Query 040421
Match_columns 407
No_of_seqs 325 out of 2843
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 13:07:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040421.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040421hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qfp_A Purple acid phosphatase 100.0 1.7E-73 5.7E-78 563.5 38.0 401 1-401 22-422 (424)
2 1xzw_A Purple acid phosphatase 100.0 3.8E-73 1.3E-77 561.1 38.7 398 1-398 28-426 (426)
3 2yeq_A Apased, PHOD, alkaline 100.0 2.6E-39 8.8E-44 324.9 31.3 367 3-393 13-479 (527)
4 3tgh_A Glideosome-associated p 100.0 8.9E-40 3E-44 310.3 18.9 259 97-400 2-313 (342)
5 1ute_A Protein (II purple acid 100.0 1.6E-33 5.5E-38 265.9 17.6 263 97-401 5-309 (313)
6 3ib7_A ICC protein; metallopho 99.9 7.1E-24 2.4E-28 201.5 19.8 240 96-382 23-282 (330)
7 3d03_A Phosphohydrolase; glyce 99.9 4.2E-23 1.4E-27 190.9 18.7 233 99-378 1-254 (274)
8 2nxf_A Putative dimetal phosph 99.9 8.8E-23 3E-27 192.8 17.2 228 96-377 3-312 (322)
9 2xmo_A LMO2642 protein; phosph 99.8 1.8E-18 6.3E-23 171.0 19.8 199 96-301 37-288 (443)
10 1uf3_A Hypothetical protein TT 99.6 1.8E-15 6.2E-20 135.4 8.5 171 98-296 5-190 (228)
11 2yvt_A Hypothetical protein AQ 99.5 2.7E-14 9.2E-19 130.6 12.5 184 98-296 5-222 (260)
12 2q8u_A Exonuclease, putative; 99.5 1.1E-14 3.9E-19 138.5 10.2 190 96-301 16-235 (336)
13 1z2w_A Vacuolar protein sortin 99.5 1.9E-12 6.7E-17 112.8 16.9 181 96-393 8-191 (192)
14 2a22_A Vacuolar protein sortin 99.4 6.3E-12 2.1E-16 111.6 18.0 188 98-393 25-215 (215)
15 3av0_A DNA double-strand break 99.4 7.3E-12 2.5E-16 121.2 16.3 177 96-299 18-211 (386)
16 3ck2_A Conserved uncharacteriz 99.4 2.7E-11 9.1E-16 104.0 16.4 162 97-384 5-167 (176)
17 3rl5_A Metallophosphoesterase 99.3 5.9E-12 2E-16 116.0 12.4 204 95-336 56-278 (296)
18 1nnw_A Hypothetical protein; s 99.3 4.4E-12 1.5E-16 115.4 11.1 190 99-336 2-198 (252)
19 3tho_B Exonuclease, putative; 99.3 9E-12 3.1E-16 120.2 12.8 190 99-301 1-217 (379)
20 3qfm_A SAPH, putative uncharac 99.3 4.4E-11 1.5E-15 109.8 14.2 220 96-378 9-229 (270)
21 3rqz_A Metallophosphoesterase; 99.1 1.6E-10 5.5E-15 104.7 10.8 153 97-298 2-154 (246)
22 4fbw_A DNA repair protein RAD3 99.1 4.4E-09 1.5E-13 101.5 20.2 247 95-394 10-318 (417)
23 1xm7_A Hypothetical protein AQ 99.1 2.4E-10 8.1E-15 99.8 10.3 140 98-301 1-154 (195)
24 3t1i_A Double-strand break rep 99.1 6.8E-09 2.3E-13 100.6 21.1 78 95-176 29-152 (431)
25 1s3l_A Hypothetical protein MJ 99.1 2.8E-10 9.7E-15 98.8 10.2 65 96-176 22-88 (190)
26 2kkn_A Uncharacterized protein 99.1 3.2E-09 1.1E-13 91.0 16.7 63 97-176 21-86 (178)
27 4fbk_A DNA repair and telomere 99.1 6E-09 2E-13 101.4 19.1 77 95-176 73-196 (472)
28 1ii7_A MRE11 nuclease; RAD50, 99.0 2.6E-09 8.9E-14 101.2 12.2 74 99-176 1-88 (333)
29 1su1_A Hypothetical protein YF 98.8 6.7E-08 2.3E-12 85.0 13.6 74 98-176 25-101 (208)
30 1hp1_A 5'-nucleotidase; metall 98.6 3.5E-08 1.2E-12 99.0 7.7 188 97-299 7-232 (516)
31 2z1a_A 5'-nucleotidase; metal- 98.6 6.1E-08 2.1E-12 98.0 9.1 175 96-300 27-244 (552)
32 3qfk_A Uncharacterized protein 98.5 1.2E-06 4E-11 88.1 13.7 192 96-299 17-252 (527)
33 4h2g_A 5'-nucleotidase; dimer, 98.4 6.9E-07 2.3E-11 90.1 10.4 179 96-299 23-245 (546)
34 3ztv_A NAD nucleotidase, NADN; 98.4 1.2E-06 3.9E-11 89.0 10.9 177 96-299 10-231 (579)
35 3ive_A Nucleotidase; structura 98.4 1.5E-06 5.1E-11 86.9 10.6 186 97-298 5-237 (509)
36 2wdc_A SOXB, sulfur oxidation 98.3 3.1E-06 1E-10 85.4 10.9 144 127-299 123-291 (562)
37 1t71_A Phosphatase, conserved 98.2 2.3E-05 7.8E-10 71.4 14.7 177 97-301 3-190 (281)
38 3c9f_A 5'-nucleotidase; 2',3'- 98.0 5E-05 1.7E-09 76.4 12.6 186 96-299 13-243 (557)
39 2z06_A Putative uncharacterize 98.0 0.00014 4.8E-09 65.0 13.8 170 99-300 1-176 (252)
40 1t70_A Phosphatase; crystal, X 97.9 0.00052 1.8E-08 61.5 16.3 171 99-301 1-180 (255)
41 3gve_A YFKN protein; alpha-bet 97.8 9.2E-05 3.1E-09 69.8 10.9 49 247-299 206-254 (341)
42 3jyf_A 2',3'-cyclic nucleotide 97.7 0.00046 1.6E-08 64.9 13.4 47 247-299 200-247 (339)
43 4h1s_A 5'-nucleotidase; hydrol 97.6 0.00036 1.2E-08 70.0 11.2 75 207-299 135-223 (530)
44 1g5b_A Serine/threonine protei 97.4 8.8E-05 3E-09 65.4 4.0 68 97-176 11-79 (221)
45 2dfj_A Diadenosinetetraphospha 97.3 0.00018 6.2E-09 65.8 4.8 68 99-176 1-69 (280)
46 2ede_A Netrin receptor DCC; tu 97.2 0.002 6.7E-08 49.8 9.2 76 9-95 23-111 (114)
47 2edd_A Netrin receptor DCC; tu 97.2 0.00095 3.3E-08 52.8 7.3 75 5-92 27-117 (123)
48 1x5l_A Ephrin type-A receptor 97.2 0.0015 5.2E-08 50.1 8.3 82 3-95 17-108 (111)
49 2qjc_A Diadenosine tetraphosph 97.2 0.00029 1E-08 63.8 4.7 68 98-176 18-85 (262)
50 1x4y_A Biregional cell adhesio 97.1 0.0037 1.3E-07 48.4 9.7 81 3-94 15-110 (114)
51 2djs_A Ephrin type-B receptor 97.0 0.0012 4E-08 50.6 6.2 78 5-93 16-103 (108)
52 2ie4_C PP2A-alpha;, serine/thr 97.0 0.00086 2.9E-08 62.0 5.7 71 98-176 49-121 (309)
53 2edy_A Receptor-type tyrosine- 96.9 0.00074 2.5E-08 51.1 4.4 76 3-91 15-102 (103)
54 2dm4_A Sortilin-related recept 96.9 0.0038 1.3E-07 47.7 8.4 71 8-91 21-101 (108)
55 1x4x_A Fibronectin type-III do 96.9 0.0019 6.7E-08 49.3 6.4 73 8-93 19-101 (106)
56 1x5a_A Ephrin type-A receptor 96.9 0.0028 9.5E-08 48.7 7.2 75 6-95 19-104 (107)
57 3e0j_A DNA polymerase subunit 96.8 0.0094 3.2E-07 57.9 12.1 178 96-301 198-420 (476)
58 1x5f_A Neogenin; RGM binding, 96.8 0.0036 1.2E-07 48.7 7.3 79 4-92 25-114 (120)
59 3h63_A Serine/threonine-protei 96.8 0.0018 6.1E-08 59.9 6.2 72 98-176 59-132 (315)
60 2haz_A N-CAM 1, neural cell ad 96.8 0.004 1.4E-07 47.4 7.3 77 7-91 17-104 (105)
61 1x5j_A Neogenin; RGM binding, 96.8 0.0014 4.9E-08 50.9 4.8 78 4-92 16-107 (113)
62 1fjm_A Protein serine/threonin 96.7 0.0016 5.4E-08 60.7 5.6 70 99-176 57-128 (330)
63 2db8_A Tripartite motif protei 96.7 0.0023 8E-08 49.3 5.7 74 8-93 22-105 (110)
64 3icf_A PPT, serine/threonine-p 96.7 0.0024 8.2E-08 59.5 6.6 73 97-176 62-136 (335)
65 2ee2_A Contactin-1; neural cel 96.6 0.0037 1.3E-07 48.7 6.4 76 9-93 31-114 (119)
66 2z72_A Protein-tyrosine-phosph 96.6 0.0018 6.3E-08 60.9 5.3 73 97-176 69-153 (342)
67 2e7h_A Ephrin type-B receptor 96.6 0.0025 8.7E-08 48.9 5.3 75 6-93 17-104 (109)
68 2dle_A Receptor-type tyrosine- 96.6 0.0043 1.5E-07 47.5 6.5 76 3-93 14-98 (104)
69 2ed8_A Netrin receptor DCC; tu 96.6 0.0093 3.2E-07 45.2 8.4 77 3-92 14-100 (106)
70 1wk0_A KIAA0970 protein; fibro 96.6 0.0033 1.1E-07 50.7 5.9 77 5-92 26-121 (137)
71 1wao_1 Serine/threonine protei 96.5 0.0033 1.1E-07 62.0 6.9 72 98-176 212-285 (477)
72 2dkm_A Collagen alpha-1(XX) ch 96.5 0.0048 1.6E-07 47.0 6.3 81 3-93 15-100 (104)
73 2crz_A Fibronectin type-III do 96.5 0.0084 2.9E-07 45.9 7.8 75 7-93 20-105 (110)
74 2ed7_A Netrin receptor DCC; tu 96.5 0.006 2.1E-07 47.3 6.9 76 7-92 28-113 (119)
75 1x5z_A Receptor-type tyrosine- 96.5 0.0047 1.6E-07 47.6 6.0 79 3-93 24-110 (115)
76 3e7a_A PP-1A, serine/threonine 96.5 0.0029 9.8E-08 58.0 5.4 69 100-176 57-127 (299)
77 1x5g_A Neogenin; RGM binding, 96.5 0.0039 1.3E-07 48.2 5.4 71 9-92 30-110 (116)
78 3ll8_A Serine/threonine-protei 96.4 0.0034 1.2E-07 58.8 5.6 70 99-176 70-141 (357)
79 1x5x_A Fibronectin type-III do 96.4 0.0086 2.9E-07 45.7 7.1 74 8-92 19-103 (109)
80 2rb8_A Tenascin; beta sheet,lo 96.3 0.03 1E-06 42.4 9.8 80 3-93 9-95 (104)
81 1wfo_A Sidekick 2; FN3, cell a 96.3 0.0056 1.9E-07 48.4 5.9 77 8-93 39-125 (130)
82 3n1f_C Cell adhesion molecule- 96.3 0.019 6.5E-07 43.4 8.6 73 6-89 14-101 (102)
83 1aui_A Calcineurin, serine/thr 96.3 0.0038 1.3E-07 61.1 5.5 70 99-176 83-154 (521)
84 2kbg_A N-CAM 2, neural cell ad 96.3 0.0097 3.3E-07 46.3 6.8 75 9-93 20-103 (114)
85 2dju_A Receptor-type tyrosine- 96.3 0.009 3.1E-07 45.1 6.4 76 5-92 16-100 (106)
86 2ee3_A Collagen alpha-1(XX) ch 96.2 0.026 9E-07 43.3 8.8 81 2-93 13-99 (108)
87 1wfu_A Unnamed protein product 96.2 0.009 3.1E-07 47.0 6.2 76 5-92 24-114 (120)
88 3b83_A Ten-D3; beta sheet, com 96.2 0.037 1.3E-06 41.5 9.5 66 3-78 8-74 (100)
89 2cui_A Tenascin-X; fibronectin 96.1 0.0098 3.3E-07 46.1 6.1 83 2-93 14-109 (112)
90 1ujt_A KIAA1568 protein; fibro 96.1 0.028 9.4E-07 44.1 8.6 76 7-92 26-114 (120)
91 2ibg_A CG9211-PA, GH03927P; IH 96.1 0.03 1E-06 48.1 9.6 77 5-91 124-212 (214)
92 3tes_A Tencon; fibronectin typ 96.0 0.029 9.9E-07 42.0 8.0 66 2-78 7-74 (98)
93 1va9_A DOWN syndrome cell adhe 96.0 0.0086 2.9E-07 46.5 5.1 84 3-92 22-117 (122)
94 2ed9_A Netrin receptor DCC; tu 95.9 0.008 2.7E-07 47.0 4.8 71 9-91 41-123 (124)
95 2dn7_A Receptor-type tyrosine- 95.9 0.041 1.4E-06 41.5 8.5 71 9-91 19-99 (107)
96 2dmk_A Midline 2 isoform 2; mi 95.8 0.013 4.5E-07 46.3 5.7 77 4-92 24-118 (127)
97 2yrz_A Integrin beta-4; GP150, 95.8 0.016 5.6E-07 44.7 6.1 66 3-78 24-92 (118)
98 2dlh_A Receptor-type tyrosine- 95.8 0.0079 2.7E-07 46.7 4.1 81 3-92 25-115 (121)
99 2gee_A Hypothetical protein; f 95.8 0.05 1.7E-06 46.5 9.7 94 3-106 29-127 (203)
100 3p4l_A Neogenin; iron homeosta 95.8 0.065 2.2E-06 45.8 10.4 79 3-92 11-103 (211)
101 1x5h_A Neogenin; RGM binding, 95.7 0.025 8.6E-07 44.6 7.1 80 3-92 25-116 (132)
102 3teu_A Fibcon; FN3 domain, fib 95.7 0.026 8.9E-07 42.0 6.8 66 3-78 8-74 (98)
103 2e3v_A Neural cell adhesion mo 95.7 0.037 1.3E-06 43.2 7.8 76 9-92 20-106 (122)
104 2edx_A Protein tyrosine phosph 95.7 0.03 1E-06 44.2 7.4 82 3-92 25-118 (134)
105 1x3d_A Fibronectin type-III do 95.7 0.018 6.1E-07 44.5 5.9 73 8-92 29-112 (118)
106 2cum_A Tenascin-X; hexabrachio 95.7 0.075 2.6E-06 40.2 9.4 79 2-92 13-97 (105)
107 3k2m_C Monobody HA4; engineere 95.7 0.022 7.4E-07 43.0 6.1 65 3-78 11-79 (101)
108 2cuh_A Tenascin-X; fibronectin 95.6 0.12 4.1E-06 39.7 10.5 79 2-92 13-97 (115)
109 1x4z_A Biregional cell adhesio 95.4 0.03 1E-06 43.5 6.1 65 5-78 26-95 (121)
110 2h41_A Fibronectin; beta sandw 95.4 0.02 6.8E-07 42.9 4.8 66 2-78 11-78 (95)
111 3f7q_A Integrin beta-4, GP150; 95.3 0.089 3.1E-06 45.9 9.8 78 3-91 12-96 (234)
112 1qr4_A Protein (tenascin); fib 95.3 0.06 2E-06 45.0 8.3 79 3-92 101-185 (186)
113 3t04_D Monobody 7C12; engineer 95.3 0.015 5.1E-07 44.1 4.0 66 3-78 14-83 (103)
114 1wis_A KIAA1514 protein; FNIII 95.3 0.065 2.2E-06 41.8 7.9 82 3-92 24-119 (124)
115 2yuw_A Myosin binding protein 95.2 0.022 7.5E-07 43.4 4.7 66 3-78 14-84 (110)
116 2crm_A Fibronectin type-III do 95.1 0.023 7.7E-07 44.1 4.7 72 9-92 31-114 (120)
117 2ic2_A CG9211-PA, GH03927P; IH 95.1 0.12 4E-06 40.0 8.7 70 8-78 14-90 (115)
118 1k85_A Chitinase A1; fibronect 95.1 0.086 2.9E-06 38.3 7.5 61 3-78 10-70 (88)
119 1uc6_A CNTF receptor, ciliary 95.0 0.069 2.4E-06 40.7 7.2 69 9-89 22-105 (109)
120 2dbj_A Proto-oncogene tyrosine 95.0 0.081 2.8E-06 41.2 7.7 34 60-93 80-119 (124)
121 3qht_C Monobody YSMB-1; fibron 95.0 0.035 1.2E-06 41.4 5.2 65 3-78 11-77 (97)
122 3qwq_B Adnectin; cell surface 95.0 0.057 1.9E-06 41.7 6.6 65 3-78 10-76 (114)
123 1v5j_A KIAA1355 protein, RSGI 94.9 0.032 1.1E-06 42.8 5.0 79 3-92 14-102 (108)
124 1uem_A KIAA1568 protein; immun 94.9 0.023 7.8E-07 43.7 4.1 61 7-78 26-91 (117)
125 1uen_A KIAA0343 protein; immun 94.9 0.022 7.5E-07 44.4 4.0 79 8-92 26-119 (125)
126 1x5y_A Myosin binding protein 94.9 0.016 5.5E-07 44.3 3.1 66 3-78 15-85 (111)
127 2ocf_D Fibronectin; estrogen r 94.9 0.077 2.6E-06 41.4 7.1 66 3-78 35-101 (121)
128 1j8k_A Fibronectin; EDA, TYPEI 94.8 0.037 1.3E-06 40.8 4.8 66 3-78 8-74 (94)
129 1uey_A KIAA0343 protein; immun 94.7 0.14 4.9E-06 39.9 8.5 79 3-92 23-114 (127)
130 1bpv_A Titin, A71, connectin; 94.7 0.027 9.3E-07 43.4 4.0 60 9-78 23-87 (112)
131 1wfn_A Sidekick 2; FN3, cell a 94.7 0.084 2.9E-06 40.6 6.9 66 3-78 24-93 (119)
132 2qbw_A PDZ-fibronectin fusion 94.6 0.055 1.9E-06 46.1 6.2 63 6-78 113-176 (195)
133 2vkw_A Neural cell adhesion mo 94.6 0.16 5.4E-06 43.2 9.1 74 12-92 23-107 (209)
134 3r8q_A Fibronectin; heparin, F 94.3 0.22 7.5E-06 44.8 10.0 89 3-102 27-122 (290)
135 1wf5_A Sidekick 2 protein; FNI 94.2 0.063 2.2E-06 41.4 5.2 65 4-78 27-95 (121)
136 3n06_B PRL-R, prolactin recept 94.1 0.17 5.9E-06 43.2 8.3 70 10-91 120-204 (210)
137 1bqu_A Protein (GP130); cytoki 94.1 0.055 1.9E-06 46.4 5.0 75 9-91 118-205 (215)
138 2yux_A Myosin-binding protein 94.0 0.049 1.7E-06 42.3 4.2 61 8-79 29-94 (120)
139 2ha1_A Fibronectin; beta sandw 93.8 0.2 6.8E-06 42.4 8.1 66 2-78 5-75 (201)
140 3mpc_A FN3-like protein; fibro 93.8 0.14 4.8E-06 38.7 6.3 57 10-78 19-76 (103)
141 1cd9_B G-CSF-R, protein (G-CSF 93.7 0.27 9.4E-06 42.0 9.0 73 9-91 127-213 (215)
142 3lpw_A A77-A78 domain from tit 93.7 0.17 5.8E-06 42.3 7.3 65 3-78 12-81 (197)
143 3p4l_A Neogenin; iron homeosta 93.6 0.12 4.1E-06 44.1 6.3 73 10-91 121-204 (211)
144 1tdq_A Tenascin-R; extracellul 93.5 0.37 1.3E-05 43.0 9.8 90 6-105 114-209 (283)
145 2w1n_A O-GLCNACASE NAGJ; hexos 93.5 0.14 4.7E-06 44.1 6.2 74 4-90 158-237 (238)
146 3fl7_A Ephrin receptor; ATP-bi 93.5 0.15 5E-06 50.8 7.5 71 9-92 453-534 (536)
147 3t1w_A Four-domain fibronectin 93.4 0.18 6.2E-06 47.1 7.8 67 3-78 9-78 (375)
148 3mtr_A N-CAM-1, NCAM-1, neural 93.3 0.19 6.6E-06 42.8 7.1 78 10-94 126-214 (215)
149 1qr4_A Protein (tenascin); fib 93.2 0.37 1.3E-05 40.0 8.8 78 3-92 13-96 (186)
150 1i1r_A GP130, interleukin-6 re 93.1 0.12 4E-06 47.1 5.8 75 9-91 214-301 (303)
151 2jll_A NCAM2, neural cell adhe 93.1 0.16 5.6E-06 47.5 7.0 74 9-93 305-388 (389)
152 1tdq_A Tenascin-R; extracellul 93.0 0.39 1.3E-05 42.8 9.1 92 3-106 21-118 (283)
153 1cfb_A Drosophila neuroglian; 93.0 0.28 9.6E-06 41.5 7.7 74 7-90 115-202 (205)
154 3l5i_A Interleukin-6 receptor 92.9 0.14 4.9E-06 45.9 6.0 72 8-91 208-290 (290)
155 2vkw_A Neural cell adhesion mo 92.9 0.31 1.1E-05 41.4 7.9 62 6-78 119-184 (209)
156 2gee_A Hypothetical protein; f 92.8 0.26 8.9E-06 41.8 7.3 62 7-78 124-187 (203)
157 3r8q_A Fibronectin; heparin, F 92.6 0.3 1E-05 43.9 7.8 87 7-106 123-215 (290)
158 1cfb_A Drosophila neuroglian; 92.5 0.33 1.1E-05 41.0 7.6 79 3-92 12-102 (205)
159 3lpw_A A77-A78 domain from tit 92.5 0.24 8.3E-06 41.2 6.6 59 8-78 114-177 (197)
160 2edb_A Netrin receptor DCC; tu 92.2 0.21 7.3E-06 38.3 5.3 56 11-78 31-90 (116)
161 1q38_A Fibronectin; amyloid fi 91.3 0.085 2.9E-06 37.3 1.8 66 15-91 2-75 (89)
162 2b5i_B Interleukin-2 receptor 91.2 0.35 1.2E-05 41.8 6.2 74 10-92 119-208 (214)
163 2d9q_B Granulocyte colony-stim 91.1 0.71 2.4E-05 42.0 8.5 73 10-92 222-308 (313)
164 3up1_A Interleukin-7 receptor 90.8 0.69 2.4E-05 40.3 7.7 72 10-92 127-215 (223)
165 2ha1_A Fibronectin; beta sandw 90.7 0.38 1.3E-05 40.6 5.9 65 4-78 119-184 (201)
166 1fnf_A Fibronectin; RGD, extra 90.7 0.41 1.4E-05 44.5 6.7 66 4-78 9-77 (368)
167 1oww_A FN, fibronectin first t 90.6 1.6 5.3E-05 31.9 7.9 70 9-89 19-96 (98)
168 1axi_B HGHBP, growth hormone r 90.1 0.18 6.2E-06 44.3 3.4 67 12-90 152-234 (236)
169 1eer_B Epobp, erythropoietin r 89.9 1.3 4.4E-05 38.3 8.8 71 10-90 136-222 (227)
170 3f7q_A Integrin beta-4, GP150; 89.8 0.16 5.4E-06 44.3 2.7 80 8-92 110-200 (234)
171 2ekj_A Collagen alpha-1(XX) ch 89.4 0.043 1.5E-06 41.6 -1.2 65 3-78 14-80 (105)
172 3t1w_A Four-domain fibronectin 89.2 1 3.5E-05 41.9 8.1 65 3-78 284-350 (375)
173 1wj3_A KIAA1496 protein; beta 89.1 1.5 5.1E-05 33.6 7.6 69 9-91 30-110 (117)
174 3csg_A MBP, maltose-binding pr 88.9 0.37 1.3E-05 46.8 4.9 63 5-78 378-443 (461)
175 2ibg_A CG9211-PA, GH03927P; IH 88.8 0.46 1.6E-05 40.3 4.9 69 9-78 14-89 (214)
176 1fnf_A Fibronectin; RGD, extra 88.4 2.6 8.9E-05 38.9 10.3 92 3-106 192-289 (368)
177 1n26_A IL-6 receptor alpha cha 88.2 1.4 4.7E-05 40.4 8.1 58 10-78 212-275 (325)
178 3lqm_A Interleukin-10 receptor 87.0 1.1 3.9E-05 37.9 6.3 70 10-92 105-196 (201)
179 1x5i_A Neogenin; RGM binding, 86.7 0.94 3.2E-05 35.1 5.2 56 11-78 41-100 (126)
180 1zlg_A Anosmin 1; insulin-like 86.6 2.2 7.4E-05 43.7 9.2 35 58-92 333-376 (680)
181 3uto_A Twitchin; kinase, muscl 85.7 1.6 5.5E-05 43.7 7.5 61 6-78 19-84 (573)
182 4doh_R Interleukin-20 receptor 84.7 4.3 0.00015 35.0 8.9 70 10-92 120-214 (221)
183 3s98_A Interferon alpha/beta r 84.2 8.1 0.00028 34.9 11.0 67 11-91 114-199 (306)
184 3l5i_A Interleukin-6 receptor 84.2 5.1 0.00017 35.4 9.6 61 11-78 115-176 (290)
185 2jll_A NCAM2, neural cell adhe 84.1 5.8 0.0002 36.6 10.3 73 9-92 208-291 (389)
186 3v6o_A Leptin receptor; recept 83.9 2 6.9E-05 36.4 6.4 59 10-78 124-186 (206)
187 3tgx_A Interleukin-21 receptor 83.5 1.7 5.7E-05 37.5 5.7 76 10-92 112-209 (219)
188 3se4_A Interferon alpha/beta r 83.5 6 0.00021 37.4 10.2 68 10-91 117-203 (414)
189 1iar_B Protein (interleukin-4 82.7 3.2 0.00011 35.3 7.1 82 3-92 104-201 (207)
190 2q7n_A Leukemia inhibitory fac 82.5 2 6.9E-05 42.1 6.4 81 5-92 395-487 (488)
191 3l5h_A Interleukin-6 receptor 82.1 0.57 2E-05 46.7 2.5 79 6-92 210-301 (589)
192 4doh_B Interleukin-20 receptor 82.1 2.3 7.8E-05 36.3 6.0 72 10-91 121-200 (206)
193 1zlg_A Anosmin 1; insulin-like 81.9 2.2 7.5E-05 43.6 6.8 64 3-78 167-242 (680)
194 3e0g_A Leukemia inhibitory fac 81.6 0.72 2.5E-05 45.2 2.9 82 3-91 388-481 (483)
195 2erj_C Cytokine receptor commo 79.9 4 0.00014 35.9 6.9 70 10-91 150-233 (247)
196 2dtg_E Insulin receptor; IR ec 78.7 0.27 9.3E-06 52.3 -1.4 34 59-92 549-593 (897)
197 2b5i_C Cytokine receptor commo 75.1 5.3 0.00018 33.5 6.1 69 10-90 112-194 (199)
198 4go6_B HCF C-terminal chain 1; 74.4 2.6 8.9E-05 36.5 4.0 32 60-91 47-84 (232)
199 2v5y_A Receptor-type tyrosine- 73.8 3 0.0001 42.8 5.0 79 7-91 370-459 (731)
200 3fl7_A Ephrin receptor; ATP-bi 72.9 5.4 0.00018 39.5 6.3 84 8-92 344-442 (536)
201 1g5b_A Serine/threonine protei 72.6 2.2 7.5E-05 36.7 3.1 16 284-299 176-191 (221)
202 3bpo_C Interleukin-13 receptor 72.5 7.7 0.00026 35.0 7.0 67 10-77 212-285 (314)
203 3flo_A DNA polymerase alpha su 71.9 15 0.00052 35.3 9.0 80 97-176 146-247 (460)
204 2nzi_A Titin; IG-domain, FNIII 71.9 13 0.00045 32.7 8.3 60 7-78 209-273 (305)
205 2gys_A Cytokine receptor commo 69.4 20 0.00069 33.7 9.4 85 11-105 122-228 (419)
206 1bqu_A Protein (GP130); cytoki 68.0 3.7 0.00013 34.6 3.5 59 9-78 20-82 (215)
207 4go6_B HCF C-terminal chain 1; 66.6 7.9 0.00027 33.3 5.4 29 63-91 167-201 (232)
208 2dtg_E Insulin receptor; IR ec 61.9 1.1 3.7E-05 47.6 -1.4 34 60-94 852-891 (897)
209 2gys_A Cytokine receptor commo 56.7 7.2 0.00024 37.0 3.5 70 10-89 333-418 (419)
210 3se4_A Interferon alpha/beta r 56.6 2.3 7.9E-05 40.4 0.0 34 59-92 367-410 (414)
211 2v5y_A Receptor-type tyrosine- 56.2 39 0.0013 34.4 9.3 70 10-92 275-357 (731)
212 3b4n_A Endo-pectate lyase; pec 54.1 15 0.0005 33.5 4.8 56 9-78 29-90 (344)
213 3l5h_A Interleukin-6 receptor 54.0 23 0.00077 34.9 6.9 62 10-78 413-475 (589)
214 1i1r_A GP130, interleukin-6 re 46.6 13 0.00045 33.0 3.5 20 59-78 158-178 (303)
215 3g9v_A Interleukin 22 receptor 41.6 6.6 0.00023 33.5 0.5 19 60-78 173-191 (211)
216 2uvf_A Exopolygalacturonase; G 31.4 14 0.00047 37.2 1.0 35 58-92 112-153 (608)
217 3s9d_B Interferon alpha/beta r 22.5 64 0.0022 27.1 3.4 21 58-78 159-179 (199)
218 2mcm_A Macromomycin; apoprotei 20.7 87 0.003 23.5 3.4 25 54-78 13-37 (112)
No 1
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=1.7e-73 Score=563.46 Aligned_cols=401 Identities=70% Similarity=1.238 Sum_probs=344.1
Q ss_pred CeeeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcCC
Q 040421 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVGN 80 (407)
Q Consensus 1 v~l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~~ 80 (407)
|||++|++++++|+|+|.|.+.++.+.|+|++.++.+..++.|++++|.+.....+++|+|+|+||+|||+|+|||+.++
T Consensus 22 v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~~ 101 (424)
T 2qfp_A 22 VHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRN 101 (424)
T ss_dssp EEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCEEEEEECCSS
T ss_pred EEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCEEEEEECCCC
Confidence 69999999889999999998777789999999988777778787776665455678999999999999999999999988
Q ss_pred ceeeEEEEcCCCCCCCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh
Q 040421 81 ATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN 160 (407)
Q Consensus 81 ~s~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~ 160 (407)
+|+.++|+|+|.+++..++||+++||+|.......+++++.+...+|||||++||++|.++....+...|+.|.++++++
T Consensus 102 ~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~ 181 (424)
T 2qfp_A 102 TTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS 181 (424)
T ss_dssp SCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHH
Confidence 89999999999877778999999999998754455677776653489999999999998764333456899999999988
Q ss_pred hccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHh
Q 040421 161 AAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240 (407)
Q Consensus 161 ~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~ 240 (407)
.+.+|+++++||||+...+..++...|..|..+|.||..++....+.||+|++|+++||+||+...++...+|++||+++
T Consensus 182 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~ 261 (424)
T 2qfp_A 182 VAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKE 261 (424)
T ss_dssp HTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHH
T ss_pred HhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHH
Confidence 88899999999999964332233334667888899997665556788999999999999999987766678999999999
Q ss_pred ccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccC
Q 040421 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVS 320 (407)
Q Consensus 241 L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~ 320 (407)
|+++++++++|+||++|+|+++....++.++..+++.|+++|++++|+++|+||+|.|+|++|+++..+.+.+|.|.++.
T Consensus 262 L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~ 341 (424)
T 2qfp_A 262 LRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVK 341 (424)
T ss_dssp HHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEE
T ss_pred HhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCcccccc
Confidence 99976666789999999999987655555567789999999999999999999999999999998888777889998888
Q ss_pred CCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEecccCCCC
Q 040421 321 DQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSG 400 (407)
Q Consensus 321 ~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~~~~~~~ 400 (407)
++++++||++|+||+.++....+..++|+|++|+...+||++|++.|++++.++|+++.||++++.|+|+|.|++++|..
T Consensus 342 ~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~~~~~ 421 (424)
T 2qfp_A 342 DQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVD 421 (424)
T ss_dssp CTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTTCCCC
T ss_pred CCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEeccccccc
Confidence 89999999999999987654345567889999999899999999999999999999999999877899999999999976
Q ss_pred C
Q 040421 401 E 401 (407)
Q Consensus 401 ~ 401 (407)
+
T Consensus 422 ~ 422 (424)
T 2qfp_A 422 D 422 (424)
T ss_dssp C
T ss_pred c
Confidence 5
No 2
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=3.8e-73 Score=561.08 Aligned_cols=398 Identities=70% Similarity=1.267 Sum_probs=340.0
Q ss_pred CeeeccCCCCCcEEEEEEcC-CCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 1 v~l~~g~~~~~~~~v~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
|||+++++++++|+|+|.|. ..++.+.|+|+++++.+..++.++.++|++.+...+++|+|+|+||+|||+|+|||+.+
T Consensus 28 v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g 107 (426)
T 1xzw_A 28 VHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFG 107 (426)
T ss_dssp EEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEEEEEECCG
T ss_pred EEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCCEEEEEECCC
Confidence 69999999889999999998 77788999999998877778888777676555567899999999999999999999987
Q ss_pred CceeeEEEEcCCCCCCCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh
Q 040421 80 NATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER 159 (407)
Q Consensus 80 ~~s~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~ 159 (407)
.+|+.++|+|+|.+++..++||+++||+|.......+++++.+...+|||||++||++|.++....+...|+.|.+.+++
T Consensus 108 ~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~ 187 (426)
T 1xzw_A 108 DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSER 187 (426)
T ss_dssp GGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHH
T ss_pred CccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHH
Confidence 78999999999987777899999999999765445667777765348999999999999876433335679999999999
Q ss_pred hhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHH
Q 040421 160 NAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEK 239 (407)
Q Consensus 160 ~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~ 239 (407)
+.+.+|+++++||||+...+..++...+..|..+|.||.++++...+.||+|++|+++||+||+...+..+.+|++||++
T Consensus 188 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~ 267 (426)
T 1xzw_A 188 SVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTS 267 (426)
T ss_dssp HHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHH
T ss_pred HHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHH
Confidence 88899999999999996432222233566788889999876656678899999999999999998777778999999999
Q ss_pred hccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCccccc
Q 040421 240 EFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPV 319 (407)
Q Consensus 240 ~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~ 319 (407)
+|+++++++++|+||++|+|+|+....+..++..+++.|+++|++++|+++|+||+|.|+|++|+++.++.+.+|.|.++
T Consensus 268 ~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~ 347 (426)
T 1xzw_A 268 ELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPV 347 (426)
T ss_dssp HHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCE
T ss_pred HHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccc
Confidence 99997666788999999999998765455566778999999999999999999999999999999998877778888888
Q ss_pred CCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEecccCC
Q 040421 320 SDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKP 398 (407)
Q Consensus 320 ~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~~~~~ 398 (407)
.++++++||++|+||+.++....+..++|+|++|+...+||++|+|.|++++.++|+++.||++++.|+|+|.|++|.|
T Consensus 348 ~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~~~~ 426 (426)
T 1xzw_A 348 SDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYWAS 426 (426)
T ss_dssp ECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSCC--
T ss_pred cCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecccCC
Confidence 8899999999999999876533455578899999998999999999999999999999999996557999999999875
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=2.6e-39 Score=324.92 Aligned_cols=367 Identities=16% Similarity=0.160 Sum_probs=237.9
Q ss_pred eeccCCCCCcEEEEEEcCCCC---------CCCEEEEeecCCC--CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP---------GSNTVLYWAENST--LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTK 71 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~---------~~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 71 (407)
++.|++.++++ |.|.+.... ....|+|....+. ......+.+... ....++|+|.|+||+|+|.
T Consensus 13 vasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~----~~~~~t~~v~v~gL~P~t~ 87 (527)
T 2yeq_A 13 VASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAK----PSLAHSVHVEADGLEPNKV 87 (527)
T ss_dssp EEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEEC----GGGTTEEEEEECSCCTTCE
T ss_pred ccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEec----CCCceEEEeecCCcCCCCE
Confidence 56788877777 779996421 2346666554433 334444544332 3578999999999999999
Q ss_pred EEEEeCcC-CceeeEEEEcCCCCCCC-CCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCC----
Q 040421 72 YYYEVGVG-NATRQFSFTTPPGVGPD-VPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFH---- 145 (407)
Q Consensus 72 Y~Y~v~~~-~~s~~~~F~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~---- 145 (407)
|+||+..+ .+|++++|+|+|.+++. .++||+++||.+.......++.++.+. +|||+||+||++|+++....
T Consensus 88 Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~--~~D~vlhlGD~iY~d~~~~~~~~~ 165 (527)
T 2yeq_A 88 YYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKE--KLDLVFHLGDYIYEYGPNEYVSKT 165 (527)
T ss_dssp EEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTS--CCSEEEECSCSSCCCCTTSSCCTT
T ss_pred EEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhc--CCCEEEecCCcccCCCCCcccccc
Confidence 99999876 46899999999987553 689999999998754445677777764 89999999999999874210
Q ss_pred ---------CchhhhHHHH---------HHhhhhccCCeEEccCCCccccCCCCCCccc------c-----ccccccc-c
Q 040421 146 ---------DNNRWDTWGR---------FIERNAAYQPWIWTVGNHEIDFAPQLGEAIP------F-----KPFANRF-H 195 (407)
Q Consensus 146 ---------~~~~~~~~~~---------~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~------~-----~~~~~~f-~ 195 (407)
+...++.|.. .++.+.+.+|+++++||||+..+...+.... | .++..+| .
T Consensus 166 ~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~ 245 (527)
T 2yeq_A 166 GNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEH 245 (527)
T ss_dssp CCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHh
Confidence 0011222222 2456677899999999999964311110000 0 1222233 3
Q ss_pred cCCCC----CCCCCCeEEEEecCc-EEEEEEeccccC----------------------CCChHHHHHHHHhccccCCCC
Q 040421 196 LPYRA----PYSTAPFWYSIRRAS-AHIIVMSCYSAF----------------------GKYTPQYKWLEKEFPKVNRSE 248 (407)
Q Consensus 196 ~P~~~----~~~~~~~~ysf~~g~-v~fi~Lds~~~~----------------------~~~~~Q~~WL~~~L~~~~~~~ 248 (407)
||... .+.....||+|++|+ ++||+||+...- ..+.+|++||+++|++ ++
T Consensus 246 ~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~ 322 (527)
T 2yeq_A 246 MPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS---ST 322 (527)
T ss_dssp SCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH---CC
T ss_pred CCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc---CC
Confidence 45431 112456899999999 999999995311 1368999999999997 56
Q ss_pred CCeEEEEeeccccccCCC----------CCCCChhHHHHHHHHHHhCCCc--EEEeccccccccccccccceeeccCCcc
Q 040421 249 TPWLIVLMHCPLYNSYVH----------HYMEGEPMRVLYEPWFVEYKVD--VVFAAHVHAYERSERMSNIAYNVTNALC 316 (407)
Q Consensus 249 ~~~~iv~~H~P~~~~~~~----------~~~~~~~~~~~l~~l~~~~~vd--lvl~GH~H~y~r~~~~~~~~~~~~~g~~ 316 (407)
++|+||++|+|++..... .+......|+.|.++|.+++|+ +||+||+|.+++.......
T Consensus 323 a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~--------- 393 (527)
T 2yeq_A 323 AHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDF--------- 393 (527)
T ss_dssp SSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESST---------
T ss_pred CCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccc---------
Confidence 889999999999875421 1112245789999999999984 9999999999998632110
Q ss_pred cccCCCC----CceEEEeCC--CCCCCCCc---ccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcC-----CCc
Q 040421 317 SPVSDQS----APVYITIGD--GGNQEGLA---KEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQ-----DDY 382 (407)
Q Consensus 317 ~~~~~~~----g~~~iv~G~--gG~~~~~~---~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~-----~g~ 382 (407)
.+++ ++-+++++- +|...... ..+...+| ...|.....||.+|+| +...++++|+... ++.
