALPI---AIAVAAVALAGLYF 163
+ GA D +E + + + P + A+AL ++F
Sbjct: 64 ----INIGAKDAP--SGFQENLSYGFGVNRLTPAQKNILIFGALALGFVFF 108
>gi|269216610|ref|ZP_06160464.1| rubredoxin [Slackia exigua ATCC 700122]
gi|269130139|gb|EEZ61221.1| rubredoxin [Slackia exigua ATCC 700122]
Length = 233
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ C+ CGYI D+LPD++ CP+CG K F
Sbjct: 197 GWQCQVCGYIVE----IDELPDDFVCPICGVGKENF 228
>gi|298529559|ref|ZP_07016962.1| Rubredoxin-type Fe(Cys)4 protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510995|gb|EFI34898.1| Rubredoxin-type Fe(Cys)4 protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 53
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q ++C CGY+Y+ F+ +PD++ CPVCGA K F P
Sbjct: 2 QKWVCTICGYVYDSAAGDPDNGVAAGTKFEDVPDSWVCPVCGAAKDDFAP 51
>gi|432332137|ref|YP_007250280.1| rubredoxin [Methanoregula formicicum SMSP]
gi|432138846|gb|AGB03773.1| rubredoxin [Methanoregula formicicum SMSP]
Length = 58
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ K PF++LP ++ CP CGA K +F
Sbjct: 6 EMYVCLVCGYIYDPEKGDEKSGIPPGVPFEKLPADWVCPECGAGKDQF 53
>gi|119490518|ref|ZP_01622960.1| rubredoxin [Lyngbya sp. PCC 8106]
gi|119453846|gb|EAW35002.1| rubredoxin [Lyngbya sp. PCC 8106]
Length = 53
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYT 117
+ Y+C CGYIY+ + F+ +PD++ CP CG K F P +
Sbjct: 2 KKYVCNTCGYIYDPEEGDPDSDIAPGTAFEDIPDDWVCPTCGVSKSDFEPMS 53
>gi|379013338|ref|YP_005271150.1| rubredoxin [Acetobacterium woodii DSM 1030]
gi|375304127|gb|AFA50261.1| rubredoxin [Acetobacterium woodii DSM 1030]
Length = 53
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIY-----------NERKPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+Y N F+ +P+++ CP+CG K F P
Sbjct: 2 QKYVCDICGYVYDPEVGDPDGGINPGTAFEDIPEDWVCPLCGVGKEDFSP 51
>gi|350270685|ref|YP_004881993.1| putative flavoprotein [Oscillibacter valericigenes Sjm18-20]
gi|348595527|dbj|BAK99487.1| putative flavoprotein [Oscillibacter valericigenes Sjm18-20]
Length = 450
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 77 QAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
+ ++C+ CG+IY D LPD++ CP+C P F P
Sbjct: 414 RGFVCKVCGFIYEG----DTLPDDFVCPICHRPASSFEP 448
>gi|333995479|ref|YP_004528092.1| rubredoxin [Treponema azotonutricium ZAS-9]
gi|333737308|gb|AEF83257.1| rubredoxin [Treponema azotonutricium ZAS-9]
Length = 53
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Q Y+C CGY+Y+ F+QLP ++ CP+CGA K F
Sbjct: 2 QKYVCDLCGYVYDPANGDDNGGIKAGTAFEQLPSDWVCPLCGASKDNF 49
>gi|229106147|ref|ZP_04236701.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus cereus Rock3-28]
gi|228677265|gb|EEL31588.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus cereus Rock3-28]
Length = 54
Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIY+ F+ LP+++ CPVCG +F P
Sbjct: 2 KKYICLPCGYIYDPEIGDLDEDIEPGTSFEDLPEDWVCPVCGEDTEQFAP 51
>gi|407940626|ref|YP_006856267.1| rubredoxin-type Fe(Cys)4 protein [Acidovorax sp. KKS102]
gi|407898420|gb|AFU47629.1| rubredoxin-type Fe(Cys)4 protein [Acidovorax sp. KKS102]
Length = 57
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ ++C CG+IY+E + P+DQ+P N+ CP CGA K F
Sbjct: 5 KTWMCLICGWIYDEAQGSPEHGIAPGTPWDQVPMNWTCPECGARKEDFE 53
>gi|116071943|ref|ZP_01469211.1| rubrerythrin [Synechococcus sp. BL107]
gi|116065566|gb|EAU71324.1| rubrerythrin [Synechococcus sp. BL107]
Length = 237
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ + PF+ +PD++ C +CGA K F PY A + A
Sbjct: 181 WICKVCSMIYDPKDGDPDSGIEPGTPFEAIPDDWCCTICGARKASFVPYREAELKTA 237
>gi|21673927|ref|NP_661992.1| rubredoxin [Chlorobium tepidum TLS]
gi|22654090|sp|P58993.1|RUBR2_CHLTE RecName: Full=Rubredoxin-2; Short=Rd 2
gi|21647068|gb|AAM72334.1| rubredoxin [Chlorobium tepidum TLS]
Length = 52
Score = 42.7 bits (99), Expect = 0.057, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ + C CGYIYN F+ LPD++ CPVCGA K F
Sbjct: 2 EQWKCNICGYIYNPETGDPEGDIPAGTSFESLPDSWMCPVCGAGKEEF 49
>gi|310780589|ref|YP_003968920.1| Rubredoxin-type Fe(Cys)4 protein [Ilyobacter polytropus DSM 2926]
gi|309749912|gb|ADO84572.1| Rubredoxin-type Fe(Cys)4 protein [Ilyobacter polytropus DSM 2926]
Length = 129
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 72 RVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ + ++C CGY+Y+ F+ LPD + CP+CGAPK F
Sbjct: 74 KAPESEKWLCNPCGYVYDPNIGDTDHDIPIGTEFNDLPDTWVCPLCGAPKEDF 126
>gi|260587432|ref|ZP_05853345.1| rubredoxin [Blautia hansenii DSM 20583]
gi|260542299|gb|EEX22868.1| rubredoxin [Blautia hansenii DSM 20583]
Length = 54
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+Y N +P F+ LP+++ CP+CG K F P
Sbjct: 2 QKYVCEPCGYVYDPELGDPDNGVEPGTAFEDLPEDWVCPICGLGKEEFVP 51
>gi|388492872|gb|AFK34502.1| unknown [Lotus japonicus]
gi|388505656|gb|AFK40894.1| unknown [Lotus japonicus]
Length = 186
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGA 108
V + Y CR CGY Y+E PF++LPD++ CP CGA
Sbjct: 85 VLNTGIYECRSCGYKYDESVGDPSYPIPPGFPFEKLPDDWRCPTCGA 131
>gi|212224016|ref|YP_002307252.1| rubredoxin [Thermococcus onnurineus NA1]
gi|212008973|gb|ACJ16355.1| rubredoxin [Thermococcus onnurineus NA1]
Length = 53
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E + F+ LP+++ CP+CGAPK F
Sbjct: 6 CIVCGYIYDEDEGDPDTGIEPGTKFEDLPEDWVCPLCGAPKDMF 49
>gi|425447381|ref|ZP_18827370.1| Rubredoxin [Microcystis aeruginosa PCC 9443]
gi|389732060|emb|CCI03940.1| Rubredoxin [Microcystis aeruginosa PCC 9443]
Length = 115
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 22/111 (19%)
Query: 67 PKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
P+ ++ + + CR CGY+Y+ K PF++LP+ + CPVCG + +F
Sbjct: 6 PELTLADQAPANHECRSCGYVYDPSKGDGKTNTPAGTPFEELPETWRCPVCGVRRSQF-- 63
Query: 116 YTPAVTRGANDTAVRKARKEQIQRDEAIGKALPIA---IAVAAVALAGLYF 163
+ GA D +E + + + P + A+AL ++F
Sbjct: 64 ----INIGAKDAP--SGFQENLSYGFGVNRLTPAQKNFLIFGALALGFVFF 108
>gi|315917432|ref|ZP_07913672.1| rubredoxin [Fusobacterium gonidiaformans ATCC 25563]
gi|317058949|ref|ZP_07923434.1| rubredoxin [Fusobacterium sp. 3_1_5R]
gi|313684625|gb|EFS21460.1| rubredoxin [Fusobacterium sp. 3_1_5R]
gi|313691307|gb|EFS28142.1| rubredoxin [Fusobacterium gonidiaformans ATCC 25563]
Length = 56
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFR 114
Y+C CGY+Y+ F+ LPD++ CP CG K FR
Sbjct: 4 YVCEVCGYVYDSTLGDVDHGIPAGTKFEDLPDDWVCPPCGVSKDHFR 50
>gi|299143228|ref|ZP_07036308.1| rubredoxin [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517713|gb|EFI41452.1| rubredoxin [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 60
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
Q Y C CGYIY+ F+ LP+++ CP+CGA K F PY
Sbjct: 8 QKYECTLCGYIYDPELGDEEGEIEAGTAFEDLPEDWECPLCGAGKEDFEPY 58
>gi|389577034|ref|ZP_10167062.1| rubrerythrin [Eubacterium cellulosolvens 6]
gi|389312519|gb|EIM57452.1| rubrerythrin [Eubacterium cellulosolvens 6]
Length = 191
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 79 YICRDCGYIYNER---KPFDQLPDNYFCPVCGAPKRRFR 114
+ C CG+IY+E F+ LPD++ CP C PK +F
Sbjct: 4 WKCTVCGHIYDEELEGVKFEDLPDDWKCPTCKQPKSKFE 42
>gi|308270477|emb|CBX27089.1| Rubredoxin [uncultured Desulfobacterium sp.]
Length = 52
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
Y+C+ CGY+Y N KP F+ LPD++ CP+CGA K F
Sbjct: 4 YVCKVCGYVYDPAAGDPDNGVKPGTKFEDLPDSWQCPICGASKSDF 49
>gi|193212653|ref|YP_001998606.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobaculum parvum NCIB 8327]
gi|193086130|gb|ACF11406.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobaculum parvum NCIB 8327]
Length = 52
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ + C CGYIY+ K F+ LP+N+ CP+CGA K F
Sbjct: 2 EQWKCVICGYIYSPEKGDPEGDIQAGTSFEDLPENWICPICGAGKEEF 49
>gi|284161747|ref|YP_003400370.1| rubredoxin-type Fe(Cys)4 protein [Archaeoglobus profundus DSM 5631]
gi|284011744|gb|ADB57697.1| Rubredoxin-type Fe(Cys)4 protein [Archaeoglobus profundus DSM 5631]
Length = 58
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 11/55 (20%)
Query: 74 ASKQAYICRDCGYIYNER--KPFDQLP---------DNYFCPVCGAPKRRFRPYT 117
A + C+ CGY+Y+E PF+ +P D++ CPVCG K +F P +
Sbjct: 3 AESMKWKCKCCGYVYDESVGDPFNDIPPETKFEDLLDDWVCPVCGCSKDKFVPLS 57
>gi|414873505|tpg|DAA52062.1| TPA: hypothetical protein ZEAMMB73_358341 [Zea mays]
Length = 288
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 58 QQQLLASAAPKFSMR-------VASKQAYICRDCGYIYNERK-----------PFDQLPD 99
QQ+ PK R V + + CR CGY Y++ PF QLPD
Sbjct: 165 QQEEDEDGGPKLDPRRFVEKFAVLNTGVHECRSCGYRYDQEAGDPSYPVPPGLPFAQLPD 224
Query: 100 NYFCPVCGAPKRRFR 114
++ CP CGA + F
Sbjct: 225 DWRCPTCGATQSFFE 239
>gi|333030852|ref|ZP_08458913.1| Rubredoxin-type Fe(Cys)4 protein [Bacteroides coprosuis DSM 18011]
gi|332741449|gb|EGJ71931.1| Rubredoxin-type Fe(Cys)4 protein [Bacteroides coprosuis DSM 18011]
Length = 54
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGY+Y N KP F+ LPD++ CP CG K F P
Sbjct: 2 KKYVCTVCGYVYDPAEGDPDNGIKPGTAFEDLPDDWVCPECGVGKEDFEP 51
>gi|296273952|ref|YP_003656583.1| rubredoxin-type Fe(Cys)4 protein [Arcobacter nitrofigilis DSM 7299]
gi|296098126|gb|ADG94076.1| Rubredoxin-type Fe(Cys)4 protein [Arcobacter nitrofigilis DSM 7299]
Length = 54
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
Q YIC+ C YIY+ F+ LP+++ CP CG K F PY
Sbjct: 2 QKYICKVCDYIYDPALGDEDSGIAAGTAFEVLPEDWECPDCGVSKEDFEPY 52
>gi|157364463|ref|YP_001471230.1| rubredoxin-type Fe(Cys)4 protein [Thermotoga lettingae TMO]
gi|157315067|gb|ABV34166.1| Rubredoxin-type Fe(Cys)4 protein [Thermotoga lettingae TMO]
Length = 54
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
Y C CGY+Y+ E P F+ LPD++ CPVCGA K F P
Sbjct: 4 YRCIICGYVYDPAEGDPDSDIPAGTSFEDLPDDWVCPVCGASKEDFEP 51
>gi|75908078|ref|YP_322374.1| rubredoxin-type Fe(Cys)4 protein [Anabaena variabilis ATCC 29413]
gi|13633949|sp|Q9XBL8.1|RUBR_ANAVT RecName: Full=Rubredoxin; Short=Rd
gi|5139340|emb|CAB45645.1| rubredoxin [Anabaena variabilis]
gi|75701803|gb|ABA21479.1| Rubredoxin-type Fe(Cys)4 protein [Anabaena variabilis ATCC 29413]
Length = 111
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 22/99 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
+ CR CGY+Y K PF +LP N+ CPVC A K F PA T
Sbjct: 14 FECRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAFSNIGPAGT------ 67
Query: 128 AVRKARKEQIQRDEAIGKALPI---AIAVAAVALAGLYF 163
+E + + K P + A+AL L+F
Sbjct: 68 --ASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFF 104
>gi|428312197|ref|YP_007123174.1| rubredoxin [Microcoleus sp. PCC 7113]
gi|428253809|gb|AFZ19768.1| rubredoxin [Microcoleus sp. PCC 7113]
Length = 54
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPY 116
+ Y+C CGY+Y+ E P F+ +P+++ CPVCGA K F Y
Sbjct: 2 KKYLCTVCGYVYDPAEGDPDSDIAPGTAFEDIPEDWVCPVCGATKEDFEEY 52
>gi|325856860|ref|ZP_08172358.1| rubredoxin [Prevotella denticola CRIS 18C-A]
gi|327314527|ref|YP_004329964.1| rubredoxin [Prevotella denticola F0289]
gi|325483233|gb|EGC86210.1| rubredoxin [Prevotella denticola CRIS 18C-A]
gi|326944588|gb|AEA20473.1| rubredoxin [Prevotella denticola F0289]
Length = 54
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ F+ +PD++ CP+CG K F+P
Sbjct: 2 KKYECETCGYIYDPEVGDPDGGIEPGTAFEDIPDDWVCPLCGVGKDDFKP 51
>gi|427420670|ref|ZP_18910853.1| rubredoxin [Leptolyngbya sp. PCC 7375]
gi|425756547|gb|EKU97401.1| rubredoxin [Leptolyngbya sp. PCC 7375]
Length = 133
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPA 119
Y CR CGY+Y K PFD+LP + CPVCGA + F PA
Sbjct: 36 YECRPCGYVYEPVKGDGKADIPPGVPFDELPIKWRCPVCGARPKMFANIGPA 87
>gi|83718788|ref|YP_441491.1| rubredoxin-like protein [Burkholderia thailandensis E264]
gi|83652613|gb|ABC36676.1| rubredoxin-related protein [Burkholderia thailandensis E264]
Length = 105
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 18/81 (22%)
Query: 51 LLLSPPHQQQLLASAAP------KFSM-RVASKQAYICRDCGYIYNERKP---------- 93
L LSPP + A P +F+M V ++++C CG++YNE +
Sbjct: 20 LRLSPPDAPRSRDPATPNAMVLQEFNMSEVVEYKSWVCLICGWVYNEAEGLPDEGIAAGT 79
Query: 94 -FDQLPDNYFCPVCGAPKRRF 113
F +PDN+ CP+C K F
Sbjct: 80 RFADIPDNWRCPLCDVGKEDF 100
>gi|357418900|ref|YP_004931892.1| rubredoxin-type Fe(Cys)4 protein [Thermovirga lienii DSM 17291]
gi|355396366|gb|AER65795.1| Rubredoxin-type Fe(Cys)4 protein [Thermovirga lienii DSM 17291]
Length = 52
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY-----------NERKPFDQLPDNYFCPVCGAPKRRF 113
Q Y+C CGY+Y N PF+ +P+ + CPVCG K F
Sbjct: 2 QKYVCSVCGYVYDPEAGDPDNGVNPGTPFEDVPEEWVCPVCGVGKDMF 49
>gi|224542138|ref|ZP_03682677.1| hypothetical protein CATMIT_01313 [Catenibacterium mitsuokai DSM
15897]
gi|224524906|gb|EEF94011.1| rubredoxin [Catenibacterium mitsuokai DSM 15897]
Length = 38
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
++C+ CGY+Y D+LP++Y CPVCG F
Sbjct: 3 WVCKVCGYVYEG----DELPEDYVCPVCGVGPEEF 33
>gi|160903066|ref|YP_001568647.1| rubredoxin-type Fe(Cys)4 protein [Petrotoga mobilis SJ95]
gi|160360710|gb|ABX32324.1| Rubredoxin-type Fe(Cys)4 protein [Petrotoga mobilis SJ95]
Length = 54
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY N+ +P F+ LPD++ CPVCGA K F
Sbjct: 2 KKYRCMICGYIYDPEAGDPDNDIEPGTSFEDLPDDWTCPVCGAAKEDF 49
>gi|354553019|ref|ZP_08972326.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. ATCC 51472]
gi|353554849|gb|EHC24238.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. ATCC 51472]
Length = 115
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 22/97 (22%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAV 129
CR CGY+Y K PF +LPD + CPVCGA +F V+ GA T
Sbjct: 20 CRLCGYVYEPNKGDSKGNVPPGTPFSELPDGWKCPVCGAKPNQF------VSIGA--TNA 71
Query: 130 RKARKEQIQRDEAIGKALPIA---IAVAAVALAGLYF 163
+E + + P + +AL L+F
Sbjct: 72 PSGFQENLNYGFGVNNLTPNQKNLLIFGGLALGFLFF 108
>gi|5139323|emb|CAB45638.1| rubredoxin [Nostoc sp. PCC 7120]
Length = 111
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 22/99 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
+ CR CGY+Y K PF +LP N+ CPVC A K F PA T
Sbjct: 14 FECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAFTNIGPAGT------ 67
Query: 128 AVRKARKEQIQRDEAIGKALPI---AIAVAAVALAGLYF 163
+E + + K P + A+AL L+F
Sbjct: 68 --GSGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFF 104
>gi|357405316|ref|YP_004917240.1| rubredoxin [Methylomicrobium alcaliphilum 20Z]
gi|351717981|emb|CCE23646.1| Rubredoxin (Rd) [Methylomicrobium alcaliphilum 20Z]
Length = 55
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 11/54 (20%)
Query: 73 VASKQAYICRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRFRP 115
+A + Y C +CG+IY+E+ +P ++ +PD++ CP CGA K F P
Sbjct: 1 MADYKKYQCLECGHIYDEQLGDPDSGIEPGTRWEDIPDDWVCPECGAEKSAFEP 54
>gi|312143595|ref|YP_003995041.1| rubredoxin-type Fe(Cys)4 protein [Halanaerobium hydrogeniformans]
gi|311904246|gb|ADQ14687.1| Rubredoxin-type Fe(Cys)4 protein [Halanaerobium hydrogeniformans]
Length = 54
Score = 42.4 bits (98), Expect = 0.071, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPY 116
Q Y C C YIY+ E P F+ LPD++ CP CG K F PY
Sbjct: 2 QKYQCTVCMYIYDPEEGDPVGGIEAGTSFEDLPDDWVCPECGVGKDMFEPY 52
>gi|300814396|ref|ZP_07094667.1| rubredoxin [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511504|gb|EFK38733.1| rubredoxin [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 54
Score = 42.4 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ +P F+ LP+++ CP+CGA K F P
Sbjct: 2 KKYECTMCGYIYDPEVGDEDGGIEPGVAFENLPEDWVCPLCGAEKSDFEP 51
>gi|315230118|ref|YP_004070554.1| rubredoxin [Thermococcus barophilus MP]
gi|315183146|gb|ADT83331.1| rubredoxin [Thermococcus barophilus MP]
Length = 53
Score = 42.4 bits (98), Expect = 0.073, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E + F++LPD++ CP+CGA K F
Sbjct: 6 CLVCGYIYDEEEGDPDAGIAPGTKFEELPDDWVCPLCGAGKDMF 49
>gi|319789387|ref|YP_004151020.1| Rubredoxin-type Fe(Cys)4 protein [Thermovibrio ammonificans HB-1]
gi|317113889|gb|ADU96379.1| Rubredoxin-type Fe(Cys)4 protein [Thermovibrio ammonificans HB-1]
Length = 58
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 12/56 (21%)
Query: 71 MRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
M V K + C CGYIYN + PF+ LP ++ CPVCGA K +F P
Sbjct: 1 MEVRHK-LWRCTVCGYIYNVDEGDPENNIPPGTPFEALPVDWVCPVCGATKDKFEP 55
>gi|313888601|ref|ZP_07822266.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845330|gb|EFR32726.1| rubredoxin [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 53
Score = 42.4 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ F+ LP+++ CP+CGA K F P
Sbjct: 2 KKYECTLCGYIYDPEVGDEDNGVEAGTAFENLPEDWVCPLCGAEKSDFEP 51
>gi|374387207|ref|ZP_09644694.1| rubredoxin [Odoribacter laneus YIT 12061]
gi|373222602|gb|EHP44972.1| rubredoxin [Odoribacter laneus YIT 12061]
Length = 54
Score = 42.4 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC C YIY+ K F+ LPD++ CP+CG K F P
Sbjct: 2 KKYICTVCEYIYDPAKGDPDSGIEPGTAFEDLPDDWVCPLCGVGKEDFEP 51
>gi|134107|sp|P09947.1|RUBR_CHLLT RecName: Full=Rubredoxin; Short=Rd
Length = 53
Score = 42.4 bits (98), Expect = 0.074, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+Y+ + +P F+ LP+++ CPVCG K F P
Sbjct: 2 QKYVCSVCGYVYDPADGEPDDPIDPGTGFEDLPEDWVCPVCGVDKDLFEP 51
>gi|17231335|ref|NP_487883.1| rubredoxin [Nostoc sp. PCC 7120]
gi|20141811|sp|Q9WWN1.2|RUBR_ANASP RecName: Full=Rubredoxin; Short=Rd
gi|17132977|dbj|BAB75542.1| rubredoxin [Nostoc sp. PCC 7120]
Length = 111
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 22/99 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
+ CR CGY+Y K PF +LP N+ CPVC A K F PA T
Sbjct: 14 FECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAFTNIGPAGT------ 67
Query: 128 AVRKARKEQIQRDEAIGKALPI---AIAVAAVALAGLYF 163
+E + + K P + A+AL L+F
Sbjct: 68 --ASGFRENLGYGLGVNKLTPAQKNILIFGALALGFLFF 104
>gi|406979409|gb|EKE01202.1| Rubredoxin [uncultured bacterium]
Length = 54
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ E KP F LP+N+ CP+CG K F
Sbjct: 2 EKYVCNVCGYIYDPAAGDPDAEIKPGTSFKDLPENWVCPICGVGKEDF 49
>gi|376006359|ref|ZP_09783640.1| rubredoxin (modular protein) [Arthrospira sp. PCC 8005]
gi|375325250|emb|CCE19393.1| rubredoxin (modular protein) [Arthrospira sp. PCC 8005]
Length = 196
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 72 RVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V S Y C CGY+Y K F+ LP + CPVCGAP+ +FR
Sbjct: 92 EVKSPDRYECNACGYVYEPSKGSSTGNIPPGTEFEDLPARWRCPVCGAPRSQFR 145
>gi|239618497|ref|YP_002941819.1| Rubredoxin-type Fe(Cys)4 protein [Kosmotoga olearia TBF 19.5.1]
gi|239507328|gb|ACR80815.1| Rubredoxin-type Fe(Cys)4 protein [Kosmotoga olearia TBF 19.5.1]
Length = 53
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ PF+++P+++ CP+CGA K F P
Sbjct: 2 KKYRCLICGYIYDPETGDPDNGVEPGTPFEEIPEDWVCPLCGAGKDDFEP 51
>gi|397632970|gb|EJK70775.1| hypothetical protein THAOC_07837, partial [Thalassiosira oceanica]
Length = 145
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 79 YICRDCGYIYNERKP----FDQLPDNYFCPVCGAPKRRF 113
++C+DCGYIYN + F++ + CP C P+RR+
Sbjct: 66 WVCKDCGYIYNRAECANMYFEEQGAGFRCPQCSGPRRRY 104
>gi|395646306|ref|ZP_10434166.1| Rubredoxin-type Fe(Cys)4 protein [Methanofollis liminatans DSM
4140]
gi|395443046|gb|EJG07803.1| Rubredoxin-type Fe(Cys)4 protein [Methanofollis liminatans DSM
4140]
Length = 53
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIY+ K FD LPD++ CPVCGA K F
Sbjct: 4 YQCMVCGYIYDPEKGDPDAGIAPGTAFDDLPDDWSCPVCGAAKSNF 49
>gi|332159245|ref|YP_004424524.1| rubredoxin [Pyrococcus sp. NA2]
gi|331034708|gb|AEC52520.1| rubredoxin [Pyrococcus sp. NA2]
Length = 53
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+E + F+ LP+++ CP+CGAPK F
Sbjct: 6 CTICGYIYDEDEGDPDSGIPPGTKFEDLPEDWVCPLCGAPKDMF 49
>gi|330506351|ref|YP_004382779.1| Rubredoxin-type Fe(Cys)4 protein [Methanosaeta concilii GP6]
gi|328927159|gb|AEB66961.1| Rubredoxin-type Fe(Cys)4 protein [Methanosaeta concilii GP6]
Length = 105
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 14/74 (18%)
Query: 55 PPHQQQLLASAAPKFSMR---VASKQAYICRDCGYIYNER-----------KPFDQLPDN 100
P + L SA + S + V + Y C CGYIY+ PF++LPD+
Sbjct: 29 PSKVSRYLESAKKRISRKRIVVFMAKKYKCTLCGYIYDPEIGDPDSGIAPNTPFEELPDS 88
Query: 101 YFCPVCGAPKRRFR 114
+ CP CGA K F
Sbjct: 89 WTCPQCGASKSDFE 102
>gi|189501366|ref|YP_001960836.1| Glutamate synthase (NADPH) [Chlorobium phaeobacteroides BS1]
gi|189496807|gb|ACE05355.1| Glutamate synthase (NADPH) [Chlorobium phaeobacteroides BS1]
Length = 529
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 81 CRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
C C + Y+E K P+ L D++ CPVCG+PK F +P +T
Sbjct: 6 CSLCSHSYDESKASTPWMDLADDWVCPVCGSPKSAFTKVSPQIT 49
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 15/76 (19%)
Query: 41 KSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKP---FDQL 97
KS+F+ S + PP Q+ + +MR +Y C C ++Y+E K +++L
Sbjct: 38 KSAFTKVSPQITAEPPAIQE-------EPAMR-----SYECGLCSHVYDEAKEGILWEEL 85
Query: 98 PDNYFCPVCGAPKRRF 113
D++ CPVCG+ K F
Sbjct: 86 ADDWSCPVCGSGKEVF 101
>gi|119357372|ref|YP_912016.1| glutamate synthase (NADPH) GltB2 subunit [Chlorobium
phaeobacteroides DSM 266]
gi|119354721|gb|ABL65592.1| glutamate synthase (NADPH) GltB2 subunit [Chlorobium
phaeobacteroides DSM 266]
Length = 529
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 81 CRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRFRP 115
C C YIY+E K +D L +++ CPVCG+PK F P
Sbjct: 6 CGLCSYIYDENKESVAWDALANDWICPVCGSPKSSFVP 43
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 55 PPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKP---FDQLPDNYFCPVCGAPKR 111
P +QQ P+ + S Y C C Y Y+E K + LP+ + CPVCG+ K
Sbjct: 43 PLKEQQ---PETPEAESKSVSTNIYECALCSYAYDESKEGVLWQDLPEEWKCPVCGSGKE 99
Query: 112 RFR 114
FR
Sbjct: 100 SFR 102
>gi|386002062|ref|YP_005920361.1| rubredoxin-type Fe(Cys)4 protein [Methanosaeta harundinacea 6Ac]
gi|357210118|gb|AET64738.1| Rubredoxin-type Fe(Cys)4 protein [Methanosaeta harundinacea 6Ac]
Length = 53
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIY+ K F+ LPD++ CPVCGA K F
Sbjct: 5 YTCTVCGYIYDPEKGDPDSGVTPGTAFEDLPDDWTCPVCGATKEVF 50
>gi|282882642|ref|ZP_06291252.1| rubredoxin [Peptoniphilus lacrimalis 315-B]
gi|281297455|gb|EFA89941.1| rubredoxin [Peptoniphilus lacrimalis 315-B]
Length = 54
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ +P F+ LP+++ CP+CGA K F P
Sbjct: 2 KKYECTMCGYIYDPEVGDEDGGIEPGVAFEDLPEDWVCPLCGAEKSDFEP 51
>gi|238927172|ref|ZP_04658932.1| rubredoxin family Fe(Cys)4 protein [Selenomonas flueggei ATCC
43531]
gi|238884954|gb|EEQ48592.1| rubredoxin family Fe(Cys)4 protein [Selenomonas flueggei ATCC
43531]
Length = 53
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ ++C CG++Y+E K FD LP+++ CP+CG K F
Sbjct: 2 KTWVCTVCGWVYDEAKGDADYDLAPGVAFDDLPEDFVCPLCGVDKSMF 49
>gi|172036224|ref|YP_001802725.1| rubredoxin [Cyanothece sp. ATCC 51142]
gi|171697678|gb|ACB50659.1| rubredoxin [Cyanothece sp. ATCC 51142]
Length = 121
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 22/97 (22%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAV 129
CR CGY+Y K PF +LPD + CPVCGA +F V+ GA T
Sbjct: 26 CRLCGYVYEPNKGDSKGNVPPGTPFSELPDGWKCPVCGAKPNQF------VSIGA--TNA 77
Query: 130 RKARKEQIQRDEAIGKALPIA---IAVAAVALAGLYF 163
+E + + P + +AL L+F
Sbjct: 78 PSGFQENLNYGFGVNNLTPNQKNLLIFGGLALGFLFF 114
>gi|423251925|ref|ZP_17232933.1| rubredoxin [Bacteroides fragilis CL03T00C08]
gi|423252760|ref|ZP_17233691.1| rubredoxin [Bacteroides fragilis CL03T12C07]
gi|423259943|ref|ZP_17240866.1| rubredoxin [Bacteroides fragilis CL07T00C01]
gi|423267598|ref|ZP_17246579.1| rubredoxin [Bacteroides fragilis CL07T12C05]
gi|387775588|gb|EIK37694.1| rubredoxin [Bacteroides fragilis CL07T00C01]
gi|392648801|gb|EIY42488.1| rubredoxin [Bacteroides fragilis CL03T00C08]
gi|392659523|gb|EIY53142.1| rubredoxin [Bacteroides fragilis CL03T12C07]
gi|392696441|gb|EIY89635.1| rubredoxin [Bacteroides fragilis CL07T12C05]
Length = 53
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
YIC C +IY+ F+ +PD++ CP+CG K F PY
Sbjct: 3 YICTVCDFIYDPEIGDPEGGIEPGTQFEDIPDDWVCPLCGVGKEDFEPY 51
>gi|229187966|ref|ZP_04315063.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus cereus BGSC 6E1]
gi|228595502|gb|EEK53225.1| Rubredoxin-type Fe(Cys)4 protein [Bacillus cereus BGSC 6E1]
Length = 54
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIY+ + F++LP+++ CPVCG F P
Sbjct: 2 KKYICLPCGYIYDPKIGDPDENIEPGTSFEELPEDWVCPVCGEDTDHFAP 51
>gi|333986834|ref|YP_004519441.1| acetolactate synthase [Methanobacterium sp. SWAN-1]
gi|333824978|gb|AEG17640.1| Acetolactate synthase [Methanobacterium sp. SWAN-1]
Length = 590
Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 79 YICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
Y C C +IY+E FD+LPD++ CPVC +PK F
Sbjct: 4 YRCTVCNHIYDEDVEGVKFDELPDDWRCPVCNSPKSFF 41
>gi|225182020|ref|ZP_03735452.1| Rubredoxin-type Fe(Cys)4 protein [Dethiobacter alkaliphilus AHT 1]
gi|225167305|gb|EEG76124.1| Rubredoxin-type Fe(Cys)4 protein [Dethiobacter alkaliphilus AHT 1]
Length = 52
Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
+ ++C CGY+YN E P FD LPD++ CP CG K F
Sbjct: 2 EKWVCSVCGYVYNPEEGDPDNGVSPGTSFDDLPDDWVCPECGVGKDMF 49
>gi|53715630|ref|YP_101622.1| rubredoxin [Bacteroides fragilis YCH46]
gi|336411548|ref|ZP_08592012.1| rubredoxin [Bacteroides sp. 2_1_56FAA]
gi|375360405|ref|YP_005113177.1| putative rubredoxin [Bacteroides fragilis 638R]
gi|383119659|ref|ZP_09940397.1| rubredoxin [Bacteroides sp. 3_2_5]
gi|423272051|ref|ZP_17251020.1| rubredoxin [Bacteroides fragilis CL05T00C42]
gi|423275947|ref|ZP_17254890.1| rubredoxin [Bacteroides fragilis CL05T12C13]
gi|423282877|ref|ZP_17261762.1| rubredoxin [Bacteroides fragilis HMW 615]
gi|52218495|dbj|BAD51088.1| rubredoxin [Bacteroides fragilis YCH46]
gi|301165086|emb|CBW24654.1| putative rubredoxin [Bacteroides fragilis 638R]
gi|335941344|gb|EGN03201.1| rubredoxin [Bacteroides sp. 2_1_56FAA]
gi|382973066|gb|EES85204.2| rubredoxin [Bacteroides sp. 3_2_5]
gi|392695738|gb|EIY88944.1| rubredoxin [Bacteroides fragilis CL05T00C42]
gi|392700100|gb|EIY93267.1| rubredoxin [Bacteroides fragilis CL05T12C13]
gi|404581486|gb|EKA86184.1| rubredoxin [Bacteroides fragilis HMW 615]
Length = 53
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
YIC C +IY+ F+ +PD++ CP+CG K F PY
Sbjct: 3 YICTVCDFIYDPEIGDPEGGIEPGTQFEDIPDDWVCPLCGVGKEDFEPY 51
>gi|374630413|ref|ZP_09702798.1| Rubredoxin-type Fe(Cys)4 protein [Methanoplanus limicola DSM 2279]
gi|373908526|gb|EHQ36630.1| Rubredoxin-type Fe(Cys)4 protein [Methanoplanus limicola DSM 2279]
Length = 53
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRF 113
CR CGY+YN KP F+ +P+++ CP CGA K +F
Sbjct: 6 CRVCGYVYNPETGDEKNGIKPGTAFEDIPEDWVCPKCGASKSKF 49
>gi|118444318|ref|YP_877252.1| rubredoxin [Clostridium novyi NT]
gi|118134774|gb|ABK61818.1| Rubredoxin [Clostridium novyi NT]
Length = 53
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
Q YIC CGYIY N P FD +P+++ CP+CG K +F
Sbjct: 2 QKYICDVCGYIYDPAVGDPDNGVAPGTSFDDIPEDWLCPLCGVGKDQF 49
>gi|73670397|ref|YP_306412.1| rubredoxin [Methanosarcina barkeri str. Fusaro]
gi|72397559|gb|AAZ71832.1| rubredoxin [Methanosarcina barkeri str. Fusaro]
Length = 53
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
Q Y C +CGY+YN + PF LP ++ CP CGAPK +F+
Sbjct: 3 QMYRCGNCGYLYNPDRGDSSQSIAPDTPFQCLPKSWKCPRCGAPKEKFK 51
>gi|363889830|ref|ZP_09317183.1| rubredoxin [Eubacteriaceae bacterium CM5]
gi|363891906|ref|ZP_09319080.1| rubredoxin [Eubacteriaceae bacterium CM2]
gi|363894229|ref|ZP_09321318.1| rubredoxin [Eubacteriaceae bacterium ACC19a]
gi|402838291|ref|ZP_10886800.1| rubredoxin [Eubacteriaceae bacterium OBRC8]
gi|361962823|gb|EHL15930.1| rubredoxin [Eubacteriaceae bacterium ACC19a]
gi|361964730|gb|EHL17741.1| rubredoxin [Eubacteriaceae bacterium CM2]
gi|361966282|gb|EHL19206.1| rubredoxin [Eubacteriaceae bacterium CM5]
gi|402273322|gb|EJU22524.1| rubredoxin [Eubacteriaceae bacterium OBRC8]
Length = 52
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Q Y+C CGY+Y+ F LPD++ CPVCG K F
Sbjct: 2 QKYVCDVCGYVYDPAVGDEENGIAPGTSFGDLPDDWVCPVCGVDKDSF 49
>gi|449015904|dbj|BAM79306.1| hypothetical protein CYME_CME080C [Cyanidioschyzon merolae strain
10D]
Length = 234
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 78 AYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
+++C DCG+ Y+ + P + P+ + CP CGA KRRF
Sbjct: 155 SWLCVDCGWEYSTKAFGMPLELQPETFRCPQCGARKRRF 193
>gi|182417121|ref|ZP_02948496.1| rubredoxin [Clostridium butyricum 5521]
gi|237668561|ref|ZP_04528545.1| rubredoxin [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182378963|gb|EDT76469.1| rubredoxin [Clostridium butyricum 5521]
gi|237656909|gb|EEP54465.1| rubredoxin [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 52
