Your job contains 1 sequence.
>040427
MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADE
KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY
IKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIF
WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV
CDALPCALVGMNGELMSQYIEFVADRLLGALGYGKLYGVANPFDWMELISLQGKTNFFEK
RVGEYQKASVMSSLNGNGGNHVFKIDEDF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040427
(329 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2092030 - symbol:TSO2 "TSO MEANING 'UGLY' IN C... 1444 7.1e-148 1
TAIR|locus:2088040 - symbol:RNR2A "ribonucleotide reducta... 1268 3.2e-129 1
RGD|2323655 - symbol:LOC100359539 "ribonucleotide reducta... 1163 4.2e-118 1
RGD|1598310 - symbol:Rrm2 "ribonucleotide reductase M2" s... 1160 8.8e-118 1
UNIPROTKB|E1BI58 - symbol:RRM2 "Uncharacterized protein" ... 1153 4.9e-117 1
ZFIN|ZDB-GENE-990415-25 - symbol:rrm2 "ribonucleotide red... 1153 4.9e-117 1
MGI|MGI:98181 - symbol:Rrm2 "ribonucleotide reductase M2"... 1148 1.6e-116 1
UNIPROTKB|I3LUY0 - symbol:RRM2 "Uncharacterized protein" ... 1145 3.4e-116 1
UNIPROTKB|Q60561 - symbol:RRM2 "Ribonucleoside-diphosphat... 1143 5.6e-116 1
UNIPROTKB|E1BXP4 - symbol:RRM2 "Uncharacterized protein" ... 1137 2.4e-115 1
UNIPROTKB|P31350 - symbol:RRM2 "Ribonucleoside-diphosphat... 1136 3.1e-115 1
UNIPROTKB|Q4R7Q7 - symbol:RRM2 "Ribonucleoside-diphosphat... 1135 3.9e-115 1
UNIPROTKB|F1P0T9 - symbol:RRM2B "Uncharacterized protein"... 1134 5.0e-115 1
UNIPROTKB|E1BFQ8 - symbol:RRM2B "Uncharacterized protein"... 1108 2.9e-112 1
UNIPROTKB|E2RQ55 - symbol:RRM2B "Uncharacterized protein"... 1107 3.6e-112 1
UNIPROTKB|H0YAV1 - symbol:RRM2B "Ribonucleoside-diphospha... 1106 4.6e-112 1
UNIPROTKB|Q7LG56 - symbol:RRM2B "Ribonucleoside-diphospha... 1106 4.6e-112 1
ZFIN|ZDB-GENE-030616-614 - symbol:rrm2b "ribonucleotide r... 1105 5.9e-112 1
MGI|MGI:2155865 - symbol:Rrm2b "ribonucleotide reductase ... 1103 9.7e-112 1
UNIPROTKB|F1S0R3 - symbol:RRM2B "Uncharacterized protein"... 1102 1.2e-111 1
DICTYBASE|DDB_G0274021 - symbol:rnrB-2 "ribonucleoside-di... 1101 1.6e-111 1
DICTYBASE|DDB_G0272616 - symbol:rnrB-1 "ribonucleoside-di... 1101 1.6e-111 1
UNIPROTKB|E2R7H9 - symbol:RRM2 "Uncharacterized protein" ... 1099 2.6e-111 1
RGD|1306045 - symbol:Rrm2b "ribonucleotide reductase M2 B... 1098 3.3e-111 1
GENEDB_PFALCIPARUM|PF14_0053 - symbol:PF14_0053 "ribonucl... 1077 5.5e-109 1
UNIPROTKB|Q8IM38 - symbol:PF14_0053 "Ribonucleotide reduc... 1077 5.5e-109 1
FB|FBgn0011704 - symbol:RnrS "Ribonucleoside diphosphate ... 1075 9.0e-109 1
ASPGD|ASPL0000055511 - symbol:AN0067 species:162425 "Emer... 1074 1.1e-108 1
CGD|CAL0002245 - symbol:RNR21 species:5476 "Candida albic... 1037 9.5e-105 1
POMBASE|SPBC25D12.04 - symbol:suc22 "ribonucleotide reduc... 1025 1.8e-103 1
WB|WBGene00004392 - symbol:rnr-2 species:6239 "Caenorhabd... 1009 8.8e-102 1
SGD|S000003563 - symbol:RNR2 "Ribonucleotide-diphosphate ... 1008 1.1e-101 1
UNIPROTKB|I3LV77 - symbol:I3LV77 "Uncharacterized protein... 1000 7.9e-101 1
CGD|CAL0001735 - symbol:RNR22 species:5476 "Candida albic... 994 3.4e-100 1
UNIPROTKB|Q59U83 - symbol:RNR22 "Putative uncharacterized... 994 3.4e-100 1
UNIPROTKB|C9JXC1 - symbol:RRM2 "Ribonucleoside-diphosphat... 993 4.4e-100 1
UNIPROTKB|D4ADQ1 - symbol:Rrm2b "Protein Rrm2b" species:1... 991 7.1e-100 1
WB|WBGene00019055 - symbol:F58F9.1 species:6239 "Caenorha... 678 1.5e-83 2
SGD|S000003412 - symbol:RNR4 "Ribonucleotide-diphosphate ... 690 5.6e-68 1
WB|WBGene00017610 - symbol:F19G12.2 species:6239 "Caenorh... 543 2.1e-52 1
DICTYBASE|DDB_G0291764 - symbol:DDB_G0291764 "ribonucleot... 495 2.6e-47 1
GENEDB_PFALCIPARUM|PF10_0154 - symbol:PF10_0154 "ribonucl... 376 1.1e-34 1
UNIPROTKB|Q8IJN8 - symbol:PF10_0154 "Ribonucleotide reduc... 376 1.1e-34 1
UNIPROTKB|Q4JQV7 - symbol:ORF18 "Ribonucleoside-diphospha... 288 2.2e-25 1
UNIPROTKB|P0C701 - symbol:BaRF1 "Ribonucleoside-diphospha... 285 4.6e-25 1
UNIPROTKB|Q886C0 - symbol:nrdB "Ribonucleoside-diphosphat... 249 7.0e-21 1
UNIPROTKB|Q48FF0 - symbol:nrdB "Ribonucleoside-diphosphat... 245 2.0e-20 1
TIGR_CMR|CBU_1554 - symbol:CBU_1554 "ribonucleoside-dipho... 239 8.0e-20 1
TIGR_CMR|APH_0560 - symbol:APH_0560 "ribonucleoside-dipho... 209 2.0e-15 1
TIGR_CMR|ECH_0766 - symbol:ECH_0766 "ribonucleoside-dipho... 204 1.0e-14 1
TIGR_CMR|CPS_2327 - symbol:CPS_2327 "ribonucleotide reduc... 130 2.7e-13 2
TIGR_CMR|CJE_0282 - symbol:CJE_0282 "ribonucleoside-dipho... 189 1.0e-12 1
TIGR_CMR|NSE_0520 - symbol:NSE_0520 "ribonucleoside-dipho... 185 2.6e-12 1
UNIPROTKB|P69924 - symbol:nrdB species:83333 "Escherichia... 109 8.2e-10 2
TIGR_CMR|BA_1372 - symbol:BA_1372 "ribonucleoside-diphosp... 159 3.4e-09 1
UNIPROTKB|Q9KSK1 - symbol:VC1255 "Ribonucleoside-diphosph... 108 4.9e-09 2
TIGR_CMR|VC_1255 - symbol:VC_1255 "ribonucleoside-diphosp... 108 4.9e-09 2
TIGR_CMR|SO_2416 - symbol:SO_2416 "ribonucleoside-diphosp... 96 1.3e-07 2
UNIPROTKB|Q50549 - symbol:nrdF2 "Ribonucleoside-diphospha... 143 2.5e-07 1
UNIPROTKB|P37146 - symbol:nrdF species:83333 "Escherichia... 136 1.5e-06 1
UNIPROTKB|P96416 - symbol:nrdB "R2-like ligand binding ox... 113 0.00061 1
>TAIR|locus:2092030 [details] [associations]
symbol:TSO2 "TSO MEANING 'UGLY' IN CHINESE 2"
species:3702 "Arabidopsis thaliana" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA;ISS] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0007275 "multicellular
organismal development" evidence=IMP] [GO:0012501 "programmed cell
death" evidence=IMP] [GO:0051726 "regulation of cell cycle"
evidence=IMP] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0007275 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006260
GO:GO:0006281 GO:GO:0046914 GO:GO:0051726 EMBL:AB026649
GO:GO:0012501 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 ProtClustDB:PLN02492
PANTHER:PTHR23409 EMBL:AY063837 EMBL:AY117212 IPI:IPI00520221
RefSeq:NP_189342.1 UniGene:At.24911 UniGene:At.74191 HSSP:P49723
ProteinModelPortal:Q9LSD0 SMR:Q9LSD0 STRING:Q9LSD0 PRIDE:Q9LSD0
EnsemblPlants:AT3G27060.1 GeneID:822324 KEGG:ath:AT3G27060
GeneFarm:2091 TAIR:At3g27060 InParanoid:Q9LSD0 OMA:YIADWRL
PhylomeDB:Q9LSD0 Genevestigator:Q9LSD0 GermOnline:AT3G27060
Uniprot:Q9LSD0
Length = 332
Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
Identities = 272/332 (81%), Positives = 297/332 (89%)
Query: 1 MPSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTAD 59
MPS+PEEPLL P PDRFCMFPI YPQIWEMYKKAEASFWTAEEVDLSQD R WE +L
Sbjct: 1 MPSMPEEPLLTPTPDRFCMFPIHYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLNDG 60
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+HF+ HVLAFFAASDGIVLENLA RFM++VQV+EARAFYGFQIAIENIHSEMYSLLL+T
Sbjct: 61 ERHFIKHVLAFFAASDGIVLENLASRFMSDVQVSEARAFYGFQIAIENIHSEMYSLLLDT 120
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAI 179
YIKD+ E++ LF AIET+PCVAKKA WA+ WIDGS+TFAER+IAFACVEGIFFSGSFC+I
Sbjct: 121 YIKDNKERDHLFRAIETIPCVAKKAQWAMKWIDGSQTFAERIIAFACVEGIFFSGSFCSI 180
Query: 180 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREF 239
FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLY+LL+TKLSEERVK++V +AVEIEREF
Sbjct: 181 FWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIVCDAVEIEREF 240
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFE 299
VCDALPCALVGMN +LMSQYIEFVADR V NPFDWMELISLQGKTNFFE
Sbjct: 241 VCDALPCALVGMNRDLMSQYIEFVADRLLGALGYGKVYGVTNPFDWMELISLQGKTNFFE 300
Query: 300 KRVGEYQKASVMSSLNGNGG--NHVFKIDEDF 329
KRVG+YQKASVMSS+NGNG NHVF +DEDF
Sbjct: 301 KRVGDYQKASVMSSVNGNGAFDNHVFSLDEDF 332
>TAIR|locus:2088040 [details] [associations]
symbol:RNR2A "ribonucleotide reductase 2A" species:3702
"Arabidopsis thaliana" [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA;ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=ISS] [GO:0009259 "ribonucleotide metabolic
process" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 GO:GO:0007275 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006260 GO:GO:0006281 GO:GO:0046914
GO:GO:0051726 EMBL:AB023036 SUPFAM:SSF47240 KO:K10808
UniGene:At.8049 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 EMBL:X77336 EMBL:AF372971 EMBL:AY143893
IPI:IPI00532435 PIR:S68538 RefSeq:NP_189000.1
ProteinModelPortal:P50651 SMR:P50651 STRING:P50651 PaxDb:P50651
PRIDE:P50651 EnsemblPlants:AT3G23580.1 GeneID:821937
KEGG:ath:AT3G23580 GeneFarm:2083 TAIR:At3g23580 eggNOG:COG0208
HOGENOM:HOG000255975 InParanoid:P50651 OMA:ELEIEWA PhylomeDB:P50651
ProtClustDB:PLN02492 Genevestigator:P50651 GermOnline:AT3G23580
GO:GO:0009259 PANTHER:PTHR23409 Uniprot:P50651
Length = 341
Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
Identities = 240/324 (74%), Positives = 267/324 (82%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL RF MFPI+Y IWEMYKKAEASFWTAEEVDLS D++ WEALT EKHF++
Sbjct: 18 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSEKHFIS 77
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIVLENLA RF+ +VQV EARAFYGFQIA+ENIHSEMYSLLLET+IKDS
Sbjct: 78 HILAFFAASDGIVLENLAARFLNDVQVPEARAFYGFQIAMENIHSEMYSLLLETFIKDSK 137
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
EK+RLF+AIET+PC++KKA W L+WI +FA RL+AFACVEGIFFSGSFCAIFWLKKR
Sbjct: 138 EKDRLFNAIETIPCISKKAKWCLDWIQSPMSFAVRLVAFACVEGIFFSGSFCAIFWLKKR 197
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLMPGLTFSNELISRDEGLHCDFACLLYSLL+ +L E+V +V EAVEIE EFVC ALP
Sbjct: 198 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKQLPLEKVYQIVHEAVEIETEFVCKALP 257
Query: 246 CALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGEY 305
C L+GMN LMSQYI+FVADR NPFDWME ISLQGKTNFFEKRVGEY
Sbjct: 258 CDLIGMNSNLMSQYIQFVADRLLVTLGCERTYKAENPFDWMEFISLQGKTNFFEKRVGEY 317
Query: 306 QKASVMSSLNGNGGNHVFKIDEDF 329
QKASVMS+L N+ F +EDF
Sbjct: 318 QKASVMSNLQNGNQNYEFTTEEDF 341
>RGD|2323655 [details] [associations]
symbol:LOC100359539 "ribonucleotide reductase M2 polypeptide"
species:10116 "Rattus norvegicus" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 RGD:2323655
GO:GO:0046914 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
OrthoDB:EOG4BCDN7 GeneTree:ENSGT00390000013305 OMA:YIADWRL
IPI:IPI00195947 RefSeq:XP_003751887.1 RefSeq:XP_003753140.1
Ensembl:ENSRNOT00000011163 GeneID:100359539 KEGG:rno:100359539
Uniprot:D4A7M6
Length = 390
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 226/329 (68%), Positives = 259/329 (78%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI E T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS+ N F +D DF
Sbjct: 366 RVGEYQRMGVMSNSTENS----FTLDADF 390
>RGD|1598310 [details] [associations]
symbol:Rrm2 "ribonucleotide reductase M2" species:10116 "Rattus
norvegicus" [GO:0000278 "mitotic cell cycle" evidence=IEP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISO;ISS] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0005971 "ribonucleoside-diphosphate
reductase complex" evidence=IEA] [GO:0006206 "pyrimidine nucleobase
metabolic process" evidence=IEP] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0009186 "deoxyribonucleoside
diphosphate metabolic process" evidence=IEA] [GO:0009262
"deoxyribonucleotide metabolic process" evidence=ISO] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISO;ISS]
[GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0051259 "protein oligomerization" evidence=ISO] [GO:0051290
"protein heterotetramerization" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 RGD:1598310 GO:GO:0005635 GO:GO:0008284
GO:GO:0006260 GO:GO:0006206 GO:GO:0046914 GO:GO:0000278
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
HOGENOM:HOG000255975 PANTHER:PTHR23409 HOVERGEN:HBG001647
OrthoDB:EOG4BCDN7 GeneTree:ENSGT00390000013305 CTD:6241
EMBL:BC099082 IPI:IPI00365596 RefSeq:NP_001020911.1
UniGene:Rn.144946 ProteinModelPortal:Q4KLN6 SMR:Q4KLN6
STRING:Q4KLN6 Ensembl:ENSRNOT00000037387 GeneID:362720
KEGG:rno:362720 InParanoid:Q4KLN6 ChEMBL:CHEMBL3941 NextBio:680993
Genevestigator:Q4KLN6 GermOnline:ENSRNOG00000008450 Uniprot:Q4KLN6
Length = 390
Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
Identities = 225/329 (68%), Positives = 259/329 (78%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PSI EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSIEEEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI E T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ +V IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIITNSVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS+ N F +D DF
Sbjct: 366 RVGEYQRMGVMSNSTENS----FTLDADF 390
>UNIPROTKB|E1BI58 [details] [associations]
symbol:RRM2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051290 "protein heterotetramerization" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
GO:GO:0051290 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 OMA:YIADWRL EMBL:DAAA02031933
IPI:IPI00702653 Ensembl:ENSBTAT00000010802 Uniprot:E1BI58
Length = 390
Score = 1153 (410.9 bits), Expect = 4.9e-117, P = 4.9e-117
Identities = 222/329 (67%), Positives = 261/329 (79%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL ++E+
Sbjct: 66 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKSEER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI D + T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKAATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 366 RVGEYQRMGVMSSPTENS----FTLDADF 390
>ZFIN|ZDB-GENE-990415-25 [details] [associations]
symbol:rrm2 "ribonucleotide reductase M2
polypeptide" species:7955 "Danio rerio" [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 ZFIN:ZDB-GENE-990415-25 GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
HOGENOM:HOG000255975 PANTHER:PTHR23409 HOVERGEN:HBG001647
OrthoDB:EOG4BCDN7 GeneTree:ENSGT00390000013305 OMA:YIADWRL
EMBL:U57965 EMBL:BX248136 EMBL:BC044355 EMBL:BC075746
IPI:IPI00493558 RefSeq:NP_571525.1 RefSeq:XP_002665783.1
UniGene:Dr.75098 ProteinModelPortal:P79733 SMR:P79733 STRING:P79733
PRIDE:P79733 Ensembl:ENSDART00000027851 Ensembl:ENSDART00000112155
GeneID:100330864 GeneID:30733 KEGG:dre:100330864 KEGG:dre:30733
CTD:6241 InParanoid:P79733 NextBio:20807081 Bgee:P79733
Uniprot:P79733
Length = 386
Score = 1153 (410.9 bits), Expect = 4.9e-117, P = 4.9e-117
Identities = 223/328 (67%), Positives = 259/328 (78%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
++ EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HW++L +E++
Sbjct: 63 AVEEEPLLKENPHRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWDSLKDEERY 122