T Consensus 394 ---~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np-~~~~~~~~~Gy~~v~v-t~~~~~~~~~~v~~v~~~~~~ 468 (527)
T 2yeq_A 394 ---EKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENP-HIQFFNDYRGYVRCTV-TPHQWKADYRVMPFVTEPGAA 468 (527)
T ss_dssp ---TCTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCT-TEEEEEBCEEEEEEEE-ETTEEEEEEEEESCSSSSCCC
T ss_pred ---cCCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCC-cceeeeCCCCEEEEEE-eccEEEEEEEEeCCccCCCCc
Confidence 1112 233332222 11110000 00001233 3345556789999999 4667888886433 344
Q ss_pred eeeeeeEEEEe
Q 040421 383 AVEADSVWLHN 393 (407)
Q Consensus 383 ~~~~D~~~i~~ 393 (407)
+...=+|++..
T Consensus 469 ~~~~~~~~~~~ 479 (527)
T 2yeq_A 469 ISTRASFVYQK 479 (527)
T ss_dssp CEEEEEEEECS
T ss_pred ceeeeEEEEeC
Confidence 44445566533
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.9e-40 Score=310.26 Aligned_cols=259 Identities=14% Similarity=0.199 Sum_probs=190.0
Q ss_pred CCcEEEEEecCCCCCCchhh----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhH-HHHHHhhh--hccCCeEEc
Q 040421 97 VPYTFGLIGDLGQTYYSNRT----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDT-WGRFIERN--AAYQPWIWT 169 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~-~~~~~~~~--~~~~P~~~~ 169 (407)
..+||+++||+|.+...+.. |.++.+. .+|||||++||++|. |..+.++..|.+ |.+.++.+ ...+||+++
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~v 79 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTV 79 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTTCSEEEEC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhhCCCEEEe
Confidence 47999999999986544332 3334444 489999999999998 654334556654 33344333 346899999
Q ss_pred cCCCccccCCCCCCcccc-------------------cccccccccCCCCCCCCCCeEEEE----ec---------C---
Q 040421 170 VGNHEIDFAPQLGEAIPF-------------------KPFANRFHLPYRAPYSTAPFWYSI----RR---------A--- 214 (407)
Q Consensus 170 ~GNHD~~~~~~~~~~~~~-------------------~~~~~~f~~P~~~~~~~~~~~ysf----~~---------g--- 214 (407)
+||||+..+. ..+..+ .....+|.||. .||++ .. |
T Consensus 80 lGNHD~~~~~--~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~ 149 (342)
T 3tgh_A 80 LGTRDWTGNY--NAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKD 149 (342)
T ss_dssp CCHHHHTSCH--HHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEE
T ss_pred CCCCccCCCc--hHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCC
Confidence 9999996321 111111 22457788885 57765 22 3
Q ss_pred -cEEEEEEeccccCC----------CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHH
Q 040421 215 -SAHIIVMSCYSAFG----------KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFV 283 (407)
Q Consensus 215 -~v~fi~Lds~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~ 283 (407)
.++||+|||..... ...+|++||+++|+. ++|+||++|||+|+.+.. .....+++.|.++|+
T Consensus 150 ~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~ 222 (342)
T 3tgh_A 150 LAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLK 222 (342)
T ss_dssp EEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHH
T ss_pred ceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHH
Confidence 48999999964221 125899999999943 469999999999987643 334667899999999
Q ss_pred hCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEE
Q 040421 284 EYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGIL 363 (407)
Q Consensus 284 ~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l 363 (407)
+++|+++|+||+|.|+|..+ +++.||++|+||..... .. ..++|+.|+...+||+++
T Consensus 223 ~~~VdlvlsGH~H~~~~~~~-------------------~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l 279 (342)
T 3tgh_A 223 DAEVDLYISGHDNNMEVIED-------------------NDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVH 279 (342)
T ss_dssp HTTCCEEEECSSSSEEEEEE-------------------TTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEE
T ss_pred HcCCCEEEECCCcceeEEee-------------------CCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEE
Confidence 99999999999999999973 45899999999875431 11 234688888888999999
Q ss_pred EEeeccEEEEEEEEcCCCceeeeeeEEEEecccCCCC
Q 040421 364 DVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSG 400 (407)
Q Consensus 364 ~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~~~~~~~ 400 (407)
++ +++.+.++|+.+.+|+++ |+|+|.|+..++.+
T Consensus 280 ~v-~~~~l~~~~~~~~~G~vl--d~~~i~k~~~~~~~ 313 (342)
T 3tgh_A 280 EL-SNNGIVTKFVSSKKGEVI--YTHKLNIKKKKTLD 313 (342)
T ss_dssp EE-ETTEEEEEEEETTTTEEE--EEEEEECCCCSSCC
T ss_pred EE-ECCEEEEEEEECCCCcEE--EEEEEECCCCcccc
Confidence 99 466799999876899986 99999998766544
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=100.00 E-value=1.6e-33 Score=265.87 Aligned_cols=263 Identities=16% Similarity=0.253 Sum_probs=175.3
Q ss_pred CCcEEEEEecCCCCCCc----------hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh----c
Q 040421 97 VPYTFGLIGDLGQTYYS----------NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA----A 162 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~----------~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~----~ 162 (407)
..+||+++||+|..... ...+.++++. .+|||||++||++|..+........ |.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~~---~~~~~~~~~~~~~l 80 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKR---FQETFEDVFSDPSL 80 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTH---HHHHTTTTSCSGGG
T ss_pred CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchHH---HHHHHHHHcCchhh
Confidence 58999999999987421 1223333333 3899999999999987643222223 333333321 2
Q ss_pred -cCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEec------CcEEEEEEeccccC--------
Q 040421 163 -YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRR------ASAHIIVMSCYSAF-------- 227 (407)
Q Consensus 163 -~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~------g~v~fi~Lds~~~~-------- 227 (407)
.+|+++++||||+..+ ......|.....+|.+| ..||++.+ ++++||+||+....
T Consensus 81 ~~~p~~~v~GNHD~~~~--~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~ 150 (313)
T 1ute_A 81 RNVPWHVLAGNHDHLGN--VSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 150 (313)
T ss_dssp TTCCEEECCCHHHHHSC--HHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred cCCCEEEECCCCccCCC--ccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccc
Confidence 6899999999998531 11111122223445555 35788887 48999999985410
Q ss_pred ---------CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 228 ---------GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 228 ---------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
....+|++||++.|++. +.+|+||++|+|+++.... .....+++.|.++|++++|+++|+||+|.+
T Consensus 151 ~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 151 QQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred cccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 01468999999999984 3479999999999876542 223456788999999999999999999999
Q ss_pred ccccccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeC----cceEEEEEEeeccEEEEE
Q 040421 299 ERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREA----SFGHGILDVKNRTHAYFG 374 (407)
Q Consensus 299 ~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~----~~Gf~~l~v~~~~~~~~~ 374 (407)
++..+ .+|+.||++|++|.............+.+..|... ..||++|++. ++.+.++
T Consensus 226 ~~~~~------------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~-~~~~~~~ 286 (313)
T 1ute_A 226 QYLQD------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEIT-PKEMSVT 286 (313)
T ss_dssp EEEEC------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEEC-SSCEEEE
T ss_pred hhccC------------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEE-cCEEEEE
Confidence 98863 25788999999886533210000001124444332 3799999995 5568999
Q ss_pred EEEcCCCceeeeeeEEEEecccCCCCC
Q 040421 375 WHRNQDDYAVEADSVWLHNRYWKPSGE 401 (407)
Q Consensus 375 ~~~~~~g~~~~~D~~~i~~~~~~~~~~ 401 (407)
|+. .+|+++ |+|+|.|+. .|++.
T Consensus 287 ~~~-~~g~~~--~~~~l~~~~-~~~~~ 309 (313)
T 1ute_A 287 YIE-ASGKSL--FKTKLPRRA-RSEHQ 309 (313)
T ss_dssp EEE-TTSCEE--EEEEECCCC------
T ss_pred EEc-CCCcEE--EEEEecccc-Cchhh
Confidence 986 589976 999998864 34433
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.92 E-value=7.1e-24 Score=201.54 Aligned_cols=240 Identities=16% Similarity=0.133 Sum_probs=156.4
Q ss_pred CCCcEEEEEecCCCCCCc---------hh----hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc
Q 040421 96 DVPYTFGLIGDLGQTYYS---------NR----TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA 162 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~---------~~----~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 162 (407)
...+||++++|+|..... .. .++.+.+...++|+||++||+++... ...+..+.+.++.+..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~l~~ 97 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-----PAAYRKLRGLVEPFAA 97 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC-----HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHHHHh
Confidence 468999999999975321 22 23334431138999999999996422 3456666677776633
Q ss_pred --cCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC----CCChHHHHH
Q 040421 163 --YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF----GKYTPQYKW 236 (407)
Q Consensus 163 --~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~----~~~~~Q~~W 236 (407)
.+|+++++||||+.. .+...+... .......+|++++++++|++||+.... ....+|++|
T Consensus 98 ~~~~pv~~v~GNHD~~~-----------~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~w 163 (330)
T 3ib7_A 98 QLGAELVWVMGNHDDRA-----------ELRKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGW 163 (330)
T ss_dssp HHTCEEEECCCTTSCHH-----------HHHHHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHH
T ss_pred hcCCCEEEeCCCCCCHH-----------HHHHHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHH
Confidence 689999999999731 121111110 011235679999999999999996421 246899999
Q ss_pred HHHhccccCCCCCCeEEEEeeccccccCCCCC-CCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCc
Q 040421 237 LEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY-MEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNAL 315 (407)
Q Consensus 237 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~ 315 (407)
|++.|+... ...+|+++|||++....... ......++.+.+++++++++++|+||+|..+...
T Consensus 164 l~~~l~~~~---~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~------------- 227 (330)
T 3ib7_A 164 LAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT------------- 227 (330)
T ss_dssp HHHHTTSCC---TTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE-------------
T ss_pred HHHHHHhcc---cCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce-------------
Confidence 999999852 23488899999876542211 0111235678899999999999999999887443
Q ss_pred ccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCc
Q 040421 316 CSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDY 382 (407)
Q Consensus 316 ~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~ 382 (407)
.+++.++++|+.+..... ..+. ..........||..|++.+++ +.++++.-..+.
T Consensus 228 ------~~g~~~~~~gs~~~~~~~----~~~~-g~~~~~~~~~gy~iv~i~~~~-~~~~~v~~~~~~ 282 (330)
T 3ib7_A 228 ------FVGIPVSVASATCYTQDL----TVAA-GGTRGRDGAQGCNLVHVYPDT-VVHSVIPLGGGE 282 (330)
T ss_dssp ------ETTEEEEECCCSSCEECT----TSCT-TCCCEESCSCEEEEEEECSSC-EEEEEEECSCCC
T ss_pred ------ECCEEEEecCcceeccCC----CCCC-cceeccCCCCceEEEEEECCC-eEEEEeccCCCC
Confidence 145678888877653221 0011 112222345799999996544 778887644433
No 7
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.90 E-value=4.2e-23 Score=190.91 Aligned_cols=233 Identities=11% Similarity=0.045 Sum_probs=147.2
Q ss_pred cEEEEEecCCCCCC---------chhhHH----HhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCC
Q 040421 99 YTFGLIGDLGQTYY---------SNRTLT----HYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQP 165 (407)
Q Consensus 99 ~~f~~~gD~~~~~~---------~~~~l~----~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P 165 (407)
+||++++|+|.... ....++ .+.+...++|+||++||+++... ...++.+.+.++.+ .+|
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~l--~~p 73 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-----PEEYQVARQILGSL--NYP 73 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-----HHHHHHHHHHHTTC--SSC
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHhc--CCC
Confidence 58999999998742 122333 33333126899999999996421 23455566666654 579
Q ss_pred eEEccCCCccccCCCCCCccccccccccc-ccCCCCCCCCCCeEEEEecCcEEEEEEeccccC----CCChHHHHHHHHh
Q 040421 166 WIWTVGNHEIDFAPQLGEAIPFKPFANRF-HLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF----GKYTPQYKWLEKE 240 (407)
Q Consensus 166 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~f-~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~----~~~~~Q~~WL~~~ 240 (407)
+++++||||.... .. ..+...| .++.+ .+..+|+++.++++|++||+.... ....+|++||++.
T Consensus 74 ~~~v~GNHD~~~~--~~-----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~ 142 (274)
T 3d03_A 74 LYLIPGNHDDKAL--FL-----EYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (274)
T ss_dssp EEEECCTTSCHHH--HH-----HHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred EEEECCCCCCHHH--HH-----HHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHH
Confidence 9999999998421 00 0111111 11111 023578999999999999996421 2367999999999
Q ss_pred ccccCCCCCCeEEEEeeccccccCCCCC-CCChhHHHHHHHHHHhC-CCcEEEeccccccccccccccceeeccCCcccc
Q 040421 241 FPKVNRSETPWLIVLMHCPLYNSYVHHY-MEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSERMSNIAYNVTNALCSP 318 (407)
Q Consensus 241 L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~ 318 (407)
|++. +.+++|+++|+|++....... .......+.+.++++++ +|+++|+||+|..+...
T Consensus 143 l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~---------------- 203 (274)
T 3d03_A 143 LFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ---------------- 203 (274)
T ss_dssp HHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE----------------
T ss_pred HHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe----------------
Confidence 9874 345899999999987543210 00112245788999999 89999999999987653
Q ss_pred cCCCCCceEEEeCCCCCCCCCcccCCCCCCCc-cceeeCcceEEEEEEeeccEEEEEEEEc
Q 040421 319 VSDQSAPVYITIGDGGNQEGLAKEMTEPQPRY-SAYREASFGHGILDVKNRTHAYFGWHRN 378 (407)
Q Consensus 319 ~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~-~~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 378 (407)
.+++.++++++.+..... . .+.+ ..+.....||..+++.++ .+.++|++.
T Consensus 204 ---~~g~~~~~~pg~~~~~~~----~--~~~~~~~~~~~~~gy~i~~i~~~-~~~~~~~~~ 254 (274)
T 3d03_A 204 ---YRQALISTLPGTVHQVPY----C--HADTDPYYDLSPASCLMHRQVGE-QWVSYQHSL 254 (274)
T ss_dssp ---ETTEEEEECCCSSCBCCC----C--SSCCSCEEBCCCCEEEEEEEETT-EEEEEEEEC
T ss_pred ---ECCEEEEEcCCcceeecc----C--CCccccccccCCCceEEEEEeCC-cEEEEEEec
Confidence 134445565544322111 0 1111 223344589999999654 588888764
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.89 E-value=8.8e-23 Score=192.83 Aligned_cols=228 Identities=15% Similarity=0.131 Sum_probs=144.2
Q ss_pred CCCcEEEEEecCCCCCCc----------------hhhHHH----hhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS----------------NRTLTH----YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGR 155 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~----------------~~~l~~----~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~ 155 (407)
...+||++++|+|..... ...+++ +.+ .+||+||++||+++.... .....++.+..
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~d~vi~~GD~~~~~~~--~~~~~~~~~~~ 78 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNR--RRDASDRALDT 78 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBCTHHH--HTTCHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCCccCCCCC--cchHHHHHHHH
Confidence 357999999999987521 022322 333 389999999999964320 00112344433
Q ss_pred HHhhhh-ccCCeEEccCCCccccCCCCCCcccccccccccc-------------cCCCCCCCCCCeEEEEec-CcEEEEE
Q 040421 156 FIERNA-AYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFH-------------LPYRAPYSTAPFWYSIRR-ASAHIIV 220 (407)
Q Consensus 156 ~~~~~~-~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~-------------~P~~~~~~~~~~~ysf~~-g~v~fi~ 220 (407)
+++.+. ..+|+++++||||....+. ..+...+. +|. .+..||+|+. ++++||+
T Consensus 79 ~~~~l~~~~~p~~~v~GNHD~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ 146 (322)
T 2nxf_A 79 VMAELDACSVDVHHVWGNHEFYNFSR-------PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVL 146 (322)
T ss_dssp HHHHHHTTCSEEEECCCHHHHHHCCH-------HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEE
T ss_pred HHHHHHhcCCcEEEecCCCCcccCCH-------HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEE
Confidence 443333 2579999999999831100 01111111 221 2346899998 8999999
Q ss_pred Eecccc----------------------------------------------CCCChHHHHHHHHhccccCCCCCCeEEE
Q 040421 221 MSCYSA----------------------------------------------FGKYTPQYKWLEKEFPKVNRSETPWLIV 254 (407)
Q Consensus 221 Lds~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 254 (407)
||+... .....+|++||+++|+.+.+ +..++||
T Consensus 147 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv 225 (322)
T 2nxf_A 147 LDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLI 225 (322)
T ss_dssp CCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEE
T ss_pred EcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 998541 01237899999999987532 1347899
Q ss_pred EeeccccccCCCCCCCChhHHHHHHHHHHhC-CCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCC
Q 040421 255 LMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDG 333 (407)
Q Consensus 255 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~g 333 (407)
++|+|++....... .....++.+.++++++ +|+++|+||+|.+++... .+|+.|+++|+.
T Consensus 226 ~~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~------------------~~g~~~i~~~~~ 286 (322)
T 2nxf_A 226 FSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD------------------SSGAQHITLEGV 286 (322)
T ss_dssp EESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC------------------TTSCEEEECCCG
T ss_pred EEccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec------------------cCCceEEEecch
Confidence 99999987553210 0111356788999999 799999999999987641 245677776654
Q ss_pred CCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEE
Q 040421 334 GNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHR 377 (407)
Q Consensus 334 G~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~ 377 (407)
-. . + ....||..+++.+ ..+.++.+.
T Consensus 287 ~~--~---------~------~~~~~y~~v~~~~-~~~~~~~~~ 312 (322)
T 2nxf_A 287 IE--T---------P------PHSHAFATAYLYE-DRMVMKGRG 312 (322)
T ss_dssp GG--C---------C------TTSCEEEEEEECS-SEEEEEEEE
T ss_pred hh--C---------C------CCCCcEEEEEEEC-CeEEEEecc
Confidence 11 0 0 1236899999964 457665443
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.80 E-value=1.8e-18 Score=171.04 Aligned_cols=199 Identities=12% Similarity=0.086 Sum_probs=121.9
Q ss_pred CCCcEEEEEecCCCCCCc-----------------------hhhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchh
Q 040421 96 DVPYTFGLIGDLGQTYYS-----------------------NRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNR 149 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-----------------------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~ 149 (407)
...+||++++|+|..... ...+++++ +. .+||+||++||+++... ...
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~d~vi~~GDl~~~~~-----~~~ 110 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES-KKTDVLIISGDLTNNGE-----KTS 110 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHH-HTCSEEEEESCCBSSCC-----HHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHH-cCCCEEEECCCCCCCCC-----HHH
Confidence 468999999999985321 22333322 12 37999999999996421 234
Q ss_pred hhHHHHHHhhhhc-cCCeEEccCCCccccCCCCC--Cc-------ccccccccccccCCCC----CCCCCCeEEEEecCc
Q 040421 150 WDTWGRFIERNAA-YQPWIWTVGNHEIDFAPQLG--EA-------IPFKPFANRFHLPYRA----PYSTAPFWYSIRRAS 215 (407)
Q Consensus 150 ~~~~~~~~~~~~~-~~P~~~~~GNHD~~~~~~~~--~~-------~~~~~~~~~f~~P~~~----~~~~~~~~ysf~~g~ 215 (407)
++.+.+.++.+.. .+|+++++||||+....... .. .....|...|...... .......|+.+..++
T Consensus 111 ~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 190 (443)
T 2xmo_A 111 HEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSK 190 (443)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSS
T ss_pred HHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCC
Confidence 5556666666533 68999999999985311000 00 0001111222110000 000122344455789
Q ss_pred EEEEEEecccc------------CCCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCC-CCChhHHHHHHHHH
Q 040421 216 AHIIVMSCYSA------------FGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY-MEGEPMRVLYEPWF 282 (407)
Q Consensus 216 v~fi~Lds~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~ 282 (407)
++||+||+... .....+|++||++.|+.+.. ....+||++|+|++....... ......++.+.+++
T Consensus 191 ~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll 269 (443)
T 2xmo_A 191 VWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDAL 269 (443)
T ss_dssp EEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHH
T ss_pred EEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccccccHHHHHHHH
Confidence 99999999632 12357999999999987532 234689999999976532110 00112356788999
Q ss_pred HhCCCcEEEeccccccccc
Q 040421 283 VEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 283 ~~~~vdlvl~GH~H~y~r~ 301 (407)
++++|+++|+||+|..+..
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999987654
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.59 E-value=1.8e-15 Score=135.39 Aligned_cols=171 Identities=8% Similarity=-0.024 Sum_probs=96.1
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcccc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDF 177 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 177 (407)
.+||+++||+|.+....+.+.+..+. .++|+||++||++.... ....+..+++.++.+ ..|+++++||||...
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~-~~~D~vi~~GDl~~~~~----~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPD-TGADAIALIGNLMPKAA----KSRDYAAFFRILSEA--HLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHH-HTCSEEEEESCSSCTTC----CHHHHHHHHHHHGGG--CSCEEEECCTTSCSH
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhh-cCCCEEEECCCCCCCCC----CHHHHHHHHHHHHhc--CCcEEEECCCCCchh
Confidence 58999999999864322222222222 27999999999995421 122333344444332 579999999999842
Q ss_pred CCCCCCccccccccccc----ccCCCCCCCCCCeEEEEecC-cEEEEEEeccc--cCCCCh--------HHHHHHHHhcc
Q 040421 178 APQLGEAIPFKPFANRF----HLPYRAPYSTAPFWYSIRRA-SAHIIVMSCYS--AFGKYT--------PQYKWLEKEFP 242 (407)
Q Consensus 178 ~~~~~~~~~~~~~~~~f----~~P~~~~~~~~~~~ysf~~g-~v~fi~Lds~~--~~~~~~--------~Q~~WL~~~L~ 242 (407)
. ......+ ..|... ...+. .+.++ ++.|+.+++.. .+.... .+.+|+++.|+
T Consensus 78 ~---------~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 144 (228)
T 1uf3_A 78 W---------EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALW 144 (228)
T ss_dssp H---------HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGG
T ss_pred H---------HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHH
Confidence 0 0011110 011100 00011 23445 88999887532 111111 22345556665
Q ss_pred ccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccc
Q 040421 243 KVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVH 296 (407)
Q Consensus 243 ~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H 296 (407)
+.. ..+.|+++|+|++...... .+ ...+..++++++++++++||+|
T Consensus 145 ~~~---~~~~il~~H~p~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 145 ELK---DYPKIFLFHTMPYHKGLNE--QG---SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp GSC---SCCEEEEESSCBCBTTTBT--TS---BHHHHHHHHHHCCSEEEECCSS
T ss_pred hCC---CCCeEEEEccCcccCCccc--cC---HHHHHHHHHHhCCCEEEEcccc
Confidence 532 2368999999987642111 11 1356677888899999999999
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.55 E-value=2.7e-14 Score=130.63 Aligned_cols=184 Identities=10% Similarity=0.043 Sum_probs=97.2
Q ss_pred CcEEEEEecCCCCCCchhh-HHHhhhCCCCCceEEEcCCccccCCCCC-----------CCchh--------hhHHHHHH
Q 040421 98 PYTFGLIGDLGQTYYSNRT-LTHYELNPIKGQTVLFVGDLSYADDYPF-----------HDNNR--------WDTWGRFI 157 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~y~~~~~~-----------~~~~~--------~~~~~~~~ 157 (407)
.+||+++||+|.+...... ++.+.+. ++|+||++||++....... ..... .+.+.+.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~--~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l 82 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEK--QPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF 82 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHH--CCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhc--CCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHH
Confidence 5899999999987544333 3333333 8999999999985321000 00000 02233444
Q ss_pred hhhhc-cCCeEEccCCCccccCCCCCCcccccccccccc-cCCCCCCCCCCeEEEEecCcEEEEEEeccccC-CCChHHH
Q 040421 158 ERNAA-YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFH-LPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF-GKYTPQY 234 (407)
Q Consensus 158 ~~~~~-~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~-~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~-~~~~~Q~ 234 (407)
+.+.. ..|+++++||||..... .+........ .|.. ....+ ...+.+++++|++++..... ....+++
T Consensus 83 ~~l~~~~~pv~~v~GNHD~~~~~------~~~~~~~~~~~~~~~--~~l~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 153 (260)
T 2yvt_A 83 REIGELGVKTFVVPGKNDAPLKI------FLRAAYEAETAYPNI--RVLHE-GFAGWRGEFEVIGFGGLLTEHEFEEDFV 153 (260)
T ss_dssp HHHHTTCSEEEEECCTTSCCHHH------HHHHHHHTTTTCTTE--EECSS-EEEEETTTEEEEEECSEEESSCCBSSSS
T ss_pred HHHHhcCCcEEEEcCCCCchhhh------hHHHHhhhccCCcce--EEecC-cceEEECCEEEEecCCCcCCCCcCHHHH
Confidence 44433 57999999999984200 0000000000 0000 00011 12367889999999853211 0111222
Q ss_pred ---------HHHHHhccccCCCCCCeEEEEeeccccccCCCCC--CCChhHHHHHHHHHHhCCCcEEEecccc
Q 040421 235 ---------KWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY--MEGEPMRVLYEPWFVEYKVDVVFAAHVH 296 (407)
Q Consensus 235 ---------~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~--~~~~~~~~~l~~l~~~~~vdlvl~GH~H 296 (407)
+|| +.|++. .....|+++|+|++....... .........+.+++++++++++++||+|
T Consensus 154 ~~~~~~~~~~~l-~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 154 LKYPRWYVEYIL-KFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp CEEEHHHHHHHG-GGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred hhcchhhHHHHH-HHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 455 444442 123569999999875311100 0000112356678888999999999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.55 E-value=1.1e-14 Score=138.49 Aligned_cols=190 Identities=13% Similarity=0.100 Sum_probs=98.2
Q ss_pred CCCcEEEEEecCCCC----CC--c-------hhhHHHhh---hCCCCCceEEEcCC-ccccCCCCCCCchhhhHHHHHHh
Q 040421 96 DVPYTFGLIGDLGQT----YY--S-------NRTLTHYE---LNPIKGQTVLFVGD-LSYADDYPFHDNNRWDTWGRFIE 158 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~----~~--~-------~~~l~~~~---~~~~~~d~vl~~GD-~~y~~~~~~~~~~~~~~~~~~~~ 158 (407)
...+||+.++|+|.+ .. . ...+++++ .. .++|+||++|| ++. .+.+ .......+.++++
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~-~~~D~vliaGD~l~d-~~~~--~~~~~~~~~~~l~ 91 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEK-REVDLILLTGDLLHS-RNNP--SVVALHDLLDYLK 91 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHH-HTCSEEEEESCSBSC-SSCC--CHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHH-hCCCEEEECCccccC-CCCC--CHHHHHHHHHHHH
Confidence 368999999999976 21 1 12333332 22 38999999999 553 3321 1222344566666
Q ss_pred hhhccCCeEEccCCCccccCCCCCCcccccccccc----cccCCCCCCCCCCeEEEEecCcEEEEEEeccccC-------
Q 040421 159 RNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANR----FHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF------- 227 (407)
Q Consensus 159 ~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~----f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~------- 227 (407)
.+...+|+++++||||... .. .+..+... +.+-.+.. ....+.+..+++.|++++.....
T Consensus 92 ~L~~~~pv~~i~GNHD~~~---~~---~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~glp~~~~~~~~~~~~ 162 (336)
T 2q8u_A 92 RMMRTAPVVVLPGNHDWKG---LK---LFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPFPYPDESEALRKNE 162 (336)
T ss_dssp HHHHHSCEEECCC---------CH---HHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEECCC-------CCS
T ss_pred HHHhcCCEEEECCCCCccc---cc---cHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEECCCCCHHHHHHHhh
Confidence 6643389999999999842 11 01111110 11111100 00011222356888888753211
Q ss_pred CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChh-H-HHHHHHHHHhCCCcEEEeccccccccc
Q 040421 228 GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEP-M-RVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 228 ~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~-~-~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
....+|++|+.+.|...-.....+.|+++|.|+...... ..+. + ...+...+.+.++|++++||.|..+..
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~---~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~ 235 (336)
T 2q8u_A 163 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY---AGIEQGREIIINRALIPSVVDYAALGHIHSFREI 235 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------CCCEECGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC---CCccchhhcccCHHHccccCCEEEEccccCceEe
Confidence 112467889888876420012358999999998753211 0000 0 001212234568999999999988765
No 13
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.46 E-value=1.9e-12 Score=112.83 Aligned_cols=181 Identities=13% Similarity=0.127 Sum_probs=109.0
Q ss_pred CCCcEEEEEecCCCCCC---chhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCC
Q 040421 96 DVPYTFGLIGDLGQTYY---SNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGN 172 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GN 172 (407)
...+||+++||+|.... ....+.++.+. .++|+||++||++. ....+.++.+ ..|+++++||
T Consensus 8 ~~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~-~~~d~ii~~GDl~~------------~~~~~~l~~~--~~~~~~v~GN 72 (192)
T 1z2w_A 8 RDRMLVLVLGDLHIPHRCNSLPAKFKKLLVP-GKIQHILCTGNLCT------------KESYDYLKTL--AGDVHIVRGD 72 (192)
T ss_dssp ---CEEEEECCCCBTTTCSSCCHHHHTTCCT-TSCSEEEECSCCBS------------HHHHHHHHHH--CSEEEECCCT
T ss_pred ccceEEEEEecCCCCccchhHHHHHHHHhcc-CCCCEEEEcCCCCC------------HHHHHHHHhc--CCCEEEEcCC
Confidence 34589999999997532 22334444433 37999999999982 1223334433 2589999999
Q ss_pred CccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeE
Q 040421 173 HEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWL 252 (407)
Q Consensus 173 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 252 (407)
||... .+|. ...++. ..++
T Consensus 73 hD~~~-----------------~lp~---------~~~~~~-----------------------------------~~~~ 91 (192)
T 1z2w_A 73 FDENL-----------------NYPE---------QKVVTV-----------------------------------GQFK 91 (192)
T ss_dssp TCCCT-----------------TSCS---------EEEEEE-----------------------------------TTEE
T ss_pred cCccc-----------------cCCc---------ceEEEE-----------------------------------CCEE
Confidence 99731 1121 111110 1267
Q ss_pred EEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCC
Q 040421 253 IVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGD 332 (407)
Q Consensus 253 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~ 332 (407)
|+++|.+++.... + .+.+..++++.+++++++||+|...... .+++.++-.|+
T Consensus 92 i~l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGS 144 (192)
T 1z2w_A 92 IGLIHGHQVIPWG-----D---MASLALLQRQFDVDILISGHTHKFEAFE-------------------HENKFYINPGS 144 (192)
T ss_dssp EEEECSCCCCBTT-----C---HHHHHHHHHHHSSSEEECCSSCCCEEEE-------------------ETTEEEEECCC
T ss_pred EEEECCCcCCCCC-----C---HHHHHHHHHhcCCCEEEECCcCcCccEe-------------------ECCEEEEECCc
Confidence 8888955443211 1 2345667777899999999999754321 14566777777
Q ss_pred CCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEe
Q 040421 333 GGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHN 393 (407)
Q Consensus 333 gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~ 393 (407)
.+.+.. ... .....+|+.+++.+ ..+.++++.-.++++ ...++++.|
T Consensus 145 ~~~~~~---~~~---------~~~~~~y~il~~~~-~~~~~~~~~~~~~~~-~v~~~~~~~ 191 (192)
T 1z2w_A 145 ATGAYN---ALE---------TNIIPSFVLMDIQA-STVVTYVYQLIGDDV-KVERIEYKK 191 (192)
T ss_dssp TTCCCC---SSC---------SCCCCEEEEEEEET-TEEEEEEEEEETTEE-EEEEEEEEC
T ss_pred ccccCC---CCC---------cCCCCcEEEEEEEC-CEEEEEEEEccCCEE-EEEEEEEcc
Confidence 654321 000 01246899999964 458888876555554 467777765
No 14
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.43 E-value=6.3e-12 Score=111.61 Aligned_cols=188 Identities=14% Similarity=0.128 Sum_probs=109.8
Q ss_pred CcEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 98 PYTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
.+||+++||+|.+... ...+.++.+. .++|+|+++||++. .+..+.++.+ ..|+++++||||
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~-~~~D~vi~~GDl~~------------~~~l~~l~~~--~~~v~~V~GNHD 89 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLAT-DKINYVLCTGNVCS------------QEYVEMLKNI--TKNVYIVSGDLD 89 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHC-TTCCEEEECSCCCC------------HHHHHHHHHH--CSCEEECCCTTC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhc-CCCCEEEECCCCCC------------HHHHHHHHHc--CCCEEEecCCCc
Confidence 5899999999986432 2445555444 38999999999982 1233444443 358999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEE
Q 040421 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIV 254 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 254 (407)
.... .....|. ..+.. ...++. ...+|+
T Consensus 90 ~~~~----------~~~~~~~-----------------------------~~lp~--------~~~~~~-----~~~~i~ 117 (215)
T 2a22_A 90 SAIF----------NPDPESN-----------------------------GVFPE--------YVVVQI-----GEFKIG 117 (215)
T ss_dssp CSCC----------BCCGGGT-----------------------------BCCCS--------EEEEEE-----TTEEEE
T ss_pred Cccc----------ccChhhH-----------------------------hhCCc--------eEEEec-----CCeEEE
Confidence 8421 0000000 00000 000111 126788
Q ss_pred EeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCC
Q 040421 255 LMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGG 334 (407)
Q Consensus 255 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG 334 (407)
++|.+++.... + .+.+..++++.+++++++||+|...... .+++.++-.|+.+
T Consensus 118 l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vl~GHtH~~~~~~-------------------~~~~~~inpGS~~ 170 (215)
T 2a22_A 118 LMHGNQVLPWD-----D---PGSLEQWQRRLDCDILVTGHTHKLRVFE-------------------KNGKLFLNPGTAT 170 (215)
T ss_dssp EECSTTSSSTT-----C---HHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------ETTEEEEECCCSS
T ss_pred EEcCCccCCCC-----C---HHHHHHHHhhcCCCEEEECCcCCCccEe-------------------eCCEEEEECCccc
Confidence 99965543211 1 2355667777899999999999754321 1455677777765
Q ss_pred CCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEe
Q 040421 335 NQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHN 393 (407)
Q Consensus 335 ~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~ 393 (407)
.+.. ... .....+|+.+++.+ ..+.++++.-.+|++ ...+..+.|
T Consensus 171 ~~~~---~~~---------~~~~~~y~il~i~~-~~i~~~~~~~~~~~~-~v~~~~~~~ 215 (215)
T 2a22_A 171 GAFS---ALT---------PDAPPSFMLMALQG-NKVVLYVYDLRDGKT-NVAMSEFSK 215 (215)
T ss_dssp CCCC---TTS---------TTCCCEEEEEEEET-TEEEEEEEEEETTEE-EEEEEEEEC
T ss_pred ccCC---CCC---------CCCCCcEEEEEEeC-CcEEEEEEEecCCeE-EEEEEEeeC
Confidence 4321 000 01236899999964 458888876555654 356666654
No 15
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.38 E-value=7.3e-12 Score=121.23 Aligned_cols=177 Identities=16% Similarity=0.048 Sum_probs=94.6
Q ss_pred CCCcEEEEEecCCCCCCc----------hhhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc
Q 040421 96 DVPYTFGLIGDLGQTYYS----------NRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA 162 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~----------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 162 (407)
...+||++++|+|.+... ...+.+++ .. .++|+||++||++.... .....+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~-~~~D~VliaGDl~d~~~---p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILE-IKPDVVLHSGDLFNDLR---PPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSCSBSSSS---CCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHH-cCCCEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHh
Confidence 468999999999987431 01233322 23 38999999999985432 112344556666766654
Q ss_pred -cCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChH---HHHHHH
Q 040421 163 -YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTP---QYKWLE 238 (407)
Q Consensus 163 -~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~---Q~~WL~ 238 (407)
.+|+++++||||...... .......+...+..-. ...++..+-+++.+++++..... .... +++|+.
T Consensus 94 ~~~pv~~v~GNHD~~~~~~--~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~-~~~~~~~~l~~l~ 164 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLG--EESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKS-KREEMLDKLKNFE 164 (386)
T ss_dssp TTCEEEECCCGGGSCSSTT--SCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCST-THHHHHHHHHHHH
T ss_pred cCCcEEEEcCCCCCCcccc--ccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHH-HHHHHHHHHHHhh
Confidence 489999999999842111 0000000111011100 01122222246888888864321 1122 333343
Q ss_pred HhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 239 KEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 239 ~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
..+. ...+.|+++|+|+.......+. . .+. .+. ++|++++||+|..+
T Consensus 165 ~~~~-----~~~~~Ill~H~~~~~~~~~~~~--~----~~~-~l~--~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 165 SEAK-----NYKKKILMLHQGINPYIPLDYE--L----EHF-DLP--KFSYYALGHIHKRI 211 (386)
T ss_dssp HHHH-----TCSSEEEEECCCCTTTSSSSCS--S----CGG-GSC--CCSEEEECSCCSCE
T ss_pred hhcc-----cCCCEEEEECcCccccCCCCcc--c----CHH-Hhh--hCCeEEccCCCCCc
Confidence 3332 2246899999997542111110 0 011 122 39999999999874
No 16
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.35 E-value=2.7e-11 Score=104.03 Aligned_cols=162 Identities=12% Similarity=0.034 Sum_probs=100.5
Q ss_pred CCcEEEEEecCCCCCCchhhHHHhhhCC-CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 97 VPYTFGLIGDLGQTYYSNRTLTHYELNP-IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
..+|++++||+|.. ...++++.+.. .++|+|+++||+.+. .++.+.. |+++++||||.
T Consensus 5 ~~m~i~~isD~H~~---~~~~~~~~~~~~~~~d~i~~~GD~~~~----------------~l~~l~~--~~~~v~GNhD~ 63 (176)
T 3ck2_A 5 AKQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELR----------------PDSPLWE--GIRVVKGNMDF 63 (176)
T ss_dssp CCEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSC----------------TTCGGGT--TEEECCCTTCC
T ss_pred cCcEEEEEecCCCC---HHHHHHHHHHhhcCCCEEEECCCCchH----------------HHHhhhC--CeEEecCcccc
Confidence 35899999999954 23333333211 178999999997421 1122222 89999999997
Q ss_pred ccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEE
Q 040421 176 DFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVL 255 (407)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 255 (407)
.. .+|. .. .+.- ...+|++
T Consensus 64 ~~-----------------~~p~---------~~------------------------------~~~~-----~~~~i~~ 82 (176)
T 3ck2_A 64 YA-----------------GYPE---------RL------------------------------VTEL-----GSTKIIQ 82 (176)
T ss_dssp ST-----------------TCCS---------EE------------------------------EEEE-----TTEEEEE
T ss_pred hh-----------------cCCc---------EE------------------------------EEEE-----CCeEEEE
Confidence 31 0121 00 0110 1257889
Q ss_pred eeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCC
Q 040421 256 MHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGN 335 (407)
Q Consensus 256 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~ 335 (407)
+|.|++.... .. +.+..++++++++++++||+|...... .+++.++-.|+.|.
T Consensus 83 ~Hg~~~~~~~----~~----~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 83 THGHLFDINF----NF----QKLDYWAQEEEAAICLYGHLHVPSAWL-------------------EGKILFLNPGSISQ 135 (176)
T ss_dssp ECSGGGTTTT----CS----HHHHHHHHHTTCSEEECCSSCCEEEEE-------------------ETTEEEEEECCSSS
T ss_pred ECCCccCCCC----CH----HHHHHHHHhcCCCEEEECCcCCCCcEE-------------------ECCEEEEECCCCCc
Confidence 9998865321 11 345677788999999999999764332 14566777777664
Q ss_pred CCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCcee
Q 040421 336 QEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAV 384 (407)
Q Consensus 336 ~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~ 384 (407)
+.. .. ...+|+.+++. +..+.+++++ .+|+++
T Consensus 136 ~~~-------~~--------~~~~y~il~~~-~~~~~v~~~~-~~~~~~ 167 (176)
T 3ck2_A 136 PRG-------TI--------RECLYARVEID-DSYFKVDFLT-RDHEVY 167 (176)
T ss_dssp CCT-------TC--------CSCCEEEEEEC-SSEEEEEEEC-TTSCBC
T ss_pred CCC-------CC--------CCCeEEEEEEc-CCEEEEEEEE-ECCEEc
Confidence 311 01 12689999995 4568888876 568765
No 17
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.34 E-value=5.9e-12 Score=116.00 Aligned_cols=204 Identities=14% Similarity=0.088 Sum_probs=106.3
Q ss_pred CCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 95 PDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 95 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
....+||+++||+|..... + +. .++|+||++||++.... ......+.+.++.+. ..|+++++||||
T Consensus 56 ~~~~mri~~iSD~H~~~~~---l----~i-~~~D~vi~aGDl~~~g~-----~~e~~~~~~~L~~l~-~~~v~~V~GNHD 121 (296)
T 3rl5_A 56 PAGHTRFVCISDTRSRTDG---I----QM-PYGDILLHTGDFTELGL-----PSEVKKFNDWLGNLP-YEYKIVIAGNHE 121 (296)
T ss_dssp CTTEEEEEEEBCCTTCCTT---C----CC-CSCSEEEECSCCSSSCC-----HHHHHHHHHHHHTSC-CSEEEECCCTTC
T ss_pred CCCCeEEEEEeeCCCCcch---h----cc-CCCCEEEECCcccCCCC-----HHHHHHHHHHHHhCC-CCeEEEEcCCcc
Confidence 3467999999999987532 1 22 37999999999996421 233444555555542 246899999999
Q ss_pred cccCCCCCCc---ccccccc----------ccc-ccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCC---hHHHHHH
Q 040421 175 IDFAPQLGEA---IPFKPFA----------NRF-HLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKY---TPQYKWL 237 (407)
Q Consensus 175 ~~~~~~~~~~---~~~~~~~----------~~f-~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~---~~Q~~WL 237 (407)
+..+...-+. ..+..+. ..+ .++.+ .-...+. +..+++++|++......+... .++.+++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~L~~~--~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~ 198 (296)
T 3rl5_A 122 LTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTN-SIYLQDS--EVTVKGFRIYGAPWTPWFNGWGFNLPRGQSL 198 (296)
T ss_dssp GGGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTT-SEECSSE--EEEETTEEEEEECCBCC--CCTTBCCTTHHH
T ss_pred cccchhhhhhhhcccccccccccccccchhhhHhhhcCC-eEEecCC--cEEECCEEEEEecCCCCCCCcCCCcchHHHH
Confidence 9533110000 0000000 000 01110 0001122 344578999885543222211 1122233
Q ss_pred HHhccccCCCCCCeEEEEeeccccccCCCCCCCC-hhHHHHHHHHH-HhCCCcEEEeccccccccccccccceeeccCCc
Q 040421 238 EKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEG-EPMRVLYEPWF-VEYKVDVVFAAHVHAYERSERMSNIAYNVTNAL 315 (407)
Q Consensus 238 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~-~~~~~~l~~l~-~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~ 315 (407)
.+.+... .....|+++|.|++.......... ..-.+.+..++ ++++.+++++||+|.......