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGY+Y+ PF+ LPD + CP+C K F P
Sbjct: 2 KKYVCEVCGYVYDPELGDEDGGIDPGIPFEDLPDYWVCPICSFSKDNFSP 51
>gi|13399664|pdb|1C09|A Chain A, Rubredoxin V44a Cp
gi|13399665|pdb|1C09|B Chain B, Rubredoxin V44a Cp
gi|13399666|pdb|1C09|C Chain C, Rubredoxin V44a Cp
Length = 54
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIYN F +PD++ CP+CGA K +F
Sbjct: 2 KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGAGKDQF 49
>gi|374300112|ref|YP_005051751.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332553048|gb|EGJ50092.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 53
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIY-----------NERKPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y N F+ +P ++ CPVCGAPK F
Sbjct: 4 YVCNICGYVYDPADGDPDNGVNPGTKFEDVPADWVCPVCGAPKSEF 49
>gi|160883652|ref|ZP_02064655.1| hypothetical protein BACOVA_01624 [Bacteroides ovatus ATCC 8483]
gi|299147558|ref|ZP_07040622.1| ferric-chelate reductase / Rubredoxin [Bacteroides sp. 3_1_23]
gi|156111065|gb|EDO12810.1| rubredoxin [Bacteroides ovatus ATCC 8483]
gi|298514345|gb|EFI38230.1| ferric-chelate reductase / Rubredoxin [Bacteroides sp. 3_1_23]
Length = 89
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C YIY+ + F+ +PD++ CP+CG K F PY
Sbjct: 37 KKYICTVCEYIYDPEQGDPESGIEPGTAFEDIPDDWTCPLCGVGKEDFEPY 87
>gi|37683585|gb|AAQ98844.1| rubredoxin [Rhodococcus sp. NCIMB12038]
gi|110825899|gb|ABH01027.1| rubredoxin [Rhodococcus opacus]
Length = 80
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPA 119
+ +IC C ++Y+ + F +PD++ CPVCGA K+ FR P
Sbjct: 17 ELWICEVCEFVYDPKLGDPDGDISPGTAFQDIPDDWVCPVCGARKKEFRKIKPG 70
>gi|331268467|ref|YP_004394959.1| rubredoxin-type Fe(Cys)4 protein [Clostridium botulinum BKT015925]
gi|329125017|gb|AEB74962.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium botulinum BKT015925]
Length = 53
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRF 113
Q YIC CGYIY+ F+ +PDN+ CP+C K +F
Sbjct: 2 QKYICDVCGYIYDPLVGDPDNGIAAGTTFEDIPDNWLCPLCSVGKDQF 49
>gi|189465319|ref|ZP_03014104.1| hypothetical protein BACINT_01667 [Bacteroides intestinalis DSM
17393]
gi|189437593|gb|EDV06578.1| rubredoxin [Bacteroides intestinalis DSM 17393]
Length = 140
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 20/114 (17%)
Query: 21 LLAPTGNNAGLRRPAD-------RFALKSSFSAPS--LHLLLSPPHQQQLLASAAPKFSM 71
LL P+ N P +KSSF+ + ++L ++ + K ++
Sbjct: 24 LLLPSSNTYNSNTPTSTAIPIRISIVIKSSFTIKTKQIYLFQIKTGNKRAVFIVIYKENL 83
Query: 72 RVASKQAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFR 114
+ + YIC C Y+Y N +P F+ LP+++ CP+CG K F
Sbjct: 84 KNSFMDKYICTVCDYVYDPEMGDPENGIEPGTSFEDLPEDWVCPLCGVGKEEFE 137
>gi|37520423|ref|NP_923800.1| rubredoxin [Gloeobacter violaceus PCC 7421]
gi|35211417|dbj|BAC88795.1| rubredoxin [Gloeobacter violaceus PCC 7421]
Length = 111
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
Query: 79 YICRDCGYIYNERK---------PFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
Y CR CGYIY K PF++L ++ CP+C + RF+ P V
Sbjct: 14 YECRTCGYIYEPTKGDATVPAGTPFEELAADWRCPICSSATSRFKSIGPKV 64
>gi|223996257|ref|XP_002287802.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976918|gb|EED95245.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 149
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 79 YICRDCGYIYNERKP----FDQLPDNYFCPVCGAPKRRF 113
++C+DCGYIYN + F++ + CP C P+RR+
Sbjct: 70 WVCKDCGYIYNRAECAGMYFEEQGAGFRCPQCSGPRRRY 108
>gi|242277568|ref|YP_002989697.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio salexigens DSM
2638]
gi|242120462|gb|ACS78158.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio salexigens DSM
2638]
Length = 59
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 13/53 (24%)
Query: 76 KQAYICR--DCGYIYN----ERK-------PFDQLPDNYFCPVCGAPKRRFRP 115
K Y C+ +CGYIYN +RK F LP+++ CPVCGA K+ F+P
Sbjct: 5 KDMYQCQVSNCGYIYNPDKGDRKGKIAKGTAFADLPEDWKCPVCGASKKSFKP 57
>gi|395646720|ref|ZP_10434580.1| Rubredoxin-type Fe(Cys)4 protein [Methanofollis liminatans DSM
4140]
gi|395443460|gb|EJG08217.1| Rubredoxin-type Fe(Cys)4 protein [Methanofollis liminatans DSM
4140]
Length = 53
Score = 42.0 bits (97), Expect = 0.096, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIYN + PF++LP+ + CP CGA K+ F
Sbjct: 4 YKCTKCGYIYNPGSGDASQNIPPKTPFEKLPETWLCPRCGATKKVF 49
>gi|325969931|ref|YP_004246122.1| rubredoxin-type Fe(Cys)4 protein [Sphaerochaeta globus str. Buddy]
gi|324025169|gb|ADY11928.1| Rubredoxin-type Fe(Cys)4 protein [Sphaerochaeta globus str. Buddy]
Length = 53
Score = 42.0 bits (97), Expect = 0.096, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGY+Y N KP F+ LP+++ CP+CGAPK F P
Sbjct: 2 KEYECDLCGYVYDPTVGDPDNGIKPGTAFEDLPEDWVCPLCGAPKSDFSP 51
>gi|228470102|ref|ZP_04055011.1| rubredoxin [Porphyromonas uenonis 60-3]
gi|313886463|ref|ZP_07820179.1| rubredoxin [Porphyromonas asaccharolytica PR426713P-I]
gi|332300314|ref|YP_004442235.1| rubredoxin-type Fe(Cys)4 protein [Porphyromonas asaccharolytica DSM
20707]
gi|228308240|gb|EEK17095.1| rubredoxin [Porphyromonas uenonis 60-3]
gi|312924009|gb|EFR34802.1| rubredoxin [Porphyromonas asaccharolytica PR426713P-I]
gi|332177377|gb|AEE13067.1| Rubredoxin-type Fe(Cys)4 protein [Porphyromonas asaccharolytica DSM
20707]
Length = 54
Score = 42.0 bits (97), Expect = 0.097, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CG++Y+ + PF+ LPD++ CP+CG K +F P
Sbjct: 2 KKYVCDVCGHVYDPAEGDPDSGIAPGTPFEDLPDDWECPLCGVSKDQFSP 51
>gi|193885193|pdb|2QL0|A Chain A, Zinc-Substituted Rubredoxin From Desulfovibrio Vulgaris
Length = 52
Score = 42.0 bits (97), Expect = 0.097, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY Y N KP FD LP ++ CPVCGAPK F
Sbjct: 2 KKYVCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEF 49
>gi|451817554|ref|YP_007453755.1| rubredoxin Rdx [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451783533|gb|AGF54501.1| rubredoxin Rdx [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 52
Score = 42.0 bits (97), Expect = 0.098, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ YIC CGYIY+E F+ LP ++ CP+CG P F
Sbjct: 2 EKYICTVCGYIYDEAVGDPDNGVAPGTKFEDLPGDWVCPLCGVPTSDF 49
>gi|288932332|ref|YP_003436392.1| Rubredoxin-type Fe(Cys)4 protein [Ferroglobus placidus DSM 10642]
gi|288894580|gb|ADC66117.1| Rubredoxin-type Fe(Cys)4 protein [Ferroglobus placidus DSM 10642]
Length = 53
Score = 42.0 bits (97), Expect = 0.098, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y C+ CGY+Y+E + ++ LP+++ CPVCGA K F
Sbjct: 4 YQCKVCGYVYDENEGDPDNDIPPGTKWEDLPEDWVCPVCGASKEDF 49
>gi|253681753|ref|ZP_04862550.1| rubredoxin [Clostridium botulinum D str. 1873]
gi|416348949|ref|ZP_11680543.1| rubredoxin [Clostridium botulinum C str. Stockholm]
gi|253561465|gb|EES90917.1| rubredoxin [Clostridium botulinum D str. 1873]
gi|338196640|gb|EGO88825.1| rubredoxin [Clostridium botulinum C str. Stockholm]
Length = 53
Score = 42.0 bits (97), Expect = 0.098, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Q YIC CGYIY+ F+ +PDN+ CP+C K +F
Sbjct: 2 QKYICDVCGYIYDPSVGDPDNGVAAGTSFEDIPDNWVCPLCNVGKDQF 49
>gi|428201316|ref|YP_007079905.1| rubredoxin [Pleurocapsa sp. PCC 7327]
gi|427978748|gb|AFY76348.1| rubredoxin [Pleurocapsa sp. PCC 7327]
Length = 115
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 11/47 (23%)
Query: 78 AYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+Y CR CGY+Y K PF++LP ++ CPVCGA + F
Sbjct: 17 SYECRACGYVYEPDKGDSKSNTPAGTPFEELPVDWRCPVCGASRSAF 63
>gi|404403826|ref|ZP_10995410.1| manganese/iron superoxide dismutase [Alistipes sp. JC136]
Length = 241
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
Y C C Y+Y+ K PFD++PD++ CP+CG K F
Sbjct: 191 YKCTACDYVYDPAKGDPETGIAPGTPFDEIPDDWTCPICGLYKSEFE 237
>gi|375084519|ref|ZP_09731394.1| hypothetical protein HMPREF9454_00005 [Megamonas funiformis YIT
11815]
gi|374568057|gb|EHR39248.1| hypothetical protein HMPREF9454_00005 [Megamonas funiformis YIT
11815]
Length = 213
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 53 LSPPHQQQLLASAAPKFS------MRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVC 106
++ + +++ APK + ++ K+ + C+ CGYIY + P+++ CP+C
Sbjct: 146 MTYKYYHEVIKGKAPKNAPTYQAPEKITDKETWACQICGYIY--EGDLTKEPEDFVCPIC 203
Query: 107 GAPKRRFR 114
PK F+
Sbjct: 204 KQPKSMFK 211
>gi|160934195|ref|ZP_02081582.1| hypothetical protein CLOLEP_03066 [Clostridium leptum DSM 753]
gi|156866868|gb|EDO60240.1| rubredoxin [Clostridium leptum DSM 753]
Length = 596
Score = 41.6 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
K+ ++C+ CGYIY D LPD++ CP+C F P
Sbjct: 559 KKGFVCKICGYIYEG----DVLPDDFICPLCKHGAADFEP 594
>gi|327401037|ref|YP_004341876.1| rubredoxin-type Fe(Cys)4 protein [Archaeoglobus veneficus SNP6]
gi|327316545|gb|AEA47161.1| Rubredoxin-type Fe(Cys)4 protein [Archaeoglobus veneficus SNP6]
Length = 51
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 10/45 (22%)
Query: 79 YICRDCGYIYNERK----------PFDQLPDNYFCPVCGAPKRRF 113
Y C CGY+Y+E + ++ LP+N+ CPVCGA K F
Sbjct: 3 YQCTVCGYVYDEDEGDPESGIPPTKWEDLPENWTCPVCGADKSEF 47
>gi|255283733|ref|ZP_05348288.1| flavodoxin [Bryantella formatexigens DSM 14469]
gi|255265798|gb|EET59003.1| rubredoxin [Marvinbryantia formatexigens DSM 14469]
Length = 596
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
K+ ++C+ CGYIY D LPD++ CP+C F P
Sbjct: 559 KKGFVCKVCGYIYEG----DTLPDDFICPLCKHGVADFEP 594
>gi|325270983|ref|ZP_08137570.1| rubredoxin/rubredoxin reductase [Prevotella multiformis DSM 16608]
gi|324986780|gb|EGC18776.1| rubredoxin/rubredoxin reductase [Prevotella multiformis DSM 16608]
Length = 54
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ F+ LPD++ CP+CG K F+P
Sbjct: 2 KKYECETCGYIYDPEAGDPDSGIAPGTAFEDLPDDWVCPLCGVGKDDFKP 51
>gi|291533774|emb|CBL06887.1| Conserved protein/domain typically associated with flavoprotein
oxygenases, DIM6/NTAB family [Megamonas hypermegale
ART12/1]
Length = 213
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 53 LSPPHQQQLLASAAPKFS------MRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVC 106
++ + +++ APK + ++ K+ + C+ CGYIY + P+++ CP+C
Sbjct: 146 MTYKYYHEVIKGKAPKNAPTYQAPEKITDKETWACQICGYIY--EGDLTKEPEDFVCPIC 203
Query: 107 GAPKRRFR 114
PK F+
Sbjct: 204 KQPKSMFK 211
>gi|158335781|ref|YP_001516954.1| rubredoxin [Acaryochloris marina MBIC11017]
gi|158306022|gb|ABW27639.1| rubredoxin [Acaryochloris marina MBIC11017]
Length = 114
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 72 RVASKQAYICRDCGYIY-----NERKP------FDQLPDNYFCPVCGAPKRRF 113
V + CR CGYIY ++R+ FDQLPD++ CPVC P +F
Sbjct: 10 EVVPVDRFECRSCGYIYEPDEGDKRRKIPPGTLFDQLPDDWKCPVCRTPMEQF 62
>gi|380692531|ref|ZP_09857390.1| rubredoxin [Bacteroides faecis MAJ27]
Length = 54
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C YIY+ + F+ +PD++ CP+CG K F PY
Sbjct: 2 KKYICTVCEYIYDPAQGDPDSGIEPGTAFEDIPDDWTCPLCGVGKEDFEPY 52
>gi|357042305|ref|ZP_09104011.1| rubredoxin [Prevotella histicola F0411]
gi|355369764|gb|EHG17155.1| rubredoxin [Prevotella histicola F0411]
Length = 54
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ F+ +PD++ CP+CG K F+P
Sbjct: 2 KKYECETCGYIYDPEVGDPDSGIAPGTAFEDIPDDWVCPLCGVSKDDFKP 51
>gi|16329682|ref|NP_440410.1| rubredoxin [Synechocystis sp. PCC 6803]
gi|383321424|ref|YP_005382277.1| rubredoxin [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383324594|ref|YP_005385447.1| rubredoxin [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383490478|ref|YP_005408154.1| rubredoxin [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384435744|ref|YP_005650468.1| rubredoxin [Synechocystis sp. PCC 6803]
gi|451813842|ref|YP_007450294.1| rubredoxin [Synechocystis sp. PCC 6803]
gi|13633886|sp|P73068.1|RUBR_SYNY3 RecName: Full=Rubredoxin; Short=Rd
gi|1652166|dbj|BAA17090.1| rubredoxin [Synechocystis sp. PCC 6803]
gi|339272776|dbj|BAK49263.1| rubredoxin [Synechocystis sp. PCC 6803]
gi|359270743|dbj|BAL28262.1| rubredoxin [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359273914|dbj|BAL31432.1| rubredoxin [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277084|dbj|BAL34601.1| rubredoxin [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407957566|dbj|BAM50806.1| rubredoxin [Synechocystis sp. PCC 6803]
gi|451779811|gb|AGF50780.1| rubredoxin [Synechocystis sp. PCC 6803]
Length = 115
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIY----NERK-------PFDQLPDNYFCPVCGAPKRRF 113
CR CGY+Y ++K PF+ LP N+ CPVCGAP+ F
Sbjct: 20 CRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPRNYF 63
>gi|383788546|ref|YP_005473115.1| rubredoxin [Caldisericum exile AZM16c01]
gi|381364183|dbj|BAL81012.1| rubredoxin [Caldisericum exile AZM16c01]
Length = 52
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY+ PF+ LP+++ CPVCGA K +F
Sbjct: 2 KKYKCMVCGYIYDPTVGDDTQDIPPGTPFEDLPEDWTCPVCGATKDQF 49
>gi|291287768|ref|YP_003504584.1| rubredoxin-type Fe(Cys)4 protein [Denitrovibrio acetiphilus DSM
12809]
gi|290884928|gb|ADD68628.1| Rubredoxin-type Fe(Cys)4 protein [Denitrovibrio acetiphilus DSM
12809]
Length = 53
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
YIC CG+IY+ F +PD++ CP CG K F PY
Sbjct: 3 YICTVCGWIYDPELGDPDNGIDAGTAFKDIPDDWVCPECGVGKDGFEPY 51
>gi|29347949|ref|NP_811452.1| rubredoxin [Bacteroides thetaiotaomicron VPI-5482]
gi|298387811|ref|ZP_06997361.1| rubredoxin [Bacteroides sp. 1_1_14]
gi|383121628|ref|ZP_09942335.1| rubredoxin [Bacteroides sp. 1_1_6]
gi|29339851|gb|AAO77646.1| rubredoxin [Bacteroides thetaiotaomicron VPI-5482]
gi|251837955|gb|EES66044.1| rubredoxin [Bacteroides sp. 1_1_6]
gi|298259416|gb|EFI02290.1| rubredoxin [Bacteroides sp. 1_1_14]
Length = 54
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C YIY+ + F+ +PD++ CP+CG K F PY
Sbjct: 2 KKYICTVCEYIYDPAQGDPESGIEPGTAFEDIPDDWTCPLCGVGKEDFEPY 52
>gi|350545634|ref|ZP_08915104.1| Rubredoxin-NAD(+) reductase [Candidatus Burkholderia kirkii
UZHbot1]
gi|350526588|emb|CCD40082.1| Rubredoxin-NAD(+) reductase [Candidatus Burkholderia kirkii
UZHbot1]
Length = 60
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 72 RVASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
V ++++C CG+IYNE + FD +PD++ CP+C K F
Sbjct: 3 EVIEYKSWVCLICGWIYNEEEGLPEEGIAAGTRFDDIPDDWRCPLCDVGKADF 55
>gi|284047897|ref|YP_003398236.1| rubredoxin-type Fe(Cys)4 protein [Acidaminococcus fermentans DSM
20731]
gi|283952118|gb|ADB46921.1| Rubredoxin-type Fe(Cys)4 protein [Acidaminococcus fermentans DSM
20731]
Length = 53
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+E F+ LP+++ CP+CG K +F
Sbjct: 2 KKYVCDVCGYVYDEAAGDPEHNIAPGTKFEDLPEDWVCPICGVGKDQF 49
>gi|358451094|ref|ZP_09161530.1| rubredoxin-type Fe(Cys)4 protein, partial [Marinobacter
manganoxydans MnI7-9]
gi|357224699|gb|EHJ03228.1| rubredoxin-type Fe(Cys)4 protein, partial [Marinobacter
manganoxydans MnI7-9]
Length = 72
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 63 ASAAPKFSMRVASKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKR 111
+S +PK S + + + ++C CG+IY+E F+ +PD++ CP CGA K
Sbjct: 6 SSKSPKDSTQKDTYRKWVCITCGHIYDEALGDEAEGFPAGTRFEDIPDDWCCPDCGATKE 65
Query: 112 RFRPY 116
+ Y
Sbjct: 66 DYVLY 70
>gi|300726048|ref|ZP_07059506.1| putative rubredoxin [Prevotella bryantii B14]
gi|299776655|gb|EFI73207.1| putative rubredoxin [Prevotella bryantii B14]
Length = 314
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 5/50 (10%)
Query: 69 FSMRVASKQAYICRDCGYIYN----ERKPFDQLPDNYFCPVCGAPKRRFR 114
FS + S + ++C CGYIY+ + F+ LPD++ CP C PK +F
Sbjct: 263 FSKKETSDK-FVCSVCGYIYDPAEHDGVAFEDLPDDWKCPRCKQPKDKFN 311
>gi|308071374|ref|YP_003872979.1| Rubredoxin 3 (Rd 3) [Paenibacillus polymyxa E681]
gi|305860653|gb|ADM72441.1| Rubredoxin 3 (Rd 3) [Paenibacillus polymyxa E681]
Length = 56
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C+ CGYIY+ F++LP+++ CPVCG + F P
Sbjct: 2 KKYVCQPCGYIYDPAIGDPDEDVMPGTAFEELPEDWVCPVCGEDQSHFAP 51
>gi|427716997|ref|YP_007064991.1| rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 7507]
gi|427349433|gb|AFY32157.1| Rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 7507]
Length = 114
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPA 119
Y CR CGY+Y K PF +LP + CPVC A K+ F PA
Sbjct: 17 YECRSCGYVYEPEKGDDKYEIPSGTPFAELPLTWRCPVCSAKKQAFSNIGPA 68
>gi|449442899|ref|XP_004139218.1| PREDICTED: LOW QUALITY PROTEIN: rubredoxin-like [Cucumis sativus]
Length = 201
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CG+ ++E PF+QLP+++ CP CGA K F
Sbjct: 100 VLNTGIYECRSCGHKFDEAXGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFE 152
>gi|307354247|ref|YP_003895298.1| rubredoxin-type Fe(Cys)4 protein [Methanoplanus petrolearius DSM
11571]
gi|307157480|gb|ADN36860.1| Rubredoxin-type Fe(Cys)4 protein [Methanoplanus petrolearius DSM
11571]
Length = 54
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ + C+ CGY+YN F+ LPD + CP CGA K F
Sbjct: 2 KVWKCKKCGYVYNPEVGDHESGISKGTAFEDLPDTWVCPRCGAKKNMF 49
>gi|126658552|ref|ZP_01729699.1| rubredoxin [Cyanothece sp. CCY0110]
gi|126620139|gb|EAZ90861.1| rubredoxin [Cyanothece sp. CCY0110]
Length = 115
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
CR CGY+Y K PF +LPD + CPVCGA +F
Sbjct: 20 CRLCGYVYEPSKGDGKGNVPPGTPFSELPDGWKCPVCGAKPNQF 63
>gi|261856790|ref|YP_003264073.1| Rubredoxin-type Fe(Cys)4 protein [Halothiobacillus neapolitanus c2]
gi|261837259|gb|ACX97026.1| Rubredoxin-type Fe(Cys)4 protein [Halothiobacillus neapolitanus c2]
Length = 480
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
+IC CG+IY+E K F+ +P+++ CP+CG K F
Sbjct: 10 WICLICGWIYDEVKGDPDSGIAPGTRFEDIPEDWSCPLCGVTKADF 55
>gi|443313334|ref|ZP_21042946.1| rubredoxin [Synechocystis sp. PCC 7509]
gi|442776739|gb|ELR87020.1| rubredoxin [Synechocystis sp. PCC 7509]
Length = 111
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
Y CR CGY+Y K PF +LP ++ CPVCG +F P+ T
Sbjct: 14 YECRACGYVYEPDKGDSKHPIDPGTPFTELPSSWRCPVCGVRTSQFENIGPSGT 67
>gi|427709862|ref|YP_007052239.1| rubredoxin-type Fe(Cys)4 protein [Nostoc sp. PCC 7107]
gi|427362367|gb|AFY45089.1| Rubredoxin-type Fe(Cys)4 protein [Nostoc sp. PCC 7107]
Length = 111
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 22/99 (22%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
Y CR CGY+Y K F +LP N+ CPVC A K F P+ T
Sbjct: 14 YECRACGYVYEPEKGDDKHDIPSGTLFTELPINWRCPVCSAKKTAFANIGPSGT------ 67
Query: 128 AVRKARKEQIQRDEAIGKALPI---AIAVAAVALAGLYF 163
KE + + K P + A+ALA L+F
Sbjct: 68 --ASGFKENLGFGLGVNKLTPGQKNILIFGALALAFLFF 104
>gi|4586295|dbj|BAA76336.1| rubredoxin [Rhodococcus sp. CIR2]
gi|110825898|gb|ABH01026.1| rubredoxin [Rhodococcus opacus]
Length = 86
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPA 119
+ ++C C +Y+ R F +PD++ CPVCGA K+ FR +P
Sbjct: 17 ELWVCEVCEDVYDPRLGDPEGGISPGTAFQDIPDDWVCPVCGARKKEFRKLSPG 70
>gi|374298981|ref|YP_005050620.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332551917|gb|EGJ48961.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 107
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 11/43 (25%)
Query: 84 CGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
CGY+YN E P F +LPD++ CP CGA K+ F+P
Sbjct: 15 CGYVYNPDEGDPKRGIKAGTKFGELPDDWTCPFCGAEKKDFKP 57
>gi|440681580|ref|YP_007156375.1| Rubredoxin-type Fe(Cys)4 protein [Anabaena cylindrica PCC 7122]
gi|428678699|gb|AFZ57465.1| Rubredoxin-type Fe(Cys)4 protein [Anabaena cylindrica PCC 7122]
Length = 114
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
Y CR CGY+Y K F +LP N+ CPVC A K F PA T
Sbjct: 17 YECRSCGYVYEPEKGDDKNDITAGILFAELPTNWRCPVCNAKKVAFANIGPAGT 70
>gi|325263509|ref|ZP_08130243.1| rubredoxin [Clostridium sp. D5]
gi|324031218|gb|EGB92499.1| rubredoxin [Clostridium sp. D5]
Length = 53
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ E P F+ LPD++ CPVCG K F
Sbjct: 4 YVCEPCGYVYDPEEGDPDSGIEAGTAFEDLPDDWVCPVCGLGKDVF 49
>gi|126179258|ref|YP_001047223.1| rubredoxin-type Fe(Cys)4 protein [Methanoculleus marisnigri JR1]
gi|125862052|gb|ABN57241.1| Rubredoxin-type Fe(Cys)4 protein [Methanoculleus marisnigri JR1]
Length = 128
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 68 KFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCG 107
K+ + Y+C+ CGY+Y++++ F+ LP++Y CPVCG
Sbjct: 55 KWGFELWEPTKYVCKICGYVYDKKRGEPLRGYPKGTAFEDLPEDYVCPVCG 105
>gi|229828387|ref|ZP_04454456.1| hypothetical protein GCWU000342_00448 [Shuttleworthia satelles DSM
14600]
gi|229792981|gb|EEP29095.1| hypothetical protein GCWU000342_00448 [Shuttleworthia satelles DSM
14600]
Length = 53
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ F+ +PD++ CPVCGA K F
Sbjct: 4 YLCEPCGYIYDPEVGDPDGGIAPGTAFEDIPDDWVCPVCGASKDAF 49
>gi|339441103|ref|YP_004707108.1| rubredoxin [Clostridium sp. SY8519]
gi|338900504|dbj|BAK46006.1| rubredoxin [Clostridium sp. SY8519]
Length = 52
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGYIY+ F+ LPD++ CP+CGA K F+P
Sbjct: 3 YECEPCGYIYDPEVGDPDNGVAPGTAFEDLPDDWCCPICGAAKDDFKP 50
>gi|46581586|ref|YP_012394.1| rubredoxin [Desulfovibrio vulgaris str. Hildenborough]
gi|120601254|ref|YP_965654.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio vulgaris DP4]
gi|387154785|ref|YP_005703721.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio vulgaris RCH1]
gi|134114|sp|P00269.2|RUBR_DESVH RecName: Full=Rubredoxin; Short=Rd
gi|443567|pdb|8RXN|A Chain A, Refinement Of Rubredoxin From Desulfovibrio Vulgaris At
1.0 Angstroms With And Without Restraints
gi|157837159|pdb|7RXN|A Chain A, Structure Of Rubredoxin From Desulfovibrio Vulgaris At 1.5
A Resolution
gi|281500593|pdb|2KKD|A Chain A, Nmr Structure Of Ni Substitued Desulfovibrio Vulgaris
Rubredoxin
gi|145116|gb|AAA23381.1| rubredoxin [Desulfovibrio vulgaris str. Hildenborough]
gi|145120|gb|AAA21088.1| rubredoxin [Desulfovibrio vulgaris str. Hildenborough]
gi|758677|gb|AAA64798.1| rubredoxin [Desulfovibrio vulgaris str. Hildenborough]
gi|46451009|gb|AAS97654.1| rubredoxin [Desulfovibrio vulgaris str. Hildenborough]
gi|120561483|gb|ABM27227.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio vulgaris DP4]
gi|311235229|gb|ADP88083.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio vulgaris RCH1]
Length = 52
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY Y N KP FD LP ++ CPVCGAPK F
Sbjct: 2 KKYVCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEF 49
>gi|374813099|ref|ZP_09716836.1| rubredoxin [Treponema primitia ZAS-1]
Length = 53
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRP 115
Q ++C CGYIY N KP F LPD++ CP CG K F P
Sbjct: 3 QKFVCDTCGYIYDPTEGDDANGIKPGTEFAALPDDWVCPTCGVGKDGFSP 52
>gi|340623488|ref|YP_004741941.1| rubredoxin-type Fe(Cys)4 protein [Methanococcus maripaludis X1]
gi|339903756|gb|AEK19198.1| rubredoxin-type Fe(Cys)4 protein [Methanococcus maripaludis X1]
Length = 45
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 81 CRDCGYIYNERKP---FDQLPDNYFCPVCGAPKRRF 113
C CGY+Y+E K F +LPD++ CP+CGA K F
Sbjct: 6 CTICGYVYDEEKEEKKFSELPDDWACPICGAKKSAF 41
>gi|268608108|ref|ZP_06141836.1| rubredoxin [Ruminococcus flavefaciens FD-1]
Length = 51
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY Y+E F+ LPD+Y CP+CG K F
Sbjct: 3 YVCDVCGYEYDEELGDPDNGIAPGTKFEDLPDDYVCPLCGVGKDSF 48
>gi|217966585|ref|YP_002352091.1| rubredoxin-type Fe(Cys)4 protein [Dictyoglomus turgidum DSM 6724]
gi|217335684|gb|ACK41477.1| Rubredoxin-type Fe(Cys)4 protein [Dictyoglomus turgidum DSM 6724]
Length = 52
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGY+Y+ + F++LP+++ CPVCGA K F+P
Sbjct: 4 YRCVVCGYVYDPEEGDPEGNIPPGTSFEELPEDWVCPVCGADKSMFKP 51
>gi|220907637|ref|YP_002482948.1| rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7425]
gi|219864248|gb|ACL44587.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7425]
Length = 110
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 11/52 (21%)
Query: 79 YICRDCGYIY-----NERKP------FDQLPDNYFCPVCGAPKRRFRPYTPA 119
Y CR CGYIY ++R+ F LP + CPVCGAP+ +F+ P
Sbjct: 13 YECRACGYIYEPQRGDDRREVPAGTAFVDLPTGWRCPVCGAPRNQFQNIGPV 64
>gi|160932329|ref|ZP_02079720.1| hypothetical protein CLOLEP_01164 [Clostridium leptum DSM 753]
gi|156868931|gb|EDO62303.1| rubredoxin [Clostridium leptum DSM 753]
Length = 52
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ FDQLP+++ CP+CG K F
Sbjct: 4 YVCDVCGYVYDPAVGDPDNGIDPGTSFDQLPEDWVCPLCGVGKDMF 49
>gi|414873507|tpg|DAA52064.1| TPA: hypothetical protein ZEAMMB73_456986 [Zea mays]
Length = 203
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 58 QQQLLASAAPKFSMR-------VASKQAYICRDCGYIYNERK-----------PFDQLPD 99
QQ+ PK R V + + CR CGY Y++ PF QLPD
Sbjct: 80 QQEEDEDGGPKLDPRRFEEKFAVLNTGVHECRSCGYRYDQAAGDPSYPVLPGLPFAQLPD 139
Query: 100 NYFCPVCGAPKRRFR 114
++ CP CGA + F
Sbjct: 140 DWRCPTCGAAQSFFE 154
>gi|301064502|ref|ZP_07204905.1| rubredoxin [delta proteobacterium NaphS2]
gi|300441391|gb|EFK05753.1| rubredoxin [delta proteobacterium NaphS2]
Length = 52
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGY+Y+ + F LP ++ CPVCGA K +F P
Sbjct: 2 EKYVCSVCGYVYDPEEGDPDNGVDAGTAFADLPADWTCPVCGAEKSQFEP 51
>gi|414873504|tpg|DAA52061.1| TPA: hypothetical protein ZEAMMB73_265727 [Zea mays]
Length = 171
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 58 QQQLLASAAPKFSMR-------VASKQAYICRDCGYIYNERK-----------PFDQLPD 99
QQ+ PK R V + + CR CGY Y++ PF QLPD
Sbjct: 80 QQEEDEDGGPKLDPRRFEEKFAVLNTGVHECRSCGYRYDQAAGDSSYPVLPGLPFAQLPD 139
Query: 100 NYFCPVCGAPKRRFR 114
++ CP CGA + F
Sbjct: 140 DWRCPTCGAAQSFFE 154
>gi|365119722|ref|ZP_09337615.1| rubredoxin [Tannerella sp. 6_1_58FAA_CT1]
gi|363648286|gb|EHL87466.1| rubredoxin [Tannerella sp. 6_1_58FAA_CT1]
Length = 53
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Y C C +IY+ PF++LPD++ CPVCG K F P
Sbjct: 3 YRCVVCDWIYDPELGDPDGGIEPGTPFEKLPDDWVCPVCGVGKEDFEP 50
>gi|411118591|ref|ZP_11390972.1| rubredoxin [Oscillatoriales cyanobacterium JSC-12]
gi|410712315|gb|EKQ69821.1| rubredoxin [Oscillatoriales cyanobacterium JSC-12]
Length = 111
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+A+ Y C+ CGYIY K PF +LP ++ CPVCGA RF
Sbjct: 8 LAALDRYECQACGYIYEPTKGDDKRQVPPGTPFAELPSDWRCPVCGARTSRF 59
>gi|428777197|ref|YP_007168984.1| rubredoxin-type Fe(Cys)4 protein [Halothece sp. PCC 7418]
gi|428691476|gb|AFZ44770.1| Rubredoxin-type Fe(Cys)4 protein [Halothece sp. PCC 7418]
Length = 122
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 20/69 (28%)
Query: 56 PHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCP 104
P ++ LA AP Y CR CGY+Y K F++LP + CP
Sbjct: 11 PKTEKTLAETAPS---------RYECRSCGYVYEPNKGDSSQNIPAGTTFEELPSQWRCP 61
Query: 105 VCGAPKRRF 113
VCGA + F
Sbjct: 62 VCGARRNVF 70
>gi|167946894|ref|ZP_02533968.1| Flavin reductase-like, FMN-binding protein [Endoriftia persephone
'Hot96_1+Hot96_2']
gi|345864234|ref|ZP_08816437.1| rubredoxin [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345877018|ref|ZP_08828776.1| hypothetical protein Rifp1Sym_al00130 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225949|gb|EGV52294.1| hypothetical protein Rifp1Sym_al00130 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345124594|gb|EGW54471.1| rubredoxin [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 52
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y C CG++Y+E++ P DQ+P+ + CP CGA K F
Sbjct: 4 YECEICGWVYDEKQGMPEKGIPPGTPLDQIPEEWVCPDCGADKDVF 49
>gi|428297563|ref|YP_007135869.1| rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 6303]
gi|428234107|gb|AFY99896.1| Rubredoxin-type Fe(Cys)4 protein [Calothrix sp. PCC 6303]
Length = 143
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 11/50 (22%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPA 119
CR CGY+Y K PFD LP + CPVC A K F PA
Sbjct: 48 CRSCGYVYEPTKGDEKRDVLPGTPFDDLPATWRCPVCNAKKVAFVNIGPA 97
>gi|375090941|ref|ZP_09737247.1| rubredoxin [Helcococcus kunzii ATCC 51366]
gi|374564732|gb|EHR36013.1| rubredoxin [Helcococcus kunzii ATCC 51366]
Length = 53
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRPY 116
Y C CGYIY N +P F++LPD++ CP+CG K F+ +
Sbjct: 4 YECVACGYIYDPEIGDPENGIEPGTLFEELPDDWVCPICGLDKGEFQKF 52
>gi|281422320|ref|ZP_06253319.1| rubredoxin [Prevotella copri DSM 18205]
gi|281403641|gb|EFB34321.1| rubredoxin [Prevotella copri DSM 18205]
Length = 54
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CG+IY+ F+ +PD++ CP+CG K F P
Sbjct: 2 KKYVCDVCGWIYDPEVGDPEGGIASGTAFEDIPDDWVCPLCGVGKEDFSP 51
>gi|226597567|gb|ABI23729.2| putative rubredoxin [Musa acuminata]
Length = 198
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CGY Y+E F++LPD++ CP CGA K F
Sbjct: 97 VLNTGIYECRSCGYRYDEAAGDPSYPIPPGFQFEKLPDDWRCPTCGAAKSFFE 149
>gi|374339120|ref|YP_005095856.1| rubrerythrin [Marinitoga piezophila KA3]
gi|372100654|gb|AEX84558.1| rubrerythrin [Marinitoga piezophila KA3]
Length = 169