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIK
Sbjct: 123 FISHVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIK 182
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
DS E+ LF+AIET+PCV KKA WALNWI D + + ER++AFA VEGIFFSGSF +IFW
Sbjct: 183 DSKEREFLFNAIETMPCVKKKADWALNWIGDKNARYGERVVAFAAVEGIFFSGSFASIFW 242
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEE VK ++ AVEIE+EF+
Sbjct: 243 LKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLINKPSEETVKKIIMNAVEIEQEFLT 302
Query: 242 DALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKR 301
DALP L+GMN +LM QYIEFVADR V NPFD+ME ISL+GKTNFFEKR
Sbjct: 303 DALPVKLIGMNCDLMKQYIEFVADRLLLELGFDKVYRVENPFDFMENISLEGKTNFFEKR 362
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
VGEYQ+ VMS N F +D DF
Sbjct: 363 VGEYQRMGVMSGTTDN----TFTLDADF 386
>MGI|MGI:98181 [details] [associations]
symbol:Rrm2 "ribonucleotide reductase M2" species:10090 "Mus
musculus" [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IDA;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005635 "nuclear
envelope" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0009262 "deoxyribonucleotide
metabolic process" evidence=IDA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0051259 "protein oligomerization" evidence=IPI]
[GO:0051290 "protein heterotetramerization" evidence=IPI]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
BRENDA:1.17.4.1 InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
MGI:MGI:98181 GO:GO:0006260 GO:GO:0046914 GO:GO:0051290
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
HOGENOM:HOG000255975 PANTHER:PTHR23409 HOVERGEN:HBG001647
OrthoDB:EOG4BCDN7 GeneTree:ENSGT00390000013305 OMA:YIADWRL CTD:6241
EMBL:M14223 EMBL:X15666 EMBL:AK088907 EMBL:AK142027 EMBL:AK147111
EMBL:AK161643 EMBL:AK167078 EMBL:AK167204 EMBL:AK168205
EMBL:AK168994 EMBL:BC085136 IPI:IPI00112645 PIR:S06735
RefSeq:NP_033130.1 UniGene:Mm.99 PDB:1AFT PDB:1H0N PDB:1H0O
PDB:1W68 PDB:1W69 PDB:1XSM PDBsum:1AFT PDBsum:1H0N PDBsum:1H0O
PDBsum:1W68 PDBsum:1W69 PDBsum:1XSM DisProt:DP00462
ProteinModelPortal:P11157 SMR:P11157 IntAct:P11157 STRING:P11157
PhosphoSite:P11157 PaxDb:P11157 PRIDE:P11157
Ensembl:ENSMUST00000020980 GeneID:20135 KEGG:mmu:20135
UCSC:uc007ner.2 InParanoid:P11157 BindingDB:P11157
ChEMBL:CHEMBL3527 ChiTaRS:RRM2 EvolutionaryTrace:P11157
NextBio:297647 Bgee:P11157 CleanEx:MM_RRM2 Genevestigator:P11157
GermOnline:ENSMUSG00000020649 Uniprot:P11157
Length = 390
Score = 1148 (409.2 bits), Expect = 1.6e-116, P = 1.6e-116
Identities = 221/329 (67%), Positives = 258/329 (78%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI E T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDPKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K +E+RV+ ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPAEQRVREIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFRVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMS+ N F +D DF
Sbjct: 366 RVGEYQRMGVMSNSTENS----FTLDADF 390
>UNIPROTKB|I3LUY0 [details] [associations]
symbol:RRM2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
OMA:YIADWRL Ensembl:ENSSSCT00000026922 Uniprot:I3LUY0
Length = 329
Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
Identities = 221/329 (67%), Positives = 258/329 (78%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE L +E+
Sbjct: 5 PSVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWETLKPEER 64
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 65 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 124
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI E T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 125 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 184
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 185 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLLHKPSEQRVKEIIVNAVRIEQEFL 244
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEK
Sbjct: 245 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFGKVFRVENPFDFMENISLEGKTNFFEK 304
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 305 RVGEYQRMGVMSSPTENS----FTLDADF 329
>UNIPROTKB|Q60561 [details] [associations]
symbol:RRM2 "Ribonucleoside-diphosphate reductase subunit
M2" species:10036 "Mesocricetus auratus" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326 GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
HOVERGEN:HBG001647 EMBL:X68127 PIR:S27153 ProteinModelPortal:Q60561
SMR:Q60561 Uniprot:Q60561
Length = 386
Score = 1143 (407.4 bits), Expect = 5.6e-116, P = 5.6e-116
Identities = 218/313 (69%), Positives = 253/313 (80%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWEAL DE+
Sbjct: 66 PSVEDEPLLRENPRRFVVFPIEYHDIWKMYKKAEASFWTAEEVDLSKDIQHWEALKPDER 125
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 126 HFISHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYI 185
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI E T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 186 KDSKEREYLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 245
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ AV IE+EF+
Sbjct: 246 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVQEIITNAVRIEQEFL 305
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEK
Sbjct: 306 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFNKIFKVENPFDFMENISLEGKTNFFEK 365
Query: 301 RVGEYQKASVMSS 313
RVGEYQ+ VMS+
Sbjct: 366 RVGEYQRMGVMSN 378
>UNIPROTKB|E1BXP4 [details] [associations]
symbol:RRM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0046914 "transition metal ion
binding" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0051290 "protein heterotetramerization"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
GO:GO:0051290 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 EMBL:AADN02018699 IPI:IPI00683731
Ensembl:ENSGALT00000026525 Uniprot:E1BXP4
Length = 388
Score = 1137 (405.3 bits), Expect = 2.4e-115, P = 2.4e-115
Identities = 222/325 (68%), Positives = 255/325 (78%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQY IW+MYKKAEASFWTAEEVDLS+DL+HWE+L +EK+F++
Sbjct: 68 EEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTAEEVDLSKDLQHWESLKPEEKYFIS 127
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQV EAR FYGFQIA+ENIHSEMYSLL++TYIKDS
Sbjct: 128 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKDSK 187
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+ LF+AIET+PCV KKA WA+ WI D T+ ER++AFA VEGIFFSGSF +IFWLKK
Sbjct: 188 EREFLFNAIETLPCVKKKADWAIRWIGDKKATYGERVVAFAAVEGIFFSGSFASIFWLKK 247
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERVK ++ AV IE+EF+ +AL
Sbjct: 248 RGLMPGLTFSNELISRDEGLHCDFACLMFKHLIRKPSEERVKEIIMNAVLIEQEFLTEAL 307
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEKRVGE
Sbjct: 308 PVKLIGMNCTLMKQYIEFVADRLMLELGFRKIYKVENPFDFMENISLEGKTNFFEKRVGE 367
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VMS N F +D +F
Sbjct: 368 YQRMGVMSKPTDNS----FTLDAEF 388
>UNIPROTKB|P31350 [details] [associations]
symbol:RRM2 "Ribonucleoside-diphosphate reductase subunit
M2" species:9606 "Homo sapiens" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS;NAS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000083 "regulation of transcription involved in G1/S phase of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055086 "nucleobase-containing
small molecule metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] Reactome:REACT_111217
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326 GO:GO:0005829
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0006260 GO:GO:0046914
GO:GO:0051290 GO:GO:0015949 GO:GO:0000083 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0009263 EMBL:AC104794 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975
PANTHER:PTHR23409 HOVERGEN:HBG001647 OrthoDB:EOG4BCDN7 OMA:YIADWRL
CTD:6241 EMBL:X59618 EMBL:S40301 EMBL:AY032750 EMBL:AK313719
EMBL:DA477511 EMBL:AC118058 EMBL:BC001886 EMBL:BC030154
IPI:IPI00946732 PIR:S25854 RefSeq:NP_001025.1 RefSeq:NP_001159403.1
UniGene:Hs.226390 PDB:2UW2 PDB:3OLJ PDBsum:2UW2 PDBsum:3OLJ
ProteinModelPortal:P31350 SMR:P31350 DIP:DIP-24232N IntAct:P31350
STRING:P31350 PhosphoSite:P31350 DMDM:400979 PaxDb:P31350
PRIDE:P31350 DNASU:6241 Ensembl:ENST00000304567
Ensembl:ENST00000360566 GeneID:6241 KEGG:hsa:6241 UCSC:uc021vdr.1
GeneCards:GC02P010262 HGNC:HGNC:10452 MIM:180390 neXtProt:NX_P31350
PharmGKB:PA299 InParanoid:P31350 BindingDB:P31350 ChEMBL:CHEMBL1954
EvolutionaryTrace:P31350 GenomeRNAi:6241 NextBio:24237
PMAP-CutDB:P31350 ArrayExpress:P31350 Bgee:P31350 CleanEx:HS_RRM2
Genevestigator:P31350 GermOnline:ENSG00000171848 Uniprot:P31350
Length = 389
Score = 1136 (405.0 bits), Expect = 3.1e-115, P = 3.1e-115
Identities = 219/329 (66%), Positives = 257/329 (78%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI E T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 304
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>UNIPROTKB|Q4R7Q7 [details] [associations]
symbol:RRM2 "Ribonucleoside-diphosphate reductase subunit
M2" species:9541 "Macaca fascicularis" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326 GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
HOVERGEN:HBG001647 EMBL:AB168758 ProteinModelPortal:Q4R7Q7
SMR:Q4R7Q7 Uniprot:Q4R7Q7
Length = 389
Score = 1135 (404.6 bits), Expect = 3.9e-115, P = 3.9e-115
Identities = 218/329 (66%), Positives = 257/329 (78%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 65 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 124
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 125 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 184
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI E T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 185 KDPKEREFLFNAIETMPCVEKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 244
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV +E+EF+
Sbjct: 245 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRVEQEFL 304
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEK
Sbjct: 305 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 364
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 365 RVGEYQRMGVMSSPTENS----FTLDADF 389
>UNIPROTKB|F1P0T9 [details] [associations]
symbol:RRM2B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0046914 "transition metal ion
binding" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0003014 "renal system process" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0009200
"deoxyribonucleoside triphosphate metabolic process" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0005739
GO:GO:0005634 GO:GO:0043066 GO:GO:0006979 GO:GO:0006281
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0006264
GO:GO:0009263 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
PANTHER:PTHR23409 GO:GO:0009200 GeneTree:ENSGT00390000013305
OMA:CLMFHYL EMBL:AADN02023141 EMBL:AADN02023142 EMBL:AADN02023143
EMBL:AADN02023144 EMBL:AADN02023145 IPI:IPI00591476
Ensembl:ENSGALT00000025855 Uniprot:F1P0T9
Length = 326
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 218/325 (67%), Positives = 256/325 (78%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL NP RF +FPIQ+P IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 6 EEPLLRKNPRRFVIFPIQHPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 65
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IEN+HSEMYSLL++TYIKD +
Sbjct: 66 HVLAFFAASDGIVNENLVARFSQEVQIPEARCFYGFQILIENVHSEMYSLLIDTYIKDPE 125
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
+++ LF+AIET+PCV KKA WAL WI+ E TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 126 KRDFLFNAIETMPCVKKKADWALKWIEDRESTFGERVVAFAAVEGIFFSGSFAAIFWLKK 185
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L + SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 186 RGLMPGLTFSNELISRDEGLHCDFACLMFHYLVNRPSEERVREIIVNAVEIEQEFLTEAL 245
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 246 PVGLIGMNCTLMKQYIEFVADRLLMELGFSKVFHAENPFDFMENISLEGKTNFFEKRVSE 305
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 306 YQRFAVMAETMDN----VFTLDADF 326
>UNIPROTKB|E1BFQ8 [details] [associations]
symbol:RRM2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0009200 "deoxyribonucleoside
triphosphate metabolic process" evidence=IEA] [GO:0006979 "response
to oxidative stress" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0003014 "renal system
process" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0005739 GO:GO:0005634
GO:GO:0043066 GO:GO:0006979 GO:GO:0006281 GO:GO:0046914
GO:GO:0001822 GO:GO:0003014 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0006264 GO:GO:0009263 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409 CTD:50484
GO:GO:0009200 GeneTree:ENSGT00390000013305 OMA:CLMFHYL
EMBL:DAAA02039335 IPI:IPI00693331 RefSeq:XP_002692807.1
RefSeq:XP_607398.4 UniGene:Bt.92170 ProteinModelPortal:E1BFQ8
Ensembl:ENSBTAT00000028260 GeneID:528960 KEGG:bta:528960
NextBio:20874933 Uniprot:E1BFQ8
Length = 351
Score = 1108 (395.1 bits), Expect = 2.9e-112, P = 2.9e-112
Identities = 215/325 (66%), Positives = 251/325 (77%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYKKA+ASFWTAEEVDLS+DL HW L ++EK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKKAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>UNIPROTKB|E2RQ55 [details] [associations]
symbol:RRM2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=IEA] [GO:0009200
"deoxyribonucleoside triphosphate metabolic process" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006264 "mitochondrial
DNA replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0003014 "renal
system process" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0005739 GO:GO:0005634
GO:GO:0043066 GO:GO:0006979 GO:GO:0006281 GO:GO:0046914
GO:GO:0001822 GO:GO:0003014 SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0006264 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GO:GO:0009200
GeneTree:ENSGT00390000013305 OMA:CLMFHYL EMBL:AAEX03008693
Ensembl:ENSCAFT00000000935 NextBio:20856684 Uniprot:E2RQ55
Length = 440
Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
Identities = 215/325 (66%), Positives = 251/325 (77%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 120 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 179
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 180 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 239