T Consensus 199 ~~~~~~i---p~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~------------ 263 (296)
T 3rl5_A 199 LDKWNLI---PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT------------ 263 (296)
T ss_dssp HHHHTTS---CTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE------------
T ss_pred HHHHhhC---CCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEE------------
Confidence 3333332 123468999999987532110000 00113455555 689999999999997432211
Q ss_pred ccccCCCCCceEEEeCCCCCC
Q 040421 316 CSPVSDQSAPVYITIGDGGNQ 336 (407)
Q Consensus 316 ~~~~~~~~g~~~iv~G~gG~~ 336 (407)
.+++++|-.|+-|..
T Consensus 264 ------~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 264 ------DGYTTYINASTCTVS 278 (296)
T ss_dssp ------CSSCEEEECBCSCTT
T ss_pred ------ECCEEEEECCcCCcC
Confidence 245667767766653
No 18
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.34 E-value=4.4e-12 Score=115.39 Aligned_cols=190 Identities=8% Similarity=-0.086 Sum_probs=99.0
Q ss_pred cEEEEEecCCCCCCch-hhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 99 YTFGLIGDLGQTYYSN-RTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~-~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
+||+++||+|...... ..++.+. ....++|+||++||++.... .. .+..+.+..+....|+++++||||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~----~~---~~~~~~l~~l~~~~~~~~v~GNhD 74 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFP----YP---KEVIEVIKDLTKKENVKIIRGKYD 74 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS----CH---HHHHHHHHHHHHHSCEEEECCHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCC----CH---HHHHHHHHhhHhhcCeeEEecchH
Confidence 6899999999753322 2233333 32116899999999995321 11 233444444443368999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEecc--ccCCCChHHHHHHHHhccccCCCCCCeE
Q 040421 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCY--SAFGKYTPQYKWLEKEFPKVNRSETPWL 252 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 252 (407)
.......... ..+. +. . .++..... ..+. ..-....+|++||++........-....
T Consensus 75 ~~~~~~~~~~---~~~~-----~~--------~--~~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~ 133 (252)
T 1nnw_A 75 QIIAMSDPHA---TDPG-----YI--------D--KLELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNE 133 (252)
T ss_dssp HHHHHSCTTC---SSSG-----GG--------G--GSSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEE
T ss_pred HHhhcccccc---CCcc-----cc--------c--chhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcE
Confidence 7421000000 0000 00 0 00000000 0000 0001235788999874432211112247
Q ss_pred EEEeeccccccCCCCCCCChhHHHHHHHHHHhC-CCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeC
Q 040421 253 IVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIG 331 (407)
Q Consensus 253 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G 331 (407)
|+++|++++...... .......+.+..++.++ +++++++||+|...... .+++.+|..|
T Consensus 134 i~~~H~~p~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~-------------------~~~~~~in~G 193 (252)
T 1nnw_A 134 VFGVYGSPINPFDGE-VLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM-------------------TRYGRVVCPG 193 (252)
T ss_dssp EEEESSCSSCTTTCC-CCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE-------------------ETTEEEEEEC
T ss_pred EEEEcCCCCCCcccc-cCCCCCHHHHHHHHhcCCCCCEEEECCccccceEe-------------------cCCeEEEECC
Confidence 888898874322111 11111124667788888 99999999999754332 1456778888
Q ss_pred CCCCC
Q 040421 332 DGGNQ 336 (407)
Q Consensus 332 ~gG~~ 336 (407)
+.|.+
T Consensus 194 s~~~~ 198 (252)
T 1nnw_A 194 SVGFP 198 (252)
T ss_dssp CSSSC
T ss_pred CccCC
Confidence 87653
No 19
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.32 E-value=9e-12 Score=120.21 Aligned_cols=190 Identities=13% Similarity=0.101 Sum_probs=100.6
Q ss_pred cEEEEEecCCCCCC----c---------hhhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc
Q 040421 99 YTFGLIGDLGQTYY----S---------NRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA 162 (407)
Q Consensus 99 ~~f~~~gD~~~~~~----~---------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 162 (407)
+||++++|+|.+.. . ...++++. .. .+||+||++||++++... .....+..+.+.++.+..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~-~~~D~vliaGDl~hd~~~--~~~~~~~~~~~~l~~l~~ 77 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEK-REVDLILLTGDLLHSRNN--PSVVALHDLLDYLKRMMR 77 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHH-HTCSEEEECSCCBSCSSS--CCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHh-cCCCEEEECCCccccCCC--CCHHHHHHHHHHHHHHHh
Confidence 68999999998754 1 12333332 22 389999999999943221 122344556666666654
Q ss_pred cCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEe--cC-cEEEEEEeccccCC----CChHHHH
Q 040421 163 YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIR--RA-SAHIIVMSCYSAFG----KYTPQYK 235 (407)
Q Consensus 163 ~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~--~g-~v~fi~Lds~~~~~----~~~~Q~~ 235 (407)
.+|+++++||||.... ..+..... .++.+..-.....-+.+. .| .+.+..+.-..... ....+.+
T Consensus 78 ~~~v~~i~GNHD~~~~------~~~~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~ 149 (379)
T 3tho_B 78 TAPVVVLPGNQDWKGL------KLFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 149 (379)
T ss_dssp HSCEEECCCTTSCTTH------HHHHHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHH
T ss_pred CCCEEEEcCCCccccC------cccccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHH
Confidence 4899999999996310 00000000 011110000000112232 23 47777775422110 1246788
Q ss_pred HHHHhcccc---CCCCCCeEEEEeeccccccCCCCCCCCh-hHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 236 WLEKEFPKV---NRSETPWLIVLMHCPLYNSYVHHYMEGE-PMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 236 WL~~~L~~~---~~~~~~~~iv~~H~P~~~~~~~~~~~~~-~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
|+.+.|+.. ......+.|+++|.++...... ...+ .+...+...+...++|+++.||.|..+..
T Consensus 150 ~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~--~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 150 FLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY--AGIEQGREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEeccccCCccC--CCCccccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 998888721 1123457899999997543220 0000 00012222233468999999999998644
No 20
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=99.28 E-value=4.4e-11 Score=109.83 Aligned_cols=220 Identities=10% Similarity=0.053 Sum_probs=116.9
Q ss_pred CCCcEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 96 DVPYTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
....|++++||+|....... .++.+.+. ++|.|+++||++.... ...+..+.++.+ .|+++++||||
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~--~~D~ii~~GDlv~~g~-------~~~~~~~~l~~~---~~~~~v~GNhD 76 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQL--GVDEYWLLGDILMPGT-------GRRRILDLLDQL---PITARVLGNWE 76 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHT--TCCEEEECSCCSSSSS-------CSHHHHHHHHTS---CEEEECCCHHH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCC-------CHHHHHHHHHcc---CCEEEEcCChH
Confidence 35789999999997543222 23333333 7999999999995421 113334444433 47899999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEE
Q 040421 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIV 254 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 254 (407)
..... .....+.++.. ...+. .. .+. ...-....++++||++.-......-....|+
T Consensus 77 ~~~~~---------~~~~~~~~~~~-----~~~~~----~~----~~~-~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~ 133 (270)
T 3qfm_A 77 DSLWH---------GVRKELDSTRP-----SQRYL----LR----QCQ-YVLEEISLEEIEVLHNQPLQIHRQFGDLTVG 133 (270)
T ss_dssp HHHHH---------HHTTCSCTTSH-----HHHHH----HH----HHH-HHHTTSCHHHHHHHHSCCSEEEEEETTEEEE
T ss_pred HHHHH---------hhccccCCCcH-----HHHHH----HH----HHH-HHHHHcCHHHHHHHHhCCCceEEEECCcEEE
Confidence 84210 00000000000 00000 00 000 0011245788999986543321111225677
Q ss_pred EeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCC
Q 040421 255 LMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGG 334 (407)
Q Consensus 255 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG 334 (407)
++|..+..... .......-.+.+..++.+.++|++|+||+|...... ..++..+|-.|+.|
T Consensus 134 lvHg~p~~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~------------------~~~~~~~iNpGSvg 194 (270)
T 3qfm_A 134 ISHHLPDKNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY------------------GTGGQLIVNPGSIG 194 (270)
T ss_dssp EESSBTTBSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE------------------CTTSCEEEEECCSS
T ss_pred EEECCCCCCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHhee------------------ccCCEEEEECCCcc
Confidence 88876543211 111111123466777888899999999999533221 02466788899988
Q ss_pred CCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEc
Q 040421 335 NQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRN 378 (407)
Q Consensus 335 ~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 378 (407)
.+... .+.++ ......|++|++.+++...++|.+.
T Consensus 195 ~pr~~-----~~~~~----~~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 195 QPFFL-----DAQLR----KDLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp SCCCS-----STTGG----GCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCC-----Ccccc----CCCCCEEEEEEecCCCceEEEEEEe
Confidence 75321 01000 0123679999996555456777653
No 21
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.15 E-value=1.6e-10 Score=104.69 Aligned_cols=153 Identities=15% Similarity=0.178 Sum_probs=85.2
Q ss_pred CCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 97 VPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
..+|++++||+|... ..+.++.+...++|.++++||++.... .-.+..+.+..+ .++++++||||..
T Consensus 2 ~~mri~~isDiHg~~---~~l~~~l~~~~~~d~ii~~GDl~~~g~-------~~~~~~~~l~~~---~~~~~v~GNhD~~ 68 (246)
T 3rqz_A 2 NAMRILIISDVHANL---VALEAVLSDAGRVDDIWSLGDIVGYGP-------RPRECVELVRVL---APNISVIGNHDWA 68 (246)
T ss_dssp CCCCEEEECCCTTCH---HHHHHHHHHHCSCSEEEECSCCSSSSS-------CHHHHHHHHHHH---CSSEECCCHHHHH
T ss_pred CCcEEEEEeecCCCH---HHHHHHHHhccCCCEEEECCCcCCCCC-------CHHHHHHHHHhc---CCCEEEeCchHHH
Confidence 368999999999543 334433332127899999999995321 112334444433 2368999999985
Q ss_pred cCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEe
Q 040421 177 FAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLM 256 (407)
Q Consensus 177 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 256 (407)
...... . ..+. + ... ..+.. ..-....++++||++....... . .++++
T Consensus 69 ~~~~~~-------~-~~~~-~---------------~~~---~~~~~-~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~ 116 (246)
T 3rqz_A 69 CIGRLS-------L-DEFN-P---------------VAR---FASYW-TTMQLQAEHLQYLESLPNRMID-G---DWTVV 116 (246)
T ss_dssp HTCCCC-------C-C--C-G---------------GGG---CHHHH-HHHHCCHHHHHHHHHCCSEEEE-T---TEEEE
T ss_pred HhccCC-------c-cccC-H---------------HHH---HHHHH-HHHHcCHHHHHHHHhCCcEEEE-C---CEEEE
Confidence 311000 0 0000 0 000 00000 0002356889999875443221 1 47778
Q ss_pred eccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 257 HCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 257 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
|.++..... .+... ...+..+|++++++++|+||+|.-
T Consensus 117 Hg~p~~~~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 117 HGSPRHPIW-EYIYN---ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp SSCSSSTTT-CCCCS---HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred ECCcCCccc-cccCC---hHHHHHHHhccCCCEEEECCcCcc
Confidence 887764321 11111 245677889999999999999963
No 22
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=99.12 E-value=4.4e-09 Score=101.49 Aligned_cols=247 Identities=11% Similarity=0.025 Sum_probs=121.0
Q ss_pred CCCCcEEEEEecCCCCCCc---------hhhHHH----hhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh--
Q 040421 95 PDVPYTFGLIGDLGQTYYS---------NRTLTH----YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER-- 159 (407)
Q Consensus 95 ~~~~~~f~~~gD~~~~~~~---------~~~l~~----~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~-- 159 (407)
+...+||++++|+|.+... ...+++ +.+ .+||+||++||++..... .......+.+.++.
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~--~~~D~VliaGDLfd~~~p---~~~~~~~~~~~lr~~~ 84 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARE--RDVDMILLGGDIFHDNKP---SRKALYQALRSLRLNC 84 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBSSSSC---CHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHh--cCCCEEEEcCccccCCCC---CHHHHHHHHHHHHHhc
Confidence 3468999999999987431 122333 333 389999999999865321 22223333444333
Q ss_pred ----------h----------------------hccCCeEEccCCCccccCCCCCCcccccccccccccCCC----CCC-
Q 040421 160 ----------N----------------------AAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYR----APY- 202 (407)
Q Consensus 160 ----------~----------------------~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----~~~- 202 (407)
| ...+|+|++.||||....... ......+..|.. +..
T Consensus 85 ~g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~------~s~~~lL~~~g~v~l~g~~~ 158 (417)
T 4fbw_A 85 LGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR------YSALDILQVTGLVNYFGRVP 158 (417)
T ss_dssp BSSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----C------CCHHHHHHHTTSCEECCCCC
T ss_pred ccCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccccc------ccHHHHhccCCeEEEeCCcc
Confidence 2 136899999999998421110 000011111110 000
Q ss_pred CCCCe---EEEEecCc--EEEEEEeccccCCCChHH-HHHHHHhccc-cC---CCCCCeEEEEeeccccccCCCCCCCCh
Q 040421 203 STAPF---WYSIRRAS--AHIIVMSCYSAFGKYTPQ-YKWLEKEFPK-VN---RSETPWLIVLMHCPLYNSYVHHYMEGE 272 (407)
Q Consensus 203 ~~~~~---~ysf~~g~--v~fi~Lds~~~~~~~~~Q-~~WL~~~L~~-~~---~~~~~~~iv~~H~P~~~~~~~~~~~~~ 272 (407)
..++. -..+.-|. +.+..+.- .. ++. ..++.+.... .. .....+.|++.|..........+. .
T Consensus 159 ~~~~i~~~pv~l~~g~~~valyG~~~----~~-d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi-p- 231 (417)
T 4fbw_A 159 ENDNIVVSPILLQKGFTKLALYGISN----VR-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL-P- 231 (417)
T ss_dssp ---CEEECCEEEEETTEEEEEEEECC----CC-HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSC-C-
T ss_pred cCCceeEEeEEEEecCceEEEEeccC----Cc-hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccC-c-
Confidence 00000 01122233 34444432 11 222 1344333222 11 123457899999876543221110 1
Q ss_pred hHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccc
Q 040421 273 PMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSA 352 (407)
Q Consensus 273 ~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~ 352 (407)
.-+...++|+|+.||.|..+...... ..+++..+-.|+..... .+.
T Consensus 232 -------~~l~~~~~DyvalGH~H~~~~~~~~~---------------~~~g~~i~~PGS~~~~s------------~~e 277 (417)
T 4fbw_A 232 -------ESFIQDFYDFVLWGHEHECLIDGSYN---------------PTQKFTVVQPGSTIATS------------LSP 277 (417)
T ss_dssp -------GGGSCTTCSEEEEESCCSCEEEEEEE---------------TTTTEEEEECCCSSCSS------------CCH
T ss_pred -------hhHhhcCCCEEEecCccccceecccc---------------CCCCEEEEECCCCCcCC------------Ccc
Confidence 12445689999999999876442100 01333344445443211 010
Q ss_pred eeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEec
Q 040421 353 YREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNR 394 (407)
Q Consensus 353 ~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~ 394 (407)
-.....||..|++.+ ..+.++++.-..-......++.|...
T Consensus 278 ~E~~~kg~~lvei~~-~~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 278 GETAPKHCGILNITG-KDFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp HHHSCCEEEEEEEET-TEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred ccCCCCEEEEEEEEC-CEEEEEEEECCCcccEEEEEEEeecc
Confidence 001247999999964 45888887643334344566666543
No 23
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=99.12 E-value=2.4e-10 Score=99.75 Aligned_cols=140 Identities=17% Similarity=0.177 Sum_probs=83.4
Q ss_pred CcEEEEEecCCCCCCchh----------h----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhcc
Q 040421 98 PYTFGLIGDLGQTYYSNR----------T----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAY 163 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~----------~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (407)
.++|+++||+|.+..... . ++.+.+...++|+|+++||++... ..+....+.++.+.
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-------~~~~~~~~~l~~l~-- 71 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-------NDKNEYLRIWKALP-- 71 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-------CCTTSHHHHHHHSS--
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-------hhHHHHHHHHHHCC--
Confidence 368999999997643211 1 122222223799999999999642 11233445555542
Q ss_pred CCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccc
Q 040421 164 QPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPK 243 (407)
Q Consensus 164 ~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~ 243 (407)
.|+++++||||... ..+...| -+ +. +..|| ++
T Consensus 72 ~~~~~v~GNhD~~~----------~~~~~~~--------------~~----------l~----------~~~~l----~~ 103 (195)
T 1xm7_A 72 GRKILVMGNHDKDK----------ESLKEYF--------------DE----------IY----------DFYKI----IE 103 (195)
T ss_dssp SEEEEECCTTCCCH----------HHHTTTC--------------SE----------EE----------SSEEE----EE
T ss_pred CCEEEEeCCCCCch----------hhhhhhh--------------hc----------hh----------HHHHH----Hh
Confidence 48999999999731 0111111 00 10 11122 11
Q ss_pred cCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 244 VNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 244 ~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
. ...+|+++|+|++......+ ....+.+..++.+++++++|+||+|.....
T Consensus 104 ~----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~ 154 (195)
T 1xm7_A 104 H----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNREG 154 (195)
T ss_dssp E----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSCC
T ss_pred c----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCcc
Confidence 1 12689999999876443211 223567888899999999999999976543
No 24
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=99.11 E-value=6.8e-09 Score=100.59 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=51.9
Q ss_pred CCCCcEEEEEecCCCCCCch---------hhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh--
Q 040421 95 PDVPYTFGLIGDLGQTYYSN---------RTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN-- 160 (407)
Q Consensus 95 ~~~~~~f~~~gD~~~~~~~~---------~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~-- 160 (407)
....+||++++|+|.+.... ..+++++ .. .+||+||++||++.... ........+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~-~~~D~VliaGDlfd~~~---~~~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQE-NEVDFILLGGDLFHENK---PSRKTLHTCLELLRKYCM 104 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHH-TTCSEEEECSCCBSSSS---CCHHHHHHHHHHHHHHHB
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhh-cCCCEEEEcCccccCCC---CCHHHHHHHHHHHHHHhc
Confidence 35789999999999874321 1233322 22 38999999999986532 1223444455555543
Q ss_pred --------------------------------hccCCeEEccCCCccc
Q 040421 161 --------------------------------AAYQPWIWTVGNHEID 176 (407)
Q Consensus 161 --------------------------------~~~~P~~~~~GNHD~~ 176 (407)
...+|++++.||||..
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 1369999999999984
No 25
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=99.11 E-value=2.8e-10 Score=98.78 Aligned_cols=65 Identities=17% Similarity=0.138 Sum_probs=41.4
Q ss_pred CCC-cEEEEEecCCCCCCch-hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCC
Q 040421 96 DVP-YTFGLIGDLGQTYYSN-RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 96 ~~~-~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 173 (407)
... +||+++||+|...... +.++.+.+. ++|+|+++||++. . ...+.++.+ ..|+++++|||
T Consensus 22 ~~g~m~i~~iSD~Hg~~~~l~~~l~~~~~~--~~D~ii~~GDl~~--------~----~~~~~l~~l--~~~~~~V~GNh 85 (190)
T 1s3l_A 22 FQGHMKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVS--------L----FVIKEFENL--NANIIATYGNN 85 (190)
T ss_dssp ----CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCS--------T----HHHHHGGGC--SSEEEEECCTT
T ss_pred hcCCeEEEEEeeCCCCHHHHHHHHHHHhhc--CCCEEEECCCCCC--------H----HHHHHHHhc--CCCEEEEeCCC
Confidence 344 9999999999542211 223333333 7999999999972 1 123333332 46999999999
Q ss_pred ccc
Q 040421 174 EID 176 (407)
Q Consensus 174 D~~ 176 (407)
|..
T Consensus 86 D~~ 88 (190)
T 1s3l_A 86 DGE 88 (190)
T ss_dssp CCC
T ss_pred cch
Confidence 974
No 26
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=99.11 E-value=3.2e-09 Score=91.01 Aligned_cols=63 Identities=16% Similarity=0.040 Sum_probs=41.5
Q ss_pred CCcEEEEEecCCCCCC---chhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCC
Q 040421 97 VPYTFGLIGDLGQTYY---SNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 173 (407)
..+||+++||+|...+ ..+.++++. . ++|+|+++||++.. +..+.++.+ ..|+++++|||
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~--~~D~ii~~GD~~~~------------~~~~~l~~~--~~~v~~V~GNh 83 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-K--EYDGVIGLGDYVDL------------DTVILLEKF--SKEFYGVHGNM 83 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-G--GCSEEEESSCBSCH------------HHHHHHHHH--TSSEEECCCSS
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-c--CCCEEEECCCCCCH------------HHHHHHHhc--CCCEEEEECCC
Confidence 3489999999994221 123334333 2 79999999999831 233344443 25999999999
Q ss_pred ccc
Q 040421 174 EID 176 (407)
Q Consensus 174 D~~ 176 (407)
|..
T Consensus 84 D~~ 86 (178)
T 2kkn_A 84 DYP 86 (178)
T ss_dssp SCG
T ss_pred CcH
Confidence 973
No 27
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=99.08 E-value=6e-09 Score=101.35 Aligned_cols=77 Identities=13% Similarity=0.033 Sum_probs=49.9
Q ss_pred CCCCcEEEEEecCCCCCCc---------hhhHHH----hhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh--
Q 040421 95 PDVPYTFGLIGDLGQTYYS---------NRTLTH----YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER-- 159 (407)
Q Consensus 95 ~~~~~~f~~~gD~~~~~~~---------~~~l~~----~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~-- 159 (407)
....+||++++|+|.+... ...+++ +.+. +||+||++||++..... .......+.+.++.
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~--~~D~VliaGDLfd~~~p---s~~a~~~~~~~Lr~~~ 147 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER--DVDMILLGGDIFHDNKP---SRKALYQALRSLRLNC 147 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT--TCSEEEECSCSBSSSSC---CHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhc--CCCEEEEcCccccCCCC---CHHHHHHHHHHHHHhc
Confidence 3578999999999987432 122332 3333 89999999999865331 22223333444332
Q ss_pred ----------h----------------------hccCCeEEccCCCccc
Q 040421 160 ----------N----------------------AAYQPWIWTVGNHEID 176 (407)
Q Consensus 160 ----------~----------------------~~~~P~~~~~GNHD~~ 176 (407)
| ...+|+|++.||||..
T Consensus 148 ~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 148 LGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp BSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred ccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 1368999999999984
No 28
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.99 E-value=2.6e-09 Score=101.16 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=49.8
Q ss_pred cEEEEEecCCCCCCch----------hhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc-cC
Q 040421 99 YTFGLIGDLGQTYYSN----------RTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA-YQ 164 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~----------~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~ 164 (407)
+||++++|+|.+.... ..+++++ .. .++|+||++||++.... .....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~vl~~GDl~d~~~---~~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQ-ENVDFILIAGDLFHSSR---PSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEESCSBSSSS---CCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHh-cCCCEEEECCCcCCCCC---CCHHHHHHHHHHHHHHHHCCC
Confidence 5899999999875320 2222222 22 38999999999986432 112344556666766653 58
Q ss_pred CeEEccCCCccc
Q 040421 165 PWIWTVGNHEID 176 (407)
Q Consensus 165 P~~~~~GNHD~~ 176 (407)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999984
No 29
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=98.80 E-value=6.7e-08 Score=84.99 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=45.9
Q ss_pred CcEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhh--hHHHHHHhhhhccCCeEEccCCCc
Q 040421 98 PYTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRW--DTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~--~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
.+|++++||+|....... .++.+.+. ++|+|+++||++..... ......| .+..+.++.+. .|+++++||||
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~--~~d~vi~~GDl~~~g~~-~~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD 99 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPR-NALPEGYAPAKVVERLNEVA--HKVIAVRGNCD 99 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTT-SCCCTTBCHHHHHHHHHTTG--GGEEECCCTTC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhc--CCCEEEECCCccccCcc-cccccccCHHHHHHHHHhcC--CceEEEECCCc
Confidence 489999999997532222 22333333 78999999999964221 1111121 34455555442 58999999999
Q ss_pred cc
Q 040421 175 ID 176 (407)
Q Consensus 175 ~~ 176 (407)
..
T Consensus 100 ~~ 101 (208)
T 1su1_A 100 SE 101 (208)
T ss_dssp CH
T ss_pred hH
Confidence 74
No 30
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.64 E-value=3.5e-08 Score=99.00 Aligned_cols=188 Identities=13% Similarity=0.091 Sum_probs=91.9
Q ss_pred CCcEEEEEecCCCCCCc-------hhh----HHHhhhCC--CCC-ceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc
Q 040421 97 VPYTFGLIGDLGQTYYS-------NRT----LTHYELNP--IKG-QTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA 162 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~-------~~~----l~~~~~~~--~~~-d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 162 (407)
..++|+.++|+|..... ... ++++.+.. .++ +++|.+||++..... ......+...+.+..+.
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~--~~~~~~~~~~~~ln~lg- 83 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE--SDLQDAEPDFRGMNLVG- 83 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHH--HHTTTTHHHHHHHHHHT-
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcch--hhhcCCcHHHHHHhccC-
Confidence 57999999999975321 112 23332210 135 799999999843210 00011223344444432
Q ss_pred cCCeEEccCCCccccCCCCCCcccccccccccccCCCC-------CC-CCCCeEEEEecCc--EEEEEEecccc--CC-C
Q 040421 163 YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRA-------PY-STAPFWYSIRRAS--AHIIVMSCYSA--FG-K 229 (407)
Q Consensus 163 ~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~~-~~~~~~ysf~~g~--v~fi~Lds~~~--~~-~ 229 (407)
+-++++||||+.+.. ..+........+|.-. .+ .....|..++.++ +.|+.+.+... +. .
T Consensus 84 --~d~~~~GNHEfd~g~-----~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p 156 (516)
T 1hp1_A 84 --YDAMAIGNHEFDNPL-----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNP 156 (516)
T ss_dssp --CCEEECCGGGGSSCH-----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSC
T ss_pred --CCEEeeccccccCCH-----HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCc
Confidence 447899999995321 0001111111111100 00 0112345567776 56666665321 11 0
Q ss_pred ----------ChHH-HHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 230 ----------YTPQ-YKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 230 ----------~~~Q-~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
..+. .+|+++ |++. .+...+|+++|.|....... ..+......+...+...+||++|+||.|..
T Consensus 157 ~~~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~~ 231 (516)
T 1hp1_A 157 EYFTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQDP 231 (516)
T ss_dssp CSCTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCCB
T ss_pred CccCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCcc
Confidence 0122 334433 4421 24568999999998543221 111011123333444456999999999975
Q ss_pred c
Q 040421 299 E 299 (407)
Q Consensus 299 ~ 299 (407)
.
T Consensus 232 ~ 232 (516)
T 1hp1_A 232 V 232 (516)
T ss_dssp C
T ss_pred c
Confidence 4
No 31
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.63 E-value=6.1e-08 Score=97.98 Aligned_cols=175 Identities=15% Similarity=0.090 Sum_probs=89.6
Q ss_pred CCCcEEEEEecCCCCCC--------------chhh----HHHhhhCCCCCc-eEEEcCCccccCCCCCCCchhhhHHHHH
Q 040421 96 DVPYTFGLIGDLGQTYY--------------SNRT----LTHYELNPIKGQ-TVLFVGDLSYADDYPFHDNNRWDTWGRF 156 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~--------------~~~~----l~~~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~ 156 (407)
...++|+.++|+|.... .... ++++.+. .|| ++|.+||++...... .........+.
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~--~~~~l~l~~GD~~~gs~~~--~~~~~~~~~~~ 102 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWAR--AKNPLFLDAGDVFQGTLYF--NQYRGLADRYF 102 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHH--SSSEEEEECSCCSSSSHHH--HHHTTHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhh--CCCEEEEeCCCCCCCcHHH--HHhCCcHHHHH
Confidence 35799999999996421 1122 2333333 566 889999999532100 00011223333
Q ss_pred HhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCC-----C-----CCCCeEEEEecCc--EEEEEEecc
Q 040421 157 IERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP-----Y-----STAPFWYSIRRAS--AHIIVMSCY 224 (407)
Q Consensus 157 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-----~-----~~~~~~ysf~~g~--v~fi~Lds~ 224 (407)
+..+ -+-++++||||+.+.. ..+..+.+....|.-.. . .....|..++.++ +.|+.+.+.
T Consensus 103 ln~l---g~d~~~lGNHEfd~g~-----~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~ 174 (552)
T 2z1a_A 103 MHRL---RYRAMALGNHEFDLGP-----GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTP 174 (552)
T ss_dssp HHHT---TCCEEECCGGGGTTCH-----HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECT
T ss_pred HHhc---CCCccccccccccCCH-----HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEeccc
Confidence 3332 2447899999995321 00111111111111000 0 0123455677776 566666653
Q ss_pred cc--CC---------CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEEEe
Q 040421 225 SA--FG---------KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFA 292 (407)
Q Consensus 225 ~~--~~---------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~ 292 (407)
.. +. ...++.+.+.+.|++ .+...+|+++|.|.... ..+.++ .+||++|+
T Consensus 175 ~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlg 236 (552)
T 2z1a_A 175 DTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVG 236 (552)
T ss_dssp THHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEE
T ss_pred chhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEe
Confidence 21 00 111334444444543 34568999999985321 122333 58999999
Q ss_pred cccccccc
Q 040421 293 AHVHAYER 300 (407)
Q Consensus 293 GH~H~y~r 300 (407)
||.|....
T Consensus 237 GHtH~~~~ 244 (552)
T 2z1a_A 237 GHSHTLLG 244 (552)
T ss_dssp CSSCCCBS
T ss_pred CCcCcccc
Confidence 99998654
No 32
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.49 E-value=1.2e-06 Score=88.07 Aligned_cols=192 Identities=14% Similarity=0.140 Sum_probs=88.4
Q ss_pred CCCcEEEEEecCCCCCCc-------------hhh----HHHhhhCCCCCc-eEEEcCCccccCCCCCCC---chhhhHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS-------------NRT----LTHYELNPIKGQ-TVLFVGDLSYADDYPFHD---NNRWDTWG 154 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-------------~~~----l~~~~~~~~~~d-~vl~~GD~~y~~~~~~~~---~~~~~~~~ 154 (407)
...++|+.++|+|..... ... ++++.+. .++ ++|.+||++......... ........
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~--~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQ--YDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLV 94 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTT--SSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhc--CCCEEEEECCCcCCCcHHHHHHhhcccCcchHH
Confidence 368999999999965310 112 3333333 455 778899999532110000 00012233
Q ss_pred HHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCC-------CCCCCeEEEEecCc--EEEEEEeccc
Q 040421 155 RFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP-------YSTAPFWYSIRRAS--AHIIVMSCYS 225 (407)
Q Consensus 155 ~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-------~~~~~~~ysf~~g~--v~fi~Lds~~ 225 (407)
+.+..+ -+-++++||||+.+... .+..+.+...+|.-.. ......|.-++.++ +-||.+.+..
T Consensus 95 ~~ln~l---g~D~~t~GNHefd~G~~-----~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~ 166 (527)
T 3qfk_A 95 DFYNRM---AFDFGTLGNHEFNYGLP-----YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQF 166 (527)
T ss_dssp HHHHHT---CCCEECCCGGGGTTCHH-----HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTT
T ss_pred HHHHhc---CCcEEeccccccccCHH-----HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCC
Confidence 333332 23467899999853210 0011111111111100 00112355667777 4566665532
Q ss_pred c--CCC--------ChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCC-C---CChhHHHHHHHHHHhCCCcEEE
Q 040421 226 A--FGK--------YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY-M---EGEPMRVLYEPWFVEYKVDVVF 291 (407)
Q Consensus 226 ~--~~~--------~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~---~~~~~~~~l~~l~~~~~vdlvl 291 (407)
. +.. .....+.+++.+++.. .++..+|+++|.+.-....... . .++.....+..-+ ..+||++|
T Consensus 167 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~-~~giDlIl 244 (527)
T 3qfk_A 167 IPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAF-SKDIDIFI 244 (527)
T ss_dssp GGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHH-GGGCSEEE
T ss_pred cccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchHHHHHHHhc-CCCCcEEE
Confidence 1 110 1112333333333322 3456899999987643211000 0 1111111222222 24899999
Q ss_pred eccccccc
Q 040421 292 AAHVHAYE 299 (407)
Q Consensus 292 ~GH~H~y~ 299 (407)
+||.|...
T Consensus 245 gGHtH~~~ 252 (527)
T 3qfk_A 245 TGHQHRQI 252 (527)
T ss_dssp CCSSCCEE
T ss_pred ECCCCccc
Confidence 99999854
No 33
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=98.43 E-value=6.9e-07 Score=90.09 Aligned_cols=179 Identities=15% Similarity=0.106 Sum_probs=87.3
Q ss_pred CCCcEEEEEecCCCCCCc-----------------hhh----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS-----------------NRT----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWG 154 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-----------------~~~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~ 154 (407)
...++|+.++|+|..... ... ++++.+. ...+++|.+||++...... .........
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~-~~~~l~l~~GD~~~g~~~~--~~~~g~~~~ 99 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRA-EPNVLLLDAGDQYQGTIWF--TVYKGAEVA 99 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHH-CSSEEEEECSCCSSSSHHH--HHHTTHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhh-CCCEEEEECCccCCCchhh--hhhCChHHH
Confidence 357999999999964211 122 2333333 1336999999999542110 001112233
Q ss_pred HHHhhhhccCCeEEccCCCccccCCCCCCccccc-ccccccccCCCCCC----C--------CCCeEEEEecCcE--EEE
Q 040421 155 RFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFK-PFANRFHLPYRAPY----S--------TAPFWYSIRRASA--HII 219 (407)
Q Consensus 155 ~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~-~~~~~f~~P~~~~~----~--------~~~~~ysf~~g~v--~fi 219 (407)
+.+..+. +-++++||||+.+... .+. .+.+....|.-... . ....|.-++.+++ -||
T Consensus 100 ~~ln~lg---~d~~~~GNHEfd~g~~-----~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgii 171 (546)
T 4h2g_A 100 HFMNALR---YDAMALGNHEFDNGVE-----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIV 171 (546)
T ss_dssp HHHHHHT---CSEEECCGGGGTTHHH-----HHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEE
T ss_pred HHHHhcC---CcEEeccCcccccCHH-----HHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEE
Confidence 4444332 3367899999853210 001 11111111111000 0 1134556777775 456
Q ss_pred EEecccc--CC-C-----ChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEE
Q 040421 220 VMSCYSA--FG-K-----YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVF 291 (407)
Q Consensus 220 ~Lds~~~--~~-~-----~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl 291 (407)
.+.+... +. . .....+.+++.+++....++..+|+++|.+.... ..+...+ .+||++|
T Consensus 172 G~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~d------------~~la~~~--~giDlIl 237 (546)
T 4h2g_A 172 GYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMD------------KLIAQKV--RGVDVVV 237 (546)
T ss_dssp EEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH------------HHHHHHS--TTCCEEE
T ss_pred EecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccch------------HHHHHhC--CCCcEEE
Confidence 6654210 00 0 0122333333333221134678999999875310 1222112 3799999
Q ss_pred eccccccc
Q 040421 292 AAHVHAYE 299 (407)
Q Consensus 292 ~GH~H~y~ 299 (407)
+||.|...
T Consensus 238 gGHtH~~~ 245 (546)
T 4h2g_A 238 GGHSNTFL 245 (546)
T ss_dssp CCSSCCCC
T ss_pred eCCcCccc
Confidence 99999854
No 34
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=98.39 E-value=1.2e-06 Score=89.01 Aligned_cols=177 Identities=15% Similarity=0.096 Sum_probs=86.6
Q ss_pred CCCcEEEEEecCCCCCCc------------------hhh----HHHhhhCCCCC-ceEEEcCCccccCCCCCCCchhhhH
Q 040421 96 DVPYTFGLIGDLGQTYYS------------------NRT----LTHYELNPIKG-QTVLFVGDLSYADDYPFHDNNRWDT 152 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~------------------~~~----l~~~~~~~~~~-d~vl~~GD~~y~~~~~~~~~~~~~~ 152 (407)
...++|+.++|+|..... ... ++++.+. .+ .++|.+||++....... ......
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~--~~~~l~l~~GD~~~gs~~~~--~~~g~~ 85 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKK--YKNPLVLHAGDAITGTLYFT--LFGGSA 85 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHH--SSSEEEEECSCCSCSSHHHH--TTTTHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhh--CCCEEEEeCCCCCCCceeee--ecCCHH
Confidence 356999999999965322 112 2333333 34 48999999996421100 011222
Q ss_pred HHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCC---C-----CCC--CCCCeEEEEecCc--EEEEE
Q 040421 153 WGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPY---R-----APY--STAPFWYSIRRAS--AHIIV 220 (407)
Q Consensus 153 ~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~---~-----~~~--~~~~~~ysf~~g~--v~fi~ 220 (407)
..+.|..+ -+-++++||||+.+.. ..+..+.+...+|. | +.. ..-..|.-++.++ +-||.
T Consensus 86 ~~~~ln~l---g~D~~tlGNHEfd~G~-----~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG 157 (579)
T 3ztv_A 86 DAAVMNAG---NFHYFTLGNHEFDAGN-----EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIG 157 (579)
T ss_dssp HHHHHHHH---TCSEEECCSGGGTTHH-----HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEE
T ss_pred HHHHHHhc---CcCeeeccccccccCH-----HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEE
Confidence 33444433 2345789999985321 00111111111111 0 000 0112355567777 56677
Q ss_pred Eec-cc-----cCCC---ChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEE
Q 040421 221 MSC-YS-----AFGK---YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVV 290 (407)
Q Consensus 221 Lds-~~-----~~~~---~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlv 290 (407)
+.+ .. .... .....+-+++.+++........+|+++|.+.-. ... +.++ -+||++
T Consensus 158 ~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~~---la~~~~giDlI 222 (579)
T 3ztv_A 158 LDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NIE---IAQKVNDIDVI 222 (579)
T ss_dssp EECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HHH---HHHHCSSCCEE
T ss_pred EEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHH---HHHhCCCCCEE
Confidence 743 10 0000 112223333333332223466899999987421 012 2222 379999
Q ss_pred Eeccccccc
Q 040421 291 FAAHVHAYE 299 (407)
Q Consensus 291 l~GH~H~y~ 299 (407)
|+||.|...
T Consensus 223 lgGHtH~~~ 231 (579)
T 3ztv_A 223 VTGDSHYLY 231 (579)
T ss_dssp EECSSCCEE
T ss_pred EeCCCCccc
Confidence 999999865
No 35
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=98.35 E-value=1.5e-06 Score=86.91 Aligned_cols=186 Identities=13% Similarity=0.061 Sum_probs=85.7
Q ss_pred CCcEEEEEecCCCCCCc---------------hhh----HHHhhhCCCCCceEEE-cCCccccCCCCCCCchhhhHHHHH
Q 040421 97 VPYTFGLIGDLGQTYYS---------------NRT----LTHYELNPIKGQTVLF-VGDLSYADDYPFHDNNRWDTWGRF 156 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~---------------~~~----l~~~~~~~~~~d~vl~-~GD~~y~~~~~~~~~~~~~~~~~~ 156 (407)
..++|+.++|+|..... ... ++++.+. .++.+++ +||++...... .........+.