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Query: 48 SLHLLLSPPHQQQLLASAAPKF---SMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCP 104
S H L + + A K + + K+ Y+C+ CGY FD++P+ CP
Sbjct: 105 SAHYALEAEKIHEEMYKEAKKHLETNEDLEDKKVYVCKICGYT-----TFDEIPEK--CP 157
Query: 105 VCGAPKRRFRPY 116
VCGA +F +
Sbjct: 158 VCGATSSQFEEF 169
>gi|333988549|ref|YP_004521156.1| rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. SWAN-1]
gi|333826693|gb|AEG19355.1| Rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. SWAN-1]
Length = 206
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y C C YIY+ + P + LPD++ CP+CG K F P
Sbjct: 3 YECEICHYIYDSDEGDPKFGFKRGMPLEDLPDDWVCPICGIEKEYFHP 50
>gi|291523017|emb|CBK81310.1| Electron transfer flavoprotein, alpha subunit [Coprococcus catus
GD/7]
Length = 259
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 15/69 (21%)
Query: 67 PKFSMRVASKQA-YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
P +S A+ Y+C CGY Y+ K F+ LP+++ CP CG K
Sbjct: 194 PLYSKTTATADGRYVCMGCGYEYDPEKGDPEAGIEPGTSFEALPEDWICPECGVSKSEM- 252
Query: 115 PYTPAVTRG 123
AVTRG
Sbjct: 253 --ISAVTRG 259
>gi|254411427|ref|ZP_05025204.1| rubredoxin [Coleofasciculus chthonoplastes PCC 7420]
gi|196181928|gb|EDX76915.1| rubredoxin [Coleofasciculus chthonoplastes PCC 7420]
Length = 53
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C C Y Y+ K F+ +PD++ CPVCGA K F P
Sbjct: 2 KKYVCTVCNYEYDPEKGDPDGGIEPGTAFEDIPDDWVCPVCGAAKSDFEP 51
>gi|342215262|ref|ZP_08707912.1| rubredoxin [Veillonella sp. oral taxon 780 str. F0422]
gi|341588648|gb|EGS32033.1| rubredoxin [Veillonella sp. oral taxon 780 str. F0422]
Length = 45
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 77 QAYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+E F+ P +Y CPVCG K +F
Sbjct: 3 KKYVCVVCGWVYDEAVEGVKFEDQPADYLCPVCGVGKDQF 42
>gi|389578016|ref|ZP_10168044.1| hypothetical protein EubceDRAFT1_2732 [Eubacterium cellulosolvens
6]
gi|389313501|gb|EIM58434.1| hypothetical protein EubceDRAFT1_2732 [Eubacterium cellulosolvens
6]
Length = 52
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
Y CR CGY+++E K + D CP CG P RF
Sbjct: 4 YKCRACGYVFDEEKEGRSIRDIDVCPRCGQPDDRF 38
>gi|331083712|ref|ZP_08332823.1| rubredoxin [Lachnospiraceae bacterium 6_1_63FAA]
gi|330403923|gb|EGG83475.1| rubredoxin [Lachnospiraceae bacterium 6_1_63FAA]
Length = 54
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY+Y N +P F+ +P+++ CP+CG K F P
Sbjct: 2 QKYVCEPCGYVYDPELGDPDNGVEPGTAFEDIPEDWVCPICGLGKDEFVP 51
>gi|434406166|ref|YP_007149051.1| rubredoxin [Cylindrospermum stagnale PCC 7417]
gi|428260421|gb|AFZ26371.1| rubredoxin [Cylindrospermum stagnale PCC 7417]
Length = 114
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
Y CR CGY+Y K F +LP N+ CPVC A K F PA T
Sbjct: 17 YECRSCGYVYEPEKGDDKQDIVSGTLFAELPANWRCPVCNAKKVAFANIGPAGT 70
>gi|78188130|ref|YP_378468.1| rubredoxin [Chlorobium chlorochromatii CaD3]
gi|78170329|gb|ABB27425.1| rubredoxin [Chlorobium chlorochromatii CaD3]
Length = 52
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ ++C CGY+Y+ PF+ LPD++ CPVCG K F
Sbjct: 2 EKWVCVPCGYVYDPEVGDPDSGVAPGTPFEALPDDWVCPVCGMDKSSF 49
>gi|414873503|tpg|DAA52060.1| TPA: hypothetical protein ZEAMMB73_812202 [Zea mays]
gi|414873509|tpg|DAA52066.1| TPA: hypothetical protein ZEAMMB73_522315 [Zea mays]
Length = 178
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 18/69 (26%)
Query: 58 QQQLLASAAPKFSMR-------VASKQAYICRDCGYIYNERK-----------PFDQLPD 99
QQQ PK R + + + CR CGY Y++ PF QLPD
Sbjct: 80 QQQEDEDGGPKLDPRRFEEKFVMLNTGVHECRSCGYRYDQEAGDPSYLVPPGLPFAQLPD 139
Query: 100 NYFCPVCGA 108
++ CP CG
Sbjct: 140 DWLCPTCGT 148
>gi|337288096|ref|YP_004627568.1| Rubredoxin-type Fe(Cys)4 protein [Thermodesulfobacterium sp. OPB45]
gi|334901834|gb|AEH22640.1| Rubredoxin-type Fe(Cys)4 protein [Thermodesulfobacterium geofontis
OPF15]
Length = 53
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGY+Y+ PF++LP+N+ CP+CGA K F
Sbjct: 2 KKYKCSVCGYVYDPEVGDPNQEIPPGTPFEKLPNNWTCPICGAAKNDF 49
>gi|433552094|pdb|1RB9|A Chain A, Rubredoxin From Desulfovibrio Vulgaris Refined
Anisotropically At 0.92 Angstroms Resolution
Length = 52
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY Y N KP FD LP ++ CPVCGAPK F
Sbjct: 2 KKYVCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEF 49
>gi|78358234|ref|YP_389683.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio alaskensis G20]
gi|78220639|gb|ABB39988.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio alaskensis G20]
Length = 52
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGY Y+ E P ++ +P ++ CPVCGAPK F P
Sbjct: 2 QKYVCNICGYEYDPAEGDPDNGVAPGTAWEDVPSDWLCPVCGAPKSEFEP 51
>gi|325958753|ref|YP_004290219.1| rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. AL-21]
gi|325330185|gb|ADZ09247.1| Rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. AL-21]
Length = 53
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ E P F+ LPD++ CP+CG K F
Sbjct: 2 KKYLCTACGYVYDPEEGDPDNGIDPGTAFEDLPDDWVCPLCGVGKELF 49
>gi|187250437|ref|YP_001874919.1| rubredoxin-type Fe(Cys)4 protein [Elusimicrobium minutum Pei191]
gi|186970597|gb|ACC97582.1| Rubredoxin Rdl [Elusimicrobium minutum Pei191]
Length = 52
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGYIY+ P++Q+P ++ CP CG K +F P
Sbjct: 2 QKYVCNVCGYIYDPAAGDPDSGITAGTPWEQVPADWVCPACGVGKDQFSP 51
>gi|449482940|ref|XP_004156449.1| PREDICTED: rubredoxin-like [Cucumis sativus]
Length = 201
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CG+ ++E PF+QLP+++ CP CGA K F
Sbjct: 100 VLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFE 152
>gi|228947463|ref|ZP_04109753.1| hypothetical protein bthur0007_35910 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228811983|gb|EEM58314.1| hypothetical protein bthur0007_35910 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 54
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIY+ F+ LP+++ CPVCG F P
Sbjct: 2 KKYICLPCGYIYDPEIGDPDEDIEPGTSFEDLPEDWVCPVCGEDTEHFAP 51
>gi|414873500|tpg|DAA52057.1| TPA: hypothetical protein ZEAMMB73_807203 [Zea mays]
Length = 213
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 18/75 (24%)
Query: 58 QQQLLASAAPKFSMR-------VASKQAYICRDCGYIYNERK-----------PFDQLPD 99
QQQ PK R V + + C+ CGY Y++ PF QLPD
Sbjct: 90 QQQEDEDGGPKLDPRRFEEKFAVLNTGVHECQSCGYRYDQAAGDPSYPVPPGLPFAQLPD 149
Query: 100 NYFCPVCGAPKRRFR 114
++ CP CGA + F
Sbjct: 150 DWRCPTCGAAQSFFE 164
>gi|343086394|ref|YP_004775689.1| rubredoxin-type Fe(Cys)4 protein [Cyclobacterium marinum DSM 745]
gi|342354928|gb|AEL27458.1| Rubredoxin-type Fe(Cys)4 protein [Cyclobacterium marinum DSM 745]
Length = 476
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 45 SAPSLHLLLSPPHQQQLLASAAPKFSMRVASK-----QAYICRDCGYIYNER-------- 91
+ P L + LS + QL +++ AS+ + Y C++C +++E+
Sbjct: 387 TLPPLLIELSYKYYDQLELQKTQEYTDPKASEVKKINKKYQCKNCLSVFDEKYGDPESDI 446
Query: 92 ---KPFDQLPDNYFCPVCGAPKRRFR 114
F +LPDNY CP+C +PK F+
Sbjct: 447 EPYTSFIKLPDNYTCPICDSPKSAFK 472
>gi|319790106|ref|YP_004151739.1| Rubredoxin-type Fe(Cys)4 protein [Thermovibrio ammonificans HB-1]
gi|317114608|gb|ADU97098.1| Rubredoxin-type Fe(Cys)4 protein [Thermovibrio ammonificans HB-1]
Length = 54
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ + C CGY+Y+ PF++LPD++ CP CGA K F P
Sbjct: 2 KKFYCVPCGYVYDPELGDPDNGIPPGTPFEELPDDWTCPWCGAGKEDFEP 51
>gi|284048341|ref|YP_003398680.1| rubrerythrin [Acidaminococcus fermentans DSM 20731]
gi|283952562|gb|ADB47365.1| Rubrerythrin [Acidaminococcus fermentans DSM 20731]
Length = 182
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKAR 133
+ICR CGY+Y ++ P+ CP CGAPK +F V A++ V A+
Sbjct: 4 FICRVCGYVYE----GEEAPEK--CPQCGAPKDKFDELKEGVKEYADEHVVGVAK 52
>gi|282897135|ref|ZP_06305137.1| Rubredoxin-type Fe(Cys)4 protein [Raphidiopsis brookii D9]
gi|281197787|gb|EFA72681.1| Rubredoxin-type Fe(Cys)4 protein [Raphidiopsis brookii D9]
Length = 114
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 22/99 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
Y CR CGY+Y K F LP N+ CPVC A K F P T
Sbjct: 17 YECRACGYVYEPEKGDDKYNIPAGTAFADLPTNWKCPVCSAKKVAFANIGP--------T 68
Query: 128 AVRKARKEQIQRDEAIGKALPI---AIAVAAVALAGLYF 163
KE + + + P + A+ALA L+F
Sbjct: 69 GTASGFKENLGYGLGVNQLTPTQKNILIFGALALAFLFF 107
>gi|377820217|ref|YP_004976588.1| rubredoxin-like protein [Burkholderia sp. YI23]
gi|357935052|gb|AET88611.1| rubredoxin-like protein [Burkholderia sp. YI23]
Length = 104
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 57 HQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPV 105
H +L S V ++++C CG+IYNE + FD +P ++ CP+
Sbjct: 32 HTVRLFLSNQESVVSEVIEYKSWVCLICGWIYNEEEGLPDEGIAAGTRFDDIPADWRCPL 91
Query: 106 CGAPKRRF 113
C K F
Sbjct: 92 CDVGKADF 99
>gi|310779126|ref|YP_003967459.1| rubredoxin-type Fe(Cys)4 protein [Ilyobacter polytropus DSM 2926]
gi|309748449|gb|ADO83111.1| Rubredoxin-type Fe(Cys)4 protein [Ilyobacter polytropus DSM 2926]
Length = 53
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRF 113
+ + C CGYIY+ KP F+ LP+++ CP+CGAPK F
Sbjct: 2 EKWRCVPCGYIYDPEIGDEAGGIKPGVKFEDLPEDWVCPLCGAPKEDF 49
>gi|309775839|ref|ZP_07670833.1| high molecular weight rubredoxin (Nitric oxide reductase
NADH:FprAoxidoreductase) [Erysipelotrichaceae bacterium
3_1_53]
gi|308916377|gb|EFP62123.1| high molecular weight rubredoxin (Nitric oxide reductase
NADH:FprAoxidoreductase) [Erysipelotrichaceae bacterium
3_1_53]
Length = 207
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 66 APKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
AP + + + K + C CGYIY D LP++Y CP+CGAP F
Sbjct: 162 APSYQEK-SEKSGWRCTICGYIYEG----DPLPEDYVCPLCGAPAALFE 205
>gi|406903606|gb|EKD45633.1| hypothetical protein ACD_69C00201G0003 [uncultured bacterium]
Length = 54
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 11/52 (21%)
Query: 76 KQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
++ YIC CGY+Y+ F++LP+++ CP+C K+ F Y
Sbjct: 2 EKKYICNVCGYVYDSTNGDPDAGVAPGVAFEKLPEDWVCPICKVGKQEFSAY 53
>gi|94263789|ref|ZP_01287595.1| Rubredoxin-type Fe(Cys)4 protein [delta proteobacterium MLMS-1]
gi|94266487|ref|ZP_01290178.1| Rubredoxin-type Fe(Cys)4 protein [delta proteobacterium MLMS-1]
gi|93452902|gb|EAT03413.1| Rubredoxin-type Fe(Cys)4 protein [delta proteobacterium MLMS-1]
gi|93455800|gb|EAT05967.1| Rubredoxin-type Fe(Cys)4 protein [delta proteobacterium MLMS-1]
Length = 76
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 14/64 (21%)
Query: 76 KQAYICR--DCGYIYN----ERK-------PFDQLPDNYFCPVCGAPKRRFRPYT-PAVT 121
++ Y C+ +CGY+Y+ +RK F+ LP+++ CP+CG K+ FRP P T
Sbjct: 5 EEMYQCQTSNCGYVYDPDRGDRKGKIAAGTKFEDLPEDWRCPICGGTKKCFRPLAGPGST 64
Query: 122 RGAN 125
+ +N
Sbjct: 65 KESN 68
>gi|423302968|ref|ZP_17280989.1| rubredoxin [Bacteroides finegoldii CL09T03C10]
gi|408470297|gb|EKJ88832.1| rubredoxin [Bacteroides finegoldii CL09T03C10]
Length = 54
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C YIY+ + F+ +P+++ CP+CG K F PY
Sbjct: 2 KKYICTVCEYIYDPEQGDPESGIEPGTAFEDIPEDWTCPLCGVGKEDFEPY 52
>gi|354557046|ref|ZP_08976305.1| Rubredoxin-type Fe(Cys)4 protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353550631|gb|EHC20060.1| Rubredoxin-type Fe(Cys)4 protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 114
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 17/71 (23%)
Query: 61 LLASAAPKFSMRVASKQA------YICRDCGYIYN--ERKP---------FDQLPDNYFC 103
L +F + KQ YIC CGY+Y+ + P F+ +PD++ C
Sbjct: 41 LCGVTKAEFEIVADEKQEASNTTQYICTGCGYVYDPVQGDPDGGIAPGTAFEDIPDDWVC 100
Query: 104 PVCGAPKRRFR 114
P+CG K F
Sbjct: 101 PLCGVTKAEFE 111
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
+ Y+C CGYIY+ F+ +PD + CP+CG K F
Sbjct: 2 KKYLCPGCGYIYDPALGDPEGGIAPGTAFEDIPDTWVCPLCGVTKAEFE 50
>gi|428306632|ref|YP_007143457.1| rubredoxin-type Fe(Cys)4 protein [Crinalium epipsammum PCC 9333]
gi|428248167|gb|AFZ13947.1| Rubredoxin-type Fe(Cys)4 protein [Crinalium epipsammum PCC 9333]
Length = 111
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 11/52 (21%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPA 119
Y CR CGY Y K FD+LP N+ CPVCGA F+ P
Sbjct: 14 YECRACGYTYEPEKGDSKNNIPPGTTFDELPLNWRCPVCGAKTTAFQNLGPV 65
>gi|20808541|ref|NP_623712.1| rubredoxin [Thermoanaerobacter tengcongensis MB4]
gi|20517167|gb|AAM25316.1| Rubredoxin [Thermoanaerobacter tengcongensis MB4]
Length = 52
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ + C CGYIY+ K PF++LPD++ CP CGA K F
Sbjct: 2 EKWQCTVCGYIYDPEKGDPSQGIPPGTPFEELPDDWVCPDCGAGKDLF 49
>gi|330508459|ref|YP_004384887.1| rubredoxin [Methanosaeta concilii GP6]
gi|328929267|gb|AEB69069.1| rubredoxin [Methanosaeta concilii GP6]
Length = 53
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ K F+ LPD++ CP CG K F
Sbjct: 4 YVCTVCGYIYDPEKGDSASGIAPGTAFEDLPDDWTCPECGVGKELF 49
>gi|404486751|ref|ZP_11021940.1| hypothetical protein HMPREF9448_02386 [Barnesiella intestinihominis
YIT 11860]
gi|404336008|gb|EJZ62472.1| hypothetical protein HMPREF9448_02386 [Barnesiella intestinihominis
YIT 11860]
Length = 214
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Query: 75 SKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
S + YIC CGYI+ +LPD++ CPVC AP+ F+
Sbjct: 178 SGKKYICEVCGYIHE-----GELPDDFKCPVCQAPRSCFK 212
>gi|291460319|ref|ZP_06599709.1| rubredoxin [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417074|gb|EFE90793.1| rubredoxin [Oribacterium sp. oral taxon 078 str. F0262]
Length = 54
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y+C CGYIY+ K ++ +P+++ CP+CG K +F P
Sbjct: 4 YVCTVCGYIYDPEKGEPDSGVAAGTSWEDVPEDFVCPLCGVGKDQFEP 51
>gi|114567565|ref|YP_754719.1| flavoprotein [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114338500|gb|ABI69348.1| putative flavoprotein [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 884
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 21/35 (60%), Gaps = 6/35 (17%)
Query: 81 CRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
CR CGYI+ +P PD CPVCGAPK F P
Sbjct: 854 CRLCGYIHEGPEP----PD--ICPVCGAPKDMFDP 882
>gi|307136059|gb|ADN33910.1| rubredoxin [Cucumis melo subsp. melo]
Length = 198
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CG+ ++E PF+QLP+++ CP CGA K F
Sbjct: 97 VLNTGIYECRSCGHKFDEAVGDPTYPIAPGLPFEQLPEDWRCPTCGAAKSFFE 149
>gi|187932460|ref|YP_001886760.1| rubredoxin [Clostridium botulinum B str. Eklund 17B]
gi|187720613|gb|ACD21834.1| rubredoxin [Clostridium botulinum B str. Eklund 17B]
Length = 53
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
+ YIC CGYIY N KP F+ LP N+ CP+C K F
Sbjct: 2 KKYICDICGYIYDPEMGDVDNNIKPGMKFEDLPCNWICPICNFEKENF 49
>gi|325857418|ref|ZP_08172473.1| rubredoxin [Prevotella denticola CRIS 18C-A]
gi|325483128|gb|EGC86108.1| rubredoxin [Prevotella denticola CRIS 18C-A]
Length = 54
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ Y+C CGY+Y+ K F+ LP+++ CP CG K +F Y
Sbjct: 2 KKYVCDVCGYVYDPAKGDPDNGVAPGTAFEDLPEDWVCPECGVEKDQFSEY 52
>gi|22299239|ref|NP_682486.1| rubredoxin [Thermosynechococcus elongatus BP-1]
gi|22295421|dbj|BAC09248.1| rubredoxin [Thermosynechococcus elongatus BP-1]
Length = 111
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPA 119
VA + CR CGYIY K F LP N+ CPVC APK++F P
Sbjct: 8 VAPLDRFECRACGYIYEPAKGDENRSIPPGTAFADLPLNWRCPVCSAPKKQFSNIGPV 65
>gi|406890618|gb|EKD36469.1| rubredoxin-type Fe(Cys)4 protein [uncultured bacterium]
Length = 52
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
++C CGYIY+ E P ++ +P+++ CP+CGAPK F
Sbjct: 4 WVCSICGYIYDPAEGDPDNGVDPGTAWEDVPEDWLCPICGAPKSDF 49
>gi|347733440|ref|ZP_08866499.1| rubredoxin-2 domain protein [Desulfovibrio sp. A2]
gi|347517801|gb|EGY24987.1| rubredoxin-2 domain protein [Desulfovibrio sp. A2]
Length = 75
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 13/53 (24%)
Query: 76 KQAYICR--DCGYIYN----ERKP-------FDQLPDNYFCPVCGAPKRRFRP 115
K + C+ +CGY+Y+ +RK F+ LPD++ CPVCG KR FRP
Sbjct: 5 KDMWRCQTVNCGYVYDPDRGDRKGKVAPGVRFEDLPDDWRCPVCGGTKRCFRP 57
>gi|116750643|ref|YP_847330.1| rubredoxin-type Fe(Cys)4 protein [Syntrophobacter fumaroxidans
MPOB]
gi|116699707|gb|ABK18895.1| Rubredoxin-type Fe(Cys)4 protein [Syntrophobacter fumaroxidans
MPOB]
Length = 52
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y N+ P F+ LP+++ CPVCGA K F
Sbjct: 4 YVCTVCGYVYDPAVGDPDNDIAPGTKFEDLPEDWVCPVCGAAKSDF 49
>gi|366164098|ref|ZP_09463853.1| flavin reductase domain-containing FMN-binding protein [Acetivibrio
cellulolyticus CD2]
Length = 52
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ FD +PD + CPVCG K F
Sbjct: 4 YVCTVCGYIYDPAVGDPDGGIAPGTSFDDIPDEWVCPVCGVGKDSF 49
>gi|423090328|ref|ZP_17078636.1| rubredoxin [Clostridium difficile 70-100-2010]
gi|357556775|gb|EHJ38352.1| rubredoxin [Clostridium difficile 70-100-2010]
Length = 480
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 79 YICRDCGYIYNE---RKPFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIY+E K +D+L +++ CPVC + F
Sbjct: 4 YKCSVCGYIYDESKNDKTWDELSEDWECPVCTKGRSYF 41
>gi|260642649|ref|ZP_05416763.2| rubredoxin [Bacteroides finegoldii DSM 17565]
gi|260621128|gb|EEX43999.1| rubredoxin [Bacteroides finegoldii DSM 17565]
Length = 67
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C YIY+ + F+ +PD++ CP+CG K F PY
Sbjct: 15 KKYICTVCEYIYDPEQGDPESGIEPGTAFEDIPDDWTCPLCGVGKEDFEPY 65
>gi|167628563|ref|YP_001679062.1| rubredoxin [Heliobacterium modesticaldum Ice1]
gi|167591303|gb|ABZ83051.1| rubredoxin [Heliobacterium modesticaldum Ice1]
Length = 52
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGY+Y+ K PF++L DN+ CP+CG K F
Sbjct: 2 KKYGCLVCGYVYDPAKGDPDNGVAPGTPFEELADNWVCPLCGVGKDEF 49
>gi|94266685|ref|ZP_01290360.1| Rubredoxin-type Fe(Cys)4 protein [delta proteobacterium MLMS-1]
gi|94269341|ref|ZP_01291434.1| Rubredoxin-type Fe(Cys)4 protein [delta proteobacterium MLMS-1]
gi|93451253|gb|EAT02148.1| Rubredoxin-type Fe(Cys)4 protein [delta proteobacterium MLMS-1]
gi|93452673|gb|EAT03230.1| Rubredoxin-type Fe(Cys)4 protein [delta proteobacterium MLMS-1]
Length = 53
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ FD LP+++ CP+CGA K +F P
Sbjct: 2 KKYECDICGYIYDPASGDQDNGIAPGTSFDDLPESWTCPICGADKSQFSP 51
>gi|422329767|ref|ZP_16410792.1| hypothetical protein HMPREF0981_04112 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371655631|gb|EHO20971.1| hypothetical protein HMPREF0981_04112 [Erysipelotrichaceae
bacterium 6_1_45]
Length = 466
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 79 YICRDCGYIYN---ERKPFDQLPDNYFCPVCGAPKRRFRPYTP----AVTRGANDT---A 128
Y+C CGY+Y+ E + L + CP+C APK F+ + T +ND A
Sbjct: 3 YVCEICGYMYDEAVEGTSWVNLDSTWKCPLCTAPKECFKKVASEEDASATSKSNDATSLA 62
Query: 129 VRK-ARKEQI 137
++K A+KE I
Sbjct: 63 IQKNAKKEDI 72
>gi|423082050|ref|ZP_17070645.1| rubredoxin [Clostridium difficile 002-P50-2011]
gi|423085654|ref|ZP_17074096.1| rubredoxin [Clostridium difficile 050-P50-2011]
gi|357549300|gb|EHJ31147.1| rubredoxin [Clostridium difficile 002-P50-2011]
gi|357549571|gb|EHJ31417.1| rubredoxin [Clostridium difficile 050-P50-2011]
Length = 480
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 79 YICRDCGYIYNE---RKPFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIY+E K +D+L +++ CPVC + F
Sbjct: 4 YKCSVCGYIYDESKNDKTWDELSEDWECPVCTKGRSYF 41
>gi|374321048|ref|YP_005074177.1| Rubredoxin 3 (Rd 3) [Paenibacillus terrae HPL-003]
gi|357200057|gb|AET57954.1| Rubredoxin 3 (Rd 3) [Paenibacillus terrae HPL-003]
Length = 56
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C+ CGYIY+ F+ LP+++ CPVCG + F P
Sbjct: 2 KKYVCQPCGYIYDPAVGDPDEDVMPGTAFEDLPEDWVCPVCGEDQSHFAP 51
>gi|126698408|ref|YP_001087305.1| oxidative stress glutamate synthase [Clostridium difficile 630]
gi|255099941|ref|ZP_05328918.1| putative oxidative stress protein [Clostridium difficile QCD-63q42]
gi|255305830|ref|ZP_05350002.1| putative oxidative stress protein [Clostridium difficile ATCC
43255]
gi|115249845|emb|CAJ67662.1| putative oxidative stress glutamate synthase [Clostridium difficile
630]
Length = 480
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 79 YICRDCGYIYNE---RKPFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIY+E K +D+L +++ CPVC + F
Sbjct: 4 YKCSVCGYIYDESKNDKTWDELSEDWECPVCTKGRSYF 41
>gi|254974447|ref|ZP_05270919.1| putative oxidative stress protein [Clostridium difficile QCD-66c26]
gi|255091839|ref|ZP_05321317.1| putative oxidative stress protein [Clostridium difficile CIP
107932]
gi|255313574|ref|ZP_05355157.1| putative oxidative stress protein [Clostridium difficile QCD-76w55]
gi|255516258|ref|ZP_05383934.1| putative oxidative stress protein [Clostridium difficile QCD-97b34]
gi|255649355|ref|ZP_05396257.1| putative oxidative stress protein [Clostridium difficile QCD-37x79]
gi|260682527|ref|YP_003213812.1| oxidative stress protein [Clostridium difficile CD196]
gi|260686126|ref|YP_003217259.1| oxidative stress protein [Clostridium difficile R20291]
gi|306519445|ref|ZP_07405792.1| putative oxidative stress protein [Clostridium difficile QCD-32g58]
gi|384360105|ref|YP_006197957.1| oxidative stress protein [Clostridium difficile BI1]
gi|260208690|emb|CBA61486.1| putative oxidative stress protein [Clostridium difficile CD196]
gi|260212142|emb|CBE02783.1| putative oxidative stress protein [Clostridium difficile R20291]
Length = 480
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 79 YICRDCGYIYNER---KPFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIY+E K +D+L +++ CPVC + F
Sbjct: 4 YKCSVCGYIYDESKNDKTWDELSEDWECPVCTKGRSYF 41
>gi|390454710|ref|ZP_10240238.1| Rubredoxin 3 (Rd 3) [Paenibacillus peoriae KCTC 3763]
Length = 56
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C+ CGYIY+ F+ LP+++ CPVCG + F P
Sbjct: 2 KKYVCQPCGYIYDPAVGDPDEDVMPGTAFEDLPEDWVCPVCGEDQSHFAP 51
>gi|375311218|ref|ZP_09776474.1| Rubredoxin 3 (Rd 3) [Paenibacillus sp. Aloe-11]
gi|375076724|gb|EHS54976.1| Rubredoxin 3 (Rd 3) [Paenibacillus sp. Aloe-11]
Length = 56
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C+ CGYIY+ F+ LP+++ CPVCG + F P
Sbjct: 2 KKYVCQPCGYIYDPAIGDPDEDVMPGTAFEDLPEDWVCPVCGEDQSHFAP 51
>gi|373125011|ref|ZP_09538849.1| hypothetical protein HMPREF0982_03778 [Erysipelotrichaceae
bacterium 21_3]
gi|371658232|gb|EHO23514.1| hypothetical protein HMPREF0982_03778 [Erysipelotrichaceae
bacterium 21_3]
Length = 207
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 66 APKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
AP + + + K + C CGYIY D LP +Y CP+CGAP F
Sbjct: 162 APSYQEK-SEKSGWRCTICGYIYEG----DPLPQDYVCPLCGAPAALFE 205
>gi|428318876|ref|YP_007116758.1| Rubredoxin-type Fe(Cys)4 protein [Oscillatoria nigro-viridis PCC
7112]
gi|428242556|gb|AFZ08342.1| Rubredoxin-type Fe(Cys)4 protein [Oscillatoria nigro-viridis PCC
7112]
Length = 52
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C C Y+Y+ F+ +PD++ CP CGA K F P
Sbjct: 2 QKYVCTVCNYVYDPEVGDPDGGIAPGTAFEDIPDDWVCPTCGAVKSDFEP 51
>gi|52841765|ref|YP_095564.1| rubredoxin (rubredoxin-type Fe(Cys)4 protein) [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|54294422|ref|YP_126837.1| hypothetical protein lpl1491 [Legionella pneumophila str. Lens]
gi|54297447|ref|YP_123816.1| hypothetical protein lpp1492 [Legionella pneumophila str. Paris]
gi|148359069|ref|YP_001250276.1| rubredoxin [Legionella pneumophila str. Corby]
gi|296107117|ref|YP_003618817.1| rubredoxin-NAD reductase [Legionella pneumophila 2300/99 Alcoy]
gi|378777400|ref|YP_005185837.1| rubredoxin (rubredoxin-type Fe(Cys)4 protein) [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|397663976|ref|YP_006505514.1| Rubredoxin (Rd) [Legionella pneumophila subsp. pneumophila]
gi|397667157|ref|YP_006508694.1| Rubredoxin (Rd) [Legionella pneumophila subsp. pneumophila]
gi|52628876|gb|AAU27617.1| rubredoxin (rubredoxin-type Fe(Cys)4 protein) [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|53751232|emb|CAH12643.1| hypothetical protein lpp1492 [Legionella pneumophila str. Paris]
gi|53754254|emb|CAH15731.1| hypothetical protein lpl1491 [Legionella pneumophila str. Lens]
gi|148280842|gb|ABQ54930.1| rubredoxin (rubredoxin-type Fe(Cys)4 protein) [Legionella
pneumophila str. Corby]
gi|295649018|gb|ADG24865.1| rubredoxin-NAD reductase [Legionella pneumophila 2300/99 Alcoy]
gi|307610234|emb|CBW99795.1| hypothetical protein LPW_15581 [Legionella pneumophila 130b]
gi|364508214|gb|AEW51738.1| rubredoxin (rubredoxin-type Fe(Cys)4 protein) [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|395127387|emb|CCD05579.1| Rubredoxin (Rd) [Legionella pneumophila subsp. pneumophila]
gi|395130568|emb|CCD08813.1| Rubredoxin (Rd) [Legionella pneumophila subsp. pneumophila]
Length = 58
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNERKPF-----------DQLPDNYFCPVCGAPKRRFR 114
YIC CG+IY+E + + + +P+N+FCP CGA K F
Sbjct: 7 YICVICGFIYDEAEGWPEDGIEPGTRWEDVPENWFCPDCGAGKEDFE 53
>gi|374308135|ref|YP_005054566.1| butyryl-CoA dehydrogenase [Filifactor alocis ATCC 35896]
gi|291165783|gb|EFE27831.1| butyryl-CoA dehydrogenase [Filifactor alocis ATCC 35896]
Length = 643
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 40/105 (38%), Gaps = 34/105 (32%)
Query: 20 PLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFSMRVASKQAY 79
PLL +N + PA P + + S P + AP + + Y
Sbjct: 552 PLLTEALDNGKEKDPA----------PPMVKMKRSKPKK------LAPNYKL-------Y 588
Query: 80 ICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRF 113
+C CGY Y+ E FD+LPD + CP CG K F
Sbjct: 589 VCNGCGYEYDAKLGDSENDIMEGTIFDKLPDEWICPKCGEEKHNF 633
>gi|75908715|ref|YP_323011.1| rubredoxin-type Fe(Cys)4 protein [Anabaena variabilis ATCC 29413]
gi|75702440|gb|ABA22116.1| Rubredoxin-type Fe(Cys)4 protein [Anabaena variabilis ATCC 29413]
Length = 54
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
++C CGY Y+ PF+++P+++ CPVCGA K F P
Sbjct: 4 HVCTVCGYEYDPEVGDPDSGIAAATPFEEIPEDWVCPVCGATKDLFEP 51
>gi|187933934|ref|YP_001886236.1| rubredoxin [Clostridium botulinum B str. Eklund 17B]
gi|187722087|gb|ACD23308.1| rubredoxin [Clostridium botulinum B str. Eklund 17B]
Length = 53
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 78 AYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
+Y+C CGYIY N P F+ + D++ CP+CG PK F
Sbjct: 3 SYVCTVCGYIYDPVVGDTDNGVAPGTKFEDIADDWVCPLCGVPKSDF 49
>gi|388456401|ref|ZP_10138696.1| rubredoxin (rubredoxin-type Fe(Cys)4 protein) [Fluoribacter
dumoffii Tex-KL]
Length = 58
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERKPF-----------DQLPDNYFCPVCGAPKRRF 113
+ YIC CG+IY+E + + + +P+N+FCP CGA K F
Sbjct: 5 KKYICVICGFIYDEAEGWPEDGIEPGTRWEDVPENWFCPDCGAGKEDF 52
>gi|168179573|ref|ZP_02614237.1| rubredoxin [Clostridium botulinum NCTC 2916]
gi|421836857|ref|ZP_16271207.1| rubredoxin [Clostridium botulinum CFSAN001627]
gi|182669810|gb|EDT81786.1| rubredoxin [Clostridium botulinum NCTC 2916]
gi|409741151|gb|EKN41103.1| rubredoxin [Clostridium botulinum CFSAN001627]
Length = 52
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ + F+ +P+++ CP+CG PK F
Sbjct: 2 KKYLCEACGYIYDPEQGDPDNGVAPGTTFENVPEDWVCPLCGLPKSEF 49
>gi|402835503|ref|ZP_10884067.1| rubredoxin [Mogibacterium sp. CM50]
gi|402274054|gb|EJU23241.1| rubredoxin [Mogibacterium sp. CM50]
Length = 54
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRPY 116
Q Y+C CGY+Y N +P F+ LPD++ CP+C K F Y
Sbjct: 2 QKYVCDVCGYVYDPAVGDPDNGIEPGTAFEDLPDDWVCPLCEVSKDMFSEY 52
>gi|302346529|ref|YP_003814827.1| rubredoxin [Prevotella melaninogenica ATCC 25845]
gi|302151098|gb|ADK97359.1| rubredoxin [Prevotella melaninogenica ATCC 25845]
Length = 54
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ F+ +PD++ CP+CG K F P
Sbjct: 2 KKYECETCGYIYDPELGDPDSGIEPGTAFEDIPDDWVCPLCGVGKDDFTP 51
>gi|373496552|ref|ZP_09587098.1| hypothetical protein HMPREF0402_00971 [Fusobacterium sp. 12_1B]
gi|371965441|gb|EHO82941.1| hypothetical protein HMPREF0402_00971 [Fusobacterium sp. 12_1B]
Length = 636
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 15/71 (21%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIY--------NERKP---FDQLPDNYF 102
+PP ++ + A PK + + + ++C CGY Y N+ KP F+ LP+ +
Sbjct: 567 APPMKK--MKRAIPK--KEIPTWKRHVCNGCGYEYDPAVGDEENDIKPGTLFEALPEEWI 622
Query: 103 CPVCGAPKRRF 113
CP+CG K F
Sbjct: 623 CPICGESKDMF 633
>gi|255654872|ref|ZP_05400281.1| putative oxidative stress protein [Clostridium difficile QCD-23m63]
gi|296449618|ref|ZP_06891394.1| glutamate synthase domain protein [Clostridium difficile NAP08]
gi|296878062|ref|ZP_06902077.1| glutamate synthase domain protein [Clostridium difficile NAP07]
gi|296261554|gb|EFH08373.1| glutamate synthase domain protein [Clostridium difficile NAP08]
gi|296430815|gb|EFH16647.1| glutamate synthase domain protein [Clostridium difficile NAP07]
Length = 480