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 240 KREFLFNAIETMPYVKKKADWALRWIEDRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 299
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AVEIE+EF+ +AL
Sbjct: 300 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVNAVEIEQEFLTEAL 359
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 360 PVGLIGMNCVLMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVAE 419
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 420 YQRFAVMAETTDN----VFTLDADF 440
>UNIPROTKB|H0YAV1 [details] [associations]
symbol:RRM2B "Ribonucleoside-diphosphate reductase subunit
M2 B" species:9606 "Homo sapiens" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 EMBL:AP001328 EMBL:AP002907
HGNC:HGNC:17296 ChiTaRS:RRM2B OMA:CLMFHYL Ensembl:ENST00000522368
Uniprot:H0YAV1
Length = 408
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 214/325 (65%), Positives = 252/325 (77%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 88 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 147
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 148 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 207
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 208 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 267
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 268 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 327
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 328 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 387
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 388 YQRFAVMAETTDN----VFTLDADF 408
>UNIPROTKB|Q7LG56 [details] [associations]
symbol:RRM2B "Ribonucleoside-diphosphate reductase subunit
M2 B" species:9606 "Homo sapiens" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0001822 "kidney development" evidence=IEA] [GO:0003014 "renal
system process" evidence=IEA] [GO:0006264 "mitochondrial DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0009200 "deoxyribonucleoside triphosphate metabolic process"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055086 "nucleobase-containing
small molecule metabolic process" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] BRENDA:1.17.4.1
Reactome:REACT_111217 InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0005739 GO:GO:0043066 GO:GO:0005654 GO:GO:0006979
GO:GO:0006281 GO:GO:0046914 GO:GO:0001822 GO:GO:0015949
GO:GO:0003014 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
GO:GO:0006264 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409 EMBL:AB036063
EMBL:AB036532 EMBL:AB163437 EMBL:AB163438 EMBL:AB166669
EMBL:AB166670 EMBL:AB166671 EMBL:AK001965 EMBL:AL137348
EMBL:DQ027001 EMBL:AP001328 EMBL:AP002907 EMBL:BC042468
EMBL:BC108261 EMBL:BC117496 EMBL:BC130628 IPI:IPI00100213
IPI:IPI00438859 IPI:IPI00438860 IPI:IPI00735900 IPI:IPI00741117
PIR:T46249 RefSeq:NP_001165948.1 RefSeq:NP_001165949.1
RefSeq:NP_056528.2 UniGene:Hs.512592 PDB:2VUX PDB:3HF1 PDB:4DJN
PDBsum:2VUX PDBsum:3HF1 PDBsum:4DJN ProteinModelPortal:Q7LG56
SMR:Q7LG56 DIP:DIP-24264N DIP:DIP-48627N STRING:Q7LG56
PhosphoSite:Q7LG56 DMDM:74727333 PaxDb:Q7LG56 PRIDE:Q7LG56
DNASU:50484 Ensembl:ENST00000251810 Ensembl:ENST00000395912
Ensembl:ENST00000519317 Ensembl:ENST00000519962
Ensembl:ENST00000522394 GeneID:50484 KEGG:hsa:50484 UCSC:uc003ykn.3
UCSC:uc010mbv.2 UCSC:uc010mbw.1 CTD:50484 GeneCards:GC08M103216
HGNC:HGNC:17296 HPA:CAB006854 HPA:HPA028812 MIM:604712 MIM:612075
MIM:613077 neXtProt:NX_Q7LG56 PharmGKB:PA34866 HOVERGEN:HBG001647
InParanoid:Q7LG56 OrthoDB:EOG4BCDN7 BindingDB:Q7LG56
ChEMBL:CHEMBL1896 ChiTaRS:RRM2B EvolutionaryTrace:Q7LG56
GenomeRNAi:50484 NextBio:53036 ArrayExpress:Q7LG56 Bgee:Q7LG56
Genevestigator:Q7LG56 GermOnline:ENSG00000048392 GO:GO:0009200
Uniprot:Q7LG56
Length = 351
Score = 1106 (394.4 bits), Expect = 4.6e-112, P = 4.6e-112
Identities = 214/325 (65%), Positives = 252/325 (77%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ADEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKADEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEG+FFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGVFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVREIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCILMKQYIEFVADRLLVELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>ZFIN|ZDB-GENE-030616-614 [details] [associations]
symbol:rrm2b "ribonucleotide reductase M2 b"
species:7955 "Danio rerio" [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
ZFIN:ZDB-GENE-030616-614 GO:GO:0005737 GO:GO:0046914 GO:GO:0006974
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 CTD:50484 HOVERGEN:HBG001647
GeneTree:ENSGT00390000013305 OMA:CLMFHYL EMBL:AL807244
IPI:IPI00505831 RefSeq:NP_001007164.1 UniGene:Dr.51831 SMR:Q7ZYW0
Ensembl:ENSDART00000050750 Ensembl:ENSDART00000141404 GeneID:368909
KEGG:dre:368909 InParanoid:Q7ZYW0 NextBio:20813259 Uniprot:Q7ZYW0
Length = 349
Score = 1105 (394.0 bits), Expect = 5.9e-112, P = 5.9e-112
Identities = 210/328 (64%), Positives = 256/328 (78%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKH 62
S+ +EPLL NP RF +FPIQYP IW+MYK+A+ASFWT EEVDLS+DL HW+ L ++EKH
Sbjct: 26 SVEDEPLLRENPKRFVIFPIQYPDIWKMYKQAQASFWTVEEVDLSKDLTHWDGLKSEEKH 85
Query: 63 FVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIK 122
F++HVLAFFAASDGIV ENL RF EVQ+ EAR+FYGFQI IEN+HSEMYS+L+ TYI+
Sbjct: 86 FISHVLAFFAASDGIVNENLVQRFSQEVQLPEARSFYGFQILIENVHSEMYSMLINTYIR 145
Query: 123 DSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFW 181
D E++ LF+A++T+PCV +KA WAL WI D + TF ERL+AFA VEGIFFSGSF AI+W
Sbjct: 146 DLKERDYLFNAVQTMPCVRRKADWALQWISDTNSTFGERLVAFAAVEGIFFSGSFAAIYW 205
Query: 182 LKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVC 241
LKKRGLMPGLT+SNELISRDEGLHC+FACL+YS L K S +RV ++ +AV IE+EF+
Sbjct: 206 LKKRGLMPGLTYSNELISRDEGLHCNFACLIYSYLVKKPSVDRVNDIIAKAVSIEQEFLT 265
Query: 242 DALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKR 301
+ALP L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKR
Sbjct: 266 EALPVNLIGMNCSLMKQYIEFVADRLLTDLGLPKAYCSENPFDFMESISLEGKTNFFEKR 325
Query: 302 VGEYQKASVMSSLNGNGGNHVFKIDEDF 329
V EYQ+ VMS++ + F +D DF
Sbjct: 326 VAEYQRLGVMSNVK----DCEFTLDADF 349
>MGI|MGI:2155865 [details] [associations]
symbol:Rrm2b "ribonucleotide reductase M2 B (TP53
inducible)" species:10090 "Mus musculus" [GO:0001822 "kidney
development" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IC] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006264
"mitochondrial DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0009200 "deoxyribonucleoside
triphosphate metabolic process" evidence=IMP] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IDA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046914
"transition metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IDA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 MGI:MGI:2155865 GO:GO:0005739 GO:GO:0005634
GO:GO:0043066 GO:GO:0006979 GO:GO:0006281 GO:GO:0046914
GO:GO:0001822 GO:GO:0003014 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0006264 GO:GO:0009263 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975
PANTHER:PTHR23409 CTD:50484 HOVERGEN:HBG001647 OrthoDB:EOG4BCDN7
GO:GO:0009200 EMBL:AK138731 EMBL:BC058103 IPI:IPI00399462
RefSeq:NP_955770.1 UniGene:Mm.24738 ProteinModelPortal:Q6PEE3
SMR:Q6PEE3 STRING:Q6PEE3 PhosphoSite:Q6PEE3 PaxDb:Q6PEE3
PRIDE:Q6PEE3 Ensembl:ENSMUST00000022901 GeneID:382985
KEGG:mmu:382985 UCSC:uc007vnl.1 GeneTree:ENSGT00390000013305
InParanoid:Q6PEE3 OMA:CLMFHYL NextBio:403612 Bgee:Q6PEE3
CleanEx:MM_RRM2B Genevestigator:Q6PEE3
GermOnline:ENSMUSG00000022292 Uniprot:Q6PEE3
Length = 351
Score = 1103 (393.3 bits), Expect = 9.7e-112, P = 9.7e-112
Identities = 213/325 (65%), Positives = 251/325 (77%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWRMYKQAQASFWTAEEVDLSKDLPHWNKLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RV+ ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEDRVREIIADAVQIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>UNIPROTKB|F1S0R3 [details] [associations]
symbol:RRM2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IEA] [GO:0009200 "deoxyribonucleoside
triphosphate metabolic process" evidence=IEA] [GO:0006979 "response
to oxidative stress" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0003014 "renal system
process" evidence=IEA] [GO:0001822 "kidney development"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0005739 GO:GO:0005634
GO:GO:0043066 GO:GO:0006979 GO:GO:0006281 GO:GO:0046914
GO:GO:0001822 GO:GO:0003014 SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0006264 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GO:GO:0009200
GeneTree:ENSGT00390000013305 OMA:CLMFHYL EMBL:CU207279
Ensembl:ENSSSCT00000006647 Uniprot:F1S0R3
Length = 351
Score = 1102 (393.0 bits), Expect = 1.2e-111, P = 1.2e-111
Identities = 214/325 (65%), Positives = 250/325 (76%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L +DEK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNRLKSDEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 QREFLFNAIETMPYVKKKADWALRWIADRKATFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SE RV+ ++ AVEIE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEARVREIIVNAVEIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLTELGFSKVFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>DICTYBASE|DDB_G0274021 [details] [associations]
symbol:rnrB-2 "ribonucleoside-diphosphate reductase"
species:44689 "Dictyostelium discoideum" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;ISS] [GO:0006260 "DNA
replication" evidence=IEA;ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0042493 "response to drug" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 dictyBase:DDB_G0274021 dictyBase:DDB_G0272616
GO:GO:0005634 GO:GO:0042493 GO:GO:0006260 GO:GO:0046914
GenomeReviews:CM000151_GR EMBL:AAFI02000011 EMBL:AAFI02000009
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
OMA:ICNRRCQ EMBL:L36941 RefSeq:XP_644369.1 RefSeq:XP_645045.1
ProteinModelPortal:P42521 SMR:P42521 STRING:P42521 PRIDE:P42521
EnsemblProtists:DDB0185062 EnsemblProtists:DDB0238222
GeneID:8618721 GeneID:8619255 KEGG:ddi:DDB_G0272616
KEGG:ddi:DDB_G0274021 ProtClustDB:PTZ00211 Uniprot:P42521
Length = 338
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 208/327 (63%), Positives = 250/327 (76%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI+YP IW MYKKA AS W AEE+DL D WE LT +E+HF++
Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA RFM+EVQ+ EAR FYGFQIAIENIHSE YSLL+ETYIKD
Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K++LF+AIET+PC+ KKA WAL WI+ S++FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLM GLTFSNELISRDEGLHCDFACLLY+ L+ KL + ++ ++++AVE E+EF+C++LP
Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251
Query: 246 CALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN MSQYIEF ADR +NPF+WME+ISLQ K+NFFE +V EY
Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVAEY 311
Query: 306 QKASVMSSLNG---NGGNHVFKIDEDF 329
K V N N + +DEDF
Sbjct: 312 AKTGVAIQGNNQQKNNQSRTLVLDEDF 338
>DICTYBASE|DDB_G0272616 [details] [associations]
symbol:rnrB-1 "ribonucleoside-diphosphate reductase"
species:44689 "Dictyostelium discoideum" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;ISS] [GO:0006260 "DNA
replication" evidence=IEA;ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0042493 "response to drug" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 dictyBase:DDB_G0274021 dictyBase:DDB_G0272616
GO:GO:0005634 GO:GO:0042493 GO:GO:0006260 GO:GO:0046914
GenomeReviews:CM000151_GR EMBL:AAFI02000011 EMBL:AAFI02000009
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
OMA:ICNRRCQ EMBL:L36941 RefSeq:XP_644369.1 RefSeq:XP_645045.1
ProteinModelPortal:P42521 SMR:P42521 STRING:P42521 PRIDE:P42521
EnsemblProtists:DDB0185062 EnsemblProtists:DDB0238222
GeneID:8618721 GeneID:8619255 KEGG:ddi:DDB_G0272616
KEGG:ddi:DDB_G0274021 ProtClustDB:PTZ00211 Uniprot:P42521
Length = 338
Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
Identities = 208/327 (63%), Positives = 250/327 (76%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EP+L N DRF +FPI+YP IW MYKKA AS W AEE+DL D WE LT +E+HF++
Sbjct: 12 EPILKENKDRFVLFPIKYPDIWRMYKKALASHWVAEEIDLGNDNVDWEYKLTDNERHFIS 71
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVLAFFAASDGIV ENLA RFM+EVQ+ EAR FYGFQIAIENIHSE YSLL+ETYIKD
Sbjct: 72 HVLAFFAASDGIVNENLATRFMSEVQIPEARCFYGFQIAIENIHSETYSLLIETYIKDKQ 131
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
K++LF+AIET+PC+ KKA WAL WI+ S++FAERL+AFA VEGIFFSGSFC+IFWLKKR
Sbjct: 132 TKDKLFNAIETIPCIKKKAEWALRWINDSDSFAERLVAFAAVEGIFFSGSFCSIFWLKKR 191
Query: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALP 245
GLM GLTFSNELISRDEGLHCDFACLLY+ L+ KL + ++ ++++AVE E+EF+C++LP
Sbjct: 192 GLMQGLTFSNELISRDEGLHCDFACLLYTKLQRKLDPKVIEKMIRDAVECEKEFICESLP 251
Query: 246 CALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGEY 305
L+GMN MSQYIEF ADR +NPF+WME+ISLQ K+NFFE +V EY
Sbjct: 252 VDLIGMNSRSMSQYIEFCADRLVVSLGYKKIFNSSNPFEWMEMISLQRKSNFFEGKVAEY 311
Query: 306 QKASVMSSLNG---NGGNHVFKIDEDF 329
K V N N + +DEDF
Sbjct: 312 AKTGVAIQGNNQQKNNQSRTLVLDEDF 338
>UNIPROTKB|E2R7H9 [details] [associations]
symbol:RRM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 OMA:YIADWRL EMBL:AAEX03010710
Ensembl:ENSCAFT00000005482 Uniprot:E2R7H9
Length = 381
Score = 1099 (391.9 bits), Expect = 2.6e-111, P = 2.6e-111
Identities = 210/303 (69%), Positives = 244/303 (80%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS EEPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 70 PSAEEEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 129
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 130 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 189
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
KDS E+ LF+AIET+PCV KKA WAL WI E T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 190 KDSKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 249
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SE+RVK ++ AV IE+EF+
Sbjct: 250 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEQRVKEIIINAVRIEQEFL 309
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ALP L+GMN LM QYIEFVADR V NPFD+ME ISL+GKTNFFEK
Sbjct: 310 TEALPVKLIGMNCTLMKQYIEFVADRLMLELGFSKVFRVENPFDFMENISLEGKTNFFEK 369
Query: 301 RVG 303
RVG
Sbjct: 370 RVG 372
>RGD|1306045 [details] [associations]