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~--~~~~llldaGD~~~g~~~~--~~~~g~~~~~~ 80 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAK--NKATWFFDAGDYFTGPYIS--SLTKGKAIIDI 80 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHH--CSSEEEEECSCCSSSSHHH--HTTTTHHHHHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhc--CCCeEEEECCCCCCCchhh--hhcCChHHHHH
Confidence 46899999999964211 122 2333333 5666555 99998532110 00111223333
Q ss_pred HhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCC---------CCCCCCCeEEEEecCc--EEEEEEeccc
Q 040421 157 IERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYR---------APYSTAPFWYSIRRAS--AHIIVMSCYS 225 (407)
Q Consensus 157 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~---------~~~~~~~~~ysf~~g~--v~fi~Lds~~ 225 (407)
+.. --+-++++||||+.+... .+..+.+....|.- +.......|.-++.++ +-||.+-+..
T Consensus 81 ln~---lg~D~~tlGNHEfd~G~~-----~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~ 152 (509)
T 3ive_A 81 MNT---MPFDAVTIGNHEFDHGWD-----NTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVF 152 (509)
T ss_dssp HTT---SCCSEECCCGGGGTTCHH-----HHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHH
T ss_pred HHh---cCCcEEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCc
Confidence 332 235577899999854210 00011111111110 0000023355667777 4566664311
Q ss_pred -----cC----C--CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCC----CCChhHHHHHHHHHHh-CCCcE
Q 040421 226 -----AF----G--KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY----MEGEPMRVLYEPWFVE-YKVDV 289 (407)
Q Consensus 226 -----~~----~--~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~-~~vdl 289 (407)
.+ . ......+.+++.+++.. .++..+|+++|.+.-....... ..+.... ..+.++ .+||+
T Consensus 153 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk-~~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDl 228 (509)
T 3ive_A 153 AFNDTVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDI 228 (509)
T ss_dssp HHHHHSCGGGCTTEEECCHHHHHHHHHHHHT-TTCSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCE
T ss_pred ccccccccccCCCCEEcCHHHHHHHHHHHHH-hcCCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcE
Confidence 00 0 01122333333333322 2367899999988532111100 0011111 123333 37999
Q ss_pred EEecccccc
Q 040421 290 VFAAHVHAY 298 (407)
Q Consensus 290 vl~GH~H~y 298 (407)
+|+||.|..
T Consensus 229 IlgGHtH~~ 237 (509)
T 3ive_A 229 LITGHAHVG 237 (509)
T ss_dssp EEEESSCCC
T ss_pred EEeCCcCcc
Confidence 999999964
No 36
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=98.28 E-value=3.1e-06 Score=85.45 Aligned_cols=144 Identities=13% Similarity=0.060 Sum_probs=71.4
Q ss_pred Cc-eEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCC----
Q 040421 127 GQ-TVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP---- 201 (407)
Q Consensus 127 ~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~---- 201 (407)
|| ++|.+||++..... ..........+++..+ ..+++ + ||||+.+.. ..+..+.+.+..|.-..
T Consensus 123 pd~Lll~~GD~~~gs~~--~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~-----~~l~~~l~~~~~p~L~aNv~~ 191 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGL--SLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGR-----ERVEELLGLFRGEFLSYNIVD 191 (562)
T ss_dssp CCEEEEECSCCSSSSHH--HHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCH-----HHHHHHHHHCCSEECCSSCEE
T ss_pred CCEEEEeCCCCCCcchh--hhhhCCHHHHHHHHhh--CCcEE-e-cchhcccCH-----HHHHHHHHhCCCCEEEEEEEe
Confidence 78 89999999953210 0000112334445444 34654 7 999985321 00111111111111100
Q ss_pred ---C-CCCCeEEEEecCc--EEEEEEeccc-----------c--CCCChHHHHHHHHhccccCCCCCCeEEEEeeccccc
Q 040421 202 ---Y-STAPFWYSIRRAS--AHIIVMSCYS-----------A--FGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYN 262 (407)
Q Consensus 202 ---~-~~~~~~ysf~~g~--v~fi~Lds~~-----------~--~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 262 (407)
+ ..-..|.-++.++ +.+|.+.+.. . +....+..+-+.+.|++ .+...+|+++|.|...
T Consensus 192 ~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~~ 268 (562)
T 2wdc_A 192 DLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQL 268 (562)
T ss_dssp TTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHHH
T ss_pred cCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCcc
Confidence 0 0112345566776 5666665421 0 11122333333333443 3566899999998532
Q ss_pred cCCCCCCCChhHHHHHHHHHHh-CCCcEEEeccccccc
Q 040421 263 SYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
. ..+.++ .+||++|+||.|...
T Consensus 269 d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 269 D---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp H---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred h---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 0 123334 489999999999754
No 37
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=98.24 E-value=2.3e-05 Score=71.37 Aligned_cols=177 Identities=14% Similarity=0.061 Sum_probs=89.5
Q ss_pred CCcEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCC
Q 040421 97 VPYTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 173 (407)
..+||+++||.+..... ...+.++.++ .++|+++..||.+..... ......+.+..+ ..- ..++|||
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g------~~~~~~~~ln~~--G~D-a~TlGNH 72 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSK-YQADLVIVNAENTTHGKG------LSLKHYEFLKEA--GVN-YITMGNH 72 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHH-HTCSEEEEECTBTTTTSS------CCHHHHHHHHHH--TCC-EEECCTT
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCC------cCHHHHHHHHhc--CCC-EEEEccC
Confidence 36899999999844211 1223444433 157999999999864311 112223333332 122 4588999
Q ss_pred ccccCCCCCCccccccc---ccccccCCCCCCC-CCCeEEEEecCcE--EEEEEeccccCC--CChHHHHHHHHhccccC
Q 040421 174 EIDFAPQLGEAIPFKPF---ANRFHLPYRAPYS-TAPFWYSIRRASA--HIIVMSCYSAFG--KYTPQYKWLEKEFPKVN 245 (407)
Q Consensus 174 D~~~~~~~~~~~~~~~~---~~~f~~P~~~~~~-~~~~~ysf~~g~v--~fi~Lds~~~~~--~~~~Q~~WL~~~L~~~~ 245 (407)
|+.+.+ +..+|-.- ...-++|...... .+..|.-++.+++ -+|.|-+...+. ..+.-.+.+++.++
T Consensus 73 efD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~--- 146 (281)
T 1t71_A 73 TWFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL--- 146 (281)
T ss_dssp TTCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---
T ss_pred cccCCc---cHHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---
Confidence 996431 11111000 0001122211000 2235666777775 455554432122 12223445555555
Q ss_pred CCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 246 RSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 246 ~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
+.+.+.+||.+|.-. ....+.+.. .-.-+||+|+.||+|.....
T Consensus 147 ~~~~diIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~d 190 (281)
T 1t71_A 147 KRDCDLHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSAD 190 (281)
T ss_dssp TCCCSEEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCTT
T ss_pred hcCCCEEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCc
Confidence 256789999999421 111122222 12346999999999986543
No 38
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.98 E-value=5e-05 Score=76.36 Aligned_cols=186 Identities=12% Similarity=0.107 Sum_probs=88.7
Q ss_pred CCCcEEEEEecCCCCCCc-------------hhhH----HHhhhCCCCCc-eEEEcCCccccCCCCCCCchhhhHHHHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS-------------NRTL----THYELNPIKGQ-TVLFVGDLSYADDYPFHDNNRWDTWGRFI 157 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-------------~~~l----~~~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~ 157 (407)
...++|+.++|+|..... ...+ ++..+. .+++ ++|.+||++.................+.|
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~-~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~l 91 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHS-RNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF 91 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHH-TTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHh-cCCCEEEEecCCCCCCccchhhcccCCHHHHHHH
Confidence 468999999999975321 1112 222212 2677 57999999954221100000122223344
Q ss_pred hhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCC--------CC---CCCeEEEEec--Cc--EEEEEEe
Q 040421 158 ERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP--------YS---TAPFWYSIRR--AS--AHIIVMS 222 (407)
Q Consensus 158 ~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--------~~---~~~~~ysf~~--g~--v~fi~Ld 222 (407)
..+. .=++++||||+.+... ....+....+....|.-.+ +. ....|.-++. ++ +-||.+.
T Consensus 92 n~lg---~Da~tlGNHEfD~G~~--~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt 166 (557)
T 3c9f_A 92 IKQD---YDLLTIGNHELYLWEN--SKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFL 166 (557)
T ss_dssp TTSC---CSEECCCGGGSSSHHH--HHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECC
T ss_pred HhcC---CCEEeecchhcccchH--HHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEee
Confidence 3322 3366899999963210 0000111111111121110 00 1123556676 66 4555555
Q ss_pred ccccCC-----C-ChHH--H-HHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh--CCCcE-E
Q 040421 223 CYSAFG-----K-YTPQ--Y-KWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE--YKVDV-V 290 (407)
Q Consensus 223 s~~~~~-----~-~~~Q--~-~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~vdl-v 290 (407)
+...-. . ...+ . +|+++.++ .++..+||++|.+.-... .+ . ......+.+ .++|+ +
T Consensus 167 ~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA~~~~giDilI 234 (557)
T 3c9f_A 167 FDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------GE-F-YQVHQYLRQFFPDTIIQY 234 (557)
T ss_dssp CCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------CH-H-HHHHHHHHHHCTTSEEEE
T ss_pred cCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC------cc-c-cHHHHHHHHhCCCCCEEE
Confidence 421100 0 1112 2 47766553 356789999999862100 11 1 122222222 58995 9
Q ss_pred Eeccccccc
Q 040421 291 FAAHVHAYE 299 (407)
Q Consensus 291 l~GH~H~y~ 299 (407)
|+||.|...
T Consensus 235 lgGHtH~~~ 243 (557)
T 3c9f_A 235 FGGHSHIRD 243 (557)
T ss_dssp EECSSCCEE
T ss_pred ECCCCCCCC
Confidence 999999873
No 39
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.96 E-value=0.00014 Score=64.96 Aligned_cols=170 Identities=12% Similarity=0.155 Sum_probs=83.3
Q ss_pred cEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 99 YTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
+|++++||.=..... ...+.++.++ . |++|..|..+..... -. ....+.+..+ ..-. .++||||+
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~--~-d~vi~ngen~~~G~g--~~----~~~~~~l~~~--G~D~-~T~GNHef 68 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDR--Y-DLVIANGENAARGKG--LD----RRSYRLLREA--GVDL-VSLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGG--C-SEEEEECTTTTTTSS--CC----HHHHHHHHHH--TCCE-EECCTTTT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhh--C-CEEEEeCCCccCCCC--cC----HHHHHHHHhC--CCCE-EEeccEee
Confidence 589999997432211 1234444444 4 888887766643211 11 2223333332 2333 48899999
Q ss_pred ccCCCCCCcccccccccccccCCCCC-CCCCCeEEEEecCcEEEEEEe--ccccCCCChHHHHHHHHhccccCCCCCCeE
Q 040421 176 DFAPQLGEAIPFKPFANRFHLPYRAP-YSTAPFWYSIRRASAHIIVMS--CYSAFGKYTPQYKWLEKEFPKVNRSETPWL 252 (407)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~f~~P~~~~-~~~~~~~ysf~~g~v~fi~Ld--s~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 252 (407)
... +..+|-.-.. .-.|.|-+ +.....|.-++.++.++-+++ +.........-.+-+++.+++.. .+.+
T Consensus 69 D~~----~l~~~l~~~~-~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~I 140 (252)
T 2z06_A 69 DHK----EVYALLESEP-VVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYV 140 (252)
T ss_dssp SCT----THHHHHHHSS-EECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEE
T ss_pred ECc----hHHHHhccCC-ceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEE
Confidence 632 1111110001 11233221 111345667888876655554 32211122222333444444431 6689
Q ss_pred EEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccc
Q 040421 253 IVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300 (407)
Q Consensus 253 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r 300 (407)
||.+|.-. ....+.+. .+-.-+||+|+.||+|....
T Consensus 141 Iv~~H~g~-----------tsek~~la-~~~dg~Vd~VvGgHTHv~t~ 176 (252)
T 2z06_A 141 LVEVHAEA-----------TSEKMALA-HYLDGRASAVLGTHTHVPTL 176 (252)
T ss_dssp EEEEECSC-----------HHHHHHHH-HHHBTTBSEEEEESSCSCBS
T ss_pred EEEeCCCc-----------HHHHHHHH-HhCCCCeEEEEcCCCCcCCC
Confidence 99999532 11112222 22234699999999998543
No 40
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.89 E-value=0.00052 Score=61.50 Aligned_cols=171 Identities=12% Similarity=0.068 Sum_probs=85.6
Q ss_pred cEEEEEecCCCCCCchhh----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 99 YTFGLIGDLGQTYYSNRT----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
+|++++||.=... .... +.++.++ . |++|..|+.+..... - . ....+.+..+ ..- ..++||||
T Consensus 1 m~ilf~GDv~g~~-G~~~~~~~l~~lr~~--~-d~vi~nge~~~~G~g--~-~---~~~~~~l~~~--G~D-a~TlGNHe 67 (255)
T 1t70_A 1 MRVLFIGDVFGQP-GRRVLQNHLPTIRPQ--F-DFVIVNMENSAGGFG--M-H---RDAARGALEA--GAG-CLTLGNHA 67 (255)
T ss_dssp CEEEEECCBBHHH-HHHHHHHHHHHHGGG--C-SEEEEECTBTTTTSS--C-C---HHHHHHHHHH--TCS-EEECCTTT
T ss_pred CEEEEEeccCChH-HHHHHHHHHHHHHhh--C-CEEEECCCCccCCcC--C-C---HHHHHHHHhC--CCC-EEEecccc
Confidence 5899999974221 1222 3344443 4 999988888754311 0 1 1223333332 223 44789999
Q ss_pred cccCCCCCCccccccccc-ccccCCCCC--CCCCCeEEEEecCcEE--EEEEeccccCCCChHHHHHHHHhccccCCCCC
Q 040421 175 IDFAPQLGEAIPFKPFAN-RFHLPYRAP--YSTAPFWYSIRRASAH--IIVMSCYSAFGKYTPQYKWLEKEFPKVNRSET 249 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~-~f~~P~~~~--~~~~~~~ysf~~g~v~--fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 249 (407)
+... +...+-.-.. +.-.|.|-+ +..+..|.-++.++.+ +|.|-+.........-.+-+++.+++. +.
T Consensus 68 fD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~ 140 (255)
T 1t70_A 68 WHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DL 140 (255)
T ss_dssp TSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SC
T ss_pred ccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CC
Confidence 9632 1111100011 111233321 1123456667777754 455544321112233344456666554 46
Q ss_pred CeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 250 PWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 250 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
+.+||.+|.-. ....+.+.. .-.-+||+++.||+|.....
T Consensus 141 d~IIv~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d 180 (255)
T 1t70_A 141 GTVFVDFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTAD 180 (255)
T ss_dssp CEEEEEEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBSC
T ss_pred CEEEEEeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCc
Confidence 68999999421 111222322 22346999999999976543
No 41
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=97.83 E-value=9.2e-05 Score=69.80 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=28.3
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
.++..+|+++|...-........++ ....|..-+ -+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~~~d~~~~~~e~--~~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGIEKQAQSSGAEN--AVFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCCCSSCCCTTCSS--CHHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCccccccccccch--hHHHHHhcC--CCCcEEEECCCCccC
Confidence 4577999999987633211100111 111222222 489999999999853
No 42
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=97.70 E-value=0.00046 Score=64.86 Aligned_cols=47 Identities=19% Similarity=0.217 Sum_probs=27.4
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEEEeccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
.++..+|+++|...-........++. . .++.+ -+||++|.||.|...
T Consensus 200 ~g~D~II~l~H~G~~~d~~~~~~en~--~----~~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGLSADPYQAMAENS--V----YYLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCCCCSCCCTTCSCC--H----HHHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCccccccccccchh--H----HHHhhCCCCCEEEeCCCcccc
Confidence 45778999999876221110001111 1 11223 489999999999854
No 43
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=97.56 E-value=0.00036 Score=69.95 Aligned_cols=75 Identities=15% Similarity=0.103 Sum_probs=41.6
Q ss_pred eEEEEecCcE--EEEEEeccc------c-----CCCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChh
Q 040421 207 FWYSIRRASA--HIIVMSCYS------A-----FGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEP 273 (407)
Q Consensus 207 ~~ysf~~g~v--~fi~Lds~~------~-----~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~ 273 (407)
.|.-++.+++ -||.+-+.. . +...-+..+...++|++ .++..+|+++|...-
T Consensus 135 py~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~------------ 199 (530)
T 4h1s_A 135 PYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE------------ 199 (530)
T ss_dssp SEEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH------------
T ss_pred ceEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch------------
Confidence 3556777775 556665521 0 01111223333344544 456789999996531
Q ss_pred HHHHHHHHHHhC-CCcEEEeccccccc
Q 040421 274 MRVLYEPWFVEY-KVDVVFAAHVHAYE 299 (407)
Q Consensus 274 ~~~~l~~l~~~~-~vdlvl~GH~H~y~ 299 (407)
... .+.++. +||++|.||+|.+-
T Consensus 200 ~d~---~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 200 MDK---LIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp HHH---HHHHHSTTCCEEECCSSCCCB
T ss_pred HHH---HHHhcCCCCCeeccCCcccee
Confidence 111 233333 79999999999753
No 44
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=97.41 E-value=8.8e-05 Score=65.42 Aligned_cols=68 Identities=24% Similarity=0.234 Sum_probs=42.0
Q ss_pred CCcEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 97 VPYTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
...+++++||+|....... .++.+... .++|.++++||++.... . . . +.++.+. ..++++++||||.
T Consensus 11 ~~~~i~visDiHg~~~~l~~~l~~~~~~-~~~d~~i~~GD~~~~g~----~-~--~---~~~~~l~-~~~~~~v~GNhd~ 78 (221)
T 1g5b_A 11 KYRNIWVVGDLHGCYTNLMNKLDTIGFD-NKKDLLISVGDLVDRGA----E-N--V---ECLELIT-FPWFRAVRGNHEQ 78 (221)
T ss_dssp GCSCEEEECCCTTCHHHHHHHHHHHTCC-TTTCEEEECSCCSSSSS----C-H--H---HHHGGGG-STTEEECCCHHHH
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHccCC-CCCCEEEEeCCccCCCC----C-h--H---HHHHHHh-cCCEEEEccCcHH
Confidence 3579999999996532222 22222222 26899999999995421 1 1 1 2222222 3589999999997
Q ss_pred c
Q 040421 176 D 176 (407)
Q Consensus 176 ~ 176 (407)
.
T Consensus 79 ~ 79 (221)
T 1g5b_A 79 M 79 (221)
T ss_dssp H
T ss_pred H
Confidence 4
No 45
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=97.30 E-value=0.00018 Score=65.83 Aligned_cols=68 Identities=22% Similarity=0.275 Sum_probs=40.8
Q ss_pred cEEEEEecCCCCCCchhh-HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRT-LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
++++++||+|........ ++.+... .++|.++++||++.... .. .+..+.+..+. .+++.++||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~-~~~d~~v~lGD~vdrG~----~s---~~~l~~l~~l~--~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFT-PGKDTLWLTGDLVARGP----GS---LDVLRYVKSLG--DSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCC-TTTCEEEECSCCSSSSS----CH---HHHHHHHHHTG--GGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCC-CCCCEEEEeCCcCCCCC----cc---HHHHHHHHhCC--CceEEEECCCcHH
Confidence 478999999975422222 2222221 26799999999996421 11 22333333332 3799999999974
No 46
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.20 E-value=0.002 Score=49.77 Aligned_cols=76 Identities=28% Similarity=0.428 Sum_probs=49.4
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCC---ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTL---KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
.++++.|.|..+.... ...|+|....+.. +.... . ......++|++|+|+|.|.+||..
T Consensus 23 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~--~---------~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 91 (114)
T 2ede_A 23 KPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMET--I---------SGDRLTHQIMDLNLDTMYYFRIQARNS 91 (114)
T ss_dssp CSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEE--E---------ETTCCEEEECSCCSSCEEEEEEEEECS
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEE--E---------CCCceEEEEcCCCCCCEEEEEEEEEeC
Confidence 5689999999875322 3467776643321 11111 0 012335788999999999999954
Q ss_pred ---CCceeeEEEEcCCCCCC
Q 040421 79 ---GNATRQFSFTTPPGVGP 95 (407)
Q Consensus 79 ---~~~s~~~~F~T~p~~~~ 95 (407)
+.+|....|+|.+.+.+
T Consensus 92 ~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 92 KGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp SCBCCCCCCEEEECCCSSCC
T ss_pred CcCcCCcccEEEEecCCCCC
Confidence 35678889999876543
No 47
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.18 E-value=0.00095 Score=52.84 Aligned_cols=75 Identities=21% Similarity=0.128 Sum_probs=49.3
Q ss_pred ccCCCCCcEEEEEEcCCCCC--------CCEEEEeecCCC--CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEE
Q 040421 5 QGDHEGKGVIVSWVTPDEPG--------SNTVLYWAENST--LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYY 74 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 74 (407)
......+++.|.|....... ...|+|...... ....+.. ....++|+||+|+|.|.+
T Consensus 27 ~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~gL~P~T~Y~f 93 (123)
T 2edd_A 27 AVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTATGLKPNTMYEF 93 (123)
T ss_dssp EEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEESCCTTCEEEE
T ss_pred EEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEecCCCCCCEEEE
Confidence 33345689999999653222 456788876321 1111111 123578999999999999
Q ss_pred EeCc------CCceeeEEEEcCCC
Q 040421 75 EVGV------GNATRQFSFTTPPG 92 (407)
Q Consensus 75 ~v~~------~~~s~~~~F~T~p~ 92 (407)
+|.. +.+|....|+|.+.
T Consensus 94 ~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 94 SVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp EEEECCSSSCCCCCCCEEEECCCS
T ss_pred EEEEeCCCcccCCCCCEEEEccCC
Confidence 9954 35788889999865
No 48
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.17 E-value=0.0015 Score=50.13 Aligned_cols=82 Identities=20% Similarity=0.384 Sum_probs=52.5
Q ss_pred eeccCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+++.|.|..+... ....|+|.............. .-...++|++|+|+|.|.+||..
T Consensus 17 l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~V~A 85 (111)
T 1x5l_A 17 IRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLK-----------AVTTRATVSGLKPGTRYVFQVRA 85 (111)
T ss_dssp EECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEE-----------ESSSEEEECSCCTTCEEEECEEE
T ss_pred EEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEec-----------CCCCEEEEcCCCCCCEEEEEEEE
Confidence 444455678999999876432 234677776542221111100 11235688999999999999954
Q ss_pred ------CCceeeEEEEcCCCCCC
Q 040421 79 ------GNATRQFSFTTPPGVGP 95 (407)
Q Consensus 79 ------~~~s~~~~F~T~p~~~~ 95 (407)
+.+|....|+|++.+++
T Consensus 86 ~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 86 RTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EETTEECCCCCCEEEECCCTTSC
T ss_pred EeCCcCCCCcccEEEEcCCCCCC
Confidence 35778889999876543
No 49
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=97.17 E-value=0.00029 Score=63.83 Aligned_cols=68 Identities=21% Similarity=0.160 Sum_probs=39.9
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
..+++++||+|........+-+........|.+|++||++.... .. .+..+.+.. .++++++||||..
T Consensus 18 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~----~~---~~~l~~l~~----~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 18 TGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGP----DS---FGVVRLLKR----LGAYSVLGNHDAK 85 (262)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSS----CH---HHHHHHHHH----HTCEECCCHHHHH
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCC----CH---HHHHHHHHH----CCCEEEeCcChHH
Confidence 34899999999543222222112222112499999999996421 11 122333322 4899999999974
No 50
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=97.08 E-value=0.0037 Score=48.36 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=50.9
Q ss_pred eeccCCCCCcEEEEEEcCCC------CCCCEEEEeecCCC---CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDE------PGSNTVLYWAENST---LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYY 73 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 73 (407)
|.......+++.|.|.-... ...-.|.|...... ..... .+. .. ...++|++|+|+|.|.
T Consensus 15 ~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~--~~~-------~~--~~~~~i~~L~p~t~Y~ 83 (114)
T 1x4y_A 15 TFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--MVE-------GD--RYWHSISHLQPETSYD 83 (114)
T ss_dssp EEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--EEE-------TT--CCEEEECSCCTTCEEE
T ss_pred EEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeE--ecC-------Cc--EeEEEcCCCCCCCEEE
Confidence 34445567899999998741 12246777655432 11111 100 01 1347899999999999
Q ss_pred EEeCc------CCceeeEEEEcCCCCC
Q 040421 74 YEVGV------GNATRQFSFTTPPGVG 94 (407)
Q Consensus 74 Y~v~~------~~~s~~~~F~T~p~~~ 94 (407)
++|.. +.+|....|+|.+.+.
T Consensus 84 ~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 84 IKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp EEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred EEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 99953 3567888999987543
No 51
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.02 E-value=0.0012 Score=50.60 Aligned_cols=78 Identities=17% Similarity=0.316 Sum_probs=48.8
Q ss_pred ccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 5 QGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
......+++.|.|.-+.... ...|+|.............. .-...++|++|+|+|.|.+||..
T Consensus 16 ~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2djs_A 16 QVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYVVQVRART 84 (108)
T ss_dssp EEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEEEEEEEEE
T ss_pred EEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEEe-----------cCccEEEEcCCCCCCEEEEEEEEEe
Confidence 33445689999999875432 23566666543222111100 11234678999999999999964
Q ss_pred ----CCceeeEEEEcCCCC
Q 040421 79 ----GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 ----~~~s~~~~F~T~p~~ 93 (407)
+.+|....|+|++..
T Consensus 85 ~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 85 VAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp SSCEEEECCCEEEECCCSS
T ss_pred CCEECCCCCCEEEEeCCCC
Confidence 246777889998754
No 52
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=96.96 E-value=0.00086 Score=62.05 Aligned_cols=71 Identities=15% Similarity=0.075 Sum_probs=41.7
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc--cCCeEEccCCCcc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA--YQPWIWTVGNHEI 175 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~ 175 (407)
..+++++||+|........+-+.... ...+.++++||++.... .. .+-...+..+.. .-.++.+.||||.
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vflGD~VDRG~----~s---~evl~lL~~lk~~~p~~v~~lrGNHE~ 120 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGK-SPDTNYLFMGDYVDRGY----YS---VETVTLLVALKVRYRERITILRGNHES 120 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCC-TTTSCEEECSCCSSSST----TH---HHHHHHHHHHHHHCTTTEEECCCTTSS
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCC-CCCCEEEEeCCccCCCC----Ch---HHHHHHHHHHHhhCCCcEEEEeCCCCH
Confidence 35799999999754332222222222 25677899999996432 11 122333333322 2358999999998
Q ss_pred c
Q 040421 176 D 176 (407)
Q Consensus 176 ~ 176 (407)
.
T Consensus 121 ~ 121 (309)
T 2ie4_C 121 R 121 (309)
T ss_dssp T
T ss_pred H
Confidence 4
No 53
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.95 E-value=0.00074 Score=51.11 Aligned_cols=76 Identities=24% Similarity=0.225 Sum_probs=47.5
Q ss_pred eeccCCCCCcEEEEEEcCC--CC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPD--EP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~--~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......+++.|.|.... .. ..-.|+|............+ -...+.|+||+|+|.|.++|
T Consensus 15 l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~~~V 81 (103)
T 2edy_A 15 LHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKPDTTYDIKV 81 (103)
T ss_dssp EECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCTTCCEEEEC
T ss_pred eEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCCCCEEEEEE
Confidence 4455556789999999872 11 23467777665422211111 12235789999999999999
Q ss_pred Cc------CCceeeEEEEcCC
Q 040421 77 GV------GNATRQFSFTTPP 91 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p 91 (407)
.. +.+|....|+|.|
T Consensus 82 ~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 82 RAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEECSSCBCCCCCCCCCCCCC
T ss_pred EEECCCCCCCCCCCEEEEecc
Confidence 64 2456666677754
No 54
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=96.93 E-value=0.0038 Score=47.67 Aligned_cols=71 Identities=21% Similarity=0.243 Sum_probs=47.1
Q ss_pred CCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
...+++.|.|.-+..... ..|+|....+..+..... . ...++|++|+|+|.|.+||..
T Consensus 21 ~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~--~~~~~l~~L~p~t~Y~~~V~A~n~~G 87 (108)
T 2dm4_A 21 EAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRA-----------A--SNFTEIKNLLVNTLYTVRVAAVTSRG 87 (108)
T ss_dssp TCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEEE-----------S--SSEEEECSCCSSCEEEEEEEEEESSC
T ss_pred cCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEecC-----------C--ccEEEeCCCCCCCEEEEEEEEECCCc
Confidence 356899999998753222 456676665433332211 0 125789999999999999964
Q ss_pred -CCceeeEEEEcCC
Q 040421 79 -GNATRQFSFTTPP 91 (407)
Q Consensus 79 -~~~s~~~~F~T~p 91 (407)
+.+|....|+|.+
T Consensus 88 ~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 88 IGNWSDSKSITTIK 101 (108)
T ss_dssp EEEECCCEEEECCS
T ss_pred eeCCCCCEEEECCC
Confidence 2467778888854
No 55
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.88 E-value=0.0019 Score=49.32 Aligned_cols=73 Identities=21% Similarity=0.289 Sum_probs=46.7
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
...+++.|.|..+...+ ...|+|............+ ....++|++|+|+|.|.+||..
T Consensus 19 ~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~Y~frV~A~n~~G 85 (106)
T 1x4x_A 19 RSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATTYYCRVQALSVVG 85 (106)
T ss_dssp EETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCEEEEEEEEECSSC
T ss_pred cCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCEEEEEEEEEcCCc
Confidence 34689999999875322 2356666544322111111 1124678999999999999954
Q ss_pred -CCceeeEEEEcCCCC
Q 040421 79 -GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 -~~~s~~~~F~T~p~~ 93 (407)
+.+|....++|.+..
T Consensus 86 ~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 86 AGPFSEVVACVTPPSS 101 (106)
T ss_dssp CCCBCCCEEEECCCCC
T ss_pred CCCCcCCEEEECCCCC
Confidence 246788889997653
No 56
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.87 E-value=0.0028 Score=48.65 Aligned_cols=75 Identities=21% Similarity=0.345 Sum_probs=47.1
Q ss_pred cCCCCCcEEEEE--EcCCCC---CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 6 GDHEGKGVIVSW--VTPDEP---GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 6 g~~~~~~~~v~W--~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
.....+++.|.| .-+... ..-.|+|....+ . .. +... ... ++|+||+|+|.|.+||..
T Consensus 19 ~~~~~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~--~----~~---~~~~--~~~----~~i~~L~p~t~Y~f~V~A~~ 83 (107)
T 1x5a_A 19 VKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE--E----WH---QMVL--EPR----VLLTKLQPDTTYIVRVRTLT 83 (107)
T ss_dssp EEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC--E----EE---EEES--SSE----EEEESCCSSCEEEEEEEEEC
T ss_pred EecCCCEEEEEECCCCCCCCCCceEEEEEEEeCCC--C----ce---EEEe--cce----EEECCCCCCCEEEEEEEEEC
Confidence 334568999999 655322 223566655411 0 01 1100 111 899999999999999954
Q ss_pred ----CCceeeEEEEcCCCCCC
Q 040421 79 ----GNATRQFSFTTPPGVGP 95 (407)
Q Consensus 79 ----~~~s~~~~F~T~p~~~~ 95 (407)
+.+|....|+|.+..++
T Consensus 84 ~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 84 PLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp SSSCCCCCCCEEEECCCCSCC
T ss_pred CCccCCCCCCEEEEECCCCCC
Confidence 35788889999886554
No 57
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=96.85 E-value=0.0094 Score=57.94 Aligned_cols=178 Identities=13% Similarity=0.133 Sum_probs=95.3
Q ss_pred CCCcEEEEEecCCCCCCch---hh---HHHhhh-C---------CCCCceEEEcCCccccCCCCCC----C---------
Q 040421 96 DVPYTFGLIGDLGQTYYSN---RT---LTHYEL-N---------PIKGQTVLFVGDLSYADDYPFH----D--------- 146 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~~---~~---l~~~~~-~---------~~~~d~vl~~GD~~y~~~~~~~----~--------- 146 (407)
....++++++|.+.+.... .. +..++. + ..+..-+|++||.+...+.... .
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 3567999999999987531 11 222221 0 1367889999999965421000 0
Q ss_pred --chhhhHHHHHHhhhhccCCeEEccCCCccccCCCCCCccccc--------ccccccccCCCCCCCCCCeEEEEecCcE
Q 040421 147 --NNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFK--------PFANRFHLPYRAPYSTAPFWYSIRRASA 216 (407)
Q Consensus 147 --~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~--------~~~~~f~~P~~~~~~~~~~~ysf~~g~v 216 (407)
....+.+-+++..+...+|+...|||||-. +.... +.++. .|. .+.. ..|. |.|+++++
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~-~~~lP-Qqplh~~lfp~s~~~~-~~~~-------vtNP-~~~~i~G~ 346 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPT-NYTLP-QQPLHPCMFPLATAYS-TLQL-------VTNP-YQATIDGV 346 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSS-CSSSS-CCCCCTTSCHHHHTST-TEEE-------CCSS-EEEEETTE
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcc-cccCC-CCCcCHHHhhhhhhcC-ccEE-------eCCC-eEEEECCE
Confidence 013344556677778899999999999974 21111 11111 110 1111 1122 56888999
Q ss_pred EEEEEeccc-----cCCCChHHHHHHHHhccccCC-CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEE
Q 040421 217 HIIVMSCYS-----AFGKYTPQYKWLEKEFPKVNR-SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVV 290 (407)
Q Consensus 217 ~fi~Lds~~-----~~~~~~~Q~~WL~~~L~~~~~-~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlv 290 (407)
+|++..... .+...+.-++.|++.|+.-.- ..++=.+ |.|+.... .+++-+.-.+++
T Consensus 347 ~~LgtsGqnidDi~ky~~~~~~l~~me~~LkwrHlAPTaPdTl-----~~yP~~~~------------DpfVi~~~PhVy 409 (476)
T 3e0j_A 347 RFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTL-----GCYPFYKT------------DPFIFPECPHVY 409 (476)
T ss_dssp EEEECSSHHHHHHHHHSCCCCHHHHHHHHHHBTCSCTTSCCC-----------CCS------------CTTSCSSCCSEE
T ss_pred EEEEECCCCHHHHHhcCCCCCHHHHHHHHHHHhccCCCCCCce-----eeccCCCC------------CceeecCCCcEE
Confidence 999876532 123344567788888875100 1111000 11111000 012224457899
Q ss_pred Eeccccccccc
Q 040421 291 FAAHVHAYERS 301 (407)
Q Consensus 291 l~GH~H~y~r~ 301 (407)
++||.|.|+-.
T Consensus 410 f~Gnq~~f~t~ 420 (476)
T 3e0j_A 410 FCGNTPSFGSK 420 (476)
T ss_dssp EEEEESSCEEE
T ss_pred EeCCCCcccee
Confidence 99999998744
No 58
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.78 E-value=0.0036 Score=48.74 Aligned_cols=79 Identities=19% Similarity=0.286 Sum_probs=49.4
Q ss_pred eccCCCCCcEEEEEEcCC-CC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 4 TQGDHEGKGVIVSWVTPD-EP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~-~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.......++++|.|..+. .. ....|+|.......+.... . ...-...++|++|+|+|.|.+||..
T Consensus 25 ~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~~V~A 94 (120)
T 1x5f_A 25 VASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN------T----SHPGEMQVTIQNLMPATVYIFRVMA 94 (120)
T ss_dssp EEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE------C----SSTTCSEEEECSCCTTCEEEEEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE------e----ccCCccEEEeCCCCCCCEEEEEEEE
Confidence 333445678999999865 22 1246777776432221110 0 0112345789999999999999964
Q ss_pred C------CceeeEEEEcCCC
Q 040421 79 G------NATRQFSFTTPPG 92 (407)
Q Consensus 79 ~------~~s~~~~F~T~p~ 92 (407)
- .+|....|+|.+.
T Consensus 95 ~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 95 QNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp ECSSCEEEECCCEEEECCCC
T ss_pred ECCCccCCCCCCEEEEeCCC
Confidence 1 3567788999754
No 59
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=96.77 E-value=0.0018 Score=59.86 Aligned_cols=72 Identities=17% Similarity=0.113 Sum_probs=40.9
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCcc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEI 175 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 175 (407)
..+++++||+|........+-+....+...+.++++||++.... +. .+-...+..+. ..-.++.+.||||.
T Consensus 59 ~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~----~s---~evl~lL~~lk~~~p~~v~~lrGNHE~ 131 (315)
T 3h63_A 59 TEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGS----FS---VEVILTLFGFKLLYPDHFHLLRGNHET 131 (315)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSST----TH---HHHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCc----Ch---HHHHHHHHHhhhhcCCcEEEEecCccc
Confidence 56999999999764332222222222113356999999996532 11 11222332222 22358899999996
Q ss_pred c
Q 040421 176 D 176 (407)
Q Consensus 176 ~ 176 (407)
.
T Consensus 132 ~ 132 (315)
T 3h63_A 132 D 132 (315)
T ss_dssp H
T ss_pred c
Confidence 4
No 60
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=96.77 E-value=0.004 Score=47.44 Aligned_cols=77 Identities=16% Similarity=0.167 Sum_probs=47.0
Q ss_pred CCCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 7 DHEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
....+ +.|.|.-+... ..-.|+|.......+.... .... ...-...++|++|+|+|.|.+||..
T Consensus 17 ~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~---~~~~----~~~~~~~~~i~~L~p~t~Y~~rV~A~n~ 88 (105)
T 2haz_A 17 PYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW---YDAK----EASMEGIVTIVGLKPETTYAVRLAALNG 88 (105)
T ss_dssp ECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEE---EEHH----HHHHHSEEEECSCCTTCEEEEEEEEEET
T ss_pred EcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccce---EEcc----ccCCccEEEECCCCCCCEEEEEEEEEcC
Confidence 33345 99999987432 1235777776543221110 0000 0012245689999999999999954
Q ss_pred ---CCceeeEEEEcCC
Q 040421 79 ---GNATRQFSFTTPP 91 (407)
Q Consensus 79 ---~~~s~~~~F~T~p 91 (407)
+..|....|+|.|
T Consensus 89 ~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 89 KGLGEISAASEFKTQP 104 (105)
T ss_dssp TEECCCCCCEEEECCC
T ss_pred CccCCCcCCEeeEEec
Confidence 3567888899976
No 61
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.77 E-value=0.0014 Score=50.94 Aligned_cols=78 Identities=14% Similarity=0.074 Sum_probs=48.3
Q ss_pred eccCCCCCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 4 TQGDHEGKGVIVSWVTPDEPG--------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
.......+++.|+|.-..... ...|+|............ ...-...++|+||+|+|.|.++
T Consensus 16 ~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~-----------~~~~~~~~~i~gL~P~T~Y~f~ 84 (113)
T 1x5j_A 16 QASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----------ANATTLSYLVTGLKPNTLYEFS 84 (113)
T ss_dssp EEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEE-----------CCBCSSEEEEESCCTTCEECCE
T ss_pred EEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEE-----------EecCcCEEEeCCCCCCcEEEEE
Confidence 334445789999999764221 346778763211111000 0011235789999999999999
Q ss_pred eCc------CCceeeEEEEcCCC
Q 040421 76 VGV------GNATRQFSFTTPPG 92 (407)
Q Consensus 76 v~~------~~~s~~~~F~T~p~ 92 (407)
|.. +.+|....++|.+.
T Consensus 85 V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 85 VMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp EEEECSSCBCCCCCCCCEECCCS
T ss_pred EEEecCCccCCCcccEEeeccCC
Confidence 954 35777788888765
No 62
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=96.73 E-value=0.0016 Score=60.74 Aligned_cols=70 Identities=20% Similarity=0.203 Sum_probs=40.9
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 176 (407)
.+++++||+|........+-+.... ...+-+|++||++.... +. .+-...+..+. ..-.++.+.||||..
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~-~~~~~~vflGD~VDRG~----~s---~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGF-PPESNYLFLGDYVDRGK----QS---LETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCS-TTSSCEEECSCCSSSSS----CH---HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHHHHHHHHHHhCC-CCcceEEeCCCcCCCCC----Ch---HHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 4689999999764333222222222 24577999999996532 11 12233332222 223589999999974
No 63
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.72 E-value=0.0023 Score=49.33 Aligned_cols=74 Identities=16% Similarity=0.283 Sum_probs=47.8
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
...++++|.|.-..... ...|+|.......+..+. . ......+|++|+|+|.|.|||..
T Consensus 22 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t~Y~frV~A~n~~G 89 (110)
T 2db8_A 22 THNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY-V-----------GKETMCTVDGLHFNSTYNARVKAFNKTG 89 (110)
T ss_dssp CSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE-E-----------ESCSCEEEECCCSSSCCEEEEEEECSSC
T ss_pred cCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE-e-----------CCcCEEEECCCCCCCEEEEEEEEEeCCc
Confidence 35689999999875322 245777665432232211 0 01123678999999999999954
Q ss_pred -CCceeeEEEEcCCCC
Q 040421 79 -GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 -~~~s~~~~F~T~p~~ 93 (407)
+.+|....|+|.+.+
T Consensus 90 ~s~~S~~~~~~T~~~p 105 (110)
T 2db8_A 90 VSPYSKTLVLQTSEGS 105 (110)
T ss_dssp BCCCCSCEECCCCCCC
T ss_pred CCCCCCCEEEEcCCCC
Confidence 246777888888754
No 64
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=96.71 E-value=0.0024 Score=59.49 Aligned_cols=73 Identities=19% Similarity=0.118 Sum_probs=41.8
Q ss_pred CCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCc
Q 040421 97 VPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHE 174 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD 174 (407)
...+++++||+|........+-+....+..-+.+|++||++.... .. .+-...+..+. ..-.++.+.||||
T Consensus 62 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~----~s---~evl~lL~~lk~~~p~~v~llrGNHE 134 (335)
T 3icf_A 62 PDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGS----WS---CEVALLFYCLKILHPNNFFLNRGNHE 134 (335)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSST----TH---HHHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred cCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCc----Ch---HHHHHHHHHHhhhCCCcEEEecCchh
Confidence 467999999999865433222222222112356999999996532 11 11222222222 2245899999999
Q ss_pred cc
Q 040421 175 ID 176 (407)
Q Consensus 175 ~~ 176 (407)
..