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 79 YICRDCGYIYNE---RKPFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIY+E K +D+L +++ CPVC + F
Sbjct: 4 YKCSVCGYIYDESKNDKTWDELSEDWECPVCTKGRSYF 41
>gi|429739028|ref|ZP_19272798.1| rubredoxin [Prevotella saccharolytica F0055]
gi|429157991|gb|EKY00559.1| rubredoxin [Prevotella saccharolytica F0055]
Length = 54
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYLCETCGYIYDPAVGDPDGGIAPGTAFEDIPDDWVCPICGVGKDDF 49
>gi|331086715|ref|ZP_08335792.1| hypothetical protein HMPREF0987_02095 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409881|gb|EGG89316.1| hypothetical protein HMPREF0987_02095 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 596
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
K+ ++C CGYIY ++LPD+Y CP+C F P
Sbjct: 560 KKGFVCVVCGYIYEG----EELPDDYICPLCKHGVADFEP 595
>gi|325663106|ref|ZP_08151556.1| hypothetical protein HMPREF0490_02297 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470560|gb|EGC73790.1| hypothetical protein HMPREF0490_02297 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 596
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
K+ ++C CGYIY ++LPD+Y CP+C F P
Sbjct: 560 KKGFVCVVCGYIYEG----EELPDDYICPLCKHGVADFEP 595
>gi|148381030|ref|YP_001255571.1| rubredoxin [Clostridium botulinum A str. ATCC 3502]
gi|148290514|emb|CAL84642.1| rubredoxin [Clostridium botulinum A str. ATCC 3502]
Length = 52
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ + F+ +P+++ CP+CG PK F
Sbjct: 2 KKYLCEACGYIYDPEQGDPDNGVAPGTSFENVPEDWVCPLCGLPKSEF 49
>gi|124485002|ref|YP_001029618.1| hypothetical protein Mlab_0175 [Methanocorpusculum labreanum Z]
gi|124362543|gb|ABN06351.1| Rubredoxin-type Fe(Cys)4 protein [Methanocorpusculum labreanum Z]
Length = 51
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 10/46 (21%)
Query: 79 YICRDCGYIYNERK----------PFDQLPDNYFCPVCGAPKRRFR 114
Y C CGY+Y+ K F+ LPD + CPVCGA K +F+
Sbjct: 4 YRCSVCGYVYDPEKGAGIMYPPGTAFESLPDTWKCPVCGASKSQFK 49
>gi|15221842|ref|NP_175852.1| rubredoxin-like protein [Arabidopsis thaliana]
gi|4585992|gb|AAD25628.1|AC005287_30 Hypothetical protein [Arabidopsis thaliana]
gi|13926206|gb|AAK49581.1|AF370575_1 Unknown protein [Arabidopsis thaliana]
gi|14190439|gb|AAK55700.1|AF378897_1 At1g54500/F20D21_31 [Arabidopsis thaliana]
gi|15450567|gb|AAK96461.1| At1g54500/F20D21_31 [Arabidopsis thaliana]
gi|21554009|gb|AAM63090.1| rubredoxin, putative [Arabidopsis thaliana]
gi|332194989|gb|AEE33110.1| rubredoxin-like protein [Arabidopsis thaliana]
Length = 195
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CGY Y+E FD+LP+++ CP CGA + F
Sbjct: 94 VLNTGIYECRSCGYKYDESAGDPSYPIPPGFQFDKLPEDWRCPTCGAAQSFFE 146
>gi|307153437|ref|YP_003888821.1| rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7822]
gi|306983665|gb|ADN15546.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 7822]
Length = 53
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ YIC CGY Y+ + F+ +PD++ CPVCGA K F+
Sbjct: 2 KTYICTVCGYTYDPTQGDPDNNIAPGTAFEDIPDDWSCPVCGADKSEFQ 50
>gi|121606244|ref|YP_983573.1| rubredoxin-type Fe(Cys)4 protein [Polaromonas naphthalenivorans
CJ2]
gi|120595213|gb|ABM38652.1| Rubredoxin-type Fe(Cys)4 protein [Polaromonas naphthalenivorans
CJ2]
Length = 57
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
+ ++C CG+IY+E P+ Q+P N+ CP CGA K F
Sbjct: 1 MTQSMTWMCLICGWIYDEATGAPEHGIAAGTPWSQVPMNWTCPECGARKEDFE 53
>gi|428318109|ref|YP_007115991.1| Rubredoxin-type Fe(Cys)4 protein [Oscillatoria nigro-viridis PCC
7112]
gi|428241789|gb|AFZ07575.1| Rubredoxin-type Fe(Cys)4 protein [Oscillatoria nigro-viridis PCC
7112]
Length = 111
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 11/45 (24%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
CR CGY+Y +K F+ LP + CPVCGA K F+
Sbjct: 16 CRACGYVYEPKKGNPKIDIAPGTAFEDLPQTWVCPVCGARKSMFQ 60
>gi|186685601|ref|YP_001868797.1| rubredoxin-type Fe(Cys)4 protein [Nostoc punctiforme PCC 73102]
gi|186468053|gb|ACC83854.1| Rubredoxin-type Fe(Cys)4 protein [Nostoc punctiforme PCC 73102]
Length = 111
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
Y CR CGY+Y K F +LP N+ CPVC A K F PA T
Sbjct: 14 YECRACGYVYEPEKGDDKHDIPSGILFAELPTNWRCPVCSAKKTAFANIGPAGT 67
>gi|110597211|ref|ZP_01385499.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobium ferrooxidans DSM
13031]
gi|110341047|gb|EAT59515.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobium ferrooxidans DSM
13031]
Length = 58
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
+ ++C CGY+Y+ F+ +PD++ CPVCG K F P +
Sbjct: 2 EKWVCIPCGYVYDPEVGDPDSGIEPGTSFENIPDDWVCPVCGVDKTLFEPLS 53
>gi|404368616|ref|ZP_10973966.1| hypothetical protein FUAG_00264 [Fusobacterium ulcerans ATCC 49185]
gi|313687914|gb|EFS24749.1| hypothetical protein FUAG_00264 [Fusobacterium ulcerans ATCC 49185]
Length = 636
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 15/71 (21%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIY--------NERKP---FDQLPDNYF 102
+PP ++ + A PK + + + ++C CGY Y N+ KP F+ LP+ +
Sbjct: 567 APPMKK--MKRAIPK--KEIPTWKRHVCNGCGYEYDPAVGDEENDIKPGTLFEALPEEWI 622
Query: 103 CPVCGAPKRRF 113
CP+CG K F
Sbjct: 623 CPICGESKDMF 633
>gi|393789801|ref|ZP_10377920.1| rubredoxin [Bacteroides nordii CL02T12C05]
gi|392650204|gb|EIY43875.1| rubredoxin [Bacteroides nordii CL02T12C05]
Length = 54
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C YIY+ F+ +PD++ CP+CG K F Y
Sbjct: 2 KKYICTVCDYIYDPEMGDPDSGIEPGTAFEDIPDDWVCPLCGVGKEDFEEY 52
>gi|386813264|ref|ZP_10100488.1| putative rubredoxin [planctomycete KSU-1]
gi|386402761|dbj|GAB63369.1| putative rubredoxin [planctomycete KSU-1]
Length = 53
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
CR CGY+Y+ K F+ LPD++ CP CGA + F
Sbjct: 6 CRVCGYVYDPEKGDPDNGVKPGTSFENLPDDWICPSCGAGRDMF 49
>gi|297853408|ref|XP_002894585.1| rubredoxin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297340427|gb|EFH70844.1| rubredoxin family protein [Arabidopsis lyrata subsp. lyrata]
Length = 195
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
Y CR CGY Y+E FD+LP+++ CP CGA + F
Sbjct: 100 YECRSCGYKYDESAGDPSYPIPPGFQFDKLPEDWRCPTCGAAQSFFE 146
>gi|374995962|ref|YP_004971461.1| rubredoxin [Desulfosporosinus orientis DSM 765]
gi|357214328|gb|AET68946.1| rubredoxin [Desulfosporosinus orientis DSM 765]
Length = 53
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYVCSACGYIYDPEVGDPDSGIAPGTAFEDIPDDWVCPICGVGKDMF 49
>gi|386827863|ref|ZP_10114970.1| rubredoxin [Beggiatoa alba B18LD]
gi|386428747|gb|EIJ42575.1| rubredoxin [Beggiatoa alba B18LD]
Length = 511
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
Query: 75 SKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFR 114
+ +AYIC CG++Y E + +P ++ CPVCG K F
Sbjct: 456 NDEAYICLACGFVYKEAIGIPNAGIPAGTAWADMPSDWVCPVCGVMKTEFE 506
>gi|333987447|ref|YP_004520054.1| rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. SWAN-1]
gi|333825591|gb|AEG18253.1| Rubredoxin-type Fe(Cys)4 protein [Methanobacterium sp. SWAN-1]
Length = 53
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRF 113
Y C+ CGYIY+ E KP F++LP+++ CP CGA RF
Sbjct: 4 YKCKVCGYIYDPEVGEPRRETKPGTSFEELPEDWHCPQCGAGINRF 49
>gi|310780592|ref|YP_003968923.1| Rubredoxin-type Fe(Cys)4 protein [Ilyobacter polytropus DSM 2926]
gi|309749915|gb|ADO84575.1| Rubredoxin-type Fe(Cys)4 protein [Ilyobacter polytropus DSM 2926]
Length = 53
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRF 113
+ + C+ CGYIY+ + KP F+ L +++ CP+CGAPK F
Sbjct: 2 EKWRCKPCGYIYDPAVGDEAGDIKPGVKFEDLSEDWVCPLCGAPKEDF 49
>gi|385799931|ref|YP_005836335.1| rubredoxin-type Fe(Cys)4 protein [Halanaerobium praevalens DSM
2228]
gi|309389295|gb|ADO77175.1| Rubredoxin-type Fe(Cys)4 protein [Halanaerobium praevalens DSM
2228]
Length = 54
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPY 116
Q Y C C YIY+ E P F+ LP+++ CP CG K F PY
Sbjct: 2 QKYQCTVCMYIYDPEEGDPVGGIEAGTSFEDLPEDWVCPECGVGKDMFEPY 52
>gi|168181769|ref|ZP_02616433.1| rubredoxin [Clostridium botulinum Bf]
gi|237796535|ref|YP_002864087.1| rubredoxin [Clostridium botulinum Ba4 str. 657]
gi|182675133|gb|EDT87094.1| rubredoxin [Clostridium botulinum Bf]
gi|229262378|gb|ACQ53411.1| rubredoxin [Clostridium botulinum Ba4 str. 657]
Length = 52
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ + F+ +P+++ CP+CG PK F
Sbjct: 2 KKYLCEACGYIYDPEQGDPDNGVAPGTAFEDVPEDWVCPLCGLPKSEF 49
>gi|282165427|ref|YP_003357812.1| rubredoxin [Methanocella paludicola SANAE]
gi|282157741|dbj|BAI62829.1| rubredoxin [Methanocella paludicola SANAE]
Length = 54
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+ K PF+ LP+++ CPVCGA K +F
Sbjct: 6 CIPCGYIYDPAKGDPDGGVEPGTPFESLPEDWACPVCGASKDQF 49
>gi|345882869|ref|ZP_08834323.1| rubredoxin [Prevotella sp. C561]
gi|345044320|gb|EGW48361.1| rubredoxin [Prevotella sp. C561]
Length = 54
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ F+ +PD++ CP+CG K F P
Sbjct: 2 KKYECNTCGYIYDPEVGDPDSGIEPGTAFEDIPDDWVCPLCGVGKDDFSP 51
>gi|255527119|ref|ZP_05394006.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium carboxidivorans P7]
gi|296186593|ref|ZP_06854996.1| rubredoxin [Clostridium carboxidivorans P7]
gi|255509170|gb|EET85523.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium carboxidivorans P7]
gi|296049040|gb|EFG88471.1| rubredoxin [Clostridium carboxidivorans P7]
Length = 52
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY-----------NERKPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY N F+ +PD++ CP+CG K +F
Sbjct: 2 KQYVCSVCGYIYDPEQGDPDNGVNPGTAFENIPDSWVCPLCGVSKDQF 49
>gi|429759949|ref|ZP_19292443.1| rubredoxin [Veillonella atypica KON]
gi|429178821|gb|EKY20087.1| rubredoxin [Veillonella atypica KON]
Length = 50
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 77 QAYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+E F+ P +Y CP+CG K +F
Sbjct: 8 EKYVCVVCGWVYDEAVEGVKFEDQPADYVCPICGVGKDQF 47
>gi|55669895|pdb|1T9O|A Chain A, Crystal Structure Of V44g Cp Rubredoxin
gi|55669896|pdb|1T9O|B Chain B, Crystal Structure Of V44g Cp Rubredoxin
gi|55669897|pdb|1T9O|C Chain C, Crystal Structure Of V44g Cp Rubredoxin
Length = 54
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIYN F +PD++ CP+CG K +F
Sbjct: 2 KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGGGKDQF 49
>gi|348617896|ref|ZP_08884430.1| Rubredoxin (Rd) [Candidatus Glomeribacter gigasporarum BEG34]
gi|347816840|emb|CCD29084.1| Rubredoxin (Rd) [Candidatus Glomeribacter gigasporarum BEG34]
Length = 58
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFR 114
+ +IC CG+ Y+E K ++ LPD++ CP CGA K F
Sbjct: 6 KTWICLICGWCYDEEKGCTEEGIAPGTRWEDLPDDWVCPECGASKEDFE 54
>gi|294791662|ref|ZP_06756810.1| rubredoxin [Veillonella sp. 6_1_27]
gi|294793520|ref|ZP_06758657.1| rubredoxin [Veillonella sp. 3_1_44]
gi|294455090|gb|EFG23462.1| rubredoxin [Veillonella sp. 3_1_44]
gi|294456892|gb|EFG25254.1| rubredoxin [Veillonella sp. 6_1_27]
Length = 50
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 77 QAYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+E F+ P +Y CP+CG K +F
Sbjct: 8 EKYVCVVCGWVYDEAVEGVKFEDQPADYVCPICGVGKDQF 47
>gi|238019520|ref|ZP_04599946.1| hypothetical protein VEIDISOL_01389 [Veillonella dispar ATCC 17748]
gi|237864219|gb|EEP65509.1| hypothetical protein VEIDISOL_01389 [Veillonella dispar ATCC 17748]
Length = 50
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 77 QAYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+E F+ P +Y CP+CG K +F
Sbjct: 8 EKYVCVVCGWVYDEAVEGVKFEDQPADYVCPICGVGKDQF 47
>gi|269797754|ref|YP_003311654.1| rubredoxin-type Fe(Cys)4 protein [Veillonella parvula DSM 2008]
gi|282849028|ref|ZP_06258417.1| rubredoxin [Veillonella parvula ATCC 17745]
gi|303229626|ref|ZP_07316414.1| rubredoxin [Veillonella atypica ACS-134-V-Col7a]
gi|303231096|ref|ZP_07317836.1| rubredoxin [Veillonella atypica ACS-049-V-Sch6]
gi|401679495|ref|ZP_10811422.1| rubredoxin [Veillonella sp. ACP1]
gi|416998978|ref|ZP_11939647.1| rubredoxin [Veillonella parvula ACS-068-V-Sch12]
gi|269094383|gb|ACZ24374.1| Rubredoxin-type Fe(Cys)4 protein [Veillonella parvula DSM 2008]
gi|282581303|gb|EFB86697.1| rubredoxin [Veillonella parvula ATCC 17745]
gi|302514227|gb|EFL56229.1| rubredoxin [Veillonella atypica ACS-049-V-Sch6]
gi|302515751|gb|EFL57705.1| rubredoxin [Veillonella atypica ACS-134-V-Col7a]
gi|333977131|gb|EGL77990.1| rubredoxin [Veillonella parvula ACS-068-V-Sch12]
gi|400219429|gb|EJO50297.1| rubredoxin [Veillonella sp. ACP1]
Length = 44
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 77 QAYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+E F+ P +Y CP+CG K +F
Sbjct: 2 EKYVCVVCGWVYDEAVEGVKFEDQPADYVCPICGVGKDQF 41
>gi|194333903|ref|YP_002015763.1| rubredoxin-type Fe(Cys)4 protein [Prosthecochloris aestuarii DSM
271]
gi|194311721|gb|ACF46116.1| Rubredoxin-type Fe(Cys)4 protein [Prosthecochloris aestuarii DSM
271]
Length = 54
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
++C CGYIY+ PF+ +P+++ CPVCG K F
Sbjct: 4 WVCGPCGYIYDPEYGDPDNGIEPGTPFEDIPEDWVCPVCGVDKTLF 49
>gi|313900058|ref|ZP_07833558.1| rubredoxin [Clostridium sp. HGF2]
gi|346316225|ref|ZP_08857731.1| hypothetical protein HMPREF9022_03388 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|422326782|ref|ZP_16407810.1| hypothetical protein HMPREF0981_01130 [Erysipelotrichaceae
bacterium 6_1_45]
gi|312955110|gb|EFR36778.1| rubredoxin [Clostridium sp. HGF2]
gi|345903408|gb|EGX73173.1| hypothetical protein HMPREF9022_03388 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|371665069|gb|EHO30236.1| hypothetical protein HMPREF0981_01130 [Erysipelotrichaceae
bacterium 6_1_45]
Length = 207
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 66 APKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
AP + + + K + C CGYIY D LP +Y CP+CGAP F
Sbjct: 162 APSYQEK-SEKSGWRCTICGYIYEG----DPLPQDYVCPLCGAPAALFE 205
>gi|351720973|ref|NP_001237450.1| uncharacterized protein LOC100306607 [Glycine max]
gi|255629051|gb|ACU14870.1| unknown [Glycine max]
Length = 197
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CGY Y+E F++LPD++ CP CGA + F+
Sbjct: 96 VLNTGIYECRSCGYKYDEAVGDPSYPLPPGYQFEKLPDDWRCPTCGAAQSFFQ 148
>gi|153933589|ref|YP_001385401.1| rubredoxin [Clostridium botulinum A str. ATCC 19397]
gi|153936481|ref|YP_001388808.1| rubredoxin [Clostridium botulinum A str. Hall]
gi|153940794|ref|YP_001392357.1| rubredoxin [Clostridium botulinum F str. Langeland]
gi|170754287|ref|YP_001782714.1| rubredoxin [Clostridium botulinum B1 str. Okra]
gi|170759487|ref|YP_001788399.1| rubredoxin [Clostridium botulinum A3 str. Loch Maree]
gi|187778340|ref|ZP_02994813.1| hypothetical protein CLOSPO_01932 [Clostridium sporogenes ATCC
15579]
gi|226950508|ref|YP_002805599.1| rubredoxin [Clostridium botulinum A2 str. Kyoto]
gi|384463331|ref|YP_005675926.1| rubredoxin [Clostridium botulinum F str. 230613]
gi|387819336|ref|YP_005679683.1| rubredoxin [Clostridium botulinum H04402 065]
gi|424834775|ref|ZP_18259470.1| rubredoxin [Clostridium sporogenes PA 3679]
gi|429246560|ref|ZP_19209878.1| rubredoxin [Clostridium botulinum CFSAN001628]
gi|152929633|gb|ABS35133.1| rubredoxin [Clostridium botulinum A str. ATCC 19397]
gi|152932395|gb|ABS37894.1| rubredoxin [Clostridium botulinum A str. Hall]
gi|152936690|gb|ABS42188.1| rubredoxin [Clostridium botulinum F str. Langeland]
gi|169119499|gb|ACA43335.1| rubredoxin [Clostridium botulinum B1 str. Okra]
gi|169406476|gb|ACA54887.1| rubredoxin [Clostridium botulinum A3 str. Loch Maree]
gi|187771965|gb|EDU35767.1| rubredoxin [Clostridium sporogenes ATCC 15579]
gi|226841684|gb|ACO84350.1| rubredoxin [Clostridium botulinum A2 str. Kyoto]
gi|295320348|gb|ADG00726.1| rubredoxin [Clostridium botulinum F str. 230613]
gi|322807380|emb|CBZ04954.1| rubredoxin [Clostridium botulinum H04402 065]
gi|365978460|gb|EHN14538.1| rubredoxin [Clostridium sporogenes PA 3679]
gi|428756476|gb|EKX79030.1| rubredoxin [Clostridium botulinum CFSAN001628]
Length = 52
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ + F+ +P+++ CP+CG PK F
Sbjct: 2 KKYLCEACGYIYDPEQGDPDNGVAPGTAFENVPEDWVCPLCGLPKSEF 49
>gi|289577702|ref|YP_003476329.1| rubrerythrin [Thermoanaerobacter italicus Ab9]
gi|289527415|gb|ADD01767.1| Rubrerythrin [Thermoanaerobacter italicus Ab9]
Length = 167
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 48 SLHLLLSPPHQQQLLASAAPKFSMR---VASKQAYICRDCGYIYNERKPFDQLPDNYFCP 104
S+H + L + A + +++ + Q YIC CGY D LP+ CP
Sbjct: 103 SIHYAIEAEKIHAKLYTEAKEVALKGEDIKISQVYICPVCGYT-----SVDVLPEK--CP 155
Query: 105 VCGAPKRRF 113
VCG PK +F
Sbjct: 156 VCGVPKEKF 164
>gi|119357126|ref|YP_911770.1| rubredoxin-type Fe(Cys)4 protein [Chlorobium phaeobacteroides DSM
266]
gi|119354475|gb|ABL65346.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobium phaeobacteroides DSM
266]
Length = 58
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 71 MRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
M S A+ C +CGY+Y+ + PF+ +PD + CPVC KR F
Sbjct: 1 MSKQSLPAFRCEECGYVYDPLEGDPDSHIPPGAPFETVPDEWCCPVCNMSKRTF 54
>gi|414078849|ref|YP_006998167.1| rubredoxin [Anabaena sp. 90]
gi|413972265|gb|AFW96354.1| rubredoxin [Anabaena sp. 90]
Length = 114
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
Y CR CGY+Y K F +LP N+ CPVC A K F PA T
Sbjct: 17 YECRSCGYVYEPEKGDDKSDVPPGTLFAELPTNWRCPVCVAKKTVFANIGPAGT 70
>gi|421555064|ref|ZP_16001003.1| rubredoxin [Neisseria meningitidis 98008]
gi|421558929|ref|ZP_16004805.1| rubredoxin [Neisseria meningitidis 92045]
gi|402332217|gb|EJU67548.1| rubredoxin [Neisseria meningitidis 98008]
gi|402336854|gb|EJU72110.1| rubredoxin [Neisseria meningitidis 92045]
Length = 56
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRF 113
Y+C CG+IY+E R F+ +PD++ CP CG K F
Sbjct: 4 YMCGPCGWIYDEEHGDPEHGIPPRTKFEDIPDDWKCPECGVGKEDF 49
>gi|381167385|ref|ZP_09876593.1| putative rubredoxin [Phaeospirillum molischianum DSM 120]
gi|380683693|emb|CCG41405.1| putative rubredoxin [Phaeospirillum molischianum DSM 120]
Length = 70
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
++C CG++Y+ + PF+ LP+++ CP CGAP F
Sbjct: 23 WVCNRCGHVYSPGEGEPLQDIPPGVPFEHLPEDWLCPHCGAPHSLF 68
>gi|242277567|ref|YP_002989696.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio salexigens DSM
2638]
gi|242120461|gb|ACS78157.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio salexigens DSM
2638]
Length = 52
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
Y+C CG++Y+ E P F+ +P+++ CPVCGA K F P
Sbjct: 3 YVCTICGWVYDPAEGDPDGGIAPGTKFEDIPEDWECPVCGAGKDDFEP 50
>gi|389581314|ref|ZP_10171341.1| rubredoxin [Desulfobacter postgatei 2ac9]
gi|389402949|gb|EIM65171.1| rubredoxin [Desulfobacter postgatei 2ac9]
Length = 52
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ + F LP+++ CPVCGA K F
Sbjct: 4 YVCGPCGYVYDPAEGDADGGIDPGTAFKDLPEDWVCPVCGASKDEF 49
>gi|288925633|ref|ZP_06419565.1| rubredoxin [Prevotella buccae D17]
gi|315606415|ref|ZP_07881430.1| rubredoxin [Prevotella buccae ATCC 33574]
gi|402308718|ref|ZP_10827722.1| rubredoxin [Prevotella sp. MSX73]
gi|288337571|gb|EFC75925.1| rubredoxin [Prevotella buccae D17]
gi|315251821|gb|EFU31795.1| rubredoxin [Prevotella buccae ATCC 33574]
gi|400375169|gb|EJP28079.1| rubredoxin [Prevotella sp. MSX73]
Length = 54
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ F+ +PD++ CP CG K F
Sbjct: 2 KKYVCDVCGYIYDPELGDPDGGIAPGTAFEDIPDDWVCPTCGVTKEDF 49
>gi|117923598|ref|YP_864215.1| rubredoxin-type Fe(Cys)4 protein [Magnetococcus marinus MC-1]
gi|117607354|gb|ABK42809.1| Rubredoxin-type Fe(Cys)4 protein [Magnetococcus marinus MC-1]
Length = 73
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 13/72 (18%)
Query: 78 AYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAND 126
+ C C Y Y+E FD LP ++ CPVCG K F+ + + RG +
Sbjct: 3 VWCCMSCEYEYDEEVGSTATGIVAGTDFDTLPKDWRCPVCGLSKEHFQ--SEDMLRGESP 60
Query: 127 TAVRKARKEQIQ 138
+ A E+I+
Sbjct: 61 IELADADDEEIE 72
>gi|405984408|ref|ZP_11042711.1| hypothetical protein HMPREF9451_01843 [Slackia piriformis YIT
12062]
gi|404388240|gb|EJZ83324.1| hypothetical protein HMPREF9451_01843 [Slackia piriformis YIT
12062]
Length = 224
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
A+ C CG+I + D+LPD++ CPVCG K F
Sbjct: 188 AWRCTICGHI----EYVDELPDDFVCPVCGVGKELFE 220
>gi|357512209|ref|XP_003626393.1| Rubredoxin [Medicago truncatula]
gi|355501408|gb|AES82611.1| Rubredoxin [Medicago truncatula]
gi|388519141|gb|AFK47632.1| unknown [Medicago truncatula]
Length = 183
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CGY Y+E F++LPD++ CP CGA + F
Sbjct: 82 VLNTGIYECRSCGYKYDEGVGDPSYPIPPGYQFEKLPDDWRCPTCGAAQSFFE 134
>gi|296133487|ref|YP_003640734.1| flavin reductase domain-containing FMN-binding protein [Thermincola
potens JR]
gi|296032065|gb|ADG82833.1| flavin reductase domain protein FMN-binding protein [Thermincola
potens JR]
Length = 234
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 72 RVASKQAYICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRFR 114
R Y C CGYIY+ KP F +PD++ CPVCG K +F
Sbjct: 177 RATGNDKYRCMVCGYIYDPASGDPDSGIKPGTSFADIPDDWVCPVCGVGKDQFE 230
>gi|284048908|ref|YP_003399247.1| acyl-CoA dehydrogenase [Acidaminococcus fermentans DSM 20731]
gi|283953129|gb|ADB47932.1| acyl-CoA dehydrogenase domain protein [Acidaminococcus fermentans
DSM 20731]
Length = 635
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRFRP 115
Y+C+ CGY YN + KP F LP+++ CP+C + K F P
Sbjct: 586 YVCKGCGYEYNPDLGDPDADVKPGTKFQDLPEDWVCPLCNSAKTEFVP 633
>gi|157830284|pdb|1BFY|A Chain A, Solution Structure Of Reduced Clostridium Pasteurianum
Rubredoxin, Nmr, 20 Structures
Length = 54
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIYN F +PD++ CP+CG K +F
Sbjct: 2 KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQF 49
>gi|325846924|ref|ZP_08169781.1| rubredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481166|gb|EGC84210.1| rubredoxin [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 52
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ F+ LP+++ CPVCG K F
Sbjct: 3 YVCTACGYIYDPANGDPDNGIDAGTEFNDLPEDWVCPVCGVGKDMF 48
>gi|440784935|ref|ZP_20961972.1| Rubredoxin [Clostridium pasteurianum DSM 525]
gi|134108|sp|P00268.2|RUBR_CLOPA RecName: Full=Rubredoxin; Short=Rd
gi|13787054|pdb|1FHH|A Chain A, X-Ray Crystal Structure Of Oxidized Rubredoxin
gi|13787055|pdb|1FHM|A Chain A, X-Ray Crystal Structure Of Reduced Rubredoxin
gi|46015389|pdb|1R0F|A Chain A, Gallium-Substituted Rubredoxin
gi|46015390|pdb|1R0G|A Chain A, Mercury-Substituted Rubredoxin
gi|46015391|pdb|1R0H|A Chain A, Cobalt-Substituted Rubredoxin
gi|46015392|pdb|1R0I|A Chain A, Cadmium-Substituted Rubredoxin
gi|46015393|pdb|1R0J|A Chain A, Nickel-Substituted Rubredoxin
gi|157831494|pdb|1IRN|A Chain A, Rubredoxin (zn-substituted) At 1.2 Angstroms Resolution
gi|157831495|pdb|1IRO|A Chain A, Rubredoxin (Oxidized, Fe(Iii)) At 1.1 Angstroms Resolution
gi|144909|gb|AAA23279.1| rubredoxin [Clostridium pasteurianum]
gi|440218585|gb|ELP57804.1| Rubredoxin [Clostridium pasteurianum DSM 525]
Length = 54
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIYN F +PD++ CP+CG K +F
Sbjct: 2 KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQF 49
>gi|114798556|ref|YP_759300.1| rubredoxin [Hyphomonas neptunium ATCC 15444]
gi|114738730|gb|ABI76855.1| rubredoxin [Hyphomonas neptunium ATCC 15444]
Length = 58
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ + CR CGY+Y E+ + +PD++ CP+CG PK F
Sbjct: 6 KTWQCRTCGYLYEEKLGDPGEGLAPGTRWADIPDDWICPLCGTPKSDF 53
>gi|217071200|gb|ACJ83960.1| unknown [Medicago truncatula]
Length = 183
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFR 114
V + Y CR CGY Y+E F++LPD++ CP CGA + F
Sbjct: 82 VLNTGIYECRSCGYKYDEGVGDPSYPIPPGYQFEKLPDDWRCPTCGAAQSFFE 134
>gi|18977655|ref|NP_579012.1| rubrerythrin [Pyrococcus furiosus DSM 3638]
gi|397651778|ref|YP_006492359.1| rubrerythrin [Pyrococcus furiosus COM1]
gi|46014937|pdb|1NNQ|A Chain A, Rubrerythrin From Pyrococcus Furiosus Pfu-1210814
gi|46014938|pdb|1NNQ|B Chain B, Rubrerythrin From Pyrococcus Furiosus Pfu-1210814
gi|118137966|pdb|2HR5|A Chain A, Pf1283- Rubrerythrin From Pyrococcus Furiosus Iron Bound
Form
gi|118137967|pdb|2HR5|B Chain B, Pf1283- Rubrerythrin From Pyrococcus Furiosus Iron Bound
Form
gi|6066242|gb|AAF03227.1|AF156097_7 rubrerythrin [Pyrococcus furiosus]
gi|18893381|gb|AAL81407.1| rubrerythrin [Pyrococcus furiosus DSM 3638]
gi|393189369|gb|AFN04067.1| rubrerythrin [Pyrococcus furiosus COM1]
Length = 171
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ K+ YIC CGY D+ P+ +CPVCGAPK +F
Sbjct: 134 IEIKKVYICPICGYT-----AVDEAPE--YCPVCGAPKEKF 167
>gi|359399575|ref|ZP_09192576.1| Rubredoxin-type Fe(Cys)4 protein [Novosphingobium pentaromativorans
US6-1]
gi|357599036|gb|EHJ60753.1| Rubredoxin-type Fe(Cys)4 protein [Novosphingobium pentaromativorans
US6-1]
Length = 66
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 75 SKQAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
Q ++C CGYIY+ E P F+ LPD++ CP C K F P
Sbjct: 13 ENQQWVCMYCGYIYDPAEGDPAGGIPPGTAFEDLPDDWCCPNCSTEKDTFEP 64
>gi|325294440|ref|YP_004280954.1| rubredoxin-type Fe(Cys)4 protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064888|gb|ADY72895.1| Rubredoxin-type Fe(Cys)4 protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 59
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Query: 71 MRVASKQAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
M + + C CGYIY+ E P F+ +PD++ CP+CG K +F P
Sbjct: 1 MEEKQYKLWRCTVCGYIYDVDEGDPDNNVPPGTSFEAIPDDWVCPICGVTKDKFEP 56
>gi|121998792|ref|YP_001003579.1| rubredoxin-type Fe(Cys)4 protein [Halorhodospira halophila SL1]
gi|121590197|gb|ABM62777.1| Rubredoxin-type Fe(Cys)4 protein [Halorhodospira halophila SL1]
Length = 56
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 75 SKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+++ ++C CG++Y+E + PF+ LP+ + CP C A K F
Sbjct: 2 AERVWVCTVCGWMYDESQGVPEQGIEPGTPFEDLPEEFLCPECSAGKEAF 51
>gi|442806005|ref|YP_007374154.1| rubredoxin [Clostridium stercorarium subsp. stercorarium DSM 8532]
gi|442741855|gb|AGC69544.1| rubredoxin [Clostridium stercorarium subsp. stercorarium DSM 8532]
Length = 73
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 11/58 (18%)
Query: 68 KFSMRVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFR 114
K R + ++C CGY+Y+ PF+ LPD++ CP CG K F
Sbjct: 14 KVVERGVFMEKWVCTVCGYVYDPEVGDPEHGIAPGTPFEDLPDDWVCPDCGVGKDMFE 71
>gi|340707615|pdb|3MPS|A Chain A, Peroxide Bound Oxidized Rubrerythrin From Pyrococcus
Furiosus
gi|340707616|pdb|3MPS|B Chain B, Peroxide Bound Oxidized Rubrerythrin From Pyrococcus
Furiosus
gi|340707617|pdb|3MPS|D Chain D, Peroxide Bound Oxidized Rubrerythrin From Pyrococcus
Furiosus
gi|340707618|pdb|3MPS|F Chain F, Peroxide Bound Oxidized Rubrerythrin From Pyrococcus
Furiosus
gi|340707619|pdb|3MPS|G Chain G, Peroxide Bound Oxidized Rubrerythrin From Pyrococcus
Furiosus
gi|340707620|pdb|3MPS|H Chain H, Peroxide Bound Oxidized Rubrerythrin From Pyrococcus
Furiosus
gi|340707621|pdb|3MPS|I Chain I, Peroxide Bound Oxidized Rubrerythrin From Pyrococcus
Furiosus
gi|340707622|pdb|3MPS|K Chain K, Peroxide Bound Oxidized Rubrerythrin From Pyrococcus
Furiosus
gi|340707812|pdb|3PWF|A Chain A, High Resolution Structure Of The Fully Reduced Form Of
Rubrerythrin From P. Furiosus
gi|340707813|pdb|3PWF|B Chain B, High Resolution Structure Of The Fully Reduced Form Of
Rubrerythrin From P. Furiosus
gi|340707816|pdb|3PZA|A Chain A, Fully Reduced (All-Ferrous) Pyrococcus Rubrerythrin After
A 10 Second Exposure To Peroxide.
gi|340707817|pdb|3PZA|B Chain B, Fully Reduced (All-Ferrous) Pyrococcus Rubrerythrin After
A 10 Second Exposure To Peroxide.
gi|340707942|pdb|3QVD|A Chain A, Exposure Of Rubrerythrin From Pyrococcus Furiosus To
Peroxide, Fifteen Second Time Point.
gi|340707943|pdb|3QVD|B Chain B, Exposure Of Rubrerythrin From Pyrococcus Furiosus To
Peroxide, Fifteen Second Time Point.
gi|340707944|pdb|3QVD|C Chain C, Exposure Of Rubrerythrin From Pyrococcus Furiosus To
Peroxide, Fifteen Second Time Point.
gi|340707945|pdb|3QVD|D Chain D, Exposure Of Rubrerythrin From Pyrococcus Furiosus To
Peroxide, Fifteen Second Time Point.
gi|340707946|pdb|3QVD|E Chain E, Exposure Of Rubrerythrin From Pyrococcus Furiosus To
Peroxide, Fifteen Second Time Point.
gi|340707947|pdb|3QVD|F Chain F, Exposure Of Rubrerythrin From Pyrococcus Furiosus To
Peroxide, Fifteen Second Time Point.
gi|340707948|pdb|3QVD|G Chain G, Exposure Of Rubrerythrin From Pyrococcus Furiosus To
Peroxide, Fifteen Second Time Point.