symbol:Rrm2b "ribonucleotide reductase M2 B (TP53 inducible)"
species:10116 "Rattus norvegicus" [GO:0001822 "kidney development"
evidence=ISO] [GO:0003014 "renal system process" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006264
"mitochondrial DNA replication" evidence=ISO] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0009200 "deoxyribonucleoside triphosphate
metabolic process" evidence=ISO] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=ISO] [GO:0014075 "response to amine
stimulus" evidence=IEP] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0055114 "oxidation-reduction
process" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
REFSEQ:NM_001130543 Ncbi:NP_001124015
Length = 351
Score = 1098 (391.6 bits), Expect = 3.3e-111, P = 3.3e-111
Identities = 213/325 (65%), Positives = 251/325 (77%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEVDLS+DL HW L ++EK+F++
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVDLSKDLPHWNKLKSEEKYFIS 90
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
H+LAFFAASDGIV ENL RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 91 HILAFFAASDGIVNENLVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 150
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 151 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 210
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV ++ +AV+IE+EF+ +AL
Sbjct: 211 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVMEIIVDAVKIEQEFLTEAL 270
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 271 PVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 330
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 331 YQRFAVMAETTDN----VFTLDADF 351
>GENEDB_PFALCIPARUM|PF14_0053 [details] [associations]
symbol:PF14_0053 "ribonucleotide reductase
small subunit" species:5833 "Plasmodium falciparum" [GO:0006260
"DNA replication" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0006260
GO:GO:0046914 EMBL:AE014187 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
HOGENOM:HOG000255975 PANTHER:PTHR23409 OMA:ICNRRCQ
ProtClustDB:PTZ00211 HSSP:P11157 RefSeq:XP_001348226.1
ProteinModelPortal:Q8IM38 SMR:Q8IM38 PRIDE:Q8IM38
EnsemblProtists:PF14_0053:mRNA GeneID:811635 KEGG:pfa:PF14_0053
EuPathDB:PlasmoDB:PF3D7_1405600 Uniprot:Q8IM38
Length = 349
Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
Identities = 201/323 (62%), Positives = 245/323 (75%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL E+ V+ +VKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADR NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ + VF ++ +F
Sbjct: 331 KSGVMAQRK----DQVFCLNTEF 349
>UNIPROTKB|Q8IM38 [details] [associations]
symbol:PF14_0053 "Ribonucleotide reductase small subunit"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006260 "DNA replication"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0006260
GO:GO:0046914 EMBL:AE014187 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
HOGENOM:HOG000255975 PANTHER:PTHR23409 OMA:ICNRRCQ
ProtClustDB:PTZ00211 HSSP:P11157 RefSeq:XP_001348226.1
ProteinModelPortal:Q8IM38 SMR:Q8IM38 PRIDE:Q8IM38
EnsemblProtists:PF14_0053:mRNA GeneID:811635 KEGG:pfa:PF14_0053
EuPathDB:PlasmoDB:PF3D7_1405600 Uniprot:Q8IM38
Length = 349
Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
Identities = 201/323 (62%), Positives = 245/323 (75%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
E +L DRF ++PI YP +W+ YKKAEASFWTAEE+DLS DL+ +E L +EKHF+ H
Sbjct: 31 EKILNKESDRFTLYPILYPDVWDFYKKAEASFWTAEEIDLSSDLKDFEKLNENEKHFIKH 90
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
VLAFFAASDGIVLENLA +F+ EVQ+ EA+ FY FQIA+ENIHSE YSLL++ YIKD E
Sbjct: 91 VLAFFAASDGIVLENLASKFLREVQITEAKKFYSFQIAVENIHSETYSLLIDNYIKDEKE 150
Query: 127 KNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
+ LFHAIE +P V KA WA WI+ + +FAER++A ACVEGI FSGSFCAIFW KK+
Sbjct: 151 RLNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANACVEGILFSGSFCAIFWFKKQN 210
Query: 187 LMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDALPC 246
+ GLTFSNELISRDEGLH DF CL+YSLL KL E+ V+ +VKEAVE+ER F+C++LPC
Sbjct: 211 KLHGLTFSNELISRDEGLHTDFNCLIYSLLDNKLPEQMVQNIVKEAVEVERSFICESLPC 270
Query: 247 ALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGEYQ 306
L+GMN LMSQYIEFVADR NPF+WM+LISLQGKTNFFEKRV +YQ
Sbjct: 271 DLIGMNSRLMSQYIEFVADRLLECLGCSKIFHSKNPFNWMDLISLQGKTNFFEKRVADYQ 330
Query: 307 KASVMSSLNGNGGNHVFKIDEDF 329
K+ VM+ + VF ++ +F
Sbjct: 331 KSGVMAQRK----DQVFCLNTEF 349
>FB|FBgn0011704 [details] [associations]
symbol:RnrS "Ribonucleoside diphosphate reductase small
subunit" species:7227 "Drosophila melanogaster" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS;NAS]
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0006260 "DNA
replication" evidence=NAS] [GO:0009186 "deoxyribonucleoside
diphosphate metabolic process" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046914 "transition
metal ion binding" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326 EMBL:AE013599
GO:GO:0022008 GO:GO:0006260 GO:GO:0046914 GO:GO:0006919
SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 OMA:ICNRRCQ EMBL:AY051936 EMBL:U09370
RefSeq:NP_525111.1 UniGene:Dm.569 ProteinModelPortal:P48592
SMR:P48592 DIP:DIP-18112N IntAct:P48592 MINT:MINT-336377
STRING:P48592 PaxDb:P48592 EnsemblMetazoa:FBtr0088046 GeneID:36280
KEGG:dme:Dmel_CG8975 CTD:36280 FlyBase:FBgn0011704
InParanoid:P48592 OrthoDB:EOG47H45H PhylomeDB:P48592 ChiTaRS:RnrS
GenomeRNAi:36280 NextBio:797712 Bgee:P48592 GermOnline:CG8975
Uniprot:P48592
Length = 393
Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
Identities = 209/329 (63%), Positives = 252/329 (76%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ EPLL NP RF +FPIQY IW+MYKKAEASFWT EEVDLS+DL W L DE+
Sbjct: 71 PSL--EPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWHRLKDDER 128
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
HF++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+EN+HSEMYS+L++TYI
Sbjct: 129 HFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYI 188
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDG-SETFAERLIAFACVEGIFFSGSFCAIF 180
+D ++ LF+AIET+P V +KA WAL+WI S F ER+IAFA VEGIFFSGSF +IF
Sbjct: 189 RDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIF 248
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFA L++ L + ER+ ++++AV IE+EF+
Sbjct: 249 WLKKRGLMPGLTFSNELISRDEGLHCDFAVLMFQHLVQRPKRERIIEIIRDAVAIEQEFL 308
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
DALP L+GMN +LMSQYIEFVADR NPF++ME+ISL GKTNFFEK
Sbjct: 309 TDALPVNLIGMNCDLMSQYIEFVADRLLVELGVGKIYNTKNPFNFMEMISLDGKTNFFEK 368
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
+VGEYQ+ V+S N ++VF +D DF
Sbjct: 369 KVGEYQRMGVVS----NPLDNVFTLDADF 393
>ASPGD|ASPL0000055511 [details] [associations]
symbol:AN0067 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009186
"deoxyribonucleoside diphosphate metabolic process" evidence=IEA]
[GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 EMBL:BN001308
GO:GO:0046914 EMBL:AACD01000003 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409 OMA:ICNRRCQ
OrthoDB:EOG4QZBVT RefSeq:XP_657671.1 ProteinModelPortal:Q5BHB3
SMR:Q5BHB3 STRING:Q5BHB3 EnsemblFungi:CADANIAT00002685
GeneID:2875837 KEGG:ani:AN0067.2 Uniprot:Q5BHB3
Length = 406
Score = 1074 (383.1 bits), Expect = 1.1e-108, P = 1.1e-108
Identities = 206/309 (66%), Positives = 244/309 (78%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL NP RF +FPI+Y +IW+MYKKAEASFWTAEE+DLS+DL W L DE++F++
Sbjct: 74 EPLLQENPHRFVLFPIKYHEIWQMYKKAEASFWTAEEIDLSKDLHDWNNRLNEDERYFIS 133
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL RF EVQ+ EAR FYGFQI IENIH+E YSLL++TYIK+
Sbjct: 134 RVLAFFAASDGIVNENLLERFSGEVQIPEARCFYGFQIMIENIHAETYSLLIDTYIKEPK 193
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF AI+T+PC+ KKA WA+ WI E TFA+RL+AFA VEGIFFSGSF +IFWLKK
Sbjct: 194 QRTYLFDAIDTIPCIRKKADWAIKWIQDKESTFAQRLVAFAAVEGIFFSGSFASIFWLKK 253
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLH DFACLL+S L + S++ V+ ++ EAV IE+EF+ DAL
Sbjct: 254 RGLMPGLTFSNELISRDEGLHTDFACLLFSHLNWRPSKKVVEDIIVEAVAIEKEFLTDAL 313
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
PCAL+GMN +LM QYIEFVADR NPFD+ME ISL GKTNFFEKRVG+
Sbjct: 314 PCALLGMNAKLMCQYIEFVADRLLVALGNKKYFNATNPFDFMESISLAGKTNFFEKRVGD 373
Query: 305 YQKASVMSS 313
YQKA VM+S
Sbjct: 374 YQKAGVMAS 382
>CGD|CAL0002245 [details] [associations]
symbol:RNR21 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 CGD:CAL0002245
GO:GO:0046914 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
EMBL:AACQ01000088 EMBL:AACQ01000087 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409
RefSeq:XP_715277.1 RefSeq:XP_715342.1 ProteinModelPortal:Q5A0L0
SMR:Q5A0L0 STRING:Q5A0L0 GeneID:3643021 GeneID:3643095
KEGG:cal:CaO19.13223 KEGG:cal:CaO19.5801 Uniprot:Q5A0L0
Length = 413
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 202/326 (61%), Positives = 242/326 (74%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL N R+ MFPI+Y +IW YKKAEASFWTAEE+DLS+DL W L +E++F+
Sbjct: 89 EEPLLVENKRRYVMFPIRYHEIWNFYKKAEASFWTAEEIDLSKDLDDWNNKLNENERYFI 148
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI +ENIHSE YSLL+ETYIKD
Sbjct: 149 SRVLAFFAASDGIVGENLIENFSTEVQLPEAKSFYGFQIMMENIHSETYSLLIETYIKDP 208
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
E + LF+AI +PC+ KKA WA+ WI E + ERL+AFA VEGIFFSGSF +IFWLK
Sbjct: 209 QEADYLFNAIANIPCIQKKADWAIKWIQDDEALYGERLVAFAAVEGIFFSGSFASIFWLK 268
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACLL++ L+ + S E V+ ++ EAV++E+E+ DA
Sbjct: 269 KRGLMPGLTFSNELICRDEGLHTDFACLLFAHLQNRPSPEIVERIITEAVDVEKEYFTDA 328
Query: 244 LPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN LM QYIEFVADR V NPFD+ME ISL GKTNFFEKRV
Sbjct: 329 LPVSLLGMNCNLMCQYIEFVADRLLLALGNKKVYNVTNPFDFMENISLAGKTNFFEKRVS 388
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKA VM+ + F DEDF
Sbjct: 389 DYQKAGVMAKTENKEAD-AFTFDEDF 413
>POMBASE|SPBC25D12.04 [details] [associations]
symbol:suc22 "ribonucleotide reductase small subunit
Suc22" species:4896 "Schizosaccharomyces pombe" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0006213 "pyrimidine nucleoside metabolic process"
evidence=IC] [GO:0007090 "regulation of S phase of mitotic cell
cycle" evidence=IC] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0009212 "pyrimidine
deoxyribonucleoside triphosphate biosynthetic process" evidence=IC]
[GO:0009216 "purine deoxyribonucleoside triphosphate biosynthetic
process" evidence=IC] [GO:0042278 "purine nucleoside metabolic
process" evidence=IC] [GO:0046914 "transition metal ion binding"
evidence=IEA] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=TAS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
PomBase:SPBC25D12.04 GO:GO:0005829 GO:GO:0005634 GO:GO:0006260
EMBL:CU329671 GO:GO:0046914 GenomeReviews:CU329671_GR
SUPFAM:SSF47240 GO:GO:0007090 KO:K10808 GO:GO:0090329
Gene3D:1.10.620.20 GO:GO:0006213 GO:GO:0042278 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 GO:GO:0009216 GO:GO:0009212
eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409 OMA:LEPMFLG
EMBL:X65115 PIR:S34808 PIR:T39992 RefSeq:NP_596546.1
ProteinModelPortal:P36603 SMR:P36603 STRING:P36603 PRIDE:P36603
EnsemblFungi:SPBC25D12.04.1 GeneID:2540381 KEGG:spo:SPBC25D12.04
OrthoDB:EOG4QZBVT NextBio:20801509 Uniprot:P36603
Length = 391
Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
Identities = 203/327 (62%), Positives = 245/327 (74%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
+E +L PNP RF +FPI+Y +IW+ YKKAEASFWTAEE+DLS+DL W+ L ADE++F+
Sbjct: 65 DEVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWDNKLNADERYFI 124
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLA+FAASDGIV ENL RF +EVQ+ EAR YGFQI IENIHSE YSLLL+TYI++
Sbjct: 125 STVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETYSLLLDTYIREP 184
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
EK R F AI T+ + KA WAL WI D T+A RL+AFA VEGIFFSGSF +IFWLK
Sbjct: 185 KEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFFSGSFASIFWLK 244
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRGLMPGLTFSNELI RDEGLH DFACL++S L+ + + V+A++ EAV+IE+E+ DA
Sbjct: 245 KRGLMPGLTFSNELICRDEGLHTDFACLMFSHLKHRPGRKVVEAIIVEAVDIEKEYFTDA 304
Query: 244 LPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVG 303
LP +L+GMN +LM QYIEFVADR V NPFD+ME ISL GKTNFFEK+V
Sbjct: 305 LPVSLLGMNKDLMCQYIEFVADRLLVALGNDKYYNVTNPFDFMENISLAGKTNFFEKKVS 364
Query: 304 EYQKASVMSSLN-GNGGNHVFKIDEDF 329
+YQ A VMS +H F IDEDF
Sbjct: 365 DYQIAGVMSGTKRAEKDDHTFTIDEDF 391
>WB|WBGene00004392 [details] [associations]
symbol:rnr-2 species:6239 "Caenorhabditis elegans"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0030728
"ovulation" evidence=IMP] [GO:0007276 "gamete generation"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 GO:GO:0030728
GO:GO:0006260 GO:GO:0046914 GO:GO:0040035 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 EMBL:Z35637 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 PIR:T18876 RefSeq:NP_497821.1
ProteinModelPortal:P42170 SMR:P42170 DIP:DIP-24490N IntAct:P42170
MINT:MINT-1055286 STRING:P42170 PaxDb:P42170 PRIDE:P42170
EnsemblMetazoa:C03C10.3.1 EnsemblMetazoa:C03C10.3.2 GeneID:175525
KEGG:cel:CELE_C03C10.3 UCSC:C03C10.3.1 CTD:175525 WormBase:C03C10.3
InParanoid:P42170 OMA:ICNRRCQ NextBio:888524 Uniprot:P42170
Length = 381
Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
Identities = 197/325 (60%), Positives = 240/325 (73%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+EP+L +RF +FP+++ IW YKKA ASFWT EEVDL +D+ WE + DE++F++
Sbjct: 61 DEPMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFIS 120
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
+LAFFAASDGIV ENL RF EVQV+EAR FYGFQIAIENIHSEMYS L+ETYI+D
Sbjct: 121 RILAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDET 180
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
E+N LF+A++ + KKA WAL WI D +FAERLIAFA VEGIFFSGSF +IFWLKK
Sbjct: 181 ERNTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKK 240
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLT SNELISRDEGLH DFACLLYS L+ KL+++R+ ++K+AV IE+EF+ +AL
Sbjct: 241 RGLMPGLTHSNELISRDEGLHRDFACLLYSKLQKKLTQQRIYDIIKDAVAIEQEFLTEAL 300
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P ++GMN LMSQYIEFVAD NPFD+ME IS+ GKTNFFEKRV E
Sbjct: 301 PVDMIGMNCRLMSQYIEFVADHLLVELGCDKLYKSKNPFDFMENISIDGKTNFFEKRVSE 360
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ VM N F ++ DF