T Consensus 135 ~~ 136 (335)
T 3icf_A 135 SD 136 (335)
T ss_dssp SH
T ss_pred hh
Confidence 63
No 65
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.64 E-value=0.0037 Score=48.72 Aligned_cols=76 Identities=24% Similarity=0.328 Sum_probs=47.6
Q ss_pred CCCcEEEEEEcCCC--CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------CC
Q 040421 9 EGKGVIVSWVTPDE--PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------GN 80 (407)
Q Consensus 9 ~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------~~ 80 (407)
..++++|.|..... .....|+|............... . .....++|+||+|+|.|.++|.. +.
T Consensus 31 ~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~~~~~---~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 101 (119)
T 2ee2_A 31 SSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQV---T------SQEYSARLENLLPDTQYFIEVGACNSAGCGP 101 (119)
T ss_dssp ETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCEEEEE---E------TTCSEEEECSCCTTCEEEEEEEEECSSSCCC
T ss_pred cCCEEEEEecCCCCCccceEEEEEEECCCcccCcEEEEc---C------CCEeEEEECCCCCCCEEEEEEEEEcCCccCC
Confidence 46789999998743 22356777665432211111010 0 11235789999999999999954 34
Q ss_pred ceeeEEEEcCCCC
Q 040421 81 ATRQFSFTTPPGV 93 (407)
Q Consensus 81 ~s~~~~F~T~p~~ 93 (407)
+|....|+|.+.+
T Consensus 102 ~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 102 PSDMIEAFTKKAS 114 (119)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 6777889997654
No 66
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=96.63 E-value=0.0018 Score=60.91 Aligned_cols=73 Identities=16% Similarity=0.025 Sum_probs=42.3
Q ss_pred CCcEEEEEecCCCCCCchhhHHHhhhCC-------CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh-----ccC
Q 040421 97 VPYTFGLIGDLGQTYYSNRTLTHYELNP-------IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-----AYQ 164 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~-------~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 164 (407)
...+++++||+|........+-+..... .++|.++++||++.... +. .+....+..+. ...
T Consensus 69 ~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~----~s---~evl~~l~~l~~~~~~~~~ 141 (342)
T 2z72_A 69 GIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGH----QV---NEVLWFMYQLDQQARDAGG 141 (342)
T ss_dssp CCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSS----CH---HHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCC----CH---HHHHHHHHHHHHHHhhCCC
Confidence 4679999999996543222221111110 14789999999996432 11 12223333221 234
Q ss_pred CeEEccCCCccc
Q 040421 165 PWIWTVGNHEID 176 (407)
Q Consensus 165 P~~~~~GNHD~~ 176 (407)
+++.+.||||..
T Consensus 142 ~v~~v~GNHE~~ 153 (342)
T 2z72_A 142 MVHLLMGNHEQM 153 (342)
T ss_dssp EEEECCCHHHHH
T ss_pred eEEEEecCCcHH
Confidence 699999999974
No 67
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.62 E-value=0.0025 Score=48.87 Aligned_cols=75 Identities=15% Similarity=0.251 Sum_probs=48.8
Q ss_pred cCCCCCcEEEEEEcCCCCC----CCEEEEeecCC-C-C-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDEPG----SNTVLYWAENS-T-L-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.....+++.|.|.-+.... ...|+|....+ . . ...... .. ..++|++|+|+|.|.+||..
T Consensus 17 ~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~-----------~~--~~~~i~~L~p~t~Y~~~V~A 83 (109)
T 2e7h_A 17 TRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKT-----------SE--NRAELRGLKRGASYLVQVRA 83 (109)
T ss_dssp EEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEEE-----------SS--SEEEEESCCTTSCEEEEEEE
T ss_pred EecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEcc-----------CC--CEEEECCCCCCCeEEEEEEE
Confidence 3345689999998874322 34677776541 1 1 111111 01 25789999999999999954
Q ss_pred ------CCceeeEEEEcCCCC
Q 040421 79 ------GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 ------~~~s~~~~F~T~p~~ 93 (407)
+.+|....|+|.+..
T Consensus 84 ~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 84 RSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp ECSSCBCCCCSCEECCCCCCS
T ss_pred EeCCccCCCCCCEEEEcCCCC
Confidence 356788889998754
No 68
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=96.62 E-value=0.0043 Score=47.47 Aligned_cols=76 Identities=18% Similarity=0.251 Sum_probs=47.1
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.....+.++++++|..+..+. ...|+|..... ... . . .-...++|+||+|||.|.++|..
T Consensus 14 l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~----~~~--~---~------~~~t~~~i~gL~PgT~Y~~~V~A 78 (104)
T 2dle_A 14 VTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD----SSN--L---N------VSEPRAVIPGLRSSTFYNITVCP 78 (104)
T ss_dssp EEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC----EEE--E---E------ESSSEEECCSCCSSCEEEEEEEE
T ss_pred EEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC----eEE--E---c------CCCCEEEECCCCCCCEEEEEEEE
Confidence 4455557789999999764332 25666664321 111 0 0 11235789999999999999865
Q ss_pred --C---CceeeEEEEcCCCC
Q 040421 79 --G---NATRQFSFTTPPGV 93 (407)
Q Consensus 79 --~---~~s~~~~F~T~p~~ 93 (407)
+ ..+....++|.|.+
T Consensus 79 ~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 79 VLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp ESSSCCCBCEEEEEECCCCS
T ss_pred EECCcccCCeeEEEEccCCC
Confidence 2 22345577887654
No 69
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.60 E-value=0.0093 Score=45.21 Aligned_cols=77 Identities=12% Similarity=0.125 Sum_probs=48.9
Q ss_pred eeccCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+++.|.|...... ....|+|............. . ...++|++|+|+|.|.++|..
T Consensus 14 l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~--------~-----~~~~~i~~L~p~t~Y~~~V~A 80 (106)
T 2ed8_A 14 LQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEV--------D-----GLSYKLEGLKKFTEYSLRFLA 80 (106)
T ss_dssp EEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEEE--------C-----SSCEEEESCCTTCEEEEEEEE
T ss_pred eEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEeC--------C-----ccEEEECCCCCCCEEEEEEEE
Confidence 344445578999999987422 23467776655432221110 0 134678999999999999964
Q ss_pred C------CceeeEEEEcCCC
Q 040421 79 G------NATRQFSFTTPPG 92 (407)
Q Consensus 79 ~------~~s~~~~F~T~p~ 92 (407)
- .+|....|+|...
T Consensus 81 ~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 81 YNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp ECSSCEEEECCCEEEECCCC
T ss_pred EeCCccCCCcCCEEEEcCCC
Confidence 2 3567778888653
No 70
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.59 E-value=0.0033 Score=50.72 Aligned_cols=77 Identities=22% Similarity=0.277 Sum_probs=46.8
Q ss_pred ccCCCCCcEEEEEEcCCCCCC-------------CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCE
Q 040421 5 QGDHEGKGVIVSWVTPDEPGS-------------NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTK 71 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~~-------------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 71 (407)
+....+++++|+|.-+..+.. -.|+|..+......... +. +-...++|+||+|+|.
T Consensus 26 v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~-----~~------g~~ts~~v~~L~P~T~ 94 (137)
T 1wk0_A 26 ASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSV-----YV------GEETNITLNDLKPAMD 94 (137)
T ss_dssp EESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEE-----EE------ESCSEEEECSCCTTCE
T ss_pred EEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEE-----Ee------cCccEEEEcCCCCCCE
Confidence 345568999999998654311 12344333221111110 00 1124578999999999
Q ss_pred EEEEeCc------CCceeeEEEEcCCC
Q 040421 72 YYYEVGV------GNATRQFSFTTPPG 92 (407)
Q Consensus 72 Y~Y~v~~------~~~s~~~~F~T~p~ 92 (407)
|..||.. +..|....|+|++.
T Consensus 95 Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 95 YHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp ECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 9999954 34677788999864
No 71
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=96.55 E-value=0.0033 Score=62.01 Aligned_cols=72 Identities=17% Similarity=0.104 Sum_probs=41.2
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh--hccCCeEEccCCCcc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN--AAYQPWIWTVGNHEI 175 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD~ 175 (407)
..+++++||+|........+-+....+...+.+|++||++.... . . .+-...+..+ .....++.++||||.
T Consensus 212 ~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~----~--s-~e~~~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 212 TEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGS----F--S-VEVILTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp SCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSST----T--H-HHHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCc----c--h-HHHHHHHHHHHhhCCCceEeecCCccH
Confidence 57999999999764332222222222213356999999996432 1 1 1112222221 224579999999996
Q ss_pred c
Q 040421 176 D 176 (407)
Q Consensus 176 ~ 176 (407)
.
T Consensus 285 ~ 285 (477)
T 1wao_1 285 D 285 (477)
T ss_dssp H
T ss_pred H
Confidence 3
No 72
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.54 E-value=0.0048 Score=46.98 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=47.9
Q ss_pred eeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG--- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~--- 79 (407)
|.......+++.|.|.-+.......|+|.......+.... .. .. ... .++|+||+|+|.|.++|..-
T Consensus 15 l~~~~~~~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~-~~-~~-----~~~---~~~l~~L~p~t~Y~~~V~A~~~~ 84 (104)
T 2dkm_A 15 LTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEER-EV-QV-----GRP---EVLLDGLEPGRDYEVSVQSLRGP 84 (104)
T ss_dssp CEEEEECSSEEEEECCCCSSCSEEEEEEEESSSCCSSCCE-EE-EE-----SSS---EEEEESCCTTCCEEEEEEEECSS
T ss_pred eEEEecCCCEEEEEEeCCCCCCeEEEEEEECCCCCCcceE-EE-ec-----CCC---EEEECCCCCCCEEEEEEEEECCC
Confidence 3444456789999997765443456777765432111000 00 00 111 68999999999999999652
Q ss_pred Cce--eeEEEEcCCCC
Q 040421 80 NAT--RQFSFTTPPGV 93 (407)
Q Consensus 80 ~~s--~~~~F~T~p~~ 93 (407)
+.| ....++|.|..
T Consensus 85 ~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 85 EGSEARGIRARTPTSG 100 (104)
T ss_dssp SBCCCEEEECCCCCCS
T ss_pred CCCCCEEEEEEcCCCC
Confidence 222 34467777654
No 73
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.53 E-value=0.0084 Score=45.88 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=47.6
Q ss_pred CCCCCcEEEEEEcCCC-C----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 7 DHEGKGVIVSWVTPDE-P----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~-~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
....++++|.|..+.. . ....|+|.......+..+. . .....++|++|+|++.|.+||..
T Consensus 20 ~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t~Y~frV~A~n~ 87 (110)
T 2crz_A 20 RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q-----------GSEVECTVSSLLPGKTYSFRLRAANK 87 (110)
T ss_dssp CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E-----------ESCSEEEEESCCTTCEEEECCEEECS
T ss_pred ccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e-----------CCcEEEEECCcCCCCEEEEEEEEEcC
Confidence 3456799999976532 1 2356777765443333221 1 01234678999999999999954
Q ss_pred ---CCceeeEEEEcCCCC
Q 040421 79 ---GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 ---~~~s~~~~F~T~p~~ 93 (407)
+.+|....++|.+.+
T Consensus 88 ~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 88 MGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SCBCCCCCCEEEECCCSC
T ss_pred CccCCCCCccccccCCCC
Confidence 346777788887643
No 74
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.52 E-value=0.006 Score=47.28 Aligned_cols=76 Identities=22% Similarity=0.325 Sum_probs=47.3
Q ss_pred CCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 7 DHEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
....+++.|.|.-...... ..|+|............ . ...-...++|++|+|+|.|.+||..
T Consensus 28 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 97 (119)
T 2ed7_A 28 LVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----T------TQPGSLQLTVGNLKPEAMYTFRVVAYNEW 97 (119)
T ss_dssp EECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----C------CCTTCCEEEECSCCSSSEEEECCEEEESS
T ss_pred ecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----e------ecCCceEEEeCCCCCCCEEEEEEEEEcCC
Confidence 3356789999987643222 35566655433222110 0 0111345789999999999999954
Q ss_pred --CCceeeEEEEcCCC
Q 040421 79 --GNATRQFSFTTPPG 92 (407)
Q Consensus 79 --~~~s~~~~F~T~p~ 92 (407)
+.+|....++|.+.
T Consensus 98 G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 98 GPGESSQPIKVATQPE 113 (119)
T ss_dssp CBCSCCCCEEEECCCC
T ss_pred ccCCCcCCEEEEeCCC
Confidence 24677888888764
No 75
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.48 E-value=0.0047 Score=47.58 Aligned_cols=79 Identities=14% Similarity=0.268 Sum_probs=49.5
Q ss_pred eeccCCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP--GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
|.......+++.|.|...... ....|+|............. .. ...++|++|+|+|.|.+||..-
T Consensus 24 l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~--~~~~~i~~L~p~t~Y~~~V~A~n 91 (115)
T 1x5z_A 24 FKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITI----------EP--GTSYRLQGLKPNSLYYFRLAARS 91 (115)
T ss_dssp EEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEE----------CS--SSEEEEECCCTTCEEEECEEEEC
T ss_pred CEeeeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEec----------CC--CcEEEECCCCCCCeEEEEEEEEC
Confidence 444555678999999987432 23456666544322211110 01 1357889999999999999642
Q ss_pred -----CceeeEEEEcCCCC
Q 040421 80 -----NATRQFSFTTPPGV 93 (407)
Q Consensus 80 -----~~s~~~~F~T~p~~ 93 (407)
.+|....|+|.+..
T Consensus 92 ~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 92 PQGLGASTAEISARTMQSS 110 (115)
T ss_dssp SSCEEEECCCEEEECCCCC
T ss_pred CCcccCCCcCEEEecCCCC
Confidence 35677889987653
No 76
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=96.47 E-value=0.0029 Score=58.03 Aligned_cols=69 Identities=22% Similarity=0.266 Sum_probs=40.2
Q ss_pred EEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 176 (407)
+++++||+|........+-+....+ ..+-+|++||++.... .. .+-...+..+. ....++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDrG~----~s---~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRGK----QS---LETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCST-TSSCEEECSCCSSSSS----CH---HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCC-CCccEEeCCcccCCCC----Cc---HHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 6899999998753332222222222 4577899999996532 11 11222222222 223589999999974
No 77
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.46 E-value=0.0039 Score=48.18 Aligned_cols=71 Identities=23% Similarity=0.331 Sum_probs=46.5
Q ss_pred CCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 9 EGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
..+++.|.|...... ....|+|..........+.. ....++|++|+|+|.|.++|..
T Consensus 30 ~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 96 (116)
T 1x5g_A 30 SPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-------------SSHSYTINGLKKYTEYSFRVVAYNKHGP 96 (116)
T ss_dssp ETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-------------CSSEEEECSCCTTCEEEEEEEEECSSCC
T ss_pred CCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEec-------------CCceEEEcCCCCCCEEEEEEEEEcCCCc
Confidence 467899999886422 23467777665433322211 1235788999999999999954
Q ss_pred CCceeeEEEEcCCC
Q 040421 79 GNATRQFSFTTPPG 92 (407)
Q Consensus 79 ~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.+.
T Consensus 97 g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 97 GVSTPDVAVRTLSD 110 (116)
T ss_dssp CCBCCCCCEECCCS
T ss_pred CCCCCCEEEECCCC
Confidence 24677778888754
No 78
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=96.41 E-value=0.0034 Score=58.77 Aligned_cols=70 Identities=16% Similarity=0.107 Sum_probs=41.1
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 176 (407)
.+++++||+|........+-+.... ...+-+|++||++.... .. .+-...+..+. ..-.++.+.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~-~~~~~~vfLGD~VDRG~----~s---~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGS-PANTRYLFLGDYVDRGY----FS---IECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCC-TTTCCEEECSCCSSSST----TH---HHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhcCC-CCCcEEEECCCccCCCc----Ch---HHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 3689999999875333322222233 25678999999996532 11 11122222222 223589999999974
No 79
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.40 E-value=0.0086 Score=45.72 Aligned_cols=74 Identities=22% Similarity=0.156 Sum_probs=45.9
Q ss_pred CCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---
Q 040421 8 HEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG--- 79 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~--- 79 (407)
...++++|.|...... ....|+|.............. .....++|++|+|+|.|.|||..-
T Consensus 19 ~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~v~~L~p~t~Y~frV~A~n~~ 87 (109)
T 1x5x_A 19 AGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD-----------GEDLAYTVKNLRRSTKYKFKVIAYNSE 87 (109)
T ss_dssp ECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE-----------ESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred ccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEe-----------CCccEEEECCCCCCCEEEEEEEEEeCC
Confidence 3568999999876432 224666766543211111111 012246789999999999999652
Q ss_pred ---CceeeEEEEcCCC
Q 040421 80 ---NATRQFSFTTPPG 92 (407)
Q Consensus 80 ---~~s~~~~F~T~p~ 92 (407)
.+|....++|.+.
T Consensus 88 G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 88 GKSNPSEVVEFTTCPD 103 (109)
T ss_dssp CEEEECCCEEEECCCC
T ss_pred CCcCCccCEEeEeCCC
Confidence 3566778888764
No 80
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=96.35 E-value=0.03 Score=42.43 Aligned_cols=80 Identities=18% Similarity=0.280 Sum_probs=47.6
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
|.+.+.+.+++.|.|.-+... ..-.|.|...... ...... .. .-...++|+||+|||.|.++|..-
T Consensus 9 l~v~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~-----v~------~~~~~~~l~~L~p~t~Y~~~V~A~~ 77 (104)
T 2rb8_A 9 IEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTID-----LT------EDENQYSIGNLKPDTEYEVSLISRR 77 (104)
T ss_dssp EEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEEecCCeEEEEEcCCCCccceEEEEEEECcCCCceEEEE-----cC------CCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 555566788999999876422 2346778765421 121111 11 112346899999999999999642
Q ss_pred ----CceeeEEEEcCCCC
Q 040421 80 ----NATRQFSFTTPPGV 93 (407)
Q Consensus 80 ----~~s~~~~F~T~p~~ 93 (407)
.......|+|.+..
T Consensus 78 ~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 78 GDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp TTEECCCEEEEEECCC--
T ss_pred CCccCCCEEEEEECCCCc
Confidence 12234578887653
No 81
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.34 E-value=0.0056 Score=48.38 Aligned_cols=77 Identities=14% Similarity=0.227 Sum_probs=47.1
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC----
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---- 79 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---- 79 (407)
...+++.|.|..+.... ...|+|............ . .. ......++|++|+|+|.|.++|..-
T Consensus 39 ~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~--~~------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 109 (130)
T 1wfo_A 39 VRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV-E--VL------APSARQYTATGLKPESVYLFRITAQTRKG 109 (130)
T ss_dssp ECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE-E--EE------CTTCCEEEEESCCSSSEEEEEEEEECSSC
T ss_pred cCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEE-E--Ee------CCCceEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 35678999998764322 346677665432111000 0 00 1123457889999999999999642
Q ss_pred --CceeeEEEEcCCCC
Q 040421 80 --NATRQFSFTTPPGV 93 (407)
Q Consensus 80 --~~s~~~~F~T~p~~ 93 (407)
.+|....|+|.+..
T Consensus 110 ~g~~S~~~~~~T~~~~ 125 (130)
T 1wfo_A 110 WGEAAEALVVTTEKRS 125 (130)
T ss_dssp EEEEEEEEEECCSSCC
T ss_pred CCCCcccEEEecCCCC
Confidence 35677788887643
No 82
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=96.33 E-value=0.019 Score=43.43 Aligned_cols=73 Identities=12% Similarity=0.166 Sum_probs=45.1
Q ss_pred cCCCCCcEEEEEEcCCC------CCCCEEEEeecCCCC---ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 6 GDHEGKGVIVSWVTPDE------PGSNTVLYWAENSTL---KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
....++++.|.|..+.. ...-.|.|....... .... . +. . . ...++|.+|+|+|.|..+|
T Consensus 14 ~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~--~---v~--~--~--~~~~~l~~L~p~t~Y~v~V 82 (102)
T 3n1f_C 14 EAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRD--V---VE--G--S--KQWHMIGHLQPETSYDIKM 82 (102)
T ss_dssp EECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEE--E---EE--T--T--CSEEEECSCCTTCEEEEEE
T ss_pred EEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEE--E---Ec--C--C--ceEEECCCCCCCCEEEEEE
Confidence 34457899999998642 112468888765421 1111 1 11 1 1 1236899999999999998
Q ss_pred Cc------CCceeeEEEEc
Q 040421 77 GV------GNATRQFSFTT 89 (407)
Q Consensus 77 ~~------~~~s~~~~F~T 89 (407)
.. +..|....++|
T Consensus 83 ~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 83 QCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EEEETTEECCCCCCEEEEC
T ss_pred EEECCCcCCCCCCCEEeec
Confidence 53 34566667776
No 83
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=96.32 E-value=0.0038 Score=61.06 Aligned_cols=70 Identities=17% Similarity=0.162 Sum_probs=41.2
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc--cCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA--YQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~~ 176 (407)
.+++++||+|........+-++...+ ..+-+|++||++.... .. .+-...+..+.. .-.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p-~~d~yVFLGDyVDRGp----~S---~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSP-ANTRYLFLGDYVDRGY----FS---IECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCT-TTCCEEECSCCSSSSS----CH---HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCC-CcceEEEcCCcCCCCC----CH---HHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 46899999997654333332233332 4588999999996532 11 112222222221 23489999999974
No 84
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=96.30 E-value=0.0097 Score=46.29 Aligned_cols=75 Identities=20% Similarity=0.339 Sum_probs=46.6
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---Cc
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---NA 81 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---~~ 81 (407)
+.++++|.|......+ ...|+|.......+..... . . .....++|.+|+|++.|.+||..- +.
T Consensus 20 ~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~-~---~------~~~~~~~l~~L~p~t~Y~frV~A~N~~G~ 89 (114)
T 2kbg_A 20 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK-V---Q------GNKDHIILEHLQWTMGYEVQITAANRLGY 89 (114)
T ss_dssp STTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE-E---E------TTTCCEEECCCCTTCCEEEEEEEECTTSC
T ss_pred CCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE-c---C------CCcCEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence 5789999997643222 2478888875433332211 1 1 111246799999999999999652 22
Q ss_pred --eeeEEEEcCCCC
Q 040421 82 --TRQFSFTTPPGV 93 (407)
Q Consensus 82 --s~~~~F~T~p~~ 93 (407)
.....|+|.+.+
T Consensus 90 s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 90 SEPTVYEFSMPPKP 103 (114)
T ss_dssp EEEEEEEECCCCCC
T ss_pred cCCcCCEEEcCCCC
Confidence 234578887653
No 85
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.27 E-value=0.009 Score=45.11 Aligned_cols=76 Identities=16% Similarity=0.206 Sum_probs=47.1
Q ss_pred ccCCCCCcEEEEEEcCCC--CCCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 5 QGDHEGKGVIVSWVTPDE--PGSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
......++++|.|..... .....|+|...... .+..+.. .....++|++|+|++.|.+||..
T Consensus 16 ~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~t~Y~~~V~A~n~ 83 (106)
T 2dju_A 16 VTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDG------------VATTRYSIGGLSPFSEYAFRVLAVNS 83 (106)
T ss_dssp EEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCC------------CCSSEEEEESCCTTCEEEEEEEEECS
T ss_pred EEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccC------------CCccEEEEeCCCCCcEEEEEEEEEeC
Confidence 333356799999997631 12356777665432 1211110 11224678999999999999964
Q ss_pred ---CCceeeEEEEcCCC
Q 040421 79 ---GNATRQFSFTTPPG 92 (407)
Q Consensus 79 ---~~~s~~~~F~T~p~ 92 (407)
+.+|....++|.+.
T Consensus 84 ~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 84 IGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp SCBCCCCCCEEEECCCS
T ss_pred CccCCCcccEEeEcCCC
Confidence 24567778888764
No 86
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.21 E-value=0.026 Score=43.28 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=50.1
Q ss_pred eeeccCCCCCcEEEEEEcCCC-CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 2 HITQGDHEGKGVIVSWVTPDE-PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
.|.+.+.+++++.|+|.-... ...-.|+|....+.....+... .-...+.|++|+|+|.|..+|..
T Consensus 13 ~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~v~-----------~~~t~~~l~~L~p~T~Y~v~V~A~~ 81 (108)
T 2ee3_A 13 HLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAP-----------GNATSAMLGPLSSSTTYTVRVTCLY 81 (108)
T ss_dssp CEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEEEE-----------TTCCEEEECSCCSSCEEEEEEEEEC
T ss_pred eEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEEcC-----------CCcCEEEcCCCCCCCEEEEEEEEEe
Confidence 356667788999999987542 2345788887654222111100 01235789999999999999954
Q ss_pred -CCce--eeEEEEcCCCC
Q 040421 79 -GNAT--RQFSFTTPPGV 93 (407)
Q Consensus 79 -~~~s--~~~~F~T~p~~ 93 (407)
.+.+ -...|+|.+.+
T Consensus 82 ~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 82 PGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp TTSCEEEEEEEEECCCCC
T ss_pred CCCcCCCccCEEEeCCCC
Confidence 1222 23368887433
No 87
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.19 E-value=0.009 Score=46.96 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=45.4
Q ss_pred ccCCCCCcEEEEEEcCCCCC----CC-EEEEeec---CC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 5 QGDHEGKGVIVSWVTPDEPG----SN-TVLYWAE---NS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~----~~-~v~y~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
..+.+.++++|.|.-+...+ .. ...|-.. .. ..+..+. . .....++|++|+|+|.|.+|
T Consensus 24 v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~------~------~~~t~~~v~gL~p~t~Y~fr 91 (120)
T 1wfu_A 24 VGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIY------T------GYATRHVVEGLEPRTLYKFR 91 (120)
T ss_dssp CCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEE------E------ESCSEEEEESCCTTCEEEEE
T ss_pred eceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEe------c------CCccEEEECCCCCCCEEEEE
Confidence 34456789999998875322 22 3344332 11 1111111 0 01123789999999999999
Q ss_pred eCcC------CceeeEEEEcCCC
Q 040421 76 VGVG------NATRQFSFTTPPG 92 (407)
Q Consensus 76 v~~~------~~s~~~~F~T~p~ 92 (407)
|..- .+|+...++|.+.
T Consensus 92 V~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 92 LKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCCCccEeeEcCCC
Confidence 9652 3567788898764
No 88
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=96.19 E-value=0.037 Score=41.53 Aligned_cols=66 Identities=20% Similarity=0.251 Sum_probs=42.2
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+...+.+++.|.|.-+... ....|+|............ . . ..-...++|+||+|+|.|.++|..
T Consensus 8 l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~-~---~------~~~~t~~~i~~L~p~t~Y~~~V~A 74 (100)
T 3b83_A 8 IKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTV-D---L------TSSITSLTLTNLEPNTTYEIRIVA 74 (100)
T ss_dssp EEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEE-E---E------CTTEEEEEECSCCTTCEEEEEEEE
T ss_pred cEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEE-E---E------CCcceEEEECCCCCCCEEEEEEEE
Confidence 555566788999999876432 2356778765432211110 0 0 112346789999999999999965
No 89
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.14 E-value=0.0098 Score=46.11 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=50.9
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCC-------CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEE
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENST-------LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYY 73 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 73 (407)
+|.+.+.+.++++|.|...... ....|+|...... ......-. .. .-...++|+||+|+|.|.
T Consensus 14 ~L~v~~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~---v~------~~~t~~~l~gL~PgT~Y~ 84 (112)
T 2cui_A 14 QLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM---VP------GTRHSAVLRDLRSGTLYS 84 (112)
T ss_dssp CCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE---EE------TTCCEEEECSCCTTCEEE
T ss_pred ceEEEeecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEE---cC------CCcCEEEeCCCCCCCEEE
Confidence 4667777889999999976432 3567888775432 00000001 11 112368999999999999
Q ss_pred EEeCc---CCce--eeEEEEcCCCC
Q 040421 74 YEVGV---GNAT--RQFSFTTPPGV 93 (407)
Q Consensus 74 Y~v~~---~~~s--~~~~F~T~p~~ 93 (407)
.+|.. +..+ -....+|.+.+
T Consensus 85 ~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 85 LTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp EEEEEECSSSEEEEEEEEEECCCCS
T ss_pred EEEEEEECCcccCCEEEEEEECCCC
Confidence 98854 2233 34467777643
No 90
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.09 E-value=0.028 Score=44.10 Aligned_cols=76 Identities=16% Similarity=0.177 Sum_probs=48.6
Q ss_pred CCCCCcEEEEEEcCCCCC---CCEEEEeecCC----CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-
Q 040421 7 DHEGKGVIVSWVTPDEPG---SNTVLYWAENS----TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~- 78 (407)
...++++.|+|..+...+ .-.|.|++.+. ...... .+ ...-...++|+||+|+|.|..+|..
T Consensus 26 a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~--~v--------~~~~~~~~~l~~L~p~T~Y~~~V~A~ 95 (120)
T 1ujt_A 26 VLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL--DA--------KVPTERSAVLVNLKKGVTYEIKVRPY 95 (120)
T ss_dssp CCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE--EC--------CCTTCCEEEEESCCSSEEEEEEEEEE
T ss_pred EccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEE--Ee--------cCCCcCEEEECCCCCCCEEEEEEEEE
Confidence 345789999999642211 24788887654 111111 10 0112346789999999999999943
Q ss_pred -----CCceeeEEEEcCCC
Q 040421 79 -----GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -----~~~s~~~~F~T~p~ 92 (407)
+..|....|+|+..
T Consensus 96 n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 96 FNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp SSSCCCCCCCCEEEEECSS
T ss_pred CCCccCCCCCCEEEECCCC
Confidence 35677888999754
No 91
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=96.07 E-value=0.03 Score=48.06 Aligned_cols=77 Identities=14% Similarity=0.074 Sum_probs=47.7
Q ss_pred ccCCCCCcEEEEEEcCC-----CCCCCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 5 QGDHEGKGVIVSWVTPD-----EPGSNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~-----~~~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
......+++.|.|.... ....-.|+|..... ..+....-. .......+|++|+|+|.|.|||..
T Consensus 124 ~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~L~p~t~Y~~~V~A 193 (214)
T 2ibg_A 124 IEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIE----------GAHARSFKIAPLETATMYEFKLQS 193 (214)
T ss_dssp CBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEE----------CTTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeecc----------CCcceEEEeCCCCCCCEEEEEEEE
Confidence 33445678999999873 11234677776554 222221110 011124678999999999999954
Q ss_pred ------CCceeeEEEEcCC
Q 040421 79 ------GNATRQFSFTTPP 91 (407)
Q Consensus 79 ------~~~s~~~~F~T~p 91 (407)
+.+|....++|..
T Consensus 194 ~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 194 FSAASASEFSALKQGRTQR 212 (214)
T ss_dssp ECSSCBCCCCCCEEEECCC
T ss_pred EcCCccCCCcceEeeEecC
Confidence 2467778888864
No 92
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=96.00 E-value=0.029 Score=42.03 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=42.8
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.|.+.+.++++++|+|..+..+ ....|+|...... ..... ... .-.-.++|+||+|+|.|.++|..
T Consensus 7 ~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~~~------~~~t~~~l~gL~P~t~Y~~~V~A 74 (98)
T 3tes_A 7 NLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAINL-----TVP------GSERSYDLTGLKPGTEYTVSIYG 74 (98)
T ss_dssp EEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEEE-----EEE------TTCSEEEECSCCTTCEEEEEEEE
T ss_pred ceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceEEE-----EcC------CCcCEEEECCCCCCCEEEEEEEE
Confidence 3566677889999999987532 2346778876421 11111 111 11235789999999999999965
No 93
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.96 E-value=0.0086 Score=46.54 Aligned_cols=84 Identities=15% Similarity=0.205 Sum_probs=50.0
Q ss_pred eeccCCCCCcEEEEEEcCCC------CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPDE------PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......+++.|.|..... .....|+|............ ... .....-...++|++|+|+|.|.++|
T Consensus 22 ~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~i~~L~p~t~Y~~~V 95 (122)
T 1va9_A 22 VTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS--IVE----MKATGDSEVYTLDNLKKFAQYGVVV 95 (122)
T ss_dssp EEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB--CCB----CCCCSSEEEEEEESCCSSCCEEEEE
T ss_pred eEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceE--EEE----EecCCceeEEEeCCCCCCCEEEEEE
Confidence 33444456899999998753 12346777665532111000 000 0011224667899999999999999
Q ss_pred Cc------CCceeeEEEEcCCC
Q 040421 77 GV------GNATRQFSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p~ 92 (407)
.. +.+|....|+|...
T Consensus 96 ~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 96 QAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEEETTEECCCCCCEECCCCSS
T ss_pred EEEcCCCCCCCccCEEEEeCCC
Confidence 54 34677778888754
No 94
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.94 E-value=0.008 Score=46.96 Aligned_cols=71 Identities=15% Similarity=0.288 Sum_probs=46.2
Q ss_pred CCCcEEEEEEcCCC--C----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 9 EGKGVIVSWVTPDE--P----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
..+++.|.|..+.. . ....|+|........... . ......++|.+|+|+|.|.++|..
T Consensus 41 ~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------~------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 108 (124)
T 2ed9_A 41 NSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------L------EPNNLWYLFTGLEKGSQYSFQVSAMTVN 108 (124)
T ss_dssp ETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------E------CSSCSEEEEECCCSSCEEEECEEEECSS
T ss_pred CCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------e------cCCcCEEEEcCCCCCCEEEEEEEEEcCC
Confidence 35789999988753 1 124677777654322111 1 112235688999999999999954
Q ss_pred --CCceeeEEEEcCC
Q 040421 79 --GNATRQFSFTTPP 91 (407)
Q Consensus 79 --~~~s~~~~F~T~p 91 (407)
+.+|....|+|+.
T Consensus 109 G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 109 GTGPPSNWYTAETPE 123 (124)
T ss_dssp CBCCCCCCEEEECCC
T ss_pred ccCCCCCCEEEECCC
Confidence 3467788888864
No 95
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.85 E-value=0.041 Score=41.49 Aligned_cols=71 Identities=15% Similarity=0.294 Sum_probs=44.1
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-----
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG----- 79 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~----- 79 (407)
..+++.|.|..+.... .-.|+|.......+.... .. .-...++|++|+|+|.|.+||..-
T Consensus 19 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 87 (107)
T 2dn7_A 19 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----FG------KDDQHFTVTGLHKGTTYIFRLAAKNRAGL 87 (107)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----EE------TTCCEEEEECCCTTCEEEEEEEEEETTEE
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEE-----eC------CCccEEEeCCCCCCCEEEEEEEEEcCCcc
Confidence 5689999999874322 346777766543332211 00 112356789999999999999652
Q ss_pred -CceeeEEEEcCC
Q 040421 80 -NATRQFSFTTPP 91 (407)
Q Consensus 80 -~~s~~~~F~T~p 91 (407)
..+. ..|+|..
T Consensus 88 g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 88 GEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEE-EEEECCC
T ss_pred cCCee-eEEeCCC
Confidence 2344 4577754
No 96
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.84 E-value=0.013 Score=46.27 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=46.3
Q ss_pred eccCCCCCcEEEEEEcCCCCC-CC-EEEEeecC-----------CCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCC
Q 040421 4 TQGDHEGKGVIVSWVTPDEPG-SN-TVLYWAEN-----------STLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDT 70 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~-~~-~v~y~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 70 (407)
.....+.++++|.|..+...+ .. .++|.... ...+..+.. . .....+|+||+|+|
T Consensus 24 ~~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~-~-----------~~~~~~v~gL~p~t 91 (127)
T 2dmk_A 24 ELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN-I-----------KQNHYTVHGLQSGT 91 (127)
T ss_dssp EEEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE-E-----------CSSEEEEESCCSSC
T ss_pred EEEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec-c-----------cCCeEEECCCCCCC
Confidence 334445689999999875432 22 67776511 112222211 1 01135789999999
Q ss_pred EEEEEeCcC-----CceeeEEEEcCCC
Q 040421 71 KYYYEVGVG-----NATRQFSFTTPPG 92 (407)
Q Consensus 71 ~Y~Y~v~~~-----~~s~~~~F~T~p~ 92 (407)
.|.|||..- ..|....++|++.
T Consensus 92 ~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 92 RYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred EEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 999999652 2456677888753
No 97
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.80 E-value=0.016 Score=44.71 Aligned_cols=66 Identities=18% Similarity=0.219 Sum_probs=39.6
Q ss_pred eeccCCCCCcEEEEEEcCCCCC---CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG---SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....+++.|.|.-....+ ...|+|.......+.... . ...-...++|++|+|+|.|.+||..
T Consensus 24 l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~-----~-----~~~~~~~~~i~~L~p~t~Y~~~V~A 92 (118)
T 2yrz_A 24 LVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLN-----I-----PNPAQTSVVVEDLLPNHSYVFRVRA 92 (118)
T ss_dssp CEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEE-----E-----SCTTCCEEEEESCCTTCEEEEEEEE
T ss_pred eEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEE-----c-----CCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 3444556789999998875432 234566554432221111 0 0111235778999999999999965
No 98
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.77 E-value=0.0079 Score=46.69 Aligned_cols=81 Identities=19% Similarity=0.256 Sum_probs=47.1
Q ss_pred eeccCCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......++++|.|......... .|+|............ .. ...-...++|++|+|+|.|.+||..
T Consensus 25 l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~~--------~~~~~~~~~i~~L~p~t~Y~~~V~A 95 (121)
T 2dlh_A 25 VQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWM-KH--------NVADSQITTIGNLVPQKTYSVKVLA 95 (121)
T ss_dssp EEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSC-CC--------CCSSCSEECCBSCCSSCEEEEEEEE
T ss_pred cEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccE-EE--------ecCCceEEEecCCCCCCEEEEEEEE
Confidence 444455678999999987433222 3444433221100000 00 0011235689999999999999954
Q ss_pred ------CCceeeEEEEcCCC
Q 040421 79 ------GNATRQFSFTTPPG 92 (407)
Q Consensus 79 ------~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.+.
T Consensus 96 ~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 96 FTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EESSCBCCCCCCEEEECCCC
T ss_pred EeCCccCCCCCCEEEECCCC
Confidence 34677788998754
No 99
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=95.77 E-value=0.05 Score=46.46 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=52.4
Q ss_pred eeccCCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP--GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
|.......++++|.|...... ..-.|+|...++....... . .. .-...++|++|+|+|.|.++|..-
T Consensus 29 l~~~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~-~---~~------~~~~~~~i~~L~p~t~Y~~~V~a~~ 98 (203)
T 2gee_A 29 LSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED-F---VD------SSVGYYTVTGLEPGIDYDISVYTVK 98 (203)
T ss_dssp EEEECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE-E---EE------TTCCEEEECSCCTTCEEEEEEEEES
T ss_pred cEEEecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE-E---cC------CCccEEEeCCCCCCCEEEEEEEEEe
Confidence 455555678999999987532 1356777766543221111 1 00 112356789999999999999642
Q ss_pred --CceeeEEEEcCCCCCCCCCcEEEEEec
Q 040421 80 --NATRQFSFTTPPGVGPDVPYTFGLIGD 106 (407)
Q Consensus 80 --~~s~~~~F~T~p~~~~~~~~~f~~~gD 106 (407)
+.+....+++.........+++...++
T Consensus 99 ~~g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 99 NGGESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp SSCBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCccccEeeeecCCCcCCCceEEEEcCC
Confidence 334433444432222234455544444
No 100
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=95.75 E-value=0.065 Score=45.84 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=47.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC--------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP--------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYY 74 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 74 (407)
|.......++++|.|.-+..+ ..-.|+|.............. .-...++|++|+|+|.|.+
T Consensus 11 l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 79 (211)
T 3p4l_A 11 VQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN-----------ATTLSYLVTGLKPNTLYEF 79 (211)
T ss_dssp EEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEE-----------ESSSEEEECSCCTTCEEEE
T ss_pred EEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeC-----------CCceEEEecCcCCCCEEEE
Confidence 444455678999999975311 135677776543211111111 1133577899999999999
Q ss_pred EeCc------CCceeeEEEEcCCC
Q 040421 75 EVGV------GNATRQFSFTTPPG 92 (407)
Q Consensus 75 ~v~~------~~~s~~~~F~T~p~ 92 (407)
+|.. +.+|....++|.+.