gi|340707949|pdb|3QVD|H Chain H, Exposure Of Rubrerythrin From Pyrococcus Furiosus To
Peroxide, Fifteen Second Time Point
Length = 170
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ K+ YIC CGY D+ P+ +CPVCGAPK +F
Sbjct: 133 IEIKKVYICPICGYT-----AVDEAPE--YCPVCGAPKEKF 166
>gi|167036921|ref|YP_001664499.1| rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115340|ref|YP_004185499.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|326391708|ref|ZP_08213232.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter ethanolicus JW
200]
gi|392939478|ref|ZP_10305122.1| rubredoxin [Thermoanaerobacter siderophilus SR4]
gi|166855755|gb|ABY94163.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928431|gb|ADV79116.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|325992248|gb|EGD50716.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter ethanolicus JW
200]
gi|392291228|gb|EIV99671.1| rubredoxin [Thermoanaerobacter siderophilus SR4]
Length = 52
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ + C CGYIY+ + PF++LPD++ CP CG K F
Sbjct: 2 EKWQCTVCGYIYDPEEGDPSQGIEPGTPFEELPDDWVCPDCGVGKDMF 49
>gi|84489256|ref|YP_447488.1| rubredoxin [Methanosphaera stadtmanae DSM 3091]
gi|84372575|gb|ABC56845.1| rubredoxin [Methanosphaera stadtmanae DSM 3091]
Length = 53
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CG++YN F+ LPD++ CP CG+ K FRP
Sbjct: 2 KQYKCLLCGWVYNPENGDKTQNIPPGTAFEDLPDDWTCPYCGSDKTMFRP 51
>gi|282881264|ref|ZP_06289950.1| rubredoxin [Prevotella timonensis CRIS 5C-B1]
gi|281304854|gb|EFA96928.1| rubredoxin [Prevotella timonensis CRIS 5C-B1]
Length = 54
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ + F+ LP+++ CP+CG K F
Sbjct: 2 KKYVCETCGYVYDPAQGDPDSGIEPGTAFEDLPEDWVCPLCGVGKEDF 49
>gi|95931209|ref|ZP_01313930.1| Rubredoxin-type Fe(Cys)4 protein [Desulfuromonas acetoxidans DSM
684]
gi|95132728|gb|EAT14406.1| Rubredoxin-type Fe(Cys)4 protein [Desulfuromonas acetoxidans DSM
684]
Length = 54
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRPYT 117
+ Y+C CGY+Y+ E P F +PD++ CPVCG K F T
Sbjct: 2 EKYVCTACGYVYDPAEGDPDSGIDPGTAFADIPDDWVCPVCGVSKDMFELVT 53
>gi|238916017|ref|YP_002929534.1| ferredoxin hydrogenase [Eubacterium eligens ATCC 27750]
gi|238871377|gb|ACR71087.1| ferredoxin hydrogenase [Eubacterium eligens ATCC 27750]
Length = 181
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAND-TAVRKARKEQI 137
Y+C CGY+Y + LP ++ CPVC AP +F T A V K E I
Sbjct: 3 YVCTVCGYVYE----GESLPADFVCPVCKAPASKFAAQTGEREWAAEHVVGVAKGVSEDI 58
Query: 138 QRD 140
D
Sbjct: 59 VAD 61
>gi|434406501|ref|YP_007149386.1| rubredoxin [Cylindrospermum stagnale PCC 7417]
gi|428260756|gb|AFZ26706.1| rubredoxin [Cylindrospermum stagnale PCC 7417]
Length = 53
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
YIC CGY Y F+ +PD++ CPVCGA K F
Sbjct: 4 YICTVCGYEYEPEIGDPDSGIEPGTAFEDIPDDWVCPVCGAAKEDF 49
>gi|311745159|ref|ZP_07718944.1| putative rubredoxin [Algoriphagus sp. PR1]
gi|126577679|gb|EAZ81899.1| putative rubredoxin [Algoriphagus sp. PR1]
Length = 480
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRF 113
+AY C++C IY+ FD LP +Y CPVC APK F
Sbjct: 423 EAYQCKNCLTIYDPIYGDHTQNIPAETSFDDLPIDYLCPVCDAPKADF 470
>gi|427734529|ref|YP_007054073.1| rubredoxin [Rivularia sp. PCC 7116]
gi|427369570|gb|AFY53526.1| rubredoxin [Rivularia sp. PCC 7116]
Length = 114
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
Y CR CGY+Y K F +LP + CPVC A K+ F PA T
Sbjct: 17 YECRACGYVYEPEKGDDSHNIPANTAFAELPITWRCPVCTAKKKAFENVGPAGT 70
>gi|218887567|ref|YP_002436888.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|347733535|ref|ZP_08866592.1| rubredoxin [Desulfovibrio sp. A2]
gi|134115|sp|P15412.1|RUBR_DESVM RecName: Full=Rubredoxin; Short=Rd
gi|5107733|pdb|2RDV|A Chain A, Rubredoxin From Desulfovibrio Vulgaris Miyazaki F,
Monoclinic Crystal Form
gi|5107734|pdb|2RDV|B Chain B, Rubredoxin From Desulfovibrio Vulgaris Miyazaki F,
Monoclinic Crystal Form
gi|5107735|pdb|2RDV|C Chain C, Rubredoxin From Desulfovibrio Vulgaris Miyazaki F,
Monoclinic Crystal Form
gi|157833665|pdb|1RDV|A Chain A, Rubredoxin From Desulfovibrio Vulgaris Miyazaki F,
Trigonal Crystal Form
gi|1020404|dbj|BAA11175.1| rubredoxin [Desulfovibrio vulgaris]
gi|218758521|gb|ACL09420.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|347517769|gb|EGY24957.1| rubredoxin [Desulfovibrio sp. A2]
gi|226794|prf||1606208A rubredoxin
Length = 52
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGY Y N KP F+ +P ++ CP+CGAPK F P
Sbjct: 2 KKYVCTVCGYEYDPAEGDPDNGVKPGTAFEDVPADWVCPICGAPKSEFEP 51
>gi|383810422|ref|ZP_09965916.1| rubredoxin [Prevotella sp. oral taxon 306 str. F0472]
gi|383356790|gb|EID34280.1| rubredoxin [Prevotella sp. oral taxon 306 str. F0472]
Length = 54
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ F+ +PD++ CP+CG K F P
Sbjct: 2 KKYECETCGYIYDPEVGDPDSGIAPGTAFEDIPDDWVCPLCGVGKDDFSP 51
>gi|302386023|ref|YP_003821845.1| rubredoxin-type Fe(Cys)4 protein [Clostridium saccharolyticum WM1]
gi|302196651|gb|ADL04222.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium saccharolyticum WM1]
Length = 52
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ F+ LP+++ CPVCG K F
Sbjct: 4 YVCEPCGYVYDPEIGDPDSGIEPGTAFEDLPEDWVCPVCGVGKDMF 49
>gi|312135242|ref|YP_004002580.1| rubredoxin-type fe(cys)4 protein [Caldicellulosiruptor owensensis
OL]
gi|311775293|gb|ADQ04780.1| Rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor owensensis
OL]
Length = 52
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ +IC CGY YN F+ LPD++ CPVCG K F
Sbjct: 2 EIWICSICGYEYNPENGDPENGIEPGTKFEDLPDDWVCPVCGVGKDMF 49
>gi|255523671|ref|ZP_05390638.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium carboxidivorans P7]
gi|255512726|gb|EET88999.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium carboxidivorans P7]
Length = 53
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Q Y+C CGYIY+ + F+ +P+++ CP+CG K +F
Sbjct: 2 QKYVCVVCGYIYDPEQGDPDNGVAPGTSFEGIPEDWVCPLCGVGKDQF 49
>gi|352684005|ref|YP_004895989.1| rubrerythrin [Acidaminococcus intestini RyC-MR95]
gi|350278659|gb|AEQ21849.1| rubrerythrin [Acidaminococcus intestini RyC-MR95]
Length = 179
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 7 TRALSTTNSSTPPPLLAPTGN--NAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLAS 64
R+L ++ + A + AGL AD A+ + L + L+
Sbjct: 76 VRSLQKVEAAGEEKIKAISDEFRAAGLSEAADEMAVFARQEGGHGFRL------EALINR 129
Query: 65 AAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
AP+ V ++ Y C CGY Y + PD+Y CP+CG PK+ F
Sbjct: 130 FAPE-ETSVEGRKVYRCPVCGYEYV--GDLESEPDDYVCPLCGQPKKAF 175
>gi|319942751|ref|ZP_08017056.1| rubredoxin [Sutterella wadsworthensis 3_1_45B]
gi|319803693|gb|EFW00637.1| rubredoxin [Sutterella wadsworthensis 3_1_45B]
Length = 107
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 11/55 (20%)
Query: 72 RVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
RV + C+ C Y+YN + PF LPD++ CP CG PK F P
Sbjct: 28 RVGAHTRMQCKVCWYVYNPDEGCPEEAIDPGTPFLDLPDDFVCPDCGHPKTAFLP 82
>gi|256830282|ref|YP_003159010.1| rubredoxin-type Fe(Cys)4 protein [Desulfomicrobium baculatum DSM
4028]
gi|256579458|gb|ACU90594.1| Rubredoxin-type Fe(Cys)4 protein [Desulfomicrobium baculatum DSM
4028]
Length = 53
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ F+ +PD++ CPVCGA K F
Sbjct: 4 YVCTLCGYVYDPASGDPDNGVAPGTKFEDIPDDWTCPVCGAGKEDF 49
>gi|410659376|ref|YP_006911747.1| Rubredoxin [Dehalobacter sp. DCA]
gi|410662362|ref|YP_006914733.1| Rubredoxin [Dehalobacter sp. CF]
gi|409021731|gb|AFV03762.1| Rubredoxin [Dehalobacter sp. DCA]
gi|409024718|gb|AFV06748.1| Rubredoxin [Dehalobacter sp. CF]
Length = 54
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
Q Y C CGY+Y+ E P F+ LPD++ CP+CGA K F
Sbjct: 2 QKYECTVCGYVYDPAEGDPDARIAPGTAFEDLPDDWVCPLCGAAKDEF 49
>gi|330997150|ref|ZP_08321003.1| rubredoxin [Paraprevotella xylaniphila YIT 11841]
gi|329570945|gb|EGG52652.1| rubredoxin [Paraprevotella xylaniphila YIT 11841]
Length = 54
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C ++Y+ F+ +P+++ CPVCG K F PY
Sbjct: 2 KKYICTVCQWVYDPEVGDPESGIEPGTAFENIPEDWVCPVCGVGKDDFEPY 52
>gi|289450470|ref|YP_003475014.1| rubredoxin [Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289185017|gb|ADC91442.1| rubredoxin [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 53
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ F LP+++ CP+CGA K +F
Sbjct: 4 YVCDLCGYIYDPEVGDEDNGIEPGTAFADLPEDWLCPLCGAAKDQF 49
>gi|32394570|gb|AAM93983.1| rubredoxin [Griffithsia japonica]
Length = 187
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 18/115 (15%)
Query: 15 SSTPPPLLAPTGNNAGLRRP-ADRFALKSSFSAPSLHLLLSPPHQQQLLA----SAAPKF 69
+S+P + ++ + P +D A S S PS+ + P ++ AA KF
Sbjct: 24 TSSPTTDATTSAESSTTKNPTSDPLARDDSLSPPSVEAIAKDPRSERQKEIDRLRAAEKF 83
Query: 70 SMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
K + C CGY+Y K F L D++ CP C PKRRF
Sbjct: 84 VTIDEGK--FECTACGYVYEPSKGELRSNIAPGTAFADLSDSFTCPQCRTPKRRF 136
>gi|332881465|ref|ZP_08449114.1| rubredoxin [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357045540|ref|ZP_09107175.1| rubredoxin [Paraprevotella clara YIT 11840]
gi|332680463|gb|EGJ53411.1| rubredoxin [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355531402|gb|EHH00800.1| rubredoxin [Paraprevotella clara YIT 11840]
Length = 54
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C ++Y+ F+ +P+++ CPVCG K F PY
Sbjct: 2 KKYICTVCQWVYDPEVGDPESGIEPGTAFEDIPEDWVCPVCGVGKDDFEPY 52
>gi|392426423|ref|YP_006467417.1| rubredoxin [Desulfosporosinus acidiphilus SJ4]
gi|391356386|gb|AFM42085.1| rubredoxin [Desulfosporosinus acidiphilus SJ4]
Length = 53
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ + F+ +PD++ CP+CG K F
Sbjct: 2 KKYVCSACGYVYDPQLGDPDSGIEPGTAFEDIPDDWVCPLCGVAKSEF 49
>gi|282901526|ref|ZP_06309448.1| Rubredoxin-type Fe(Cys)4 protein [Cylindrospermopsis raciborskii
CS-505]
gi|281193569|gb|EFA68544.1| Rubredoxin-type Fe(Cys)4 protein [Cylindrospermopsis raciborskii
CS-505]
Length = 114
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 37/99 (37%), Gaps = 22/99 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDT 127
Y CR CGY+Y K F LP N+ CPVC A K F P T
Sbjct: 17 YECRACGYVYEPEKGDDKYNIPAGTAFADLPTNWKCPVCSAKKVAFANIGP--------T 68
Query: 128 AVRKARKEQIQRDEAIGKALPI---AIAVAAVALAGLYF 163
KE + + + P + A+AL L+F
Sbjct: 69 GTASGFKENLGYGLGVNQLTPTQKNILIFGALALGFLFF 107
>gi|37683582|gb|AAQ98841.1| rubredoxin [Rhodococcus sp. NCIMB12038]
gi|37912025|gb|AAR05110.1| rubredoxin [Rhodococcus sp. P200]
Length = 86
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPA 119
+ ++C C +Y+ R F +PD++ CPVCGA K+ FR P
Sbjct: 17 ELWVCEVCEDVYDPRLGDPEGGISPGTAFQDIPDDWVCPVCGARKKEFRKLRPG 70
>gi|431793504|ref|YP_007220409.1| succinate dehydrogenase/fumarate reductase flavoprotein subunit
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430783730|gb|AGA69013.1| succinate dehydrogenase/fumarate reductase flavoprotein subunit
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 590
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 17/63 (26%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQ 138
+IC+ CGYI+ +P ++ CP CGAPK FR N++AV +QIQ
Sbjct: 4 WICKVCGYIHTGNEPPER------CPQCGAPKEEFRLLE------ENESAV-----DQIQ 46
Query: 139 RDE 141
D+
Sbjct: 47 SDQ 49
>gi|288802424|ref|ZP_06407863.1| rubredoxin [Prevotella melaninogenica D18]
gi|288334952|gb|EFC73388.1| rubredoxin [Prevotella melaninogenica D18]
Length = 54
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ F+ +PD++ CP+CG K F P
Sbjct: 2 KKYECETCGYIYDPELGDPDSGIAPGTAFEDIPDDWVCPLCGVGKDDFTP 51
>gi|158321193|ref|YP_001513700.1| rubredoxin-type Fe(Cys)4 protein [Alkaliphilus oremlandii OhILAs]
gi|158141392|gb|ABW19704.1| Rubredoxin-type Fe(Cys)4 protein [Alkaliphilus oremlandii OhILAs]
Length = 52
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Y+C CGY+Y+ F+ +P+++ CPVCG K F P
Sbjct: 3 YVCIPCGYVYDPEVGDPDGGIAPGTAFEDIPEDWVCPVCGVSKDMFEP 50
>gi|197103636|ref|YP_002129013.1| rubredoxin [Phenylobacterium zucineum HLK1]
gi|196477056|gb|ACG76584.1| rubredoxin [Phenylobacterium zucineum HLK1]
Length = 64
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
+ + CR CGY+Y+E + LPD++ CP+CG PK F
Sbjct: 12 KTWQCRTCGYLYSEADGDPGEGLAPGTRWSDLPDDWRCPLCGTPKSDF 59
>gi|188996778|ref|YP_001931029.1| Rubredoxin-type Fe(Cys)4 protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931845|gb|ACD66475.1| Rubredoxin-type Fe(Cys)4 protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 63
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 68 KFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
K +++ Y CR CGY+Y+ K F LPD + CPVC K+ FR
Sbjct: 2 KVNLKEEKNLKYRCRVCGYVYDPEKGDEINLISPGVEFVDLPDTWRCPVCNYSKKEFR 59
>gi|298709740|emb|CBJ31543.1| Rubredoxin [Ectocarpus siliculosus]
Length = 230
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Query: 81 CRDCGYIYNERKP---------FDQLPDNYFCPVCGAPKRRFRPYTPAVTRGANDTA 128
C CG++Y FD LP + CPVC APK F T + G D A
Sbjct: 139 CLQCGFVYKPENAGQGALPGTQFDDLPSTWICPVCKAPKDTFFAQTKTIA-GFEDNA 194
>gi|340759150|ref|ZP_08695725.1| rubredoxin-type Fe(Cys)4 protein [Fusobacterium varium ATCC 27725]
gi|251835709|gb|EES64247.1| rubredoxin-type Fe(Cys)4 protein [Fusobacterium varium ATCC 27725]
Length = 113
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPY 116
+ ++C CGY+Y+ F+ LPDN+ CP CGA K FR +
Sbjct: 61 EKFMCEVCGYVYDPAVGDVDHGIKAGTSFNDLPDNWTCPPCGADKHAFRKF 111
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRF 113
+ YIC CGY+Y+ F+ LPD++ CP CGA K F
Sbjct: 2 KKYICEVCGYVYDPAVGDVDHGIKAGTSFNDLPDDWTCPPCGADKHAF 49
>gi|227824991|ref|ZP_03989823.1| rubrerythrin [Acidaminococcus sp. D21]
gi|226905490|gb|EEH91408.1| rubrerythrin [Acidaminococcus sp. D21]
Length = 181
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 7 TRALSTTNSSTPPPLLAPTGN--NAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLAS 64
R+L ++ + A + AGL AD A+ + L + L+
Sbjct: 78 VRSLQKVEAAGEEKIKAISDEFRAAGLSEAADEMAVFARQEGGHGFRL------EALINR 131
Query: 65 AAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
AP+ V ++ Y C CGY Y + PD+Y CP+CG PK+ F
Sbjct: 132 FAPE-ETSVEGRKVYRCPVCGYEYV--GDLESEPDDYVCPLCGQPKKAF 177
>gi|206889891|ref|YP_002249444.1| rubredoxin [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206890156|ref|YP_002249394.1| rubredoxin [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741829|gb|ACI20886.1| rubredoxin [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742094|gb|ACI21151.1| rubredoxin [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 53
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGY+Y+ + F+ LPD + CPVCGA K F P
Sbjct: 2 KKYKCSVCGYVYDPAQGDPDNGVAPGTAFENLPDTWSCPVCGATKDMFEP 51
>gi|365135014|ref|ZP_09343573.1| rubredoxin [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613341|gb|EHL64859.1| rubredoxin [Subdoligranulum sp. 4_3_54A2FAA]
Length = 52
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+E ++ +P+++ CPVCG K +F
Sbjct: 2 KKYVCTVCGYIYDEAAGDPDNGVEPGTKWEDVPEDWVCPVCGVGKDQF 49
>gi|265767425|ref|ZP_06095091.1| rubredoxin [Bacteroides sp. 2_1_16]
gi|263252730|gb|EEZ24242.1| rubredoxin [Bacteroides sp. 2_1_16]
Length = 65
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 11/59 (18%)
Query: 70 SMRVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
++ YIC C +IY+ F+ +PD++ CP+CG K F PY
Sbjct: 6 KLKKRDDMKYICTVCDFIYDPEIGDPEGGIEPGTQFEDIPDDWVCPLCGVGKEDFEPYN 64
>gi|260592455|ref|ZP_05857913.1| rubredoxin [Prevotella veroralis F0319]
gi|260535501|gb|EEX18118.1| rubredoxin [Prevotella veroralis F0319]
Length = 54
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGYIY+ F+ +PD++ CP+CG K F P
Sbjct: 2 KKYECNTCGYIYDPEVGDPDSGIAPGTAFEDIPDDWVCPLCGVGKDDFSP 51
>gi|225181040|ref|ZP_03734487.1| Rubredoxin-type Fe(Cys)4 protein [Dethiobacter alkaliphilus AHT 1]
gi|225168237|gb|EEG77041.1| Rubredoxin-type Fe(Cys)4 protein [Dethiobacter alkaliphilus AHT 1]
Length = 54
Score = 40.0 bits (92), Expect = 0.36, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRPY 116
+ ++C CGYIY N+ P F+ LPD++ CP CGA K F Y
Sbjct: 2 EKWVCTYCGYIYDPAAGDPDNDVAPGTAFEALPDDWRCPDCGAEKEDFEKY 52
>gi|333029617|ref|ZP_08457678.1| Rubredoxin-type Fe(Cys)4 protein [Bacteroides coprosuis DSM 18011]
gi|332740214|gb|EGJ70696.1| Rubredoxin-type Fe(Cys)4 protein [Bacteroides coprosuis DSM 18011]
Length = 54
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
+ YIC C Y+Y+ F+ +P+++ CP+CG K F PY
Sbjct: 2 KKYICVVCEYVYDPELGDPDSGIDPGTAFEDIPNDWVCPLCGVGKEDFEPY 52
>gi|47169171|pdb|1SMM|A Chain A, Crystal Structure Of Cp Rd L41a Mutant In Oxidized State
gi|47169172|pdb|1SMU|A Chain A, Crystal Structure Of Cp Rd L41a Mutant In Reduced State 1
(Drop-Reduced)
gi|47169173|pdb|1SMW|A Chain A, Crystal Structure Of Cp Rd L41a Mutant In Reduced State 2
(Soaked)
Length = 54
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIYN F +PD++ CP CG K +F
Sbjct: 2 KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPACGVGKDQF 49
>gi|355678897|ref|ZP_09061081.1| hypothetical protein HMPREF9469_04118 [Clostridium citroniae
WAL-17108]
gi|354812381|gb|EHE96999.1| hypothetical protein HMPREF9469_04118 [Clostridium citroniae
WAL-17108]
Length = 244
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFR 114
+ ++C CG+IY+E +++LP + CP CGA K FR
Sbjct: 2 KKFVCGICGFIYDEAAGIPASGIAPGTRWEELPGGWVCPWCGAAKEMFR 50
>gi|304314630|ref|YP_003849777.1| thiamine pyrophosphate requiring enzyme [Methanothermobacter
marburgensis str. Marburg]
gi|302588089|gb|ADL58464.1| predicted thiamine pyrophosphate requiring enzyme
[Methanothermobacter marburgensis str. Marburg]
Length = 212
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 81 CRDCGYIYNERKP--FDQLPDNYFCPVCGAPKRRF 113
C C YI++E FD LP + CPVC APK F
Sbjct: 6 CTVCNYIFHEENEGEFDSLPVEWRCPVCNAPKDAF 40
>gi|193213880|ref|YP_001995079.1| glutamate synthase [Chloroherpeton thalassium ATCC 35110]
gi|193087357|gb|ACF12632.1| Glutamate synthase (NADPH) [Chloroherpeton thalassium ATCC 35110]
Length = 499
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAN 125
+ + C CG++Y+E F+ + ++ CPVCGA K F V R A
Sbjct: 2 EQFECVICGWVYDENLGDPDSGIASGTKFEDISGDWTCPVCGAGKEHFEKI---VRRAAA 58
Query: 126 DTAVRKARKEQ 136
+ A + +EQ
Sbjct: 59 EEAEKNLSREQ 69
>gi|110802094|ref|YP_698094.1| rubredoxin [Clostridium perfringens SM101]
gi|110682595|gb|ABG85965.1| rubredoxin [Clostridium perfringens SM101]
Length = 53
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
+ +IC CGYIY N +P F +PD++ CP+CG K +F
Sbjct: 2 KKFICDVCGYIYDPTVGDPDNGVEPGTEFKDIPDDWVCPLCGVDKSQF 49
>gi|194337680|ref|YP_002019474.1| rubredoxin-type Fe(Cys)4 protein [Pelodictyon phaeoclathratiforme
BU-1]
gi|194310157|gb|ACF44857.1| Rubredoxin-type Fe(Cys)4 protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 52
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ +IC CGY+Y+ F+ +PD++ CPVCG K F
Sbjct: 2 EKWICIPCGYVYDPEVGDPDGGVEPGTAFEDIPDDWVCPVCGVDKSLF 49
>gi|134113|sp|P00270.1|RUBR_DESGI RecName: Full=Rubredoxin; Short=Rd
gi|118137625|pdb|2DSX|A Chain A, Crystal Structure Of Rubredoxin From Desulfovibrio Gigas
To Ultra-high 0.68 A Resolution
gi|157833662|pdb|1RDG|A Chain A, Rubredoxin From Desulfovibrio Gigas. A Molecular Model Of
The Oxidized Form At 1.4 Angstroms Resolution
gi|157874503|pdb|1E8J|A Chain A, Solution Structure Of Desulfovibrio Gigas Zinc Rubredoxin,
Nmr, 20 Structures
gi|12802728|gb|AAK08075.1|AF325447_4 rubredoxin [Desulfovibrio gigas]
Length = 52
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY Y+ K F+ LPD++ CPVCGA K F
Sbjct: 4 YVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAF 49
>gi|310827112|ref|YP_003959469.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308738846|gb|ADO36506.1| hypothetical protein ELI_1520 [Eubacterium limosum KIST612]
Length = 641
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 11/58 (18%)
Query: 67 PKFSMRVASKQAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
PK + +YIC CGY Y N+ P F+ +P+++ CP+CGA K F
Sbjct: 577 PKAPKPTPAGPSYICGGCGYEYVPDLGDPENDIAPGTLFENVPEDWVCPLCGAEKSEF 634
>gi|225412460|ref|ZP_03761649.1| hypothetical protein CLOSTASPAR_05683 [Clostridium asparagiforme
DSM 15981]
gi|225042020|gb|EEG52266.1| hypothetical protein CLOSTASPAR_05683 [Clostridium asparagiforme
DSM 15981]
Length = 54
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGY+Y+ F+ +PD++ CP+CG K F P
Sbjct: 2 KKYVCDPCGYVYDPEVGDPDGGIAPGTAFEDIPDDWVCPLCGMGKDVFSP 51
>gi|406903263|gb|EKD45401.1| rubredoxin-type Fe(Cys)4 protein [uncultured bacterium]
Length = 54
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY+ F+ LP+N+ CP+CG K F
Sbjct: 2 KKYSCNVCGYIYDPTVGDPDSGIEPGTSFESLPENWVCPICGVGKNEF 49
>gi|354569064|ref|ZP_08988223.1| Rubredoxin-type Fe(Cys)4 protein [Fischerella sp. JSC-11]
gi|353539068|gb|EHC08564.1| Rubredoxin-type Fe(Cys)4 protein [Fischerella sp. JSC-11]
Length = 111
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 11/52 (21%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPA 119
Y CR CGY+Y K PF +LP + CPVC A K F PA
Sbjct: 14 YECRACGYVYEPTKGDEKHDIAPGTPFAELPLTWRCPVCSAKKNAFTNVGPA 65
>gi|55669901|pdb|1T9Q|A Chain A, Crystal Structure Of V44l Cp Rubredoxin
Length = 54
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIYN F +PD++ CP+CG K +F
Sbjct: 2 KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGLGKDQF 49
>gi|310644622|ref|YP_003949381.1| acyl-CoA dehydrogenase [Paenibacillus polymyxa SC2]
gi|309249573|gb|ADO59140.1| Acyl-CoA dehydrogenase family protein/electron transfer protein
[Paenibacillus polymyxa SC2]
gi|392305288|emb|CCI71651.1| High molecular weight rubredoxin [Paenibacillus polymyxa M1]
Length = 56
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPA 119
+ Y+C+ CGY+Y+ F+ LP+++ CPVCG + F P A
Sbjct: 2 KKYVCQPCGYVYDPAMGDPDEDVMPGTAFEDLPEDWVCPVCGEDQSHFAPIDDA 55
>gi|323525273|ref|YP_004227426.1| Rubredoxin-type Fe(Cys)4 protein [Burkholderia sp. CCGE1001]
gi|323382275|gb|ADX54366.1| Rubredoxin-type Fe(Cys)4 protein [Burkholderia sp. CCGE1001]
Length = 59
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 71 MRVASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
M V ++++C CG+IYNE + F +PD++ CP+C K F
Sbjct: 1 MDVTDYKSWVCLICGWIYNEEEGLPDEGIAPGTRFAAIPDDWRCPLCDVGKAEF 54
>gi|116748136|ref|YP_844823.1| rubredoxin-type Fe(Cys)4 protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697200|gb|ABK16388.1| Rubredoxin-type Fe(Cys)4 protein [Syntrophobacter fumaroxidans
MPOB]
Length = 75
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 13/53 (24%)
Query: 76 KQAYICR--DCGYIYN----ERK-------PFDQLPDNYFCPVCGAPKRRFRP 115
++ + C+ +CGY+Y+ +RK F+ LPD++ CPVCG K+ FRP
Sbjct: 5 EEMWRCQTVNCGYVYDPDRGDRKGKIPKGTSFEDLPDSWKCPVCGGTKKCFRP 57
>gi|359461323|ref|ZP_09249886.1| rubredoxin [Acaryochloris sp. CCMEE 5410]
Length = 114
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 11/53 (20%)
Query: 72 RVASKQAYICRDCGYIY-----NERKP------FDQLPDNYFCPVCGAPKRRF 113
V + CR CGYIY ++R+ FDQLP+++ CPVC P +F
Sbjct: 10 EVVPVDRFECRSCGYIYEPDEGDKRRKIPPGTLFDQLPNDWKCPVCRTPMEQF 62
>gi|225570876|ref|ZP_03779899.1| hypothetical protein CLOHYLEM_06980 [Clostridium hylemonae DSM
15053]
gi|225160338|gb|EEG72957.1| hypothetical protein CLOHYLEM_06980 [Clostridium hylemonae DSM
15053]
Length = 55
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ F+ +PD++ CPVCG K F
Sbjct: 4 KKYLCEPCGYVYDPEVGDPDGGIAPGTAFEDIPDDWVCPVCGLGKDVF 51
>gi|219851277|ref|YP_002465709.1| rubredoxin-type Fe(Cys)4 protein [Methanosphaerula palustris E1-9c]
gi|219545536|gb|ACL15986.1| Rubredoxin-type Fe(Cys)4 protein [Methanosphaerula palustris E1-9c]
Length = 52
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYN----ERK-------PFDQLPDNYFCPVCGAPKRRFR 114
+ YIC CG+ Y+ E K F+ LP+++ CPVCGA K FR
Sbjct: 2 EMYICTICGHTYDPAVGEEKQNITPGIAFEDLPEDWTCPVCGAGKAMFR 50
>gi|313892781|ref|ZP_07826362.1| rubredoxin [Veillonella sp. oral taxon 158 str. F0412]
gi|313442712|gb|EFR61123.1| rubredoxin [Veillonella sp. oral taxon 158 str. F0412]
Length = 44
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 77 QAYICRDCGYIYNERK---PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+E F+ P +Y CP+CG K +F
Sbjct: 2 EKYVCVVCGWVYDEAVEGVKFEDQPADYVCPLCGVGKDQF 41
>gi|345018352|ref|YP_004820705.1| rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344033695|gb|AEM79421.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 52
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ + C CGYIY+ + PF++LPD++ CP CG K F
Sbjct: 2 EKWQCTVCGYIYDPEEGDPSQGIAPGTPFEELPDDWVCPDCGVGKDMF 49
>gi|224130732|ref|XP_002328362.1| predicted protein [Populus trichocarpa]
gi|222838077|gb|EEE76442.1| predicted protein [Populus trichocarpa]
Length = 189
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 18/65 (27%)
Query: 67 PKFSMR-------VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGA 108
PKF R V + Y CR CGY Y+E FD+LP + CP CGA
Sbjct: 87 PKFDKRRLEEKFAVLNTGIYECRSCGYKYDESVGDPSYPIPPGFQFDKLPGEWRCPTCGA 146
Query: 109 PKRRF 113
+ F
Sbjct: 147 AQSFF 151
>gi|434407338|ref|YP_007150223.1| rubrerythrin [Cylindrospermum stagnale PCC 7417]
gi|428261593|gb|AFZ27543.1| rubrerythrin [Cylindrospermum stagnale PCC 7417]
Length = 237
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
+ICR C IY+ F+ +P+++ CP+CGA K+ F+
Sbjct: 183 WICRQCSMIYDPIAGDPDSGIAPGTAFEDIPEDWNCPICGASKKTFK 229
>gi|373498312|ref|ZP_09588827.1| rubredoxin [Fusobacterium sp. 12_1B]
gi|404367498|ref|ZP_10972861.1| rubredoxin [Fusobacterium ulcerans ATCC 49185]
gi|313688590|gb|EFS25425.1| rubredoxin [Fusobacterium ulcerans ATCC 49185]
gi|371962352|gb|EHO79961.1| rubredoxin [Fusobacterium sp. 12_1B]
Length = 52
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
+ Y C+ CGYIY+ E P F+ +PD++ CP+CG K F
Sbjct: 2 KKYECKVCGYIYDPVEGDPDGGIAAGTAFEDIPDDWVCPLCGVGKDDF 49
>gi|188588672|ref|YP_001921718.1| rubredoxin [Clostridium botulinum E3 str. Alaska E43]
gi|251779840|ref|ZP_04822760.1| rubredoxin [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|188498953|gb|ACD52089.1| rubredoxin [Clostridium botulinum E3 str. Alaska E43]
gi|243084155|gb|EES50045.1| rubredoxin [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 53
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRF 113
YIC CGYIY+ KP F+ LP N+ CP+C K F
Sbjct: 4 YICDICGYIYDPEMGDIDSNIKPGMKFEDLPCNWICPICNFEKENF 49
>gi|227872301|ref|ZP_03990658.1| rubredoxin [Oribacterium sinus F0268]
gi|227841845|gb|EEJ52118.1| rubredoxin [Oribacterium sinus F0268]
Length = 75
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGYIY+ ++ +P+++ CP+CG K +F P
Sbjct: 23 KKYVCVACGYIYDPEVGEESANVAAGTAWEDVPEDFLCPLCGVGKDQFEP 72
>gi|333984188|ref|YP_004513398.1| rubredoxin-type Fe(Cys)4 protein [Methylomonas methanica MC09]
gi|333808229|gb|AEG00899.1| Rubredoxin-type Fe(Cys)4 protein [Methylomonas methanica MC09]
Length = 56
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ Y CR+C +IY+E K + ++P+++ CP+CGAPK F+
Sbjct: 5 KKYQCRECEHIYDEAKGDPDSGLAPGTRWAEIPNDWSCPICGAPKDFFQ 53
>gi|167039625|ref|YP_001662610.1| rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter sp. X514]
gi|256751527|ref|ZP_05492404.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300915125|ref|ZP_07132440.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter sp. X561]
gi|307725049|ref|YP_003904800.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter sp. X513]
gi|166853865|gb|ABY92274.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter sp. X514]
gi|256749611|gb|EEU62638.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter ethanolicus
CCSD1]
gi|300888849|gb|EFK83996.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter sp. X561]
gi|307582110|gb|ADN55509.1| Rubredoxin-type Fe(Cys)4 protein [Thermoanaerobacter sp. X513]
Length = 52
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ + C CGYIY+ + PF++LPD++ CP CG K F
Sbjct: 2 EKWQCTVCGYIYDPEEGDPSQGIAPGTPFEELPDDWVCPDCGVAKDMF 49
>gi|407712689|ref|YP_006833254.1| rubredoxin-type Fe(Cys)4 protein [Burkholderia phenoliruptrix
BR3459a]
gi|407234873|gb|AFT85072.1| rubredoxin-type Fe(Cys)4 protein [Burkholderia phenoliruptrix
BR3459a]
Length = 70
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 71 MRVASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
M V ++++C CG+IYNE + F +PD++ CP+C K F
Sbjct: 12 MDVTDYKSWVCLICGWIYNEEEGLPDEGIAPGTRFAAIPDDWRCPLCDVGKAEF 65
>gi|54308337|ref|YP_129357.1| anaerobic nitric oxide reductase flavorubredoxin [Photobacterium
profundum SS9]
gi|46912765|emb|CAG19555.1| putative flavoprotein [Photobacterium profundum SS9]
Length = 514
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 76 KQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRP 115
KQ IC C +IYN + ++++PD++ CP CG K+ F P
Sbjct: 462 KQKQICTVCQWIYNPELGEPNQGVEPKTAWEEVPDSFLCPECGIGKQVFEP 512
>gi|146338922|ref|YP_001203970.1| transcriptional regulator [Bradyrhizobium sp. ORS 278]
gi|146191728|emb|CAL75733.1| putative transcriptional regulatory protein GntR family, with an
PLP-dependent aminotransferase, a MOSC and an rubredoxin
domain; putative modular protein [Bradyrhizobium sp. ORS
278]
Length = 873
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 12/62 (19%)
Query: 74 ASKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTR 122
+ Q +ICR C YIY+ F +P ++ CP CG K FRP+ P TR
Sbjct: 811 SGTQPFICRGCYYIYDPAAGQPEQGVAPGTAFAAIPLSWRCPDCGTDKSTFRPHLPG-TR 869
Query: 123 GA 124
A
Sbjct: 870 SA 871
>gi|452966221|gb|EME71234.1| rubredoxin [Magnetospirillum sp. SO-1]
Length = 67
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 11/55 (20%)
Query: 73 VASKQAYICRDCGYIYN-------ERKP----FDQLPDNYFCPVCGAPKRRFRPY 116
+++ Q +IC CG +Y+ + P F+ +PD++ CP CG K F P+
Sbjct: 1 MSNDQIWICVVCGLVYDPVLGLPEDGIPAGTAFEDIPDDWSCPDCGVSKEDFEPH 55
>gi|336399262|ref|ZP_08580062.1| Rubredoxin-type Fe(Cys)4 protein [Prevotella multisaccharivorax DSM
17128]
gi|336068998|gb|EGN57632.1| Rubredoxin-type Fe(Cys)4 protein [Prevotella multisaccharivorax DSM
17128]
Length = 67
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 74 ASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
+ + Y+C CG+IY+ K F+ LP+++ CP CG K F P
Sbjct: 13 TTMKKYVCTVCGWIYDPAKGDPDNGIQPGTAFEDLPEDWTCPECGVGKEDFEP 65
>gi|291278976|ref|YP_003495811.1| rubredoxin [Deferribacter desulfuricans SSM1]
gi|290753678|dbj|BAI80055.1| rubredoxin [Deferribacter desulfuricans SSM1]
Length = 52
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRP 115
Y+C CG+IY N +P F+ +P+++ CP CGA K F P
Sbjct: 3 YVCTICGWIYDPEIGDPDNGVEPGTAFEDIPEDWVCPECGASKEAFEP 50
>gi|258646724|ref|ZP_05734193.1| rubredoxin [Dialister invisus DSM 15470]
gi|260404153|gb|EEW97700.1| rubredoxin [Dialister invisus DSM 15470]
Length = 54
Score = 39.7 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C+ CG+IY+E ++ LPD++ CP+CG K F
Sbjct: 2 KKYVCKVCGWIYDEALGDPDNGIAPGTKWEDLPDDFKCPLCGVGKDDF 49
>gi|88602720|ref|YP_502898.1| rubredoxin-type Fe(Cys)4 protein [Methanospirillum hungatei JF-1]
gi|88188182|gb|ABD41179.1| Rubredoxin-type Fe(Cys)4 protein [Methanospirillum hungatei JF-1]
Length = 74
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 72 RVASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPK 110
R + A++C CGY+Y+ER F+++PD + CP C A K
Sbjct: 17 RYSDMAAWVCTKCGYVYDERFGDPEHGIVAGTLFEKIPDTWVCPRCKAAK 66
>gi|357059485|ref|ZP_09120327.1| rubredoxin [Selenomonas infelix ATCC 43532]
gi|355371562|gb|EHG18906.1| rubredoxin [Selenomonas infelix ATCC 43532]
Length = 53
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ ++C CG++Y+E F+ LPD++ CP+CG K F
Sbjct: 2 KTWVCTVCGWVYDEAAGDADYDLAPGVAFEDLPDDFVCPLCGVDKSLF 49