Sbjct: 361 YQRPGVMV----NEAERQFDLEADF 381
>SGD|S000003563 [details] [associations]
symbol:RNR2 "Ribonucleotide-diphosphate reductase (RNR)"
species:4932 "Saccharomyces cerevisiae" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IDA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0009263 "deoxyribonucleotide
biosynthetic process" evidence=IDA] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 SGD:S000003563 GO:GO:0005634 EMBL:BK006943
GO:GO:0006260 GO:GO:0046914 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PDB:2CVY PDBsum:2CVY eggNOG:COG0208
HOGENOM:HOG000255975 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
OMA:ICNRRCQ OrthoDB:EOG4QZBVT EMBL:M17221 EMBL:M17789 EMBL:Z49301
PIR:A26916 RefSeq:NP_012508.1 PDB:1JK0 PDB:1SMQ PDBsum:1JK0
PDBsum:1SMQ DisProt:DP00487 ProteinModelPortal:P09938 SMR:P09938
DIP:DIP-5671N IntAct:P09938 MINT:MINT-547064 STRING:P09938
PaxDb:P09938 PeptideAtlas:P09938 EnsemblFungi:YJL026W GeneID:853427
KEGG:sce:YJL026W CYGD:YJL026w EvolutionaryTrace:P09938
NextBio:973962 Genevestigator:P09938 GermOnline:YJL026W
Uniprot:P09938
Length = 399
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 198/327 (60%), Positives = 241/327 (73%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
EEPLL + +R +FPI+Y +IW+ YK+AEASFWTAEE+DLS+D+ W + +E+ F+
Sbjct: 75 EEPLLNEDKERTVLFPIKYHEIWQAYKRAEASFWTAEEIDLSKDIHDWNNRMNENERFFI 134
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
+ VLAFFAASDGIV ENL F TEVQ+ EA++FYGFQI IENIHSE YSLL++TYIKD
Sbjct: 135 SRVLAFFAASDGIVNENLVENFSTEVQIPEAKSFYGFQIMIENIHSETYSLLIDTYIKDP 194
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLK 183
E LF+AI T+P + +KA WAL WI D F ERL+AFA +EG+FFSGSF +IFWLK
Sbjct: 195 KESEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAFASIEGVFFSGSFASIFWLK 254
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
KRG+MPGLTFSNELI RDEGLH DFACLL++ L+ K V+ +V EAVEIE+ + DA
Sbjct: 255 KRGMMPGLTFSNELICRDEGLHTDFACLLFAHLKNKPDPAIVEKIVTEAVEIEQRYFLDA 314
Query: 244 LPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVG 303
LP AL+GMN +LM+QY+EFVADR V NPFD+ME ISL GKTNFFEKRV
Sbjct: 315 LPVALLGMNADLMNQYVEFVADRLLVAFGNKKYYKVENPFDFMENISLAGKTNFFEKRVS 374
Query: 304 EYQKASVMS-SLNGNGGNHVFKIDEDF 329
+YQKA VMS S G F +EDF
Sbjct: 375 DYQKAGVMSKSTKQEAG--AFTFNEDF 399
>UNIPROTKB|I3LV77 [details] [associations]
symbol:I3LV77 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046914 "transition metal ion binding" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0005971 "ribonucleoside-diphosphate reductase
complex" evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate
reductase activity, thioredoxin disulfide as acceptor"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
EMBL:CU856316 Ensembl:ENSSSCT00000017108 Uniprot:I3LV77
Length = 379
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 202/329 (61%), Positives = 238/329 (72%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
PS+ +P L NP F +FPI+Y IW+MYKKAEASFWTAEEV LS+ ++HWE + E+
Sbjct: 61 PSVKGKPPLRENPRCFVIFPIKYHDIWQMYKKAEASFWTAEEVGLSKGIQHWETMKPKER 120
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++H LAFFAASDGIV ENL F E+Q+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 121 YFISH-LAFFAASDGIVDENLVEWFSQEIQITEARCFYGFQIAMENIHSEMYSLLIDTYI 179
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIF 180
KDS E LF+AIET+PCV K+A WAL+W+ E ER+I FA VEGIFFSGSF + F
Sbjct: 180 KDSKESEFLFNAIETMPCVKKEADWALHWMGDKEAPRGERVITFAAVEGIFFSGSFASTF 239
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLT ISRDEGLHCDFACL++ LL K SE+RVK ++ AV IE+EF
Sbjct: 240 WLKKRGLMPGLT-----ISRDEGLHCDFACLMFKLLLHKPSEQRVKEIIINAVRIEQEFF 294
Query: 241 CDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEK 300
+ LP L GMN LM QYIEFVADR V NPFD+ME ISL+GKTNF EK
Sbjct: 295 IEELPVKLTGMNCTLMKQYIEFVADRLRLELGFSKVFRVENPFDFMENISLEGKTNFSEK 354
Query: 301 RVGEYQKASVMSSLNGNGGNHVFKIDEDF 329
RVGEYQ+ VMSS N F +D DF
Sbjct: 355 RVGEYQRMGVMSSRTENS----FTLDADF 379
>CGD|CAL0001735 [details] [associations]
symbol:RNR22 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
CGD:CAL0001735 GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20
EMBL:AACQ01000133 EMBL:AACQ01000132 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409
RefSeq:XP_713125.1 RefSeq:XP_713171.1 ProteinModelPortal:Q59U83
SMR:Q59U83 STRING:Q59U83 GeneID:3645171 GeneID:3645217
KEGG:cal:CaO19.1868 KEGG:cal:CaO19.9424 Uniprot:Q59U83
Length = 394
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 192/326 (58%), Positives = 242/326 (74%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL P+ R ++PI+YP++W+ YKK+ ASFWTAEE+DLS+DL W + +E+ F++
Sbjct: 71 EPLLTPDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNKMNENERFFIS 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F EVQ+ EA++ Y FQI +ENIHSE YSLL+ETY KD +
Sbjct: 131 RVLAFFAASDGIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLIETYFKDPE 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AI+ +P + KKA WA+ WI + +AERL+AFA VEGIFFSGSF AIFWLKK
Sbjct: 191 EADFLFNAIDNIPFIRKKADWAIRWIQSEDALYAERLVAFAAVEGIFFSGSFAAIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEG+H D+ACLL+S L+ K S E ++ ++ EAV+IE+E+ DAL
Sbjct: 251 RGLMPGLTFSNELICRDEGIHTDYACLLFSYLKNKPSSEIIEKIITEAVDIEKEYFSDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM QY+EFVADR V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 311 PVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVTNPFDFMENISLAGKTNFFEKRVSD 370
Query: 305 YQKASVMSSL-NGNGGNHVFKIDEDF 329
YQKA VM + N N +F D+DF
Sbjct: 371 YQKAGVMEKVENKNEKTGLF--DQDF 394
>UNIPROTKB|Q59U83 [details] [associations]
symbol:RNR22 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
CGD:CAL0001735 GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20
EMBL:AACQ01000133 EMBL:AACQ01000132 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409
RefSeq:XP_713125.1 RefSeq:XP_713171.1 ProteinModelPortal:Q59U83
SMR:Q59U83 STRING:Q59U83 GeneID:3645171 GeneID:3645217
KEGG:cal:CaO19.1868 KEGG:cal:CaO19.9424 Uniprot:Q59U83
Length = 394
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 192/326 (58%), Positives = 242/326 (74%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFVT 65
EPLL P+ R ++PI+YP++W+ YKK+ ASFWTAEE+DLS+DL W + +E+ F++
Sbjct: 71 EPLLTPDKTRHTIYPIKYPELWQFYKKSLASFWTAEELDLSKDLDDWNNKMNENERFFIS 130
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
VLAFFAASDGIV ENL F EVQ+ EA++ Y FQI +ENIHSE YSLL+ETY KD +
Sbjct: 131 RVLAFFAASDGIVNENLVENFCAEVQIPEAKSVYKFQIMMENIHSETYSLLIETYFKDPE 190
Query: 126 EKNRLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLKK 184
E + LF+AI+ +P + KKA WA+ WI + +AERL+AFA VEGIFFSGSF AIFWLKK
Sbjct: 191 EADFLFNAIDNIPFIRKKADWAIRWIQSEDALYAERLVAFAAVEGIFFSGSFAAIFWLKK 250
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELI RDEG+H D+ACLL+S L+ K S E ++ ++ EAV+IE+E+ DAL
Sbjct: 251 RGLMPGLTFSNELICRDEGIHTDYACLLFSYLKNKPSSEIIEKIITEAVDIEKEYFSDAL 310
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P +L+GMN +LM QY+EFVADR V NPFD+ME ISL GKTNFFEKRV +
Sbjct: 311 PVSLLGMNCDLMCQYVEFVADRLLVAFGNKKYYNVTNPFDFMENISLAGKTNFFEKRVSD 370
Query: 305 YQKASVMSSL-NGNGGNHVFKIDEDF 329
YQKA VM + N N +F D+DF
Sbjct: 371 YQKAGVMEKVENKNEKTGLF--DQDF 394
>UNIPROTKB|C9JXC1 [details] [associations]
symbol:RRM2 "Ribonucleoside-diphosphate reductase subunit
M2" species:9606 "Homo sapiens" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0046914 "transition metal ion binding"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 EMBL:AC104794 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 HOGENOM:HOG000255975 PANTHER:PTHR23409
EMBL:AC118058 HGNC:HGNC:10452 IPI:IPI01014515
ProteinModelPortal:C9JXC1 SMR:C9JXC1 STRING:C9JXC1
Ensembl:ENST00000474701 ArrayExpress:C9JXC1 Bgee:C9JXC1
Uniprot:C9JXC1
Length = 289
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 186/266 (69%), Positives = 220/266 (82%)
Query: 2 PSIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEK 61
P + +EPLL NP RF +FPI+Y IW+MYKKAEASFWTAEEVDLS+D++HWE+L +E+
Sbjct: 15 PGVEDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEER 74
Query: 62 HFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYI 121
+F++HVLAFFAASDGIV ENL RF EVQ+ EAR FYGFQIA+ENIHSEMYSLL++TYI
Sbjct: 75 YFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYI 134
Query: 122 KDSDEKNRLFHAIETVPCVAKKATWALNWIDGSE-TFAERLIAFACVEGIFFSGSFCAIF 180
KD E+ LF+AIET+PCV KKA WAL WI E T+ ER++AFA VEGIFFSGSF +IF
Sbjct: 135 KDPKEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIF 194
Query: 181 WLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFV 240
WLKKRGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV+ ++ AV IE+EF+
Sbjct: 195 WLKKRGLMPGLTFSNELISRDEGLHCDFACLMFKHLVHKPSEERVREIIINAVRIEQEFL 254
Query: 241 CDALPCALVGMNGELMSQYIEFVADR 266
+ALP L+GMN LM QYIEFVADR
Sbjct: 255 TEALPVKLIGMNCTLMKQYIEFVADR 280
>UNIPROTKB|D4ADQ1 [details] [associations]
symbol:Rrm2b "Protein Rrm2b" species:10116 "Rattus
norvegicus" [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0046914 "transition metal ion
binding" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
IPI:IPI00360839 PRIDE:D4ADQ1 Ensembl:ENSRNOT00000033704
Uniprot:D4ADQ1
Length = 349
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 199/325 (61%), Positives = 234/325 (72%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EEPLL + RF +FPIQYP IW+MYK+A+ASFWTAEEV S+D W A F+
Sbjct: 31 EEPLLRKSSRRFVIFPIQYPDIWKMYKQAQASFWTAEEVWSSRDC--WRTSRAHSYLFIC 88
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
HVL F SD +N+ RF EVQV EAR FYGFQI IEN+HSEMYSLL++TYI+D
Sbjct: 89 HVLKRFILSDACSPQNIVERFSQEVQVPEARCFYGFQILIENVHSEMYSLLIDTYIRDPK 148
Query: 126 EKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKK 184
++ LF+AIET+P V KKA WAL WI D TF ER++AFA VEGIFFSGSF AIFWLKK
Sbjct: 149 KREFLFNAIETMPYVKKKADWALRWIADRKSTFGERVVAFAAVEGIFFSGSFAAIFWLKK 208
Query: 185 RGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDAL 244
RGLMPGLTFSNELISRDEGLHCDFACL++ L K SEERV ++ +AV+IE+EF+ +AL
Sbjct: 209 RGLMPGLTFSNELISRDEGLHCDFACLMFQYLVNKPSEERVMEIIVDAVKIEQEFLTEAL 268
Query: 245 PCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVGE 304
P L+GMN LM QYIEFVADR NPFD+ME ISL+GKTNFFEKRV E
Sbjct: 269 PVGLIGMNCVLMKQYIEFVADRLLGELGFSKIFQAENPFDFMENISLEGKTNFFEKRVSE 328
Query: 305 YQKASVMSSLNGNGGNHVFKIDEDF 329
YQ+ +VM+ N VF +D DF
Sbjct: 329 YQRFAVMAETTDN----VFTLDADF 349
>WB|WBGene00019055 [details] [associations]
symbol:F58F9.1 species:6239 "Caenorhabditis elegans"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
GO:GO:0046914 GO:GO:0006974 GO:GO:0019915 SUPFAM:SSF47240
Gene3D:1.10.620.20 EMBL:FO081504 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
GeneTree:ENSGT00390000013305 EMBL:FO080901 RefSeq:NP_500944.2
UniGene:Cel.36857 ProteinModelPortal:Q20993 SMR:Q20993
EnsemblMetazoa:F58F9.1 GeneID:186533 KEGG:cel:CELE_F58F9.1
UCSC:F58F9.1 CTD:186533 WormBase:F58F9.1 InParanoid:Q20993
NextBio:932178 Uniprot:Q20993
Length = 581
Score = 678 (243.7 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
Identities = 131/195 (67%), Positives = 151/195 (77%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
EPLLAPN +RF + PI + IWE YKKA A FWT+EEVDL +D+ HWE LT+DE+ F++
Sbjct: 307 EPLLAPNNNRFVVHPIVHRDIWEFYKKAVACFWTSEEVDLGKDMSHWEILTSDERQFISS 366
Query: 67 VLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDE 126
+LAFFAASDGIV ENL RF TEVQV EAR FYGFQIA+ENIHSEMY+ LLE YI+D E
Sbjct: 367 ILAFFAASDGIVTENLCSRFSTEVQVTEARFFYGFQIAVENIHSEMYAKLLEAYIRDDAE 426
Query: 127 KNRLFHAIETVPCVAKKATWALNWI-DGSETFAERLIAFACVEGIFFSGSFCAIFWLKKR 185
+N LF+AI T + KA W L WI D + F+ERL A A VEGIFFS SF AIFWLKKR
Sbjct: 427 RNILFNAITTFKFIKAKADWCLRWISDHNAPFSERLAAVAAVEGIFFSSSFAAIFWLKKR 486
Query: 186 GLMPGLTFSNELISR 200
GL+PGLT SNELISR
Sbjct: 487 GLLPGLTHSNELISR 501
Score = 178 (67.7 bits), Expect = 1.5e-83, Sum P(2) = 1.5e-83
Identities = 35/84 (41%), Positives = 53/84 (63%)
Query: 215 LLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRXXXXXXXX 274
L+ K +E R+ ++ E+V +E++FV ++LP L+GMN +M +Y+EFVAD
Sbjct: 498 LISRKPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYS 557
Query: 275 XXXXVANPFDWMELISLQGKTNFF 298
N FD+ME IS++GKTNFF
Sbjct: 558 KRYNTKNLFDFMENISIEGKTNFF 581
>SGD|S000003412 [details] [associations]
symbol:RNR4 "Ribonucleotide-diphosphate reductase (RNR) small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0046914
"transition metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IGI;IMP;IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA;IDA;IPI] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0051188 "cofactor biosynthetic process" evidence=IMP;IPI]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
SGD:S000003412 GO:GO:0005634 EMBL:BK006941 GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 RefSeq:NP_011696.3 GeneID:853091
KEGG:sce:YGR180C KO:K10808 Gene3D:1.10.620.20 GO:GO:0009263
RefSeq:NP_011703.3 GeneID:853099 KEGG:sce:YGR187C GO:GO:0051188
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PDB:1ZZD PDBsum:1ZZD
eggNOG:COG0208 HOGENOM:HOG000255975 PANTHER:PTHR23409 PDB:1JK0
PDBsum:1JK0 EMBL:U30385 EMBL:Z72965 EMBL:AY723819 PIR:S59744
PDB:1SMS PDBsum:1SMS DisProt:DP00488 ProteinModelPortal:P49723
SMR:P49723 DIP:DIP-5381N IntAct:P49723 MINT:MINT-537732
STRING:P49723 PaxDb:P49723 PeptideAtlas:P49723 EnsemblFungi:YGR180C
CYGD:YGR180c OrthoDB:EOG4DZ55B EvolutionaryTrace:P49723
NextBio:973076 Genevestigator:P49723 GermOnline:YGR180C
Uniprot:P49723
Length = 345
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 140/326 (42%), Positives = 209/326 (64%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
+E LL N RF MFPI+Y +IW YKK EASFWTAEE++L++D ++ LT D+K ++
Sbjct: 24 DEILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIG 83
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
++LA +SD +V + L F ++Q E ++FYGFQI +ENI+SE+YS++++ + KD
Sbjct: 84 NLLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDP- 142
Query: 126 EKN-RLFHAIETVPCVAKKATWALNWIDGSET-FAERLIAFACVEGIFFSGSFCAIFWLK 183
KN LF I +P V KA + WI ++ +AERL+AFA EGIF +G++ ++FWL
Sbjct: 143 -KNIPLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLT 201
Query: 184 KRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCDA 243
+ +MPGL +N I RD G + DF+CLL++ LRTK + + ++ ++ EAVEIE+E+ ++
Sbjct: 202 DKKIMPGLAMANRNICRDRGAYTDFSCLLFAHLRTKPNPKIIEKIITEAVEIEKEYYSNS 261
Query: 244 LPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISLQGKTNFFEKRVG 303
LP GM+ + + YIEFVAD NPF++ME ++ GKT FFEK+V
Sbjct: 262 LPVEKFGMDLKSIHTYIEFVADGLLQGFGNEKYYNAVNPFEFMEDVATAGKTTFFEKKVS 321
Query: 304 EYQKASVMSSLNGNGGNHVFKIDEDF 329
+YQKAS MS + + D+DF
Sbjct: 322 DYQKASDMSK-SATPSKEI-NFDDDF 345
>WB|WBGene00017610 [details] [associations]
symbol:F19G12.2 species:6239 "Caenorhabditis elegans"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=IEA] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
GO:GO:0046914 GO:GO:0006974 GO:GO:0019915 SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 GeneTree:ENSGT00390000013305
KO:K00526 HOGENOM:HOG000113979 EMBL:FO081182 PIR:T29884
RefSeq:NP_508269.1 UniGene:Cel.26506 HSSP:P11157
ProteinModelPortal:Q19599 SMR:Q19599 STRING:Q19599
EnsemblMetazoa:F19G12.2 GeneID:184692 KEGG:cel:CELE_F19G12.2
UCSC:F19G12.2 CTD:184692 WormBase:F19G12.2 InParanoid:Q19599
OMA:KFLIEAY NextBio:925670 Uniprot:Q19599
Length = 668
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 115/213 (53%), Positives = 146/213 (68%)
Query: 103 IAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWALNWI-DGSETFAERL 161
IA+ENIHSEMY+ LLE YI+D E+N LF+AI T + KA W L WI D + F+ERL
Sbjct: 445 IAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFIKAKADWCLRWISDHNAPFSERL 504
Query: 162 IAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH--CDFACLLYSLLRT- 218
AFA VEGIFFS SF AIFWLKKRGL+PGLT SNELIS LH C F+ ++L R
Sbjct: 505 AAFAAVEGIFFSSSFAAIFWLKKRGLLPGLTHSNELISMFL-LHPNCFFST--FNLQRRR 561
Query: 219 KLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXX 278
K +E R+ ++ E+V +E++FV ++LP L+GMN +M +Y+EFVAD
Sbjct: 562 KPAESRITEIINESVLVEQDFVRESLPTNLIGMNQHMMCKYVEFVADLLLEELGYSKRYN 621
Query: 279 VANPFDWMELISLQGKTNFFEKRVGEYQKASVM 311
NPFD+ME IS++GKTNFFEKRV EYQ+ +M
Sbjct: 622 TKNPFDFMENISIEGKTNFFEKRVSEYQRPEMM 654
>DICTYBASE|DDB_G0291764 [details] [associations]
symbol:DDB_G0291764 "ribonucleotide
reductase-related" species:44689 "Dictyostelium discoideum"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046914
"transition metal ion binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0009186
"deoxyribonucleoside diphosphate metabolic process" evidence=IEA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 dictyBase:DDB_G0291764
GO:GO:0046914 EMBL:AAFI02000182 SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
PANTHER:PTHR23409 RefSeq:XP_629985.1 ProteinModelPortal:Q54E77
SMR:Q54E77 EnsemblProtists:DDB0238223 GeneID:8628315
KEGG:ddi:DDB_G0291764 Uniprot:Q54E77
Length = 257
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 101/174 (58%), Positives = 128/174 (73%)
Query: 27 IWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAFFAASDGIVLENLAGR 85
IW+MYKK A+ W EE++ S D WE LT DE+ F ++VLAFF AS GI+ +NL R
Sbjct: 87 IWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-NR 145
Query: 86 FMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKAT 145
FM++VQ+ EA+ FY +QI I+ +HSE YSLL+ET IKD + K++LF+AIET+PCV KKA
Sbjct: 146 FMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKAE 205
Query: 146 WALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELIS 199
WAL WI+ E+F +RL+A E IFFSGSF I LKKR LM GLTFSNELI+
Sbjct: 206 WALKWIN--ESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGLTFSNELIN 257
>GENEDB_PFALCIPARUM|PF10_0154 [details] [associations]
symbol:PF10_0154 "ribonucleotide reductase
small subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0006260 "DNA replication" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 GO:GO:0006260
GO:GO:0046914 EMBL:AE014185 SUPFAM:SSF47240 KO:K10808
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
PANTHER:PTHR23409 RefSeq:XP_001347439.2 ProteinModelPortal:Q8IJN8
EnsemblProtists:PF10_0154:mRNA GeneID:810312 KEGG:pfa:PF10_0154
EuPathDB:PlasmoDB:PF3D7_1015800 HOGENOM:HOG000283153
ProtClustDB:CLSZ2432312 Uniprot:Q8IJN8
Length = 335
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 88/313 (28%), Positives = 156/313 (49%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
+ +L N R+ MFPI+Y W YK+ E+ FWTAE+ + +D ++ E + + +
Sbjct: 19 DEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDKQYLENIDKNMLVKLFE 78
Query: 67 VLAFFAASDGIVLENLA---GRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++ F++ D V E A + + +Q+ E RAFYGFQ+ +ENIH E+Y+ + ETYI D
Sbjct: 79 LICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFETYIPD 138
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSF-CAIFWL 182
S +K + + + + V KK W + + + +L+ + + F+G+ I +
Sbjct: 139 SKQKRVIINKVIELDSVLKKQKWLTEIFESNIPYYNKLVLLY-ISKVLFNGTLNILIGYC 197
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
K+ ++P L +E I RDE LH DF+ + + L KL E V K AV++E +F +
Sbjct: 198 KENSILPCLCNVHEKIHRDEYLHGDFSVMCCNHLVNKLKYEHVLDYFKMAVDLEYQFSLE 257
Query: 243 ALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWME----LISLQGKTNFF 298
L ++ + E + ++E++ D PF W E +++ GK
Sbjct: 258 MLELNVLKIKKEQVRAFLEYLTDTMLTNLKYPKHYNSKYPFSWPEFTKIIVNENGKEETV 317
Query: 299 EKRVGEYQKASVM 311
+K Y + ++
Sbjct: 318 KKGENVYGEKQIL 330
>UNIPROTKB|Q8IJN8 [details] [associations]
symbol:PF10_0154 "Ribonucleotide reductase small subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006260 "DNA replication"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 GO:GO:0006260 GO:GO:0046914
EMBL:AE014185 SUPFAM:SSF47240 KO:K10808 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
RefSeq:XP_001347439.2 ProteinModelPortal:Q8IJN8
EnsemblProtists:PF10_0154:mRNA GeneID:810312 KEGG:pfa:PF10_0154
EuPathDB:PlasmoDB:PF3D7_1015800 HOGENOM:HOG000283153
ProtClustDB:CLSZ2432312 Uniprot:Q8IJN8
Length = 335
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 88/313 (28%), Positives = 156/313 (49%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTH 66
+ +L N R+ MFPI+Y W YK+ E+ FWTAE+ + +D ++ E + + +
Sbjct: 19 DEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDKQYLENIDKNMLVKLFE 78
Query: 67 VLAFFAASDGIVLENLA---GRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
++ F++ D V E A + + +Q+ E RAFYGFQ+ +ENIH E+Y+ + ETYI D
Sbjct: 79 LICFYSLKDLHVYEEQALITSKMLDIIQIPEGRAFYGFQMCMENIHDEVYACIFETYIPD 138
Query: 124 SDEKNRLFHAIETVPCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSF-CAIFWL 182
S +K + + + + V KK W + + + +L+ + + F+G+ I +
Sbjct: 139 SKQKRVIINKVIELDSVLKKQKWLTEIFESNIPYYNKLVLLY-ISKVLFNGTLNILIGYC 197
Query: 183 KKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIEREFVCD 242
K+ ++P L +E I RDE LH DF+ + + L KL E V K AV++E +F +
Sbjct: 198 KENSILPCLCNVHEKIHRDEYLHGDFSVMCCNHLVNKLKYEHVLDYFKMAVDLEYQFSLE 257
Query: 243 ALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWME----LISLQGKTNFF 298
L ++ + E + ++E++ D PF W E +++ GK
Sbjct: 258 MLELNVLKIKKEQVRAFLEYLTDTMLTNLKYPKHYNSKYPFSWPEFTKIIVNENGKEETV 317
Query: 299 EKRVGEYQKASVM 311
+K Y + ++
Sbjct: 318 KKGENVYGEKQIL 330
>UNIPROTKB|Q4JQV7 [details] [associations]
symbol:ORF18 "Ribonucleoside-diphosphate reductase small
chain" species:341980 "Human herpesvirus 3 strain Oka vaccine"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368
UniPathway:UPA00326 GO:GO:0016021 GO:GO:0006260 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0033644 EMBL:AB097932
EMBL:AB097933 EMBL:DQ008354 EMBL:DQ008355 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
ProtClustDB:CLSP2509600 RefSeq:NP_040141.1
ProteinModelPortal:Q4JQV7 IntAct:Q4JQV7 GeneID:1487715
Uniprot:Q4JQV7
Length = 306
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 84/296 (28%), Positives = 142/296 (47%)
Query: 25 PQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAG 84
P I + + ++ W + + D ++ + LT DE F + F +A+D +V NL
Sbjct: 16 PDINNLRALSISNRWLESDFIIEDDYQYLDCLTEDELIFYRFIFTFLSAADDLVNVNLGS 75
Query: 85 RFMTEV-QVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETV--PCVA 141
+T++ + +Y Q IE +H+ +YS + + + DE R+ + T+ P +
Sbjct: 76 --LTQLFSQKDIHHYYIEQECIEVVHARVYSQI-QLMLFRGDESLRVQYVNVTINNPSIQ 132
Query: 142 KKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRD 201
+K W + + + AE+ I +EGIFF SF AI +L+ GL N+LISRD
Sbjct: 133 QKVQWLEEKVRDNPSVAEKYILMILIEGIFFVSSFAAIAYLRNNGLFVVTCQFNDLISRD 192
Query: 202 EGLHCDFACLLYS-LLRTKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYI 260
E +H +C +Y+ + K + R+ L EAVEIE F+ P + +N + ++QY+
Sbjct: 193 EAIHTSASCCIYNNYVPEKPAITRIHQLFSEAVEIECAFLKSHAPKTRL-VNVDAITQYV 251
Query: 261 EFVADRXXXXXXXXXXXXVANP-FDWMELISLQGK-TNFFEKRVGEYQKASVMSSL 314
+F ADR P D+ + K TNFFE+ Y +V++ L
Sbjct: 252 KFSADRLLSAINVPKLFNTPPPDSDFPLAFMIADKNTNFFERHSTSYA-GTVINDL 306
>UNIPROTKB|P0C701 [details] [associations]
symbol:BaRF1 "Ribonucleoside-diphosphate reductase small
chain" species:10376 "Human herpesvirus 4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0006260 GO:GO:0046914 EMBL:AY961628 SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
PANTHER:PTHR23409 RefSeq:YP_401656.1 ProteinModelPortal:P0C701
IntAct:P0C701 GeneID:3783683 ProtClustDB:CLSP2509600 Uniprot:P0C701
Length = 302
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 78/272 (28%), Positives = 129/272 (47%)
Query: 39 WTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAF 98
W A + L++D + L + F + F A ++ +V N+ +T + + +
Sbjct: 25 WFAAHIVLTKDCGCLKLLNERDLEFYKFLFTFLAMAEKLVNFNI-DELVTSFESHDIDHY 83
Query: 99 YGFQIAIENIHSEMYSLLLETYIK-DSDEKNRLFHAIETVPCVAKKATWALNWIDGSETF 157
Y Q A+EN+H E Y+ +L D N AI + K +W + + + T
Sbjct: 84 YTEQKAMENVHGETYANILNMLFDGDRAAMNAYAEAIMADEALQAKISWLRDKVAAAVTL 143
Query: 158 AERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR 217
E+++ F +EGIFF SF +I L+ RGLMPG+ +N ISRDE LH A LLY+ +
Sbjct: 144 PEKILVFLLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDELLHTRAASLLYNSMT 203
Query: 218 TKLSEER---VKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRXXXXXXXX 274
K R ++ L + AVE+E F+ +A + ++ + Q++E ADR
Sbjct: 204 AKADRPRATWIQELFRTAVEVETAFI-EARGEGVTLVDVRAIKQFLEATADRILGDIGQA 262
Query: 275 XXXXVANPFDW-MELISLQGKTNFFEKRVGEY 305
P D + ++ +TNFFE+ +Y
Sbjct: 263 PLYGTPPPKDCPLTYMTSIKQTNFFEQESSDY 294
>UNIPROTKB|Q886C0 [details] [associations]
symbol:nrdB "Ribonucleoside-diphosphate reductase subunit
beta" species:223283 "Pseudomonas syringae pv. tomato str. DC3000"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
InterPro:IPR026023 Pfam:PF00268 PIRSF:PIRSF000355
UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914 EMBL:AE016853
GenomeReviews:AE016853_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009265 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526 OMA:ICNRRCQ
HOGENOM:HOG000255976 ProtClustDB:PRK07209 RefSeq:NP_791486.1
ProteinModelPortal:Q886C0 SMR:Q886C0 GeneID:1183298
KEGG:pst:PSPTO_1661 PATRIC:19994570
BioCyc:PSYR223283:GJIX-1691-MONOMER Uniprot:Q886C0
Length = 415
Score = 249 (92.7 bits), Expect = 7.0e-21, P = 7.0e-21
Identities = 67/223 (30%), Positives = 102/223 (45%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW---EALTAD 59
++ E+ ++ D + P +Y W+ Y A+ W +EV+++ D+ W E LT D
Sbjct: 81 AVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKDPEGLTDD 140
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+ V L FF+ +D +V NL + E R + Q E IH+ Y +E+
Sbjct: 141 ERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES 200
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNW-------------IDGSETFAERLIAFAC 166
D E ++H I P VAKKA W L + +D + LIA+ C
Sbjct: 201 LAMDEGEIFNMYHEI---PSVAKKAAWGLKYTRSISDPKFETGTVDTDKELLRNLIAYYC 257
Query: 167 V-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
V EGIFF F I + +R M G+ + I RDE +H +F
Sbjct: 258 VLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNF 300
Score = 221 (82.9 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 53/173 (30%), Positives = 88/173 (50%)
Query: 151 IDGSETFAERLIAFACV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 209
+D + LIA+ CV EGIFF F I + +R M G+ + I RDE +H +F
Sbjct: 242 VDTDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFG 301
Query: 210 CLLYSLLR--------TKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIE 261
+ + ++ ++ EE + ++ + ++E E+ D +P ++GMN +M Y++
Sbjct: 302 IDVINQIKIENPHLWDAEMKEEATQ-MILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLK 360
Query: 262 FVADRXXXXXXXXXXX-XVANPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 312
F+A+R NPF WM E++ L+ + NFFE RV EYQ +S
Sbjct: 361 FIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALS 413
>UNIPROTKB|Q48FF0 [details] [associations]
symbol:nrdB "Ribonucleoside-diphosphate reductase subunit
beta" species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
InterPro:IPR026023 Pfam:PF00268 PIRSF:PIRSF000355
UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914 EMBL:CP000058
GenomeReviews:CP000058_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009265 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526 OMA:ICNRRCQ
RefSeq:YP_275887.1 ProteinModelPortal:Q48FF0 SMR:Q48FF0
STRING:Q48FF0 GeneID:3559839 KEGG:psp:PSPPH_3745 PATRIC:19976927
HOGENOM:HOG000255976 ProtClustDB:PRK07209 Uniprot:Q48FF0
Length = 415
Score = 245 (91.3 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 71/223 (31%), Positives = 105/223 (47%)
Query: 3 SIPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHW---EALTAD 59
++ E+ ++ D + P +Y W+ Y A+ W +EV+++ D+ W E LT D
Sbjct: 81 AVDEKMMINCRADLNQLVPFKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDD 140
Query: 60 EKHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLET 119
E+ V L FF+ +D +V NL + E R + Q E IH+ Y +E+
Sbjct: 141 ERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIES 200
Query: 120 YIKDSDEKNRLFHAIETVPCVAKKATWALNWI----D-----GS-ETFAE---RLIAFAC 166
D E ++H I P VAKKA W L + D G+ ET E LIA+ C
Sbjct: 201 LAMDEGEIFNMYHEI---PSVAKKAAWGLKYTRSISDPKFETGTVETDKELLRNLIAYYC 257
Query: 167 V-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDF 208
V EGIFF F I + +R M G+ + I RDE +H +F
Sbjct: 258 VLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNF 300
Score = 217 (81.4 bits), Expect = 5.9e-16, P = 5.9e-16
Identities = 52/173 (30%), Positives = 88/173 (50%)
Query: 151 IDGSETFAERLIAFACV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFA 209
++ + LIA+ CV EGIFF F I + +R M G+ + I RDE +H +F
Sbjct: 242 VETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLNFG 301
Query: 210 CLLYSLLR--------TKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIE 261
+ + ++ ++ EE + ++ + ++E E+ D +P ++GMN +M Y++
Sbjct: 302 IDVINQIKIENPHLWDAEMKEEATQ-MILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLK 360
Query: 262 FVADRXXXXXXXXXXX-XVANPFDWM-ELISLQGKTNFFEKRVGEYQKASVMS 312
F+A+R NPF WM E++ L+ + NFFE RV EYQ +S