T Consensus 80 ~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 80 SVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp EEEEEETTEECCCCCCEEEECCCC
T ss_pred EEEEEcCCCCCccceeEeeecccC
Confidence 9964 23566778888653
No 101
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.74 E-value=0.025 Score=44.57 Aligned_cols=80 Identities=21% Similarity=0.287 Sum_probs=48.0
Q ss_pred eeccCCCCCcEEEEEEcCCC--CCCC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPDE--PGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~--~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......+++.|.|..... .... .|+|...... ....... .......++|++|+|+|.|.++|
T Consensus 25 l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~~~~~~----~~~~~~~~~i~~L~p~t~Y~~~V 94 (132)
T 1x5h_A 25 LSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTETL----VSGTQLSQLIEGLDRGTEYNFRV 94 (132)
T ss_dssp EEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECCB----CCTTCCEEEEECCCSSCEEEEEC
T ss_pred eEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------CccEEEE----eCCCccEEEeCCCCCCCEEEEEE
Confidence 44455567899999998753 2222 3444443210 0000000 11223467889999999999999
Q ss_pred Cc------CCceeeEEEEcCCC
Q 040421 77 GV------GNATRQFSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p~ 92 (407)
.. +.+|....|+|.+.
T Consensus 95 ~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 95 AALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEEETTEEEEECCCEEEECCSS
T ss_pred EEEcCCccCCCCcCEEeEcCcc
Confidence 65 24677788999763
No 102
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=95.74 E-value=0.026 Score=42.04 Aligned_cols=66 Identities=17% Similarity=0.223 Sum_probs=40.4
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....++++|.|..+... ....|+|............ . .. .-...++|.||+|+|.|.++|..
T Consensus 8 l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~-~---~~------~~~~~~~i~~L~p~t~Y~~~V~A 74 (98)
T 3teu_A 8 LQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKEL-T---VP------PSSTSVTITGLTPGVEYVVSVYA 74 (98)
T ss_dssp EEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEE-E---EC------TTCSEEEECSCCTTCEEEEEEEE
T ss_pred eEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEEE-E---cC------CCcCEEEecCCCCCCEEEEEEEE
Confidence 344444568999999987432 2356778765432111110 0 10 12335789999999999999965
No 103
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=95.71 E-value=0.037 Score=43.24 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=44.3
Q ss_pred CCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 9 EGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
..+ ++|.|.-+.... .-.|+|.......+..... ... ...-...++|++|+|+|.|.+||..
T Consensus 20 ~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~---~~~----~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G 91 (122)
T 2e3v_A 20 SST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY---DAK----EASMEGIVTIVGLKPETTYAVRLAALNGKG 91 (122)
T ss_dssp SSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEE---EHH----HHHTTTEEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCccccee---eee----ecCccceEEeCCCCCCCEEEEEEEEEeCCc
Confidence 345 999999764322 2356666655433311100 000 0011235789999999999999954
Q ss_pred -CCceeeEEEEcCCC
Q 040421 79 -GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.|.
T Consensus 92 ~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 92 LGEISAASEFKTQPV 106 (122)
T ss_dssp ECCCCCCEEEECCCC
T ss_pred cCCCcccccccccCC
Confidence 34667777877664
No 104
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.71 E-value=0.03 Score=44.17 Aligned_cols=82 Identities=23% Similarity=0.197 Sum_probs=47.9
Q ss_pred eeccCCCCCcEEEEEEcC--CCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTP--DEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~--~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......++++|.|... .... ...|+|........... .... .......++|++|+|+|.|.++|
T Consensus 25 l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~------~~~~~~~~~i~~L~p~t~Y~~~V 96 (134)
T 2edx_A 25 VMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH--VVDG------ISREHSSWDLVGLEKWTEYRVWV 96 (134)
T ss_dssp EEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE--EECC------CBTTCSEEEEESCCTTCEEEEEE
T ss_pred cEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE--EEEe------eCCCccEEEeCCCCCCCEEEEEE
Confidence 344444567999999987 2222 23455555443211100 0000 01223457889999999999999
Q ss_pred Cc------CCceeeEEEEcCCC
Q 040421 77 GV------GNATRQFSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p~ 92 (407)
.. +.+|....|+|.+.
T Consensus 97 ~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 97 RAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp EEEETTBCCCCCCCEEEECCCC
T ss_pred EEEcCCCcCCCCCCEEeecCCC
Confidence 54 34677778888754
No 105
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.70 E-value=0.018 Score=44.53 Aligned_cols=73 Identities=12% Similarity=0.194 Sum_probs=44.6
Q ss_pred CCCCcEEEEEEcCCCCCCC----EEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 8 HEGKGVIVSWVTPDEPGSN----TVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~~~----~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
...+++.|.|......... .|+|..... ..+..+. . ... ..++|.+|+|+|.|.|||..
T Consensus 29 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~---------~~~--~~~~v~~L~p~t~Y~frV~A~n~~ 96 (118)
T 1x3d_A 29 RTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY-M---------GSQ--KQFKITKLSPAMGCKFRLSARNDY 96 (118)
T ss_dssp EETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE-E---------ESC--SEEEEESCCTTCEEEEECCEEESS
T ss_pred cCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEee-c---------cCC--cEEEeCCCCCCCEEEEEEEEEECC
Confidence 3467899999987533333 444544433 1222111 1 011 34588999999999999964
Q ss_pred --CCceeeEEEEcCCC
Q 040421 79 --GNATRQFSFTTPPG 92 (407)
Q Consensus 79 --~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.+.
T Consensus 97 G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 97 GTSGFSEEVLYYTSGC 112 (118)
T ss_dssp CBCCCCCCEEEECSCC
T ss_pred CCCCCccCEEEEcCCC
Confidence 24567777888754
No 106
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.69 E-value=0.075 Score=40.20 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=48.7
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
.|.+.+...+++.|+|.-+... ....|+|..... ....+ .. ..-...++|+||+|+|.|.++|..-
T Consensus 13 ~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~-~~~~~-----~~------~~~~ts~~l~~L~p~t~Y~~~V~A~~ 80 (105)
T 2cum_A 13 DLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGG-QTQEI-----LL------PGGITSHQLLGLFPSTSYNARLQAMW 80 (105)
T ss_dssp EEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTS-CEEEE-----EE------CSSCSEEEECSCCTTCEEEEEEEEEB
T ss_pred ceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCC-ceEEE-----EE------CCCccEEEECCCCCCCEEEEEEEEEe
Confidence 3556666788999999876432 234677776543 11111 00 1123467899999999999999652
Q ss_pred --C--ceeeEEEEcCCC
Q 040421 80 --N--ATRQFSFTTPPG 92 (407)
Q Consensus 80 --~--~s~~~~F~T~p~ 92 (407)
+ ......|+|...
T Consensus 81 ~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 81 GQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp TTBCCCCEEEEEECCCS
T ss_pred CCcccCCEEEEEEeCCc
Confidence 1 234567888643
No 107
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=95.67 E-value=0.022 Score=42.97 Aligned_cols=65 Identities=15% Similarity=0.130 Sum_probs=41.0
Q ss_pred eeccCCCCCcEEEEEEcCCC---CCCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDE---PGSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~---~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.++++|.|..+.. ...-.|+|....... ..... .. .-...++|+||+|+|.|.++|..
T Consensus 11 l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~~-----v~------~~~t~~~l~~L~p~t~Y~~~V~A 79 (101)
T 3k2m_C 11 LEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFT-----VP------YSSSTATISGLSPGVDYTITVYA 79 (101)
T ss_dssp EEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred eEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccEEEE-----cC------CCccEEEECCCCCCCEEEEEEEE
Confidence 44445567899999998641 123467888765321 11111 11 11246789999999999999865
No 108
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.63 E-value=0.12 Score=39.70 Aligned_cols=79 Identities=18% Similarity=0.213 Sum_probs=48.3
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
.|.......+++.|.|.-+... ....|.|...... .... ... .-...++|+||+|+|.|.++|..-
T Consensus 13 ~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~-~~~~-----~v~------~~~t~~~l~~L~P~t~Y~~~V~A~~ 80 (115)
T 2cuh_A 13 QLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAP-PLQA-----ETP------GSAVDYPLHDLVLHTNYTATVRGLR 80 (115)
T ss_dssp EEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSC-CEEE-----EEE------TTCSEEEECSCCSSSEEEEEEEEEE
T ss_pred ceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCC-cEEE-----EEC------CCccEEEEeCCCCCCEEEEEEEEEe
Confidence 3556666788999999876432 2346777664321 1111 111 112357899999999999999652
Q ss_pred ----CceeeEEEEcCCC
Q 040421 80 ----NATRQFSFTTPPG 92 (407)
Q Consensus 80 ----~~s~~~~F~T~p~ 92 (407)
.......|+|.+.
T Consensus 81 ~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 81 GPNLTSPASITFTTGLE 97 (115)
T ss_dssp TTEECCCEEEEEESCCC
T ss_pred CCCcCCCEEEEEEeCCC
Confidence 1223457888754
No 109
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=95.37 E-value=0.03 Score=43.55 Aligned_cols=65 Identities=18% Similarity=0.155 Sum_probs=39.5
Q ss_pred ccCCCCCcEEEEEEcCCCC----CCCEEEEeecC-CCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 5 QGDHEGKGVIVSWVTPDEP----GSNTVLYWAEN-STLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+.....++++|.|.-.... ....|+|.... +..+..+.... ..-...++|++|+|++.|.|||..
T Consensus 26 ~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~---------~~~~~~~~v~~L~p~t~Y~frV~A 95 (121)
T 1x4z_A 26 ISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAI---------PPSRLSVEITGLEKGISYKFRVRA 95 (121)
T ss_dssp EEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEE---------CTTCCEEEEESCCTTCEEEEEEEE
T ss_pred EEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeeccc---------CCCcCEEEECCCCCCCEEEEEEEE
Confidence 3344568999999943321 23467777754 23333222110 112345678999999999999965
No 110
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=95.36 E-value=0.02 Score=42.88 Aligned_cols=66 Identities=20% Similarity=0.206 Sum_probs=43.2
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCc-eEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLK-QQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.|.+.+.++++++|.|...... ....|+|.+...... .... . ++-...++|+||+|||.|.-+|..
T Consensus 11 ~l~vt~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~~~~-----v------~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 11 SESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLD-----L------PSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp TTSCCCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCCEEEE-----E------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEEEEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcceEEE-----C------CCCccEEEECCCCCCCEEEEEEEE
Confidence 3556677889999999987532 356788888654211 1111 0 112345789999999999877754
No 111
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=95.32 E-value=0.089 Score=45.91 Aligned_cols=78 Identities=14% Similarity=0.190 Sum_probs=48.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
|......+++++|.|.-.... ..-.|+|....+......... .....++|++|+|+|.|.++|..
T Consensus 12 l~~~~~~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~V~A~n~ 80 (234)
T 3f7q_A 12 PNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEMKVCAYGA 80 (234)
T ss_dssp EEEEECSSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEEEEEEEET
T ss_pred eEEEEcCCCEEEEEEECCCCccceEEEEEEECCCCccceEEEc-----------CCccEEEECCCCCCCEEEEEEEEEeC
Confidence 444455678999999986422 235677776554322111111 11234678999999999999954
Q ss_pred ---CCceeeEEEEcCC
Q 040421 79 ---GNATRQFSFTTPP 91 (407)
Q Consensus 79 ---~~~s~~~~F~T~p 91 (407)
+.+|....|+|..
T Consensus 81 ~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 81 QGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp TEECCCCCCEEEECCC
T ss_pred CCcCCCCCeEEEEcCC
Confidence 2356667888864
No 112
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=95.29 E-value=0.06 Score=45.05 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=45.8
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......+++.|.|.-.... ..-.|+|............ .. .-...++|+||+|+|.|.++|..-
T Consensus 101 l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V~A~~~ 169 (186)
T 1qr4_A 101 ISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----VD------GSKTRTKLVKLVPGVDYNVNIISVKG 169 (186)
T ss_dssp EEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----EE------TTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred cEEEEeCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEEE-----cC------CCcCEEEEcCCCCCCEEEEEEEEEcC
Confidence 334445668999999876432 2356777765532221111 10 112457789999999999999652
Q ss_pred -Cc--eeeEEEEcCCC
Q 040421 80 -NA--TRQFSFTTPPG 92 (407)
Q Consensus 80 -~~--s~~~~F~T~p~ 92 (407)
+. .....|+|.|.
T Consensus 170 ~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 170 FEESEPISGILKTALD 185 (186)
T ss_dssp TEECCCEEEEEEC---
T ss_pred CCcCcCEEEEEEecCC
Confidence 22 23457778763
No 113
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=95.29 E-value=0.015 Score=44.09 Aligned_cols=66 Identities=15% Similarity=0.080 Sum_probs=40.5
Q ss_pred eeccCCCCCcEEEEEEcCCC----CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDE----PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.++++|.|.-+.. ...-.|+|.......... ... .. .-...++|+||+|+|.|..+|..
T Consensus 14 l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~-~~~---v~------~~~ts~~l~~L~p~t~Y~~~V~A 83 (103)
T 3t04_D 14 LEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ-EFT---VP------GYYSTATISGLKPGVDYTITVYA 83 (103)
T ss_dssp CEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE-EEE---EE------TTCCEEEECSCCTTCCEEEEEEE
T ss_pred eEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE-EEE---cC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 33444567899999988752 123478888764321111 001 10 11345789999999999999854
No 114
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.28 E-value=0.065 Score=41.84 Aligned_cols=82 Identities=10% Similarity=-0.001 Sum_probs=46.8
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeec---CCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAE---NSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
|.+.....++++|.|.-..... ...|+|... ....+..+... . .......++|.+|+|+|.|.+|
T Consensus 24 l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~----~----~~~~~~~~~v~~L~p~t~Y~fr 95 (124)
T 1wis_A 24 LGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL----S----NEPDARSMEVPDLNPFTCYSFR 95 (124)
T ss_dssp EEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE----E----SCTTCSEEEECSCCTTSEECCC
T ss_pred CEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE----c----cCCCceEEEeCCCCCCCEEEEE
Confidence 4445556789999996543222 246777662 22233222111 0 0111235788999999999999
Q ss_pred eCcC------Cceee-EEEEcCCC
Q 040421 76 VGVG------NATRQ-FSFTTPPG 92 (407)
Q Consensus 76 v~~~------~~s~~-~~F~T~p~ 92 (407)
|..- ..|.. ..++|.+.
T Consensus 96 V~A~N~~G~s~~S~~~~~~~T~~~ 119 (124)
T 1wis_A 96 MRQVNIVGTSPPSQPSRKIQTLQS 119 (124)
T ss_dssp CEEECSSCBCCCCCCCCCEECCCS
T ss_pred EEEEECCccCCCcCCccceEcCCC
Confidence 9642 23332 35777654
No 115
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.16 E-value=0.022 Score=43.41 Aligned_cols=66 Identities=23% Similarity=0.228 Sum_probs=39.2
Q ss_pred eeccCCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|.+.....++++|.|.-+.... ...|+|.......+..+. .........+|++|+|++.|.|||.
T Consensus 14 l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~----------~~~~~~~~~~v~~L~p~t~Y~frV~ 83 (110)
T 2yuw_A 14 LTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVAN----------KDLIDKTKFTITGLPTDAKIFVRVK 83 (110)
T ss_dssp EEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECC----------SSCCCSSEEEECSCCTTCEEEEEEE
T ss_pred cEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEec----------cccCccCEEEECCCCCCCEEEEEEE
Confidence 3444445689999999764321 134566655432222110 0011223567899999999999996
Q ss_pred c
Q 040421 78 V 78 (407)
Q Consensus 78 ~ 78 (407)
.
T Consensus 84 A 84 (110)
T 2yuw_A 84 A 84 (110)
T ss_dssp E
T ss_pred E
Confidence 5
No 116
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.11 E-value=0.023 Score=44.13 Aligned_cols=72 Identities=11% Similarity=0.108 Sum_probs=43.8
Q ss_pred CCCcEEEEEEcCCCC-----CCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 9 EGKGVIVSWVTPDEP-----GSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
..+++.|.|..+... ....|+|...... .+..+. . . .....+|++|+|+|.|.|||..
T Consensus 31 ~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~-~---------~--~~~~~~v~~L~p~t~Y~frV~A~n~~ 98 (120)
T 2crm_A 31 HSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY-S---------G--ATREHLCDRLNPGCFYRLRVYCISDG 98 (120)
T ss_dssp ETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE-C---------S--SCSEEEECSCCTTSCEEEEEEEEETT
T ss_pred CCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE-e---------c--cccEEEECCCCCCCEEEEEEEEEcCC
Confidence 457899999876432 2245666665431 232221 0 0 1224678999999999999964
Q ss_pred --CCceeeEEEEcCCC
Q 040421 79 --GNATRQFSFTTPPG 92 (407)
Q Consensus 79 --~~~s~~~~F~T~p~ 92 (407)
+.+|....++|.+.
T Consensus 99 G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 99 GQSAVSESLLVQTPAV 114 (120)
T ss_dssp EECCCCCCCCCCCCCC
T ss_pred ccCCCcccEEEEcCCC
Confidence 23566666777643
No 117
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=95.08 E-value=0.12 Score=39.96 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=36.9
Q ss_pred CCCCcEEEEEEcCCCCCCC----EEEEeec-CCCCceEEEEEEEEEEec--CCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 8 HEGKGVIVSWVTPDEPGSN----TVLYWAE-NSTLKQQAHGIVLTYNYF--NYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~~~----~v~y~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
...++++|.|.-+...+.. .|+|... .+..+..+.... .+... .....-...++|++|+|+|.|.+||..
T Consensus 14 ~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 14 LSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNI-PYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp CC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEE-ECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred EeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccc-cccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence 3568999999987544433 5666665 222343332111 10000 001123346789999999999999965
No 118
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=95.07 E-value=0.086 Score=38.27 Aligned_cols=61 Identities=23% Similarity=0.328 Sum_probs=35.3
Q ss_pred eeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+++.|.|..... ......|....+. . .. +.. . . -..++++|+||+.|+|+|..
T Consensus 10 l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~-~~-~~~------~-~----~~~~~~~L~~~t~Y~~~V~A 70 (88)
T 1k85_A 10 LASTAQTTSSITLSWTASTD-NVGVTGYDVYNGT-A-LA-TTV------T-G----TTATISGLAADTSYTFTVKA 70 (88)
T ss_dssp EEEEEECSSCEEEEEECCSC-CSSEEEEEEEESS-S-EE-EEE------S-S----SEEEECCCCSSCEEEEEEEE
T ss_pred cEEEeccCCEEEEEECCCCC-CCCccEEEEEECC-E-EE-eec------C-C----CEEEeCCCCCCCEEEEEEEE
Confidence 33444456899999988642 2234444432111 1 11 111 0 1 13568999999999999965
No 119
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.03 E-value=0.069 Score=40.69 Aligned_cols=69 Identities=19% Similarity=0.122 Sum_probs=43.9
Q ss_pred CCCcEEEEEEcCCC---C----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 9 EGKGVIVSWVTPDE---P----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 9 ~~~~~~v~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
..+++.|.|..+.. + -...|+|....+..+..+... . ...+.|.+|+|||.|..||...
T Consensus 22 ~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~----------~--~~~~~l~~L~p~t~Y~~~VRa~~~ 89 (109)
T 1uc6_A 22 NPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS----------N--GTAHTITDAYAGKEYIIQVAAKDN 89 (109)
T ss_dssp CTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEES----------S--CSEEEETTCCSSSCEEEEEECCBS
T ss_pred CCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecc----------c--CCEEEEeCCCCCCEEEEEEEEEeC
Confidence 35799999998753 1 245788888765433222110 0 1246789999999999999652
Q ss_pred ------CceeeEEEEc
Q 040421 80 ------NATRQFSFTT 89 (407)
Q Consensus 80 ------~~s~~~~F~T 89 (407)
.||....++|
T Consensus 90 g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 90 EIGTWSDWSVAAHATP 105 (109)
T ss_dssp SSCCCCCCCEEEEECC
T ss_pred CCCCcCcCCCCeeeee
Confidence 3555555544
No 120
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.00 E-value=0.081 Score=41.23 Aligned_cols=34 Identities=9% Similarity=0.104 Sum_probs=27.6
Q ss_pred EEEEcCCCCCCEEEEEeCc------CCceeeEEEEcCCCC
Q 040421 60 HCTIEDLEFDTKYYYEVGV------GNATRQFSFTTPPGV 93 (407)
Q Consensus 60 ~~~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p~~ 93 (407)
.++|++|+|+|.|.+||.. +.+|....|+|++..
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 5678999999999999953 357888899997653
No 121
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=94.97 E-value=0.035 Score=41.35 Aligned_cols=65 Identities=14% Similarity=0.154 Sum_probs=40.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.+++.|.|..+... ....|+|....... ..... .. .-...++|+||+|+|.|..+|..
T Consensus 11 l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~-----v~------~~~t~~~l~~L~p~t~Y~v~V~A 77 (97)
T 3qht_C 11 LEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFT-----VP------GSSSTATISGLSPGVDYTITVYA 77 (97)
T ss_dssp CEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred eEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEEE-----eC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 334445678999999876422 23567787765421 11111 11 11345789999999999999965
No 122
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=94.96 E-value=0.057 Score=41.75 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=41.6
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.+++.|.|..+... ....|+|....... .... ... .-...++|+||+|+|.|..+|..
T Consensus 10 L~v~~~t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~-----~v~------~~~ts~~l~gL~P~T~Y~v~V~A 76 (114)
T 3qwq_B 10 LEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPVQEF-----TVP------GPVHTATISGLKPGVDYTITVYA 76 (114)
T ss_dssp EEEEEEETTEEEEEEECCSCCCSEEEEEEEESSCSSCCEEE-----EEE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred eEEEecCCCEEEEEEcCCcCcccEEEEEEEECCCCCccEEE-----EeC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 444455678999999986432 34578888765421 1111 111 11235789999999999999854
No 123
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.94 E-value=0.032 Score=42.83 Aligned_cols=79 Identities=11% Similarity=0.075 Sum_probs=47.0
Q ss_pred eeccCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.. ..++++|.|.-+... ..-.|+|.. .+..+..+... +. .-...++|.+|.|++.|.+||..
T Consensus 14 l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~~---~~------~~~t~~~v~~L~pg~~Y~FRV~A 82 (108)
T 1v5j_A 14 LVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDPA---VA------GTETELLVPGLIKDVLYEFRLVA 82 (108)
T ss_dssp EEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEEE---EC------SSCCEEECCCCCTTSCEECCBEE
T ss_pred eEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeeee---cC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 34433 457899999988542 234678887 33334433221 11 11234668999999999999965
Q ss_pred C------CceeeEEEEcCCC
Q 040421 79 G------NATRQFSFTTPPG 92 (407)
Q Consensus 79 ~------~~s~~~~F~T~p~ 92 (407)
- ..|....++|...
T Consensus 83 ~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 83 FAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EETTEEEEECSCCCCCCSSC
T ss_pred EcCCCCcCCCCCEEEEeCCc
Confidence 2 2345555555543
No 124
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.90 E-value=0.023 Score=43.75 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=36.3
Q ss_pred CCCCCcEEEEEEcCCCCC----CCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 7 DHEGKGVIVSWVTPDEPG----SNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
....++++|.|....... ...|+|..... ..+..+... .....++|++|+|++.|.|||..
T Consensus 26 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~frV~A 91 (117)
T 1uem_A 26 DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANH-----------VKTTLYTVRGLRPNTIYLFMVRA 91 (117)
T ss_dssp EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEE-----------ECSSEEEECSCCTTCEEEEEEEE
T ss_pred EecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcccc-----------cCcCEEEECCCCCCCEEEEEEEE
Confidence 345678999998764221 24566665431 111111100 01224688999999999999965
No 125
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.86 E-value=0.022 Score=44.40 Aligned_cols=79 Identities=25% Similarity=0.376 Sum_probs=45.5
Q ss_pred CCCCcEEEEEEcCCC------CCCCEEEEeecCCCCc---eEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 8 HEGKGVIVSWVTPDE------PGSNTVLYWAENSTLK---QQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..++++.|.|.-... .....|.|........ .........+. .-...++|++|+|+|.|.++|..
T Consensus 26 ~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~L~p~t~Y~~~V~A 99 (125)
T 1uen_A 26 VNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ------GSKTHGMLPGLEPFSHYTLNVRV 99 (125)
T ss_dssp EETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE------SSCSEEEEESCCSSCEEEEEEEE
T ss_pred cCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEec------CCccEEEeCCCCCCCEEEEEEEE
Confidence 345789999987631 1124566665543221 00000111111 11346789999999999999954
Q ss_pred ------CCceeeEEEEcCCC
Q 040421 79 ------GNATRQFSFTTPPG 92 (407)
Q Consensus 79 ------~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.+.
T Consensus 100 ~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 100 VNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp EESSCEEEECCCEEEECCCC
T ss_pred ecCCCCCCCCCCEEEECCCC
Confidence 23567778888754
No 126
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.86 E-value=0.016 Score=44.33 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=39.8
Q ss_pred eeccCCCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|.+.....++++|.|.-.... ....|+|.......+..+. ........++|++|+|++.|.|||.
T Consensus 15 l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~----------~~~~~~~~~~v~~L~p~t~Y~frV~ 84 (111)
T 1x5y_A 15 LTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN----------KEPVERCGFTVKDLPTGARILFRVV 84 (111)
T ss_dssp EEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS----------SSCBSSSEEEEECCCTTCCEEEEEE
T ss_pred CEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEcc----------ccCCcccEEEECCCCCCCEEEEEEE
Confidence 444445678999999976432 2245666665433222110 0011133567899999999999997
Q ss_pred c
Q 040421 78 V 78 (407)
Q Consensus 78 ~ 78 (407)
.
T Consensus 85 A 85 (111)
T 1x5y_A 85 G 85 (111)
T ss_dssp E
T ss_pred E
Confidence 5
No 127
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=94.85 E-value=0.077 Score=41.45 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=40.4
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.....+.+++.|.|.-+... ..-.|.|........... -. .. .-...++|+||+|+|.|.++|..
T Consensus 35 l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~~-~~---v~------~~~t~~~l~gL~P~t~Y~~~V~A 101 (121)
T 2ocf_D 35 LEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQE-FT---VP------GSKSTATISGLKPGVDYTITVYA 101 (121)
T ss_dssp EEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBEE-EE---EE------TTCCEEEECCCCTTCEEEEEEEE
T ss_pred cEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccEE-EE---eC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 344445678999999876422 235677877654221100 00 01 11236789999999999999965
No 128
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.77 E-value=0.037 Score=40.80 Aligned_cols=66 Identities=12% Similarity=0.219 Sum_probs=39.9
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.....+.+++.|+|.-+... ..-.|+|....... ...... ...-...++|+||+|||.|.++|..
T Consensus 8 l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~~-------~~~~~~---~~~~~~~~~l~~L~p~t~Y~~~V~A 74 (94)
T 1j8k_A 8 LAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGI-------HELFPA---PDGEEDTAELQGLRPGSEYTVSVVA 74 (94)
T ss_dssp CEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEE-------EEECCC---CCSSCCEEEECSCCCCSEEEEEEEE
T ss_pred cEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCCC-------ceEEec---CCCCccEEEeCCCCCCCEEEEEEEE
Confidence 344445568999999765422 23567787654310 000000 0112346789999999999999965
No 129
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.70 E-value=0.14 Score=39.86 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=43.6
Q ss_pred eeccCCCCCcEEEEEEcCCCCCC----CEEEEeecCC--CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGS----NTVLYWAENS--TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......++++|.|.-...... ..|+|..... ..+.... . .. ... .. .|.+|+|+|.|.+||
T Consensus 23 ~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~-~---~~----~~~-~~--~i~~L~p~t~Y~frV 91 (127)
T 1uey_A 23 LELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT-E---VS----GTQ-TT--AQLNLSPYVNYSFRV 91 (127)
T ss_dssp EEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE-E---EE----SSC-CE--EEECCCTTCEECCEE
T ss_pred cEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEe-e---eC----CCc-eE--EEecCCCCCEEEEEE
Confidence 34444567899999996533222 3455655432 1222211 1 11 011 11 356999999999999
Q ss_pred Cc------CCceee-EEEEcCCC
Q 040421 77 GV------GNATRQ-FSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~-~~F~T~p~ 92 (407)
.. +.+|.. ..|+|.+.
T Consensus 92 ~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 92 MAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp EEEESSCBCCCCSCCCCEECCCS
T ss_pred EEEeCCccCCccccccceEcCCC
Confidence 64 234444 46777653
No 130
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.69 E-value=0.027 Score=43.44 Aligned_cols=60 Identities=18% Similarity=0.133 Sum_probs=38.1
Q ss_pred CCCcEEEEEEcCCC-----CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 9 EGKGVIVSWVTPDE-----PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..++++|.|..+.. .....|+|...++..+..+.. .......++|+||+|+|.|.|||..
T Consensus 23 ~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t~Y~frV~A 87 (112)
T 1bpv_A 23 TRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTEDAAYEFRVIA 87 (112)
T ss_dssp ETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCSSCCEEEEEEE
T ss_pred eCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeec----------ccCccCEEEECCCCCCCEEEEEEEE
Confidence 56899999995421 234678888765433332210 0011124678999999999999965
No 131
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.67 E-value=0.084 Score=40.64 Aligned_cols=66 Identities=21% Similarity=0.269 Sum_probs=39.4
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+++.|.|.-..... ...|+|............ . . ......++|++|+|+|.|.+||..
T Consensus 24 l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~---~------~~~~~~~~i~~L~p~t~Y~~~V~A 93 (119)
T 1wfn_A 24 LSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH-Y---L------PNVTLEYRVTGLTALTTYTIEVAA 93 (119)
T ss_dssp CEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE-E---E------CSSCCEEEEESCCTTCEEEEEEEE
T ss_pred eEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEE-E---e------CCCceEEEEcCCCCCCEEEEEEEE
Confidence 3444556789999998764322 245666655432111000 0 0 112345788999999999999964
No 132
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=94.63 E-value=0.055 Score=46.12 Aligned_cols=63 Identities=16% Similarity=0.101 Sum_probs=38.3
Q ss_pred cCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
...+.+++.|+|..+... ....|.|.+......... -.+ . .-...++|+||+|+|.|.++|..
T Consensus 113 ~~~t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~-~~v---~------~~~t~~~l~gL~p~t~Y~~~V~A 176 (195)
T 2qbw_A 113 VAATPTSLLISWDASYYGVSYYRITYGETGGNSPVQE-FTV---P------YSSSTATISGLKPGVDYTITVYA 176 (195)
T ss_dssp EEEETTEEEEECCCCCSSCSEEEEEEEETTCCSCCEE-EEE---E------TTCSEEEECSCCTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEeCCCCCccEEEEEEEECCCCCcceE-EEe---C------CCCCEEEeCCCCCCCEEEEEEEE
Confidence 334567899999776422 234677876543221110 011 0 11245789999999999999964
No 133
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=94.56 E-value=0.16 Score=43.25 Aligned_cols=74 Identities=16% Similarity=0.114 Sum_probs=44.6
Q ss_pred cEEEEEEcCCC-----CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------CC
Q 040421 12 GVIVSWVTPDE-----PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------GN 80 (407)
Q Consensus 12 ~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------~~ 80 (407)
+++|.|..+.. ...-.|+|.......+....-.. .........+|++|+|+|.|.|||.. +.
T Consensus 23 s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~ 95 (209)
T 2vkw_A 23 TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA-------KEASMEGIVTIVGLKPETTYAVRLAALNGKGLGE 95 (209)
T ss_dssp CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEH-------HHHHHHSEEEECCCCTTCEEEEEEEEEETTEECC
T ss_pred eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeec-------cCCCccceEEeCCCCCCCeEEEEEEEEcCCcccC
Confidence 68999998731 22345777766543332221100 00011235778999999999999954 23
Q ss_pred ceeeEEEEcCCC
Q 040421 81 ATRQFSFTTPPG 92 (407)
Q Consensus 81 ~s~~~~F~T~p~ 92 (407)
+|....|+|.+.
T Consensus 96 ~s~~~~~~T~~~ 107 (209)
T 2vkw_A 96 ISAASEFKTQPV 107 (209)
T ss_dssp CCCCEEEECCCS
T ss_pred CcccccccccCC
Confidence 556667888754
No 134
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=94.33 E-value=0.22 Score=44.77 Aligned_cols=89 Identities=16% Similarity=0.085 Sum_probs=51.0
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......+++.|.|...... ..-.|+|............ .. ..-...+.|++|+|++.|.++|..-
T Consensus 27 l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 96 (290)
T 3r8q_A 27 LKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NL------APDSSSVVVSGLMVATKYEVSVYALKD 96 (290)
T ss_dssp EEEEEECSSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----EE------CTTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----Ec------CCCccEEEeCCCCCCCEEEEEEEEEeC
Confidence 344444678999999987532 3356777775532221111 00 0113457889999999999999642
Q ss_pred ----CceeeEEEEcCCCCCCCCCcEEE
Q 040421 80 ----NATRQFSFTTPPGVGPDVPYTFG 102 (407)
Q Consensus 80 ----~~s~~~~F~T~p~~~~~~~~~f~ 102 (407)
..+ ...++|.+.+.....+++.
T Consensus 97 ~g~s~~s-~~~~~t~~~~~~P~~l~~~ 122 (290)
T 3r8q_A 97 TLTSRPA-QGVVTTLENVSPPRRARVT 122 (290)
T ss_dssp TEECCCE-EEEEECCCCCCCCEEEEEE
T ss_pred CCCCCCc-ceeEecCCCCCCCceeEEE
Confidence 122 3467776543322334444
No 135
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.20 E-value=0.063 Score=41.42 Aligned_cols=65 Identities=14% Similarity=0.149 Sum_probs=38.3
Q ss_pred eccCCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 4 TQGDHEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.......++++|.|.-...... ..|+|.... ..+..... ........++|++|+|++.|.|||..
T Consensus 27 ~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~---------~~~~~~~~~~v~~L~p~t~Y~frV~A 95 (121)
T 1wf5_A 27 TLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLA---------SVDPKATSVTVKGLVPARSYQFRLCA 95 (121)
T ss_dssp EECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEES---------SCCTTCCEEEEESCCTTCEEEEEEEE
T ss_pred eeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEc---------ccCCCccEEEECCcCCCCEEEEEEEE
Confidence 3445567899999987643332 345555543 12221100 01112335788999999999999965
No 136
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=94.08 E-value=0.17 Score=43.20 Aligned_cols=70 Identities=13% Similarity=0.087 Sum_probs=46.3
Q ss_pred CCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 10 GKGVIVSWVTPDEPG--------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
.+++.|.|..+.... .-.|+|....+..+.... . .......|.+|+|+|.|..||..
T Consensus 120 ~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~------~------~~~~~~~l~~L~p~t~Y~v~Vra~~~ 187 (210)
T 3n06_B 120 KPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------A------GQQTEFKILSLHPGQKYLVQVRCKPD 187 (210)
T ss_dssp CCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEE------E------ETCSEEEECCCCTTCEEEEEEEEEES
T ss_pred CceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEe------c------cCceEEEEeccCCCCEEEEEEEEecC
Confidence 578999999875322 235677776543332211 0 01235678999999999999953
Q ss_pred ----CCceeeEEEEcCC
Q 040421 79 ----GNATRQFSFTTPP 91 (407)
Q Consensus 79 ----~~~s~~~~F~T~p 91 (407)
+.||....|+|+.
T Consensus 188 ~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 188 HGYWSAWSPATFIQIPS 204 (210)
T ss_dssp SSCCCCCCCCEEEECCT
T ss_pred CCcccCCCCceeEECcC
Confidence 2578889999963
No 137
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=94.05 E-value=0.055 Score=46.42 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=45.9
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
..+++.|.|..+.... .-.|+|....+..+..+.. . ........++|++|+|+|.|.+||..
T Consensus 118 ~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~-------~-~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~ 189 (215)
T 1bqu_A 118 LSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP-------E-DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGK 189 (215)
T ss_dssp CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG-------G-GGCSCCSEEEECSCCSSEEEEEEEEEEETTSC
T ss_pred CCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEecc-------c-cccCccceEEeCCCCCCCEEEEEEEEccCCCC
Confidence 5689999999764321 2467777665333321110 0 00112235789999999999999954
Q ss_pred C---CceeeEEEEcCC
Q 040421 79 G---NATRQFSFTTPP 91 (407)
Q Consensus 79 ~---~~s~~~~F~T~p 91 (407)
+ .+|....++|.+
T Consensus 190 g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 190 GYWSDWSEEASGITYE 205 (215)
T ss_dssp SCCCCCCCCEEEEECC
T ss_pred CccCCCCCcccccccc
Confidence 2 256677888865
No 138
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=94.01 E-value=0.049 Score=42.27 Aligned_cols=61 Identities=20% Similarity=0.254 Sum_probs=39.2
Q ss_pred CCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 8 HEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
...++++|.|..+... ..-.|+|.......+..+.. ......++|++|+|++.|.|||..-
T Consensus 29 ~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~-----------~~~~~~~~v~~L~p~t~Y~frV~A~ 94 (120)
T 2yux_A 29 VWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE-----------HYHRTSATITELVIGNEYYFRVFSE 94 (120)
T ss_dssp EETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES-----------SCCSSCCEECCCCSSEEEEEEECCC
T ss_pred ecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee-----------cCCcCEEEECCCCCCCEEEEEEEEe
Confidence 3467899999876422 23567787765444432210 0112245789999999999999763
No 139
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=93.80 E-value=0.2 Score=42.37 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=41.5
Q ss_pred eeeccCCC--CCcEEEEEEcCC--CCCCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 2 HITQGDHE--GKGVIVSWVTPD--EPGSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 2 ~l~~g~~~--~~~~~v~W~t~~--~~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
.|.+.+.. +++++|.|..+. ......|+|...... .+.... +. .-...++|+||+|+|.|.++|
T Consensus 5 ~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V 73 (201)
T 2ha1_A 5 EVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----IP------GHLNSYTIKGLKPGVVYEGQL 73 (201)
T ss_dssp EEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEEE-----EC------TTCCEEEECSCCTTEEEEEEE
T ss_pred eEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEEe-----cC------CCccEEEecCCCCCCEEEEEE
Confidence 35555544 789999999873 123456778765432 222111 11 112357899999999999999
Q ss_pred Cc
Q 040421 77 GV 78 (407)
Q Consensus 77 ~~ 78 (407)
..
T Consensus 74 ~a 75 (201)
T 2ha1_A 74 IS 75 (201)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 140
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=93.79 E-value=0.14 Score=38.74 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=33.4
Q ss_pred CCcEEEEEEcCCCCCCCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEPGSNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+++.|+|..... ......|+.... .....+ +.. .. .. ..+.++|++|++|+|+|..
T Consensus 19 ~~~v~LsW~~~~~-~~~Y~VyR~~~~~~~~~~i-~~~--~~----~t----sy~d~~l~~g~~Y~Y~V~A 76 (103)
T 3mpc_A 19 GNTANLTWNAAPG-ANSYNVKRSTKSGGPYTTI-ATN--IT----ST----NYTDTGVATGTKYYYVVSA 76 (103)
T ss_dssp SCCEEEEEECCTT-CSEEEEEEESSTTCCCEEE-EEE--EC----SS----EEEETTCCTTCCCEEEEEE
T ss_pred CCEEEEEEECCCC-CCEEEEEEecCCCCCcEEE-eec--CC----CC----EEEECCCCCCCEEEEEEEE
Confidence 4689999998654 345555655432 212221 110 00 11 1245899999999999964
No 141
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=93.75 E-value=0.27 Score=41.97 Aligned_cols=73 Identities=8% Similarity=0.064 Sum_probs=47.1
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEe-ecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYW-AENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
..+++.|.|..+...+ .-.|+|. ...+..+..+... . .....+.|.+|+|+|.|..||..
T Consensus 127 ~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~----~------~~~~~~~l~~L~p~t~Y~~~Vra~~~~g 196 (215)
T 1cd9_B 127 QPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL----P------SSKDQFELCGLHQAPVYTLQMRCIRSSL 196 (215)
T ss_dssp CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE----E------SCEEEEEECCCCSCSCEEEEEEEEESSS
T ss_pred CCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEecc----c------CcceEEEEcCCCCCCEEEEEEEeeECCC
Confidence 4678999999874321 3467787 4444333322111 0 12345789999999999999953
Q ss_pred -C---CceeeEEEEcCC
Q 040421 79 -G---NATRQFSFTTPP 91 (407)
Q Consensus 79 -~---~~s~~~~F~T~p 91 (407)
+ .||....|+|+.
T Consensus 197 ~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 197 PGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCCCCCCCCCEEECCCC
T ss_pred CCCCcCCCCccceecCC
Confidence 2 367888888864
No 142
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=93.66 E-value=0.17 Score=42.25 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=40.8
Q ss_pred eeccCCCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|.......++++|.|...... ..-.|+|.......+...... .-...+.|++|+|+|.|.|+|.
T Consensus 12 l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~Y~~~V~ 80 (197)
T 3lpw_A 12 LKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGCSYYFRVL 80 (197)
T ss_dssp EEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTCEEEEEEE
T ss_pred cEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCCEEEEEEE
Confidence 333344568999999986421 234677777654333322211 0123467899999999999996
Q ss_pred c
Q 040421 78 V 78 (407)
Q Consensus 78 ~ 78 (407)
.