>gi|124024572|ref|YP_001018879.1| rubredoxin:rubrerythrin:rubredoxin-type Fe(Cys)4 protein
[Prochlorococcus marinus str. MIT 9303]
gi|123964858|gb|ABM79614.1| Rubredoxin:Rubrerythrin:Rubredoxin-type Fe(Cys)4 protein
[Prochlorococcus marinus str. MIT 9303]
Length = 235
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ F+ +P+++ CP+CG K F PY A + A
Sbjct: 178 WICKVCSMIYDPAIGDPESGISAGTAFEAIPEDWVCPICGTRKANFVPYREAELKEA 234
>gi|18309762|ref|NP_561696.1| rubredoxin [Clostridium perfringens str. 13]
gi|110799465|ref|YP_695233.1| rubredoxin [Clostridium perfringens ATCC 13124]
gi|168204502|ref|ZP_02630507.1| rubredoxin [Clostridium perfringens E str. JGS1987]
gi|168209259|ref|ZP_02634884.1| rubredoxin [Clostridium perfringens B str. ATCC 3626]
gi|168214291|ref|ZP_02639916.1| rubredoxin [Clostridium perfringens CPE str. F4969]
gi|168217450|ref|ZP_02643075.1| rubredoxin [Clostridium perfringens NCTC 8239]
gi|169344407|ref|ZP_02865376.1| rubredoxin [Clostridium perfringens C str. JGS1495]
gi|422345233|ref|ZP_16426147.1| rubredoxin-2 [Clostridium perfringens WAL-14572]
gi|20141689|sp|P14072.2|RUBR2_CLOPE RecName: Full=Rubredoxin-2; Short=Rd 2
gi|18144440|dbj|BAB80486.1| rubredoxin [Clostridium perfringens str. 13]
gi|110674112|gb|ABG83099.1| rubredoxin [Clostridium perfringens ATCC 13124]
gi|169297327|gb|EDS79436.1| rubredoxin [Clostridium perfringens C str. JGS1495]
gi|170663850|gb|EDT16533.1| rubredoxin [Clostridium perfringens E str. JGS1987]
gi|170712599|gb|EDT24781.1| rubredoxin [Clostridium perfringens B str. ATCC 3626]
gi|170714236|gb|EDT26418.1| rubredoxin [Clostridium perfringens CPE str. F4969]
gi|182380539|gb|EDT78018.1| rubredoxin [Clostridium perfringens NCTC 8239]
gi|373227958|gb|EHP50268.1| rubredoxin-2 [Clostridium perfringens WAL-14572]
Length = 53
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
+ +IC CGYIY N +P F +PD++ CP+CG K +F
Sbjct: 2 KKFICDVCGYIYDPAVGDPDNGVEPGTEFKDIPDDWVCPLCGVDKSQF 49
>gi|118578906|ref|YP_900156.1| rubredoxin-type Fe(Cys)4 protein [Pelobacter propionicus DSM 2379]
gi|118501616|gb|ABK98098.1| Rubredoxin-type Fe(Cys)4 protein [Pelobacter propionicus DSM 2379]
Length = 52
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Q + C CGY+Y+ + PF+ LPD + CP CG K F
Sbjct: 2 QKWKCTICGYVYDPAEGDIGNGIAPGTPFEDLPDEWVCPQCGVGKDMF 49
>gi|345862326|ref|ZP_08814555.1| rubredoxin [Desulfosporosinus sp. OT]
gi|344324613|gb|EGW36162.1| rubredoxin [Desulfosporosinus sp. OT]
Length = 53
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYVCTACGYVYDPEVGDPDSGIAPGTAFEDIPDDWVCPLCGVSKSEF 49
>gi|148642248|ref|YP_001272761.1| rubredoxin [Methanobrevibacter smithii ATCC 35061]
gi|222444579|ref|ZP_03607094.1| hypothetical protein METSMIALI_00191 [Methanobrevibacter smithii
DSM 2375]
gi|261350881|ref|ZP_05976298.1| rubredoxin [Methanobrevibacter smithii DSM 2374]
gi|148551265|gb|ABQ86393.1| rubredoxin [Methanobrevibacter smithii ATCC 35061]
gi|222434144|gb|EEE41309.1| rubredoxin [Methanobrevibacter smithii DSM 2375]
gi|288860219|gb|EFC92517.1| rubredoxin [Methanobrevibacter smithii DSM 2374]
Length = 52
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 11/45 (24%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
C CGYIY+ K F+ LPD++ CP CGA K F+
Sbjct: 6 CSVCGYIYDSEKGIPEKGIEAGTEFEDLPDDFKCPRCGAGKALFK 50
>gi|332297515|ref|YP_004439437.1| rubredoxin-type Fe(Cys)4 protein [Treponema brennaborense DSM
12168]
gi|332180618|gb|AEE16306.1| Rubredoxin-type Fe(Cys)4 protein [Treponema brennaborense DSM
12168]
Length = 52
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ F+ +PD++ CPVCG K F
Sbjct: 4 YVCSVCGYVYDPAMGDPDGGIAAGTAFEDIPDDWVCPVCGVGKDSF 49
>gi|322421098|ref|YP_004200321.1| rubredoxin-type Fe(Cys)4 protein [Geobacter sp. M18]
gi|320127485|gb|ADW15045.1| Rubredoxin-type Fe(Cys)4 protein [Geobacter sp. M18]
Length = 52
Score = 39.7 bits (91), Expect = 0.47, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC C Y+Y+ PF LPD++ CPVCG K F P
Sbjct: 2 EPYICTVCQYVYDPYVGDPDNGVPPGTPFADLPDDWVCPVCGVGKEAFEP 51
>gi|218887456|ref|YP_002436777.1| rubredoxin-type Fe(Cys)4 protein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|22450192|dbj|BAC10582.1| rubredoxin-like protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758410|gb|ACL09309.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 75
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 83 DCGYIYN----ERKP-------FDQLPDNYFCPVCGAPKRRFRP 115
+CGY+Y+ +RK F+ LPD + CPVCG KR FRP
Sbjct: 14 NCGYVYDPDRGDRKGKVPPGVRFEDLPDTWRCPVCGGTKRCFRP 57
>gi|253700669|ref|YP_003021858.1| rubredoxin-type Fe(Cys)4 protein [Geobacter sp. M21]
gi|251775519|gb|ACT18100.1| Rubredoxin-type Fe(Cys)4 protein [Geobacter sp. M21]
Length = 52
Score = 39.7 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY+ F+ +PD++ CP+CGA K F
Sbjct: 2 KKYRCTVCGYIYDPETGDLDSGIQPGTAFEDIPDDWVCPLCGAEKSLF 49
>gi|428218034|ref|YP_007102499.1| rubredoxin-type Fe(Cys)4 protein [Pseudanabaena sp. PCC 7367]
gi|427989816|gb|AFY70071.1| Rubredoxin-type Fe(Cys)4 protein [Pseudanabaena sp. PCC 7367]
Length = 117
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ C+ CGY+Y K PF QL N+ CPVC A K++F
Sbjct: 20 FECKSCGYVYEPEKGEPRKGVPGGTPFAQLAPNWRCPVCNASKKQF 65
>gi|373494273|ref|ZP_09584878.1| hypothetical protein HMPREF0380_00516 [Eubacterium infirmum F0142]
gi|371968770|gb|EHO86224.1| hypothetical protein HMPREF0380_00516 [Eubacterium infirmum F0142]
Length = 640
Score = 39.7 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 18/67 (26%)
Query: 65 AAPKFSMRVASK-------QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVC 106
A P+ MR A+ + ++C+ CGY Y+ K F+ LP+ + CP+C
Sbjct: 563 APPRVKMRKATVLKEPSPWEIHVCKGCGYEYDPAKGDEEGGVSIGTTFESLPEEWICPLC 622
Query: 107 GAPKRRF 113
G K F
Sbjct: 623 GEEKTGF 629
>gi|374996900|ref|YP_004972399.1| rubredoxin [Desulfosporosinus orientis DSM 765]
gi|357215266|gb|AET69884.1| rubredoxin [Desulfosporosinus orientis DSM 765]
Length = 53
Score = 39.7 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y C CGY+Y+ F+ +PD++ CP CG K +F P
Sbjct: 2 KKYQCSVCGYVYDPAIGDQDSGIAPGTSFEDIPDDWVCPTCGVTKDQFEP 51
>gi|33864430|ref|NP_895990.1| rubredoxin:rubrerythrin:rubredoxin-type Fe(Cys)4 protein
[Prochlorococcus marinus str. MIT 9313]
gi|33641210|emb|CAE22340.1| Rubredoxin:Rubrerythrin:Rubredoxin-type Fe(Cys)4 protein
[Prochlorococcus marinus str. MIT 9313]
Length = 266
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 11/57 (19%)
Query: 79 YICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGA 124
+IC+ C IY+ F+ +P+++ CP+CG K F PY A + A
Sbjct: 209 WICKVCSMIYDPAIGDPESGISAGTAFEAIPEDWVCPICGTRKANFVPYREAELKEA 265
>gi|414878590|tpg|DAA55721.1| TPA: hypothetical protein ZEAMMB73_770651 [Zea mays]
Length = 206
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 18/75 (24%)
Query: 58 QQQLLASAAPKFSMR-------VASKQAYICRDCGYIYNERK-----------PFDQLPD 99
QQ PK R V + + CR CGY Y++ PF QLPD
Sbjct: 83 HQQEDEDGGPKLDPRRFEEKFAVLNTGVHECRSCGYRYDQTAGDPSYPVPPGLPFMQLPD 142
Query: 100 NYFCPVCGAPKRRFR 114
++ CP CG + F
Sbjct: 143 DWRCPTCGVARSFFE 157
>gi|325678891|ref|ZP_08158489.1| rubredoxin [Ruminococcus albus 8]
gi|324109395|gb|EGC03613.1| rubredoxin [Ruminococcus albus 8]
Length = 52
Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Y+C CGYIY+ + ++ +PD++ CP+CG K +F P
Sbjct: 3 YVCDICGYIYDPEEGAPDAGVAAGTAWEDVPDDFVCPLCGVGKDQFSP 50
>gi|258515509|ref|YP_003191731.1| rubredoxin-type Fe(Cys)4 protein [Desulfotomaculum acetoxidans DSM
771]
gi|257779214|gb|ACV63108.1| Rubredoxin-type Fe(Cys)4 protein [Desulfotomaculum acetoxidans DSM
771]
Length = 51
Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 9/46 (19%)
Query: 77 QAYICRDCGYIYNERK---------PFDQLPDNYFCPVCGAPKRRF 113
+ + C CGY+Y+ + F+ LP+++ CPVCGA K +F
Sbjct: 2 EKWECDVCGYVYDPAEGADDVEPGTAFENLPEDWVCPVCGADKSQF 47
>gi|323693100|ref|ZP_08107319.1| rubredoxin [Clostridium symbiosum WAL-14673]
gi|323502854|gb|EGB18697.1| rubredoxin [Clostridium symbiosum WAL-14673]
Length = 53
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ F+ +PD++ CP+CG K F
Sbjct: 4 YLCEPCGYIYDPAIGDPEGGIAPGTAFEDIPDDWVCPICGVGKDMF 49
>gi|302669728|ref|YP_003829688.1| rubredoxin Rub [Butyrivibrio proteoclasticus B316]
gi|302394201|gb|ADL33106.1| rubredoxin Rub [Butyrivibrio proteoclasticus B316]
Length = 52
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+E +D LP ++ CP+CG K F
Sbjct: 3 YVCNTCGYIYDEAAGDPDNGIAPGTKWDDLPADFVCPLCGVGKEDF 48
>gi|346313330|ref|ZP_08854860.1| hypothetical protein HMPREF9022_00517 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345898243|gb|EGX68124.1| hypothetical protein HMPREF9022_00517 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 634
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 15/71 (21%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNER-----------KPFDQLPDNYF 102
+PP ++ P S ++C CGY Y++ PF++LP+ +
Sbjct: 563 APPMKKM----KRPFIKKEAPSYMRHVCNGCGYEYDQMLGDPENDIAPGTPFEKLPEEWI 618
Query: 103 CPVCGAPKRRF 113
CP CG K +F
Sbjct: 619 CPECGEAKDQF 629
>gi|313898664|ref|ZP_07832199.1| rubredoxin [Clostridium sp. HGF2]
gi|422329807|ref|ZP_16410832.1| hypothetical protein HMPREF0981_04152 [Erysipelotrichaceae
bacterium 6_1_45]
gi|312956548|gb|EFR38181.1| rubredoxin [Clostridium sp. HGF2]
gi|371655671|gb|EHO21011.1| hypothetical protein HMPREF0981_04152 [Erysipelotrichaceae
bacterium 6_1_45]
Length = 634
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 15/71 (21%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNER-----------KPFDQLPDNYF 102
+PP ++ P S ++C CGY Y++ PF++LP+ +
Sbjct: 563 APPMKKM----KRPFIKKEAPSYMRHVCNGCGYEYDQMLGDPENDIAPGTPFEKLPEEWI 618
Query: 103 CPVCGAPKRRF 113
CP CG K +F
Sbjct: 619 CPECGEAKDQF 629
>gi|242055699|ref|XP_002456995.1| hypothetical protein SORBIDRAFT_03g046910 [Sorghum bicolor]
gi|241928970|gb|EES02115.1| hypothetical protein SORBIDRAFT_03g046910 [Sorghum bicolor]
Length = 211
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 25/111 (22%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
V + + CR CGY Y++ PF QLPD++ CP CGA + F
Sbjct: 110 VLNTGIHECRSCGYRYDQAAGDPSYPVPPGLPFAQLPDDWRCPTCGAAQSFFE------- 162
Query: 122 RGANDTAVRKARKEQIQRDEAIGKALPI---AIAVAAVALAGLYFYLNSAF 169
+V A Q Q+ G +L + + L G F+++ F
Sbjct: 163 ----SKSVEIAGFAQNQQFGLGGNSLTSGQKGLLIYGSLLVGFLFFISGYF 209
>gi|2622566|gb|AAB85928.1| 6Fe-6S prismane-containing protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 476
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 93 PFDQLPDNYFCPVCGAPKRRFRPYTPAVTR 122
PF++LPD++ CPVC K +F P + R
Sbjct: 13 PFEELPDDWLCPVCNVGKDQFEPLRGEIKR 42
>gi|383754737|ref|YP_005433640.1| putative rubredoxin [Selenomonas ruminantium subsp. lactilytica
TAM6421]
gi|381366789|dbj|BAL83617.1| putative rubredoxin [Selenomonas ruminantium subsp. lactilytica
TAM6421]
Length = 52
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ ++C CG+IY+E K F LP+++ CP+CG K F
Sbjct: 2 KTWVCTVCGWIYDEEKGDSEYDLAPGVAFADLPEDFVCPLCGVGKDMF 49
>gi|302780589|ref|XP_002972069.1| hypothetical protein SELMODRAFT_96287 [Selaginella moellendorffii]
gi|302781678|ref|XP_002972613.1| hypothetical protein SELMODRAFT_97167 [Selaginella moellendorffii]
gi|300160080|gb|EFJ26699.1| hypothetical protein SELMODRAFT_97167 [Selaginella moellendorffii]
gi|300160368|gb|EFJ26986.1| hypothetical protein SELMODRAFT_96287 [Selaginella moellendorffii]
Length = 107
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 13/65 (20%)
Query: 67 PKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
KF++R K CR CGY+Y++ F QLP+++ C CGA K F
Sbjct: 2 EKFAVRDLGKHQ--CRSCGYVYDQTVGDPSYPIAPGVEFAQLPEDWRCSTCGAAKSYFNS 59
Query: 116 YTPAV 120
+ V
Sbjct: 60 ISVEV 64
>gi|219852565|ref|YP_002466997.1| rubredoxin-type Fe(Cys)4 protein [Methanosphaerula palustris E1-9c]
gi|219546824|gb|ACL17274.1| Rubredoxin-type Fe(Cys)4 protein [Methanosphaerula palustris E1-9c]
Length = 127
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 11/39 (28%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVC 106
YIC CGYIY+E++ F+ LPD+Y CPVC
Sbjct: 65 YICPICGYIYDEKRGEPHRGIPAGTRFEDLPDDYICPVC 103
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 17/60 (28%)
Query: 77 QAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKR------RFRPYTPA 119
+ Y C+ CGYIY+ E F+ LPD+Y CP+CG + F P+ P
Sbjct: 4 KRYKCKVCGYIYSPLRGEPAHGIPEGTAFEDLPDDYACPLCGLQGKGTIGTWGFEPWNPT 63
>gi|212696625|ref|ZP_03304753.1| hypothetical protein ANHYDRO_01165 [Anaerococcus hydrogenalis DSM
7454]
gi|256544448|ref|ZP_05471821.1| high molecular weight rubredoxin [Anaerococcus vaginalis ATCC
51170]
gi|212676356|gb|EEB35963.1| hypothetical protein ANHYDRO_01165 [Anaerococcus hydrogenalis DSM
7454]
gi|256399773|gb|EEU13377.1| high molecular weight rubredoxin [Anaerococcus vaginalis ATCC
51170]
Length = 52
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ F LP+++ CPVCG K F
Sbjct: 3 YVCTACGYIYDPANGDPDNGIDAGTEFKDLPEDWVCPVCGVGKDMF 48
>gi|392959711|ref|ZP_10325192.1| hypothetical protein FR7_0022 [Pelosinus fermentans DSM 17108]
gi|421056360|ref|ZP_15519278.1| hypothetical protein FB4_1092 [Pelosinus fermentans B4]
gi|421058691|ref|ZP_15521357.1| hypothetical protein FB3_1954 [Pelosinus fermentans B3]
gi|421066927|ref|ZP_15528467.1| hypothetical protein FA12_3839 [Pelosinus fermentans A12]
gi|421070065|ref|ZP_15531202.1| Rubredoxin-type Fe(Cys)4 protein [Pelosinus fermentans A11]
gi|392438198|gb|EIW16056.1| hypothetical protein FB4_1092 [Pelosinus fermentans B4]
gi|392448803|gb|EIW25980.1| Rubredoxin-type Fe(Cys)4 protein [Pelosinus fermentans A11]
gi|392452485|gb|EIW29428.1| hypothetical protein FA12_3839 [Pelosinus fermentans A12]
gi|392456095|gb|EIW32854.1| hypothetical protein FR7_0022 [Pelosinus fermentans DSM 17108]
gi|392460291|gb|EIW36609.1| hypothetical protein FB3_1954 [Pelosinus fermentans B3]
Length = 185
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Query: 81 CRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVT 121
C+ CG+I +E D CP CG PK F PYT ++
Sbjct: 7 CKACGFIMDENHVED------LCPACGLPKTVFEPYTKKIS 41
>gi|365175836|ref|ZP_09363260.1| rubredoxin [Synergistes sp. 3_1_syn1]
gi|363612089|gb|EHL63647.1| rubredoxin [Synergistes sp. 3_1_syn1]
Length = 50
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ F+ +PD++ CPVCG K F
Sbjct: 2 KKYVCTVCGYVYDPEAGDPDSGIAPGTAFEDIPDDWVCPVCGVGKDMF 49
>gi|153812570|ref|ZP_01965238.1| hypothetical protein RUMOBE_02970 [Ruminococcus obeum ATCC 29174]
gi|149831274|gb|EDM86362.1| rubredoxin [Ruminococcus obeum ATCC 29174]
Length = 596
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
K+ ++C+ CGYIY D+LP++ CP+C F P
Sbjct: 559 KKGFVCKVCGYIYEG----DELPEDIICPLCKHGAVDFEP 594
>gi|153814166|ref|ZP_01966834.1| hypothetical protein RUMTOR_00375 [Ruminococcus torques ATCC 27756]
gi|317499964|ref|ZP_07958200.1| rubredoxin [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087811|ref|ZP_08336737.1| rubredoxin-2 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336438236|ref|ZP_08617876.1| rubredoxin-2 [Lachnospiraceae bacterium 1_1_57FAA]
gi|145848562|gb|EDK25480.1| rubredoxin [Ruminococcus torques ATCC 27756]
gi|316898681|gb|EFV20716.1| rubredoxin [Lachnospiraceae bacterium 8_1_57FAA]
gi|330409792|gb|EGG89228.1| rubredoxin-2 [Lachnospiraceae bacterium 3_1_46FAA]
gi|336014042|gb|EGN43905.1| rubredoxin-2 [Lachnospiraceae bacterium 1_1_57FAA]
Length = 53
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+E ++ +P+++ CP+CG K F
Sbjct: 2 KKYVCDVCGYIYDEEIGDPDNGVEAGTKWEDVPEDFLCPLCGVGKDEF 49
>gi|440300846|gb|ELP93293.1| hypothetical protein EIN_056780 [Entamoeba invadens IP1]
Length = 194
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 59 QQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
Q++L + ASK ++CR+CG+I+ Q P N CP+CG P FR
Sbjct: 140 QKILDELKANNLYKKASKVFWVCRECGFIFEGT----QAPKN--CPLCGMPGDYFR 189
>gi|432331981|ref|YP_007250124.1| rubredoxin [Methanoregula formicicum SMSP]
gi|432138690|gb|AGB03617.1| rubredoxin [Methanoregula formicicum SMSP]
Length = 207
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 11/40 (27%)
Query: 79 YICRDCGYIYN-----------ERKPFDQLPDNYFCPVCG 107
Y C CGYIY+ PF+ LPD Y CPVCG
Sbjct: 87 YRCTLCGYIYSPLIGEPHNGIPRNTPFEDLPDTYVCPVCG 126
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 11/39 (28%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVC 106
YIC C Y+Y+E++ F+ LPD+Y CPVC
Sbjct: 146 YICSMCNYVYDEKRGEPHRGIKPGTKFEDLPDDYACPVC 184
>gi|428214431|ref|YP_007087575.1| rubredoxin [Oscillatoria acuminata PCC 6304]
gi|428002812|gb|AFY83655.1| rubredoxin [Oscillatoria acuminata PCC 6304]
Length = 154
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 13/84 (15%)
Query: 48 SLHLLLSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERK----------PFDQL 97
++ L+ P H L+S + +++ Y CR CGY+Y K F ++
Sbjct: 30 NIVLMFGPSHP---LSSMNTEEAVQPEELDQYECRSCGYVYEPEKGDGRKIAPETAFTEV 86
Query: 98 PDNYFCPVCGAPKRRFRPYTPAVT 121
P + CPVCGA +F P T
Sbjct: 87 PLTWRCPVCGAKPTQFSNIGPKGT 110
>gi|357055182|ref|ZP_09116256.1| rubredoxin [Clostridium clostridioforme 2_1_49FAA]
gi|355383138|gb|EHG30224.1| rubredoxin [Clostridium clostridioforme 2_1_49FAA]
Length = 54
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG+IY+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYVCDPCGWIYDPEVGDPDGGIEPGTAFEDIPDDWVCPICGVGKDMF 49
>gi|255066344|ref|ZP_05318199.1| rubredoxin [Neisseria sicca ATCC 29256]
gi|340363061|ref|ZP_08685415.1| rubredoxin/rubredoxin reductase [Neisseria macacae ATCC 33926]
gi|349610079|ref|ZP_08889440.1| rubredoxin [Neisseria sp. GT4A_CT1]
gi|419796655|ref|ZP_14322183.1| rubredoxin [Neisseria sicca VK64]
gi|255049554|gb|EET45018.1| rubredoxin [Neisseria sicca ATCC 29256]
gi|339886749|gb|EGQ76379.1| rubredoxin/rubredoxin reductase [Neisseria macacae ATCC 33926]
gi|348610738|gb|EGY60421.1| rubredoxin [Neisseria sp. GT4A_CT1]
gi|385699283|gb|EIG29592.1| rubredoxin [Neisseria sicca VK64]
Length = 56
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CG+IY+E FD +PD++ CP CG K F
Sbjct: 4 YMCGPCGWIYDEDLGDPEHGIAPGTKFDDIPDDWKCPECGVGKEDF 49
>gi|227486223|ref|ZP_03916539.1| rubredoxin [Anaerococcus lactolyticus ATCC 51172]
gi|227235854|gb|EEI85869.1| rubredoxin [Anaerococcus lactolyticus ATCC 51172]
Length = 51
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
Y+C CGYIY+ + F LP+++ CPVCG K F
Sbjct: 3 YVCTACGYIYDPAEGDVDNGIEAGTEFADLPEDWVCPVCGVGKDMF 48
>gi|333988353|ref|YP_004520960.1| hydroxylamine reductase [Methanobacterium sp. SWAN-1]
gi|333826497|gb|AEG19159.1| Hydroxylamine reductase [Methanobacterium sp. SWAN-1]
Length = 496
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y C C Y+Y+ K F+ LPD++ CP+CG K +F
Sbjct: 2 KKYKCLLCEYVYDPEKGDPDAGIEPGTAFEDLPDDWICPICGVGKDQF 49
>gi|309774765|ref|ZP_07669787.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
gi|308917450|gb|EFP63168.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 3_1_53]
Length = 634
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 15/71 (21%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNER-----------KPFDQLPDNYF 102
+PP ++ P S ++C CGY Y++ PF++LP+ +
Sbjct: 563 APPMKKM----KRPFIKKEAPSYMRHVCNGCGYEYDQMLGDPENDIAPGTPFEKLPEEWI 618
Query: 103 CPVCGAPKRRF 113
CP CG K +F
Sbjct: 619 CPECGEAKDQF 629
>gi|225848281|ref|YP_002728444.1| rubredoxin [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644716|gb|ACN99766.1| rubredoxin [Sulfurihydrogenibium azorense Az-Fu1]
Length = 61
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 68 KFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
K ++ S Y CR CGY+Y+ K F LPD + CPVC K+ FR
Sbjct: 2 KVLVKKESNVKYRCRVCGYVYDPEKGDEINLISPGVEFVDLPDKWRCPVCNYSKKEFR 59
>gi|160878244|ref|YP_001557212.1| flavin reductase domain-containing protein [Clostridium
phytofermentans ISDg]
gi|160426910|gb|ABX40473.1| flavin reductase domain protein FMN-binding [Clostridium
phytofermentans ISDg]
Length = 205
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
Y C CGYI + D LPD++ CPVCG FR
Sbjct: 171 GYQCTVCGYI----EETDDLPDDFICPVCGKDASYFR 203
>gi|434393222|ref|YP_007128169.1| Rubredoxin-type Fe(Cys)4 protein [Gloeocapsa sp. PCC 7428]
gi|428265063|gb|AFZ31009.1| Rubredoxin-type Fe(Cys)4 protein [Gloeocapsa sp. PCC 7428]
Length = 111
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTP 118
Y CR CGY+Y K PF +L ++ CPVCGA +F P
Sbjct: 14 YECRVCGYVYEPTKGDSKEEVPAGTPFTELASSWRCPVCGARTSQFENIGP 64
>gi|91787033|ref|YP_547985.1| rubredoxin-type Fe(Cys)4 protein [Polaromonas sp. JS666]
gi|91696258|gb|ABE43087.1| Rubredoxin-type Fe(Cys)4 protein [Polaromonas sp. JS666]
Length = 57
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
+ ++C CG+IY+E P+ Q+P N+ CP CGA K F
Sbjct: 1 MTQSMTWMCLICGWIYDEAAGAPEHGIAPGTPWAQVPMNWTCPECGARKEDFE 53
>gi|338811570|ref|ZP_08623777.1| Rubredoxin-type Fe(Cys)4 protein [Acetonema longum DSM 6540]
gi|337276445|gb|EGO64875.1| Rubredoxin-type Fe(Cys)4 protein [Acetonema longum DSM 6540]
Length = 51
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
++C CGY+Y+E F+ +P+++ CPVCG K +F
Sbjct: 3 WVCDVCGYVYDEAAGDPDSGIAPGTKFEDIPNDWVCPVCGVGKDQF 48
>gi|167580258|ref|ZP_02373132.1| rubredoxin-related protein [Burkholderia thailandensis TXDOH]
gi|167618381|ref|ZP_02387012.1| rubredoxin-related protein [Burkholderia thailandensis Bt4]
gi|257139825|ref|ZP_05588087.1| rubredoxin-related protein [Burkholderia thailandensis E264]
Length = 60
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 11/53 (20%)
Query: 72 RVASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
V ++++C CG++YNE + F +PDN+ CP+C K F
Sbjct: 3 EVVEYKSWVCLICGWVYNEAEGLPDEGIAAGTRFADIPDNWRCPLCDVGKEDF 55
>gi|355673628|ref|ZP_09059103.1| hypothetical protein HMPREF9469_02140 [Clostridium citroniae
WAL-17108]
gi|354814341|gb|EHE98941.1| hypothetical protein HMPREF9469_02140 [Clostridium citroniae
WAL-17108]
Length = 209
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 66 APKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
AP + Y C CGYI D LPD++ CPVCG F
Sbjct: 163 APSYQENTEKAAGYRCTVCGYILES----DTLPDDFICPVCGKDASYF 206
>gi|333998827|ref|YP_004531439.1| rubredoxin [Treponema primitia ZAS-2]
gi|333739022|gb|AEF84512.1| rubredoxin [Treponema primitia ZAS-2]
Length = 53
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRFRP 115
Q Y+C CGYIY+ + KP F LP ++ CP CG K F P
Sbjct: 3 QKYVCNVCGYIYDPAVGDKGGDIKPGTAFADLPSDWACPTCGVGKDSFDP 52
>gi|340754550|ref|ZP_08691296.1| rubredoxin [Fusobacterium sp. D12]
gi|373112370|ref|ZP_09526602.1| hypothetical protein HMPREF9466_00635 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|419841504|ref|ZP_14364873.1| rubredoxin [Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|421499802|ref|ZP_15946832.1| rubredoxin [Fusobacterium necrophorum subsp. funduliforme Fnf 1007]
gi|313685565|gb|EFS22400.1| rubredoxin [Fusobacterium sp. D12]
gi|371655789|gb|EHO21127.1| hypothetical protein HMPREF9466_00635 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|386905030|gb|EIJ69811.1| rubredoxin [Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|402269334|gb|EJU18672.1| rubredoxin [Fusobacterium necrophorum subsp. funduliforme Fnf 1007]
Length = 56
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFR 114
Y+C CGY+Y+ F+ LP ++ CP CG K FR
Sbjct: 4 YVCEVCGYVYDSTLGDVDNGIPAGTKFEDLPADWVCPPCGVSKDHFR 50
>gi|83312528|ref|YP_422792.1| rubredoxin [Magnetospirillum magneticum AMB-1]
gi|82947369|dbj|BAE52233.1| Rubredoxin [Magnetospirillum magneticum AMB-1]
Length = 68
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 11/58 (18%)
Query: 73 VASKQAYICRDCGYIYN-------ERKP----FDQLPDNYFCPVCGAPKRRFRPYTPA 119
++ Q +IC CG +Y+ + P F+ +PD++ CP CG K F P++ A
Sbjct: 2 MSDDQIWICVICGLVYDPVLGLPEDGIPPGTAFEDIPDDWSCPDCGCSKADFEPHSEA 59
>gi|392412576|ref|YP_006449183.1| rubredoxin [Desulfomonile tiedjei DSM 6799]
gi|390625712|gb|AFM26919.1| rubredoxin [Desulfomonile tiedjei DSM 6799]
Length = 51
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
Y+C+ CGY+Y+ E P F LP + CPVCGA K F P
Sbjct: 3 YVCQVCGYVYDPAEGDPDNGVAAGTEFADLPAEWVCPVCGADKDSFSP 50
>gi|317486277|ref|ZP_07945109.1| rubredoxin [Bilophila wadsworthia 3_1_6]
gi|345888015|ref|ZP_08839143.1| rubredoxin-2 [Bilophila sp. 4_1_30]
gi|316922447|gb|EFV43701.1| rubredoxin [Bilophila wadsworthia 3_1_6]
gi|345041201|gb|EGW45387.1| rubredoxin-2 [Bilophila sp. 4_1_30]
Length = 61
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 13/57 (22%)
Query: 76 KQAYIC--RDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRFRPYTPA 119
K Y C +CGY+Y+ + F+ LP+++ CPVCGA K+ F+P + A
Sbjct: 5 KDMYRCPVSNCGYVYDPDRGDKRRKIPAGTRFEDLPEDWTCPVCGASKKNFKPLSEA 61
>gi|374262927|ref|ZP_09621487.1| hypothetical protein LDG_7923 [Legionella drancourtii LLAP12]
gi|363536743|gb|EHL30177.1| hypothetical protein LDG_7923 [Legionella drancourtii LLAP12]
Length = 58
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERKPF-----------DQLPDNYFCPVCGAPKRRF 113
+ +IC CG+IY+E + + + +P+N+FCP CGA K F
Sbjct: 5 KKFICVICGFIYDEAEGWPEDGIEPGTRWEDVPENWFCPDCGAGKEDF 52
>gi|432328055|ref|YP_007246199.1| rubredoxin [Aciduliprofundum sp. MAR08-339]
gi|432134764|gb|AGB04033.1| rubredoxin [Aciduliprofundum sp. MAR08-339]
Length = 52
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+ PF+ LP+++ CPVCGA K F
Sbjct: 5 CMVCGYIYDPAVGDPDSDVPAGTPFEDLPEDWVCPVCGASKDMF 48
>gi|158522654|ref|YP_001530524.1| rubredoxin-type Fe(Cys)4 protein [Desulfococcus oleovorans Hxd3]
gi|158511480|gb|ABW68447.1| Rubredoxin-type Fe(Cys)4 protein [Desulfococcus oleovorans Hxd3]
Length = 59
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 11/44 (25%)
Query: 83 DCGYIYN----ERKP-------FDQLPDNYFCPVCGAPKRRFRP 115
+CGYIYN +RK F LPD++ CPVCGA K+ F P
Sbjct: 14 NCGYIYNSDRGDRKGKIEKGTRFADLPDDWKCPVCGAGKKMFAP 57
>gi|421527587|ref|ZP_15974185.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum ChDC F128]
gi|402256266|gb|EJU06750.1| acyl-CoA dehydrogenase [Fusobacterium nucleatum ChDC F128]
Length = 637
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 16/68 (23%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNER--------KP---FDQLPDNYF 102
+PP ++ + PK V S Y+C CG+ YN KP F LP+++
Sbjct: 568 APPMKK--MKRVVPKV---VYSPHVYVCSGCGHEYNPEIGDEDSDIKPGTRFKDLPEDWT 622
Query: 103 CPVCGAPK 110
CP CG PK
Sbjct: 623 CPDCGDPK 630
>gi|384262708|ref|YP_005417895.1| Rubredoxin [Rhodospirillum photometricum DSM 122]
gi|378403809|emb|CCG08925.1| Rubredoxin [Rhodospirillum photometricum DSM 122]
Length = 131
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 20/67 (29%)
Query: 69 FSMRVASKQAYIC--RDCG-YIYNER-----------------KPFDQLPDNYFCPVCGA 108
+ R S Q ++C DC YIY+ R PF+ LPD + CP+C
Sbjct: 62 WPARADSPQRWVCTNNDCEPYIYDPRLGDADNIAQPGHPIAPGTPFEALPDTWKCPLCAT 121
Query: 109 PKRRFRP 115
PK FRP
Sbjct: 122 PKSWFRP 128
>gi|317503337|ref|ZP_07961385.1| rubredoxin/rubredoxin reductase [Prevotella salivae DSM 15606]
gi|315665560|gb|EFV05179.1| rubredoxin/rubredoxin reductase [Prevotella salivae DSM 15606]
Length = 54
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ F+ +PD++ CP CG K F
Sbjct: 2 KKYVCDVCGYVYDPAVGDPDSGIAAGTAFEDIPDDWVCPTCGVTKEDF 49
>gi|345880462|ref|ZP_08832013.1| rubredoxin [Prevotella oulorum F0390]
gi|343923149|gb|EGV33842.1| rubredoxin [Prevotella oulorum F0390]
Length = 54
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ F+ +P+++ CPVCG K F
Sbjct: 2 KKYVCDVCGYIYDPAVGDPDSGIAAGTAFEDIPEDWVCPVCGVTKSDF 49
>gi|357590456|ref|ZP_09129122.1| high molecular weight rubredoxin [Corynebacterium nuruki S6-4]
Length = 63
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 73 VASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
+ + + C CGYIY+E K ++ +PD++ CP CGA K F
Sbjct: 6 ITDYKVWECAQCGYIYDESKGDPEEGFPPGTRWEDIPDDWECPDCGAAKADF 57
>gi|162606322|ref|XP_001713191.1| rubredoxin [Guillardia theta]
gi|4583668|emb|CAB40406.1| rubredoxin [Guillardia theta]
Length = 159
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
Y C CGYIY K PF L D++ CP C +PK +F+ +
Sbjct: 64 YECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRSPKNQFKSIKKVI 116
>gi|407010268|gb|EKE25211.1| rubrerythrin [uncultured bacterium]
Length = 166
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Query: 53 LSPPHQQQLLASAAP-KFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKR 111
+ HQ Q A+ A + + K+ ++C CG +++ +LPDN CP+C PK
Sbjct: 109 VEKVHQAQFKAALAKVEAGEDIDEKEYHVCSVCGNLFD-----GELPDN--CPICKVPKE 161
Query: 112 RF 113
+F
Sbjct: 162 KF 163
>gi|331092425|ref|ZP_08341250.1| rubredoxin [Lachnospiraceae bacterium 2_1_46FAA]
gi|330401268|gb|EGG80857.1| rubredoxin [Lachnospiraceae bacterium 2_1_46FAA]
Length = 52
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYVCEPCGYVYDPELGDPDGGIAPGTAFEDIPDDWVCPICGLGKDVF 49
>gi|374573060|ref|ZP_09646156.1| rubredoxin [Bradyrhizobium sp. WSM471]
gi|374421381|gb|EHR00914.1| rubredoxin [Bradyrhizobium sp. WSM471]
Length = 72
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERKPF-----------DQLPDNYFCPVCGAPKRRFR 114
+ ++C CG +Y+ER+ + + +PD + CP CGA K F+
Sbjct: 20 KTWMCALCGVVYSEREGWPHEGIPPGTRWEDVPDEWICPDCGADKSEFQ 68
>gi|210613574|ref|ZP_03289768.1| hypothetical protein CLONEX_01975 [Clostridium nexile DSM 1787]
gi|210151122|gb|EEA82130.1| hypothetical protein CLONEX_01975 [Clostridium nexile DSM 1787]
Length = 597
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYT 117
K+ ++C CGYIY D LPD++ CP+C F P +
Sbjct: 560 KKGFVCVVCGYIYEG----DVLPDDFICPLCKHGVADFEPIS 597
>gi|189485270|ref|YP_001956211.1| rubredoxin [uncultured Termite group 1 bacterium phylotype Rs-D17]
gi|170287229|dbj|BAG13750.1| rubredoxin [uncultured Termite group 1 bacterium phylotype Rs-D17]
Length = 50
Score = 39.3 bits (90), Expect = 0.59, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
C CGY+Y+ F+QLP+++ CP+CGAPK F
Sbjct: 6 CSACGYVYDPAVGLPEAGIALGTLFEQLPEDWVCPLCGAPKSTF 49
>gi|146296995|ref|YP_001180766.1| rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410571|gb|ABP67575.1| Rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 52
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
++C CGY Y+ +K F+ LPD++ CP+CG K F
Sbjct: 4 WVCTICGYEYDPQKGDPENGIQPGTKFEDLPDDWVCPICGVGKDMF 49
>gi|226946852|ref|YP_002801925.1| rubredoxin-type Fe(Cys)4 protein [Azotobacter vinelandii DJ]
gi|226721779|gb|ACO80950.1| Rubredoxin-type Fe(Cys)4 protein [Azotobacter vinelandii DJ]
Length = 55
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
C CG++Y+E P++++P ++ CPVCGA K+ F
Sbjct: 6 CIVCGFVYDEACGLPEEGIAPGTPWEEVPSDWLCPVCGASKQDF 49
>gi|434397925|ref|YP_007131929.1| Rubredoxin-type Fe(Cys)4 protein [Stanieria cyanosphaera PCC 7437]
gi|428269022|gb|AFZ34963.1| Rubredoxin-type Fe(Cys)4 protein [Stanieria cyanosphaera PCC 7437]
Length = 53
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFRP 115
Q Y C C YIY+ + F+ +PD+++CP CG K F P
Sbjct: 2 QKYQCTACQYIYDPEQGDPDSGIEPGTAFEDIPDDWYCPQCGVDKSMFEP 51
>gi|336425681|ref|ZP_08605700.1| hypothetical protein HMPREF0994_01706 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336011803|gb|EGN41744.1| hypothetical protein HMPREF0994_01706 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 218
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+P + ++ AP + K ++C+ CGY+Y D+LP ++ CPVCG +F
Sbjct: 161 APTYLPEVDGKDAPSTEEKKTGK--WVCQVCGYVYEG----DELPADFKCPVCGQGADKF 214
Query: 114 R 114
+
Sbjct: 215 K 215
>gi|254491999|ref|ZP_05105177.1| rubredoxin [Methylophaga thiooxidans DMS010]
gi|224462814|gb|EEF79085.1| rubredoxin [Methylophaga thiooxydans DMS010]
Length = 56