Sbjct: 361 FIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFETRVIEYQTGGALS 413
>TIGR_CMR|CBU_1554 [details] [associations]
symbol:CBU_1554 "ribonucleoside-diphosphate reductase,
beta subunit" species:227377 "Coxiella burnetii RSA 493"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
InterPro:IPR026023 Pfam:PF00268 PIRSF:PIRSF000355
UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914 EMBL:AE016828
GenomeReviews:AE016828_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009263 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
PANTHER:PTHR23409 KO:K00526 OMA:ICNRRCQ HOGENOM:HOG000255976
ProtClustDB:PRK07209 RefSeq:NP_820537.1 ProteinModelPortal:Q83BF5
SMR:Q83BF5 GeneID:1209464 KEGG:cbu:CBU_1554 PATRIC:17931869
BioCyc:CBUR227377:GJ7S-1535-MONOMER Uniprot:Q83BF5
Length = 401
Score = 239 (89.2 bits), Expect = 8.0e-20, P = 8.0e-20
Identities = 71/254 (27%), Positives = 118/254 (46%)
Query: 4 IPEEPLLAPNPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWE---ALTADE 60
+ ++ ++ + D + P +Y W+ Y A+ W E++++ D+ W+ LTADE
Sbjct: 67 VDDKKIINCHADLNQLVPFKYTWAWQKYLSGCANHWMPNEINMTADIALWKDPNGLTADE 126
Query: 61 KHFVTHVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
+ V L FF+ +D +V NL + E R + Q E +H+ Y ++E+
Sbjct: 127 RTIVKRSLGFFSTADSLVANNLVLAIYRHITNPECRQYLLRQAFEEALHTHAYQYIIESL 186
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWAL---------NWIDGSETFAERL----IAFACV 167
D E +F+ +P V+KKA WAL N+ G+ RL IAF V
Sbjct: 187 GLDEAE---VFNMYRELPAVSKKAVWALPYTQSLADPNFKTGTPEDDRRLLRDLIAFYVV 243
Query: 168 -EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKLSEERVK 226
EG+FF F I + +RG M G + + I RDE +H +F + + ++ + K
Sbjct: 244 FEGLFFYVGFTQILAMGRRGKMTGTSEQFQYILRDESMHVNFGIDVINQIKIENPHLWNK 303
Query: 227 ALVKEAVEIEREFV 240
KE +E+ E V
Sbjct: 304 NFQKEVIEMILEGV 317
Score = 198 (74.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 50/161 (31%), Positives = 83/161 (51%)
Query: 161 LIAFACV-EGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR-- 217
LIAF V EG+FF F I + +RG M G + + I RDE +H +F + + ++
Sbjct: 237 LIAFYVVFEGLFFYVGFTQILAMGRRGKMTGTSEQFQYILRDESMHVNFGIDVINQIKIE 296
Query: 218 -----TKLSEERVKALVKEAVEIEREFVCDALPCALVGMNGELMSQYIEFVADRXXXXXX 272
K ++ V ++ E VE+E ++ D +P ++G+N + Y++++A+R
Sbjct: 297 NPHLWNKNFQKEVIEMILEGVELEYQYAKDTMPRGILGLNANMFKDYLQYIANRRCAQIG 356
Query: 273 XXXXXXVA-NPFDWM-ELISLQGKTNFFEKRVGEYQKASVM 311
A N F WM E++ L+ + NFFE RV EYQ +
Sbjct: 357 LPEQFPGAKNTFPWMSEMMDLKKEKNFFETRVIEYQAGGTL 397
>TIGR_CMR|APH_0560 [details] [associations]
symbol:APH_0560 "ribonucleoside-diphosphate reductase,
beta subunit" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 Pfam:PF00268
PIRSF:PIRSF000355 UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914
EMBL:CP000235 GenomeReviews:CP000235_GR SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526
ProtClustDB:PRK09614 HOGENOM:HOG000064511 RefSeq:YP_505152.1
ProteinModelPortal:Q2GKE9 STRING:Q2GKE9 GeneID:3930960
KEGG:aph:APH_0560 PATRIC:20949782 OMA:KEEQIHG
BioCyc:APHA212042:GHPM-584-MONOMER Uniprot:Q2GKE9
Length = 323
Score = 209 (78.6 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 82/307 (26%), Positives = 140/307 (45%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTAD-EKHFVTHVLAFFAASDGIVL 79
P YP ++ + + W EEV L+ D++ W+ + ++ EK+ + + FF +D I +
Sbjct: 12 PFDYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTMLSEKEKNLLVQIFRFFTQAD-IEV 70
Query: 80 ENLAGRFMTEV-QVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVP 138
N + + + + E +E IH YS LL+T I + + + F E +
Sbjct: 71 NNCYMKHYSNIFRPTEICMMLSAFSNMETIHVAAYSYLLDT-IGMPEVEYQAFLKFEVMK 129
Query: 139 CVAKKATWALNWID---GSETF-AERLIAF-ACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
KK + + + G + A+ L F A EG+ SF + ++ G M G+
Sbjct: 130 ---KKYDYMQRFEECRRGDKRHVAKTLAVFGAFTEGLQLFASFAILLNFQRFGKMKGMGQ 186
Query: 194 SNELISRDEGLHCDFACLLYSLL---RTKLSEERVKALVKEA----VEIEREFVCDALPC 246
+RDE LH D L++ ++ ++ +K + +A V +E EF+ A
Sbjct: 187 IIAWSARDESLHTDSIIRLFNTFVHENGEIWDDDLKQELYDACKVIVMLEDEFIDLAFAL 246
Query: 247 ALV-GMNGELMSQYIEFVADRXXXXXXXXXXXXVA-NPFDWMELISLQG--KTNFFEKRV 302
V G++ + +YI F+A+R VA NP W++ I L G TNFFE RV
Sbjct: 247 GDVEGLSACEVKRYIRFIANRRLKQLHLEPIYDVAENPLPWLDEI-LNGVEHTNFFENRV 305
Query: 303 GEYQKAS 309
EY +A+
Sbjct: 306 TEYARAA 312
>TIGR_CMR|ECH_0766 [details] [associations]
symbol:ECH_0766 "ribonucleoside-diphosphate reductase,
beta subunit" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 Pfam:PF00268
PIRSF:PIRSF000355 UniPathway:UPA00326 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006260 GO:GO:0046914
SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263 GO:GO:0005971
GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
KO:K00526 OMA:ICNRRCQ ProtClustDB:PRK09614 HOGENOM:HOG000064511
RefSeq:YP_507564.1 ProteinModelPortal:Q2GG69 STRING:Q2GG69
GeneID:3927647 KEGG:ech:ECH_0766 PATRIC:20576964
BioCyc:ECHA205920:GJNR-769-MONOMER Uniprot:Q2GG69
Length = 324
Score = 204 (76.9 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 79/307 (25%), Positives = 138/307 (44%)
Query: 21 PIQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTAD-EKHFVTHVLAFFAASDGIVL 79
P YP ++ + + W EEV L+ D++ W+ + ++ EK+ + + FF +D I +
Sbjct: 12 PFNYPWAYDAWLCQQRIHWLPEEVPLADDVQDWKTVLSEKEKNLLVQIFRFFTQAD-IEV 70
Query: 80 ENLAGRFMTEV-QVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVP 138
N + + + + E +E IH YS LL+T I + + + F E +
Sbjct: 71 NNCYMKHYSNIFKPTEVCMMLSAFSNMETIHIAAYSYLLDT-IGMPEIEYQAFLKFEVMK 129
Query: 139 CVAKKATWALNWIDGSET----FAERLIAF-ACVEGIFFSGSFCAIFWLKKRGLMPGLTF 193
KK + + + + A+ L F A EG+ SF + ++ G M G+
Sbjct: 130 ---KKYDYMQRFEECRKNDKRHVAKTLAVFGAFTEGLQLFASFAILLNFQRFGKMKGMGQ 186
Query: 194 SNELISRDEGLHCDFACLLYSLL---RTKLSEERVKALVKEA----VEIEREFVCDALPC 246
RDE LH + L++ ++ ++ +K + EA V +E EF+ A C
Sbjct: 187 IIAWSVRDETLHTESIIRLFNTFIQENYEIWDDSLKQELYEACRIIVSLEDEFINLAFAC 246
Query: 247 ALV-GMNGELMSQYIEFVADRXXXXXXXXXXXXV-ANPFDWMELISLQG--KTNFFEKRV 302
V G++ + + +YI ++A+R NP W++ I L G TNFFE RV
Sbjct: 247 GDVEGLSSKEVKEYIRYIANRRLLQLNLEPIYDTNKNPLLWLDEI-LNGVEHTNFFENRV 305
Query: 303 GEYQKAS 309
EY +A+
Sbjct: 306 TEYARAA 312
>TIGR_CMR|CPS_2327 [details] [associations]
symbol:CPS_2327 "ribonucleotide reductase, beta subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914 EMBL:CP000083
GenomeReviews:CP000083_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 eggNOG:COG0208
PANTHER:PTHR23409 KO:K00526 HOGENOM:HOG000278087 OMA:LEPMFLG
ProtClustDB:PRK09101 RefSeq:YP_269047.1 ProteinModelPortal:Q482H0
SMR:Q482H0 STRING:Q482H0 GeneID:3520513 KEGG:cps:CPS_2327
PATRIC:21467747 BioCyc:CPSY167879:GI48-2392-MONOMER Uniprot:Q482H0
Length = 376
Score = 130 (50.8 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 37/147 (25%), Positives = 62/147 (42%)
Query: 7 EPLLAPNPDRFCMFPIQ-YPQIWEMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EP+ N + Q Y ++ +K + FW EEVD+S+D W++LT EKH
Sbjct: 16 EPMFLGNSVNVSRYDQQRYIAFEKLIEKQLSFFWRPEEVDVSKDRADWQSLTDSEKHIFI 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSD 125
L + D + ++ + V + E + E IHS Y+ +L +
Sbjct: 76 SNLKYQTLLDSMAARSVNAVLLPLVSLPEVETWVETWAFSETIHSRSYTHILRNLFTEPG 135
Query: 126 EKNRLFHAIETVPCVAKKATWALNWID 152
E +F I P + K+A+ + D
Sbjct: 136 E---IFDDIIVNPAILKRASSIAKFFD 159
Score = 112 (44.5 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 44/178 (24%), Positives = 79/178 (44%)
Query: 159 ERLIAFAC----VEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS 214
ERL C +E I F SF F +R L+ G +LI+RDE LH + +
Sbjct: 192 ERLFLAVCSVNALEAIRFYVSFACSFAFAERELLEGNAKIIKLIARDEALHLTGTQHILN 251
Query: 215 LLRTKLSEERVKALVKE-----------AVEIEREFVCDALPC-ALVGMNGELMSQYIEF 262
R+ + +K + +E VE E+E+ +++G+N ++++QYIE+
Sbjct: 252 NWRSGKDDPEMKIISEELRDEGLQIFLDVVEQEKEWAQYLFKDGSMIGLNADILNQYIEY 311
Query: 263 VADRXXXXXXXXXXXXV-ANPFDWME--LISLQGKTNFFEKRVGEYQKASVMSSLNGN 317
++++ + +NP WM L+S + E + Y V SS++ +
Sbjct: 312 ISNQRLTAIGFGAPFDIKSNPLPWMNAYLVSDNVQVAPQETEISSYLVGQVDSSVDAD 369
>TIGR_CMR|CJE_0282 [details] [associations]
symbol:CJE_0282 "ribonucleoside-diphosphate reductase,
beta subunit" species:195099 "Campylobacter jejuni RM1221"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
InterPro:IPR026023 Pfam:PF00268 PIRSF:PIRSF000355
UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914 EMBL:CP000025
GenomeReviews:CP000025_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009263 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526 OMA:LEPMFLG
ProtClustDB:PRK09614 RefSeq:YP_178304.1 ProteinModelPortal:Q5HWN1
STRING:Q5HWN1 GeneID:3231044 KEGG:cjr:CJE0282 PATRIC:20042262
HOGENOM:HOG000056923 BioCyc:CJEJ195099:GJC0-287-MONOMER
Uniprot:Q5HWN1
Length = 340
Score = 189 (71.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 70/313 (22%), Positives = 131/313 (41%)
Query: 13 NPDRFCMFP-IQYPQIWEMYKKAEASFWTAEEVDLSQDLRHWEA-LTADEKHFVTHVLAF 70
NP F +Y +++ EA+ W +EVD ++D + LT EK V +
Sbjct: 24 NPHGILNFTKAKYTWALKLWDLMEANTWFPKEVDTTKDALDYRCNLTVGEKRMYDLVWSQ 83
Query: 71 FAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRL 130
+ D NLA + E A Q E HS+ Y++++E ++D +
Sbjct: 84 LISMDSFQTNNLADNINPYITAPEINAVLARQAYEEANHSKSYAVMVEAICDNTDLIYEM 143
Query: 131 FHAIETV----PCVAKKATWALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRG 186
ET+ ++ +D ++ ++A +EG++F F AI+ L + G
Sbjct: 144 EKHDETLREKNDFISSIYEELAGDVDDNKLLLA-MVANQILEGVYFYSGFTAIYALARAG 202
Query: 187 LMPGLTFSNELISRDEGLHCD-FACLLYSLLRTK---LSEERVKALV---KEAVEIEREF 239
M G I RDE H F ++ S+ + + +E + + K+A ++E ++
Sbjct: 203 KMLGSAQMIRFIQRDEITHLLLFQNMINSVRKERPDLFHDENINKIYDMFKKAGDLEIKW 262
Query: 240 VCDALPCALVGMNGELMSQYIEFVADRXXXXXXXXXXXXVANPFDWMELISL--QGKTNF 297
++G +++ +YI ++ D+ +P W++ S K+NF
Sbjct: 263 GKYITQNQIMGFTDDIIEEYIHYLVDQRLSAINLDKLYNAKHPIKWVDDFSKFNDQKSNF 322
Query: 298 FEKRVGEYQKASV 310
FE +V Y K S+
Sbjct: 323 FESKVTNYSKGSI 335
>TIGR_CMR|NSE_0520 [details] [associations]
symbol:NSE_0520 "ribonucleoside-diphosphate reductase,
beta subunit" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 Pfam:PF00268
PIRSF:PIRSF000355 UniPathway:UPA00326 GO:GO:0006260 GO:GO:0046914
EMBL:CP000237 GenomeReviews:CP000237_GR SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0009263 GO:GO:0005971 GO:GO:0004748
GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526
OMA:YIADWRL ProtClustDB:PRK09614 RefSeq:YP_506404.1
ProteinModelPortal:Q2GDP2 STRING:Q2GDP2 GeneID:3932158
KEGG:nse:NSE_0520 PATRIC:22681089 HOGENOM:HOG000064511
BioCyc:NSEN222891:GHFU-540-MONOMER Uniprot:Q2GDP2
Length = 322
Score = 185 (70.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 81/320 (25%), Positives = 132/320 (41%)
Query: 9 LLAPNPDRFCMFPIQYP---QIWEMYKKAEASFWTAEEVDLSQDLRHWE-ALTADEKHFV 64
LL P R P QY Q WE+ +K W EE+ ++ D++ W + EK+ +
Sbjct: 3 LLEP---RLSYKPFQYDWAYQAWEIQQKIH---WLPEEIPMADDVQDWHHKICGTEKNLL 56
Query: 65 THVLAFFAASDGIV----LENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETY 120
T + FF +D V + + AG F AF +E IH Y+ LL+T
Sbjct: 57 TQIFRFFTQADVEVHDCYMRHYAGVFKPPEVCMMLTAFAN----METIHIAAYAHLLDTV 112
Query: 121 IKDSDEKNRLFHAIETVPCVAKKATWALNW-IDGSETFAERLIAF-ACVEGIFFSGSFCA 178
E + A + +K + + +D A+ L + A EG+ SF
Sbjct: 113 GMPETE----YLAFTKYKQMKEKCEYLKAFKMDNPTEIAKTLAVYGAFTEGLQLFASFAI 168
Query: 179 IFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYS--LLRTKLSEERVKALVKEA---- 232
+ + M G+ RDE LH + L+ LL + + +++A ++E
Sbjct: 169 LLNFPRFNKMKGMGQIIAYSVRDETLHSNSITKLFRTFLLENNIDKFKLEAEIREICNAM 228
Query: 233 VEIEREFVCDALPCALV-GMNGELMSQYIEFVAD-RXXXXXXXXXXXXVANPFDWME-LI 289
V E F+ A V G+ + +YI ++A+ R NP W+E ++
Sbjct: 229 VHHEDAFIDLAFEMGDVEGLKASEVKEYIRYIANLRLKQLGFSEIYEQKVNPLLWLEAVL 288
Query: 290 SLQGKTNFFEKRVGEYQKAS 309
+ TNFFE + EY KA+
Sbjct: 289 NTVEHTNFFENKATEYSKAA 308
>UNIPROTKB|P69924 [details] [associations]
symbol:nrdB species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=IDA] [GO:0004748 "ribonucleoside-diphosphate reductase
activity, thioredoxin disulfide as acceptor" evidence=IEA;IDA]
[GO:0005971 "ribonucleoside-diphosphate reductase complex"
evidence=IEA;IDA] [GO:0009263 "deoxyribonucleotide biosynthetic
process" evidence=IDA] [GO:0009186 "deoxyribonucleoside diphosphate
metabolic process" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IDA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0005829 GO:GO:0005506 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0006260
GO:GO:0015949 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
EMBL:K02672 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PDB:1R1R
PDB:2R1R PDB:2X0X PDB:2XAK PDB:2XAP PDB:2XAV PDB:2XAW PDB:2XAX
PDB:2XAY PDB:2XAZ PDB:2XO4 PDB:2XO5 PDB:3R1R PDB:3UUS PDB:4ERM
PDB:4ERP PDB:4R1R PDB:5R1R PDB:6R1R PDB:7R1R PDBsum:1R1R
PDBsum:2R1R PDBsum:2X0X PDBsum:2XAK PDBsum:2XAP PDBsum:2XAV
PDBsum:2XAW PDBsum:2XAX PDBsum:2XAY PDBsum:2XAZ PDBsum:2XO4
PDBsum:2XO5 PDBsum:3R1R PDBsum:3UUS PDBsum:4ERM PDBsum:4ERP
PDBsum:4R1R PDBsum:5R1R PDBsum:6R1R PDBsum:7R1R eggNOG:COG0208
PANTHER:PTHR23409 KO:K00526 PIR:A00527 RefSeq:NP_416738.1
RefSeq:YP_490474.1 PDB:1AV8 PDB:1BIQ PDB:1JPR PDB:1JQC PDB:1MRR
PDB:1MXR PDB:1PFR PDB:1PIM PDB:1PIU PDB:1PIY PDB:1PIZ PDB:1PJ0
PDB:1PJ1 PDB:1PM2 PDB:1R65 PDB:1RIB PDB:1RNR PDB:1RSR PDB:1RSV
PDB:1XIK PDB:1YFD PDB:2ALX PDB:2AV8 PDB:2XOF PDBsum:1AV8
PDBsum:1BIQ PDBsum:1JPR PDBsum:1JQC PDBsum:1MRR PDBsum:1MXR
PDBsum:1PFR PDBsum:1PIM PDBsum:1PIU PDBsum:1PIY PDBsum:1PIZ
PDBsum:1PJ0 PDBsum:1PJ1 PDBsum:1PM2 PDBsum:1R65 PDBsum:1RIB
PDBsum:1RNR PDBsum:1RSR PDBsum:1RSV PDBsum:1XIK PDBsum:1YFD
PDBsum:2ALX PDBsum:2AV8 PDBsum:2XOF ProteinModelPortal:P69924
SMR:P69924 DIP:DIP-36213N IntAct:P69924 MINT:MINT-1269534
PRIDE:P69924 EnsemblBacteria:EBESCT00000003830
EnsemblBacteria:EBESCT00000015940 GeneID:12931498 GeneID:946732
KEGG:ecj:Y75_p2197 KEGG:eco:b2235 PATRIC:32119829 EchoBASE:EB0655
EcoGene:EG10661 HOGENOM:HOG000278087 OMA:LEPMFLG
ProtClustDB:PRK09101 BioCyc:EcoCyc:NRDB-MONOMER
BioCyc:ECOL316407:JW2229-MONOMER BioCyc:MetaCyc:NRDB-MONOMER
SABIO-RK:P69924 EvolutionaryTrace:P69924 Genevestigator:P69924
Uniprot:P69924
Length = 376
Score = 109 (43.4 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 36/148 (24%), Positives = 62/148 (41%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWE-MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFV 64
+EP+ P + Q I+E + +K + FW EEVD+S+D ++AL EKH
Sbjct: 15 KEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIF 74
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDS 124
L + D I + + + + E + E IHS Y+ ++ + D