T Consensus 81 a 81 (197)
T 3lpw_A 81 A 81 (197)
T ss_dssp E
T ss_pred E
Confidence 4
No 143
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=93.56 E-value=0.12 Score=44.10 Aligned_cols=73 Identities=25% Similarity=0.439 Sum_probs=44.3
Q ss_pred CCcEEEEEEcCCCCC----CCEEEEeecCCCCce-EEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 10 GKGVIVSWVTPDEPG----SNTVLYWAENSTLKQ-QAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
.+++.|.|.-+.... .-.|+|......... ...... . .-...++|++|+|++.|.++|..
T Consensus 121 ~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~---~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 191 (211)
T 3p4l_A 121 PKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPV---V------GNRLTHQIQELTLDTPYYFKIQARNSKGM 191 (211)
T ss_dssp EEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEEEE---E------SSCSEEEECCCCTTCEEEEEEEEEETTEE
T ss_pred CCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEEEe---c------CCeeEEEEcCCCCCCEEEEEEEEEcCCcc
Confidence 578999999764321 246667665443211 011111 0 11335788999999999999954
Q ss_pred CCceeeEEEEcCC
Q 040421 79 GNATRQFSFTTPP 91 (407)
Q Consensus 79 ~~~s~~~~F~T~p 91 (407)
+.+|....|+|..
T Consensus 192 g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 192 GPMSEAVQFRTPK 204 (211)
T ss_dssp CCCCCCEEEECC-
T ss_pred CCCCCCEEccCcc
Confidence 3567777888764
No 144
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=93.55 E-value=0.37 Score=42.99 Aligned_cols=90 Identities=11% Similarity=0.081 Sum_probs=50.0
Q ss_pred cCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---Cc
Q 040421 6 GDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---NA 81 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---~~ 81 (407)
.....++++|.|.-.... ....|+|............-. . ...-...+.|++|+|++.|.++|..- +.
T Consensus 114 ~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~-------~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~ 185 (283)
T 1tdq_A 114 GSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP-------K-GIGPTTKTTLTDLVPGTEYGVGISAVMNSKQ 185 (283)
T ss_dssp EEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE-------C-CSSSEEEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred EecCCCeEEEEecCCCCCccEEEEEEEeCCCCcceEEECC-------C-CCcccceEEEecCCCCCEEEEEEEEEeCCCC
Confidence 334567899999987432 345677776544222111110 0 00114567889999999999999652 22
Q ss_pred e--eeEEEEcCCCCCCCCCcEEEEEe
Q 040421 82 T--RQFSFTTPPGVGPDVPYTFGLIG 105 (407)
Q Consensus 82 s--~~~~F~T~p~~~~~~~~~f~~~g 105 (407)
+ ....+.|.|.+ ...+++...+
T Consensus 186 s~~~~~~~~t~~~~--P~~l~~~~~~ 209 (283)
T 1tdq_A 186 SIPATMNARTELDS--PRDLMVTASS 209 (283)
T ss_dssp CCCEEEEEECCCCC--CEEEEEEEEC
T ss_pred CcceEEEecCCCCC--CCccEEeEec
Confidence 2 23455565542 2344444433
No 145
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=93.51 E-value=0.14 Score=44.08 Aligned_cols=74 Identities=18% Similarity=0.326 Sum_probs=41.5
Q ss_pred eccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----C
Q 040421 4 TQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----G 79 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----~ 79 (407)
...+.++++++++|..+.. ..+.-.|..--+. ... ++.. ... ...+++||+|+|.|.|+|.. |
T Consensus 158 ~At~VT~tSVtLsW~aP~~-~~GI~gY~ly~~g-~~v--~~v~-------~~~--tsyt~~gLk~~TeYsF~V~A~d~~G 224 (238)
T 2w1n_A 158 KASEINKKNVTVTWTEPET-TEGLEGYILYKDG-KKV--AEIG-------KDE--TSYTFKKLNRHTIYNFKIAAKYSNG 224 (238)
T ss_dssp EEEEECSSCEEEEEECCSC-CTTEEEEEEEETT-EEE--EEEE-------TTC--CEEEECSCCTTCEEEEEEEEEETTS
T ss_pred EEEEccCCeEEEEecCCCC-CCCceeEEEEeCC-cee--EEee-------ccc--eEEEecCCCCCCEEEEEEEEEeCCC
Confidence 3344578999999999854 3333334332211 111 1111 001 12467999999999999964 2
Q ss_pred C--ceeeEEEEcC
Q 040421 80 N--ATRQFSFTTP 90 (407)
Q Consensus 80 ~--~s~~~~F~T~ 90 (407)
. ......++|.
T Consensus 225 ~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 225 EVSSKESLTLRTA 237 (238)
T ss_dssp CBCCCEEEEEECC
T ss_pred CccccCcEEEEec
Confidence 1 2355566664
No 146
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=93.48 E-value=0.15 Score=50.82 Aligned_cols=71 Identities=23% Similarity=0.314 Sum_probs=44.5
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
.+++++|.|..+..+. .-.|+|....... ..... .-...++|+||+|+|.|.++|..
T Consensus 453 s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~v~-------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G 519 (536)
T 3fl7_A 453 STTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRR-------------TEGFSVTLDDLAPDTTYLVQVQALTQEG 519 (536)
T ss_dssp CC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEEEE-------------ESSSEEECCSCCSSCEEEEEEEEECC--
T ss_pred cCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEEEc-------------CCCCEEEECCCCCCCEEEEEEEEEcCCc
Confidence 4678999999764322 2467777655431 11111 11234689999999999999954
Q ss_pred -CCceeeEEEEcCCC
Q 040421 79 -GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|++.
T Consensus 520 ~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 520 QGAGSKVHEFQTLSP 534 (536)
T ss_dssp -CEECCCEEEECCC-
T ss_pred ccCCCCCEEEEeCCC
Confidence 24678889999764
No 147
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=93.39 E-value=0.18 Score=47.15 Aligned_cols=67 Identities=15% Similarity=0.196 Sum_probs=41.0
Q ss_pred eeccCCCCC-cEEEEEEcCC--CCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGK-GVIVSWVTPD--EPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~-~~~v~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+ ++.|.|.-.. ....-.|+|............... . .-...+.|++|+|+|.|.++|..
T Consensus 9 l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~---~------~~~~~~~i~~L~p~t~Y~~~V~a 78 (375)
T 3t1w_A 9 LHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVV---H------ADQSSCTFDNLSPGLEYNVSVYT 78 (375)
T ss_dssp EEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEEE---E------TTCCEEEECCCCTTCCEEEEEEE
T ss_pred cEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEEc---C------CCccEEEEcCCcCCCEEEEEEEE
Confidence 344444567 8999999874 233457778775542211111111 0 11345678999999999999965
No 148
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=93.26 E-value=0.19 Score=42.83 Aligned_cols=78 Identities=18% Similarity=0.188 Sum_probs=45.6
Q ss_pred CCcEEEEEEcCCCC-CCC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 10 GKGVIVSWVTPDEP-GSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
..++++.|..+... +.+ .|+|...+...+....-... ....-...+|.+|+|++.|.|||..
T Consensus 126 ~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~-------~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~ 198 (215)
T 3mtr_A 126 SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK-------EASMEGIVTIVGLKPETTYAVRLAALNGKGL 198 (215)
T ss_dssp TTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHH-------HHHHHTEEEEECCCTTCEEEEEEEEEESSCB
T ss_pred cceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccc-------cccccccEEECCCCCCCEEEEEEEEEeCCcc
Confidence 46789999854321 112 46777666543332211100 0001145779999999999999954
Q ss_pred CCceeeEEEEcCCCCC
Q 040421 79 GNATRQFSFTTPPGVG 94 (407)
Q Consensus 79 ~~~s~~~~F~T~p~~~ 94 (407)
+.+|....|+|+|..+
T Consensus 199 s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 199 GEISAASEFKTQPVQG 214 (215)
T ss_dssp CCCCCCEEEECCC---
T ss_pred cCcccceeeEeccccC
Confidence 2457788899988643
No 149
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=93.24 E-value=0.37 Score=39.99 Aligned_cols=78 Identities=13% Similarity=0.167 Sum_probs=46.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......++++|.|.-+... ..-.|+|..... ..... ... .-...+.|++|+|+|.|.++|..-
T Consensus 13 l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~-~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~~~V~a~~~ 80 (186)
T 1qr4_A 13 LEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSG-KKNEM-----EIP------VDSTSFILRGLDAGTEYTISLVAEKG 80 (186)
T ss_dssp EEEESCCSSEEEEEEECCSSCCSEEEEEEECTTC-CEEEE-----EEC------TTCSEEEEESCCSSCEEEEEEEEESS
T ss_pred eEEEecCCCEEEEEEeCCCCCccEEEEEEEeCCC-CeeEE-----ECC------CCCCEEEECCCCCCCEEEEEEEEEcC
Confidence 455566778999999986432 245677764332 11110 110 112246789999999999999652
Q ss_pred -Cce--eeEEEEcCCC
Q 040421 80 -NAT--RQFSFTTPPG 92 (407)
Q Consensus 80 -~~s--~~~~F~T~p~ 92 (407)
+.+ ....++|.|.
T Consensus 81 ~~~s~~~~~~~~t~p~ 96 (186)
T 1qr4_A 81 RHKSKPTTIKGSTVVG 96 (186)
T ss_dssp SCBCCCEEEEEECCCC
T ss_pred CccCCCEEEEEECCCC
Confidence 222 3456777654
No 150
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=93.13 E-value=0.12 Score=47.08 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=47.4
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
.++++.|.|..+.... .-.|+|....+..+..+.. . ....-....+|++|+|+|.|.+||..
T Consensus 214 ~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~-------~-~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~ 285 (303)
T 1i1r_A 214 LSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP-------E-DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGK 285 (303)
T ss_dssp SSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG-------G-GGCSCCSEEEECSCCTTCEEEEEEEEEETTSC
T ss_pred CCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEcc-------c-cCCCceeEEEeCCCCCCCEEEEEEEeccCCCC
Confidence 5689999999874321 2467777765433322110 0 00112235789999999999999953
Q ss_pred C---CceeeEEEEcCC
Q 040421 79 G---NATRQFSFTTPP 91 (407)
Q Consensus 79 ~---~~s~~~~F~T~p 91 (407)
+ .||....|+|+.
T Consensus 286 G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 286 GYWSDWSEEASGITYE 301 (303)
T ss_dssp SCCCCCCCCEEEECCC
T ss_pred CCcCCCCCccceeCCc
Confidence 2 357788898864
No 151
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=93.11 E-value=0.16 Score=47.54 Aligned_cols=74 Identities=20% Similarity=0.341 Sum_probs=42.0
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
..++++|.|.-..... ...|+|.......+.... . . ..-....+|++|+|+|.|.+||..
T Consensus 305 ~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---~------~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~ 374 (389)
T 2jll_A 305 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEK-K---V------QGNKDHIILEHLQWTMGYEVQITAANRLGY 374 (389)
T ss_dssp TTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBCC-E---E------CTTCCEEEECSCCTTCEEEEEEEEEC-CCB
T ss_pred cCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeEe-e---c------cCCcceEEeCCcCCCCEEEEEEEEEcCCcC
Confidence 4678999998653222 245666653322111000 0 0 111234678999999999999964
Q ss_pred CCceeeEEEEcCCCC
Q 040421 79 GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 ~~~s~~~~F~T~p~~ 93 (407)
+..| ...|+|++.+
T Consensus 375 s~~s-~~~~~T~~~P 388 (389)
T 2jll_A 375 SEPT-VYEFSMPPKP 388 (389)
T ss_dssp CCCE-EEEEECCCCC
T ss_pred CCce-eeEecCCCCC
Confidence 2344 3489998764
No 152
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=93.03 E-value=0.39 Score=42.83 Aligned_cols=92 Identities=14% Similarity=0.153 Sum_probs=52.3
Q ss_pred eeccCCCCCcEEEEEEcCC-CCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPD-EPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......++++|.|.-.. ....-.|+|........... ... ......+.|++|+|++.|.++|..-
T Consensus 21 l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 90 (283)
T 1tdq_A 21 ILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTT----FRL------QPPLSQYSVQALRPGSRYEVSISAVRG 90 (283)
T ss_dssp EEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEE----EEE------CTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred EEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcEE----EEe------CCCCCEEEecCCCCCCEEEEEEEEECC
Confidence 3344445689999999875 22345777865432211100 011 1123356889999999999999652
Q ss_pred -C--ceeeEEEEcCCCCCCCCCcEEEEEec
Q 040421 80 -N--ATRQFSFTTPPGVGPDVPYTFGLIGD 106 (407)
Q Consensus 80 -~--~s~~~~F~T~p~~~~~~~~~f~~~gD 106 (407)
+ .+....|.|+|.+ ...+++...++
T Consensus 91 ~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 118 (283)
T 1tdq_A 91 TNESDASSTQFTTEIDA--PKNLRVGSRTA 118 (283)
T ss_dssp TEECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred CCCCCCeeEEEECCCCC--CCceEEEecCC
Confidence 1 2234567786643 23455444333
No 153
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=92.96 E-value=0.28 Score=41.50 Aligned_cols=74 Identities=16% Similarity=0.124 Sum_probs=43.6
Q ss_pred CCCCCcEEEEEEcCC--C----CCCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-
Q 040421 7 DHEGKGVIVSWVTPD--E----PGSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~--~----~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~- 78 (407)
....+++.|.|.... . ...-.|.|....... +.... . ........+|++|+|+|.|.++|..
T Consensus 115 ~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~--~--------~~~~~~~~~i~~L~p~t~Y~~~V~A~ 184 (205)
T 1cfb_A 115 GTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN--I--------FDWRQNNIVIADQPTFVKYLIKVVAI 184 (205)
T ss_dssp CSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE--E--------CCTTCCEEEECSCCSSCEEEEEEEEE
T ss_pred cCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE--e--------cCCCccEEEEcCCCCCcEEEEEEEEE
Confidence 344678999998764 1 123467777665432 21111 0 0011245678999999999999964
Q ss_pred -----CC-ceeeEEEEcC
Q 040421 79 -----GN-ATRQFSFTTP 90 (407)
Q Consensus 79 -----~~-~s~~~~F~T~ 90 (407)
+. .|....++|.
T Consensus 185 n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 185 NDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp ETTEECSSCCCCEEEESS
T ss_pred cCCCcCCCCCCcEEEecC
Confidence 22 2455566664
No 154
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=92.92 E-value=0.14 Score=45.94 Aligned_cols=72 Identities=18% Similarity=0.285 Sum_probs=44.3
Q ss_pred CCCCcEEEEEEcCC-----C-CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 8 HEGKGVIVSWVTPD-----E-PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 8 ~~~~~~~v~W~t~~-----~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
...+++.|.|.-.. . ...-.|.|....+. ..... .. .-....+|++|+|+|.|.++|..-
T Consensus 208 ~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~-~~~~~-----~~------~~~~~~~~~~L~p~t~Y~~~V~A~n~ 275 (290)
T 3l5i_A 208 VGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN-ETAVN-----VD------SSHTEYTLSSLTSDTLYMVRMAAYTD 275 (290)
T ss_dssp ECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC-CEEEE-----EE------TTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred ccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC-eEEEE-----eC------CCceEEEeCCCCCCCEEEEEEEEEeC
Confidence 34578999998321 1 22345777765432 11111 11 112356899999999999999542
Q ss_pred ---CceeeEEEEcCC
Q 040421 80 ---NATRQFSFTTPP 91 (407)
Q Consensus 80 ---~~s~~~~F~T~p 91 (407)
..|....|+|++
T Consensus 276 ~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 276 EGGKDGPEFTFTTPK 290 (290)
T ss_dssp TEEEECCCEEEECCC
T ss_pred CCCCCCCceEeecCC
Confidence 367788999864
No 155
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=92.89 E-value=0.31 Score=41.36 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=37.1
Q ss_pred cCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.....++++|.|..+... ..-.|+|..... .+.... .. ......++|++|+|+|.|.++|..
T Consensus 119 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~-~~---------~~~~~~~~i~~L~p~t~Y~~~V~A 184 (209)
T 2vkw_A 119 MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSS-EWKPEI-RL---------PSGSDHVMLKSLDWNAEYEVYVVA 184 (209)
T ss_dssp ECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTS-CCCCCE-EE---------CTTCCEEEECSCCTTCEEEEEEEE
T ss_pred ccccCCeEEEEEECcccCCCCCceEEEEEECCCC-CCceee-ec---------CCCccEEEecCCCCCCEEEEEEEE
Confidence 344568999999986322 234677776222 221111 10 011234679999999999999964
No 156
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=92.82 E-value=0.26 Score=41.84 Aligned_cols=62 Identities=16% Similarity=0.147 Sum_probs=38.5
Q ss_pred CCCCCcEEEEEEcCCC--CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 7 DHEGKGVIVSWVTPDE--PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
....+++.|.|.-+.. ...-.|+|.......... .. .. ..-...++|+||+|+|.|.++|..
T Consensus 124 ~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~-~~---~~------~~~~~~~~i~~L~p~t~Y~~~V~A 187 (203)
T 2gee_A 124 NIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA-EL---SI------SPSDNAVVLTNLLPGTEYVVSVSS 187 (203)
T ss_dssp EEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCE-EE---EE------CTTCCEEEECSCCTTCEEEEEEEE
T ss_pred EcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccE-EE---Ec------CCCcCEEEECCCCCCCEEEEEEEE
Confidence 3346899999998742 234567777744321111 00 00 112345788999999999999965
No 157
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=92.63 E-value=0.3 Score=43.89 Aligned_cols=87 Identities=18% Similarity=0.085 Sum_probs=49.4
Q ss_pred CCCCCcEEEEEEcCCC-CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---Cce
Q 040421 7 DHEGKGVIVSWVTPDE-PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---NAT 82 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---~~s 82 (407)
....++++|.|..... .....|+|........... ... .....+.|++|+|++.|.++|..- +.+
T Consensus 123 ~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s 191 (290)
T 3r8q_A 123 DATETTITISWRTKTETITGFQVDAVPANGQTPIQR-----TIK------PDVRSYTITGLQPGTDYKIYLYTLNDNARS 191 (290)
T ss_dssp EECSSCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----EEC------TTCSEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred EcCCCeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----ecC------CCccEEEECCCCCCCEEEEEEEEEeCCccc
Confidence 3456789999998753 2345677766553222111 000 112346789999999999999642 222
Q ss_pred --eeEEEEcCCCCCCCCCcEEEEEec
Q 040421 83 --RQFSFTTPPGVGPDVPYTFGLIGD 106 (407)
Q Consensus 83 --~~~~F~T~p~~~~~~~~~f~~~gD 106 (407)
....+.|.|.+ ...+++...++
T Consensus 192 ~~~~~~~~t~p~~--P~~l~~~~~~~ 215 (290)
T 3r8q_A 192 SPVVIDASTAIDA--PSNLRFLATTP 215 (290)
T ss_dssp CCEEEEEECCCCC--CEEEEEEEEET
T ss_pred CCEEEEecCCCCC--CCccEEEeeCC
Confidence 34456666543 23455544433
No 158
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=92.54 E-value=0.33 Score=41.05 Aligned_cols=79 Identities=13% Similarity=0.128 Sum_probs=44.2
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|.+.. ..++++|.|.-..... .-.|+|....+ ..+....... . ... ....+ +|+|+|.|.+||.
T Consensus 12 ~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~---~----~~~--~~~~~-~L~p~t~Y~~~V~ 80 (205)
T 1cfb_A 12 TGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---P----NTD--SSFVV-QMSPWANYTFRVI 80 (205)
T ss_dssp EEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE---E----TTC--SEEEE-ECCSSEEEEEEEE
T ss_pred cEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeecc---C----CCc--eEEEE-eCCCCCEEEEEEE
Confidence 33444 6789999999863222 24677766532 2232222111 1 111 12345 9999999999996
Q ss_pred c------CCce-eeEEEEcCCC
Q 040421 78 V------GNAT-RQFSFTTPPG 92 (407)
Q Consensus 78 ~------~~~s-~~~~F~T~p~ 92 (407)
. +..+ ....++|.+.
T Consensus 81 A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 81 AFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEETTEECCCCCCCCCEEECCC
T ss_pred EEECCccCCCCCCceeEEcCCc
Confidence 4 2334 3456777653
No 159
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=92.51 E-value=0.24 Score=41.25 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=37.8
Q ss_pred CCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 8 HEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
...+++.|.|..+... ..-.|+|...+...+.... .. -....+|++|+|++.|.++|..
T Consensus 114 ~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~-----------~~~~~~~~~L~p~t~Y~~~V~A 177 (197)
T 3lpw_A 114 VTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA-TV-----------KVTEATITGLIQGEEYSFRVSA 177 (197)
T ss_dssp ECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE-EE-----------SSSEEEECCCCTTCEEEEEEEE
T ss_pred ccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee-cc-----------cccEEEeCCcCCCCEEEEEEEE
Confidence 3467899999976432 2246777766543332211 10 1223678999999999999975
No 160
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.15 E-value=0.21 Score=38.34 Aligned_cols=56 Identities=20% Similarity=0.331 Sum_probs=34.5
Q ss_pred CcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 11 KGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 11 ~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
++++|.|.-+.... .-.|+|..... ..... . .. .-....+|++|+|+|.|.++|..
T Consensus 31 ~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~--~---~~------~~~~~~~l~~L~p~t~Y~~~V~A 90 (116)
T 2edb_A 31 NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETV--R---VD------SKQRYYSIERLESSSHYVISLKA 90 (116)
T ss_dssp SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEE--E---EE------TTCCEEEECSCCSSSBEEEEEEE
T ss_pred CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEE--E---eC------CCeeEEEeCCCCCCCEEEEEEEE
Confidence 79999999874331 24666765321 11111 0 00 11235688999999999999964
No 161
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=91.33 E-value=0.085 Score=37.25 Aligned_cols=66 Identities=18% Similarity=0.163 Sum_probs=40.6
Q ss_pred EEEEcC--CCCCCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---C--CceeeEE
Q 040421 15 VSWVTP--DEPGSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---G--NATRQFS 86 (407)
Q Consensus 15 v~W~t~--~~~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---~--~~s~~~~ 86 (407)
|.|..+ .....-.+.|.+++... ++.+. -++..+.-+|.||+||++|.-++.+ . .....+.
T Consensus 2 IqWnap~~shi~~YIL~w~pk~~~~~wKev~-----------IPgh~nSYtIsGLkPGvtYegQLisV~r~g~~Evtrfd 70 (89)
T 1q38_A 2 RGSNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFD 70 (89)
T ss_dssp CCCCCSSCSSCSEEEEEEEETTTTCCCEEEE-----------ECSSSSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEE
T ss_pred ccccCCCcccceeeEEEEEecCCCCccEEEE-----------cCCccceEEEeccCCCcEEEEEEEeeeecccCCceEEE
Confidence 467743 23345678888877643 33222 1233445579999999999877644 2 2346677
Q ss_pred EEcCC
Q 040421 87 FTTPP 91 (407)
Q Consensus 87 F~T~p 91 (407)
|+|..
T Consensus 71 fTT~~ 75 (89)
T 1q38_A 71 FTTTS 75 (89)
T ss_dssp ECSSS
T ss_pred EEecc
Confidence 87753
No 162
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=91.17 E-value=0.35 Score=41.80 Aligned_cols=74 Identities=20% Similarity=0.242 Sum_probs=46.2
Q ss_pred CCcEEEEEEcCCCC------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 10 GKGVIVSWVTPDEP------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
.+++.|+|..+... -...|+|...+.. +..+... .. ......+.|.+|.|||.|..||..
T Consensus 119 ~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~~~--~~------~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~ 189 (214)
T 2b5i_B 119 THRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAPLL--TL------KQKQEWICLETLTPDTQYEFQVRVKPLQG 189 (214)
T ss_dssp SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSCCE--EE------CSCCCEEEECSCCTTCEEEEEEEEEESCC
T ss_pred CCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheeeee--ee------cccceEEEeccCCCCCEEEEEEEEeeCCC
Confidence 35899999987432 1356778776431 1111000 00 012346778999999999999953
Q ss_pred -----CCceeeEEEEcCCC
Q 040421 79 -----GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -----~~~s~~~~F~T~p~ 92 (407)
+.||+...|+|.+.
T Consensus 190 ~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 190 EFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp SSCCCCCCCCCEEEECCC-
T ss_pred CCCCccCCCCCEEEEcCCC
Confidence 15788889999875
No 163
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=91.08 E-value=0.71 Score=42.02 Aligned_cols=73 Identities=10% Similarity=0.009 Sum_probs=47.4
Q ss_pred CCcEEEEEEcCCCCC----CCEEEEe-ecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 10 GKGVIVSWVTPDEPG----SNTVLYW-AENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
.+++.|+|..+...+ ...|+|. ..++..+..+... ......+.|.+|+|+|.|..||..
T Consensus 222 ~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~ 291 (313)
T 2d9q_B 222 AGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPL----------PLEALQYELCGLLPATAYTLQIRCIRWPLP 291 (313)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEE----------CSCEEEEEECSCCSCCCEEEEEEEEECSSC
T ss_pred CCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccc----------cCcceEEEEeCCCCCCeEEEEEEeeECCCC
Confidence 578999999864211 3567787 4444344333211 112456789999999999999953
Q ss_pred C---CceeeEEEEcCCC
Q 040421 79 G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 ~---~~s~~~~F~T~p~ 92 (407)
+ .||....|+|+..
T Consensus 292 G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 292 GHWSDWSPSLELRTTER 308 (313)
T ss_dssp CCCCCCCCCEEECCCC-
T ss_pred CccCCCCCccceeCCcc
Confidence 2 3677788888653
No 164
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=90.81 E-value=0.69 Score=40.28 Aligned_cols=72 Identities=18% Similarity=0.177 Sum_probs=46.0
Q ss_pred CCcEEEEEEcCCCCC------CCEEEEeecC-CCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 10 GKGVIVSWVTPDEPG------SNTVLYWAEN-STLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~------~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
+.++.|.|..+..+. .-.|+|.... ...+..+.. ......+.+.+|+|+|.|..||..
T Consensus 127 ~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~-----------~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~ 195 (223)
T 3up1_A 127 ANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNL-----------SSTKLTLLQRKLQPAAMYEIKVRSIPDH 195 (223)
T ss_dssp TTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEE-----------SSSEEEEEGGGSCTTCEEEEEEEEEECS
T ss_pred CCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEe-----------cCceeEEeccccCCCcEEEEEEEEeeCC
Confidence 357889999874221 3467787764 223332211 011234567899999999999952
Q ss_pred ---C---CceeeEEEEcCCC
Q 040421 79 ---G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 ---~---~~s~~~~F~T~p~ 92 (407)
+ .||....|+|++.
T Consensus 196 ~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 196 YFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp SCCBCCCCCCCCEEEECCCC
T ss_pred CCCCCCCCCCCCeEEECCCC
Confidence 1 4678889999764
No 165
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=90.75 E-value=0.38 Score=40.57 Aligned_cols=65 Identities=20% Similarity=0.176 Sum_probs=38.8
Q ss_pred eccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 4 TQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.......+++.|.|.-+... ..-.|+|.......... ... .. .-...+.|+||+|+|.|.++|..
T Consensus 119 ~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~-~~~---v~------~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 119 SVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ-YLD---LP------STATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp SCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCCE-EEE---EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCcee-EEE---cC------CceeEEEeCCCCCCCEEEEEEEE
Confidence 34444668999999876432 13456676543222111 101 11 11345789999999999999965
No 166
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=90.72 E-value=0.41 Score=44.48 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=39.3
Q ss_pred eccCCCCC-cEEEEEEcCCC--CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 4 TQGDHEGK-GVIVSWVTPDE--PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 4 ~~g~~~~~-~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.......+ +++|.|..... ...-.|+|.............. . ......++|++|+|+|.|.|+|..
T Consensus 9 ~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~------~~~~~~~~i~~L~p~t~Y~~~V~a 77 (368)
T 1fnf_A 9 HLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---V------HADQSSCTFDNLSPGLEYNVSVYT 77 (368)
T ss_dssp EEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---E------CTTCCEEECCCCCTTSCEEEEEEE
T ss_pred EEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEEE---e------cCCcCEEEECCCCCCCEEEEEEEE
Confidence 33333344 69999998642 2345777776554222111111 0 011245789999999999999965
No 167
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.56 E-value=1.6 Score=31.91 Aligned_cols=70 Identities=19% Similarity=0.259 Sum_probs=46.3
Q ss_pred CCCcEEEEEEcCCCC--CCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---Cce
Q 040421 9 EGKGVIVSWVTPDEP--GSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---NAT 82 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~--~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---~~s 82 (407)
.+++-.|.|..+..+ ....+.|+..... .+..+. -+.....-+|+||+||..|.-+|-+- +++
T Consensus 19 ~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~-----------Ip~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~ 87 (98)
T 1oww_A 19 QPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQ 87 (98)
T ss_dssp CTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----------ECSSCCEEEECSCCSSEEEEEEEEEEESSSCE
T ss_pred CCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEE-----------ecCccceEEEecCCCCcEEEEEEEEeeccCcc
Confidence 368899999998643 3456777776543 222221 12356667899999999999888652 343
Q ss_pred e--eEEEEc
Q 040421 83 R--QFSFTT 89 (407)
Q Consensus 83 ~--~~~F~T 89 (407)
+ .+.|.|
T Consensus 88 Evs~f~FtT 96 (98)
T 1oww_A 88 EVTRFDFTT 96 (98)
T ss_dssp EEEEEEEEE
T ss_pred cceEEEEEe
Confidence 2 667776
No 168
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=90.09 E-value=0.18 Score=44.33 Aligned_cols=67 Identities=19% Similarity=0.249 Sum_probs=43.3
Q ss_pred cEEEEEEcCCCC--------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 12 GVIVSWVTPDEP--------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 12 ~~~v~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
++.|.|..+... -.-.|+|....+..+..... .....+.|.+|+|||.|..||..
T Consensus 152 ~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~~------------~~~~~~~l~~L~p~t~Y~vqVRa~~~~g 219 (236)
T 1axi_B 152 DIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP------------ILTTSVPVYSLKVDKEYEVRVRSKQRNS 219 (236)
T ss_dssp EEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC------------BSSSEEEEEEEETTSCEEEEEEEEETTS
T ss_pred eEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEec------------cCCCEEEEeccCCCCEEEEEEEEEECCC
Confidence 499999987532 12467777765433322110 01245678899999999999964
Q ss_pred ---CCceeeEEEEcC
Q 040421 79 ---GNATRQFSFTTP 90 (407)
Q Consensus 79 ---~~~s~~~~F~T~ 90 (407)
+.||....|+|+
T Consensus 220 g~ws~WS~~~~~~~p 234 (236)
T 1axi_B 220 GNYGEFSEVLYVTLP 234 (236)
T ss_dssp SCCCCCCCCEEECCC
T ss_pred CCcCCCCCCEEEECC
Confidence 146777788775
No 169
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=89.88 E-value=1.3 Score=38.29 Aligned_cols=71 Identities=21% Similarity=0.274 Sum_probs=44.7
Q ss_pred CCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 10 GKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
.+++.|.|..+.... .-.|+|....+..+.... . .. . -...+.|.+|+|||.|..||..
T Consensus 136 ~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~-~---~~----~--~~~~~~l~~L~p~t~Y~vqVRa~~~~~~ 205 (227)
T 1eer_B 136 SGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV-E---IL----E--GRTECVLSNLRGRTRYTFAVRARMAEPS 205 (227)
T ss_dssp TTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE-E---EC----T--TCCEEEECCCCSSCEEEEEEEEEECTTT
T ss_pred CCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE-E---Ee----c--CceEEEEcccCCCCeEEEEEEEeECCCC
Confidence 578999999875321 247778765543232111 0 00 0 1235678999999999999853
Q ss_pred -----CCceeeEEEEcC
Q 040421 79 -----GNATRQFSFTTP 90 (407)
Q Consensus 79 -----~~~s~~~~F~T~ 90 (407)
+.||....|+|+
T Consensus 206 ~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 206 FGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp CCEECCCCCCCEEEEC-
T ss_pred CCCcCCCCCCCEEEECc
Confidence 246777888883
No 170
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=89.77 E-value=0.16 Score=44.30 Aligned_cols=80 Identities=21% Similarity=0.252 Sum_probs=44.2
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
...++++|.|.-+.... .-.|+|....+..... +....... ........+|++|+|+|.|.++|..
T Consensus 110 ~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 184 (234)
T 3f7q_A 110 VSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLV---DNPKNRMLLIENLRESQPYRYTVKARNGAG 184 (234)
T ss_dssp CSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECCC---SCTTCCEEEEECCCTTCCEEEEEEEEETTE
T ss_pred ecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEEe---cCCcceEEEeCCCCCCCeEEEEEEEECCCc
Confidence 35678999998764321 2366676654321100 00000000 1112235789999999999999964
Q ss_pred -CCcee-eEEEEcCCC
Q 040421 79 -GNATR-QFSFTTPPG 92 (407)
Q Consensus 79 -~~~s~-~~~F~T~p~ 92 (407)
+..|. ...|+|.+.
T Consensus 185 ~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 185 WGPEREAIINLATQPK 200 (234)
T ss_dssp ECCCEEEEECGGGSCC
T ss_pred cCCCcCceeEeecCCC
Confidence 23444 467777653
No 171
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.38 E-value=0.043 Score=41.55 Aligned_cols=65 Identities=20% Similarity=0.243 Sum_probs=39.8
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.+++.|.|.-.... ....|+|....... ..... ...-...++|+||+|+|.|.++|..
T Consensus 14 l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~~-----------v~~~~~~~~l~~L~p~t~Y~~~V~A 80 (105)
T 2ekj_A 14 LALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEKSVS-----------VPGARSHVTLPDLQAATKYRVLVSA 80 (105)
T ss_dssp EEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCCCBC-----------CBTTSSEEEECSCCSSCCCBCBBCB
T ss_pred eEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCccEEEE-----------eCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 444455678999999987432 23466676644321 10000 0111245789999999999999965
No 172
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=89.23 E-value=1 Score=41.89 Aligned_cols=65 Identities=15% Similarity=0.234 Sum_probs=40.9
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......++++|.|..+... ..-.|+|..... ....... .. .-....+|+||+||+.|.++|..
T Consensus 284 l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V~A 350 (375)
T 3t1w_A 284 IDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDR-----VP------HSRNSITLTNLTPGTEYVVSIVA 350 (375)
T ss_dssp EEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred cEeeeccCCEEEEEECCCCcceeeEEEEEEECCCCCcceeEE-----cC------CCccEEEECCCCCCCEEEEEEEE
Confidence 444455678999999986432 345677777654 2221111 10 11235688999999999999965
No 173
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=89.07 E-value=1.5 Score=33.55 Aligned_cols=69 Identities=17% Similarity=0.290 Sum_probs=42.3
Q ss_pred CCCcEEEEEEcCCC--CC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 9 EGKGVIVSWVTPDE--PG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
..+++.|.|.-... .. .-.|.|............ .+ . ..+.+. |+|+|.|.++|..
T Consensus 30 ~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~--------~~---~--~~~~~~-L~~~t~Y~~~V~A~n~~ 95 (117)
T 1wj3_A 30 TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN--------TN---K--TSAELV-LPIKEDYIIEVKATTDG 95 (117)
T ss_dssp ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE--------ES---S--SEEEEE-CCCSSCEEEEEEEEESS
T ss_pred eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEEe--------CC---C--cEEEEE-CCCCCEEEEEEEEECCC
Confidence 35789999987631 21 235666665443221110 01 1 245666 9999999999953
Q ss_pred --CCceeeEEEEcCC
Q 040421 79 --GNATRQFSFTTPP 91 (407)
Q Consensus 79 --~~~s~~~~F~T~p 91 (407)
+..|....|+|..
T Consensus 96 G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 96 GDGTSSEQIRIPRIT 110 (117)
T ss_dssp CCCCBCCCEEECCCC
T ss_pred ccCCCCCCEEEEcCC
Confidence 3567778888865
No 174
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=88.92 E-value=0.37 Score=46.80 Aligned_cols=63 Identities=14% Similarity=0.114 Sum_probs=39.9
Q ss_pred ccCCCCCcEEEEEEcCCC--CCCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 5 QGDHEGKGVIVSWVTPDE--PGSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
....+.+|++|+|..+.. ...-.|+|.+..... ..... .. .-...++|+||+|||.|..+|..
T Consensus 378 ~~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~v~a 443 (461)
T 3csg_A 378 VVAATPTSLLISWDASYSSSVSYYRITYGETGGNSPVQEFT-----VP------GSKSTATISGLSPGVDYTITVYA 443 (461)
T ss_dssp EEEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSCCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred EeccCCCeEEEEecCCCCCcceEEEEEEEECCCCccceEEE-----ec------CCCceEEecCCCCCCEEEEEEEE
Confidence 334467899999988621 124578887775321 11111 00 11256899999999999999865
No 175
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=88.76 E-value=0.46 Score=40.34 Aligned_cols=69 Identities=17% Similarity=0.284 Sum_probs=37.8
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCC-CCceEEEEEEEEEEec--CCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENS-TLKQQAHGIVLTYNYF--NYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..++++|.|.-..... .-.|+|...+. ..+....... .+... +....-...++|++|+|+|.|.|||..
T Consensus 14 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 89 (214)
T 2ibg_A 14 SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNI-PYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 89 (214)
T ss_dssp ETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCE-ECCSSSCSSSSEEEEEEEECSCCTTCEEEEEEEE
T ss_pred cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCccccccc-CccccccccccCcceeEEecCCcCCCEEEEEEEE
Confidence 4679999999765322 23566666432 1222111100 00000 001123456789999999999999964
No 176
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=88.37 E-value=2.6 Score=38.86 Aligned_cols=92 Identities=13% Similarity=0.085 Sum_probs=50.4
Q ss_pred eeccCCCCCcEEEEEEcCCCCC-CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG-SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......+++.|.|......- .-.|+|........... .. .. ......+|++|+|++.|.++|..-
T Consensus 192 l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-~~---~~------~~~~~~~i~~L~p~t~Y~~~V~A~n~ 261 (368)
T 1fnf_A 192 IDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE-DR---VP------HSRNSITLTNLTPGTEYVVSIVALNG 261 (368)
T ss_dssp EEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEE-EE---EE------TTCCEEEEESCCTTCEEEEEEEEEET
T ss_pred cEEEEccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccE-EE---eC------CCcCEEEECCCCCCCEEEEEEEEEeC
Confidence 3444456789999999864322 35667766543211111 11 11 112346789999999999999652
Q ss_pred -Cce--eeEEEEcCCCCCCCCCcEEEEEec
Q 040421 80 -NAT--RQFSFTTPPGVGPDVPYTFGLIGD 106 (407)
Q Consensus 80 -~~s--~~~~F~T~p~~~~~~~~~f~~~gD 106 (407)
+.+ ....+.|+|.+ ...+++...++
T Consensus 262 ~g~~~~~~~~~~t~p~~--P~~l~~~~~~~ 289 (368)
T 1fnf_A 262 REESPLLIGQQSTVSDV--PRDLEVVAATP 289 (368)
T ss_dssp TEECCCEEEEEECCCCS--CEEEEEEEEET
T ss_pred CccCCcccccccCCCCC--CCeeEEEecCC
Confidence 111 22345666543 13455544443
No 177
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=88.19 E-value=1.4 Score=40.41 Aligned_cols=58 Identities=21% Similarity=0.181 Sum_probs=37.5
Q ss_pred CCcEEEEEEcCCCC------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEP------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
++++.|+|..+... -.-.|+|.......+..+.. . .....++|.+|+|++.|..||..
T Consensus 212 ~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-------~----~~~~~~~l~~L~p~t~Y~~rVrA 275 (325)
T 1n26_A 212 PRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-------K----DLQHHCVIHDAWSGLRHVVQLRA 275 (325)
T ss_dssp TTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-------G----GGCSEEEESSCCTTCCEEEEEEE
T ss_pred CCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-------c----CCceEEEEeCCCCCCeEEEEEEE
Confidence 46899999987531 12367787765444432211 0 11235678999999999999954
No 178
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=87.01 E-value=1.1 Score=37.94 Aligned_cols=70 Identities=19% Similarity=0.224 Sum_probs=43.7
Q ss_pred CCcEEEEEEcCCCC--------------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 10 GKGVIVSWVTPDEP--------------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 10 ~~~~~v~W~t~~~~--------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
.+++.|.|..+..+ -.-.|.|+..++....... . . ...++|.+|+|+|.|..+
T Consensus 105 ~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~------~----~---~~~~~l~~L~p~t~Ycv~ 171 (201)
T 3lqm_A 105 ADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT------P----Q---YDFEVLRNLEPWTTYCVQ 171 (201)
T ss_dssp TTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC------C----S---SSEEEECSCCTTCEEEEE
T ss_pred CCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE------e----c---CceEEEecCCCCCcEEEE
Confidence 46899999886311 1345666665432211110 0 0 124789999999999999
Q ss_pred eCc--------CCceeeEEEEcCCC
Q 040421 76 VGV--------GNATRQFSFTTPPG 92 (407)
Q Consensus 76 v~~--------~~~s~~~~F~T~p~ 92 (407)
|.. +.+|+...|+|.+.
T Consensus 172 V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 172 VRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEEETTTTEECCCCCCEEEECCCG
T ss_pred EEEEeccCCCCCCcCCCEeEEeCCC
Confidence 853 24677788888653
No 179
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=86.66 E-value=0.94 Score=35.14 Aligned_cols=56 Identities=20% Similarity=0.328 Sum_probs=33.8
Q ss_pred CcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 11 KGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 11 ~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
++++|.|.-+.... ...|+|.... ...... .. ..-....+|++|+|+|.|.++|..