Score = 39.3 bits (90), Expect = 0.60, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+IC CG++Y+E + +D +PD++ CP CGA K F
Sbjct: 4 WICTVCGFVYDEAEGMPEEGIEPGTAWDDIPDDWVCPDCGAVKEDF 49
>gi|254169175|ref|ZP_04876011.1| rubredoxin, putative [Aciduliprofundum boonei T469]
gi|197621910|gb|EDY34489.1| rubredoxin, putative [Aciduliprofundum boonei T469]
Length = 168
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%), Gaps = 6/41 (14%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ K YIC CGY Y +P PD CPVCGAP+ +F
Sbjct: 131 IEEKSIYICPVCGYTYMGDEP----PDK--CPVCGAPQDKF 165
>gi|375083339|ref|ZP_09730364.1| Rubrerythrin [Thermococcus litoralis DSM 5473]
gi|374741968|gb|EHR78381.1| Rubrerythrin [Thermococcus litoralis DSM 5473]
Length = 171
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ K+ YIC CGY D+ P+ +CPVCGAP+ +F
Sbjct: 134 IEIKKVYICPVCGYT-----AIDEAPE--YCPVCGAPREKF 167
>gi|330506579|ref|YP_004383007.1| DJ-1/PfpI family/rubredoxin fusion protein [Methanosaeta concilii
GP6]
gi|328927387|gb|AEB67189.1| DJ-1/PfpI family/rubredoxin fusion protein [Methanosaeta concilii
GP6]
Length = 369
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
Query: 79 YICRDCGYIY----NERKPFDQLPDNYFCPVCGAPKRRF 113
+ C+ CGY+Y N+ F+ LP + CP CGAPK +F
Sbjct: 329 WRCKVCGYVYDPAENDGVAFEDLPGTWKCP-CGAPKSKF 366
>gi|340750193|ref|ZP_08687040.1| acyl-COA dehydrogenase [Fusobacterium mortiferum ATCC 9817]
gi|229419841|gb|EEO34888.1| acyl-COA dehydrogenase [Fusobacterium mortiferum ATCC 9817]
Length = 639
Score = 39.3 bits (90), Expect = 0.61, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 14/71 (19%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYN-----------ERKPFDQLPDNYF 102
+PP ++ + PK R +S + Y+C CGY Y+ E F++LP+ +
Sbjct: 567 APPMKK--MKRVVPK-PTRPSSWKRYVCGGCGYEYDPAIGDEENEIPEGTLFEKLPEEWI 623
Query: 103 CPVCGAPKRRF 113
CP CG K F
Sbjct: 624 CPDCGEEKTAF 634
>gi|270157611|ref|ZP_06186268.1| rubredoxin [Legionella longbeachae D-4968]
gi|289164015|ref|YP_003454153.1| Rubredoxin (Rd) [Legionella longbeachae NSW150]
gi|269989636|gb|EEZ95890.1| rubredoxin [Legionella longbeachae D-4968]
gi|288857188|emb|CBJ11006.1| Rubredoxin (Rd) [Legionella longbeachae NSW150]
Length = 60
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERKPFDQ-----------LPDNYFCPVCGAPKRRF 113
+ +IC CG+IY+E K + + +P+N+FCP CGA K F
Sbjct: 5 KKFICVICGFIYDEAKGWPEEGIEPGTRWVDVPENWFCPECGACKEDF 52
>gi|389843945|ref|YP_006346025.1| rubredoxin [Mesotoga prima MesG1.Ag.4.2]
gi|387858691|gb|AFK06782.1| rubredoxin [Mesotoga prima MesG1.Ag.4.2]
Length = 52
Score = 39.3 bits (90), Expect = 0.63, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGYIY+ F+ +P+++ CP+CGA K F P
Sbjct: 3 YRCTICGYIYDPEIGDPDNGVDPGTTFEDVPEDWVCPLCGASKDDFEP 50
>gi|239624751|ref|ZP_04667782.1| flavin reductase domain-containing protein FMN-binding
[Clostridiales bacterium 1_7_47_FAA]
gi|239521137|gb|EEQ61003.1| flavin reductase domain-containing protein FMN-binding
[Clostridiales bacterium 1_7_47FAA]
Length = 209
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 66 APKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
AP + Y C CGYI D LPD++ CPVCG F
Sbjct: 163 APSYQENAGRTVGYRCSVCGYILES----DTLPDDFICPVCGKDASYF 206
>gi|434388880|ref|YP_007099491.1| rubredoxin [Chamaesiphon minutus PCC 6605]
gi|428019870|gb|AFY95964.1| rubredoxin [Chamaesiphon minutus PCC 6605]
Length = 132
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 11/62 (17%)
Query: 63 ASAAPKFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKR 111
A+PK + + CR CGY Y+ K PF LP + CP CGA K
Sbjct: 20 GDASPKVAPGTTDDDRFECRACGYTYDPNKGDPKNKIIAGTPFTVLPVTWKCPTCGAKKG 79
Query: 112 RF 113
F
Sbjct: 80 AF 81
>gi|78043634|ref|YP_361388.1| rubredoxin [Carboxydothermus hydrogenoformans Z-2901]
gi|77995749|gb|ABB14648.1| rubredoxin [Carboxydothermus hydrogenoformans Z-2901]
Length = 52
Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ PF+ LP ++ CP CGA K F
Sbjct: 4 YVCSICGYVYDPEVGDESQGIAPGTPFENLPADWVCPDCGADKDAF 49
>gi|402573155|ref|YP_006622498.1| rubredoxin [Desulfosporosinus meridiei DSM 13257]
gi|402254352|gb|AFQ44627.1| rubredoxin [Desulfosporosinus meridiei DSM 13257]
Length = 53
Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYVCSACGYIYDPEAGDPDSGIAPGTAFEDIPDDWVCPLCGVGKDMF 49
>gi|346313400|ref|ZP_08854930.1| hypothetical protein HMPREF9022_00587 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345898313|gb|EGX68194.1| hypothetical protein HMPREF9022_00587 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 466
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 79 YICRDCGYIYN---ERKPFDQLPDNYFCPVCGAPKRRFRPYTP----AVTRGANDT---A 128
Y+C CGY+Y+ E + L + CP+C APK F+ + T +ND A
Sbjct: 3 YVCEICGYMYDEAVEGTSWVNLDSTWKCPLCTAPKECFKKVASEEDASATSKSNDATSLA 62
Query: 129 VRKARKEQ 136
++K K++
Sbjct: 63 IQKNTKKE 70
>gi|295092821|emb|CBK78928.1| Rubredoxin [Clostridium cf. saccharolyticum K10]
gi|295114636|emb|CBL35483.1| Rubredoxin [butyrate-producing bacterium SM4/1]
Length = 53
Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ E P F+ +P+++ CP+CG K +F
Sbjct: 2 KKYVCDVCGYIYDPAEGDPDNGVAAGTAFEDIPESWVCPLCGVGKDQF 49
>gi|291546553|emb|CBL19661.1| Uncharacterized flavoproteins [Ruminococcus sp. SR1/5]
Length = 597
Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
K+ ++C+ CGYIY D+LP++ CP+C F P
Sbjct: 559 KKGWVCKVCGYIYEG----DELPEDIICPLCKHGAVDFEP 594
>gi|451823332|ref|YP_007459606.1| rubredoxin [Candidatus Kinetoplastibacterium desouzaii TCC079E]
gi|451776132|gb|AGF47173.1| rubredoxin [Candidatus Kinetoplastibacterium desouzaii TCC079E]
Length = 54
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRF 113
+ +IC CG+IY+E + +D +P N+ CP CGA K F
Sbjct: 2 RTWICLVCGWIYDENVGCPEEGIAPKTKWDDVPPNWVCPECGARKEDF 49
>gi|428306921|ref|YP_007143746.1| rubredoxin-type Fe(Cys)4 protein [Crinalium epipsammum PCC 9333]
gi|428248456|gb|AFZ14236.1| Rubredoxin-type Fe(Cys)4 protein [Crinalium epipsammum PCC 9333]
Length = 53
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
YIC CGY+Y+ + F+ +P+++ CPVC A K F
Sbjct: 4 YICTICGYVYDPEQGDPDSGIEPGTAFEDIPEDWVCPVCKATKEDF 49
>gi|303248760|ref|ZP_07335012.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio fructosovorans JJ]
gi|302489847|gb|EFL49776.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio fructosovorans JJ]
Length = 52
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y C CGY+Y+ F+ +P+++ CPVCGAPK F
Sbjct: 4 YECSICGYVYDPAAGDPDNGVAPGTKFEDIPEDWVCPVCGAPKSEF 49
>gi|386400398|ref|ZP_10085176.1| rubredoxin [Bradyrhizobium sp. WSM1253]
gi|385741024|gb|EIG61220.1| rubredoxin [Bradyrhizobium sp. WSM1253]
Length = 72
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERKPF-----------DQLPDNYFCPVCGAPKRRFR 114
+ ++C CG +Y+ER+ + + +PD + CP CGA K F+
Sbjct: 20 KTWMCALCGVVYSEREGWPDEGIPPGTRWEDVPDEWICPDCGADKSEFQ 68
>gi|291514475|emb|CBK63685.1| Superoxide dismutase [Alistipes shahii WAL 8301]
Length = 241
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
Y C C Y+Y+ K PF+++PD++ CP+CG K F
Sbjct: 191 YKCTACDYVYDPAKGDPETGIEPGTPFEEIPDDWTCPICGLYKTDFE 237
>gi|167771425|ref|ZP_02443478.1| hypothetical protein ANACOL_02791 [Anaerotruncus colihominis DSM
17241]
gi|167666065|gb|EDS10195.1| rubredoxin [Anaerotruncus colihominis DSM 17241]
Length = 53
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+E K ++ +PD++ CP CG K F
Sbjct: 2 KKYVCTICGFVYDEEKGLPDEGIAPGTKWEDVPDDFVCPECGVGKDMF 49
>gi|91203415|emb|CAJ71068.1| strongly similar to rubredoxin [Candidatus Kuenenia
stuttgartiensis]
Length = 52
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY+ F LPD++ CP CGAPK +F
Sbjct: 2 ERYKCLVCGYIYDPSSGDPDHGIDPGTSFQNLPDDWTCPPCGAPKEQF 49
>gi|365839285|ref|ZP_09380530.1| rubredoxin [Anaeroglobus geminatus F0357]
gi|364565313|gb|EHM43045.1| rubredoxin [Anaeroglobus geminatus F0357]
Length = 52
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY+E + + LP+++ CPVCGA K F
Sbjct: 2 EKYECTVCGYIYDEAEGDPDNGVAAGTKWADLPESWVCPVCGADKDAF 49
>gi|339441998|ref|YP_004708003.1| hypothetical protein CXIVA_09340 [Clostridium sp. SY8519]
gi|338901399|dbj|BAK46901.1| hypothetical protein CXIVA_09340 [Clostridium sp. SY8519]
Length = 182
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAND-TAVRKARKEQI 137
++C CGY+Y D LP ++ CPVC AP +F + A V + E I
Sbjct: 4 FVCSVCGYVY----EGDSLPADFTCPVCKAPASKFTEQKGEMEWAAEHVVGVAQGASEDI 59
Query: 138 QRD 140
D
Sbjct: 60 MAD 62
>gi|302530423|ref|ZP_07282765.1| alkane 1-monooxygenase [Streptomyces sp. AA4]
gi|302439318|gb|EFL11134.1| alkane 1-monooxygenase [Streptomyces sp. AA4]
Length = 466
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 32/135 (23%)
Query: 6 PTRALSTTNSSTPPPLLAPTGNNAGL----------RRPADRFALKSSFSAPSLHLLLSP 55
PTR T P+L PTG AG+ RR D+ L + F + P
Sbjct: 324 PTRRYQTLRDFAESPVL-PTGY-AGMIVLALFPPLWRRVMDQRVL-NHFDGDLSRANIQP 380
Query: 56 PHQQQLLA---SAAPK-----FSMRVASKQAYICRDCGYIYNERK-----------PFDQ 96
++++LA ++AP +R + + +C CGY+Y+E++ P+
Sbjct: 381 SKREKILARYGTSAPAPVAVLDDVRGDASEGGMCPGCGYVYDEQRGDPREGFPAGTPWSS 440
Query: 97 LPDNYFCPVCGAPKR 111
+PD++ CP CG ++
Sbjct: 441 IPDSWCCPDCGVREK 455
>gi|254166492|ref|ZP_04873346.1| rubredoxin [Aciduliprofundum boonei T469]
gi|254168987|ref|ZP_04875826.1| rubredoxin [Aciduliprofundum boonei T469]
gi|289596550|ref|YP_003483246.1| Rubredoxin-type Fe(Cys)4 protein [Aciduliprofundum boonei T469]
gi|197622093|gb|EDY34669.1| rubredoxin [Aciduliprofundum boonei T469]
gi|197624102|gb|EDY36663.1| rubredoxin [Aciduliprofundum boonei T469]
gi|289534337|gb|ADD08684.1| Rubredoxin-type Fe(Cys)4 protein [Aciduliprofundum boonei T469]
Length = 52
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
C CGYIY+ F++LP+++ CPVCGA K F
Sbjct: 5 CMVCGYIYDPEVGDPDSGVPAGTSFEELPEDWVCPVCGASKDMF 48
>gi|218782254|ref|YP_002433572.1| rubrerythrin [Desulfatibacillum alkenivorans AK-01]
gi|218763638|gb|ACL06104.1| Rubrerythrin [Desulfatibacillum alkenivorans AK-01]
Length = 168
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 7/42 (16%)
Query: 77 QAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTP 118
+ ++C+ CGY+ +++ P D CPVCGAPK +F+ +P
Sbjct: 134 EYHVCQVCGYVTDKKAP-DA------CPVCGAPKEKFKTVSP 168
>gi|312127507|ref|YP_003992381.1| rubredoxin-type fe(cys)4 protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777526|gb|ADQ07012.1| Rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 55
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ ++C CGY YN F+ LPD++ CP+CG K F
Sbjct: 5 EIWVCSICGYEYNPENGDPENGIAPGTKFEDLPDDWVCPICGVGKDMF 52
>gi|224542294|ref|ZP_03682833.1| hypothetical protein CATMIT_01469 [Catenibacterium mitsuokai DSM
15897]
gi|224524836|gb|EEF93941.1| rubredoxin [Catenibacterium mitsuokai DSM 15897]
Length = 198
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
++C+ CG++Y D+LP++ CP+C P F P
Sbjct: 164 GWVCKICGWVYEG----DELPEDLICPICKHPASDFEP 197
>gi|222529432|ref|YP_002573314.1| rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor bescii DSM
6725]
gi|312622334|ref|YP_004023947.1| rubredoxin-type fe(cys)4 protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312793620|ref|YP_004026543.1| rubredoxin-type fe(cys)4 protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|344996099|ref|YP_004798442.1| rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|222456279|gb|ACM60541.1| Rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor bescii DSM
6725]
gi|312180760|gb|ADQ40930.1| Rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312202801|gb|ADQ46128.1| Rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|343964318|gb|AEM73465.1| Rubredoxin-type Fe(Cys)4 protein [Caldicellulosiruptor
lactoaceticus 6A]
Length = 52
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ ++C CGY YN F+ LPD++ CP+CG K F
Sbjct: 2 EIWVCSICGYEYNPENGDPENGIAPGTKFEDLPDDWVCPICGVGKDMF 49
>gi|374340703|ref|YP_005097439.1| rubredoxin [Marinitoga piezophila KA3]
gi|372102237|gb|AEX86141.1| rubredoxin [Marinitoga piezophila KA3]
Length = 53
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ E P F+ LP+++ CP+CG K F
Sbjct: 2 KKYVCTVCGYIYDPEEGDPTAGIPAGTSFEDLPEDWVCPMCGVGKDLF 49
>gi|258514987|ref|YP_003191209.1| rubredoxin-type Fe(Cys)4 protein [Desulfotomaculum acetoxidans DSM
771]
gi|257778692|gb|ACV62586.1| Rubredoxin-type Fe(Cys)4 protein [Desulfotomaculum acetoxidans DSM
771]
Length = 54
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 9/45 (20%)
Query: 79 YICRDCGYIYNER---------KPFDQLPDNYFCPVCGAPKRRFR 114
++C CGY+Y+ PF++LP+++ CP C A K +F+
Sbjct: 4 WVCELCGYVYDPAVGAEGVDPGTPFEELPEDWECPECLASKDKFK 48
>gi|298490487|ref|YP_003720664.1| rubredoxin-type Fe(Cys)4 protein ['Nostoc azollae' 0708]
gi|298232405|gb|ADI63541.1| Rubredoxin-type Fe(Cys)4 protein ['Nostoc azollae' 0708]
Length = 114
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
Y CR CGY+Y K F +LP N+ CPVC A K F
Sbjct: 17 YECRSCGYVYEPEKGDDKYDIPAGTVFSELPVNWRCPVCSAKKVAF 62
>gi|451343451|ref|ZP_21912523.1| hypothetical protein HMPREF9943_00748 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337814|gb|EMD16970.1| hypothetical protein HMPREF9943_00748 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 596
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 22/31 (70%), Gaps = 4/31 (12%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVC 106
K+ ++C+ CGY+Y ++LPD++ CP+C
Sbjct: 559 KKGWVCKVCGYVYEG----EELPDDFICPLC 585
>gi|295108368|emb|CBL22321.1| Rubredoxin [Ruminococcus obeum A2-162]
Length = 54
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGYIY+ F+ +PD++ CP+CG K F P
Sbjct: 4 YECEPCGYIYDSAVGDPDAGIDPETAFEDIPDDWTCPICGLGKDVFVP 51
>gi|218248866|ref|YP_002374237.1| rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 8801]
gi|257061928|ref|YP_003139816.1| rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 8802]
gi|218169344|gb|ACK68081.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 8801]
gi|256592094|gb|ACV02981.1| Rubredoxin-type Fe(Cys)4 protein [Cyanothece sp. PCC 8802]
Length = 115
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 11/44 (25%)
Query: 81 CRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
CR CGY+Y +K PF+ LP + CPVCGA +F
Sbjct: 20 CRLCGYVYEPKKGDAKGNIDPGTPFEDLPITWRCPVCGARSNQF 63
>gi|19704756|ref|NP_604318.1| acyl-COA dehydrogenase, short-chain specific [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296328472|ref|ZP_06870992.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19715082|gb|AAL95617.1| ACYL-COA dehydrogenase, short-chain specific [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|296154378|gb|EFG95176.1| butyryl-CoA dehydrogenase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 636
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 16/68 (23%)
Query: 54 SPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNER--------KP---FDQLPDNYF 102
+PP ++ + PK V S Y+C CG+ YN KP F LP+++
Sbjct: 567 APPMKK--MKRVIPKV---VYSPHVYVCSGCGHEYNPEIGDEDSDIKPGTRFKDLPEDWT 621
Query: 103 CPVCGAPK 110
CP CG PK
Sbjct: 622 CPDCGDPK 629
>gi|189346757|ref|YP_001943286.1| rubredoxin-type Fe(Cys)4 protein [Chlorobium limicola DSM 245]
gi|189340904|gb|ACD90307.1| Rubredoxin-type Fe(Cys)4 protein [Chlorobium limicola DSM 245]
Length = 55
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 81 CRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRFRP 115
CR+CGY+Y+ E P FD+LP + CPVC P+ F P
Sbjct: 7 CRECGYLYDPAEGDPDCRIPPGTLFDELPHLWCCPVCNEPQSNFEP 52
>gi|330837740|ref|YP_004412381.1| rubredoxin-type Fe(Cys)4 protein [Sphaerochaeta coccoides DSM
17374]
gi|329749643|gb|AEC02999.1| Rubredoxin-type Fe(Cys)4 protein [Sphaerochaeta coccoides DSM
17374]
Length = 54
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGYIY+ F +PD++ CP CGA K F P
Sbjct: 2 KKYVCDLCGYIYDPADGDPDGGVAAGTAFADIPDDWVCPECGAGKDDFSP 51
>gi|340758198|ref|ZP_08694789.1| rubredoxin [Fusobacterium varium ATCC 27725]
gi|251835113|gb|EES63656.1| rubredoxin [Fusobacterium varium ATCC 27725]
Length = 52
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
+ Y C+ CGYIY+ E P F+ +PD++ CP+CG K F
Sbjct: 2 KKYECKVCGYIYDPVEGDPDSGIAPGTAFEDIPDDWVCPLCGVGKDDF 49
>gi|384103005|ref|ZP_10003987.1| rubredoxin [Rhodococcus imtechensis RKJ300]
gi|38524450|dbj|BAD02373.1| rubredoxin [Rhodococcus opacus]
gi|325512093|gb|ADZ23257.1| rubredoxin [Gordonia sp. CC-NAPH129-6]
gi|383839480|gb|EID78832.1| rubredoxin [Rhodococcus imtechensis RKJ300]
Length = 86
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPA 119
+ +IC C +Y+ + F +PD++ CPVCGA K+ FR P
Sbjct: 17 ELWICEVCEDVYDPQLGDPDGGIPPGTAFQDIPDDWVCPVCGARKKEFRKLRPG 70
>gi|317476418|ref|ZP_07935667.1| rubredoxin [Bacteroides eggerthii 1_2_48FAA]
gi|316907444|gb|EFV29149.1| rubredoxin [Bacteroides eggerthii 1_2_48FAA]
Length = 53
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ YIC C Y+Y+ + F+ LPD++ CP+CG K F
Sbjct: 2 EKYICTICEYVYDPEQGDPENGIEPGTAFEDLPDDWVCPLCGVGKDEF 49
>gi|307244724|ref|ZP_07526826.1| rubredoxin [Peptostreptococcus stomatis DSM 17678]
gi|306491901|gb|EFM63952.1| rubredoxin [Peptostreptococcus stomatis DSM 17678]
Length = 53
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+ PF+ +PD++ CP CG K F
Sbjct: 2 KKYVCDVCGWVYDPEIGDPDSGIAPGTPFEDIPDDWECPDCGVTKEDF 49
>gi|225019980|ref|ZP_03709172.1| hypothetical protein CLOSTMETH_03941 [Clostridium methylpentosum
DSM 5476]
gi|224947344|gb|EEG28553.1| hypothetical protein CLOSTMETH_03941 [Clostridium methylpentosum
DSM 5476]
Length = 53
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
++C CG++Y+ + PF+ LP++Y CP+CG K F
Sbjct: 4 WVCSVCGFVYDPAEGAPDLGIEPGTPFEDLPEDYVCPLCGVGKDMF 49
>gi|146305479|ref|YP_001185944.1| rubredoxin-type Fe(Cys)4 protein [Pseudomonas mendocina ymp]
gi|145573680|gb|ABP83212.1| Rubredoxin-type Fe(Cys)4 protein [Pseudomonas mendocina ymp]
Length = 177
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPY 116
+IC CG+IY+E F+ +PD++ CP CGA K + Y
Sbjct: 126 WICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATKEDYVLY 174
>gi|157836996|pdb|4RXN|A Chain A, Crystallographic Refinement Of Rubredoxin At 1.2 Angstroms
Resolution
gi|157837076|pdb|5RXN|A Chain A, Combined Crystallographic Refinement And Energy
Minimization Of Rubredoxin At 1.2 Angstrom Resolution
Length = 54
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY-----------NERKPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY N F +PD++ CP+CG K F
Sbjct: 2 KKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVGKDEF 49
>gi|148907449|gb|ABR16857.1| unknown [Picea sitchensis]
Length = 225
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 73 VASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
V + Y C CGYIY++ F +LP+++ CP CGA K F
Sbjct: 124 VLNTGKYECTSCGYIYDQSLGDPLYPVAPGLEFSRLPEDWRCPTCGAAKSYF 175
>gi|373122396|ref|ZP_09536259.1| hypothetical protein HMPREF0982_01188 [Erysipelotrichaceae
bacterium 21_3]
gi|371663473|gb|EHO28661.1| hypothetical protein HMPREF0982_01188 [Erysipelotrichaceae
bacterium 21_3]
Length = 123
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
++C CGY Y++ PF++LP+ + CP CG K +F
Sbjct: 73 HVCNGCGYEYDQMLGDPENDIAPGTPFEKLPEEWICPECGEAKDQF 118
>gi|320354688|ref|YP_004196027.1| rubredoxin-type Fe(Cys)4 protein [Desulfobulbus propionicus DSM
2032]
gi|320123190|gb|ADW18736.1| Rubredoxin-type Fe(Cys)4 protein [Desulfobulbus propionicus DSM
2032]
Length = 57
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 11/54 (20%)
Query: 73 VASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ + YIC +CGYIY PF++LP + CP+C A + +F P
Sbjct: 2 TTANERYICANCGYIYAPSAGDSMNNIPPGTPFEELPPEWVCPMCYASQDQFDP 55
>gi|295688639|ref|YP_003592332.1| rubredoxin-type Fe(Cys)4 protein [Caulobacter segnis ATCC 21756]
gi|295430542|gb|ADG09714.1| Rubredoxin-type Fe(Cys)4 protein [Caulobacter segnis ATCC 21756]
Length = 59
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
+ + CR CGYIY+E + + +P + CP+CG PK F
Sbjct: 7 KVWQCRTCGYIYDEEQGDPAEGLAPGTRWADIPAGWICPMCGTPKSDF 54
>gi|188586977|ref|YP_001918522.1| rubrerythrin [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351664|gb|ACB85934.1| Rubrerythrin [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 182
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 7/37 (18%)
Query: 80 ICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPY 116
+C CGY E +PD +CP+CGAP+ RF+ Y
Sbjct: 153 VCGKCGYTTTE-----GVPD--YCPICGAPRNRFKSY 182
>gi|428769078|ref|YP_007160868.1| rubredoxin-type Fe(Cys)4 protein [Cyanobacterium aponinum PCC
10605]
gi|428683357|gb|AFZ52824.1| Rubredoxin-type Fe(Cys)4 protein [Cyanobacterium aponinum PCC
10605]
Length = 115
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 50/125 (40%), Gaps = 31/125 (24%)
Query: 53 LSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIYNERKP-----------FDQLPDNY 101
+S +++ LA AP +Y CR CGY Y K F LP N+
Sbjct: 1 MSEAGKEKTLAEQAPP---------SYECRSCGYTYVPSKGDSKTNIPPGTLFTDLPSNW 51
Query: 102 FCPVCGAPKRRFRPYTPAVTRGANDTAVRKARKEQIQRDEAIGKALPIA---IAVAAVAL 158
CPVCGA + F V GA D A E + + + P + +A+AL
Sbjct: 52 RCPVCGASRTVF------VNVGAIDAPSGFA--ENLDYGFGVNRLTPGQKNLLIFSALAL 103
Query: 159 AGLYF 163
L+F
Sbjct: 104 GVLFF 108
>gi|298711432|emb|CBJ32572.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 159
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 5/107 (4%)
Query: 11 STTNSSTPPPLLAPTGNNAGLRRPADRFALKSSFSAPSLHLLLSPPHQQQLLASAAPKFS 70
++ N P P G A R A +SS S + S P ++ +A + +
Sbjct: 14 ASVNGFVPAPAAFSKGQFAS-RAAASSQVARSSISPRTGVSSASNPGVGVMMMAAKAEEA 72
Query: 71 MRVASKQAYICRDCGYIYNERKP----FDQLPDNYFCPVCGAPKRRF 113
R + ++C DCGYIY+ ++ + CP C P+RRF
Sbjct: 73 TRSFWEGEWVCADCGYIYDIDDCGGLYLEEQKRGFVCPQCRGPRRRF 119
>gi|399886916|ref|ZP_10772793.1| Rubredoxin [Clostridium arbusti SL206]
Length = 54
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIYN F +P+++ CP+CG K +F
Sbjct: 2 KKYTCTVCGYIYNPEDGDPDNGVNPGTAFQDIPEDWVCPLCGVGKDQF 49
>gi|292669454|ref|ZP_06602880.1| high molecular weight rubredoxin [Selenomonas noxia ATCC 43541]
gi|292648907|gb|EFF66879.1| high molecular weight rubredoxin [Selenomonas noxia ATCC 43541]
Length = 59
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Query: 75 SKQAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFR 114
S + ++C CG++Y+E F+ LP+++ CP+CG K F
Sbjct: 6 SMKKWVCTVCGWVYDEAVGDPDYDLAAGVAFEDLPEDFVCPLCGVDKWLFE 56
>gi|373460078|ref|ZP_09551838.1| rubredoxin [Prevotella maculosa OT 289]
gi|371956873|gb|EHO74650.1| rubredoxin [Prevotella maculosa OT 289]
Length = 54
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ F+ +PD++ CP CG K F
Sbjct: 2 KKYVCDVCGYIYDPAVGDPDGGIAPGTAFEDIPDDWVCPTCGVTKDDF 49
>gi|355571349|ref|ZP_09042601.1| Rubredoxin-type Fe(Cys)4 protein [Methanolinea tarda NOBI-1]
gi|354825737|gb|EHF09959.1| Rubredoxin-type Fe(Cys)4 protein [Methanolinea tarda NOBI-1]
Length = 135
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 68 KFSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVC 106
K+ YIC CGY+Y++ + PF+ LPD+Y CP+C
Sbjct: 62 KWGFEEWVPTKYICVVCGYVYDKDRGEPHRGIKPGTPFEDLPDDYTCPIC 111
>gi|154504500|ref|ZP_02041238.1| hypothetical protein RUMGNA_02004 [Ruminococcus gnavus ATCC 29149]
gi|336434384|ref|ZP_08614180.1| rubredoxin-2 [Lachnospiraceae bacterium 2_1_58FAA]
gi|153794982|gb|EDN77402.1| rubredoxin [Ruminococcus gnavus ATCC 29149]
gi|336013930|gb|EGN43799.1| rubredoxin-2 [Lachnospiraceae bacterium 2_1_58FAA]
Length = 53
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ F+ +P+++ CP+CG K F
Sbjct: 2 KKYLCEACGYIYDPEVGDPDNGVEAGTAFEDIPEDWLCPLCGLGKDAF 49
>gi|295110480|emb|CBL24433.1| Uncharacterized flavoproteins [Ruminococcus obeum A2-162]
Length = 596
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
K+ ++C+ CGY+Y D+LP++ CP+C F P
Sbjct: 559 KKGFVCKVCGYVYEG----DELPEDIICPLCKHGAVDFEP 594
>gi|340793093|ref|YP_004758556.1| high molecular weight rubredoxin [Corynebacterium variabile DSM
44702]
gi|340533003|gb|AEK35483.1| high molecular weight rubredoxin [Corynebacterium variabile DSM
44702]
Length = 63
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 73 VASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
+ + + C CGYIY+E K ++ +PD++ CP CGA K F
Sbjct: 6 ITDYKIWECAQCGYIYDESKGDPEEGFPPGTRWEDIPDDWECPDCGAAKADF 57
>gi|293402114|ref|ZP_06646253.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304506|gb|EFE45756.1| butyryl-CoA dehydrogenase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 633
Score = 38.9 bits (89), Expect = 0.78, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 11/50 (22%)
Query: 75 SKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
S + YIC CGY Y+ FD+LP+ + CP CG K F
Sbjct: 580 SYKRYICSGCGYEYDMEIGDPASDVPAGTAFDKLPEEWICPECGEEKENF 629
>gi|392415229|ref|YP_006451834.1| rubredoxin [Mycobacterium chubuense NBB4]
gi|270268857|gb|ACZ65963.1| putative rubredoxin [Mycobacterium chubuense NBB4]
gi|390615005|gb|AFM16155.1| rubredoxin [Mycobacterium chubuense NBB4]
Length = 62
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 11/55 (20%)
Query: 71 MRVASKQAYICRDCGYIYNERKPF-----------DQLPDNYFCPVCGAPKRRFR 114
M + ++C CG+ Y+E K + D +PD++ CP CGA K F
Sbjct: 1 MTDTDYKLFVCVQCGFTYDEAKGWPEDGIAPGTRWDDIPDDWSCPDCGAAKSDFE 55
>gi|34763803|ref|ZP_00144716.1| ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC; ELECTRON TRANSFER
FLAVOPROTEIN ALPHA-SUBUNIT; RUBREDOXIN [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27886427|gb|EAA23689.1| ACYL-COA DEHYDROGENASE, SHORT-CHAIN SPECIFIC [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 479
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 73 VASKQAYICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRF 113
V S Y+C CG+ YN + KP F LP+++ CP CG PK +
Sbjct: 423 VYSPHVYVCSGCGHEYNPDLGDEDSDIKPGTRFKDLPEDWTCPDCGDPKSGY 474
>gi|384109140|ref|ZP_10010023.1| hypothetical protein MSI_15830 [Treponema sp. JC4]
gi|383869271|gb|EID84887.1| hypothetical protein MSI_15830 [Treponema sp. JC4]
Length = 207
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Query: 78 AYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRP 115
A+ C+ CGY+Y +LP ++ CP+CG P F P
Sbjct: 170 AWKCKICGYVYEGS----ELPADFECPICGHPAEDFEP 203
>gi|326202303|ref|ZP_08192172.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium papyrosolvens DSM
2782]
gi|325987421|gb|EGD48248.1| Rubredoxin-type Fe(Cys)4 protein [Clostridium papyrosolvens DSM
2782]
Length = 52
Score = 38.9 bits (89), Expect = 0.80, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
Y+C CGY+Y+ E P F+ +PD + CP+CG K F
Sbjct: 4 YVCTVCGYVYDPEEGDPDSGIAPGTAFEDIPDEWVCPLCGVGKDMF 49
>gi|212702947|ref|ZP_03311075.1| hypothetical protein DESPIG_00984 [Desulfovibrio piger ATCC 29098]
gi|212673535|gb|EEB34018.1| rubredoxin [Desulfovibrio piger ATCC 29098]
Length = 62
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 11/43 (25%)
Query: 83 DCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+CGY+Y+ + F+ LPD++ CPVCGA K+ FR
Sbjct: 14 NCGYVYDPDRGDKRHKIPAGTKFEDLPDDWRCPVCGAAKKSFR 56
>gi|404485558|ref|ZP_11020755.1| rubredoxin [Barnesiella intestinihominis YIT 11860]
gi|404338246|gb|EJZ64693.1| rubredoxin [Barnesiella intestinihominis YIT 11860]
Length = 54
Score = 38.9 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYT 117
+ YIC C ++Y+ PF+ +PD++ CPVCG K F T
Sbjct: 2 KKYICTACEWVYDPAVGDPDGGIAPGTPFEDIPDDWVCPVCGLGKDAFEEVT 53
>gi|373451406|ref|ZP_09543330.1| hypothetical protein HMPREF0984_00372 [Eubacterium sp. 3_1_31]
gi|371968541|gb|EHO85997.1| hypothetical protein HMPREF0984_00372 [Eubacterium sp. 3_1_31]
Length = 633
Score = 38.9 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 11/50 (22%)
Query: 75 SKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
S + YIC CGY Y+ FD+LP+ + CP CG K F
Sbjct: 580 SYKRYICSGCGYEYDMEIGDPASDVPAGTTFDKLPEEWICPECGEEKENF 629
>gi|373107099|ref|ZP_09521399.1| hypothetical protein HMPREF9623_01063 [Stomatobaculum longum]
gi|371652038|gb|EHO17464.1| hypothetical protein HMPREF9623_01063 [Stomatobaculum longum]
Length = 52
Score = 38.9 bits (89), Expect = 0.81, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
YIC CGY+Y+E ++ +P+++ CP+CG K F
Sbjct: 3 YICNVCGYVYDETTGDPDNGIAAGTKWEDVPEDFVCPLCGVGKDEF 48
>gi|375137616|ref|YP_004998265.1| rubredoxin [Mycobacterium rhodesiae NBB3]
gi|359818237|gb|AEV71050.1| rubredoxin [Mycobacterium rhodesiae NBB3]
Length = 60
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 73 VASKQAYICRDCGYIYNERKPF-----------DQLPDNYFCPVCGAPKRRFR 114
++ + +IC CG+ Y+E K + D +PD++ CP CGA K F
Sbjct: 1 MSDYKLFICVQCGFEYDEEKGWPEDGIAPGTRWDDIPDDWSCPDCGAAKADFE 53
>gi|395646041|ref|ZP_10433901.1| Rubredoxin-type Fe(Cys)4 protein [Methanofollis liminatans DSM
4140]
gi|395442781|gb|EJG07538.1| Rubredoxin-type Fe(Cys)4 protein [Methanofollis liminatans DSM
4140]
Length = 127
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 11/41 (26%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGA 108
YIC+ CGYIY+ + F+ LP++Y CPVCGA
Sbjct: 7 YICKYCGYIYSPLRGEPHRGIPAGTEFEDLPEDYICPVCGA 47
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 69 FSMRVASKQAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCG 107
+ + ++C+ CGY+Y+E++ FD L ++Y CPVCG
Sbjct: 56 WGFELWEPTRFVCKICGYVYDEKRGEPHRGIPPGTKFDDLAEDYTCPVCG 105
>gi|317057493|ref|YP_004105960.1| flavin reductase domain-containing FMN-binding protein
[Ruminococcus albus 7]
gi|315449762|gb|ADU23326.1| flavin reductase domain protein FMN-binding protein [Ruminococcus
albus 7]
Length = 256
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 77 QAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
+ ++C CGY+Y LP++Y CPVCG +F+
Sbjct: 221 EKWVCEVCGYVYE-----GALPEDYVCPVCGVGADQFK 253
>gi|404447812|ref|ZP_11012806.1| rubredoxin-type Fe(Cys)4 protein [Indibacter alkaliphilus LW1]
gi|403766398|gb|EJZ27270.1| rubredoxin-type Fe(Cys)4 protein [Indibacter alkaliphilus LW1]
Length = 485
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 16/86 (18%)
Query: 45 SAPSLHLLLSPPHQQQLLASA-----APKFSMRVASKQAYICRDCGYIYNERK------- 92
+ P+L L LS + QL + P S Y C C IY+E+
Sbjct: 398 TIPALLLQLSYKYYDQLNVKSLNTQKKPDNKKNTDSSNKYQCSSCLTIYDEKLGDRINGI 457
Query: 93 ----PFDQLPDNYFCPVCGAPKRRFR 114
F +LP +Y CPVC +PK +R
Sbjct: 458 APGFEFSKLPSDYCCPVCESPKSAYR 483
>gi|336430332|ref|ZP_08610284.1| hypothetical protein HMPREF0994_06290 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336000055|gb|EGN30209.1| hypothetical protein HMPREF0994_06290 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 180
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 7/63 (11%)
Query: 79 YICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAVTRGAND-TAVRKARKEQI 137
++C+ CGY+Y K P+ CPVCGAP +F + + A V + E I
Sbjct: 3 FVCQVCGYVYEGEKA----PEK--CPVCGAPAEKFTAQSGKMEWAAEHVVGVAQGASEDI 56
Query: 138 QRD 140
D
Sbjct: 57 MED 59
>gi|307564931|ref|ZP_07627451.1| rubredoxin [Prevotella amnii CRIS 21A-A]
gi|307346371|gb|EFN91688.1| rubredoxin [Prevotella amnii CRIS 21A-A]
Length = 53
Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGY+Y+ PF+ +P+++ CP+CG K F
Sbjct: 2 KKYECEPCGYVYDPEVGDPDGGIAPGTPFEDIPEDWVCPICGLGKEVF 49
>gi|194098484|ref|YP_002001544.1| rebredoxin [Neisseria gonorrhoeae NCCP11945]
gi|291043943|ref|ZP_06569659.1| rebredoxin [Neisseria gonorrhoeae DGI2]
gi|293399146|ref|ZP_06643311.1| rubredoxin [Neisseria gonorrhoeae F62]
gi|193933774|gb|ACF29598.1| rebredoxin [Neisseria gonorrhoeae NCCP11945]
gi|291012406|gb|EFE04395.1| rebredoxin [Neisseria gonorrhoeae DGI2]
gi|291610560|gb|EFF39670.1| rubredoxin [Neisseria gonorrhoeae F62]
Length = 84
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
Query: 65 AAPKFSMRVASKQA-YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRR 112
AA K ++ A Y+C CG+IY+E F+ +PD++ CP CG K