Sbjct: 75 ISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDP 134
Query: 125 DEKNRLFHAIETVPCVAKKATWALNWID 152
+F I T + K+A ++ D
Sbjct: 135 SV---VFDDIVTNEQIQKRAEGISSYYD 159
Score = 102 (41.0 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 44/171 (25%), Positives = 78/171 (45%)
Query: 161 LIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRT-- 218
L++ +E I F SF F +R LM G LI+RDE LH + +LLR+
Sbjct: 198 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGA 257
Query: 219 ---KLSE--ERVKA----LVKEAVEIEREFVCDAL--PCALVGMNGELMSQYIEFVAD-R 266
+++E E K L +A + E+++ D L +++G+N +++ QY+E++ + R
Sbjct: 258 DDPEMAEIAEECKQECYDLFVQAAQQEKDWA-DYLFRDGSMIGLNKDILCQYVEYITNIR 316
Query: 267 XXXXXXXXXXXXVANPFDWME--LISLQGKTNFFEKRVGEYQKASVMSSLN 315
+NP W+ L+S + E V Y + S ++
Sbjct: 317 MQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVD 367
>TIGR_CMR|BA_1372 [details] [associations]
symbol:BA_1372 "ribonucleoside-diphosphate reductase, beta
subunit" species:198094 "Bacillus anthracis str. Ames" [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=ISS]
[GO:0009265 "2'-deoxyribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 InterPro:IPR026494
Pfam:PF00268 PIRSF:PIRSF000355 PROSITE:PS00368 UniPathway:UPA00326
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006260
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009263
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
KO:K00526 OMA:IGYKYQR TIGRFAMs:TIGR04171 ProtClustDB:PRK09614
EMBL:AJ704809 RefSeq:NP_843830.1 RefSeq:YP_017994.1
RefSeq:YP_027539.1 HSSP:O69274 ProteinModelPortal:Q81TB4
IntAct:Q81TB4 DNASU:1088648 EnsemblBacteria:EBBACT00000008443
EnsemblBacteria:EBBACT00000017714 EnsemblBacteria:EBBACT00000022580
GeneID:1088648 GeneID:2816900 GeneID:2849972 KEGG:ban:BA_1372
KEGG:bar:GBAA_1372 KEGG:bat:BAS1270
BioCyc:BANT260799:GJAJ-1344-MONOMER
BioCyc:BANT261594:GJ7F-1400-MONOMER Uniprot:Q81TB4
Length = 322
Score = 159 (61.0 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 58/219 (26%), Positives = 103/219 (47%)
Query: 31 YKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMTEV 90
+K+ A FWT EE+ +S D W L+ +E+ VL D + +
Sbjct: 18 WKQNIAQFWTEEEIAVSSDKNTWVQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHL 77
Query: 91 QVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKA----TW 146
+ +A++ F A+E +H++ YS + T + +E + +F ++T P + KKA ++
Sbjct: 78 ENLQAKSVLAFMGAMEEVHAKSYSHIFTT-LATEEEIDEIFDWVDTHPLLEKKAGIITSY 136
Query: 147 ALNWIDGSETFAE---RLIAFACVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELIS--- 199
+ T E ++A +E +F+SG F ++ L +G LT S E+I+
Sbjct: 137 YRRLLKPEVTKKELYMAMVASVFLESYLFYSGFFYPLY-LAGQGK---LTASGEIINLII 192
Query: 200 RDEGLHCDFACLLYSLLRTKLSEERVKALVKEAVEIERE 238
RDE +H F +L + +LS E + + KE E+ E
Sbjct: 193 RDESIHGVFVGILAQQIFAELSAEDQQEVQKETQELLME 231
>UNIPROTKB|Q9KSK1 [details] [associations]
symbol:VC1255 "Ribonucleoside-diphosphate reductase, beta
subunit" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004748 "ribonucleoside-diphosphate reductase activity,
thioredoxin disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GenomeReviews:AE003852_GR
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009265
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
KO:K00526 OMA:LEPMFLG ProtClustDB:PRK09101 HSSP:P00453
EMBL:AE004204 PIR:D82223 RefSeq:NP_230900.2
ProteinModelPortal:Q9KSK1 SMR:Q9KSK1 DNASU:2614692 GeneID:2614692
KEGG:vch:VC1255 PATRIC:20081590 Uniprot:Q9KSK1
Length = 389
Score = 108 (43.1 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 161 LIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKL 220
L++ +E I F SF F +R LM G +LI+RDE LH + +LLR +
Sbjct: 210 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHMLNLLRNGM 269
Query: 221 SE-------ERVKA----LVKEAVEIEREFVCDAL--PCALVGMNGELMSQYIEFVADRX 267
+ E K L KEA E E+E+ + L +++G+N +++ QY+E++ +
Sbjct: 270 DDFTFLQVAEECKQESFDLFKEAAEQEKEWA-EYLFKDGSMIGLNKDILCQYVEYITNIR 328
Query: 268 XXXXXXXXXXXVA--NPFDWM 286
A NP W+
Sbjct: 329 MQAVGLEPAYPAATNNPIPWI 349
Score = 96 (38.9 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 30/119 (25%), Positives = 49/119 (41%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWE-MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFV 64
+EP+ P + Q +I+E + +K + FW EEVD+S D + L EKH
Sbjct: 27 KEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDYGKLPDHEKHIF 86
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
L + D I + + V + E + E IHS Y+ ++ + D
Sbjct: 87 ISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVND 145
>TIGR_CMR|VC_1255 [details] [associations]
symbol:VC_1255 "ribonucleoside-diphosphate reductase, beta
subunit" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GenomeReviews:AE003852_GR
GO:GO:0046914 SUPFAM:SSF47240 Gene3D:1.10.620.20 GO:GO:0009265
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 PANTHER:PTHR23409
KO:K00526 OMA:LEPMFLG ProtClustDB:PRK09101 HSSP:P00453
EMBL:AE004204 PIR:D82223 RefSeq:NP_230900.2
ProteinModelPortal:Q9KSK1 SMR:Q9KSK1 DNASU:2614692 GeneID:2614692
KEGG:vch:VC1255 PATRIC:20081590 Uniprot:Q9KSK1
Length = 389
Score = 108 (43.1 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 161 LIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRTKL 220
L++ +E I F SF F +R LM G +LI+RDE LH + +LLR +
Sbjct: 210 LMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIKLIARDEALHLTGTQHMLNLLRNGM 269
Query: 221 SE-------ERVKA----LVKEAVEIEREFVCDAL--PCALVGMNGELMSQYIEFVADRX 267
+ E K L KEA E E+E+ + L +++G+N +++ QY+E++ +
Sbjct: 270 DDFTFLQVAEECKQESFDLFKEAAEQEKEWA-EYLFKDGSMIGLNKDILCQYVEYITNIR 328
Query: 268 XXXXXXXXXXXVA--NPFDWM 286
A NP W+
Sbjct: 329 MQAVGLEPAYPAATNNPIPWI 349
Score = 96 (38.9 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 30/119 (25%), Positives = 49/119 (41%)
Query: 6 EEPLLAPNPDRFCMFPIQYPQIWE-MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFV 64
+EP+ P + Q +I+E + +K + FW EEVD+S D + L EKH
Sbjct: 27 KEPMFLGQPVNVARYDQQKYEIFEKLIEKQLSFFWRPEEVDVSSDRIDYGKLPDHEKHIF 86
Query: 65 THVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
L + D I + + V + E + E IHS Y+ ++ + D
Sbjct: 87 ISNLKYQTLLDSIQGRSPNVALLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVND 145
>TIGR_CMR|SO_2416 [details] [associations]
symbol:SO_2416 "ribonucleoside-diphosphate reductase, beta
subunit" species:211586 "Shewanella oneidensis MR-1" [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
InterPro:IPR000358 InterPro:IPR009078 InterPro:IPR012348
Pfam:PF00268 PROSITE:PS00368 GO:GO:0046914 EMBL:AE014299
GenomeReviews:AE014299_GR SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0005971 GO:GO:0004748 GO:GO:0009186 OMA:ELEIEWA
PANTHER:PTHR23409 KO:K00526 HOGENOM:HOG000278087
ProtClustDB:PRK09101 RefSeq:NP_718006.1 HSSP:P00453
ProteinModelPortal:Q8EEG6 SMR:Q8EEG6 GeneID:1170131
KEGG:son:SO_2416 PATRIC:23524449 Uniprot:Q8EEG6
Length = 376
Score = 96 (38.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 29/118 (24%), Positives = 50/118 (42%)
Query: 7 EPLLAPNPDRFCMFPIQYPQIWE-MYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVT 65
EP+ + Q +++E + +K + FW EEVD+S+D + +L EKH
Sbjct: 16 EPMFFGQSVNVARYDQQKYEVFEKLIEKQLSFFWRPEEVDVSRDKIDYNSLPDHEKHIFI 75
Query: 66 HVLAFFAASDGIVLENLAGRFMTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKD 123
L + D I + F+ V + E + E IHS Y+ ++ + D
Sbjct: 76 SNLKYQTLLDSIQGRSPNVAFLPLVSLPELETWIETWSFSETIHSRSYTHIIRNIVND 133
Score = 95 (38.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 33/140 (23%), Positives = 64/140 (45%)
Query: 161 LIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLR--- 217
+++ +E I F SF F +R LM G LI+RDE LH + + ++++
Sbjct: 198 MMSVNALEAIRFYVSFACSFAFAERKLMEGNAKIIRLIARDEALHLNSTQHILTIMQGGK 257
Query: 218 --TKLSEERVKA------LVKEAVEIEREFVCDALPC-ALVGMNGELMSQYIEFVAD-RX 267
++ E ++ L +A E E+E+ +++G+N +++ QY+E++ + R
Sbjct: 258 DDPEMGEIAIECQQEAYNLFLKAAEQEKEWAKYLFKDGSMIGLNEQILCQYVEYITNQRM 317
Query: 268 XXXXXXXXXXXVANPFDWME 287
NP WM+
Sbjct: 318 KSVNLPQPYAEQTNPLPWMK 337
>UNIPROTKB|Q50549 [details] [associations]
symbol:nrdF2 "Ribonucleoside-diphosphate reductase subunit
beta nrdF2" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR000358
InterPro:IPR009078 InterPro:IPR012348 InterPro:IPR026023
InterPro:IPR026494 Pfam:PF00268 PIRSF:PIRSF000355 PROSITE:PS00368
UniPathway:UPA00326 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0006260
GO:GO:0046914 EMBL:BX842581 SUPFAM:SSF47240 Gene3D:1.10.620.20
GO:GO:0009263 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 EMBL:U41100 PIR:C70861
RefSeq:NP_337650.1 RefSeq:YP_006516508.1 RefSeq:YP_177921.1
PDB:1UZR PDBsum:1UZR ProteinModelPortal:Q50549 SMR:Q50549
PRIDE:Q50549 EnsemblBacteria:EBMYCT00000001867
EnsemblBacteria:EBMYCT00000069712 GeneID:13317851 GeneID:888886
GeneID:922702 KEGG:mtc:MT3133 KEGG:mtu:Rv3048c KEGG:mtv:RVBD_3048c
PATRIC:18128652 TubercuList:Rv3048c HOGENOM:HOG000246153 KO:K00526
OMA:IGYKYQR ProtClustDB:PRK13966 EvolutionaryTrace:Q50549
TIGRFAMs:TIGR04171 Uniprot:Q50549
Length = 324
Score = 143 (55.4 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 45/178 (25%), Positives = 75/178 (42%)
Query: 29 EMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMT 88
E++ + +FW E+V +S D+ W LTA EK V D I A +
Sbjct: 26 EVWDRLTGNFWLPEKVPVSNDIPSWGTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIP 85
Query: 89 EVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATWAL 148
+ A +E++H++ YS + T + E + F E + +KA L
Sbjct: 86 DALTPHEEAVLTNIAFMESVHAKSYSQIFSTLCSTA-EIDDAFRWSEENRNLQRKAEIVL 144
Query: 149 NWIDGSETFAERLIAFACVEG-IFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLH 205
+ G E +R +A +E +F+SG + ++W R + LI RDE +H
Sbjct: 145 QYYRGDEPL-KRKVASTLLESFLFYSGFYLPMYW-SSRAKLTNTADMIRLIIRDEAVH 200
>UNIPROTKB|P37146 [details] [associations]
symbol:nrdF species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=ISA] [GO:0004748
"ribonucleoside-diphosphate reductase activity, thioredoxin
disulfide as acceptor" evidence=IEA;IGI] [GO:0005971
"ribonucleoside-diphosphate reductase complex" evidence=IEA;IGI]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=IEA;IGI] [GO:0005506 "iron ion binding" evidence=ISA]
[GO:0009186 "deoxyribonucleoside diphosphate metabolic process"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 InterPro:IPR026023 InterPro:IPR026494
Pfam:PF00268 PIRSF:PIRSF000355 PROSITE:PS00368 UniPathway:UPA00326
GO:GO:0005506 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006260 GO:GO:0030145 SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0009263 PDB:3N39 PDB:3N3A PDB:3N3B
PDBsum:3N39 PDBsum:3N3A PDBsum:3N3B GO:GO:0005971 GO:GO:0004748
EMBL:M24856 GO:GO:0009186 eggNOG:COG0208 PANTHER:PTHR23409
HOGENOM:HOG000246153 KO:K00526 TIGRFAMs:TIGR04171 PIR:E65047
RefSeq:NP_417162.1 RefSeq:YP_490891.1 PDB:3N37 PDB:3N38 PDBsum:3N37
PDBsum:3N38 ProteinModelPortal:P37146 SMR:P37146 DIP:DIP-374N
IntAct:P37146 PRIDE:P37146 EnsemblBacteria:EBESCT00000000726
EnsemblBacteria:EBESCT00000015330 GeneID:12933275 GeneID:947149
KEGG:ecj:Y75_p2619 KEGG:eco:b2676 PATRIC:32120742 EchoBASE:EB2283
EcoGene:EG12381 OMA:YYQADEP ProtClustDB:PRK09614
BioCyc:EcoCyc:NRDF-MONOMER BioCyc:ECOL316407:JW2651-MONOMER
BioCyc:MetaCyc:NRDF-MONOMER EvolutionaryTrace:P37146
Genevestigator:P37146 Uniprot:P37146
Length = 319
Score = 136 (52.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 44/195 (22%), Positives = 79/195 (40%)
Query: 29 EMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGR--F 86
E++ + ++FW E+V LS D+ W+ LT E+ V D L+N+ G
Sbjct: 21 EVWNRLTSNFWLPEKVPLSNDIPAWQTLTVVEQQLTMRVFTGLTLLD--TLQNVIGAPSL 78
Query: 87 MTEVQVAEARAFYGFQIAIENIHSEMYSLLLETYIKDSDEKNRLFHAIETVPCVAKKATW 146
M + A +E +H+ YS + T + D + E P + +KA
Sbjct: 79 MPDALTPHEEAVLSNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAP-LQRKAQI 137
Query: 147 ALNWIDGSETFAERLIAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHC 206
G + +++ + +F+SG + +++ RG + LI RDE +H
Sbjct: 138 IQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYF-SSRGKLTNTADLIRLIIRDEAVHG 196
Query: 207 DFACLLYSLLRTKLS 221
+ Y K+S
Sbjct: 197 YYIGYKYQKNMEKIS 211
>UNIPROTKB|P96416 [details] [associations]
symbol:nrdB "R2-like ligand binding oxidase" species:1773
"Mycobacterium tuberculosis" [GO:0005506 "iron ion binding"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016491
"oxidoreductase activity" evidence=IDA] [GO:0030145 "manganese ion
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0055114 "oxidation-reduction process"
evidence=IDA] InterPro:IPR000358 InterPro:IPR009078
InterPro:IPR012348 Pfam:PF00268 GO:GO:0005829 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0005506
GO:GO:0016491 EMBL:BX842572 GO:GO:0030145 SUPFAM:SSF47240
Gene3D:1.10.620.20 GO:GO:0005971 GO:GO:0004748 GO:GO:0009186
eggNOG:COG0208 PANTHER:PTHR23409 KO:K00526 PIR:G70962
RefSeq:NP_214747.1 RefSeq:NP_334650.1 RefSeq:YP_006513556.1
PDB:3EE4 PDB:4AC8 PDBsum:3EE4 PDBsum:4AC8 ProteinModelPortal:P96416
SMR:P96416 PRIDE:P96416 EnsemblBacteria:EBMYCT00000001497
EnsemblBacteria:EBMYCT00000070603 GeneID:13316219 GeneID:886699
GeneID:923141 KEGG:mtc:MT0244 KEGG:mtu:Rv0233 KEGG:mtv:RVBD_0233
PATRIC:18122257 TubercuList:Rv0233 HOGENOM:HOG000220940 OMA:FCFEEAK
ProtClustDB:PRK08326 EvolutionaryTrace:P96416 Uniprot:P96416
Length = 314
Score = 113 (44.8 bits), Expect = 0.00061, P = 0.00061
Identities = 45/189 (23%), Positives = 85/189 (44%)
Query: 29 EMYKKAEASFWTAEEVDLSQDLRHWEALTADEKHFVTHVLAFFAASDGIVLENLAGRFMT 88
+++ A FW ++D ++D WE L+ DE+ + T + F A + V E++ FM+
Sbjct: 22 KLFAGGNAKFWHPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQP-FMS 80
Query: 89 EVQVAEARA---FYGFQIAIENI-HSEMYSLLLETYIKDSDEKNRLFHAIETVPCVA-KK 143
++ AE R Y Q A E H++++ + L+ + S++ +R + + +
Sbjct: 81 AMR-AEGRLADEMYLTQFAFEEAKHTQVFRMWLDA-VGISEDLHRYLDDLPAYRQIFYAE 138
Query: 144 ATWALNWIDGSETFAERLIAFAC----VEGIFFSGSFCAIFWLK---KRGLMPGLTFSNE 196
LN + + A ++ A VEG+ + A W K +R ++PG+
Sbjct: 139 LPECLNALSADPSPAAQVRASVTYNHIVEGMLALTGYYA--WHKICVERAILPGMQELVR 196
Query: 197 LISRDEGLH 205
I DE H
Sbjct: 197 RIGDDERRH 205
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 329 317 0.00083 116 3 11 22 0.48 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 61
No. of states in DFA: 619 (66 KB)
Total size of DFA: 244 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.71u 0.07s 25.78t Elapsed: 00:00:01
Total cpu time: 25.72u 0.07s 25.79t Elapsed: 00:00:01
Start: Fri May 10 19:04:30 2013 End: Fri May 10 19:04:31 2013