T Consensus 41 ~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~~V~A 100 (126)
T 1x5i_A 41 TSIVVSWTPPENQNIVVRGYAIGYGIGS-PHAQTI-----KV------DYKQRYYTIENLDPSSHYVITLKA 100 (126)
T ss_dssp TEEEEEEECCSCTTBCCCEEEEEECSSC-GGGEEE-----EC------CTTCCEEEECSCCSSCEECCEEEE
T ss_pred CEEEEEEcCCCCCCCCEeEEEEEEEcCC-CCceEE-----Ee------CCCeeEEEEeCCCCCCEEEEEEEE
Confidence 78999999875322 2356666321 111110 00 112345688999999999999964
No 180
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=86.60 E-value=2.2 Score=43.69 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=25.2
Q ss_pred EEEEEEcCCCCCCEEEEEeCc------CCceee---EEEEcCCC
Q 040421 58 IHHCTIEDLEFDTKYYYEVGV------GNATRQ---FSFTTPPG 92 (407)
Q Consensus 58 ~~~~~l~gL~p~t~Y~Y~v~~------~~~s~~---~~F~T~p~ 92 (407)
...++|++|+|+|.|.+||.. +..|.. ..++|.+.
T Consensus 333 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 333 QNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred eeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 356789999999999999954 223333 67777654
No 181
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=85.66 E-value=1.6 Score=43.73 Aligned_cols=61 Identities=20% Similarity=0.214 Sum_probs=42.6
Q ss_pred cCCCCCcEEEEEEcCCC-CC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDE-PG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~-~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+.+.++++++|..+.. .+ ...|++...++..|..+. .+ . .. ..+++||.||+.|.+||..
T Consensus 19 ~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~---~----~t----~~~V~~L~~g~~Y~FRV~A 84 (573)
T 3uto_A 19 ENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS---R----YT----YTTIEGLRAGKQYEFRIIA 84 (573)
T ss_dssp EEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE---S----SS----EEEECCCCTTCEEEEEEEE
T ss_pred EEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc---c----CC----EEEeCCCCCCCcEeEEEEE
Confidence 34467899999998742 22 257788888877776553 21 1 11 2578999999999999964
No 182
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=84.67 E-value=4.3 Score=34.96 Aligned_cols=70 Identities=17% Similarity=0.078 Sum_probs=45.6
Q ss_pred CCcEEEEEEcCCCC-----------------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEE
Q 040421 10 GKGVIVSWVTPDEP-----------------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKY 72 (407)
Q Consensus 10 ~~~~~v~W~t~~~~-----------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 72 (407)
.+++.|.|.-+..+ -.-.|.|+..++... .... . . .+.++|.+|+|+|.|
T Consensus 120 ~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~--~~~~---~------~--~~~~~l~~L~p~t~Y 186 (221)
T 4doh_R 120 EKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT--WSQC---V------T--NHTLVLTWLEPNTLY 186 (221)
T ss_dssp SSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE--EEEE---E------C--SSEEEECSCCTTCEE
T ss_pred CCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE--EEEe---e------c--CcEEEEecCCCCCcE
Confidence 46899999976422 124677777654321 1111 0 0 135689999999999
Q ss_pred EEEeCc--------CCceeeEEEEcCCC
Q 040421 73 YYEVGV--------GNATRQFSFTTPPG 92 (407)
Q Consensus 73 ~Y~v~~--------~~~s~~~~F~T~p~ 92 (407)
..+|.. +.+|+...|+|.+.
T Consensus 187 cv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 187 CVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp EEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred EEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 999853 24688888999764
No 183
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=84.25 E-value=8.1 Score=34.92 Aligned_cols=67 Identities=16% Similarity=0.317 Sum_probs=41.0
Q ss_pred CcEEEEEEcCCCCC-----------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-
Q 040421 11 KGVIVSWVTPDEPG-----------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV- 78 (407)
Q Consensus 11 ~~~~v~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~- 78 (407)
+++.|.|. +.... .-.|.|+..++.......+ -...++|.+|+|+|.|..+|..
T Consensus 114 ~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~-------------~~~~~~l~~L~p~t~Y~~~V~A~ 179 (306)
T 3s98_A 114 KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYKLSPETTYCLKVKAA 179 (306)
T ss_dssp SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEEE-------------ECTEEEECSCCTTCEEEEEEEEE
T ss_pred CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEec-------------ccceEEEccCCCCCeEEEEEEEE
Confidence 58999999 43211 1256676665433222111 1135789999999999999853
Q ss_pred -------CCceeeEEEEcCC
Q 040421 79 -------GNATRQFSFTTPP 91 (407)
Q Consensus 79 -------~~~s~~~~F~T~p 91 (407)
+..|+...++|..
T Consensus 180 ~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 180 LLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp EGGGTEECCCCCCEEEECCS
T ss_pred EccCCCCCCCCCcEeeEecC
Confidence 2456777777753
No 184
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=84.19 E-value=5.1 Score=35.42 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=36.3
Q ss_pred CcEEEEEEcCCC-CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 11 KGVIVSWVTPDE-PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 11 ~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+++.|.|.-... .....|+|............ ..... ........+++|+|+|.|.++|..
T Consensus 115 ~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~L~p~t~Y~~~V~A 176 (290)
T 3l5i_A 115 NMLWVEWTTPRESVKKYILEWCVLSDKAPCITD--WQQED-----GTVHRTYLRGNLAESKCYLITVTP 176 (290)
T ss_dssp TEEEEEEECCSSCCCEEEEEEEEECSSSCCCCE--EEEEE-----TTCSEEECCSCCCTTCEEEEEEEE
T ss_pred CeEEEEEeCCCCCCCcEEEEEEECCCCCCCCcC--eEEcc-----CCCcceEEecCcCCccEEEEEEEE
Confidence 689999998754 23456777765543210000 00000 112344667999999999999964
No 185
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=84.14 E-value=5.8 Score=36.64 Aligned_cols=73 Identities=22% Similarity=0.227 Sum_probs=44.0
Q ss_pred CCCcEEEEEEcCCCC-CC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 9 EGKGVIVSWVTPDEP-GS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~-~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
..+++.|.|..+... +. ..|+|...+...+.... .........|.+|+|++.|.|+|..
T Consensus 208 ~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G 276 (389)
T 2jll_A 208 SQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNTTYEIRVAAVNGKG 276 (389)
T ss_dssp CSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTCEEEEEEEEEESSC
T ss_pred cCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCCEEEEEEEEEcCCc
Confidence 357899999864322 11 24666665543332111 0112245778999999999999954
Q ss_pred -CCceeeEEEEcCCC
Q 040421 79 -GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -~~~s~~~~F~T~p~ 92 (407)
+..|....|+|.+.
T Consensus 277 ~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 277 QGDYSKIEIFQTLPV 291 (389)
T ss_dssp BCCCCCCEEEECCCC
T ss_pred cCCCCcceEEEecCC
Confidence 23456677888653
No 186
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=83.89 E-value=2 Score=36.43 Aligned_cols=59 Identities=12% Similarity=0.056 Sum_probs=32.7
Q ss_pred CCcEEEEEEcCCCCC---CCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEPG---SNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~---~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+++.|.|..+..+. .-.|+|...++ ..+..+... ......+.|.+|+|||.|..||..
T Consensus 124 ~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 124 IGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEVY----------DAKSKSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp TTEEEEEC--------CEEEEEEEEESSSSCCCEEEEEC----------C---CEEEECCSCTTSCEEEEEEE
T ss_pred CCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEecc----------cCcceeEEeecCCCCCEEEEEEEE
Confidence 578999999874322 34677777652 223222110 111235788999999999999964
No 187
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=83.48 E-value=1.7 Score=37.49 Aligned_cols=76 Identities=13% Similarity=0.127 Sum_probs=46.9
Q ss_pred CCcEEEEEEcCCCC---------CCCEEEEeecCCCCceEE-EEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-
Q 040421 10 GKGVIVSWVTPDEP---------GSNTVLYWAENSTLKQQA-HGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~---------~~~~v~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~- 78 (407)
...+.|.|..+... -.-.|+|....+ .+..+ ..... . .......+.+.+|.||+.|..||..
T Consensus 112 ~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~--~----~~~~~~~~~~~~L~p~t~Y~vqVRa~ 184 (219)
T 3tgx_A 112 SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLI--S----VDSRSVSLLPLEFRKDSSYELQVRAG 184 (219)
T ss_dssp SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEE--C----SSCSEEEECTTSSCSSCEEEEEEEEE
T ss_pred CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeE--e----cCCCEEEEEeccCCCCCEEEEEEEEe
Confidence 36899999986431 135678877764 22211 11110 0 1123455668899999999999942
Q ss_pred --------C---CceeeEEEEcCCC
Q 040421 79 --------G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 --------~---~~s~~~~F~T~p~ 92 (407)
| .||+...|.|++.
T Consensus 185 ~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 185 PMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp ECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred eCCCCCCCCcCcCCCCCeEEECCch
Confidence 2 3688899999764
No 188
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=83.47 E-value=6 Score=37.44 Aligned_cols=68 Identities=15% Similarity=0.283 Sum_probs=42.3
Q ss_pred CCcEEEEEEcCCCCC-----------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEPG-----------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+++.|+|. +.... .-.|.|+..++.......+ -...++|.+|.|+|.|..+|..
T Consensus 117 ~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~~~V~A 182 (414)
T 3se4_A 117 DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYKLSPETTYCLKVKA 182 (414)
T ss_dssp SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEEE-------------ECSEEEECCCCTTCEEEEEEEE
T ss_pred CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEec-------------CCcEEEEcCCCCCCeEEEEEEE
Confidence 358999999 64221 2467777766533221111 1234789999999999999864
Q ss_pred C--------CceeeEEEEcCC
Q 040421 79 G--------NATRQFSFTTPP 91 (407)
Q Consensus 79 ~--------~~s~~~~F~T~p 91 (407)
- ..|+...++|..
T Consensus 183 ~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 183 ALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp ECTTTCCEEEECCCEEEECCS
T ss_pred EeccCCCCCccCccccccccc
Confidence 1 245556677753
No 189
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=82.65 E-value=3.2 Score=35.29 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=41.0
Q ss_pred eeccCCCCCcEEEEEEcCCCC-------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
|++....+..+.|.|..+... =.-.|+|....+.-. ...... . .......+.+.+|.||+.|..|
T Consensus 104 l~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~-~~~~~~---~----~~~~~~~~~~~~L~p~~~Y~vq 175 (207)
T 1iar_B 104 LTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPAD-FRIYNV---T----YLEPSLRIAASTLKSGISYRAR 175 (207)
T ss_dssp EEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSC-EEEEEE---C----SSCCEEEECC-----CCCEEEE
T ss_pred eEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchh-heeeee---e----cCCcEEEEEHHHCCCCCEEEEE
Confidence 333322345799999987421 125788887654322 111110 0 1233455667799999999999
Q ss_pred eCc------C---CceeeEEEEcCCC
Q 040421 76 VGV------G---NATRQFSFTTPPG 92 (407)
Q Consensus 76 v~~------~---~~s~~~~F~T~p~ 92 (407)
|.. | .||....|+|.+.
T Consensus 176 VR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 176 VRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp EEEECGGGTCCCCCCCCCEEEC----
T ss_pred EEEecCCCCCCCCCCCcCeEEECCCC
Confidence 963 2 4778889998754
No 190
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=82.46 E-value=2 Score=42.09 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=49.1
Q ss_pred ccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 5 QGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
.....++++.|.|..+.... .-.|+|...++..+. ...... . .....+.+.|.+|+|+|.|..||..
T Consensus 395 v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~-~~~~~~-----~-~~~~~~~v~l~~L~P~T~Y~~rVRA~~ 467 (488)
T 2q7n_A 395 VKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEV-RNATIR-----G-AEDSTYHVAVDKLNPYTAYTFRVRCSS 467 (488)
T ss_dssp EEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEE-EEEEEE-----C-CEEEEEEEEECSCCSSCCBBCCEEEEE
T ss_pred EEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCce-EEEEEe-----c-CCCcEEEEEeCCCCCCceEEEEEEEEE
Confidence 33335678999999874322 235677766543221 111110 0 0123566799999999999998853
Q ss_pred ---C---CceeeEEEEcCCC
Q 040421 79 ---G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 ---~---~~s~~~~F~T~p~ 92 (407)
+ .||....|+|++.
T Consensus 468 ~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 468 KTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp SSCSSCCCCCCCCCBCCCCC
T ss_pred CCCCCCCCCcCCEeEECCCC
Confidence 2 4677778888653
No 191
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=82.14 E-value=0.57 Score=46.73 Aligned_cols=79 Identities=16% Similarity=0.234 Sum_probs=47.2
Q ss_pred cCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 6 GDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
.....+++.|.|..+.... .-.|+|....+..+..+.. ...........|.+|+|+|.|.+||..
T Consensus 210 ~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~--------~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 281 (589)
T 3l5h_A 210 SEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP--------EDTASTRSSFTVQDLKPFTEYVFRIRCMKE 281 (589)
T ss_dssp TTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCT--------TSSCSCCSEEEECSCCSSCCEEEEEEEEES
T ss_pred cCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEcc--------ccCcCceeEEEECCCCCCCEEEEEEEEEeC
Confidence 4446789999998764221 2466777665433321100 001112345678999999999999954
Q ss_pred ---C---CceeeEEEEcCCC
Q 040421 79 ---G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 ---~---~~s~~~~F~T~p~ 92 (407)
+ .||....|+|.+.
T Consensus 282 ~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 282 DGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp SSCSCCCCCCCCBCCCCCCC
T ss_pred CCCCccCCCCCccccccCcc
Confidence 2 2356667777653
No 192
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=82.09 E-value=2.3 Score=36.28 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=43.7
Q ss_pred CCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--------CCc
Q 040421 10 GKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--------GNA 81 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--------~~~ 81 (407)
.+++.|.|.-+...-.-.|.|+..++....... .+. .....++|.+|+|+|.|..+|.. +..
T Consensus 121 ~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~~----~~~------~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~ 190 (206)
T 4doh_B 121 GFHLVIELEDLGPQFEFLVAYWRREPGAEEHVK----MVR------SGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAF 190 (206)
T ss_dssp TTEEEEEECCCCTTCEEEEEEEESSSSCCCEEE----EEC------CSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCC
T ss_pred CCEEEEEecCCCCcEEEEEEEEEcCCCceeEEe----EEc------cCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCC
Confidence 578999998652223567888887653321111 010 01134789999999999999853 245
Q ss_pred eeeEEEEcCC
Q 040421 82 TRQFSFTTPP 91 (407)
Q Consensus 82 s~~~~F~T~p 91 (407)
|....|+|..
T Consensus 191 S~~~C~~t~~ 200 (206)
T 4doh_B 191 SQTECVEVQG 200 (206)
T ss_dssp CCCEEECC--
T ss_pred CCCEeEEccc
Confidence 6667777753
No 193
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=81.85 E-value=2.2 Score=43.63 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=38.2
Q ss_pred eeccCCCCCcEEEEEEcCCCC-C---CCEEEEeecCC--------CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-G---SNTVLYWAENS--------TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDT 70 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~---~~~v~y~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 70 (407)
|.+.+..+++++|.|...... . ...|+|....+ ..+..+.. .....++|++|+|+|
T Consensus 167 l~v~~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~i~~L~P~t 234 (680)
T 1zlg_A 167 LRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQLTDIRPSR 234 (680)
T ss_pred ceEEeccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEEeCCCCCCC
Confidence 444555678999999986321 1 13566665422 11221111 012246789999999
Q ss_pred EEEEEeCc
Q 040421 71 KYYYEVGV 78 (407)
Q Consensus 71 ~Y~Y~v~~ 78 (407)
.|.|||..
T Consensus 235 ~Y~frV~A 242 (680)
T 1zlg_A 235 WYQFRVAA 242 (680)
T ss_pred EEEEEEEE
Confidence 99999954
No 194
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=81.64 E-value=0.72 Score=45.16 Aligned_cols=82 Identities=16% Similarity=0.136 Sum_probs=50.1
Q ss_pred eeccCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|++....++++.|.|..+... -.-.|+|....+..... .+.... .....+.+.|.+|+|+|.|..||..
T Consensus 388 l~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~~-~~~~~~s~~l~~L~PgT~Y~vrVRA 460 (483)
T 3e0g_A 388 FKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQG-VENSSYLVALDKLNPYTLYTFRIRC 460 (483)
T ss_dssp EEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCBC-CSSSBCCCCCCSCCSSSSCEEEEEC
T ss_pred eEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEec-cCCceeEEEEeccCCCcEEEEEEEE
Confidence 344344467899999987432 14688898876432110 111000 0112345679999999999999964
Q ss_pred C--------CceeeEEEEcCC
Q 040421 79 G--------NATRQFSFTTPP 91 (407)
Q Consensus 79 ~--------~~s~~~~F~T~p 91 (407)
. .||+...|+|+.
T Consensus 461 ~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 461 STETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp CCSSCCCCCCCCCCCCCCCCC
T ss_pred eeCCCCCcCCCCCceeeECCC
Confidence 2 467777888864
No 195
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=79.87 E-value=4 Score=35.88 Aligned_cols=70 Identities=9% Similarity=0.116 Sum_probs=44.1
Q ss_pred CCcEEEEEEcCCCCC--CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---------
Q 040421 10 GKGVIVSWVTPDEPG--SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--------- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--------- 78 (407)
...+.|.|..+.... .-.|+|....+..+..+... ......|.+|.|++.|..||..
T Consensus 150 ~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~~~~------------~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~ 217 (247)
T 2erj_C 150 ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSVD------------YRHKFSLPSVDGQKRYTFRVRSRFNPLCGSA 217 (247)
T ss_dssp SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEEEEC------------SSCEEEESCCCTTSCEEEEEEEEECSSSCCC
T ss_pred CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEEecC------------CceEEEecCCCCCCEEEEEEEEEeCCCCCCC
Confidence 368999999974211 23588887655444432210 1124567899999999999953
Q ss_pred C---CceeeEEEEcCC
Q 040421 79 G---NATRQFSFTTPP 91 (407)
Q Consensus 79 ~---~~s~~~~F~T~p 91 (407)
+ .||....|.|.+
T Consensus 218 g~WSeWS~~~~~~t~~ 233 (247)
T 2erj_C 218 QHWSEWSHPIHWGSNT 233 (247)
T ss_dssp CCCCCCCCCEEECC--
T ss_pred CccCCCCcCEEEECCC
Confidence 1 366777787754
No 196
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=78.71 E-value=0.27 Score=52.29 Aligned_cols=34 Identities=18% Similarity=0.072 Sum_probs=26.1
Q ss_pred EEEEEcCCCCCCEEEEEeCc-----------CCceeeEEEEcCCC
Q 040421 59 HHCTIEDLEFDTKYYYEVGV-----------GNATRQFSFTTPPG 92 (407)
Q Consensus 59 ~~~~l~gL~p~t~Y~Y~v~~-----------~~~s~~~~F~T~p~ 92 (407)
..++|++|+|+|.|.++|.. +.+|....|+|++.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~ 593 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT 593 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC
Confidence 45789999999999999976 23466677888653
No 197
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=75.05 E-value=5.3 Score=33.54 Aligned_cols=69 Identities=9% Similarity=0.146 Sum_probs=42.2
Q ss_pred CCcEEEEEEcCCCCC--CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--------
Q 040421 10 GKGVIVSWVTPDEPG--SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-------- 79 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-------- 79 (407)
...+.|.|..+.... .-.|+|....+..+..+.. .......|.+|.|++.|..||...
T Consensus 112 ~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~~~------------~~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~ 179 (199)
T 2b5i_C 112 ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQSV------------DYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSA 179 (199)
T ss_dssp TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEEE------------CSSCEEEECSCCTTSCEEEEEEEECCSSSCCC
T ss_pred CCCEEEEECCCCCCCceEEEEEEeecCCcccEEEec------------cCceEEEecCCCCCcEEEEEEEEeccCCcCcC
Confidence 368999999974211 3468888866544433211 012346778999999999999531
Q ss_pred ----CceeeEEEEcC
Q 040421 80 ----NATRQFSFTTP 90 (407)
Q Consensus 80 ----~~s~~~~F~T~ 90 (407)
.||....|.|.
T Consensus 180 g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 180 QHWSEWSHPIHWGSN 194 (199)
T ss_dssp CCCCCCCCCEEC---
T ss_pred CeECCCCCCEEecCC
Confidence 35666666664
No 198
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=74.38 E-value=2.6 Score=36.49 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=22.4
Q ss_pred EEEEcCCCCCCEEEEEeCcC------CceeeEEEEcCC
Q 040421 60 HCTIEDLEFDTKYYYEVGVG------NATRQFSFTTPP 91 (407)
Q Consensus 60 ~~~l~gL~p~t~Y~Y~v~~~------~~s~~~~F~T~p 91 (407)
..++++|+|+|.|.+||..- .+|....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 45678999999999999652 245566676654
No 199
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=73.78 E-value=3 Score=42.82 Aligned_cols=79 Identities=15% Similarity=0.167 Sum_probs=46.4
Q ss_pred CCCCCcEEEEEEcCCCC------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 7 DHEGKGVIVSWVTPDEP------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
...+++++|.|.-.... ....|+|.............. ... .......++|++|+|+|.|.++|..-
T Consensus 370 ~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~--~~~----~~~~~~~~~i~~L~p~t~Y~~~V~A~n 443 (731)
T 2v5y_A 370 EVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEV--SWD----TENSHPQHTITNLSPYTNVSVKLILMN 443 (731)
T ss_dssp EECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEE--ECC----SSCSSCEEEECSCCSSCEEEEEEEEEC
T ss_pred eccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeE--EEE----ecCCcceEEECCCCCCCEEEEEEEEEc
Confidence 34567899999986311 124577777653222111110 011 11223457899999999999999642
Q ss_pred ----CceeeEEEEcCC
Q 040421 80 ----NATRQFSFTTPP 91 (407)
Q Consensus 80 ----~~s~~~~F~T~p 91 (407)
..|....++|..
T Consensus 444 ~~G~s~S~~~~~~T~~ 459 (731)
T 2v5y_A 444 PEGRKESQELIVQTDE 459 (731)
T ss_dssp SSCEEECCCEEEECCC
T ss_pred CCCCCCCceEEEEccC
Confidence 235667788864
No 200
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=72.91 E-value=5.4 Score=39.50 Aligned_cols=84 Identities=18% Similarity=0.191 Sum_probs=44.4
Q ss_pred CCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCce-EEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 8 HEGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQ-QAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
...++++|.|.-+.... .-.|+|......... ...+....+.. .........++|++|+|+|.|.++|..-
T Consensus 344 vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~-~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~ 422 (536)
T 3fl7_A 344 GMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSE-PPHGLTRTSVTVSDLEPHMNYTFTVEARNG 422 (536)
T ss_dssp CCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESS-CSSSBCSSEEEEECCCTTCEEEEEEEEECT
T ss_pred ecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEE-eecCCccceeEeCCCCCCCEEEEEEEEEec
Confidence 45679999998764322 235566553211000 00000000100 0011224567899999999999999531
Q ss_pred -------CceeeEEEEcCCC
Q 040421 80 -------NATRQFSFTTPPG 92 (407)
Q Consensus 80 -------~~s~~~~F~T~p~ 92 (407)
..+....++|.+.
T Consensus 423 ~G~~sps~~s~~v~v~T~~~ 442 (536)
T 3fl7_A 423 VSGLVTSRSFRTASVSINQT 442 (536)
T ss_dssp TGGGCSCCCEEEEEEECCSC
T ss_pred CCCCCCCCccceeEEeeccc
Confidence 1345677888764
No 201
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=72.55 E-value=2.2 Score=36.71 Aligned_cols=16 Identities=19% Similarity=0.119 Sum_probs=13.2
Q ss_pred hCCCcEEEeccccccc
Q 040421 284 EYKVDVVFAAHVHAYE 299 (407)
Q Consensus 284 ~~~vdlvl~GH~H~y~ 299 (407)
..+++++++||+|...
T Consensus 176 ~~~~~~vv~GHth~~~ 191 (221)
T 1g5b_A 176 IKGADTFIFGHTPAVK 191 (221)
T ss_dssp CBTSSEEEECSSCCSS
T ss_pred ccCCCEEEECCCCCcc
Confidence 3578999999999754
No 202
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=72.51 E-value=7.7 Score=34.99 Aligned_cols=67 Identities=9% Similarity=-0.017 Sum_probs=36.3
Q ss_pred CCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEE---EEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 10 GKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIV---LTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
.+++.|.|..+.... .-.|+|....+..+....... ..... .........+.|.+|+|+|.|..||.
T Consensus 212 ~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~-~~~~~~~~~~~l~~L~p~t~Y~~qVr 285 (314)
T 3bpo_C 212 NDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEF-ERNVENTSCFMVPGVLPDTLNTVRIR 285 (314)
T ss_dssp TTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTS-SCCCSSEEEEEEESCCTTSCEEEEEE
T ss_pred CCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEeccccccccccc-ccccCCceEEEEccCCCCCEEEEEEE
Confidence 468999999875322 245777766543322111000 00000 00012345678999999999999985
No 203
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=71.93 E-value=15 Score=35.34 Aligned_cols=80 Identities=8% Similarity=-0.017 Sum_probs=48.1
Q ss_pred CCcEEEEEecCCCCCCc--hhhHHHhhh---CCCCCceEEEcCCccccCCC----------CC--CCchhhhHHH-HHHh
Q 040421 97 VPYTFGLIGDLGQTYYS--NRTLTHYEL---NPIKGQTVLFVGDLSYADDY----------PF--HDNNRWDTWG-RFIE 158 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~--~~~l~~~~~---~~~~~d~vl~~GD~~y~~~~----------~~--~~~~~~~~~~-~~~~ 158 (407)
.++++++.+........ ..-+..+++ +..+||.+|++|.+++.... ++ .+...++.++ ..+.
T Consensus 146 ~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t~~~lF~~~i~ 225 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDNFSLELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKTLDELFLKLFT 225 (460)
T ss_dssp SCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSSHHHHHHHHTH
T ss_pred CCcEEEEEeCCccCCCccChHHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccCHHHHHHHHHH
Confidence 67999999998766542 233333332 21279999999999976521 00 0122334433 3333
Q ss_pred h----hhccCCeEEccCCCccc
Q 040421 159 R----NAAYQPWIWTVGNHEID 176 (407)
Q Consensus 159 ~----~~~~~P~~~~~GNHD~~ 176 (407)
+ +...+-++.+||+||..
T Consensus 226 ~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 226 PILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHhccCCCEEEEeCCccccc
Confidence 3 33446689999999984
No 204
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=71.86 E-value=13 Score=32.73 Aligned_cols=60 Identities=22% Similarity=0.211 Sum_probs=35.8
Q ss_pred CCCCCcEEEEEEcCCCC-CCC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 7 DHEGKGVIVSWVTPDEP-GSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
....++++|.|..+... ... .|+|.+.+...+...... ......|.+|+|++.|.|+|..
T Consensus 209 ~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~~~~~------------~~~~~~i~~l~~~~~y~~~~~A 273 (305)
T 2nzi_A 209 DVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLRVGQA------------RETRYTVINLFGKTSYQFRVIA 273 (305)
T ss_dssp SCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEEEEEE------------SSSEEEECSCCSSCEEEEEEEE
T ss_pred eccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEECccc------------cCceEEecCCCCCCeEEEEEEE
Confidence 34567899999964322 222 344444443333222211 0234678999999999999965
No 205
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=69.35 E-value=20 Score=33.75 Aligned_cols=85 Identities=15% Similarity=0.182 Sum_probs=47.7
Q ss_pred CcEEEEEEcCCCCC----------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 11 KGVIVSWVTPDEPG----------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 11 ~~~~v~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
+.+.|+|..+.... .-.|+|.... ..+..+... . .......+.+.+|.|++.|..||..
T Consensus 122 ~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~~~-~-------~~~~~~~~~~~~L~p~~~Y~~rVra~~ 192 (419)
T 2gys_A 122 DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAAIL-L-------SNTSQATLGPEHLMPSSTYVARVRTRL 192 (419)
T ss_dssp TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCEEE-E-------ESSSEEEECTTTCCTTCEEEEEEEEEE
T ss_pred CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhheeee-c-------ccceEEEechhhcCCCCeEEEEEEEec
Confidence 58999999975321 1466777664 222222111 0 0112223334499999999999853
Q ss_pred -------C---CceeeEEEEcCCCCCCCCCcEEEEEe
Q 040421 79 -------G---NATRQFSFTTPPGVGPDVPYTFGLIG 105 (407)
Q Consensus 79 -------~---~~s~~~~F~T~p~~~~~~~~~f~~~g 105 (407)
+ .||+...|+|++.. ...+-.+-...
T Consensus 193 ~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~ 228 (419)
T 2gys_A 193 APGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFF 228 (419)
T ss_dssp CTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEE
T ss_pred CCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEE
Confidence 1 25678889987754 33344444443
No 206
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=67.96 E-value=3.7 Score=34.56 Aligned_cols=59 Identities=15% Similarity=0.119 Sum_probs=34.8
Q ss_pred CCCcEEEEEEcCCCCC---CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCC-CCCCEEEEEeCc
Q 040421 9 EGKGVIVSWVTPDEPG---SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDL-EFDTKYYYEVGV 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL-~p~t~Y~Y~v~~ 78 (407)
..+++++.|.-..... ...|+|......... ... ...-...++|.+| +|++.|.++|..
T Consensus 20 ~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~~~-----~~~------~~~~~~~~~i~~L~~~~t~Y~~~V~A 82 (215)
T 1bqu_A 20 EGKKMRCEWDGGRETHLETNFTLKSEWATHKFAD-----CKA------KRDTPTSCTVDYSTVYFVNIEVWVEA 82 (215)
T ss_dssp TTSCCEEEEECCSCCSSCCEEEEEEEETTEECCC-----EEC------CSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred CCCcEEEEcCCCCCCCCCceEEEEEEEcCCCccc-----ccc------ccCCcceEEEcCCccccccEEEEEEE
Confidence 3478999999875432 235555543211110 000 0112245789999 999999999965
No 207
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=66.61 E-value=7.9 Score=33.31 Aligned_cols=29 Identities=14% Similarity=0.140 Sum_probs=19.2
Q ss_pred EcCCCCCCEEEEEeCc------CCceeeEEEEcCC
Q 040421 63 IEDLEFDTKYYYEVGV------GNATRQFSFTTPP 91 (407)
Q Consensus 63 l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p 91 (407)
+.+|.|++.|.+||.. +.+|....+.+.+
T Consensus 167 ~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp CBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 5689999999999954 2345555555443
No 208
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=61.95 E-value=1.1 Score=47.62 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=26.0
Q ss_pred EEEEcCCCCCCEEEEEeCc------CCceeeEEEEcCCCCC
Q 040421 60 HCTIEDLEFDTKYYYEVGV------GNATRQFSFTTPPGVG 94 (407)
Q Consensus 60 ~~~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p~~~ 94 (407)
.++|++|+|| +|.+||.. +.+|....|+|++.+.
T Consensus 852 ~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p~ 891 (897)
T 2dtg_E 852 GCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYLD 891 (897)
T ss_dssp CCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC-
T ss_pred cEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCCC
Confidence 4578999999 69999854 3467888999987653
No 209
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=56.70 E-value=7.2 Score=36.96 Aligned_cols=70 Identities=21% Similarity=0.292 Sum_probs=39.2
Q ss_pred CCcEEEEEEcCCC--CC---CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-----
Q 040421 10 GKGVIVSWVTPDE--PG---SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG----- 79 (407)
Q Consensus 10 ~~~~~v~W~t~~~--~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~----- 79 (407)
.+++.|.|..+.. +. .-.|+|...+.. +...... ... -...+.|.+|+|||.|..||...
T Consensus 333 ~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~-w~~~~~~--~~~-------~~~~~~l~~L~p~t~Y~~qVRa~~~~g~ 402 (419)
T 2gys_A 333 GDSYSLRWETMKMRYEHIDHTFEIQYRKDTAT-WKDSKTE--TLQ-------NAHSMALPALEPSTRYWARVRVRTSRTG 402 (419)
T ss_dssp -CCCEEEEEC--------CEEEEEEEECSSSC-STTSCEE--EEE-------SCSEEECCCCCSSCCCEEEEEEEECCTT
T ss_pred CCeEEEEECCCcccccccceEEEEEEEcCCCC-cceeecc--ccc-------cccEEEeccCCCCCeEEEEEEEEEcCCC
Confidence 5789999998732 11 346778776532 1111000 000 12357889999999999998531
Q ss_pred ------CceeeEEEEc
Q 040421 80 ------NATRQFSFTT 89 (407)
Q Consensus 80 ------~~s~~~~F~T 89 (407)
.||....|+|
T Consensus 403 ~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 403 YNGIWSEWSEARSWDT 418 (419)
T ss_dssp CCBCCCCCCCCEECCC
T ss_pred CCCccCCCCCCeEeeC
Confidence 3456666655
No 210
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=56.59 E-value=2.3 Score=40.41 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=0.0
Q ss_pred EEEEEcCCCCCCEEEEEeCcC----------CceeeEEEEcCCC
Q 040421 59 HHCTIEDLEFDTKYYYEVGVG----------NATRQFSFTTPPG 92 (407)
Q Consensus 59 ~~~~l~gL~p~t~Y~Y~v~~~----------~~s~~~~F~T~p~ 92 (407)
..++|.+|+|+|.|..+|..- .+|+...|+|.+.
T Consensus 367 ~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~ 410 (414)
T 3se4_A 367 TDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPG 410 (414)
T ss_dssp --------------------------------------------
T ss_pred CeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEeCCC
Confidence 457899999999999988542 2455566666543
No 211
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=56.20 E-value=39 Score=34.42 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=41.7
Q ss_pred CCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----C-
Q 040421 10 GKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----G- 79 (407)
Q Consensus 10 ~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----~- 79 (407)
.++++|.|...... ....|+|...+. .+.... . .. ....+|.+|+|++.|.|+|.. .
T Consensus 275 ~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~-~~~~~~----~------~~--~~~~~i~~L~p~t~Y~~~V~A~~~N~~ 341 (731)
T 2v5y_A 275 ATYLWIQLNANSINGDGPIVAREVEYCTASG-SWNDRQ----P------VD--STSYKIGHLDPDTEYEISVLLTRPGEG 341 (731)
T ss_dssp SSCEEEECCCSSBSSCSCCCEEEEEEEESSS-SCEEEE----E------CC--SSEEEECSCCTTCEEEEEEEEECSSTT
T ss_pred CceEEEEeCCcccCCCCccEEEEEEEEECCC-CceEEe----c------cC--cceEEEeCCCCCCEEEEEEEEEecCCC
Confidence 46889999764211 123677776543 222111 0 00 145688999999999999852 1
Q ss_pred ---CceeeEEEEcCCC
Q 040421 80 ---NATRQFSFTTPPG 92 (407)
Q Consensus 80 ---~~s~~~~F~T~p~ 92 (407)
.+|....++|.+.
T Consensus 342 G~s~~S~~~~~~t~~~ 357 (731)
T 2v5y_A 342 GTGSPGPALRTRTKCA 357 (731)
T ss_dssp CSCCBCCCEEEECCCC
T ss_pred ccccCCCcEEeeecCC
Confidence 2355677888653
No 212
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=54.09 E-value=15 Score=33.52 Aligned_cols=56 Identities=20% Similarity=0.257 Sum_probs=32.3
Q ss_pred CCCcEEEEEEcCC-CCCCCEEEEeecC-CCC--ceEEEE--EEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 9 EGKGVIVSWVTPD-EPGSNTVLYWAEN-STL--KQQAHG--IVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~-~~~~~~v~y~~~~-~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..+++.++|..+. ......| |+.+. ... ...+.. +.++| +=++|.+||+|||.|..
T Consensus 29 ~~~~v~LsWs~s~~~v~~~~V-YRdT~s~~sgr~ria~~~~st~ty-------------tDt~~~~GttYyYwVk~ 90 (344)
T 3b4n_A 29 KSDVNYLGWSTDESKVARQEV-YRGTTSNPDLRERIAVLDAETRTF-------------KDADTNSGLNYWYWVDV 90 (344)
T ss_dssp ETTEEEEEEEECCSSEEEEEE-EEESSSCGGGCEEEEEECSSCCEE-------------EECCCCTTCCCEEEEEE
T ss_pred cCCeEEEEeecCCCCeeeEEE-EccCCCCCCcceEEEeecccccEE-------------EecCcCCCcEEEEEEEE
Confidence 3578999999874 2223344 44433 322 222221 11222 23699999999999965
No 213
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=54.01 E-value=23 Score=34.87 Aligned_cols=62 Identities=13% Similarity=0.112 Sum_probs=36.0
Q ss_pred CCcEEEEEEcCCC-CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDE-PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.++++|.|..+.. .....|+|............ +... .........+++|+|++.|.++|..
T Consensus 413 ~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~~~--~~~~~~~~~~~~L~p~t~Y~~~V~A 475 (589)
T 3l5h_A 413 DNMLWVEWTTPRESVKKYILEWCVLSDKAPCITD-----WQQE--DGTVHRTYLRGNLAESKCYLITVTP 475 (589)
T ss_dssp SSSEEEECCCCSSCCSCBCCEEEEECSSSCCCEE-----ECCB--CSSCCEEECCSCCCSSSEEEEEECB
T ss_pred CCeEEEEEECCCCCccEEEEEEEECCCCCCCccC-----cEEe--eCCcceEEehhccccCcEEEEEEEE
Confidence 4789999988743 23456777665542110000 0000 1112334457999999999999974
No 214
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=46.65 E-value=13 Score=33.04 Aligned_cols=20 Identities=15% Similarity=0.132 Sum_probs=17.5
Q ss_pred EEEEEcCC-CCCCEEEEEeCc
Q 040421 59 HHCTIEDL-EFDTKYYYEVGV 78 (407)
Q Consensus 59 ~~~~l~gL-~p~t~Y~Y~v~~ 78 (407)
..++|.+| +|++.|.++|..
T Consensus 158 ~~~~i~~L~~p~t~Y~f~V~A 178 (303)
T 1i1r_A 158 TSCTVDYSTVYFVNIEVWVEA 178 (303)
T ss_dssp TEEECSSCCCTTSCEEEEEEE
T ss_pred eEEEECCcCcccccEEEEEEE
Confidence 46789999 999999999965
No 215
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=41.60 E-value=6.6 Score=33.46 Aligned_cols=19 Identities=21% Similarity=0.268 Sum_probs=6.6
Q ss_pred EEEEcCCCCCCEEEEEeCc
Q 040421 60 HCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 60 ~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.++|.+|+|+|.|..+|..
T Consensus 173 ~~~i~~L~p~t~Ycv~V~a 191 (211)
T 3g9v_A 173 AVEIEALTPHSSYCVVAEI 191 (211)
T ss_dssp CCC----------CEEEEE
T ss_pred EEEEecCCCCCeEEEEEEE
Confidence 4679999999999988865
No 216
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=31.37 E-value=14 Score=37.23 Aligned_cols=35 Identities=23% Similarity=0.416 Sum_probs=25.1
Q ss_pred EEEEEEcCCCCCCEEEEEeCc----CC---ceeeEEEEcCCC
Q 040421 58 IHHCTIEDLEFDTKYYYEVGV----GN---ATRQFSFTTPPG 92 (407)
Q Consensus 58 ~~~~~l~gL~p~t~Y~Y~v~~----~~---~s~~~~F~T~p~ 92 (407)
.+..++++|+|+|.|.|+|.. +. .++....+|.+.
T Consensus 112 ~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 112 MQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred eeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 456788999999999999965 21 245556666554
No 217
>3s9d_B Interferon alpha/beta receptor 2; human, type I interferons, IFNA2, ifnar2, SUB-complex of the interferon signaling complex; 2.00A {Homo sapiens} PDB: 1n6u_A 1n6v_A 2hym_A 2ksx_B 2kz1_B 2lag_B 3se4_C* 3se3_C* 3s8w_A*
Probab=22.47 E-value=64 Score=27.09 Aligned_cols=21 Identities=24% Similarity=0.216 Sum_probs=17.9
Q ss_pred EEEEEEcCCCCCCEEEEEeCc
Q 040421 58 IHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 58 ~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+..+|.+|.|+|.|.-+|..
T Consensus 159 ~~~~vi~~L~P~T~YCv~V~~ 179 (199)
T 3s9d_B 159 NFTYIIDKLIPNTNYCVSVYL 179 (199)
T ss_dssp EEEEEECSCCSSCEEEEEEEE
T ss_pred cceEEEeccCCCCcEEEEEEE
Confidence 468899999999999988753
No 218
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=20.66 E-value=87 Score=23.52 Aligned_cols=25 Identities=12% Similarity=-0.004 Sum_probs=20.0
Q ss_pred cceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 54 TSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 54 ~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..+..-+|..+||.|++.|+--...
T Consensus 13 ~DGq~VtV~~tGl~p~~~y~v~~Ca 37 (112)
T 2mcm_A 13 SNGQTVTVSATGLTPGTVYHVGQCA 37 (112)
T ss_dssp CTTEEEEEEEESCCTTCEEEEEEEE
T ss_pred CCCCEEEEEEEccCCCCeEEEEEcc
Confidence 4567778899999999999876543
Done!