Sbjct: 17 AAKKHGTNKETQMAQYMCGPCGWIYDEELGDPEHGIAPGTKFEDIPDDWKCPECGVGKED 76
Query: 113 F 113
F
Sbjct: 77 F 77
>gi|153813076|ref|ZP_01965744.1| hypothetical protein RUMOBE_03484 [Ruminococcus obeum ATCC 29174]
gi|149830878|gb|EDM85968.1| rubredoxin [Ruminococcus obeum ATCC 29174]
Length = 56
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRP 115
Y C CGYIY+ F+ +PD++ CP+CG K F P
Sbjct: 6 YECEPCGYIYDPAVGDSDAGIEPETAFEDIPDDWTCPICGLGKDVFVP 53
>gi|228999883|ref|ZP_04159455.1| hypothetical protein bmyco0003_44360 [Bacillus mycoides Rock3-17]
gi|229007437|ref|ZP_04165034.1| hypothetical protein bmyco0002_43160 [Bacillus mycoides Rock1-4]
gi|228753825|gb|EEM03266.1| hypothetical protein bmyco0002_43160 [Bacillus mycoides Rock1-4]
gi|228759825|gb|EEM08799.1| hypothetical protein bmyco0003_44360 [Bacillus mycoides Rock3-17]
Length = 54
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC CGYIY+ F+ L +++ CPVCG F P
Sbjct: 2 KKYICLPCGYIYDPEIGDPDEDIEPGTSFEDLSEDWVCPVCGEDTEHFAP 51
>gi|160937059|ref|ZP_02084422.1| hypothetical protein CLOBOL_01948 [Clostridium bolteae ATCC
BAA-613]
gi|158439960|gb|EDP17708.1| hypothetical protein CLOBOL_01948 [Clostridium bolteae ATCC
BAA-613]
Length = 56
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG+IY+ F+ +PD++ CP+CG K F
Sbjct: 4 KKYVCDPCGWIYDPEVGDPDGGIEPGTAFEDIPDDWVCPLCGVGKDMF 51
>gi|387131999|ref|YP_006297972.1| rubredoxin [Prevotella intermedia 17]
gi|386374847|gb|AFJ07656.1| rubredoxin [Prevotella intermedia 17]
Length = 54
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGY+Y+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYECETCGYVYDPEVGDPDGGIAPGTAFEDIPDDWVCPLCGVTKDDF 49
>gi|421145730|ref|ZP_15605574.1| acyl-CoA dehydrogenase, partial [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395487871|gb|EJG08782.1| acyl-CoA dehydrogenase, partial [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 491
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 73 VASKQAYICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRF 113
V S Y+C CG+ YN + KP F LP+++ CP CG PK +
Sbjct: 436 VYSPHVYVCSGCGHEYNPDLGDEDSDIKPGTRFKDLPEDWTCPDCGDPKSGY 487
>gi|126178204|ref|YP_001046169.1| rubredoxin-type Fe(Cys)4 protein [Methanoculleus marisnigri JR1]
gi|125860998|gb|ABN56187.1| Rubredoxin-type Fe(Cys)4 protein [Methanoculleus marisnigri JR1]
Length = 52
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 78 AYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFR 114
+Y C CGY+Y + KP F+ LP+ + CP CGAPK RF+
Sbjct: 3 SYRCTLCGYVYFPAIGDTDHGVKPGTAFEDLPETWKCPRCGAPKSRFK 50
>gi|399924737|ref|ZP_10782095.1| rubredoxin [Peptoniphilus rhinitidis 1-13]
Length = 53
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY+ F+ LP+++ CP+CGA K F
Sbjct: 2 KKYECTLCGYIYDPEVGDEDNGVKAGTAFENLPEDWTCPLCGAEKSDF 49
>gi|357633923|ref|ZP_09131801.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio sp. FW1012B]
gi|386393549|ref|ZP_10078330.1| rubredoxin [Desulfovibrio sp. U5L]
gi|357582477|gb|EHJ47810.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio sp. FW1012B]
gi|385734427|gb|EIG54625.1| rubredoxin [Desulfovibrio sp. U5L]
Length = 52
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y C CGY+Y+ F+ +P+++ CPVCGAPK F
Sbjct: 4 YECSICGYVYDPAAGDPDNGVAPGTKFEDIPEDWVCPVCGAPKSEF 49
>gi|381165547|ref|ZP_09874774.1| Rubredoxin [Phaeospirillum molischianum DSM 120]
gi|380685037|emb|CCG39586.1| Rubredoxin [Phaeospirillum molischianum DSM 120]
Length = 54
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
YIC CG++Y+ PF+ LPD++ CP CG K F
Sbjct: 4 YICSVCGFVYDPAIGLPDEDIPPGTPFESLPDDWICPECGVSKADF 49
>gi|17232049|ref|NP_488597.1| rubredoxin [Nostoc sp. PCC 7120]
gi|17133693|dbj|BAB76256.1| rubredoxin [Nostoc sp. PCC 7120]
Length = 54
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
++C CGY Y+ F+++P+++ CPVCGA K F P
Sbjct: 4 HVCTVCGYEYDPEVGDPDGGIAAATSFEEIPEDWVCPVCGATKDLFEP 51
>gi|134097|sp|P00272.3|RUBR2_PSEOL RecName: Full=Rubredoxin-2; Short=Rdxs; AltName: Full=Two-iron
rubredoxin
gi|5824145|emb|CAB54052.1| rubredoxin 2 [Pseudomonas putida]
Length = 173
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 11/49 (22%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRPY 116
+IC CG+IY+E F+ +PD++ CP CGA K + Y
Sbjct: 122 WICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATKEDYVLY 170
>gi|224025241|ref|ZP_03643607.1| hypothetical protein BACCOPRO_01975 [Bacteroides coprophilus DSM
18228]
gi|224018477|gb|EEF76475.1| hypothetical protein BACCOPRO_01975 [Bacteroides coprophilus DSM
18228]
Length = 54
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC C ++Y+ F+ +P+++ CPVCG K F+P
Sbjct: 2 KKYICTVCDWVYDPEVGDPEGGIAPGTAFEDIPEDWVCPVCGVGKEDFQP 51
>gi|189462040|ref|ZP_03010825.1| hypothetical protein BACCOP_02717 [Bacteroides coprocola DSM 17136]
gi|189431254|gb|EDV00239.1| rubredoxin [Bacteroides coprocola DSM 17136]
Length = 54
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC C ++Y+ F+ +P+++ CPVCG K F+P
Sbjct: 2 KKYICTVCDWVYDPEVGDPEGGIAPGTAFEDIPEDWVCPVCGVGKEDFQP 51
>gi|29655166|ref|NP_820858.1| rubredoxin [Coxiella burnetii RSA 493]
gi|153206176|ref|ZP_01945439.1| rubredoxin [Coxiella burnetii 'MSU Goat Q177']
gi|154707052|ref|YP_001423544.1| rubredoxin [Coxiella burnetii Dugway 5J108-111]
gi|161831563|ref|YP_001597700.1| rubredoxin [Coxiella burnetii RSA 331]
gi|165919279|ref|ZP_02219365.1| rubredoxin [Coxiella burnetii Q321]
gi|212211906|ref|YP_002302842.1| rubredoxin [Coxiella burnetii CbuG_Q212]
gi|212217856|ref|YP_002304643.1| rubredoxin [Coxiella burnetii CbuK_Q154]
gi|29542438|gb|AAO91372.1| rubredoxin [Coxiella burnetii RSA 493]
gi|120577306|gb|EAX33930.1| rubredoxin [Coxiella burnetii 'MSU Goat Q177']
gi|154356338|gb|ABS77800.1| rubredoxin [Coxiella burnetii Dugway 5J108-111]
gi|161763430|gb|ABX79072.1| rubredoxin [Coxiella burnetii RSA 331]
gi|165917002|gb|EDR35606.1| rubredoxin [Coxiella burnetii Q321]
gi|212010316|gb|ACJ17697.1| rubredoxin [Coxiella burnetii CbuG_Q212]
gi|212012118|gb|ACJ19498.1| rubredoxin [Coxiella burnetii CbuK_Q154]
Length = 57
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERKPF-----------DQLPDNYFCPVCGAPKRRFR 114
+ Y+C CG+IY E K + +++P+++ CP CGA K F
Sbjct: 4 KKYMCLLCGFIYEEEKGWPEDGIAPGTRWEEVPEDWLCPECGAMKSDFE 52
>gi|312897990|ref|ZP_07757399.1| rubredoxin [Megasphaera micronuciformis F0359]
gi|310620915|gb|EFQ04466.1| rubredoxin [Megasphaera micronuciformis F0359]
Length = 52
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
Y C CGYIY+E + +D +P ++ CP+CGA K F+
Sbjct: 4 YECTVCGYIYDEAEGDPDNGVAAGTKWDDVPADWVCPLCGAAKDAFQ 50
>gi|340750720|ref|ZP_08687557.1| rubredoxin-type Fe(Cys)4 protein [Fusobacterium mortiferum ATCC
9817]
gi|229420352|gb|EEO35399.1| rubredoxin-type Fe(Cys)4 protein [Fusobacterium mortiferum ATCC
9817]
Length = 113
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGY+Y+ PF+ LP+++ CP CG K F
Sbjct: 2 KKYMCEICGYVYDPAVGDVEHGIPAGTPFESLPEDWLCPPCGVSKDHF 49
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 11/53 (20%)
Query: 72 RVASKQAYICRDCGYIYN-----------ERKPFDQLPDNYFCPVCGAPKRRF 113
+ K Y+C CGY+Y+ PF ++ + + CP CGA K F
Sbjct: 56 NTSEKDLYVCEVCGYVYDPAVGDVEHGIPAGTPFAEISEEWVCPPCGAGKNHF 108
>gi|427388217|ref|ZP_18884100.1| rubredoxin [Bacteroides oleiciplenus YIT 12058]
gi|425724800|gb|EKU87674.1| rubredoxin [Bacteroides oleiciplenus YIT 12058]
Length = 53
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
YIC C Y+Y N +P F+ LPD++ CP+CG K F
Sbjct: 4 YICTVCEYVYDPELGDPENGIEPGTSFEDLPDDWVCPLCGVGKEEF 49
>gi|153955410|ref|YP_001396175.1| hypothetical protein CKL_2792 [Clostridium kluyveri DSM 555]
gi|219855826|ref|YP_002472948.1| hypothetical protein CKR_2483 [Clostridium kluyveri NBRC 12016]
gi|146348268|gb|EDK34804.1| Hrb [Clostridium kluyveri DSM 555]
gi|219569550|dbj|BAH07534.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 229
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 79 YICRDCGYIYN--------ERKP---FDQLPDNYFCPVCGAPKRRFRP 115
Y C CG+IY+ +P F+ LP ++ CPVCG K +F+P
Sbjct: 180 YQCSVCGFIYDPAVGDPDSGVEPGTLFEDLPKSWECPVCGVGKAKFKP 227
>gi|373451415|ref|ZP_09543339.1| hypothetical protein HMPREF0984_00381 [Eubacterium sp. 3_1_31]
gi|371968550|gb|EHO86006.1| hypothetical protein HMPREF0984_00381 [Eubacterium sp. 3_1_31]
Length = 207
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 74 ASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
K + C CGY+Y + LP +Y CP+CGAP F
Sbjct: 169 TEKHGWRCSICGYLYEG----EVLPQDYICPICGAPAAVFE 205
>gi|134116|sp|P00271.1|RUBR_MEGEL RecName: Full=Rubredoxin; Short=Rd
Length = 52
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 10/45 (22%)
Query: 79 YICRDCGYIYNERK----------PFDQLPDNYFCPVCGAPKRRF 113
Y C CGYIY+E + F LP ++ CP CGA K F
Sbjct: 4 YECSICGYIYDEAEGDDGNVAAGTKFADLPADWVCPTCGADKDAF 48
>gi|186684545|ref|YP_001867741.1| rubredoxin-type Fe(Cys)4 protein [Nostoc punctiforme PCC 73102]
gi|186466997|gb|ACC82798.1| Rubredoxin-type Fe(Cys)4 protein [Nostoc punctiforme PCC 73102]
Length = 53
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
YIC CGY Y+ F+ +PD++ CP CGA K +F
Sbjct: 4 YICTVCGYEYDPEFGDPDSDIAPGTAFEDIPDDWVCPTCGATKDQF 49
>gi|33239831|ref|NP_874773.1| rubredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237357|gb|AAP99425.1| Rubredoxin [Prochlorococcus marinus subsp. marinus str. CCMP1375]
Length = 60
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 11/51 (21%)
Query: 75 SKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFR 114
+++ + C+DC Y Y+ + PFD LP ++ CP+C A K+RF+
Sbjct: 6 TQKKHQCKDCIYSYDPKLGDPSQGVPPGVPFDDLPASWVCPLCKASKKRFK 56
>gi|421565381|ref|ZP_16011156.1| rubredoxin [Neisseria meningitidis NM3081]
gi|433536644|ref|ZP_20493149.1| rubredoxin [Neisseria meningitidis 77221]
gi|402344507|gb|EJU79643.1| rubredoxin [Neisseria meningitidis NM3081]
gi|432273580|gb|ELL28677.1| rubredoxin [Neisseria meningitidis 77221]
Length = 56
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CG+IY+E F+ +PD++ CP CG K F
Sbjct: 4 YMCGPCGWIYDEELGDPEHGIAPGTKFEDIPDDWKCPECGVDKEDF 49
>gi|385339987|ref|YP_005893859.1| rubredoxin [Neisseria meningitidis G2136]
gi|421542324|ref|ZP_15988432.1| rubredoxin [Neisseria meningitidis NM255]
gi|325198231|gb|ADY93687.1| rubredoxin [Neisseria meningitidis G2136]
gi|402317581|gb|EJU53116.1| rubredoxin [Neisseria meningitidis NM255]
Length = 56
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CG+IY+E F+ +PD++ CP CG K F
Sbjct: 4 YMCGPCGWIYDEEHGDPEHGIAPGTKFEDIPDDWKCPECGVDKEDF 49
>gi|387819109|ref|YP_005679456.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
gi|322807153|emb|CBZ04727.1| butyryl-CoA dehydrogenase [Clostridium botulinum H04402 065]
Length = 635
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 15/72 (20%)
Query: 53 LSPPHQQQLLASAAPKFSMRVASKQAYICRDCGYIY-----------NERKPFDQLPDNY 101
++PP ++ + A PK + ++ + Y+C CGY Y N F+++P+++
Sbjct: 565 VAPPMKK--MKRAVPKKTH--STWKHYVCNGCGYEYDPSLGDSEGDINPGTTFEKIPEDW 620
Query: 102 FCPVCGAPKRRF 113
CP CG K F
Sbjct: 621 TCPACGEGKDMF 632
>gi|293402106|ref|ZP_06646245.1| high molecular weight rubredoxin (Nitric oxide reductase
NADH:FprAoxidoreductase) [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291304498|gb|EFE45748.1| high molecular weight rubredoxin (Nitric oxide reductase
NADH:FprAoxidoreductase) [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 207
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Query: 74 ASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
K + C CGY+Y + LP +Y CP+CGAP F
Sbjct: 169 TEKHGWRCSICGYLYEG----EVLPQDYICPICGAPAAVFE 205
>gi|374813442|ref|ZP_09717179.1| flavin reductase domain-containing FMN-binding protein [Treponema
primitia ZAS-1]
Length = 208
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 59 QQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVC 106
Q PK + + K+ YIC+ CGY+Y D LP ++ CP+C
Sbjct: 155 QYYFDHIKPKPPVESSKKKGYICKICGYVYEG----DVLPPDFVCPIC 198
>gi|451817924|ref|YP_007454125.1| rubredoxin [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451783903|gb|AGF54871.1| rubredoxin [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 53
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ + +P F+ LPD + CP+C K F
Sbjct: 2 EKYVCEVCGYIYDPKLGDPDGGIEPYVDFNDLPDCWVCPICSFNKDNF 49
>gi|16126734|ref|NP_421298.1| rubredoxin [Caulobacter crescentus CB15]
gi|221235516|ref|YP_002517953.1| rubredoxin [Caulobacter crescentus NA1000]
gi|13424050|gb|AAK24466.1| rubredoxin [Caulobacter crescentus CB15]
gi|220964689|gb|ACL96045.1| rubredoxin [Caulobacter crescentus NA1000]
Length = 59
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
+ + CR CGYIY+E + + +P + CP+CG PK F
Sbjct: 7 KVWQCRTCGYIYDEEQGDPGEGLAPGTRWADIPAGWVCPLCGTPKSDF 54
>gi|357632191|ref|ZP_09130069.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio sp. FW1012B]
gi|357580745|gb|EHJ46078.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio sp. FW1012B]
Length = 71
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 11/44 (25%)
Query: 83 DCGYIYN----ERK-------PFDQLPDNYFCPVCGAPKRRFRP 115
+CGYIY+ +RK F+ LP+++ CP+CG K+ FRP
Sbjct: 14 NCGYIYDPDRGDRKGKIPAGTSFEDLPEDWKCPICGGGKKCFRP 57
>gi|386393173|ref|ZP_10077954.1| rubredoxin [Desulfovibrio sp. U5L]
gi|385734051|gb|EIG54249.1| rubredoxin [Desulfovibrio sp. U5L]
Length = 71
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 11/44 (25%)
Query: 83 DCGYIYN----ERK-------PFDQLPDNYFCPVCGAPKRRFRP 115
+CGYIY+ +RK F+ LP+++ CP+CG K+ FRP
Sbjct: 14 NCGYIYDPDRGDRKGKVPAGTSFEDLPEDWKCPICGGGKKCFRP 57
>gi|220932743|ref|YP_002509651.1| rubrerythrin [Halothermothrix orenii H 168]
gi|219994053|gb|ACL70656.1| Rubrerythrin [Halothermothrix orenii H 168]
Length = 185
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 7/38 (18%)
Query: 80 ICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYT 117
IC CGY D +PD CP+CGAP+ +F+ +T
Sbjct: 154 ICSICGYT-----ETDGMPDK--CPICGAPRDKFKEFT 184
>gi|254383661|ref|ZP_04999010.1| rubredoxin [Streptomyces sp. Mg1]
gi|194342555|gb|EDX23521.1| rubredoxin [Streptomyces sp. Mg1]
Length = 63
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 11/52 (21%)
Query: 73 VASKQAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
V +K+A++C CG++Y E ++ +PD++ CP CGA K F
Sbjct: 7 VTAKRAWMCLLCGWVYYEELGAPEDGIPPGTRWEDVPDDWECPECGAAKIDF 58
>gi|355670605|ref|ZP_09057352.1| rubredoxin [Clostridium citroniae WAL-17108]
gi|354816042|gb|EHF00631.1| rubredoxin [Clostridium citroniae WAL-17108]
Length = 54
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG+IY+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYVCDPCGWIYDPEVGDPDGGIAPGTAFEDIPDDWVCPLCGVGKDMF 49
>gi|389576046|ref|ZP_10166074.1| conserved protein of DIM6/NTAB family [Eubacterium cellulosolvens
6]
gi|389311531|gb|EIM56464.1| conserved protein of DIM6/NTAB family [Eubacterium cellulosolvens
6]
Length = 216
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 81 CRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFRPYTPAV 120
CR CGY Y ++LP+++ CPVC P F PAV
Sbjct: 174 CRICGYEY----VGEELPEDFICPVCKHPASDFEKIAPAV 209
>gi|329956637|ref|ZP_08297210.1| rubredoxin [Bacteroides clarus YIT 12056]
gi|328524009|gb|EGF51085.1| rubredoxin [Bacteroides clarus YIT 12056]
Length = 53
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRF 113
+ YIC C Y+Y N +P F+ LPD++ CP+CG K F
Sbjct: 2 EKYICTICEYVYDPELGDPENGIEPGTSFEDLPDDWVCPLCGVGKDEF 49
>gi|291087799|ref|ZP_06347520.2| rubredoxin [Clostridium sp. M62/1]
gi|291073951|gb|EFE11315.1| rubredoxin [Clostridium sp. M62/1]
Length = 60
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ E P F+ +P+++ CP+CG K +F
Sbjct: 9 KKYVCDVCGYIYDPAEGDPDNGVAAGTAFEDIPESWVCPLCGVGKDQF 56
>gi|239626687|ref|ZP_04669718.1| rubredoxin-type Fe(Cys)4 protein [Clostridiales bacterium
1_7_47_FAA]
gi|239516833|gb|EEQ56699.1| rubredoxin-type Fe(Cys)4 protein [Clostridiales bacterium
1_7_47FAA]
Length = 54
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG+IY+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYVCDPCGWIYDPEVGDPDGGIAPGTAFEDIPDDWVCPLCGVGKDMF 49
>gi|134117|sp|P00267.1|RUBR_PEPAS RecName: Full=Rubredoxin; Short=Rd
Length = 53
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 10/50 (20%)
Query: 77 QAYICRDCGYIYN----------ERKPFDQLPDNYFCPVCGAPKRRFRPY 116
Q + C CGYIY+ + F+ + +N+ CP+CGA K F Y
Sbjct: 2 QKFECTLCGYIYDPALVGPDTPDQDGAFEDVSENWVCPLCGAGKEDFEVY 51
>gi|226350032|ref|YP_002777145.1| rubredoxin [Rhodococcus opacus B4]
gi|419960928|ref|ZP_14476939.1| rubredoxin [Rhodococcus opacus M213]
gi|37912011|gb|AAR05102.1| rubredoxin [Rhodococcus sp. P400]
gi|226245944|dbj|BAH47208.1| rubredoxin [Rhodococcus opacus B4]
gi|414573708|gb|EKT84390.1| rubredoxin [Rhodococcus opacus M213]
Length = 86
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPA 119
+ ++C C +Y+ + F +PD++ CPVCGA K+ FR P
Sbjct: 17 ELWVCEVCEDVYDPQLGDPDGGIPPGTAFQDIPDDWVCPVCGARKKEFRKLRPG 70
>gi|82949294|dbj|BAE53374.1| rubredoxin [Rhodococcus opacus]
Length = 86
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPA 119
+ ++C C +Y+ + F +PD++ CPVCGA K+ FR P
Sbjct: 17 ELWVCEVCEDVYDPQLGDPDGGIPPGTAFQDIPDDWVCPVCGARKKEFRKLRPG 70
>gi|445120094|ref|ZP_21379236.1| rubredoxin [Prevotella nigrescens F0103]
gi|444839354|gb|ELX66425.1| rubredoxin [Prevotella nigrescens F0103]
Length = 54
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ Y C CGYIY+ F+ +PD++ CP+CG K F
Sbjct: 2 KKYECNTCGYIYDPAVGDPDGGIEPGTAFEDIPDDWVCPLCGVSKDDF 49
>gi|88603432|ref|YP_503610.1| rubredoxin-type Fe(Cys)4 protein [Methanospirillum hungatei JF-1]
gi|88188894|gb|ABD41891.1| Rubredoxin-type Fe(Cys)4 protein [Methanospirillum hungatei JF-1]
Length = 52
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 11/47 (23%)
Query: 78 AYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+Y C CGY+Y+ K FD LPD++ CP+C K F
Sbjct: 3 SYECSICGYVYDPAKGDPDNGIEPGTAFDDLPDDWLCPLCQEGKEVF 49
>gi|423074699|ref|ZP_17063424.1| rubredoxin [Desulfitobacterium hafniense DP7]
gi|361854388|gb|EHL06459.1| rubredoxin [Desulfitobacterium hafniense DP7]
Length = 55
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 11/51 (21%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPY 116
Q Y+C C Y+Y+ F+ +P+++ CP CG K +F Y
Sbjct: 3 QKYVCTICQYVYDPEVGDPDSGVAPGTAFEDIPEDWVCPTCGVSKDQFEVY 53
>gi|319900834|ref|YP_004160562.1| Rubredoxin-type Fe(Cys)4 protein [Bacteroides helcogenes P 36-108]
gi|319415865|gb|ADV42976.1| Rubredoxin-type Fe(Cys)4 protein [Bacteroides helcogenes P 36-108]
Length = 54
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
+ YIC C YIY+ K F+ +P+++ CP+CG K F
Sbjct: 2 EKYICTVCDYIYDPEKGDPDSGIDPGTAFEDIPEDWTCPLCGVGKEDF 49
>gi|260910700|ref|ZP_05917359.1| high molecular weight rubredoxin [Prevotella sp. oral taxon 472
str. F0295]
gi|288928770|ref|ZP_06422616.1| rubredoxin [Prevotella sp. oral taxon 317 str. F0108]
gi|260635210|gb|EEX53241.1| high molecular weight rubredoxin [Prevotella sp. oral taxon 472
str. F0295]
gi|288329754|gb|EFC68339.1| rubredoxin [Prevotella sp. oral taxon 317 str. F0108]
Length = 54
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
+ YIC CG+IY+ F+ +P+++ CP+CG K F
Sbjct: 2 KKYICETCGWIYDPAVGDPDGGIEPGTAFEDIPEDWVCPICGVGKDDF 49
>gi|39995953|ref|NP_951904.1| rubredoxin [Geobacter sulfurreducens PCA]
gi|409911398|ref|YP_006889863.1| rubredoxin [Geobacter sulfurreducens KN400]
gi|39982717|gb|AAR34177.1| rubredoxin [Geobacter sulfurreducens PCA]
gi|298504966|gb|ADI83689.1| rubredoxin [Geobacter sulfurreducens KN400]
Length = 52
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRFRP 115
Q +IC C Y+Y+ PF++LPD + CP CG K F P
Sbjct: 2 QRWICTVCQYVYDPFVGDPLNGVPPGTPFEELPDGWVCPACGVAKNMFVP 51
>gi|266623572|ref|ZP_06116507.1| rubredoxin [Clostridium hathewayi DSM 13479]
gi|288864636|gb|EFC96934.1| rubredoxin [Clostridium hathewayi DSM 13479]
Length = 53
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CGYIY+ F+ LP+++ CP+CG K F P
Sbjct: 2 KKYVCEPCGYIYDPAAGDPDNGIDPGTAFEDLPEDWVCPLCGMGKDVFVP 51
>gi|357407280|ref|YP_004919204.1| rubredoxin [Methylomicrobium alcaliphilum 20Z]
gi|351719945|emb|CCE25621.1| Rubredoxin (Rd) [Methylomicrobium alcaliphilum 20Z]
Length = 56
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 11/49 (22%)
Query: 77 QAYICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRFR 114
+ Y C +C +IY+E K ++ + D++ CP+CGAPK F+
Sbjct: 5 RKYHCMECEHIYDEAKGDPDSGIAPGTRWEDISDDWVCPICGAPKSFFK 53
>gi|15678504|ref|NP_275619.1| pyruvate dehydrogenase / acetolactate synthase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2621546|gb|AAB84982.1| pyruvate dehydrogenase / acetolactate synthase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 553
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 81 CRDCGYIYNERK--PFDQLPDNYFCPVCGAPKRRF 113
C C YI++E FD LP ++ CPVC AP+ F
Sbjct: 6 CTVCNYIFHEEADGEFDSLPADWRCPVCNAPRTAF 40
>gi|409095864|ref|ZP_11215888.1| rubrerythrin [Thermococcus zilligii AN1]
Length = 171
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 7/41 (17%)
Query: 73 VASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
+ K+ YIC CGY D+ P+ +CPVCGAP+ +F
Sbjct: 134 IEIKRVYICPVCGYT-----AVDEAPE--YCPVCGAPREKF 167
>gi|339444633|ref|YP_004710637.1| hypothetical protein EGYY_10580 [Eggerthella sp. YY7918]
gi|338904385|dbj|BAK44236.1| conserved protein [Eggerthella sp. YY7918]
Length = 225
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 76 KQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRFR 114
K A+ C CG++ + D+LPD++ CPVCG K F
Sbjct: 187 KYAWRCTVCGHM----EYVDELPDDFICPVCGVGKDMFE 221
>gi|303247523|ref|ZP_07333794.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio fructosovorans JJ]
gi|302491003|gb|EFL50897.1| Rubredoxin-type Fe(Cys)4 protein [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGAPKRRF 113
YIC CGY Y+ ++ P ++LP+++ CPVC A +R+F
Sbjct: 6 YICLQCGYTYDPKRGDPKGGIEPGTPGEKLPEDWRCPVCQADQRQF 51
>gi|297568992|ref|YP_003690336.1| Rubredoxin-type Fe(Cys)4 protein [Desulfurivibrio alkaliphilus
AHT2]
gi|296924907|gb|ADH85717.1| Rubredoxin-type Fe(Cys)4 protein [Desulfurivibrio alkaliphilus
AHT2]
Length = 75
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 14/64 (21%)
Query: 76 KQAYICR--DCGYIYN----ERK-------PFDQLPDNYFCPVCGAPKRRFRPYT-PAVT 121
++ Y C+ +CGY+Y+ +RK F+ LP+++ CP+CG K+ FRP P T
Sbjct: 5 EEMYQCQTSNCGYVYDPDRGDRKGKIPPGTQFEDLPESWRCPICGGTKKCFRPLAGPGST 64
Query: 122 RGAN 125
+ A
Sbjct: 65 KEAK 68
>gi|260881304|ref|ZP_05404089.2| putative rubrerythrin [Mitsuokella multacida DSM 20544]
gi|260849063|gb|EEX69070.1| putative rubrerythrin [Mitsuokella multacida DSM 20544]
Length = 183
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 59 QQLLASAAPKFSMRVASKQAYICRDCGYIYNERKPFDQLPDNYFCPVCGAPKRRF 113
Q +L PK K+ Y+C CGY Y + D+Y CP+CG PK F
Sbjct: 128 QAMLDKYQPK-KADTTGKKVYVCPVCGYEY--VGDINDEDDSYVCPLCGQPKSAF 179
>gi|110835569|ref|YP_694428.1| rubredoxin [Alcanivorax borkumensis SK2]
gi|122959212|sp|Q0VKZ2.1|RUBR2_ALCBS RecName: Full=Rubredoxin-2; Short=Rdxs
gi|110648680|emb|CAL18156.1| rubredoxin [Alcanivorax borkumensis SK2]
Length = 174
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNE-----------RKPFDQLPDNYFCPVCGAPKRRF 113
+IC CG+IY+E F+ +PD++ CP CGA K +
Sbjct: 124 WICITCGHIYDEALGDETEGFAPGTLFEDIPDDWCCPDCGATKEDY 169
>gi|432335217|ref|ZP_19586822.1| rubredoxin [Rhodococcus wratislaviensis IFP 2016]
gi|430777862|gb|ELB93180.1| rubredoxin [Rhodococcus wratislaviensis IFP 2016]
Length = 86
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 11/54 (20%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRPYTPA 119
+ ++C C +Y+ + F +PD++ CPVCGA K+ FR P
Sbjct: 17 ELWVCEVCEDVYDPQLGDPDGGIPPGTAFQDIPDDWVCPVCGARKKEFRKLRPG 70
>gi|410727270|ref|ZP_11365492.1| rubredoxin [Clostridium sp. Maddingley MBC34-26]
gi|410599300|gb|EKQ53856.1| rubredoxin [Clostridium sp. Maddingley MBC34-26]
Length = 53
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER--KP---------FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CGYIY+ P FD LPD + CP+C K F
Sbjct: 2 EKYVCEVCGYIYDPEVGDPDGGIPPHVDFDDLPDYWVCPICSFNKDNF 49
>gi|340751345|ref|ZP_08688166.1| rubredoxin [Fusobacterium mortiferum ATCC 9817]
gi|229421660|gb|EEO36707.1| rubredoxin [Fusobacterium mortiferum ATCC 9817]
Length = 53
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRFRP 115
+ YIC+ CGY Y+ ++ +P+++ CP+CG K F P
Sbjct: 2 KKYICKVCGYEYDPAVGDVDNGVAAGTAWEDVPEDWLCPLCGVGKDEFEP 51
>gi|397781164|ref|YP_006545637.1| rubredoxin-type Fe(Cys)4 protein [Methanoculleus bourgensis MS2]
gi|396939666|emb|CCJ36921.1| rubredoxin-type Fe(Cys)4 protein [Methanoculleus bourgensis MS2]
Length = 116
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 11/50 (22%)
Query: 75 SKQAYICRDCGYIY-------NERKP----FDQLPDNYFCPVCGAPKRRF 113
S Q Y C CGYIY ++ P F++LP +Y CPVCGA R F
Sbjct: 4 SMQPYRCGVCGYIYEPGRGEPGQKIPPGTAFEELPADYTCPVCGAGPRSF 53
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 12/59 (20%)
Query: 62 LASAAPKFSMRVASKQA-YICRDCGYIYNERK-----------PFDQLPDNYFCPVCGA 108
+ A P+ + +A + Y+C CGYIY+ + F LP++Y CPVCG
Sbjct: 45 VCGAGPRSFLLLAGRTGRYLCVACGYIYDPERGEPKRGIPPGTDFRDLPESYICPVCGV 103
>gi|340345921|ref|ZP_08669051.1| rubredoxin/rubredoxin reductase [Prevotella dentalis DSM 3688]
gi|433651713|ref|YP_007278092.1| rubredoxin [Prevotella dentalis DSM 3688]
gi|339612908|gb|EGQ17704.1| rubredoxin/rubredoxin reductase [Prevotella dentalis DSM 3688]
gi|433302246|gb|AGB28062.1| rubredoxin [Prevotella dentalis DSM 3688]
Length = 54
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 11/50 (22%)
Query: 77 QAYICRDCGYIY--------NERKP---FDQLPDNYFCPVCGAPKRRFRP 115
+ Y+C CG++Y N +P F+ LP+++ CP CG K F P
Sbjct: 2 KKYVCDVCGWVYDPAVGDPDNGVEPGTAFEDLPEDWVCPECGVGKEDFSP 51
>gi|427732100|ref|YP_007078337.1| rubredoxin [Nostoc sp. PCC 7524]
gi|427368019|gb|AFY50740.1| rubredoxin [Nostoc sp. PCC 7524]
Length = 54
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Q YIC CGY Y+ F+ +P+++ CPVCGA K F
Sbjct: 2 QIYICSVCGYEYDPEVGDPDSGILPGTLFEAIPEDWVCPVCGATKDLF 49
>gi|257458360|ref|ZP_05623508.1| rubredoxin [Treponema vincentii ATCC 35580]
gi|257444295|gb|EEV19390.1| rubredoxin [Treponema vincentii ATCC 35580]
Length = 52
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 11/47 (23%)
Query: 79 YICRDCGYIYNER--------KP---FDQLPDNYFCPVCGAPKRRFR 114
Y+C CGY Y+ KP F+ LPD + CP+CG K F+
Sbjct: 4 YVCDLCGYEYDPNTGDPEGNIKPGTRFEDLPDTWVCPLCGVSKDGFK 50
>gi|150003995|ref|YP_001298739.1| rubredoxin [Bacteroides vulgatus ATCC 8482]
gi|212692846|ref|ZP_03300974.1| hypothetical protein BACDOR_02345 [Bacteroides dorei DSM 17855]
gi|237709531|ref|ZP_04540012.1| rubredoxin [Bacteroides sp. 9_1_42FAA]
gi|265754740|ref|ZP_06089792.1| rubredoxin [Bacteroides sp. 3_1_33FAA]
gi|294778032|ref|ZP_06743466.1| rubredoxin [Bacteroides vulgatus PC510]
gi|319639768|ref|ZP_07994498.1| rubredoxin [Bacteroides sp. 3_1_40A]
gi|345514575|ref|ZP_08794086.1| rubredoxin [Bacteroides dorei 5_1_36/D4]
gi|345518914|ref|ZP_08798347.1| rubredoxin [Bacteroides sp. 4_3_47FAA]
gi|423230194|ref|ZP_17216598.1| rubredoxin [Bacteroides dorei CL02T00C15]
gi|423241076|ref|ZP_17222190.1| rubredoxin [Bacteroides dorei CL03T12C01]
gi|423243907|ref|ZP_17224982.1| rubredoxin [Bacteroides dorei CL02T12C06]
gi|423312860|ref|ZP_17290796.1| rubredoxin [Bacteroides vulgatus CL09T03C04]
gi|149932419|gb|ABR39117.1| putative rubredoxin [Bacteroides vulgatus ATCC 8482]
gi|212664635|gb|EEB25207.1| rubredoxin [Bacteroides dorei DSM 17855]
gi|229436612|gb|EEO46689.1| rubredoxin [Bacteroides dorei 5_1_36/D4]
gi|229456587|gb|EEO62308.1| rubredoxin [Bacteroides sp. 9_1_42FAA]
gi|263234854|gb|EEZ20422.1| rubredoxin [Bacteroides sp. 3_1_33FAA]
gi|294448090|gb|EFG16656.1| rubredoxin [Bacteroides vulgatus PC510]
gi|317388585|gb|EFV69434.1| rubredoxin [Bacteroides sp. 3_1_40A]
gi|345457286|gb|EET13860.2| rubredoxin [Bacteroides sp. 4_3_47FAA]
gi|392631703|gb|EIY25672.1| rubredoxin [Bacteroides dorei CL02T00C15]
gi|392643138|gb|EIY36896.1| rubredoxin [Bacteroides dorei CL03T12C01]
gi|392643425|gb|EIY37175.1| rubredoxin [Bacteroides dorei CL02T12C06]
gi|392686891|gb|EIY80190.1| rubredoxin [Bacteroides vulgatus CL09T03C04]
Length = 54
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 77 QAYICRDCGYIYN--ERKP---------FDQLPDNYFCPVCGAPKRRF 113
+ Y+C CG++Y+ E P F+ +PD++ CP+CG K F
Sbjct: 2 KKYVCTVCGWVYDPAEGDPEGGIAPGTAFEDIPDDWVCPLCGVGKDDF 49
>gi|186476880|ref|YP_001858350.1| rubredoxin-type Fe(Cys)4 protein [Burkholderia phymatum STM815]
gi|184193339|gb|ACC71304.1| Rubredoxin-type Fe(Cys)4 protein [Burkholderia phymatum STM815]
Length = 58
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 11/52 (21%)
Query: 73 VASKQAYICRDCGYIYNERKP-----------FDQLPDNYFCPVCGAPKRRF 113
+ ++++C CG+IYNE + F +PD++ CP+C K F
Sbjct: 2 IVEYKSWVCLICGWIYNEEEGLPEEGIAAGTRFADIPDDWRCPLCDVGKAEF 53
>gi|59801284|ref|YP_207996.1| rubredoxin [Neisseria gonorrhoeae FA 1090]
gi|240014208|ref|ZP_04721121.1| rebredoxin [Neisseria gonorrhoeae DGI18]
gi|240016643|ref|ZP_04723183.1| rebredoxin [Neisseria gonorrhoeae FA6140]
gi|240121771|ref|ZP_04734733.1| rebredoxin [Neisseria gonorrhoeae PID24-1]
gi|254493664|ref|ZP_05106835.1| rubredoxin [Neisseria gonorrhoeae 1291]
gi|268594720|ref|ZP_06128887.1| rubredoxin [Neisseria gonorrhoeae 35/02]
gi|268596952|ref|ZP_06131119.1| rubredoxin [Neisseria gonorrhoeae FA19]
gi|268598873|ref|ZP_06133040.1| rubredoxin [Neisseria gonorrhoeae MS11]
gi|268601228|ref|ZP_06135395.1| rubredoxin [Neisseria gonorrhoeae PID18]
gi|268603549|ref|ZP_06137716.1| rubredoxin [Neisseria gonorrhoeae PID1]
gi|268682029|ref|ZP_06148891.1| rubredoxin [Neisseria gonorrhoeae PID332]
gi|268684239|ref|ZP_06151101.1| rubredoxin [Neisseria gonorrhoeae SK-92-679]
gi|268686497|ref|ZP_06153359.1| rubredoxin [Neisseria gonorrhoeae SK-93-1035]
gi|296314197|ref|ZP_06864138.1| rubredoxin [Neisseria polysaccharea ATCC 43768]
gi|56682925|gb|AAW21818.1| rebredoxin [Neisseria lactamica]
gi|59718179|gb|AAW89584.1| putative rubredoxin [Neisseria gonorrhoeae FA 1090]
gi|226512704|gb|EEH62049.1| rubredoxin [Neisseria gonorrhoeae 1291]
gi|268548109|gb|EEZ43527.1| rubredoxin [Neisseria gonorrhoeae 35/02]
gi|268550740|gb|EEZ45759.1| rubredoxin [Neisseria gonorrhoeae FA19]
gi|268583004|gb|EEZ47680.1| rubredoxin [Neisseria gonorrhoeae MS11]
gi|268585359|gb|EEZ50035.1| rubredoxin [Neisseria gonorrhoeae PID18]
gi|268587680|gb|EEZ52356.1| rubredoxin [Neisseria gonorrhoeae PID1]
gi|268622313|gb|EEZ54713.1| rubredoxin [Neisseria gonorrhoeae PID332]
gi|268624523|gb|EEZ56923.1| rubredoxin [Neisseria gonorrhoeae SK-92-679]
gi|268626781|gb|EEZ59181.1| rubredoxin [Neisseria gonorrhoeae SK-93-1035]
gi|296839091|gb|EFH23029.1| rubredoxin [Neisseria polysaccharea ATCC 43768]
Length = 56
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 11/46 (23%)
Query: 79 YICRDCGYIYNER-----------KPFDQLPDNYFCPVCGAPKRRF 113
Y+C CG+IY+E F+ +PD++ CP CG K F
Sbjct: 4 YMCGPCGWIYDEELGDPEHGIAPGTKFEDIPDDWKCPECGVGKEDF 49
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,728,070,217
Number of Sequences: 23463169
Number of extensions: 110224175
Number of successful extensions: 378869
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 1066
Number of HSP's that attempted gapping in prelim test: 377435
Number of HSP's gapped (non-prelim): 1405
length of query: 169
length of database: 8,064,228,071
effective HSP length: 129
effective length of query: 40
effective length of database: 9,332,446,566
effective search space: 373297862640
effective search space used: 373297862640
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)